Psyllid ID: psy11018

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-
Protein Sequence
MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFKRLKYRTGNFSAYFSLGPVLKRVFGTEFFPSAIVVPPVTQPFHCVQIRLFTTGDTITTVPLRADTLVPPMTQPFG
Secondary Structure (PSIPRED)
ccccccccEEEEEEccccEEEEEcHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccccccccccccccccEEEEEEEcccEEEEEEEEEEccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHEEEEEEEcccccEEcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHEHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHcccccccEccccccccccccccccc
Coil and Loop (DISEMBL)
MAEAHSAVAFSFRithegwdvnfdREVLHLVWNSGVRSWKKRLARFKRLkyrtgnfsayfslgpvlkrvfgteffpsaivvppvtqpfhcvqirlfttgdtittvplradtlvppmtqpfg
Flexible Loop (DISEMBL)
maeahsavafsfrithegwdvNFDREVLHLVwnsgvrswkkRLARFKrlkyrtgnfsayfslGPVLKRVFGTEFFPSAIVVPPVTQPFHCVQIRLFttgdtittvplradtlvppmtqpfg
Low Complexity Region (SEG)
MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFKRLKYRTGNFSAYFSLGPVLKRVFGTEFFPSAIVVPPVTQPFHCVQIRLFTTGDTITTVPLRADTLVPPMTQPFG
Disordered region (IsUnstruct)
******AVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFKRLKYRTGNFSAYFSLGPVLKRVFGTEFFPSAIVVPPVTQPFHCVQIRLFTTGDTITTVPLRADTL*********
Disordered Region (DISOPRED)
***AHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFKRLKYRTGNFSAYFSLGPVLKRVFGTEFFPSAIVVPPVTQPFHCVQIRLFTTGDTITTVPLRADTLVPP******
Disordered Region (DISEMBL)
MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFKRLKYRTGNFSAYFSLGPVLKRVFGTEFFPSAIVVPPVTQPFHCVQIRLFTTGDTITTVPLRADTLVPPMTQPFG
Disordered Region (DISPRO)
*A*AHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFKRLKYRTGNFSAYFSLGPVLKRVFGTEFFPSAIVVPPVTQPFHCVQIRLFTTGDTITTVPLRADTLVPPMT****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFKRLKYRTGNFSAYFSLGPVLKRVFGTEFFPSAIVVPPVTQPFHCVQIRLFTTGDTITTVPLRADTLVPPMTQPFG
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	121	2.2.26 [Sep-21-2011]
Q58DK1	771	Carnitine O-palmitoyltran	yes	N/A	0.388	0.060	0.595	4e-08
Q92523	772	Carnitine O-palmitoyltran	yes	N/A	0.388	0.060	0.574	4e-08
Q8HY46	772	Carnitine O-palmitoyltran	yes	N/A	0.388	0.060	0.574	5e-08
Q63704	772	Carnitine O-palmitoyltran	yes	N/A	0.388	0.060	0.553	1e-07
Q924X2	772	Carnitine O-palmitoyltran	yes	N/A	0.388	0.060	0.553	1e-07
P50416	773	Carnitine O-palmitoyltran	no	N/A	0.388	0.060	0.510	5e-07
P97742	773	Carnitine O-palmitoyltran	no	N/A	0.388	0.060	0.510	1e-06
P32198	773	Carnitine O-palmitoyltran	no	N/A	0.388	0.060	0.510	2e-06
Q68Y62	776	Carnitine O-palmitoyltran	no	N/A	0.388	0.060	0.510	2e-06
Q8TCG5	803	Carnitine O-palmitoyltran	no	N/A	0.471	0.070	0.448	5e-05

>sp|Q58DK1|CPT1B_BOVIN Carnitine O-palmitoyltransferase 1, muscle isoform OS=Bos taurus GN=CPT1B PE=2 SV=1

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 32/47 (68%)

Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFK 47
          MAEAH AVAF F +T EG D    REVL  ++ S +RSWKKRL R K
Sbjct: 1  MAEAHQAVAFQFTVTPEGVDFQLSREVLKHIYLSVIRSWKKRLIRIK 47

Bos taurus (taxid: 9913)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 2EC: 1

>sp|Q92523|CPT1B_HUMAN Carnitine O-palmitoyltransferase 1, muscle isoform OS=Homo sapiens GN=CPT1B PE=2 SV=2

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/47 (57%), Positives = 31/47 (65%)

Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFK 47
          MAEAH AVAF F +T +G D    RE L  V+ SG+ SWKKRL R K
Sbjct: 1  MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIK 47

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 1

>sp|Q8HY46|CPT1B_PIG Carnitine O-palmitoyltransferase 1, muscle isoform OS=Sus scrofa GN=CPT1B PE=2 SV=1

 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/47 (57%), Positives = 31/47 (65%)

Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFK 47
          MAEAH AVAF F +T EG D    RE L  ++ SG+ SWKKRL R K
Sbjct: 1  MAEAHQAVAFQFTVTPEGVDFRLSREALKHIYLSGINSWKKRLIRIK 47

Sus scrofa (taxid: 9823)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 1

>sp|Q63704|CPT1B_RAT Carnitine O-palmitoyltransferase 1, muscle isoform OS=Rattus norvegicus GN=Cpt1b PE=1 SV=1

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/47 (55%), Positives = 31/47 (65%)

Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFK 47
          MAEAH AVAF F +T +G D    RE L  ++ SG+ SWKKRL R K
Sbjct: 1  MAEAHQAVAFQFTVTPDGVDFRLSREALRHIYLSGINSWKKRLIRIK 47

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 1

>sp|Q924X2|CPT1B_MOUSE Carnitine O-palmitoyltransferase 1, muscle isoform OS=Mus musculus GN=Cpt1b PE=2 SV=1

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/47 (55%), Positives = 31/47 (65%)

Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFK 47
          MAEAH AVAF F +T +G D    RE L  ++ SG+ SWKKRL R K
Sbjct: 1  MAEAHQAVAFQFTVTPDGVDFRLSREALRHIYLSGINSWKKRLIRIK 47

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 1

>sp|P50416|CPT1A_HUMAN Carnitine O-palmitoyltransferase 1, liver isoform OS=Homo sapiens GN=CPT1A PE=1 SV=2

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 31/47 (65%)

Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFK 47
          MAEAH AVAF F +T +G D+    E L  ++ SG+ SWKK+  RFK
Sbjct: 1  MAEAHQAVAFQFTVTPDGIDLRLSHEALRQIYLSGLHSWKKKFIRFK 47

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 1

>sp|P97742|CPT1A_MOUSE Carnitine O-palmitoyltransferase 1, liver isoform OS=Mus musculus GN=Cpt1a PE=1 SV=4

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 30/47 (63%)

Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFK 47
          MAEAH AVAF F +T +G D+    E L  +  SG+ SWKK+  RFK
Sbjct: 1  MAEAHQAVAFQFTVTPDGIDLRLSHEALKQICLSGLHSWKKKFIRFK 47

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 1

>sp|P32198|CPT1A_RAT Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus GN=Cpt1a PE=1 SV=2

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 30/47 (63%)

Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFK 47
          MAEAH AVAF F +T +G D+    E L  +  SG+ SWKK+  RFK
Sbjct: 1  MAEAHQAVAFQFTVTPDGIDLRLSHEALKQICLSGLHSWKKKFIRFK 47

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 1

>sp|Q68Y62|CPT1A_HORSE Carnitine O-palmitoyltransferase 1, liver isoform OS=Equus caballus GN=CPT1A PE=2 SV=1

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 30/47 (63%)

Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFK 47
          MAEAH AVAF F +T +G D+    E L  +  SG+ SWKK+  RFK
Sbjct: 1  MAEAHQAVAFQFTVTPDGIDLRLSHEALKQICLSGLHSWKKKFIRFK 47

Equus caballus (taxid: 9796)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 1

>sp|Q8TCG5|CPT1C_HUMAN Carnitine O-palmitoyltransferase 1, brain isoform OS=Homo sapiens GN=CPT1C PE=2 SV=1

 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFKRLKYRTGNFSA 58
          MAEAH AV F   +T +G +V     VL  ++ SG+RSWK+ L+RF    + TG F A
Sbjct: 1  MAEAHQAVGFRPSLTSDGAEVELSAPVLQEIYLSGLRSWKRHLSRFWN-DFLTGVFPA 57

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
328724438	771	PREDICTED: carnitine O-palmitoyltransfer	0.471	0.073	0.827	8e-20
328724436	772	PREDICTED: carnitine O-palmitoyltransfer	0.471	0.073	0.827	8e-20
328724434	793	PREDICTED: carnitine O-palmitoyltransfer	0.471	0.071	0.827	8e-20
189235959	770	PREDICTED: similar to carnitine o-acyltr	0.388	0.061	0.893	8e-19
270003254	772	hypothetical protein TcasGA2_TC002462 [T	0.388	0.060	0.893	8e-19
328776311	793	PREDICTED: LOW QUALITY PROTEIN: carnitin	0.471	0.071	0.758	3e-18
242003886	769	carnitine palmitoyltransferase I, putati	0.388	0.061	0.893	3e-18
350399244	798	PREDICTED: carnitine O-palmitoyltransfer	0.471	0.071	0.758	3e-18
380026946	798	PREDICTED: carnitine O-palmitoyltransfer	0.471	0.071	0.758	3e-18
340727812	798	PREDICTED: carnitine O-palmitoyltransfer	0.471	0.071	0.758	3e-18

>gi|328724438|ref|XP_003248148.1| PREDICTED: carnitine O-palmitoyltransferase 1, liver isoform-like isoform 3 [Acyrthosiphon pisum]

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 48/58 (82%), Positives = 49/58 (84%), Gaps = 1/58 (1%)

Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFKRLKYRTGNFSA 58
          MAEAHSAVAFSF ITHEGWDVNFDREVLHLVW SG+RSWKKRLARFK    R G F A
Sbjct: 1  MAEAHSAVAFSFSITHEGWDVNFDREVLHLVWASGIRSWKKRLARFKN-NVRNGVFPA 57

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328724436|ref|XP_001945329.2| PREDICTED: carnitine O-palmitoyltransferase 1, liver isoform-like isoform 1 [Acyrthosiphon pisum]

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 48/58 (82%), Positives = 49/58 (84%), Gaps = 1/58 (1%)

Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFKRLKYRTGNFSA 58
          MAEAHSAVAFSF ITHEGWDVNFDREVLHLVW SG+RSWKKRLARFK    R G F A
Sbjct: 1  MAEAHSAVAFSFSITHEGWDVNFDREVLHLVWASGIRSWKKRLARFKN-NVRNGVFPA 57

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328724434|ref|XP_003248147.1| PREDICTED: carnitine O-palmitoyltransferase 1, liver isoform-like isoform 2 [Acyrthosiphon pisum]

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 48/58 (82%), Positives = 49/58 (84%), Gaps = 1/58 (1%)

Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFKRLKYRTGNFSA 58
          MAEAHSAVAFSF ITHEGWDVNFDREVLHLVW SG+RSWKKRLARFK    R G F A
Sbjct: 1  MAEAHSAVAFSFSITHEGWDVNFDREVLHLVWASGIRSWKKRLARFKN-NVRNGVFPA 57

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189235959|ref|XP_969183.2| PREDICTED: similar to carnitine o-acyltransferase [Tribolium castaneum]

 Score = 97.8 bits (242), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 42/47 (89%), Positives = 45/47 (95%)

Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFK 47
          MAEAHSAVAFSF ITHEGWDVNFDREVLHLVW SG+RSWKKR+ARF+
Sbjct: 1  MAEAHSAVAFSFSITHEGWDVNFDREVLHLVWQSGIRSWKKRIARFQ 47

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270003254|gb|EEZ99701.1| hypothetical protein TcasGA2_TC002462 [Tribolium castaneum]

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 42/47 (89%), Positives = 45/47 (95%)

Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFK 47
          MAEAHSAVAFSF ITHEGWDVNFDREVLHLVW SG+RSWKKR+ARF+
Sbjct: 1  MAEAHSAVAFSFSITHEGWDVNFDREVLHLVWQSGIRSWKKRIARFQ 47

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328776311|ref|XP_623091.2| PREDICTED: LOW QUALITY PROTEIN: carnitine O-palmitoyltransferase 1, liver isoform [Apis mellifera]

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/58 (75%), Positives = 47/58 (81%), Gaps = 1/58 (1%)

Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFKRLKYRTGNFSA 58
          MAEAHSAVAFSF ITHEGWDVNFDREVLHLVW SG+RSWKKR  RF     R+G + A
Sbjct: 1  MAEAHSAVAFSFSITHEGWDVNFDREVLHLVWQSGIRSWKKRFFRFVN-NLRSGVYPA 57

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242003886|ref|XP_002422899.1| carnitine palmitoyltransferase I, putative [Pediculus humanus corporis] gi|212505781|gb|EEB10161.1| carnitine palmitoyltransferase I, putative [Pediculus humanus corporis]

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/47 (89%), Positives = 45/47 (95%)

Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFK 47
          MAEAHSAVAFSF ITHEGWDVNFDREVL+LVW SG+RSWKKR+ARFK
Sbjct: 1  MAEAHSAVAFSFAITHEGWDVNFDREVLNLVWASGIRSWKKRIARFK 47

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350399244|ref|XP_003485466.1| PREDICTED: carnitine O-palmitoyltransferase 1, liver isoform-like isoform 2 [Bombus impatiens]

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/58 (75%), Positives = 47/58 (81%), Gaps = 1/58 (1%)

Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFKRLKYRTGNFSA 58
          MAEAHSAVAFSF ITHEGWDVNFDREVLHLVW SG+RSWKKR  RF     R+G + A
Sbjct: 1  MAEAHSAVAFSFSITHEGWDVNFDREVLHLVWQSGIRSWKKRFFRFVN-NLRSGVYPA 57

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380026946|ref|XP_003697199.1| PREDICTED: carnitine O-palmitoyltransferase 1, liver isoform-like [Apis florea]

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/58 (75%), Positives = 47/58 (81%), Gaps = 1/58 (1%)

Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFKRLKYRTGNFSA 58
          MAEAHSAVAFSF ITHEGWDVNFDREVLHLVW SG+RSWKKR  RF     R+G + A
Sbjct: 1  MAEAHSAVAFSFSITHEGWDVNFDREVLHLVWQSGIRSWKKRFFRFVN-NLRSGVYPA 57

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340727812|ref|XP_003402229.1| PREDICTED: carnitine O-palmitoyltransferase 1, liver isoform-like isoform 2 [Bombus terrestris]

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/58 (75%), Positives = 47/58 (81%), Gaps = 1/58 (1%)

Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFKRLKYRTGNFSA 58
          MAEAHSAVAFSF ITHEGWDVNFDREVLHLVW SG+RSWKKR  RF     R+G + A
Sbjct: 1  MAEAHSAVAFSFSITHEGWDVNFDREVLHLVWQSGIRSWKKRFFRFVN-NLRSGVYPA 57

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
FB|FBgn0261862	782	whd "withered" [Drosophila mel	0.603	0.093	0.613	1.8e-16
UNIPROTKB|C9J7C3	125	CPT1B "Carnitine O-palmitoyltr	0.388	0.376	0.574	4.7e-09
UNIPROTKB|Q9Z2G4	163	Cpt1b "Carnitine O-palmitoyltr	0.388	0.288	0.553	4.7e-09
UNIPROTKB|K7GN50	185	K7GN50 "Uncharacterized protei	0.471	0.308	0.482	9.7e-09
ZFIN|ZDB-GENE-041010-9	770	cpt1b "carnitine palmitoyltran	0.471	0.074	0.534	1.1e-08
UNIPROTKB|H3BP22	118	CPT1A "Carnitine O-palmitoyltr	0.388	0.398	0.510	1.6e-08
UNIPROTKB|H3BUJ0	93	CPT1A "Carnitine O-palmitoyltr	0.388	0.505	0.510	1.6e-08
UNIPROTKB|H3BUV7	134	CPT1A "Carnitine O-palmitoyltr	0.388	0.350	0.510	1.6e-08
UNIPROTKB|I3LV35	467	CPT1B "Carnitine O-palmitoyltr	0.388	0.100	0.574	2.4e-08
UNIPROTKB|Q58DK1	771	CPT1B "Carnitine O-palmitoyltr	0.388	0.060	0.595	5e-08

FB|FBgn0261862 whd "withered" [Drosophila melanogaster (taxid:7227)]

 Score = 215 (80.7 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 46/75 (61%), Positives = 54/75 (72%)

Query:     1 MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFKRLKYRTGNFSAYF 60
             MAEAH+AVAFSF ITHEG+D+N+D EVL+LVWNSGVRSWKKRLAR  R   R G + A+ 
Sbjct:     1 MAEAHAAVAFSFAITHEGFDINYDHEVLNLVWNSGVRSWKKRLAR-ARNGVRNGVYPAHI 59

Query:    61 -SLGPVLKRVFGTEF 74
              SL  +     G  F
Sbjct:    60 QSLWLISAIALGLHF 74

GO:0004095 "carnitine O-palmitoyltransferase activity" evidence=ISS;NAS

GO:0005739 "mitochondrion" evidence=ISS

GO:0010038 "response to metal ion" evidence=IMP

GO:0042594 "response to starvation" evidence=IMP

GO:0006979 "response to oxidative stress" evidence=IMP

UNIPROTKB|C9J7C3 CPT1B "Carnitine O-palmitoyltransferase 1, muscle isoform" [Homo sapiens (taxid:9606)]

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 27/47 (57%), Positives = 31/47 (65%)

Query:     1 MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFK 47
             MAEAH AVAF F +T +G D    RE L  V+ SG+ SWKKRL R K
Sbjct:     1 MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIK 47

GO:0004095 "carnitine O-palmitoyltransferase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0015909 "long-chain fatty acid transport" evidence=IEA

UNIPROTKB|Q9Z2G4 Cpt1b "Carnitine O-palmitoyltransferase 1, muscle isoform" [Rattus norvegicus (taxid:10116)]

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 26/47 (55%), Positives = 31/47 (65%)

Query:     1 MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFK 47
             MAEAH AVAF F +T +G D    RE L  ++ SG+ SWKKRL R K
Sbjct:     1 MAEAHQAVAFQFTVTPDGVDFRLSREALRHIYLSGINSWKKRLIRIK 47

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

UNIPROTKB|K7GN50 K7GN50 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 28/58 (48%), Positives = 35/58 (60%)

Query:     1 MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFKRLKYRTGNFSA 58
             MAEAH AVAF F +T +G D+    E L  ++ SG+ SWKK+  RFK     TG F A
Sbjct:     1 MAEAHQAVAFQFTVTPDGIDLRMSHEALRQIYLSGLHSWKKKFIRFKN-GIITGVFPA 57

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

ZFIN|ZDB-GENE-041010-9 cpt1b "carnitine palmitoyltransferase 1B (muscle)" [Danio rerio (taxid:7955)]

 Score = 142 (55.0 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 31/58 (53%), Positives = 37/58 (63%)

Query:     1 MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFKRLKYRTGNFSA 58
             MAEAH AVAF F +T +G D+   REVL  ++ SGV SWKKR  RFK     TG + A
Sbjct:     1 MAEAHQAVAFQFTVTPDGIDLQLSREVLKHIYISGVTSWKKRAIRFKN-SVLTGVYPA 57

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009617 "response to bacterium" evidence=IDA

GO:0016740 "transferase activity" evidence=IEA

UNIPROTKB|H3BP22 CPT1A "Carnitine O-palmitoyltransferase 1, liver isoform" [Homo sapiens (taxid:9606)]

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 24/47 (51%), Positives = 31/47 (65%)

Query:     1 MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFK 47
             MAEAH AVAF F +T +G D+    E L  ++ SG+ SWKK+  RFK
Sbjct:     1 MAEAHQAVAFQFTVTPDGIDLRLSHEALRQIYLSGLHSWKKKFIRFK 47

GO:0001676 "long-chain fatty acid metabolic process" evidence=IEA

GO:0004095 "carnitine O-palmitoyltransferase activity" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0006006 "glucose metabolic process" evidence=IEA

GO:0006641 "triglyceride metabolic process" evidence=IEA

GO:0014070 "response to organic cyclic compound" evidence=IEA

GO:0031307 "integral to mitochondrial outer membrane" evidence=IEA

GO:0032000 "positive regulation of fatty acid beta-oxidation" evidence=IEA

GO:0042493 "response to drug" evidence=IEA

GO:0042755 "eating behavior" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0050796 "regulation of insulin secretion" evidence=IEA

GO:0051260 "protein homooligomerization" evidence=IEA

UNIPROTKB|H3BUJ0 CPT1A "Carnitine O-palmitoyltransferase 1, liver isoform" [Homo sapiens (taxid:9606)]

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 24/47 (51%), Positives = 31/47 (65%)

Query:     1 MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFK 47
             MAEAH AVAF F +T +G D+    E L  ++ SG+ SWKK+  RFK
Sbjct:     1 MAEAHQAVAFQFTVTPDGIDLRLSHEALRQIYLSGLHSWKKKFIRFK 47

GO:0001676 "long-chain fatty acid metabolic process" evidence=IEA

GO:0004095 "carnitine O-palmitoyltransferase activity" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0006006 "glucose metabolic process" evidence=IEA

GO:0006641 "triglyceride metabolic process" evidence=IEA

GO:0014070 "response to organic cyclic compound" evidence=IEA

GO:0031307 "integral to mitochondrial outer membrane" evidence=IEA

GO:0032000 "positive regulation of fatty acid beta-oxidation" evidence=IEA

GO:0042493 "response to drug" evidence=IEA

GO:0042755 "eating behavior" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0050796 "regulation of insulin secretion" evidence=IEA

GO:0051260 "protein homooligomerization" evidence=IEA

UNIPROTKB|H3BUV7 CPT1A "Carnitine O-palmitoyltransferase 1, liver isoform" [Homo sapiens (taxid:9606)]

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 24/47 (51%), Positives = 31/47 (65%)

Query:     1 MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFK 47
             MAEAH AVAF F +T +G D+    E L  ++ SG+ SWKK+  RFK
Sbjct:     1 MAEAHQAVAFQFTVTPDGIDLRLSHEALRQIYLSGLHSWKKKFIRFK 47

GO:0001676 "long-chain fatty acid metabolic process" evidence=IEA

GO:0004095 "carnitine O-palmitoyltransferase activity" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0006006 "glucose metabolic process" evidence=IEA

GO:0006641 "triglyceride metabolic process" evidence=IEA

GO:0014070 "response to organic cyclic compound" evidence=IEA

GO:0031307 "integral to mitochondrial outer membrane" evidence=IEA

GO:0032000 "positive regulation of fatty acid beta-oxidation" evidence=IEA

GO:0042493 "response to drug" evidence=IEA

GO:0042755 "eating behavior" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0050796 "regulation of insulin secretion" evidence=IEA

GO:0051260 "protein homooligomerization" evidence=IEA

UNIPROTKB|I3LV35 CPT1B "Carnitine O-palmitoyltransferase 1, muscle isoform" [Sus scrofa (taxid:9823)]

 Score = 136 (52.9 bits), Expect = 2.4e-08, P = 2.4e-08
 Identities = 27/47 (57%), Positives = 31/47 (65%)

Query:     1 MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFK 47
             MAEAH AVAF F +T EG D    RE L  ++ SG+ SWKKRL R K
Sbjct:     1 MAEAHQAVAFQFTVTPEGVDFRLSREALKHIYLSGINSWKKRLIRIK 47

GO:0005739 "mitochondrion" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

UNIPROTKB|Q58DK1 CPT1B "Carnitine O-palmitoyltransferase 1, muscle isoform" [Bos taurus (taxid:9913)]

 Score = 136 (52.9 bits), Expect = 5.0e-08, P = 5.0e-08
 Identities = 28/47 (59%), Positives = 32/47 (68%)

Query:     1 MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFK 47
             MAEAH AVAF F +T EG D    REVL  ++ S +RSWKKRL R K
Sbjct:     1 MAEAHQAVAFQFTVTPEGVDFQLSREVLKHIYLSVIRSWKKRLIRIK 47

GO:0006635 "fatty acid beta-oxidation" evidence=IEA

GO:0005741 "mitochondrial outer membrane" evidence=IEA

GO:0004095 "carnitine O-palmitoyltransferase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	121
KOG3716|consensus	764		99.89

>KOG3716|consensus

Probab=99.89  E-value=2.2e-25  Score=201.07  Aligned_cols=101  Identities=35%  Similarity=0.423  Sum_probs=92.7

Q ss_pred             CccccccceeeeeeeCCceeeeeCHHHHHHHHHHhhHhHHHhHhhhhccccccceeccc-chhhhhHHhhhhhcccccCc
Q psy11018          1 MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKRLARFKRLKYRTGNFSAY-FSLGPVLKRVFGTEFFPSAI   79 (121)
Q Consensus         1 MAEAHqAVaFqFtvT~dGidv~~s~EaL~~I~~SgvRSWKKRl~RFkN~~iltGVyPAs-~SwlfVv~ai~~~~~~~~d~   79 (121)
                      ||||||||||||+|||+|.|++.++|+++.+|++|++|||||+.|++| ++.|||||++ .||++++++|++++|.+.||
T Consensus         1 maeah~av~f~~~vt~~~~~~~~~~~~~~~~~ls~~~sw~~~~~r~~N-~~~~~v~P~~P~s~l~~~~~i~~~~~~~~d~   79 (764)
T KOG3716|consen    1 MAEAHQAVAFQFTVTPMGPDLNKSLEALPYPYLSGFPSWKERLYRTYN-GIENGVWPASPISFLALTFAIIGTSFLKYDP   79 (764)
T ss_pred             CcccccceeeeeeeccCchhhhhccccccccccccCchHHHHHHHHHH-HHHhccCCCCchhHHHHHHHHHHHHHhcCCc
Confidence            999999999999999999999999999999999999999999999999 9999999999 99999999999999999999


Q ss_pred             cCCCCCCcceeccce------------eeccCceEEeeec
Q psy11018         80 VVPPVTQPFHCVQIR------------LFTTGDTITTVPL  107 (121)
Q Consensus        80 s~~~~~~i~~~~~~~------------l~tt~~~~~~~~~  107 (121)
                      |+|+     .+||..            |+.+|.|.+.|-+
T Consensus        80 ~lgl-----~~Lp~~~~~~~~~l~s~~i~~~~~w~~vi~~  114 (764)
T KOG3716|consen   80 SLGL-----RLLPKFQSEQARLLKSLAIFATGLWLTVIFL  114 (764)
T ss_pred             cccc-----ccccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9998     556655            5566777665543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	121
2le3_A	42	N-Terminal Regulatory Segment Of Carnitine Palmitoy		2e-06

>pdb|2LE3|A Chain A, N-Terminal Regulatory Segment Of Carnitine Palmitoyltransferase 1a Length = 42

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKR 42
          MAEAH AVAF F +T +G D+    E L  ++ SG+ SWKK+
Sbjct: 1  MAEAHQAVAFQFTVTPDGIDLRLSHEALRQIYLSGLHSWKKK 42

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	121
2le3_A	42	Carnitine O-palmitoyltransferase 1, liver isoform;	3e-21

>2le3_A Carnitine O-palmitoyltransferase 1, liver isoform; membrane protein, amphiphilic structure, membrane-protein interaction, structural switch; NMR {Homo sapiens} Length = 42

 Score = 78.9 bits (194), Expect = 3e-21
 Identities = 21/42 (50%), Positives = 28/42 (66%)

Query: 1  MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKR 42
          MAEAH AVAF F +T +G D+    E L  ++ SG+ SWKK+
Sbjct: 1  MAEAHQAVAFQFTVTPDGIDLRLSHEALRQIYLSGLHSWKKK 42

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	121
2le3_A	42	Carnitine O-palmitoyltransferase 1, liver isoform;	99.93

>2le3_A Carnitine O-palmitoyltransferase 1, liver isoform; membrane protein, amphiphilic structure, membrane-protein interaction, structural switch; NMR {Homo sapiens}

Probab=99.93  E-value=3e-27  Score=147.97  Aligned_cols=42  Identities=50%  Similarity=0.877  Sum_probs=41.4

Q ss_pred             CccccccceeeeeeeCCceeeeeCHHHHHHHHHHhhHhHHHh
Q psy11018          1 MAEAHSAVAFSFRITHEGWDVNFDREVLHLVWNSGVRSWKKR   42 (121)
Q Consensus         1 MAEAHqAVaFqFtvT~dGidv~~s~EaL~~I~~SgvRSWKKR   42 (121)
                      ||||||||||||+|||||+|++||+|+|++||+||+||||||
T Consensus         1 MAEAhqAVaf~ftvt~eG~~~~~~~e~l~~i~~s~~rSwkkr   42 (42)
T 2le3_A            1 MAEAHQAVAFQFTVTPDGIDLRLSHEALRQIYLSGLHSWKKK   42 (42)
T ss_dssp             CCCHHHHCSEEEEEETTEEEEEECHHHHHHHHHHHHHHHSCC
T ss_pred             CchhhhhheeeeeecCCCccccccHHHHHHHHHHHHHHhhcC
Confidence            999999999999999999999999999999999999999986

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00