Psyllid ID: psy11097

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------
MNSKYLMNCIVNESLKQNMTRYRTRYKIMNSKYLMNCIVNESLKQNMTSIPWIQITDDAFIIVVNWVIEQLLDRDVINHEVVHTDNQRVIIHVKDVNDESPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSDHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAEDQNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTSILKVKATDADSGTNAEIEYHVSDDNFAVDSNGVINNHKTLDADNNNAYYEFVITAKDKDVDVELDVVDRNNKPPLWDNAIYGPIHIRENVTVSTVVTSVKARFGFVGGSTSSGQFVIEDITGVIRLNSKSISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITDVNDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFDREGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNGAIVYTLSAPYNQMDLEYFEIQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTKVVFDREKQGAYALEVEARDGAPSARPNSDGEPNSACTPLI
cccccccccEEEEEEEccccccEEEEEEEcccccccEEEEEEEccccccccEEEEccccEEEEEEEEEcccccccEEccEEEEEEEEEEEEEEEEccccccccccccccEEEEEEcccccccEEEEEEEEcccccccEEEEEEEccccccEEEEcccEEEEEccccccccccEEEEEEEEEEccccccccccccccccEEEEEccccccccccccccccccccccccccccccEEEEEEEEEEEEcccccccccccEEEEEEEcccccccEEEEEEEEEcccccccEEEEEEccccccEEEEEEEEcccccccEEEcccccEEEEcccccccccccccEEEEEEEEEEcccccEEEEEEEEEEEEccccccccccccEEEEEEccccccccEEEEEEEEEcccccccEEEEEEccccEEEcccEEEEEcccccccccccEEEEEEEEEEccEEEEEEEEEccccccEEEcccEEEEEEccccccccEEEEEEEEEcccccccccccEEEEccccEEEEccccccccccEEEEEEEEEEccccccccccccEEEEEEEEEEEEEcccccccccccccEEEEEEcccccccEEEEEEEEEcccccccEEEEEEEEccccccccEEEEccccEEEEccccccccccccEEEEEEEEEEccccccEEEEEEEEEEEEcccccccccccccEEEEccccccccEEEEEEEEEccccccEEEEEEEEccccccccccEEEEccccEEEEccccccEEEEEccccccccccEEEEccccEEEEEcccccccccEEEEEEEEEEcccccccccEEEEEEEEEEcc
cccccccccEEEEEEcccccccEEEEEEEccccccccEEEEEEEccccccEEEEcccccEEEEEEEEcccccccHHccccEEccccEEEEEEEEEccccccccccccEEEEEEEccccccccEEEEEEEEcccccccEEEEEEEcccccEEEEccccEEEEEEcccccccccEEEEEEEEEccccccccEEEEEEEEEEEEccccccccccccccccEEEEEEEEEcccccccccEEEEEEEEEEccccccccccccEEEEEccccccccEEEEEEEEccccccccEEEEEEEcccccEEEEEEEEccccccEEEEcccccEEEEEccccccccccccEEEEEEEEEccccccccEEEEEEEEEEcccccccEccccEEEEEEccccccccEEEEEEEEccccccccEEEEEEEcccEEEccccEEEEEccccccccccEEEEEEEEEccccEEEEEEEEcccccccEccccEEEEEEccccccccEEEEEEEEcccccccccEEEEEEccccEEEEEEcccccccccEEEEEEEEEcccccccccccccccEEEEEEEEEEEcccccccccccccEEEEEEcccccccEEEEccEEccccccccEEEEEEEccccccccEEEEccccEEEEEEcccccccccccEEEEEEEEEcccccccccEEEEEEEEEEccccccccccccEEEEEEcccccccEEEEEEEEccccccccEEEEEEEcccccccccEEEEcccccEEEEEEccccccccEEEEEEEcccccccccccEEEEEEEEcccccccEEEEEEEEEcccccccccEEEEEEEEEEEcc
MNSKYLMNCIVNESLKQNMTRYRTRYKIMNSKYLMNCIVNESLkqnmtsipwiqitdDAFIIVVNWVIEQLLdrdvinhevvhtdnqrVIIHvkdvndespyfinrplpmqavvqlnappntpvftlqardpdsdhniHYFIVrdrtggrfevdersgvvrtrgtdpfqldqEYVLYVKAedqngrkderkfqstpeerlsivggkrapqfympsyeaeipenqkkdteypsmtgtATVRIYTknkndeepkfsqqvytpnvdenagpntLVTTVVasdkdgdnvsIISVKAKSFADREIRYTLKaqgqgagtfnigptsGIVKLAkeldfedlrqphVYSLIVTAtedsggfstSVELTIRvtdvndnapkfelpdyqahnidedittgtsilkvkatdadsgtnaeieyhvsddnfavdsngvinnhktldadnnnAYYEFVITakdkdvdveldvvdrnnkpplwdnaiygpihirenVTVSTVVTSVKarfgfvggstssgqfviEDITGVIRLNsksisldrdkyelnvtavddgaccangdqsvHTATAVVVVFITdvndnkpvfrecstyypkveegapngspvikvhatdedkgvngQVKYSIVqqpnqkgakftvdeetgevvtnkvfdregddgkfVSVTIKatdqgepslegvcsftveitdvndnpplfdrqkYVENVkqdasigtnilrvsasdedadnngAIVYTLsapynqmdleyfeiqpesgwivlkkpldVYYYIvdsprnegkdfFEINLQSGEVFTKVVFDREKQGAYALEVeardgapsarpnsdgepnsactpli
mnskylmnCIVNESLKQNMTRYRTRYKIMNSKYLMNCIVNESLKQNMTSIPWIQITDDAFIIVVNWVIEQLLDRDVINHevvhtdnqrviiHVKDVNDESPYFINRPLPMQAVVQLNAPPNTPVFTLqardpdsdhNIHYFivrdrtggrfevdersgvvrtrgtdpfqldqeyVLYVKaedqngrkderkfqstpeerlsivggkrapQFYMPSYEAeipenqkkdteypsMTGTATVRIYTKNKNDEEPKFSQQVYtpnvdenagPNTLVTTVvasdkdgdnvsiisvkaksfadrEIRYTLkaqgqgagtfnigPTSGIVKLAKELDFEDLRQPHVYSLIVTatedsggfsTSVELTIRVTDVNDNAPkfelpdyqahnidEDITTGTSILKVKATDADSGTNAEIEYHVSDDNFAVDSNGVINnhktldadnnNAYYEFVITAKDKDVDVELDvvdrnnkpplwdnaiygpihiRENVTVSTVVTSVKARFgfvggstssgqfviedITGVIRLNSKSISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFItdvndnkpvFRECSTYypkveegapngsPVIKVHATDEDKGVNGQVKYSIvqqpnqkgakftvdeetgevvtnkvfdregddgkfVSVTIkatdqgepsleGVCSFTVEitdvndnpplFDRQKYVEnvkqdasigtnilrvsasdedadnNGAIVYTLSAPYNQMDLEYFEIQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTKVVFDREKQGAYALEVeardgapsarpnsdgepnsactpli
MNSKYLMNCIVNESLKQNMTRYRTRYKIMNSKYLMNCIVNESLKQNMTSIPWIQITDDAFIIVVNWVIEQLLDRDVINHEVVHTDNQRVIIHVKDVNDESPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSDHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAEDQNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTSILKVKATDADSGTNAEIEYHVSDDNFAVDSNGVINNHKTLDADNNNAYYEFVITAkdkdvdveldvvdRNNKPPLWDNAIYGPIHIRENvtvstvvtsvKARFGFVGGSTSSGQFVIEDITGVIRLNSKSISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITDVNDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFDREGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNGAIVYTLSAPYNQMDLEYFEIQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTKVVFDREKQGAYALEVEARDGAPSARPNSDGEPNSACTPLI
****YLMNCIVNESLKQNMTRYRTRYKIMNSKYLMNCIVNESLKQNMTSIPWIQITDDAFIIVVNWVIEQLLDRDVINHEVVHTDNQRVIIHVKDVNDESPYFINRPLPMQAVVQLNAPPNTPVFTLQA****SDHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDPFQLDQEYVLYVK******************************************************************************************TLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTSILKVKATDAD*GTNAEIEYHVSDDNFAVDSNGVINNHKTLDADNNNAYYEFVITAKDKDVDVELDVVDRNNKPPLWDNAIYGPIHIRENVTVSTVVTSVKARFGFVGGSTSSGQFVIEDITGVIRLNSKSISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITDVNDNKPVFRECSTYYPKVE************************VKYSIV****************GEVVTNKVFDREGDDGKFVSVTIKATD***PSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVS******DNNGAIVYTLSAPYNQMDLEYFEIQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTKVVFDREKQGAYAL***************************
MNSKYLMNCIVNESLKQNMTRYRTRYKIMNSKYLMNCIVNESLKQNMTSIPWIQITDDAFIIVVNWVIEQLLDRDVINHEVVHTDNQRVIIHVKDVNDESPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSDHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAEDQNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQG**AGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTSILKVKATDADSGTNAEIEYHVSDDNFAVDSNGVINNHKTLDADNNNAYYEFVITAKDKDVDVELDVVDRNNKPPLWDNAIYGPIHIRENVTVSTVVTSVKARFGFVGGSTSSGQFVIEDITGVIRLNSKSISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITDVNDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFDREGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNGAIVYTLSAPYNQMDLEYFEIQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTKVVFDREKQGAYALEVEARD**************SACTPLI
MNSKYLMNCIVNESLKQNMTRYRTRYKIMNSKYLMNCIVNESLKQNMTSIPWIQITDDAFIIVVNWVIEQLLDRDVINHEVVHTDNQRVIIHVKDVNDESPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSDHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAED*****************LSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTSILKVKATDADSGTNAEIEYHVSDDNFAVDSNGVINNHKTLDADNNNAYYEFVITAKDKDVDVELDVVDRNNKPPLWDNAIYGPIHIRENVTVSTVVTSVKARFGFVGGSTSSGQFVIEDITGVIRLNSKSISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITDVNDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFDREGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNGAIVYTLSAPYNQMDLEYFEIQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTKVVFDREKQGAYALEVEA***********************
*NSKYLMNCIVNESLKQNMTRYRTRYKIMNSKYLMNCIVNESLKQNMTSIPWIQITDDAFIIVVNWVIEQLLDRDVINHEVVHTDNQRVIIHVKDVNDESPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSDHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAEDQNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTSILKVKATDADSGTNAEIEYHVSDDNFAVDSNGVINNHKTLDADNNNAYYEFVITAKDKDVDVELDVVDRNNKPPLWDNAIYGPIHIRENVTVSTVVTSVKARFGFVGGSTSSGQFVIEDITGVIRLNSKSISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITDVNDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFDREGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNGAIVYTLSAPYNQMDLEYFEIQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTKVVFDREKQGAYALEVEARDGAPSARPNSDGEPNSACTPLI
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNSKYLMNCIVxxxxxxxxxxxxxxxxxxxxxYLMNCIVNESLKQNMTSIPWIQITDDAFIIVVNWVIEQLLDRDVINHEVVHTDNQRVIIHVKDVNDESPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSDHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAEDQNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTSILKVKATDADSGTNAEIEYHVSDDNFAVDSNGVINNHKTLDADNNNAYYEFVITAKDKDVDVELDVVDRNNKPPLWDNAIYGPIHIRENVTVSTVVTSVKARFGFVGGSTSSGQFVIEDITGVIRLNSKSISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITDVNDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFDREGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNGAIVYTLSAPYNQMDLEYFEIQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTKVVFDREKQGAYALEVEARDGAPSARPNSDGEPNSACTPLI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query817 2.2.26 [Sep-21-2011]
O15943 3097 Neural-cadherin OS=Drosop yes N/A 0.793 0.209 0.721 0.0
Q967F4 2920 Cadherin-related hmr-1 OS yes N/A 0.771 0.215 0.324 6e-76
Q9V5N8 3579 Protocadherin-like wing p no N/A 0.728 0.166 0.317 4e-59
O35161 3034 Cadherin EGF LAG seven-pa yes N/A 0.700 0.188 0.288 7e-53
Q24292 3503 Protein dachsous OS=Droso no N/A 0.740 0.172 0.287 3e-51
O88278 3313 Cadherin EGF LAG seven-pa no N/A 0.678 0.167 0.277 1e-49
Q91ZI0 3301 Cadherin EGF LAG seven-pa no N/A 0.678 0.167 0.277 3e-49
Q14517 4588 Protocadherin Fat 1 OS=Ho yes N/A 0.758 0.135 0.279 8e-49
Q9NYQ7 3312 Cadherin EGF LAG seven-pa no N/A 0.675 0.166 0.275 1e-48
Q9HCU4 2923 Cadherin EGF LAG seven-pa no N/A 0.670 0.187 0.289 5e-48
>sp|O15943|CADN_DROME Neural-cadherin OS=Drosophila melanogaster GN=CadN PE=1 SV=2 Back     alignment and function desciption
 Score = 1018 bits (2633), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/733 (72%), Positives = 584/733 (79%), Gaps = 85/733 (11%)

Query: 51   PWIQI-TDDAFIIVVNWVIEQLLDRDVINHEVV-----------HTDNQRVIIHVKDVND 98
            PW+ + T+ A  +   W  E+L     I+  V+           +TDNQRVII VKDVND
Sbjct: 479  PWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVND 538

Query: 99   ESPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSDHNIHYFIVRDRTGGRFEVDERSG 158
            E PYFINRPLPMQAVVQLNAPPNTPVFTLQARDPD+DHNIHYFIVRDRTGGRFEVDERSG
Sbjct: 539  EPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHNIHYFIVRDRTGGRFEVDERSG 598

Query: 159  VVRTRGTDPFQLDQEYVLYVKAEDQNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEA 218
            VVRTRGTD FQLD EYVLYVKAEDQNG+ D+R+FQSTPEERLSIVGGKRAPQFYMPS   
Sbjct: 599  VVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVGGKRAPQFYMPS--- 655

Query: 219  EIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVAS 278
                                                   Y   + EN             
Sbjct: 656  ---------------------------------------YEAEIPEN------------Q 664

Query: 279  DKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPH 338
             KD D   IIS+KAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPH
Sbjct: 665  KKDSD---IISIKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPH 721

Query: 339  VYSLIVTATEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTSILKVKA 398
            VYSLIVTATEDSGGFSTSV+LTIRVTDVNDNAPKFELPDYQAHN+DEDI  GTSIL+VKA
Sbjct: 722  VYSLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKA 781

Query: 399  TDADSGTNAEIEYHVSDDNFAVDSNGVINNHKTLDADNNNAYYEFVITAKDKD------- 451
             D+DSG+NAEIEY VSDD+FAVDSNG+I N+K LDADNNNAYYEF++TAKDK        
Sbjct: 782  MDSDSGSNAEIEYLVSDDHFAVDSNGIIVNNKQLDADNNNAYYEFIVTAKDKGEPPKSGV 841

Query: 452  VDVELDVVDRNNKPPLWDNAIYGPIHIRENVTVSTVVTSVKA--------RFGFVGGSTS 503
              V +   ++N++ P +   +Y P ++ EN   +T+VT+V A        RFGFVGG TS
Sbjct: 842  ATVRVYTKNKNDEEPKFSQQVYTP-NVDENAGPNTLVTTVVASDKDGDNVRFGFVGGGTS 900

Query: 504  SGQFVIEDITGVIRLNSKSISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITD 563
            SGQFVIEDITGVIRL++K+ISLD+DKYELNVTA+DDG+CC NGDQ++HT+TAVVVVFITD
Sbjct: 901  SGQFVIEDITGVIRLHNKAISLDKDKYELNVTAMDDGSCCVNGDQTIHTSTAVVVVFITD 960

Query: 564  VNDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFT 623
            VNDNKPVF++CSTYYPKVEEGAPNGSPVIKV ATDEDKGVNGQVKYSIVQQPNQKG KFT
Sbjct: 961  VNDNKPVFKDCSTYYPKVEEGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQPNQKGTKFT 1020

Query: 624  VDEETGEVVTNKVFDREGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITDVNDNPPLFDR 683
            VDEETGEV TNKVFDREGDDGKFVSVT+KATDQG+PSLEGVCSFTVEITDVNDNPPLFDR
Sbjct: 1021 VDEETGEVSTNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDR 1080

Query: 684  QKYVENVKQDASIGTNILRVSASDEDADNNGAIVYTLSAPYNQMDLEYFEIQPESGWIVL 743
            QKYVENVKQDASIGTNILRVSASDEDADNNGAIVY+L+AP+N  DLEYFEIQ ESGWIVL
Sbjct: 1081 QKYVENVKQDASIGTNILRVSASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWIVL 1140

Query: 744  KKPLDVYYYIVDS 756
            KKPLD   Y +++
Sbjct: 1141 KKPLDRETYKLEA 1153
Cadherins are calcium dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types. May associate with arm neural isoform and participate in the transmission of developmental information.
Drosophila melanogaster (taxid: 7227)
>sp|Q967F4|HMR1_CAEEL Cadherin-related hmr-1 OS=Caenorhabditis elegans GN=hmr-1 PE=1 SV=1 Back     alignment and function description
>sp|Q9V5N8|STAN_DROME Protocadherin-like wing polarity protein stan OS=Drosophila melanogaster GN=stan PE=1 SV=4 Back     alignment and function description
>sp|O35161|CELR1_MOUSE Cadherin EGF LAG seven-pass G-type receptor 1 OS=Mus musculus GN=Celsr1 PE=2 SV=3 Back     alignment and function description
>sp|Q24292|DS_DROME Protein dachsous OS=Drosophila melanogaster GN=ds PE=1 SV=3 Back     alignment and function description
>sp|O88278|CELR3_RAT Cadherin EGF LAG seven-pass G-type receptor 3 OS=Rattus norvegicus GN=Celsr3 PE=2 SV=1 Back     alignment and function description
>sp|Q91ZI0|CELR3_MOUSE Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus GN=Celsr3 PE=2 SV=2 Back     alignment and function description
>sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2 Back     alignment and function description
>sp|Q9NYQ7|CELR3_HUMAN Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapiens GN=CELSR3 PE=1 SV=2 Back     alignment and function description
>sp|Q9HCU4|CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens GN=CELSR2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query817
158298604 1325 AGAP009725-PA [Anopheles gambiae str. PE 0.787 0.485 0.734 0.0
170065060 1033 conserved hypothetical protein [Culex qu 0.755 0.597 0.762 0.0
303228011 1271 LD09349p [Drosophila melanogaster] 0.793 0.509 0.721 0.0
270008135 1148 DN cadherin-like protein [Tribolium cast 0.755 0.537 0.760 0.0
194880377 1514 GG21728 [Drosophila erecta] gi|190657610 0.783 0.422 0.728 0.0
189237687 3035 PREDICTED: similar to Neural-cadherin pr 0.793 0.213 0.727 0.0
194758880 3097 GF15089 [Drosophila ananassae] gi|190615 0.793 0.209 0.724 0.0
195065835 1243 GH25256 [Drosophila grimshawi] gi|193891 0.783 0.514 0.729 0.0
195159812 3110 GL15835 [Drosophila persimilis] gi|19411 0.783 0.205 0.729 0.0
78706950 3100 Cadherin-N, isoform I [Drosophila melano 0.787 0.207 0.726 0.0
>gi|158298604|ref|XP_001238041.2| AGAP009725-PA [Anopheles gambiae str. PEST] gi|157013964|gb|EAU76025.2| AGAP009725-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
 Score = 1032 bits (2669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/728 (73%), Positives = 580/728 (79%), Gaps = 85/728 (11%)

Query: 51   PWIQI-TDDAFIIVVNWVIEQLLDRDVINHEVV-----------HTDNQRVIIHVKDVND 98
            PW+ + T+ A  +   W  E+L     I+  V+           +TDNQRVIIHVKDVND
Sbjct: 404  PWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNQGHNAGLKYTDNQRVIIHVKDVND 463

Query: 99   ESPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSDHNIHYFIVRDRTGGRFEVDERSG 158
            E PYFINRPLPMQAVVQLNAPPNTPVFTLQARDPD+DHNIHYFIVRDRTGGRFEVDERSG
Sbjct: 464  EPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHNIHYFIVRDRTGGRFEVDERSG 523

Query: 159  VVRTRGTDPFQLDQEYVLYVKAEDQNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEA 218
            VVRTRGTD FQLD EYVLYVKAEDQNG+ D+R+FQSTPEERLSIVGGKRAPQFYMPS   
Sbjct: 524  VVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVGGKRAPQFYMPS--- 580

Query: 219  EIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVAS 278
                                                   Y   + EN             
Sbjct: 581  ---------------------------------------YEAEIPEN------------Q 589

Query: 279  DKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPH 338
             KD D   IISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPH
Sbjct: 590  KKDSD---IISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPH 646

Query: 339  VYSLIVTATEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTSILKVKA 398
            VYSL+VTATEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHN+DEDI  GTSILKVKA
Sbjct: 647  VYSLVVTATEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILKVKA 706

Query: 399  TDADSGTNAEIEYHVSDDNFAVDSNGVINNHKTLDADNNNAYYEFVITAKDKD------- 451
             D+DSG NAEIEY VSDD+FAVDSNG+I N+K LDADNNNAYYEFV+TAKDK        
Sbjct: 707  MDSDSGANAEIEYLVSDDHFAVDSNGIIVNNKQLDADNNNAYYEFVVTAKDKGEPAKTGT 766

Query: 452  VDVELDVVDRNNKPPLWDNAIYGPIHIRENVTVSTVVTSVKA--------RFGFVGGSTS 503
              V +   ++N++ P +   +Y P ++ EN   +T+VT+V A        RFGFVGG TS
Sbjct: 767  ATVRVYTKNKNDEEPKFSQQVYTP-NVDENAGPNTLVTTVVASDKDGDNVRFGFVGGGTS 825

Query: 504  SGQFVIEDITGVIRLNSKSISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITD 563
            SGQFVIE+ITGVIRL+SK+ISLDRDKYELNVTA+DDG+CC NGD ++HT+TAVVVVFITD
Sbjct: 826  SGQFVIEEITGVIRLHSKAISLDRDKYELNVTAMDDGSCCVNGDATIHTSTAVVVVFITD 885

Query: 564  VNDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFT 623
            VNDNKPVF++C TYYPKVEEGAPNGSPVIKV ATDEDKGVNGQVKYSIVQQPNQKG KFT
Sbjct: 886  VNDNKPVFKDCGTYYPKVEEGAPNGSPVIKVQATDEDKGVNGQVKYSIVQQPNQKGTKFT 945

Query: 624  VDEETGEVVTNKVFDREGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITDVNDNPPLFDR 683
            VDEETGEV TNKVFDREGDDGKFVSVT+KATDQGEPSLEGVCSFTVEITDVNDNPPLFDR
Sbjct: 946  VDEETGEVSTNKVFDREGDDGKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDR 1005

Query: 684  QKYVENVKQDASIGTNILRVSASDEDADNNGAIVYTLSAPYNQMDLEYFEIQPESGWIVL 743
            QKYVENVKQDASIGTNILRVSASDEDADNNGAIVYTLSAP++  DLEYFEIQPESGWIVL
Sbjct: 1006 QKYVENVKQDASIGTNILRVSASDEDADNNGAIVYTLSAPHSPNDLEYFEIQPESGWIVL 1065

Query: 744  KKPLDVYY 751
            KKPLD  Y
Sbjct: 1066 KKPLDGCY 1073

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|170065060|ref|XP_001867785.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167882207|gb|EDS45590.1| conserved hypothetical protein [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|303228011|gb|ADM07129.1| LD09349p [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|270008135|gb|EFA04583.1| DN cadherin-like protein [Tribolium castaneum] Back     alignment and taxonomy information
>gi|194880377|ref|XP_001974423.1| GG21728 [Drosophila erecta] gi|190657610|gb|EDV54823.1| GG21728 [Drosophila erecta] Back     alignment and taxonomy information
>gi|189237687|ref|XP_969192.2| PREDICTED: similar to Neural-cadherin precursor (Cadherin-N protein) (DN-cadherin) [Tribolium castaneum] Back     alignment and taxonomy information
>gi|194758880|ref|XP_001961686.1| GF15089 [Drosophila ananassae] gi|190615383|gb|EDV30907.1| GF15089 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|195065835|ref|XP_001996748.1| GH25256 [Drosophila grimshawi] gi|193891968|gb|EDV90834.1| GH25256 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|195159812|ref|XP_002020772.1| GL15835 [Drosophila persimilis] gi|194117722|gb|EDW39765.1| GL15835 [Drosophila persimilis] Back     alignment and taxonomy information
>gi|78706950|ref|NP_001027280.1| Cadherin-N, isoform I [Drosophila melanogaster] gi|72151392|gb|AAZ66474.1| Cadherin-N, isoform I [Drosophila melanogaster] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query817
FB|FBgn0015609 3097 CadN "Cadherin-N" [Drosophila 0.578 0.152 0.784 6.7e-303
UNIPROTKB|F1NHQ5 2500 LOC427547 "Uncharacterized pro 0.560 0.183 0.347 1.4e-93
UNIPROTKB|F1NHQ1 2501 LOC427547 "Uncharacterized pro 0.560 0.183 0.347 1.4e-93
UNIPROTKB|F1NJK1 2537 LOC427547 "Uncharacterized pro 0.560 0.180 0.347 1.5e-93
UNIPROTKB|F1P3P7 2530 LOC414835 "Uncharacterized pro 0.556 0.179 0.337 4.8e-87
UNIPROTKB|F1NBM7 2449 LOC414835 "Uncharacterized pro 0.556 0.185 0.337 1.7e-84
ZFIN|ZDB-GENE-100922-84 2780 si:dkey-22o22.2 "si:dkey-22o22 0.564 0.165 0.343 4.3e-84
WB|WBGene00001980 2920 hmr-1 [Caenorhabditis elegans 0.301 0.084 0.364 1.2e-81
UNIPROTKB|Q967F4 2920 hmr-1 "Cadherin-related hmr-1" 0.301 0.084 0.364 1.2e-81
UNIPROTKB|F1NXZ5 4557 FAT3 "Uncharacterized protein" 0.589 0.105 0.289 4.7e-55
FB|FBgn0015609 CadN "Cadherin-N" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1954 (692.9 bits), Expect = 6.7e-303, Sum P(3) = 6.7e-303
 Identities = 386/492 (78%), Positives = 423/492 (85%)

Query:   280 KDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHV 339
             KD D   IIS+KAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHV
Sbjct:   666 KDSD---IISIKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHV 722

Query:   340 YSLIVTATEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTSILKVKAT 399
             YSLIVTATEDSGGFSTSV+LTIRVTDVNDNAPKFELPDYQAHN+DEDI  GTSIL+VKA 
Sbjct:   723 YSLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAM 782

Query:   400 DADSGTNAEIEYHVSDDNFAVDSNGVINNHKTLDADNNNAYYEFVITAX-------XXXX 452
             D+DSG+NAEIEY VSDD+FAVDSNG+I N+K LDADNNNAYYEF++TA            
Sbjct:   783 DSDSGSNAEIEYLVSDDHFAVDSNGIIVNNKQLDADNNNAYYEFIVTAKDKGEPPKSGVA 842

Query:   453 XXXXXXXXRNNKPPLWDNAIYGPIHIRENXXXXXXXXXXKA--------RFGFVGGSTSS 504
                     +N++ P +   +Y P ++ EN           A        RFGFVGG TSS
Sbjct:   843 TVRVYTKNKNDEEPKFSQQVYTP-NVDENAGPNTLVTTVVASDKDGDNVRFGFVGGGTSS 901

Query:   505 GQFVIEDITGVIRLNSKSISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITDV 564
             GQFVIEDITGVIRL++K+ISLD+DKYELNVTA+DDG+CC NGDQ++HT+TAVVVVFITDV
Sbjct:   902 GQFVIEDITGVIRLHNKAISLDKDKYELNVTAMDDGSCCVNGDQTIHTSTAVVVVFITDV 961

Query:   565 NDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTV 624
             NDNKPVF++CSTYYPKVEEGAPNGSPVIKV ATDEDKGVNGQVKYSIVQQPNQKG KFTV
Sbjct:   962 NDNKPVFKDCSTYYPKVEEGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQPNQKGTKFTV 1021

Query:   625 DEETGEVVTNKVFDREGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQ 684
             DEETGEV TNKVFDREGDDGKFVSVT+KATDQG+PSLEGVCSFTVEITDVNDNPPLFDRQ
Sbjct:  1022 DEETGEVSTNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQ 1081

Query:   685 KYVENVKQDASIGTNILRVSASDEDADNNGAIVYTLSAPYNQMDLEYFEIQPESGWIVLK 744
             KYVENVKQDASIGTNILRVSASDEDADNNGAIVY+L+AP+N  DLEYFEIQ ESGWIVLK
Sbjct:  1082 KYVENVKQDASIGTNILRVSASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWIVLK 1141

Query:   745 KPLDVYYYIVDS 756
             KPLD   Y +++
Sbjct:  1142 KPLDRETYKLEA 1153
GO:0005911 "cell-cell junction" evidence=IDA
GO:0016021 "integral to membrane" evidence=ISS
GO:0007156 "homophilic cell adhesion" evidence=ISS;IDA
GO:0005886 "plasma membrane" evidence=ISS;IDA;TAS
GO:0016339 "calcium-dependent cell-cell adhesion" evidence=ISS;IPI
GO:0005515 "protein binding" evidence=IPI
GO:0007413 "axonal fasciculation" evidence=TAS
GO:0050839 "cell adhesion molecule binding" evidence=ISS
GO:0005887 "integral to plasma membrane" evidence=ISS
GO:0004872 "receptor activity" evidence=ISS
GO:0007155 "cell adhesion" evidence=NAS
GO:0007412 "axon target recognition" evidence=IMP
GO:0008013 "beta-catenin binding" evidence=NAS
GO:0007411 "axon guidance" evidence=IGI;IMP;NAS
GO:0050774 "negative regulation of dendrite morphogenesis" evidence=IMP
GO:0048846 "axon extension involved in axon guidance" evidence=IMP
GO:0016318 "ommatidial rotation" evidence=IMP
GO:0045463 "R8 cell development" evidence=IMP
GO:0044331 "cell-cell adhesion mediated by cadherin" evidence=IDA
GO:0045467 "R7 cell development" evidence=IMP
GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP
GO:0048841 "regulation of axon extension involved in axon guidance" evidence=IMP
GO:0048675 "axon extension" evidence=IMP
GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP
GO:0045296 "cadherin binding" evidence=IPI
GO:0005509 "calcium ion binding" evidence=IDA
GO:0042803 "protein homodimerization activity" evidence=IPI
UNIPROTKB|F1NHQ5 LOC427547 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NHQ1 LOC427547 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NJK1 LOC427547 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1P3P7 LOC414835 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NBM7 LOC414835 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-100922-84 si:dkey-22o22.2 "si:dkey-22o22.2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
WB|WBGene00001980 hmr-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q967F4 hmr-1 "Cadherin-related hmr-1" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|F1NXZ5 FAT3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O15943CADN_DROMENo assigned EC number0.72160.79310.2092yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query817
cd1130498 cd11304, Cadherin_repeat, Cadherin tandem repeat d 6e-27
smart0011281 smart00112, CA, Cadherin repeats 1e-21
cd1130498 cd11304, Cadherin_repeat, Cadherin tandem repeat d 9e-20
pfam0002892 pfam00028, Cadherin, Cadherin domain 2e-18
cd1130498 cd11304, Cadherin_repeat, Cadherin tandem repeat d 4e-13
smart0011281 smart00112, CA, Cadherin repeats 5e-13
cd1130498 cd11304, Cadherin_repeat, Cadherin tandem repeat d 8e-13
cd1130498 cd11304, Cadherin_repeat, Cadherin tandem repeat d 2e-12
cd1130498 cd11304, Cadherin_repeat, Cadherin tandem repeat d 2e-11
pfam0002892 pfam00028, Cadherin, Cadherin domain 9e-11
pfam0002892 pfam00028, Cadherin, Cadherin domain 2e-09
pfam0002892 pfam00028, Cadherin, Cadherin domain 3e-09
pfam0002892 pfam00028, Cadherin, Cadherin domain 8e-09
smart0011281 smart00112, CA, Cadherin repeats 2e-08
smart0011281 smart00112, CA, Cadherin repeats 4e-08
smart0011281 smart00112, CA, Cadherin repeats 3e-06
smart0011281 smart00112, CA, Cadherin repeats 6e-06
pfam0002892 pfam00028, Cadherin, Cadherin domain 6e-04
cd0003198 cd00031, CA_like, Cadherin repeat-like domain 0.003
>gnl|CDD|206637 cd11304, Cadherin_repeat, Cadherin tandem repeat domain Back     alignment and domain information 
 Score =  105 bits (263), Expect = 6e-27
 Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 4/102 (3%)

Query: 576 TYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNK 635
           +Y   V E AP G+ V+ V ATD D G NG+V YSIV         F++D  TGE+ T K
Sbjct: 1   SYEVSVPENAPPGTVVLTVSATDPDSGENGEVTYSIVSGNEDG--LFSIDPSTGEITTAK 58

Query: 636 VFDREGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITDVNDN 677
             DRE  +    ++T+ ATD G P L    + T+ + DVNDN
Sbjct: 59  PLDRE--EQSSYTLTVTATDGGGPPLSSTATVTITVLDVNDN 98

Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Length = 98
>gnl|CDD|214520 smart00112, CA, Cadherin repeats Back     alignment and domain information
>gnl|CDD|206637 cd11304, Cadherin_repeat, Cadherin tandem repeat domain Back     alignment and domain information
>gnl|CDD|215665 pfam00028, Cadherin, Cadherin domain Back     alignment and domain information
>gnl|CDD|206637 cd11304, Cadherin_repeat, Cadherin tandem repeat domain Back     alignment and domain information
>gnl|CDD|214520 smart00112, CA, Cadherin repeats Back     alignment and domain information
>gnl|CDD|206637 cd11304, Cadherin_repeat, Cadherin tandem repeat domain Back     alignment and domain information
>gnl|CDD|206637 cd11304, Cadherin_repeat, Cadherin tandem repeat domain Back     alignment and domain information
>gnl|CDD|206637 cd11304, Cadherin_repeat, Cadherin tandem repeat domain Back     alignment and domain information
>gnl|CDD|215665 pfam00028, Cadherin, Cadherin domain Back     alignment and domain information
>gnl|CDD|215665 pfam00028, Cadherin, Cadherin domain Back     alignment and domain information
>gnl|CDD|215665 pfam00028, Cadherin, Cadherin domain Back     alignment and domain information
>gnl|CDD|215665 pfam00028, Cadherin, Cadherin domain Back     alignment and domain information
>gnl|CDD|214520 smart00112, CA, Cadherin repeats Back     alignment and domain information
>gnl|CDD|214520 smart00112, CA, Cadherin repeats Back     alignment and domain information
>gnl|CDD|214520 smart00112, CA, Cadherin repeats Back     alignment and domain information
>gnl|CDD|214520 smart00112, CA, Cadherin repeats Back     alignment and domain information
>gnl|CDD|215665 pfam00028, Cadherin, Cadherin domain Back     alignment and domain information
>gnl|CDD|206635 cd00031, CA_like, Cadherin repeat-like domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 817
KOG4289|consensus 2531 100.0
KOG4289|consensus 2531 100.0
KOG1219|consensus 4289 100.0
KOG1219|consensus 4289 100.0
cd00031199 CA Cadherin repeat domain; Cadherins are glycoprot 99.97
cd00031199 CA Cadherin repeat domain; Cadherins are glycoprot 99.95
PF0002893 Cadherin: Cadherin domain; InterPro: IPR002126 Cad 99.65
PF0002893 Cadherin: Cadherin domain; InterPro: IPR002126 Cad 99.64
KOG1834|consensus 952 99.58
smart0011279 CA Cadherin repeats. Cadherins are glycoproteins i 99.55
KOG1834|consensus 952 99.46
smart0011279 CA Cadherin repeats. Cadherins are glycoproteins i 99.39
PF0875890 Cadherin_pro: Cadherin prodomain like; InterPro: I 97.06
PF0826684 Cadherin_2: Cadherin-like; InterPro: IPR013164 Cad 96.96
PF0875890 Cadherin_pro: Cadherin prodomain like; InterPro: I 96.77
PF0826684 Cadherin_2: Cadherin-like; InterPro: IPR013164 Cad 96.16
TIGR0196599 VCBS_repeat VCBS repeat. This domain of about 100 95.3
smart0073697 CADG Dystroglycan-type cadherin-like domains. Cadh 95.08
smart0073697 CADG Dystroglycan-type cadherin-like domains. Cadh 94.82
TIGR0196599 VCBS_repeat VCBS repeat. This domain of about 100 94.4
PF13750158 Big_3_3: Bacterial Ig-like domain (group 3) 91.43
TIGR00845 928 caca sodium/calcium exchanger 1. This model is spe 90.1
TIGR00845928 caca sodium/calcium exchanger 1. This model is spe 87.56
PF13750158 Big_3_3: Bacterial Ig-like domain (group 3) 87.42
PF0534549 He_PIG: Putative Ig domain; InterPro: IPR008009 Th 82.92
PF0534549 He_PIG: Putative Ig domain; InterPro: IPR008009 Th 80.91
>KOG4289|consensus Back     alignment and domain information 
Probab=100.00  E-value=1e-100  Score=859.84  Aligned_cols=660  Identities=30%  Similarity=0.458  Sum_probs=595.6

Q ss_pred             eeeeecccccceeeEeeeeccCCC--CcCcEEecCC--eEEEeeeccccccceeeee--e---cCCCCCceEEEEEEEEe
Q psy11097         25 RYKIMNSKYLMNCIVNESLKQNMT--SIPWIQITDD--AFIIVVNWVIEQLLDRDVI--N---HEVVHTDNQRVIIHVKD   95 (817)
Q Consensus        25 ~~~~~~~~~~~~~~v~~~~~~~~~--~~~~f~i~~~--~l~~~~~lD~E~~~~~~~~--~---~~~~~~~~~~v~I~V~D   95 (817)
                      ....+++|   ...+.|++.+-++  +..+|.||+-  .|++++.||||.+..|.+.  +   .++..+++++|+|.|.|
T Consensus       185 sv~A~~~~---a~rl~Ysm~al~dsRS~~lFslD~~sG~irta~~lDREt~e~HvlrVtA~d~~~P~~SAtttv~V~V~D  261 (2531)
T KOG4289|consen  185 SVKASDPD---AGRLYYSMVALFDSRSQNLFSLDPMSGAIRTAKSLDRETKETHVLRVTAQDHGDPRRSATTTVTVLVLD  261 (2531)
T ss_pred             EEEecCCC---cCceEEEeeeccchhccccEeeccccccchhhhhhhhhhhheeEEEEEeeecCCCcccceeEEEEEEee
Confidence            34455555   4577888765443  5669999985  9999999999999998665  3   34668899999999999


Q ss_pred             cCCCCCeeecCCCCeEEEEeccCCCCceEEEEEeecCCCCcc--EEEEEEecCCCCceEEEcceeEEEeccCCCcccccE
Q psy11097         96 VNDESPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSDHN--IHYFIVRDRTGGRFEVDERSGVVRTRGTDPFQLDQE  173 (817)
Q Consensus        96 vNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~~--~~y~l~~~~~~~~F~Id~~tG~i~~~~~ld~e~~~~  173 (817)
                      +|||.|+|++..  |..++.||.+.|+.|++|+|+|.|++.|  +.|++..+++...|+||+.+|.|++.+++|+|....
T Consensus       262 ~nDhsPvFEq~~--Y~e~lREn~evGy~vLtvrAtD~Dsp~Nani~Yrl~eg~~~~~f~in~rSGvI~T~a~lDRE~~~~  339 (2531)
T KOG4289|consen  262 TNDHSPVFEQDE--YREELRENLEVGYEVLTVRATDGDSPPNANIRYRLLEGNAKNVFEINPRSGVISTRAPLDREELES  339 (2531)
T ss_pred             cCCCCcccchhH--HHHHHhhccccCceEEEEEeccCCCCCCCceEEEecCCCccceeEEcCccceeeccCccCHHhhhh
Confidence            999999999876  5677999999999999999999999876  999999988889999999999999999999999999


Q ss_pred             EEEEEEEEecCCcccccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEEEEEEeeCCCCCCcC
Q psy11097        174 YVLYVKAEDQNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKF  253 (817)
Q Consensus       174 y~l~v~a~D~~g~~~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v~I~V~DvNDn~P~f  253 (817)
                      |.|.|.|+|+|-.                                             +--.++.|.|+|.|+|||+|+|
T Consensus       340 y~L~VeAsDqG~~---------------------------------------------pgp~Ta~V~itV~D~NDNaPqF  374 (2531)
T KOG4289|consen  340 YQLDVEASDQGRP---------------------------------------------PGPRTAMVEITVEDENDNAPQF  374 (2531)
T ss_pred             eEEEEEeccCCCC---------------------------------------------CCCceEEEEEEEEecCCCCccc
Confidence            9999999997632                                             1123899999999999999999


Q ss_pred             cCceeeEEEeCCCCCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCCCCCCeEEeCceeEEEeCccCCccc
Q psy11097        254 SQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFED  333 (817)
Q Consensus       254 ~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~~~~~F~Id~~tG~i~~~~~LD~E~  333 (817)
                      ....|.+.|.|+..++++|++|+|+|.|.+            .|+.++|+|. +|++.+.|.||..||+|.+..+||+|.
T Consensus       375 se~~Yvvqv~Edvt~~avvlrV~AtDrD~g------------~Ng~VHYsi~-Sgn~~G~f~id~~tGel~vv~plD~e~  441 (2531)
T KOG4289|consen  375 SEKRYVVQVREDVTPPAVVLRVTATDRDKG------------TNGKVHYSIA-SGNGRGQFYIDSLTGELDVVEPLDFEN  441 (2531)
T ss_pred             cccceEEEecccCCCCceEEEEEecccCCC------------cCceEEEEee-ccCccccEEEecccceEEEeccccccC
Confidence            999999999999999999999999999988            4788999997 689999999999999999999999997


Q ss_pred             cCCCeEEEEEEEEEeCCC--CceEEEEEEEEEEeeCCCCCcccCCCcceEEeeCCCCCCcEEEEEEEEeCCCCCCceEEE
Q psy11097        334 LRQPHVYSLIVTATEDSG--GFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTSILKVKATDADSGTNAEIEY  411 (817)
Q Consensus       334 ~~~~~~y~l~V~a~d~~g--~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~~V~E~~~~Gt~v~~v~A~D~D~g~n~~i~y  411 (817)
                          ..|++.|+|.| +|  .++.+.-+.|+|+|+|||+|.|...+++. +|.|+.+.|..+.++.|.|+|+|.|+.+.|
T Consensus       442 ----~~ytl~IrAqD-ggrPpLsn~sgl~iqVlDINDhaPifvstpfq~-tvlEnv~lg~~v~~vqaidadsg~na~l~y  515 (2531)
T KOG4289|consen  442 ----SEYTLRIRAQD-GGRPPLSNTSGLVIQVLDINDHAPIFVSTPFQA-TVLENVPLGYLVCHVQAIDADSGENARLHY  515 (2531)
T ss_pred             ----CeeEEEEEccc-CCCCCccCCCceEEEEEecCCCCceeEechhhh-hhhhcccccceEEEEecccCCCCcccceee
Confidence                47999999995 44  47877778899999999999999999987 899999999999999999999999999999


Q ss_pred             EEec-CceEEcc-ceeEEEeeecccCCCCcEEEEEEEEecCCc-------eEEEEEEeCCCCCCccCCCccceeEeeccC
Q psy11097        412 HVSD-DNFAVDS-NGVINNHKTLDADNNNAYYEFVITAKDKDV-------DVELDVVDRNNKPPLWDNAIYGPIHIRENV  482 (817)
Q Consensus       412 ~i~~-~~F~I~~-~G~i~~~~~ld~e~~~~~~~l~V~a~D~g~-------~v~I~V~d~Nd~~P~f~~~~y~~i~v~E~~  482 (817)
                      ++.+ ++|.|+. +|+|++.+.||||+. ..|.|.|.|+|.|.       .|.|++.|+|||.|.|+++.|.. .+.|+.
T Consensus       516 ~laG~~pf~I~~~SG~Itvtk~ldrEt~-~~ysl~V~ard~gtp~l~tstsI~Vtv~dvndndP~Ft~~eytl-~inED~  593 (2531)
T KOG4289|consen  516 SLAGVGPFQINNGSGWITVTKELDRETV-EHYSLGVEARDHGTPPLSTSTSISVTVLDVNDNDPTFTQKEYTL-RINEDA  593 (2531)
T ss_pred             eeccCCCeeEecCCceEEEeeccccccc-ceEEEEEEEcCCCCCcccccceEEEEecccCCCCCccccCceEE-EecCCc
Confidence            9987 7999998 899999999999998 58999999999997       79999999999999999999998 999999


Q ss_pred             CcCeEEEEEEE---------EEEeecCCcccccEEEEccc--cEEEEcccccccccc---cEEEEEEEEeCCccccCCCC
Q psy11097        483 TVSTVVTSVKA---------RFGFVGGSTSSGQFVIEDIT--GVIRLNSKSISLDRD---KYELNVTAVDDGACCANGDQ  548 (817)
Q Consensus       483 ~~g~~v~~v~a---------~~~~~~~~~~~~~F~Id~~t--G~i~~~~~~~~ld~e---~y~l~V~a~D~~~~~~~~~~  548 (817)
                      +.|+.|.+++|         +|.+.++ +....|.|+...  |.|.+..   ++|+.   +|.+.|+|+|++        
T Consensus       594 pvgsSI~tvtAvD~d~~s~ityqi~g~-ntrn~Fsi~si~g~Glitlal---p~dkKqe~~~vl~vtAtDg~--------  661 (2531)
T KOG4289|consen  594 PVGSSIVTVTAVDRDANSVITYQITGG-NTRNRFSISSIGGGGLITLAL---PLDKKQERQYVLAVTATDGT--------  661 (2531)
T ss_pred             cccceEEEEEEeccccccceEEEecCC-cccccceeeccCCcceEEeec---chhhcccceEEEEEEecCCc--------
Confidence            99999999999         5666544 667899999876  5677765   45653   799999999954        


Q ss_pred             CcceeeEEEEEEEeecCCCCCccccCCCceeEEecCCCCCceEEEEEEecCCCCCCceEEEEEEecCCCCCccEEEeccc
Q psy11097        549 SVHTATAVVVVFITDVNDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEET  628 (817)
Q Consensus       549 ~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~En~~~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~~~~~~F~Id~~t  628 (817)
                        +..++.|.|.|.|.|-+.|.|.. ..|.++|.|..|.|+.|.+++|+|.|.|+|++|+| |...     ..|+||+.+
T Consensus       662 --l~d~~~V~v~I~danThrpvFqs-~pfTvsI~e~rP~G~tvvtlsasd~D~geNARI~y-~led-----~~Frid~ds  732 (2531)
T KOG4289|consen  662 --LQDTCSVNVNITDANTHRPVFQS-SPFTVSINEDRPLGTTVVTLSASDEDTGENARITY-ILED-----EAFRIDPDS  732 (2531)
T ss_pred             --cccceEEEEEeeecccCCccccc-CCeeEeeccCCcCCceeEEEecccCCCCccceEEE-Eecc-----cceeecCCC
Confidence              46788999999999999999997 89999999999999999999999999999999999 4432     269999999


Q ss_pred             ceEEecccccccCCCCcEEEEEEEEEeCCCCCceeEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeC
Q psy11097        629 GEVVTNKVFDREGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDE  708 (817)
Q Consensus       629 G~i~~~~~lD~E~~~~~~~~l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~  708 (817)
                      |.+++...||||.+  ..|.+.++|.|.|.|++..+.+|.|.|.|+|||+|+|..+.|.++|.|++|+++.|++|+|+|+
T Consensus       733 g~i~t~~~ld~edq--vtytl~itA~D~~~pq~adtttveV~v~diNDnaPqf~assyt~sV~Ed~Pv~TsvlQVSatDa  810 (2531)
T KOG4289|consen  733 GAIYTQAELDYEDQ--VTYTLAITARDNGIPQKADTTTVEVLVNDINDNAPQFLASSYTGSVFEDAPVFTSVLQVSATDA  810 (2531)
T ss_pred             CceEEeeeeecccc--eeeEeeeeecCCCCCCcCccEEEEEEeecccccCcccchhhceeEeecCCCCcceEEEEEEecc
Confidence            99999999999987  5699999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCceEEEEEecCcCCCCCcceEEeCCeeEEEEeeeceEEEEEeeCCCCCCcccEEEeCceeEEEEcccCCcccccEE
Q psy11097        709 DADNNGAIVYTLSAPYNQMDLEYFEIQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTKVVFDREKQGAY  788 (817)
Q Consensus       709 D~g~n~~i~Y~l~~~~~~~~~~~F~Id~~tG~i~~~~~ld~~y~~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y  788 (817)
                      |.|.||.+.|.+.++.                                   .+.+.|.|++++|.|++.+.||||..+.|
T Consensus       811 D~g~Ng~v~y~~qg~~-----------------------------------d~p~~F~IEptSGviRtl~rLdRE~~avy  855 (2531)
T KOG4289|consen  811 DSGPNGRVYYTFQGGD-----------------------------------DGPGDFYIEPTSGVIRTLRRLDRENVAVY  855 (2531)
T ss_pred             CCCCCceEEEEecCCC-----------------------------------CCCCceEEccCcceeehhhhhcchheeEE
Confidence            9999999999887642                                   23467999999999999999999999999


Q ss_pred             EEEEEEEeCCCCCCCCCCCCCCccc
Q psy11097        789 ALEVEARDGAPSARPNSDGEPNSAC  813 (817)
Q Consensus       789 ~l~V~a~D~g~p~~~~~~~~~v~v~  813 (817)
                      .|.+.|+|.|.|+++.+..+||.|.
T Consensus       856 ~L~a~avDrg~p~ls~~~eItvtvl  880 (2531)
T KOG4289|consen  856 VLAAYAVDRGNPPLSAPVEITVTVL  880 (2531)
T ss_pred             EEEEEEeeCCCCCcCCceEEEEEEE
Confidence            9999999999999999998888763

>KOG4289|consensus Back     alignment and domain information
>KOG1219|consensus Back     alignment and domain information
>KOG1219|consensus Back     alignment and domain information
>cd00031 CA Cadherin repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion; these domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium; plays a role in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-,CNR-,proto-,and FAT-family cadherin, desmocollin, and desmoglein, exists as monomers or dimers (hetero- and homo-); two copies of the repeat are present here Back     alignment and domain information
>cd00031 CA Cadherin repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion; these domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium; plays a role in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-,CNR-,proto-,and FAT-family cadherin, desmocollin, and desmoglein, exists as monomers or dimers (hetero- and homo-); two copies of the repeat are present here Back     alignment and domain information
>PF00028 Cadherin: Cadherin domain; InterPro: IPR002126 Cadherins are a family of adhesion molecules that mediate Ca2+-dependent cell-cell adhesion in all solid tissues of the organism which modulate a wide variety of processes including cell polarisation and migration [, ,] Back     alignment and domain information
>PF00028 Cadherin: Cadherin domain; InterPro: IPR002126 Cadherins are a family of adhesion molecules that mediate Ca2+-dependent cell-cell adhesion in all solid tissues of the organism which modulate a wide variety of processes including cell polarisation and migration [, ,] Back     alignment and domain information
>KOG1834|consensus Back     alignment and domain information
>smart00112 CA Cadherin repeats Back     alignment and domain information
>KOG1834|consensus Back     alignment and domain information
>smart00112 CA Cadherin repeats Back     alignment and domain information
>PF08758 Cadherin_pro: Cadherin prodomain like; InterPro: IPR014868 Cadherins are a group of proteins that mediate calcium dependent cell-cell adhesion Back     alignment and domain information
>PF08266 Cadherin_2: Cadherin-like; InterPro: IPR013164 Cadherins are a family of adhesion molecules that mediate Ca2+-dependent cell-cell adhesion in all solid tissues of the organism which modulate a wide variety of processes including cell polarisation and migration [, ,] Back     alignment and domain information
>PF08758 Cadherin_pro: Cadherin prodomain like; InterPro: IPR014868 Cadherins are a group of proteins that mediate calcium dependent cell-cell adhesion Back     alignment and domain information
>PF08266 Cadherin_2: Cadherin-like; InterPro: IPR013164 Cadherins are a family of adhesion molecules that mediate Ca2+-dependent cell-cell adhesion in all solid tissues of the organism which modulate a wide variety of processes including cell polarisation and migration [, ,] Back     alignment and domain information
>TIGR01965 VCBS_repeat VCBS repeat Back     alignment and domain information
>smart00736 CADG Dystroglycan-type cadherin-like domains Back     alignment and domain information
>smart00736 CADG Dystroglycan-type cadherin-like domains Back     alignment and domain information
>TIGR01965 VCBS_repeat VCBS repeat Back     alignment and domain information
>PF13750 Big_3_3: Bacterial Ig-like domain (group 3) Back     alignment and domain information
>TIGR00845 caca sodium/calcium exchanger 1 Back     alignment and domain information
>TIGR00845 caca sodium/calcium exchanger 1 Back     alignment and domain information
>PF13750 Big_3_3: Bacterial Ig-like domain (group 3) Back     alignment and domain information
>PF05345 He_PIG: Putative Ig domain; InterPro: IPR008009 This alignment represents the conserved core region of a ~90 residue repeat found in several haemagglutinins and other cell surface proteins Back     alignment and domain information
>PF05345 He_PIG: Putative Ig domain; InterPro: IPR008009 This alignment represents the conserved core region of a ~90 residue repeat found in several haemagglutinins and other cell surface proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query817
3ubh_A419 Crystal Structure Of Drosophila N-Cadherin Ec1-4 Le 1e-152
3ubh_A419 Crystal Structure Of Drosophila N-Cadherin Ec1-4 Le 1e-10
3ubh_A419 Crystal Structure Of Drosophila N-Cadherin Ec1-4 Le 3e-09
3ubf_A316 Crystal Structure Of Drosophila N-Cadherin Ec1-3, I 1e-112
2a62_A322 Crystal Structure Of Mouse Cadherin-8 Ec1-3 Length 4e-14
2a62_A322 Crystal Structure Of Mouse Cadherin-8 Ec1-3 Length 2e-06
1q55_A 880 W-Shaped Trans Interactions Of Cadherins Model Base 9e-14
1q55_A 880 W-Shaped Trans Interactions Of Cadherins Model Base 9e-08
1l3w_A 546 C-Cadherin Ectodomain Length = 546 2e-13
1l3w_A 546 C-Cadherin Ectodomain Length = 546 1e-07
3q2v_A 550 Crystal Structure Of Mouse E-Cadherin Ectodomain Le 3e-13
3q2v_A 550 Crystal Structure Of Mouse E-Cadherin Ectodomain Le 4e-07
3q2w_A559 Crystal Structure Of Mouse N-Cadherin Ectodomain Le 9e-13
3q2w_A 559 Crystal Structure Of Mouse N-Cadherin Ectodomain Le 1e-04
1edh_A226 E-Cadherin Domains 1 And 2 In Complex With Calcium 2e-10
1edh_A226 E-Cadherin Domains 1 And 2 In Complex With Calcium 3e-07
2a4e_A215 Crystal Structure Of Mouse Cadherin-11 Ec1-2 Length 4e-10
3lnd_A207 Crystal Structure Of Cadherin-6 Ec12 W4a Length = 2 1e-09
3k5r_A218 Crystal Structure Of Mouse T-Cadherin Ec1 Ec2 Lengt 3e-09
3k5r_A218 Crystal Structure Of Mouse T-Cadherin Ec1 Ec2 Lengt 1e-07
3k5s_A217 Crystal Structure Of Chicken T-Cadherin Ec1 Ec2 Len 5e-09
3k5s_A217 Crystal Structure Of Chicken T-Cadherin Ec1 Ec2 Len 6e-06
1ff5_A219 Structure Of E-Cadherin Double Domain Length = 219 1e-08
1ff5_A219 Structure Of E-Cadherin Double Domain Length = 219 4e-07
1ncj_A215 N-Cadherin, Two-Domain Fragment Length = 215 1e-08
1ncj_A215 N-Cadherin, Two-Domain Fragment Length = 215 9e-05
2yst_A119 Solution Structure Of The Third Cadherin Domain Fro 1e-08
3lni_A213 Crystal Structure Of E-Cadherin Ec12 E89a Length = 1e-08
3lni_A213 Crystal Structure Of E-Cadherin Ec12 E89a Length = 3e-07
3lni_A213 Crystal Structure Of E-Cadherin Ec12 E89a Length = 2e-06
4aqe_A214 Crystal Structure Of Deafness Associated Mutant Mou 2e-08
3mvs_A210 Structure Of The N-Terminus Of Cadherin 23 Length = 2e-08
3mvs_A210 Structure Of The N-Terminus Of Cadherin 23 Length = 3e-08
2ee0_A114 Solution Structures Of The Ca Domain Of Human Proto 2e-08
2ee0_A114 Solution Structures Of The Ca Domain Of Human Proto 5e-04
1suh_A146 Amino-Terminal Domain Of Epithelial Cadherin In The 2e-08
1suh_A146 Amino-Terminal Domain Of Epithelial Cadherin In The 1e-05
2qvi_A215 Crystal Structure Of N-Cadherin Domains Ec12 Length 2e-08
2qvi_A215 Crystal Structure Of N-Cadherin Domains Ec12 Length 1e-04
3lne_A213 Crystal Structure Of E-Cadherin Ec12 K14e Length = 2e-08
3lne_A213 Crystal Structure Of E-Cadherin Ec12 K14e Length = 4e-07
1q1p_A212 E-Cadherin Activation Length = 212 2e-08
1q1p_A212 E-Cadherin Activation Length = 212 4e-07
3q2n_A213 Mouse E-Cadherin Ec1-2 L175d Mutant Length = 213 2e-08
3q2n_A213 Mouse E-Cadherin Ec1-2 L175d Mutant Length = 213 7e-07
3q2n_A213 Mouse E-Cadherin Ec1-2 L175d Mutant Length = 213 7e-07
2qvf_B213 Mouse E-cadherin Domains 1,2 Length = 213 2e-08
2qvf_B213 Mouse E-cadherin Domains 1,2 Length = 213 4e-07
3qrb_A213 Crystal Structure Of E-Cadherin Ec1-2 P5a P6a Lengt 3e-08
3qrb_A213 Crystal Structure Of E-Cadherin Ec1-2 P5a P6a Lengt 4e-07
3lng_A215 Crystal Structure Of E-Cadherin Ec12 Aa Extension L 3e-08
3lng_A215 Crystal Structure Of E-Cadherin Ec12 Aa Extension L 4e-07
3lnh_A213 Crystal Structure Of E-Cadherin Ec12 W2a Length = 2 3e-08
3lnh_A213 Crystal Structure Of E-Cadherin Ec12 W2a Length = 2 4e-07
2wcp_A214 Crystal Structure Of Mouse Cadherin-23 Ec1-2 Length 3e-08
3lnf_A213 Crystal Structure Of E-Cadherin Ec12 K14ew2a Length 3e-08
3lnf_A213 Crystal Structure Of E-Cadherin Ec12 K14ew2a Length 4e-07
3q2l_A213 Mouse E-Cadherin Ec1-2 V81d Mutant Length = 213 2e-07
3q2l_A213 Mouse E-Cadherin Ec1-2 V81d Mutant Length = 213 8e-07
2wd0_A214 Crystal Structure Of Nonsyndromic Deafness (Dfnb12) 2e-07
2o72_A213 Crystal Structure Analysis Of Human E-Cadherin (1-2 8e-07
2o72_A213 Crystal Structure Analysis Of Human E-Cadherin (1-2 7e-06
2o72_A213 Crystal Structure Analysis Of Human E-Cadherin (1-2 4e-05
4apx_B242 Crystal Structure Of Mouse Cadherin-23 Ec1-2 And Pr 2e-05
3ppe_A203 Crystal Structure Of Chicken Ve-Cadherin Ec1-2 Leng 1e-04
>pdb|3UBH|A Chain A, Crystal Structure Of Drosophila N-Cadherin Ec1-4 Length = 419 Back     alignment and structure 
Iteration: 1

 Score =  536 bits (1382), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 282/409 (68%), Positives = 306/409 (74%), Gaps = 69/409 (16%)
Query: 51  PWIQI-TDDAFIIVVNWVIEQLLDRDVINHEVV-----------HTDNQRVIIHVKDVND 98
           PW+ + T+ A  +   W  E+L     I+  V+           +TDNQRVII VKDVND
Sbjct: 47  PWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVND 106
Query: 99  ESPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSDHNIHYFIVRDRTGGRFEVDERSG 158
           E PYFINRPLPMQAVVQLNAPPNTPVFTLQARDPD+DHNIHYFIVRDRTGGRFEVDERSG
Sbjct: 107 EPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHNIHYFIVRDRTGGRFEVDERSG 166
Query: 159 VVRTRGTDPFQLDQEYVLYVKAEDQNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEA 218
           VVRTRGTD FQLD EYVLYVKAEDQNG+ D+R+FQSTPEERLSIVGGKRAPQFYMPS   
Sbjct: 167 VVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVGGKRAPQFYMPS--- 223
Query: 219 EIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVAS 278
                                                  Y   + EN             
Sbjct: 224 ---------------------------------------YEAEIPEN------------Q 232
Query: 279 DKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPH 338
            KD D   IIS+KAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPH
Sbjct: 233 KKDSD---IISIKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPH 289
Query: 339 VYSLIVTATEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTSILKVKA 398
           VYSLIVTATEDSGGFSTSV+LTIRVTDVNDNAPKFELPDYQAHN+DEDI  GTSIL+VKA
Sbjct: 290 VYSLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKA 349
Query: 399 TDADSGTNAEIEYHVSDDNFAVDSNGVINNHKTLDADNNNAYYEFVITA 447
            D+DSG+NAEIEY VSDD+FAVDSNG+I N+K LDADNNNAYYEF++TA
Sbjct: 350 MDSDSGSNAEIEYLVSDDHFAVDSNGIIVNNKQLDADNNNAYYEFIVTA 398
>pdb|3UBH|A Chain A, Crystal Structure Of Drosophila N-Cadherin Ec1-4 Length = 419 Back     alignment and structure
>pdb|3UBH|A Chain A, Crystal Structure Of Drosophila N-Cadherin Ec1-4 Length = 419 Back     alignment and structure
>pdb|3UBF|A Chain A, Crystal Structure Of Drosophila N-Cadherin Ec1-3, I Length = 316 Back     alignment and structure
>pdb|2A62|A Chain A, Crystal Structure Of Mouse Cadherin-8 Ec1-3 Length = 322 Back     alignment and structure
>pdb|2A62|A Chain A, Crystal Structure Of Mouse Cadherin-8 Ec1-3 Length = 322 Back     alignment and structure
>pdb|1Q55|A Chain A, W-Shaped Trans Interactions Of Cadherins Model Based On Fitting C- Cadherin (1l3w) To 3d Map Of Desmosomes Obtained By Electron Tomography Length = 880 Back     alignment and structure
>pdb|1Q55|A Chain A, W-Shaped Trans Interactions Of Cadherins Model Based On Fitting C- Cadherin (1l3w) To 3d Map Of Desmosomes Obtained By Electron Tomography Length = 880 Back     alignment and structure
>pdb|1L3W|A Chain A, C-Cadherin Ectodomain Length = 546 Back     alignment and structure
>pdb|1L3W|A Chain A, C-Cadherin Ectodomain Length = 546 Back     alignment and structure
>pdb|3Q2V|A Chain A, Crystal Structure Of Mouse E-Cadherin Ectodomain Length = 550 Back     alignment and structure
>pdb|3Q2V|A Chain A, Crystal Structure Of Mouse E-Cadherin Ectodomain Length = 550 Back     alignment and structure
>pdb|3Q2W|A Chain A, Crystal Structure Of Mouse N-Cadherin Ectodomain Length = 559 Back     alignment and structure
>pdb|3Q2W|A Chain A, Crystal Structure Of Mouse N-Cadherin Ectodomain Length = 559 Back     alignment and structure
>pdb|1EDH|A Chain A, E-Cadherin Domains 1 And 2 In Complex With Calcium Length = 226 Back     alignment and structure
>pdb|1EDH|A Chain A, E-Cadherin Domains 1 And 2 In Complex With Calcium Length = 226 Back     alignment and structure
>pdb|2A4E|A Chain A, Crystal Structure Of Mouse Cadherin-11 Ec1-2 Length = 215 Back     alignment and structure
>pdb|3LND|A Chain A, Crystal Structure Of Cadherin-6 Ec12 W4a Length = 207 Back     alignment and structure
>pdb|3K5R|A Chain A, Crystal Structure Of Mouse T-Cadherin Ec1 Ec2 Length = 218 Back     alignment and structure
>pdb|3K5R|A Chain A, Crystal Structure Of Mouse T-Cadherin Ec1 Ec2 Length = 218 Back     alignment and structure
>pdb|3K5S|A Chain A, Crystal Structure Of Chicken T-Cadherin Ec1 Ec2 Length = 217 Back     alignment and structure
>pdb|3K5S|A Chain A, Crystal Structure Of Chicken T-Cadherin Ec1 Ec2 Length = 217 Back     alignment and structure
>pdb|1FF5|A Chain A, Structure Of E-Cadherin Double Domain Length = 219 Back     alignment and structure
>pdb|1FF5|A Chain A, Structure Of E-Cadherin Double Domain Length = 219 Back     alignment and structure
>pdb|1NCJ|A Chain A, N-Cadherin, Two-Domain Fragment Length = 215 Back     alignment and structure
>pdb|1NCJ|A Chain A, N-Cadherin, Two-Domain Fragment Length = 215 Back     alignment and structure
>pdb|2YST|A Chain A, Solution Structure Of The Third Cadherin Domain From Human Protocadherin 7 Length = 119 Back     alignment and structure
>pdb|3LNI|A Chain A, Crystal Structure Of E-Cadherin Ec12 E89a Length = 213 Back     alignment and structure
>pdb|3LNI|A Chain A, Crystal Structure Of E-Cadherin Ec12 E89a Length = 213 Back     alignment and structure
>pdb|3LNI|A Chain A, Crystal Structure Of E-Cadherin Ec12 E89a Length = 213 Back     alignment and structure
>pdb|4AQE|A Chain A, Crystal Structure Of Deafness Associated Mutant Mouse Cadherin-23 Ec1-2s70p And Protocadherin-15 Ec1-2 Form I Length = 214 Back     alignment and structure
>pdb|3MVS|A Chain A, Structure Of The N-Terminus Of Cadherin 23 Length = 210 Back     alignment and structure
>pdb|3MVS|A Chain A, Structure Of The N-Terminus Of Cadherin 23 Length = 210 Back     alignment and structure
>pdb|2EE0|A Chain A, Solution Structures Of The Ca Domain Of Human Protocadherin 9 Length = 114 Back     alignment and structure
>pdb|2EE0|A Chain A, Solution Structures Of The Ca Domain Of Human Protocadherin 9 Length = 114 Back     alignment and structure
>pdb|1SUH|A Chain A, Amino-Terminal Domain Of Epithelial Cadherin In The Calcium Bound State, Nmr, 20 Structures Length = 146 Back     alignment and structure
>pdb|1SUH|A Chain A, Amino-Terminal Domain Of Epithelial Cadherin In The Calcium Bound State, Nmr, 20 Structures Length = 146 Back     alignment and structure
>pdb|2QVI|A Chain A, Crystal Structure Of N-Cadherin Domains Ec12 Length = 215 Back     alignment and structure
>pdb|2QVI|A Chain A, Crystal Structure Of N-Cadherin Domains Ec12 Length = 215 Back     alignment and structure
>pdb|3LNE|A Chain A, Crystal Structure Of E-Cadherin Ec12 K14e Length = 213 Back     alignment and structure
>pdb|3LNE|A Chain A, Crystal Structure Of E-Cadherin Ec12 K14e Length = 213 Back     alignment and structure
>pdb|1Q1P|A Chain A, E-Cadherin Activation Length = 212 Back     alignment and structure
>pdb|1Q1P|A Chain A, E-Cadherin Activation Length = 212 Back     alignment and structure
>pdb|3Q2N|A Chain A, Mouse E-Cadherin Ec1-2 L175d Mutant Length = 213 Back     alignment and structure
>pdb|3Q2N|A Chain A, Mouse E-Cadherin Ec1-2 L175d Mutant Length = 213 Back     alignment and structure
>pdb|3Q2N|A Chain A, Mouse E-Cadherin Ec1-2 L175d Mutant Length = 213 Back     alignment and structure
>pdb|2QVF|B Chain B, Mouse E-cadherin Domains 1,2 Length = 213 Back     alignment and structure
>pdb|2QVF|B Chain B, Mouse E-cadherin Domains 1,2 Length = 213 Back     alignment and structure
>pdb|3QRB|A Chain A, Crystal Structure Of E-Cadherin Ec1-2 P5a P6a Length = 213 Back     alignment and structure
>pdb|3QRB|A Chain A, Crystal Structure Of E-Cadherin Ec1-2 P5a P6a Length = 213 Back     alignment and structure
>pdb|3LNG|A Chain A, Crystal Structure Of E-Cadherin Ec12 Aa Extension Length = 215 Back     alignment and structure
>pdb|3LNG|A Chain A, Crystal Structure Of E-Cadherin Ec12 Aa Extension Length = 215 Back     alignment and structure
>pdb|3LNH|A Chain A, Crystal Structure Of E-Cadherin Ec12 W2a Length = 213 Back     alignment and structure
>pdb|3LNH|A Chain A, Crystal Structure Of E-Cadherin Ec12 W2a Length = 213 Back     alignment and structure
>pdb|2WCP|A Chain A, Crystal Structure Of Mouse Cadherin-23 Ec1-2 Length = 214 Back     alignment and structure
>pdb|3LNF|A Chain A, Crystal Structure Of E-Cadherin Ec12 K14ew2a Length = 213 Back     alignment and structure
>pdb|3LNF|A Chain A, Crystal Structure Of E-Cadherin Ec12 K14ew2a Length = 213 Back     alignment and structure
>pdb|3Q2L|A Chain A, Mouse E-Cadherin Ec1-2 V81d Mutant Length = 213 Back     alignment and structure
>pdb|3Q2L|A Chain A, Mouse E-Cadherin Ec1-2 V81d Mutant Length = 213 Back     alignment and structure
>pdb|2WD0|A Chain A, Crystal Structure Of Nonsyndromic Deafness (Dfnb12) Associated Mutant D124g Of Mouse Cadherin-23 Ec1-2 Length = 214 Back     alignment and structure
>pdb|2O72|A Chain A, Crystal Structure Analysis Of Human E-Cadherin (1-213) Length = 213 Back     alignment and structure
>pdb|2O72|A Chain A, Crystal Structure Analysis Of Human E-Cadherin (1-213) Length = 213 Back     alignment and structure
>pdb|2O72|A Chain A, Crystal Structure Analysis Of Human E-Cadherin (1-213) Length = 213 Back     alignment and structure
>pdb|4APX|B Chain B, Crystal Structure Of Mouse Cadherin-23 Ec1-2 And Protocadherin-15 Ec1-2 Form I Length = 242 Back     alignment and structure
>pdb|3PPE|A Chain A, Crystal Structure Of Chicken Ve-Cadherin Ec1-2 Length = 203 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query817
3ubh_A419 Neural-cadherin; cell adhesion; 2.70A {Drosophila 1e-101
3ubh_A419 Neural-cadherin; cell adhesion; 2.70A {Drosophila 4e-69
3ubh_A419 Neural-cadherin; cell adhesion; 2.70A {Drosophila 6e-65
3ubh_A419 Neural-cadherin; cell adhesion; 2.70A {Drosophila 6e-51
3ubh_A 419 Neural-cadherin; cell adhesion; 2.70A {Drosophila 2e-34
3ubh_A419 Neural-cadherin; cell adhesion; 2.70A {Drosophila 1e-20
1q55_A 880 EP-cadherin, C-cadherin; trans interaction, desmos 8e-92
1q55_A880 EP-cadherin, C-cadherin; trans interaction, desmos 2e-74
1q55_A 880 EP-cadherin, C-cadherin; trans interaction, desmos 4e-73
1q55_A 880 EP-cadherin, C-cadherin; trans interaction, desmos 1e-68
1q55_A880 EP-cadherin, C-cadherin; trans interaction, desmos 4e-58
1q55_A880 EP-cadherin, C-cadherin; trans interaction, desmos 2e-26
1q55_A 880 EP-cadherin, C-cadherin; trans interaction, desmos 2e-11
3q2w_A559 Cadherin-2; cell adhesion, calcium binding; HET: M 1e-81
3q2w_A559 Cadherin-2; cell adhesion, calcium binding; HET: M 8e-80
3q2w_A559 Cadherin-2; cell adhesion, calcium binding; HET: M 3e-64
3q2w_A 559 Cadherin-2; cell adhesion, calcium binding; HET: M 1e-57
3q2w_A 559 Cadherin-2; cell adhesion, calcium binding; HET: M 1e-51
3q2w_A 559 Cadherin-2; cell adhesion, calcium binding; HET: M 2e-33
3q2w_A559 Cadherin-2; cell adhesion, calcium binding; HET: M 1e-31
3q2v_A550 Cadherin-1; cell adhesion, calcium binding; HET: M 1e-80
3q2v_A550 Cadherin-1; cell adhesion, calcium binding; HET: M 5e-78
3q2v_A550 Cadherin-1; cell adhesion, calcium binding; HET: M 2e-64
3q2v_A 550 Cadherin-1; cell adhesion, calcium binding; HET: M 9e-57
3q2v_A 550 Cadherin-1; cell adhesion, calcium binding; HET: M 1e-52
3q2v_A550 Cadherin-1; cell adhesion, calcium binding; HET: M 1e-34
1l3w_A546 EP-cadherin, C-cadherin; cell adhesion, calcium bi 3e-75
1l3w_A546 EP-cadherin, C-cadherin; cell adhesion, calcium bi 2e-73
1l3w_A546 EP-cadherin, C-cadherin; cell adhesion, calcium bi 1e-60
1l3w_A 546 EP-cadherin, C-cadherin; cell adhesion, calcium bi 2e-51
1l3w_A 546 EP-cadherin, C-cadherin; cell adhesion, calcium bi 2e-32
1l3w_A546 EP-cadherin, C-cadherin; cell adhesion, calcium bi 6e-29
3ubf_A316 Neural-cadherin; cell adhesion; 2.50A {Drosophila 9e-66
3ubf_A316 Neural-cadherin; cell adhesion; 2.50A {Drosophila 1e-50
3ubf_A316 Neural-cadherin; cell adhesion; 2.50A {Drosophila 2e-49
3ubf_A316 Neural-cadherin; cell adhesion; 2.50A {Drosophila 1e-45
3ubf_A316 Neural-cadherin; cell adhesion; 2.50A {Drosophila 6e-43
3ubf_A 316 Neural-cadherin; cell adhesion; 2.50A {Drosophila 5e-35
3ubf_A 316 Neural-cadherin; cell adhesion; 2.50A {Drosophila 9e-05
2a62_A322 Cadherin-8; extracellular domain, homodimer, calci 5e-54
2a62_A322 Cadherin-8; extracellular domain, homodimer, calci 3e-49
2a62_A322 Cadherin-8; extracellular domain, homodimer, calci 1e-44
2a62_A322 Cadherin-8; extracellular domain, homodimer, calci 1e-41
2a62_A 322 Cadherin-8; extracellular domain, homodimer, calci 5e-36
2a62_A322 Cadherin-8; extracellular domain, homodimer, calci 8e-29
3mvs_A210 Cadherin-23, otocadherin; adhesion, extracellular 7e-47
3mvs_A210 Cadherin-23, otocadherin; adhesion, extracellular 8e-46
3mvs_A210 Cadherin-23, otocadherin; adhesion, extracellular 4e-44
3mvs_A210 Cadherin-23, otocadherin; adhesion, extracellular 2e-35
3mvs_A210 Cadherin-23, otocadherin; adhesion, extracellular 2e-14
2qvi_A215 Cadherin-2; beta barrel, strand SWAP, domain SWAP, 7e-41
2qvi_A215 Cadherin-2; beta barrel, strand SWAP, domain SWAP, 2e-34
2qvi_A215 Cadherin-2; beta barrel, strand SWAP, domain SWAP, 1e-32
2qvi_A215 Cadherin-2; beta barrel, strand SWAP, domain SWAP, 3e-27
2qvi_A215 Cadherin-2; beta barrel, strand SWAP, domain SWAP, 5e-23
2qvi_A215 Cadherin-2; beta barrel, strand SWAP, domain SWAP, 4e-14
3lnd_A207 CDH6 protein, cadherin 6; cell adhesion, cell memb 2e-40
3lnd_A207 CDH6 protein, cadherin 6; cell adhesion, cell memb 2e-35
3lnd_A207 CDH6 protein, cadherin 6; cell adhesion, cell memb 3e-34
3lnd_A207 CDH6 protein, cadherin 6; cell adhesion, cell memb 1e-27
3lnd_A207 CDH6 protein, cadherin 6; cell adhesion, cell memb 3e-23
3lnd_A207 CDH6 protein, cadherin 6; cell adhesion, cell memb 1e-12
2a4e_A215 Cadherin-11; dimer, calcium binding, cell adhesion 2e-40
2a4e_A215 Cadherin-11; dimer, calcium binding, cell adhesion 3e-39
2a4e_A215 Cadherin-11; dimer, calcium binding, cell adhesion 1e-36
2a4e_A215 Cadherin-11; dimer, calcium binding, cell adhesion 1e-34
2a4e_A215 Cadherin-11; dimer, calcium binding, cell adhesion 1e-12
2x2u_A246 Proto-oncogene tyrosine-protein kinase receptor RE 3e-40
2x2u_A246 Proto-oncogene tyrosine-protein kinase receptor RE 2e-36
2x2u_A246 Proto-oncogene tyrosine-protein kinase receptor RE 3e-33
2x2u_A246 Proto-oncogene tyrosine-protein kinase receptor RE 2e-32
2x2u_A246 Proto-oncogene tyrosine-protein kinase receptor RE 2e-22
2x2u_A246 Proto-oncogene tyrosine-protein kinase receptor RE 2e-13
2x2u_A 246 Proto-oncogene tyrosine-protein kinase receptor RE 2e-10
3k5r_A218 Cadherin 13; mouse, structural protein; 2.00A {Mus 5e-40
3k5r_A218 Cadherin 13; mouse, structural protein; 2.00A {Mus 8e-36
3k5r_A218 Cadherin 13; mouse, structural protein; 2.00A {Mus 7e-30
3k5r_A218 Cadherin 13; mouse, structural protein; 2.00A {Mus 7e-26
3k5r_A218 Cadherin 13; mouse, structural protein; 2.00A {Mus 8e-14
3qrb_A213 Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu 5e-39
3qrb_A213 Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu 7e-37
3qrb_A213 Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu 5e-33
3qrb_A213 Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu 2e-25
3qrb_A213 Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu 9e-13
3ppe_A203 Vascular endothelial cadherin; extracellular cadhe 2e-38
3ppe_A203 Vascular endothelial cadherin; extracellular cadhe 2e-36
3ppe_A203 Vascular endothelial cadherin; extracellular cadhe 5e-32
3ppe_A203 Vascular endothelial cadherin; extracellular cadhe 2e-30
3ppe_A203 Vascular endothelial cadherin; extracellular cadhe 5e-13
3ppe_A 203 Vascular endothelial cadherin; extracellular cadhe 3e-04
2yst_A119 Protocadherin-7; BH-PCDH, beta-sandwich, structura 8e-36
2yst_A119 Protocadherin-7; BH-PCDH, beta-sandwich, structura 1e-22
2yst_A119 Protocadherin-7; BH-PCDH, beta-sandwich, structura 4e-22
2yst_A119 Protocadherin-7; BH-PCDH, beta-sandwich, structura 1e-20
2yst_A119 Protocadherin-7; BH-PCDH, beta-sandwich, structura 6e-11
2yst_A119 Protocadherin-7; BH-PCDH, beta-sandwich, structura 2e-10
2ee0_A114 Protocadherin-9; Ca domain, structural genomics, N 6e-29
2ee0_A114 Protocadherin-9; Ca domain, structural genomics, N 9e-22
2ee0_A114 Protocadherin-9; Ca domain, structural genomics, N 2e-21
2ee0_A114 Protocadherin-9; Ca domain, structural genomics, N 8e-19
2ee0_A114 Protocadherin-9; Ca domain, structural genomics, N 2e-10
2ee0_A114 Protocadherin-9; Ca domain, structural genomics, N 1e-08
2yqg_A123 Desmoglein-2, HDGC; cadherin, structural genomics, 1e-23
2yqg_A123 Desmoglein-2, HDGC; cadherin, structural genomics, 4e-16
2yqg_A123 Desmoglein-2, HDGC; cadherin, structural genomics, 4e-11
2yqg_A123 Desmoglein-2, HDGC; cadherin, structural genomics, 5e-08
2yqg_A123 Desmoglein-2, HDGC; cadherin, structural genomics, 1e-07
2yqg_A123 Desmoglein-2, HDGC; cadherin, structural genomics, 2e-06
1ncg_A110 N-cadherin; cell adhesion protein; 2.10A {Mus musc 1e-23
1ncg_A110 N-cadherin; cell adhesion protein; 2.10A {Mus musc 4e-18
1ncg_A110 N-cadherin; cell adhesion protein; 2.10A {Mus musc 5e-11
1ncg_A110 N-cadherin; cell adhesion protein; 2.10A {Mus musc 4e-09
1ncg_A110 N-cadherin; cell adhesion protein; 2.10A {Mus musc 1e-08
1ncg_A110 N-cadherin; cell adhesion protein; 2.10A {Mus musc 4e-06
3k6f_A100 T-cadherin; cell adhesion, calcium, cell membrane, 4e-19
3k6f_A100 T-cadherin; cell adhesion, calcium, cell membrane, 3e-09
3k6f_A100 T-cadherin; cell adhesion, calcium, cell membrane, 4e-09
3k6f_A100 T-cadherin; cell adhesion, calcium, cell membrane, 5e-09
3k6f_A100 T-cadherin; cell adhesion, calcium, cell membrane, 1e-07
3k6f_A100 T-cadherin; cell adhesion, calcium, cell membrane, 4e-05
3k6d_A99 T-cadherin; cell adhesion; 1.80A {Xenopus laevis} 7e-18
3k6d_A99 T-cadherin; cell adhesion; 1.80A {Xenopus laevis} 2e-09
3k6d_A99 T-cadherin; cell adhesion; 1.80A {Xenopus laevis} 1e-08
3k6d_A99 T-cadherin; cell adhesion; 1.80A {Xenopus laevis} 7e-08
3k6d_A99 T-cadherin; cell adhesion; 1.80A {Xenopus laevis} 1e-07
3k6d_A99 T-cadherin; cell adhesion; 1.80A {Xenopus laevis} 5e-05
3k6i_A99 T-cadherin; cell adhesion, alternative splicing, c 1e-16
3k6i_A99 T-cadherin; cell adhesion, alternative splicing, c 8e-09
3k6i_A99 T-cadherin; cell adhesion, alternative splicing, c 5e-07
3k6i_A99 T-cadherin; cell adhesion, alternative splicing, c 1e-06
3k6i_A99 T-cadherin; cell adhesion, alternative splicing, c 8e-06
1zvn_A99 Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal 2e-16
1zvn_A99 Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal 7e-13
1zvn_A99 Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal 2e-07
1zvn_A99 Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal 4e-07
1zvn_A99 Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal 1e-06
1zvn_A99 Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal 2e-04
2omz_B105 Epithelial-cadherin; leucine-rich-repeat, nvasion 5e-15
2omz_B105 Epithelial-cadherin; leucine-rich-repeat, nvasion 9e-14
2omz_B105 Epithelial-cadherin; leucine-rich-repeat, nvasion 8e-08
2omz_B105 Epithelial-cadherin; leucine-rich-repeat, nvasion 1e-07
2omz_B105 Epithelial-cadherin; leucine-rich-repeat, nvasion 2e-04
2omz_B105 Epithelial-cadherin; leucine-rich-repeat, nvasion 4e-04
1zxk_A98 Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu 7e-13
1zxk_A98 Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu 3e-12
1zxk_A98 Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu 2e-06
1zxk_A98 Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu 1e-05
1zxk_A98 Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu 2e-05
1zxk_A98 Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu 6e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1wyj_A125 Protocadherin beta 14; SS bond, structural genomic 3e-05
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Length = 419 Back     alignment and structure
 Score =  318 bits (818), Expect = e-101
 Identities = 273/385 (70%), Positives = 295/385 (76%), Gaps = 64/385 (16%)

Query: 84  TDNQRVIIHVKDVNDESPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSDHNIHYFIV 143
           TDNQRVII VKDVNDE PYFINRPLPMQAVVQLNAPPNTPVFTLQARDPD+DHNIHYFIV
Sbjct: 92  TDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHNIHYFIV 151

Query: 144 RDRTGGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAEDQNGRKDERKFQSTPEERLSIV 203
           RDRTGGRFEVDERSGVVRTRGTD FQLD EYVLYVKAEDQNG+ D+R+FQSTPEERLSIV
Sbjct: 152 RDRTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIV 211

Query: 204 GGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQVYTPNVD 263
           GGKRAPQFYMPSYEAEIPENQK                                      
Sbjct: 212 GGKRAPQFYMPSYEAEIPENQK-------------------------------------- 233

Query: 264 ENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIV 323
                ++ + ++ A                   DREIRYTLKAQGQGAGTFNIGPTSGIV
Sbjct: 234 ----KDSDIISIKAKSFA---------------DREIRYTLKAQGQGAGTFNIGPTSGIV 274

Query: 324 KLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNI 383
           KLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSV+LTIRVTDVNDNAPKFELPDYQAHN+
Sbjct: 275 KLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNV 334

Query: 384 DEDITTGTSILKVKATDADSGTNAEIEYHVSDDNFAVDSNGVINNHKTLDADNNNAYYEF 443
           DEDI  GTSIL+VKA D+DSG+NAEIEY VSDD+FAVDSNG+I N+K LDADNNNAYYEF
Sbjct: 335 DEDIPLGTSILRVKAMDSDSGSNAEIEYLVSDDHFAVDSNGIIVNNKQLDADNNNAYYEF 394

Query: 444 VITAKDK-------DVDVELDVVDR 461
           ++TAKDK          V +   ++
Sbjct: 395 IVTAKDKGEPPKSGVATVRVYTKNK 419
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Length = 419 Back     alignment and structure
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Length = 419 Back     alignment and structure
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Length = 419 Back     alignment and structure
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Length = 419 Back     alignment and structure
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Length = 419 Back     alignment and structure
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Length = 880 Back     alignment and structure
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Length = 880 Back     alignment and structure
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Length = 880 Back     alignment and structure
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Length = 880 Back     alignment and structure
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Length = 880 Back     alignment and structure
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Length = 880 Back     alignment and structure
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Length = 880 Back     alignment and structure
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Length = 559 Back     alignment and structure
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Length = 559 Back     alignment and structure
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Length = 559 Back     alignment and structure
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Length = 559 Back     alignment and structure
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Length = 559 Back     alignment and structure
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Length = 559 Back     alignment and structure
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Length = 550 Back     alignment and structure
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Length = 550 Back     alignment and structure
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Length = 550 Back     alignment and structure
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Length = 550 Back     alignment and structure
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Length = 550 Back     alignment and structure
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Length = 550 Back     alignment and structure
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Length = 546 Back     alignment and structure
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Length = 546 Back     alignment and structure
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Length = 546 Back     alignment and structure
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Length = 546 Back     alignment and structure
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Length = 546 Back     alignment and structure
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Length = 546 Back     alignment and structure
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Length = 316 Back     alignment and structure
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Length = 316 Back     alignment and structure
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Length = 316 Back     alignment and structure
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Length = 316 Back     alignment and structure
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Length = 316 Back     alignment and structure
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Length = 316 Back     alignment and structure
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Length = 316 Back     alignment and structure
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Length = 322 Back     alignment and structure
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Length = 322 Back     alignment and structure
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Length = 322 Back     alignment and structure
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Length = 322 Back     alignment and structure
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Length = 322 Back     alignment and structure
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Length = 322 Back     alignment and structure
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 2wcp_A 2whv_A 2wd0_A 2wbx_A Length = 210 Back     alignment and structure
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 2wcp_A 2whv_A 2wd0_A 2wbx_A Length = 210 Back     alignment and structure
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 2wcp_A 2whv_A 2wd0_A 2wbx_A Length = 210 Back     alignment and structure
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 2wcp_A 2whv_A 2wd0_A 2wbx_A Length = 210 Back     alignment and structure
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 2wcp_A 2whv_A 2wd0_A 2wbx_A Length = 210 Back     alignment and structure
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Length = 215 Back     alignment and structure
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Length = 215 Back     alignment and structure
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Length = 215 Back     alignment and structure
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Length = 215 Back     alignment and structure
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Length = 215 Back     alignment and structure
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Length = 215 Back     alignment and structure
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Length = 207 Back     alignment and structure
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Length = 207 Back     alignment and structure
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Length = 207 Back     alignment and structure
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Length = 207 Back     alignment and structure
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Length = 207 Back     alignment and structure
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Length = 207 Back     alignment and structure
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Length = 215 Back     alignment and structure
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Length = 215 Back     alignment and structure
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Length = 215 Back     alignment and structure
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Length = 215 Back     alignment and structure
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Length = 215 Back     alignment and structure
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Length = 246 Back     alignment and structure
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Length = 246 Back     alignment and structure
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Length = 246 Back     alignment and structure
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Length = 246 Back     alignment and structure
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Length = 246 Back     alignment and structure
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Length = 246 Back     alignment and structure
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Length = 246 Back     alignment and structure
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A Length = 218 Back     alignment and structure
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A Length = 218 Back     alignment and structure
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A Length = 218 Back     alignment and structure
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A Length = 218 Back     alignment and structure
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A Length = 218 Back     alignment and structure
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Length = 213 Back     alignment and structure
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Length = 213 Back     alignment and structure
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Length = 213 Back     alignment and structure
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Length = 213 Back     alignment and structure
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Length = 213 Back     alignment and structure
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Length = 203 Back     alignment and structure
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Length = 203 Back     alignment and structure
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Length = 203 Back     alignment and structure
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Length = 203 Back     alignment and structure
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Length = 203 Back     alignment and structure
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Length = 203 Back     alignment and structure
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119 Back     alignment and structure
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119 Back     alignment and structure
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119 Back     alignment and structure
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119 Back     alignment and structure
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119 Back     alignment and structure
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119 Back     alignment and structure
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 114 Back     alignment and structure
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 114 Back     alignment and structure
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 114 Back     alignment and structure
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 114 Back     alignment and structure
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 114 Back     alignment and structure
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 114 Back     alignment and structure
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 123 Back     alignment and structure
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 123 Back     alignment and structure
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 123 Back     alignment and structure
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 123 Back     alignment and structure
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 123 Back     alignment and structure
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 123 Back     alignment and structure
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Length = 110 Back     alignment and structure
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Length = 110 Back     alignment and structure
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Length = 110 Back     alignment and structure
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Length = 110 Back     alignment and structure
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Length = 110 Back     alignment and structure
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Length = 110 Back     alignment and structure
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Length = 100 Back     alignment and structure
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Length = 100 Back     alignment and structure
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Length = 100 Back     alignment and structure
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Length = 100 Back     alignment and structure
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Length = 100 Back     alignment and structure
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Length = 100 Back     alignment and structure
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Length = 99 Back     alignment and structure
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Length = 99 Back     alignment and structure
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Length = 99 Back     alignment and structure
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Length = 99 Back     alignment and structure
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Length = 99 Back     alignment and structure
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Length = 99 Back     alignment and structure
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus} Length = 99 Back     alignment and structure
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus} Length = 99 Back     alignment and structure
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus} Length = 99 Back     alignment and structure
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus} Length = 99 Back     alignment and structure
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus} Length = 99 Back     alignment and structure
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus} Length = 99 Back     alignment and structure
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus} Length = 99 Back     alignment and structure
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus} Length = 99 Back     alignment and structure
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus} Length = 99 Back     alignment and structure
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus} Length = 99 Back     alignment and structure
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus} Length = 99 Back     alignment and structure
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B Length = 105 Back     alignment and structure
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B Length = 105 Back     alignment and structure
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B Length = 105 Back     alignment and structure
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B Length = 105 Back     alignment and structure
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B Length = 105 Back     alignment and structure
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B Length = 105 Back     alignment and structure
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A Length = 98 Back     alignment and structure
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A Length = 98 Back     alignment and structure
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A Length = 98 Back     alignment and structure
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A Length = 98 Back     alignment and structure
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A Length = 98 Back     alignment and structure
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A Length = 98 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus} Length = 125 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query817
1q55_A 880 EP-cadherin, C-cadherin; trans interaction, desmos 100.0
3q2w_A559 Cadherin-2; cell adhesion, calcium binding; HET: M 100.0
3q2v_A550 Cadherin-1; cell adhesion, calcium binding; HET: M 100.0
1l3w_A546 EP-cadherin, C-cadherin; cell adhesion, calcium bi 100.0
1q55_A880 EP-cadherin, C-cadherin; trans interaction, desmos 100.0
3q2w_A559 Cadherin-2; cell adhesion, calcium binding; HET: M 100.0
3q2v_A550 Cadherin-1; cell adhesion, calcium binding; HET: M 100.0
1l3w_A546 EP-cadherin, C-cadherin; cell adhesion, calcium bi 100.0
3ubh_A419 Neural-cadherin; cell adhesion; 2.70A {Drosophila 100.0
3ubh_A419 Neural-cadherin; cell adhesion; 2.70A {Drosophila 100.0
2a62_A322 Cadherin-8; extracellular domain, homodimer, calci 100.0
3ubf_A316 Neural-cadherin; cell adhesion; 2.50A {Drosophila 100.0
2a62_A322 Cadherin-8; extracellular domain, homodimer, calci 100.0
3ubf_A316 Neural-cadherin; cell adhesion; 2.50A {Drosophila 100.0
3mvs_A210 Cadherin-23, otocadherin; adhesion, extracellular 100.0
2a4e_A215 Cadherin-11; dimer, calcium binding, cell adhesion 100.0
2x2u_A246 Proto-oncogene tyrosine-protein kinase receptor RE 100.0
3mvs_A210 Cadherin-23, otocadherin; adhesion, extracellular 100.0
2x2u_A246 Proto-oncogene tyrosine-protein kinase receptor RE 100.0
2a4e_A215 Cadherin-11; dimer, calcium binding, cell adhesion 100.0
2qvi_A215 Cadherin-2; beta barrel, strand SWAP, domain SWAP, 100.0
3qrb_A213 Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu 100.0
3ppe_A203 Vascular endothelial cadherin; extracellular cadhe 100.0
3k5r_A218 Cadherin 13; mouse, structural protein; 2.00A {Mus 100.0
3lnd_A207 CDH6 protein, cadherin 6; cell adhesion, cell memb 100.0
2qvi_A215 Cadherin-2; beta barrel, strand SWAP, domain SWAP, 100.0
3ppe_A203 Vascular endothelial cadherin; extracellular cadhe 100.0
3qrb_A213 Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu 100.0
3k5r_A218 Cadherin 13; mouse, structural protein; 2.00A {Mus 100.0
3lnd_A207 CDH6 protein, cadherin 6; cell adhesion, cell memb 99.98
4apx_B242 Protocadherin-15, otocadherin; cell adhesion, hear 99.97
4apx_B242 Protocadherin-15, otocadherin; cell adhesion, hear 99.95
2yst_A119 Protocadherin-7; BH-PCDH, beta-sandwich, structura 99.93
2yst_A119 Protocadherin-7; BH-PCDH, beta-sandwich, structura 99.9
2ee0_A114 Protocadherin-9; Ca domain, structural genomics, N 99.89
2ee0_A114 Protocadherin-9; Ca domain, structural genomics, N 99.87
2yqg_A123 Desmoglein-2, HDGC; cadherin, structural genomics, 99.84
1ncg_A110 N-cadherin; cell adhesion protein; 2.10A {Mus musc 99.79
2yqg_A123 Desmoglein-2, HDGC; cadherin, structural genomics, 99.78
1ncg_A110 N-cadherin; cell adhesion protein; 2.10A {Mus musc 99.71
1wyj_A125 Protocadherin beta 14; SS bond, structural genomic 99.7
1wyj_A125 Protocadherin beta 14; SS bond, structural genomic 99.68
1zvn_A99 Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal 99.66
1zxk_A98 Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu 99.65
1zvn_A99 Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal 99.63
1zxk_A98 Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu 99.63
3k6d_A99 T-cadherin; cell adhesion; 1.80A {Xenopus laevis} 99.62
3k6f_A100 T-cadherin; cell adhesion, calcium, cell membrane, 99.61
2omz_B105 Epithelial-cadherin; leucine-rich-repeat, nvasion 99.6
3k6i_A99 T-cadherin; cell adhesion, alternative splicing, c 99.59
3k6d_A99 T-cadherin; cell adhesion; 1.80A {Xenopus laevis} 99.58
3k6f_A100 T-cadherin; cell adhesion, calcium, cell membrane, 99.56
3k6i_A99 T-cadherin; cell adhesion, alternative splicing, c 99.54
2omz_B105 Epithelial-cadherin; leucine-rich-repeat, nvasion 99.47
1wuz_A103 Pcdha4 protein, CNR-EC1; cadherin, heteronuclear p 99.34
1wuz_A103 Pcdha4 protein, CNR-EC1; cadherin, heteronuclear p 99.32
3pdd_A190 Glycoside hydrolase, family 9; CBHA, beta-sandwich 95.28
3pdd_A190 Glycoside hydrolase, family 9; CBHA, beta-sandwich 95.19
1op4_A159 Neural-cadherin; beta sandwich, cadherin-like doma 92.72
3rb5_A298 Na/Ca exchange protein; CBD12, calcium binding and 92.4
3rb5_A298 Na/Ca exchange protein; CBD12, calcium binding and 88.66
2yhg_A437 SDE_182CT, cellulose-binding protein; hydrolase, g 88.1
1op4_A159 Neural-cadherin; beta sandwich, cadherin-like doma 81.49
3us9_A295 Sodium/calcium exchanger 1; beta-sandwich, calcium 80.36
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Back     alignment and structure
Probab=100.00  E-value=1.2e-84  Score=787.10  Aligned_cols=594  Identities=23%  Similarity=0.325  Sum_probs=408.6

Q ss_pred             EEEEEEEEecCCCCCeeecCCCCeEEEEe-ccCCCCceEEEEEeecCCCCccEEEEEEecCCCCceEEEcceeEEEeccC
Q psy11097         87 QRVIIHVKDVNDESPYFINRPLPMQAVVQ-LNAPPNTPVFTLQARDPDSDHNIHYFIVRDRTGGRFEVDERSGVVRTRGT  165 (817)
Q Consensus        87 ~~v~I~V~DvNDn~P~F~~~~~~~~~~v~-E~~~~gt~v~~v~A~D~D~g~~~~y~l~~~~~~~~F~Id~~tG~i~~~~~  165 (817)
                      +...+.|.|+|||+|+|.+..  |.++|+ |++++|+.|++|+|+|+|.+..++|++.    ++.|+|++ +|.|+++++
T Consensus        21 q~~~~~~~d~ndn~P~F~~~~--y~~~v~~e~~~~Gt~V~~v~a~D~D~n~~i~Y~~~----~~~F~Id~-~G~i~~~~~   93 (880)
T 1q55_A           21 QVVPSINADVSGCKPGFSSAE--YIFSVNRRELERGRKLGKVNFSDCTTRKHGLYDVG----DSRFRVLP-DGTVLVKRH   93 (880)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             hheeeecccccCCCCccCCCe--EEEEechhhCCCCCEEEEEEEEeCCCCceEEEEeC----CCCEEECC-CceEEECCc
Confidence            566778999999999998764  677898 9999999999999999996555889874    35899998 899999999


Q ss_pred             CCcccccEEEEEEEEEecCCcccccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEEEEE-Ee
Q psy11097        166 DPFQLDQEYVLYVKAEDQNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIY-TK  244 (817)
Q Consensus       166 ld~e~~~~y~l~v~a~D~~g~~~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v~I~-V~  244 (817)
                      ||||..  |.|+|+|+|+++.                                               ..++.|+|. |.
T Consensus        94 Ld~e~~--~~l~V~A~D~~~~-----------------------------------------------~~~~~v~v~~v~  124 (880)
T 1q55_A           94 VKLHKD--TKFTISTWDARGI-----------------------------------------------KHSTNIAVASKR  124 (880)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccc--eEEEEEEEcCCCC-----------------------------------------------eEEEEEEEEEec
Confidence            999976  9999999997542                                               112334444 22


Q ss_pred             eC----------CCCCCcCcCcee------------eEEEeCCCC--CCcEEEEEEEEeCCCCCceeEEEeecccCCccE
Q psy11097        245 NK----------NDEEPKFSQQVY------------TPNVDENAG--PNTLVTTVVASDKDGDNVSIISVKAKSFADREI  300 (817)
Q Consensus       245 Dv----------NDn~P~f~~~~y------------~~~V~En~~--~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i  300 (817)
                      +.          |+++|.|....|            .++|+||++  .+..++++.+ |.|.              ++.+
T Consensus       125 ~~~~~~~~~~~~~~~~p~f~~~~~~~~r~~r~~~~~~~~v~En~~~~~~~~v~~v~~-d~d~--------------~~~v  189 (880)
T 1q55_A          125 HRSGEEAHSRSSKLPVLTFPETHTGLKRKKRDWVIPPIKVSENERGPFPKRLVQIKS-NKDR--------------FNKV  189 (880)
T ss_dssp             -------------------------------CCCCCCEEEESSCCSSSCEEEEECCC-SGGG--------------SSCE
T ss_pred             ccccccccccccccCcccccccccccceeeccccccceEEeCCCCCCCCeEEEEEee-CCCC--------------CceE
Confidence            21          566889987644            689999997  5677777764 4442              4789


Q ss_pred             EEEEEeCCC---CCCCeEEeCceeEEEeCccCCccccCCCeEEEEEEEEEeCCC-CceEEEEEEEEEEeeCCCCCcccCC
Q psy11097        301 RYTLKAQGQ---GAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVELTIRVTDVNDNAPKFELP  376 (817)
Q Consensus       301 ~y~l~~~g~---~~~~F~Id~~tG~i~~~~~LD~E~~~~~~~y~l~V~a~d~~g-~~~~~~~v~I~V~DvNDn~P~f~~~  376 (817)
                      +|+|...+.   ..+.|.|++.||.|++.++||||..   ..|.|+|+|+|.+| .++.++.|+|+|+|+|||+|+|.+.
T Consensus       190 ~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~---~~y~l~v~A~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~  266 (880)
T 1q55_A          190 YYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEY---DKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQD  266 (880)
T ss_dssp             EEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTC---CEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSS
T ss_pred             EEEEECCCCCCCcCCEEEEECCcCEEEECCccCcccc---CccEEEEEEEECCCCceeeeEEEEEEEEecCCCCCCccCC
Confidence            999985432   2468999999999999999999984   68999999997544 3677899999999999999999999


Q ss_pred             CcceEEeeCCCCCCcEEEEEEEEeCCCC---CCceEEEEEec--------CceEEcc-ceeEEEe-eecccCCCCcEEEE
Q psy11097        377 DYQAHNIDEDITTGTSILKVKATDADSG---TNAEIEYHVSD--------DNFAVDS-NGVINNH-KTLDADNNNAYYEF  443 (817)
Q Consensus       377 ~y~~~~V~E~~~~Gt~v~~v~A~D~D~g---~n~~i~y~i~~--------~~F~I~~-~G~i~~~-~~ld~e~~~~~~~l  443 (817)
                      .|.. .|+|++++|+.|++|.|+|+|.|   .|+.++|+|.+        +.|.|++ +|.|++. ++||||.. ..|.|
T Consensus       267 ~y~~-~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~~LDrE~~-~~y~l  344 (880)
T 1q55_A          267 VFRG-SVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKF-PEYTL  344 (880)
T ss_dssp             CEEE-EEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTC-CEEEE
T ss_pred             cEEE-EEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCCcccCCeEEEccCCccEEEecccCCHHHc-ceeEE
Confidence            9987 89999999999999999999998   68999999964        3699998 7999985 79999997 58999


Q ss_pred             EEEEecCCc-------eEEEEEEeCCCCCCccCCCccceeEeeccCCcCeEEEEEEE-------------EEEeecCCcc
Q psy11097        444 VITAKDKDV-------DVELDVVDRNNKPPLWDNAIYGPIHIRENVTVSTVVTSVKA-------------RFGFVGGSTS  503 (817)
Q Consensus       444 ~V~a~D~g~-------~v~I~V~d~Nd~~P~f~~~~y~~i~v~E~~~~g~~v~~v~a-------------~~~~~~~~~~  503 (817)
                      +|+|+|+|+       +|+|+|.|+|||+|.|.+..|.. .|+|+ ++|+.|+++.|             +|++..  +.
T Consensus       345 ~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~-~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~--~~  420 (880)
T 1q55_A          345 TVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTA-LVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV--NE  420 (880)
T ss_dssp             EEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEE-EEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC--CT
T ss_pred             EEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEE-EeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEec--CC
Confidence            999999864       79999999999999999999987 99999 99999999988             455544  46


Q ss_pred             cccEEEEc----cccEEEEcccccccccc---cEEEEEEEEeCCccccCCCCCcceeeEEEEEEEeecCCCCCccccCCC
Q psy11097        504 SGQFVIED----ITGVIRLNSKSISLDRD---KYELNVTAVDDGACCANGDQSVHTATAVVVVFITDVNDNKPVFRECST  576 (817)
Q Consensus       504 ~~~F~Id~----~tG~i~~~~~~~~ld~e---~y~l~V~a~D~~~~~~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~  576 (817)
                      .+.|.|+.    .+|.|++.+   .||||   .|.|+|+|+|++...    .+.++++++|+|+|+|+|| +|+|.+ ..
T Consensus       421 ~~~F~I~~d~~~~~G~i~~~~---~LD~E~~~~y~l~V~A~D~~~~~----~~~~sst~tV~I~V~DvND-~P~f~~-~~  491 (880)
T 1q55_A          421 GGFFNITTDPESNQGILTTAK---GLDFELRKQYVLQITVENAEPFS----VPLPTSTATVTVTVEDVNE-APFFVP-AV  491 (880)
T ss_dssp             TSCEEEEECTTTCCEEEEESS---CCCCSSCCCEEEEECCEESSCCS----SCCCCCCEEEEEEEECCCC-CCEESS-CE
T ss_pred             CceEEEEecCCCceEEEeccc---CCCcccCCcEEEEEEEEECCCCC----CCCcceeEEEEEEEEeCCC-CCEEec-Cc
Confidence            78999963    689999987   56665   799999999987421    1346889999999999999 999997 78


Q ss_pred             ceeEEecCCCCCceEEEEEEecCCCCCCceEEEEEEecCCCCCccEEEecccceEEecccccccCCC--CcEEEEEEEEE
Q psy11097        577 YYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFDREGDD--GKFVSVTIKAT  654 (817)
Q Consensus       577 ~~~~v~En~~~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~~~~~~F~Id~~tG~i~~~~~lD~E~~~--~~~~~l~V~a~  654 (817)
                      |.+.|.|+.++|+.|++|.|+|+|.|.|+.++|+|..++   .++|.|++.+|.|++.++||||...  ...|.|+|.|+
T Consensus       492 y~~~V~En~~~Gt~V~~v~A~D~D~g~n~~v~Ysi~~~~---~~~F~Id~~tG~I~~~~~LDrE~~~~~~~~y~l~V~A~  568 (880)
T 1q55_A          492 SRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDP---ARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVT  568 (880)
T ss_dssp             ECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECCCS---SCCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEEE
T ss_pred             eEEEEeCCCCCCCEEEEEEEEeCCCCCCCcEEEEECCCC---CCCEEEeCCccEEEECCccCcccccCCCCEEEEEEEEE
Confidence            999999999999999999999999999999999998643   3599999999999999999999851  13599999999


Q ss_pred             eCCCCCceeEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCce-EEEEEecCcCCCCCcceE
Q psy11097        655 DQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNGA-IVYTLSAPYNQMDLEYFE  733 (817)
Q Consensus       655 D~g~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~-i~Y~l~~~~~~~~~~~F~  733 (817)
                      |+|.|+++++++|+|+|.|+|||+|+|.+.  ...|+|+.++|+ +  |+|+|+|.+.|+. ++|+|..+.    .+.|.
T Consensus       569 D~g~p~~sst~tv~I~V~DvNDn~P~f~~~--~~~v~E~~~~g~-v--v~A~D~D~~~n~~~~~ysl~~~~----~~~f~  639 (880)
T 1q55_A          569 DDGVSVGTGTGTLILHVLDVNDNGPVPSPR--VFTMCDQNPEPQ-V--LTISDADIPPNTYPYKVSLSHGS----DLTWK  639 (880)
T ss_dssp             ECSSSCCCCCEEEECCBCCCCCSCCCBSCC--CEEECSSSCCCE-E--EEBCCSSCTTTTCCCCCBCCSCS----SSSCB
T ss_pred             ECCCCCcEeEEEEEEEEEeCCCCCCCccCc--ceEEecCCCCCe-E--EEEecCCCCCCCceEEEEECCCC----CCCeE
Confidence            999999999999999999999999999854  568999999997 3  9999999999997 899997631    22444


Q ss_pred             EeCCeeEEEEeeeceEEEEEeeCCCCCCcccEEEeCceeEEEEcccCCcccccEEEEEEEEEeCCCCCCCCCCCCCCccc
Q psy11097        734 IQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTKVVFDREKQGAYALEVEARDGAPSARPNSDGEPNSAC  813 (817)
Q Consensus       734 Id~~tG~i~~~~~ld~~y~~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~V~a~D~g~p~~~~~~~~~v~v~  813 (817)
                      | ..                              +..+|.|.+ +.+|||.++.|.|.|.|+|+|.  ++++.+++|+||
T Consensus       640 i-~~------------------------------~g~~~~l~~-~~~d~~~~~~y~l~V~a~D~g~--lsst~tv~V~V~  685 (880)
T 1q55_A          640 A-EL------------------------------DSKGTSMLL-SPTQQLKKGDYSIYVLLSDAQN--NPQLTVVNATVC  685 (880)
T ss_dssp             C-CB------------------------------CTTSSEEEE-BCSSCCCSSCBCCEEECCSSSC--CCEEEECCEEEC
T ss_pred             E-Ec------------------------------ccceeEEEe-ccCccccCCEEEEEEEEEECCc--ceeeEEEEEEEE
Confidence            4 21                              233455554 3558999999999999999888  889999999998


Q ss_pred             cC
Q psy11097        814 TP  815 (817)
Q Consensus       814 ~~  815 (817)
                      .+
T Consensus       686 d~  687 (880)
T 1q55_A          686 SC  687 (880)
T ss_dssp             SC
T ss_pred             ec
Confidence            64
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Back     alignment and structure
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Back     alignment and structure
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Back     alignment and structure
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Back     alignment and structure
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Back     alignment and structure
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Back     alignment and structure
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Back     alignment and structure
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Back     alignment and structure
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Back     alignment and structure
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Back     alignment and structure
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Back     alignment and structure
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Back     alignment and structure
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Back     alignment and structure
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A Back     alignment and structure
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Back     alignment and structure
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Back     alignment and structure
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A Back     alignment and structure
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Back     alignment and structure
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Back     alignment and structure
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Back     alignment and structure
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Back     alignment and structure
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Back     alignment and structure
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A Back     alignment and structure
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Back     alignment and structure
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Back     alignment and structure
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Back     alignment and structure
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Back     alignment and structure
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A Back     alignment and structure
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Back     alignment and structure
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B* Back     alignment and structure
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B* Back     alignment and structure
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Back     alignment and structure
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Back     alignment and structure
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus} Back     alignment and structure
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A Back     alignment and structure
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus} Back     alignment and structure
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A Back     alignment and structure
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Back     alignment and structure
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Back     alignment and structure
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B Back     alignment and structure
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus} Back     alignment and structure
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Back     alignment and structure
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Back     alignment and structure
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus} Back     alignment and structure
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B Back     alignment and structure
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus} Back     alignment and structure
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus} Back     alignment and structure
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A Back     alignment and structure
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A Back     alignment and structure
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1 Back     alignment and structure
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A Back     alignment and structure
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A Back     alignment and structure
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans} Back     alignment and structure
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1 Back     alignment and structure
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 817
d1l3wa4107 b.1.6.1 (A:327-433) C-cadherin ectodomain {African 3e-14
d1l3wa4107 b.1.6.1 (A:327-433) C-cadherin ectodomain {African 1e-08
d1l3wa4107 b.1.6.1 (A:327-433) C-cadherin ectodomain {African 8e-06
d1l3wa4107 b.1.6.1 (A:327-433) C-cadherin ectodomain {African 3e-05
d1l3wa4107 b.1.6.1 (A:327-433) C-cadherin ectodomain {African 5e-04
d1l3wa4107 b.1.6.1 (A:327-433) C-cadherin ectodomain {African 5e-04
d2omzb1104 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human 3e-12
d2omzb1104 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human 5e-05
d2omzb1104 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human 2e-04
d1l3wa1100 b.1.6.1 (A:1-100) C-cadherin ectodomain {African c 6e-12
d1l3wa1100 b.1.6.1 (A:1-100) C-cadherin ectodomain {African c 8e-05
d1l3wa1100 b.1.6.1 (A:1-100) C-cadherin ectodomain {African c 1e-04
d1l3wa1100 b.1.6.1 (A:1-100) C-cadherin ectodomain {African c 0.001
d1l3wa1100 b.1.6.1 (A:1-100) C-cadherin ectodomain {African c 0.002
d1l3wa2113 b.1.6.1 (A:101-213) C-cadherin ectodomain {African 5e-11
d1l3wa2113 b.1.6.1 (A:101-213) C-cadherin ectodomain {African 8e-08
d1l3wa2113 b.1.6.1 (A:101-213) C-cadherin ectodomain {African 7e-04
d1l3wa2113 b.1.6.1 (A:101-213) C-cadherin ectodomain {African 0.002
d1edha2112 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse 7e-11
d1edha2112 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse 9e-06
d1edha2112 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse 0.002
d1edha2112 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse 0.004
d1ncia_102 b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu 1e-10
d1ncia_102 b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu 4e-04
d1ncia_102 b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu 0.001
d1l3wa3113 b.1.6.1 (A:214-326) C-cadherin ectodomain {African 1e-09
d1l3wa3113 b.1.6.1 (A:214-326) C-cadherin ectodomain {African 9e-07
d1l3wa3113 b.1.6.1 (A:214-326) C-cadherin ectodomain {African 2e-05
d1l3wa3113 b.1.6.1 (A:214-326) C-cadherin ectodomain {African 5e-05
d1op4a_136 b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu 3e-09
d1op4a_136 b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu 3e-08
d1op4a_136 b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu 9e-08
d1op4a_136 b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu 6e-04
d1ncja2114 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mu 2e-08
d1ncja2114 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mu 2e-08
d1ncja2114 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mu 2e-05
d1ncja2114 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mu 9e-05
d1ncja2114 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mu 7e-04
d1l3wa5107 b.1.6.1 (A:434-540) C-cadherin ectodomain {African 2e-04
d1l3wa5107 b.1.6.1 (A:434-540) C-cadherin ectodomain {African 2e-04
>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107 Back     information, alignment and structure

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 67.3 bits (163), Expect = 3e-14
 Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 6/111 (5%)

Query: 566 DNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVD 625
           +  P F   +     V E    G  +I + A D DK    ++ Y I   P +     TV+
Sbjct: 1   NEAPFFVP-AVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARW---LTVN 56

Query: 626 EETGEVVTNKVFDREGDDGK--FVSVTIKATDQGEPSLEGVCSFTVEITDV 674
           ++ G V  N   DRE +  K    +V +  TD G     G  +  + + DV
Sbjct: 57  KDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLDV 107
>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107 Back     information, alignment and structure
>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107 Back     information, alignment and structure
>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107 Back     information, alignment and structure
>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107 Back     information, alignment and structure
>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107 Back     information, alignment and structure
>d2omzb1 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d2omzb1 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d2omzb1 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 100 Back     information, alignment and structure
>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 100 Back     information, alignment and structure
>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 100 Back     information, alignment and structure
>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 100 Back     information, alignment and structure
>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 100 Back     information, alignment and structure
>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]} Length = 112 Back     information, alignment and structure
>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]} Length = 112 Back     information, alignment and structure
>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]} Length = 112 Back     information, alignment and structure
>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]} Length = 112 Back     information, alignment and structure
>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 102 Back     information, alignment and structure
>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 102 Back     information, alignment and structure
>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 102 Back     information, alignment and structure
>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 136 Back     information, alignment and structure
>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 136 Back     information, alignment and structure
>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 136 Back     information, alignment and structure
>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 136 Back     information, alignment and structure
>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 114 Back     information, alignment and structure
>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 114 Back     information, alignment and structure
>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 114 Back     information, alignment and structure
>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 114 Back     information, alignment and structure
>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 114 Back     information, alignment and structure
>d1l3wa5 b.1.6.1 (A:434-540) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107 Back     information, alignment and structure
>d1l3wa5 b.1.6.1 (A:434-540) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query817
d1edha2112 E-cadherin (epithelial) {Mouse (Mus musculus) [Tax 99.78
d1l3wa2113 C-cadherin ectodomain {African clawed frog (Xenopu 99.77
d1l3wa2113 C-cadherin ectodomain {African clawed frog (Xenopu 99.77
d1l3wa4107 C-cadherin ectodomain {African clawed frog (Xenopu 99.77
d1edha2112 E-cadherin (epithelial) {Mouse (Mus musculus) [Tax 99.76
d1l3wa4107 C-cadherin ectodomain {African clawed frog (Xenopu 99.74
d1op4a_136 N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 99.72
d1ncja2114 N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 99.72
d1op4a_136 N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 99.72
d1ncja2114 N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 99.7
d1l3wa3113 C-cadherin ectodomain {African clawed frog (Xenopu 99.64
d1l3wa3113 C-cadherin ectodomain {African clawed frog (Xenopu 99.62
d1l3wa5107 C-cadherin ectodomain {African clawed frog (Xenopu 99.56
d1l3wa1100 C-cadherin ectodomain {African clawed frog (Xenopu 99.46
d1l3wa5107 C-cadherin ectodomain {African clawed frog (Xenopu 99.45
d2omzb1104 E-cadherin (epithelial) {Human (Homo sapiens) [Tax 99.45
d1ncia_102 N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 99.44
d1l3wa1100 C-cadherin ectodomain {African clawed frog (Xenopu 99.42
d1ncia_102 N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 99.39
d2omzb1104 E-cadherin (epithelial) {Human (Homo sapiens) [Tax 99.38
d1u2ca1103 Dystroglycan, N-terminal domain {Mouse (Mus muscul 91.42
d1u2ca1103 Dystroglycan, N-terminal domain {Mouse (Mus muscul 87.93
>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: E-cadherin (epithelial)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.78  E-value=5.5e-19  Score=157.44  Aligned_cols=106  Identities=32%  Similarity=0.499  Sum_probs=94.1

Q ss_pred             CCCCCccccCCCceeEEecCCCCCceEEEEEEecCCCC---CCceEEEEEEecCC--CCCccEEEecccceEEe-ccccc
Q psy11097        565 NDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKG---VNGQVKYSIVQQPN--QKGAKFTVDEETGEVVT-NKVFD  638 (817)
Q Consensus       565 NDn~P~f~~~~~~~~~v~En~~~gt~v~~v~A~D~D~g---~n~~v~y~l~~~~~--~~~~~F~Id~~tG~i~~-~~~lD  638 (817)
                      |||+|+|.+ ..|.+.|+|+.++|+.|+++.|+|+|.|   .|+.++|+|..+..  ....+|.|++.+|.|.+ .+.||
T Consensus         1 NDn~P~F~~-~~y~~~V~E~~~~gt~v~~v~A~D~D~g~~~~n~~v~y~i~~~~~~~~~~~~F~i~~~tG~i~~~~~~lD   79 (112)
T d1edha2           1 NDNRPEFTQ-EVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLD   79 (112)
T ss_dssp             SCCCCEESC-SEEEEEEETTCCTTCEEEECCEECCSCTTTCSTTCCEEEEEEEESCCSCSCSEEECTTTCEEEECSSCCC
T ss_pred             CCCCCccCC-CEEEEEEECCCCCCCEEEEEEEEecccCCccccceEEEEEecCCccccceeEEEEecccceEEEEecccc
Confidence            899999998 7899999999999999999999999986   46789999987532  22358999999999986 45799


Q ss_pred             ccCCCCcEEEEEEEEEeCCCCCceeEEEEEEEEEe
Q psy11097        639 REGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITD  673 (817)
Q Consensus       639 ~E~~~~~~~~l~V~a~D~g~p~~s~~~~v~I~V~D  673 (817)
                      ||..  ..|.|+|+|+|+|.|+++++++|.|+|+|
T Consensus        80 ~E~~--~~y~l~V~a~D~g~~~~~~~~~v~I~V~D  112 (112)
T d1edha2          80 RESY--PTYTLVVQAADLQGEGLSTTAKAVITVKD  112 (112)
T ss_dssp             TTTC--CEEEEEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred             cccC--cEEEEEEEEEECCCCccEEEEEEEEEEEC
Confidence            9997  56999999999999999999999999987
>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Back     information, alignment and structure
>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Back     information, alignment and structure
>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Back     information, alignment and structure
>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Back     information, alignment and structure
>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Back     information, alignment and structure
>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Back     information, alignment and structure
>d1l3wa5 b.1.6.1 (A:434-540) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Back     information, alignment and structure
>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Back     information, alignment and structure
>d1l3wa5 b.1.6.1 (A:434-540) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Back     information, alignment and structure
>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Back     information, alignment and structure
>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1u2ca1 b.1.6.2 (A:58-160) Dystroglycan, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1u2ca1 b.1.6.2 (A:58-160) Dystroglycan, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure