Psyllid ID: psy11122

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210--
Protein Sequence
MVCFDELNETLRLFRALKRSVVTQYYATNRSNRRVHPAIVKAEEEMREDGGVEVKVEPGLELPSRKSKRKKVPRLVPDTGRPLTQRNFRFYVGTMCKSLGSPACGQSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPMKITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVMLSLSE
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHcccEEEcccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccEEEEEEEEEccEEEEcccccccccccEEEEEEEccccccccccccEEEEEEEEccccccccEEEEEccccEEEEcEEEEEEEEEEEEEEcccccccEEEEEEEEEccccccccccccccEEEcEEcccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHccccccccccccccccEccccccccccccccccccccccccHcccccccccccEEEEEEEEEEcccccccccccccccccccccccEEEEEEEccccccccHHHHEEEEEEEEccccccccEEEEEcccEEEEEccccEEEEEEEEEEEcccccccEEEEEEEEEccccccccccccccEEEEEEEEcc
Coil and Loop (DISEMBL)
MVCFDELNETLRLFRALKRSVVTQYYAtnrsnrrvhPAIVKAEEEmredggvevkvepglelpsrkskrkkvprlvpdtgrpltqrnFRFYVGTmckslgspacgqsthkwTVYVRncesnpenIVRHIAHVKFMLhesyapnnvvivrkapfkitregwgefpmkitigfvdrennrnvelvhpvnflhvksiipiisletPIDVMLSLSE
Flexible Loop (DISEMBL)
MVCFDELNETLRLFRALKRSVVtqyyatnrsnrrvhpaIVKAEeemredggvevkvepglelpsrkskrkkvprlvpdtgrpltqrnFRFYVGTMCKSLGSPACGQSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFkitregwgefpMKITIGFVDRENNRNVELVHPVnflhvksiipiisletpidvMLSLSE
Low Complexity Region (SEG)
MVCFDELNETLRLFRALKRSVVTQYYATNRSNRRVHPAIVKAEEEMREDGGVEVKVEPGLElpsrkskrkkvprlvpDTGRPLTQRNFRFYVGTMCKSLGSPACGQSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPMKITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVMLSLSE
Disordered region (IsUnstruct)
**CFDELNETLRLFRALKRSVVTQYYATNR****************************************************LTQRNFRFYVGTMCKSLGSPACGQSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPMKITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML****
Disordered Region (DISOPRED)
*VC****NETLRLFRALKRS*****************************************************************RNFRFYVGTMCK*********STHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPMKITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPID*ML****
Disordered Region (DISEMBL)
MVCFDELNETLRLFRALKRSVVTQYYATNRSNRRVHPAIVKAEEEMREDGGVEVKVEPGLELPSRKSKRKKVPRLVPDTGRPLTQRNFRFYVGTMCKSLGSPACGQSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPMKITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVMLSLSE
Disordered Region (DISPRO)
MVCFDELNETLRLFRALKRSVVTQYYAT********************************************PRLVPDTGRPLTQRNFRFYVGTMC***GSPACGQSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPMKITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVMLSLS*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVCFDELNETLRLFRALKRSVVTQYYATNRSNRRVHPAIVKAEEEMREDGGVEVKVEPGLELPSRKSKRKKVPRLVPDTGRPLTQRNFRFYVGTMCKSLGSPACGQSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPMKITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVMLSLSE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	212	2.2.26 [Sep-21-2011]
Q3TUF7	1407	YEATS domain-containing p	yes	N/A	0.476	0.071	0.417	5e-17
Q9ULM3	1422	YEATS domain-containing p	yes	N/A	0.476	0.071	0.417	6e-17
Q755P0	208	Protein AF-9 homolog OS=A	yes	N/A	0.419	0.427	0.395	2e-11
Q6CIV8	220	Protein AF-9 homolog OS=K	yes	N/A	0.476	0.459	0.368	1e-10
Q6FXM4	221	Protein AF-9 homolog OS=C	yes	N/A	0.523	0.502	0.322	4e-10
P53930	226	Protein AF-9 homolog OS=S	yes	N/A	0.419	0.393	0.364	4e-10
Q4WPM8	252	Protein AF-9 homolog OS=N	yes	N/A	0.349	0.293	0.389	5e-09
Q5BC71	275	Protein AF-9 homolog OS=E	yes	N/A	0.349	0.269	0.428	5e-09
P0CM08	392	Protein AF-9 homolog OS=C	yes	N/A	0.452	0.244	0.285	1e-07
P0CM09	392	Protein AF-9 homolog OS=C	N/A	N/A	0.452	0.244	0.285	1e-07

>sp|Q3TUF7|YETS2_MOUSE YEATS domain-containing protein 2 OS=Mus musculus GN=Yeats2 PE=2 SV=2

 Score = 87.8 bits (216), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 2/103 (1%)

Query: 106 QSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
           QSTHKW VYVR     P +I   +  V F LH SY PN++V VR+ PF +TR GWGEFP+
Sbjct: 230 QSTHKWMVYVRGSRREP-SINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPV 288

Query: 166 KITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
           ++ + F D +N R ++++H +      + +  +  ET +DV L
Sbjct: 289 RVQVHFKDSQNKR-IDIIHNLKLDRTYTGLQTLGAETVVDVEL 330

Component of the ATAC complex, a complex with histone acetyltransferase activity on histones H3 and H4.
Mus musculus (taxid: 10090)

>sp|Q9ULM3|YETS2_HUMAN YEATS domain-containing protein 2 OS=Homo sapiens GN=YEATS2 PE=1 SV=2

 Score = 87.4 bits (215), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 2/103 (1%)

Query: 106 QSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
           QSTHKW VYVR     P +I   +  V F LH SY PN++V VR+ PF +TR GWGEFP+
Sbjct: 229 QSTHKWMVYVRGSRREP-SINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPV 287

Query: 166 KITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
           ++ + F D +N R ++++H +      + +  +  ET +DV L
Sbjct: 288 RVQVHFKDSQNKR-IDIIHNLKLDRTYTGLQTLGAETVVDVEL 329

Component of the ATAC complex, a complex with histone acetyltransferase activity on histones H3 and H4.

Homo sapiens (taxid: 9606)

>sp|Q755P0|AF9_ASHGO Protein AF-9 homolog OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=YAF9 PE=3 SV=1

 Score = 69.3 bits (168), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 7/96 (7%)

Query: 93  GTMCKSLGS--PACGQS--THKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIV 148
           G   K +G   PA   S  TH WT++VR  +   E+I   I  V F LHE+Y PN V +V
Sbjct: 21  GNTAKKMGDVRPAIAPSEHTHMWTIFVRGPQG--EDISYFIKKVVFKLHETY-PNPVRVV 77

Query: 149 RKAPFKITREGWGEFPMKITIGFVDRENNRNVELVH 184
              PF++T  GWGEF + + + FVD  N + +   H
Sbjct: 78  DAPPFELTETGWGEFEINVKVHFVDEANEKMLNFYH 113

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

>sp|Q6CIV8|AF9_KLULA Protein AF-9 homolog OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=YAF9 PE=3 SV=1

 Score = 66.6 bits (161), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 57/114 (50%), Gaps = 13/114 (11%)

Query: 93  GTMCKSLGSP----ACGQSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIV 148
           G   K +G      A    TH WT++VR+     E+I   I  V F LHE+Y PN V ++
Sbjct: 22  GNTAKKMGDNIPPNAPKDHTHLWTIFVRDPRG--EDISYFIKKVVFKLHETY-PNPVRVI 78

Query: 149 RKAPFKITREGWGEFPMKITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLET 202
              PF++T  GWGEF + I I F D  N +       +NF H   + P I+ ET
Sbjct: 79  EAPPFELTETGWGEFEINIKIYFADVSNEKM------LNFYHHLRLHPYINPET 126

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

>sp|Q6FXM4|AF9_CANGA Protein AF-9 homolog OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=YAF9 PE=3 SV=1

 Score = 64.7 bits (156), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 13/124 (10%)

Query: 93  GTMCKSLGSP----ACGQSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIV 148
           G   K +G      A  + TH WT++VR+   +  +I   I  V F LHE+Y PN V  +
Sbjct: 21  GNTAKKIGENRPPNAPSEHTHLWTIFVRSPTGD--DISYFIKKVVFKLHETY-PNPVRTI 77

Query: 149 RKAPFKITREGWGEFPMKITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
              PF++T  GWGEF + I I FV+  N +       +NF H   + P +++  P+   +
Sbjct: 78  EAPPFELTETGWGEFDINIKIYFVEESNEKF------INFYHRLRLHPYVNVNPPMSTEV 131

Query: 209 SLSE 212
              E
Sbjct: 132 KKEE 135

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593)

>sp|P53930|AF9_YEAST Protein AF-9 homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YAF9 PE=1 SV=1

 Score = 64.7 bits (156), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 7/96 (7%)

Query: 93  GTMCKSLGS----PACGQSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIV 148
           G   K +GS     A  + TH WT++VR  ++  E+I   I  V F LH++Y PN V  +
Sbjct: 21  GNTAKKMGSVKPPNAPAEHTHLWTIFVRGPQN--EDISYFIKKVVFKLHDTY-PNPVRSI 77

Query: 149 RKAPFKITREGWGEFPMKITIGFVDRENNRNVELVH 184
              PF++T  GWGEF + I + FV+  N + +   H
Sbjct: 78  EAPPFELTETGWGEFDINIKVYFVEEANEKVLNFYH 113

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q4WPM8|AF9_ASPFU Protein AF-9 homolog OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=yaf9 PE=3 SV=2

 Score = 61.2 bits (147), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 3/77 (3%)

Query: 108 THKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPMKI 167
           TH+W V+V+    N E+I   +  V+F LHE+YA  NV  + + PF++T  GWGEF ++I
Sbjct: 42  THQWRVFVKGV--NDEDISYWLKKVQFKLHETYA-QNVRTIEQPPFEVTETGWGEFEIQI 98

Query: 168 TIGFVDRENNRNVELVH 184
            + FV     +   L H
Sbjct: 99  KLYFVPESGEKPQTLWH 115

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

>sp|Q5BC71|AF9_EMENI Protein AF-9 homolog OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=yaf9 PE=3 SV=1

 Score = 61.2 bits (147), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 108 THKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPMKI 167
           TH+W VYVR    N E+I   I  V+F LHE+Y   NV  V   P+++T  GWGEF ++I
Sbjct: 42  THQWRVYVRGV--NGEDISYWIKKVQFKLHETYV-QNVRTVEHPPYEVTETGWGEFEIQI 98

Query: 168 TIGFVDRENNRNVELVH 184
            I FV     +   L H
Sbjct: 99  KIYFVPESMEKPQTLWH 115

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321)

>sp|P0CM08|AF9_CRYNJ Protein AF-9 homolog OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=YAF9 PE=3 SV=1

 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 23/119 (19%)

Query: 103 ACGQSTHKWTVYVRNCESNP-------------------ENIVRHIAHVKFMLHESYAPN 143
           A    THKWTV++ +  S P                   +++   I  V F LHE+YA  
Sbjct: 32  APAGHTHKWTVFLNSAASPPLKQGEPPDYEDIDYLPGGADDLSYFIRKVTFKLHETYATP 91

Query: 144 NVVIVRKAPFKITREGWGEFPMKITIGFVDRENNRNVELVHPVNFLHVKSII---PIIS 199
           N VI  K P++++  GWGEF ++I I  +   + + + L H +   H  + +   P++S
Sbjct: 92  NRVI-DKPPYRVSETGWGEFTVQIRIQLIPESSEKPLGLQHNIKLHHWGAPVEPLPVVS 149

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684)

>sp|P0CM09|AF9_CRYNB Protein AF-9 homolog OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=YAF9 PE=3 SV=1

 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 23/119 (19%)

Query: 103 ACGQSTHKWTVYVRNCESNP-------------------ENIVRHIAHVKFMLHESYAPN 143
           A    THKWTV++ +  S P                   +++   I  V F LHE+YA  
Sbjct: 32  APAGHTHKWTVFLNSAASPPLKQGEPPDYEDIDYLPGGADDLSYFIRKVTFKLHETYATP 91

Query: 144 NVVIVRKAPFKITREGWGEFPMKITIGFVDRENNRNVELVHPVNFLHVKSII---PIIS 199
           N VI  K P++++  GWGEF ++I I  +   + + + L H +   H  + +   P++S
Sbjct: 92  NRVI-DKPPYRVSETGWGEFTVQIRIQLIPESSEKPLGLQHNIKLHHWGAPVEPLPVVS 149

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) (taxid: 283643)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	212
194760683	955	GF14374 [Drosophila ananassae] gi|190616	0.773	0.171	0.344	1e-17
440802144	1027	YEATS family protein [Acanthamoeba caste	0.481	0.099	0.413	2e-16
334324972	1399	PREDICTED: YEATS domain-containing prote	0.698	0.105	0.341	5e-16
291400369	1419	PREDICTED: YEATS domain containing 2 iso	0.698	0.104	0.369	6e-16
291400367	1419	PREDICTED: YEATS domain containing 2 iso	0.698	0.104	0.369	6e-16
326925580	1410	PREDICTED: YEATS domain-containing prote	0.476	0.071	0.427	7e-16
449509424	1393	PREDICTED: YEATS domain-containing prote	0.476	0.072	0.427	8e-16
363736922	1408	PREDICTED: LOW QUALITY PROTEIN: YEATS do	0.476	0.071	0.427	8e-16
39104509	579	mKIAA1197 protein [Mus musculus]	0.476	0.174	0.417	2e-15
405968530	1318	YEATS domain-containing protein 2 [Crass	0.476	0.076	0.427	2e-15

>gi|194760683|ref|XP_001962567.1| GF14374 [Drosophila ananassae] gi|190616264|gb|EDV31788.1| GF14374 [Drosophila ananassae]

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 92/174 (52%), Gaps = 10/174 (5%)

Query: 41  KAEEEMREDGGVEVKVEPGLELPSRKSKRKKVPRLVPDTGRPLTQRNFRFYVGTMCKSLG 100
           K E+ ++E   V VK+E      SR++  ++   L  +  R   +  F F VG   K +G
Sbjct: 203 KEEQPVQEVPAVSVKLEDEAPCTSRQALERQ---LELNASRLNNKNKFNFVVGNTSKYIG 259

Query: 101 SPACGQST------HKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFK 154
               G+ST      +KW VYV+  +  P+ +  +I  V+F LH SY PNN+V V   PF+
Sbjct: 260 DDMRGESTGSQALVYKWLVYVQG-KDLPQPLEAYIKKVRFQLHHSYRPNNIVDVHDPPFQ 318

Query: 155 ITREGWGEFPMKITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
           I+R GWGEFPM+I + F D  + + V+LVH V        +  +  ET +++ L
Sbjct: 319 ISRRGWGEFPMRIQLFFQDHLHQKPVQLVHNVVLDKTMCGMHTMGAETIVEIWL 372

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|440802144|gb|ELR23083.1| YEATS family protein [Acanthamoeba castellanii str. Neff]

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)

Query: 106 QSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
           +STHKW VYVR     P +I   +   +F LH S+APN+VV V   PF +TR GWGEFP+
Sbjct: 597 RSTHKWMVYVRGPAEEP-DISHFVKKARFFLHPSFAPNDVVEVLHPPFHLTRRGWGEFPV 655

Query: 166 KITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVMLS 209
           ++ + FVD   N+ V+++H +      S + ++  ETP++V L+
Sbjct: 656 RVQLHFVD-TRNKPVDIIHHLKLDQTHSGLQMLGGETPVEVELN 698

Source: Acanthamoeba castellanii str. Neff

Species: Acanthamoeba castellanii

Genus: Acanthamoeba

Superkingdom: Eukaryota

>gi|334324972|ref|XP_001366314.2| PREDICTED: YEATS domain-containing protein 2 isoform 1 [Monodelphis domestica]

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 7/155 (4%)

Query: 57  EPGLELPSRKSKRKKVPRLVPDTGRPLTQRNFRFYVGTMCKSL---GSPACGQSTHKWTV 113
           +PG    SRK+ ++       D  R   ++     VG + K +         QSTHKW V
Sbjct: 181 DPGSGASSRKANQQNSDLTSEDVSRLFVKKTI--VVGNVSKYIPPDKREENDQSTHKWMV 238

Query: 114 YVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPMKITIGFVD 173
           YVR     P +I   +  V F LH SY PN++V VR+ PF +TR GWGEFP+++ + F D
Sbjct: 239 YVRGSRREP-SINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPVRVQVHFKD 297

Query: 174 RENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
            +N R ++++H +      + +  +  ET +DV L
Sbjct: 298 NQNKR-IDIIHNLKLDRTYTGLQTLGAETVVDVEL 331

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|291400369|ref|XP_002716538.1| PREDICTED: YEATS domain containing 2 isoform 2 [Oryctolagus cuniculus]

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 58/157 (36%), Positives = 82/157 (52%), Gaps = 9/157 (5%)

Query: 58  PGLELPSRKSKRKKVPRLVPDTGRPLTQRNF---RFYVGTMCKSL---GSPACGQSTHKW 111
           PG ++ S  S  K  PR    TG   T R F      VG + K +         QSTHKW
Sbjct: 177 PGRDMSSVLSSHKTDPRNADLTGDE-TSRLFVKKTIVVGNVSKYIPPDKREENDQSTHKW 235

Query: 112 TVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPMKITIGF 171
            VYVR     P +I   +  V F LH SY PN++V VR+ PF +TR GWGEFP+++ + F
Sbjct: 236 MVYVRGSRREP-SINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPVRVQVHF 294

Query: 172 VDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
            D +N R ++++H +      + +  +  ET +DV L
Sbjct: 295 KDSQNKR-IDIIHNLKLDRTYTGLQTLGAETVVDVEL 330

Source: Oryctolagus cuniculus

Species: Oryctolagus cuniculus

Genus: Oryctolagus

Family: Leporidae

Order: Lagomorpha

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|291400367|ref|XP_002716537.1| PREDICTED: YEATS domain containing 2 isoform 1 [Oryctolagus cuniculus]

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 58/157 (36%), Positives = 82/157 (52%), Gaps = 9/157 (5%)

Query: 58  PGLELPSRKSKRKKVPRLVPDTGRPLTQRNF---RFYVGTMCKSL---GSPACGQSTHKW 111
           PG ++ S  S  K  PR    TG   T R F      VG + K +         QSTHKW
Sbjct: 177 PGRDMSSVLSSHKTDPRNADLTGDE-TSRLFVKKTIVVGNVSKYIPPDKREENDQSTHKW 235

Query: 112 TVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPMKITIGF 171
            VYVR     P +I   +  V F LH SY PN++V VR+ PF +TR GWGEFP+++ + F
Sbjct: 236 MVYVRGSRREP-SINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPVRVQVHF 294

Query: 172 VDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
            D +N R ++++H +      + +  +  ET +DV L
Sbjct: 295 KDSQNKR-IDIIHNLKLDRTYTGLQTLGAETVVDVEL 330

Source: Oryctolagus cuniculus

Species: Oryctolagus cuniculus

Genus: Oryctolagus

Family: Leporidae

Order: Lagomorpha

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326925580|ref|XP_003208990.1| PREDICTED: YEATS domain-containing protein 2-like [Meleagris gallopavo]

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 2/103 (1%)

Query: 106 QSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
           QSTHKW VYVR     P +I   +  V F LH SY PN++V VR+ PF +TR GWGEFP+
Sbjct: 244 QSTHKWMVYVRGSRREP-SINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPV 302

Query: 166 KITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
           ++ I F D +N R ++++H +      + +  +  ET +DV L
Sbjct: 303 RVQIHFKDSQNKR-IDIIHNLKLDRTYTGLQTLGAETVVDVEL 344

Source: Meleagris gallopavo

Species: Meleagris gallopavo

Genus: Meleagris

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|449509424|ref|XP_002189789.2| PREDICTED: YEATS domain-containing protein 2 [Taeniopygia guttata]

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 2/103 (1%)

Query: 106 QSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
           QSTHKW VYVR     P +I   +  V F LH SY PN++V VR+ PF +TR GWGEFP+
Sbjct: 229 QSTHKWMVYVRGSRREP-SINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPV 287

Query: 166 KITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
           ++ I F D +N R ++++H +      + +  +  ET +DV L
Sbjct: 288 RVQIHFKDSQNKR-IDIIHNLKLDRTYTGLQTLGAETVVDVEL 329

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|363736922|ref|XP_003641772.1| PREDICTED: LOW QUALITY PROTEIN: YEATS domain-containing protein 2 [Gallus gallus]

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 2/103 (1%)

Query: 106 QSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
           QSTHKW VYVR     P +I   +  V F LH SY PN++V VR+ PF +TR GWGEFP+
Sbjct: 237 QSTHKWMVYVRGSRREP-SINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPV 295

Query: 166 KITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
           ++ I F D +N R ++++H +      + +  +  ET +DV L
Sbjct: 296 RVQIHFKDSQNKR-IDIIHNLKLDRTYTGLQTLGAETVVDVEL 337

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|39104509|dbj|BAC65745.3| mKIAA1197 protein [Mus musculus]

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 2/103 (1%)

Query: 106 QSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
           QSTHKW VYVR     P +I   +  V F LH SY PN++V VR+ PF +TR GWGEFP+
Sbjct: 259 QSTHKWMVYVRGSRREP-SINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPV 317

Query: 166 KITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
           ++ + F D +N R ++++H +      + +  +  ET +DV L
Sbjct: 318 RVQVHFKDSQNKR-IDIIHNLKVDRTYTGLQTLGAETVVDVEL 359

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|405968530|gb|EKC33594.1| YEATS domain-containing protein 2 [Crassostrea gigas]

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 2/103 (1%)

Query: 106 QSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
           QSTHKW VYVR  +  P N+   +  V F LH SY PN++V V +APF +TR GWGEFP+
Sbjct: 253 QSTHKWMVYVRGPKGEP-NVDHFVKKVWFFLHPSYRPNDLVEVSQAPFHLTRRGWGEFPV 311

Query: 166 KITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
           ++ + F D   N+ V+++H +      + +  +  ET IDV L
Sbjct: 312 RVQLYFKD-SRNKKVDVIHQLKLDRTYTGLQTLGSETLIDVEL 353

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	212
ZFIN|ZDB-GENE-081104-292	1417	si:ch73-60l17.1 "si:ch73-60l17	0.476	0.071	0.417	4.7e-19
UNIPROTKB|E1BW02	1265	YEATS2 "Uncharacterized protei	0.476	0.079	0.427	2.4e-18
UNIPROTKB|E1BW01	1421	YEATS2 "Uncharacterized protei	0.476	0.071	0.427	3.2e-18
UNIPROTKB|E1C1B7	1425	YEATS2 "Uncharacterized protei	0.476	0.070	0.427	3.3e-18
RGD|1566176	1303	Yeats2 "YEATS domain containin	0.476	0.077	0.417	3.3e-18
MGI|MGI:2447762	1407	Yeats2 "YEATS domain containin	0.476	0.071	0.417	4e-18
UNIPROTKB|J9NTU6	1410	YEATS2 "Uncharacterized protei	0.476	0.071	0.417	4e-18
UNIPROTKB|A7Z088	1412	YEATS2 "YEATS2 protein" [Bos t	0.476	0.071	0.417	4e-18
UNIPROTKB|F6UZ61	1415	YEATS2 "Uncharacterized protei	0.476	0.071	0.417	4.1e-18
UNIPROTKB|Q9ULM3	1422	YEATS2 "YEATS domain-containin	0.476	0.071	0.417	4.1e-18

ZFIN|ZDB-GENE-081104-292 si:ch73-60l17.1 "si:ch73-60l17.1" [Danio rerio (taxid:7955)]

 Score = 222 (83.2 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
 Identities = 43/103 (41%), Positives = 62/103 (60%)

Query:   106 QSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
             QSTHKW VYVR     P +I   +  V F LH SY PN++V V + PF +TR GWGEFP+
Sbjct:   226 QSTHKWMVYVRGSRKEP-SIDHFVKKVWFFLHPSYKPNDLVEVSEPPFHLTRRGWGEFPV 284

Query:   166 KITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
             ++ I F D+ N R ++++H +      + +  +  ET +DV L
Sbjct:   285 RVQIHFKDQRNKR-IDIIHHLKLDRTYTGLQTLGAETVVDVQL 326

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|E1BW02 YEATS2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 225 (84.3 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
 Identities = 44/103 (42%), Positives = 63/103 (61%)

Query:   106 QSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
             QSTHKW VYVR     P +I   +  V F LH SY PN++V VR+ PF +TR GWGEFP+
Sbjct:   229 QSTHKWMVYVRGSRREP-SINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPV 287

Query:   166 KITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
             ++ I F D +N R ++++H +      + +  +  ET +DV L
Sbjct:   288 RVQIHFKDSQNKR-IDIIHNLKLDRTYTGLQTLGAETVVDVEL 329

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|E1BW01 YEATS2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 225 (84.3 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
 Identities = 44/103 (42%), Positives = 63/103 (61%)

Query:   106 QSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
             QSTHKW VYVR     P +I   +  V F LH SY PN++V VR+ PF +TR GWGEFP+
Sbjct:   229 QSTHKWMVYVRGSRREP-SINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPV 287

Query:   166 KITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
             ++ I F D +N R ++++H +      + +  +  ET +DV L
Sbjct:   288 RVQIHFKDSQNKR-IDIIHNLKLDRTYTGLQTLGAETVVDVEL 329

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|E1C1B7 YEATS2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 225 (84.3 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
 Identities = 44/103 (42%), Positives = 63/103 (61%)

Query:   106 QSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
             QSTHKW VYVR     P +I   +  V F LH SY PN++V VR+ PF +TR GWGEFP+
Sbjct:   229 QSTHKWMVYVRGSRREP-SINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPV 287

Query:   166 KITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
             ++ I F D +N R ++++H +      + +  +  ET +DV L
Sbjct:   288 RVQIHFKDSQNKR-IDIIHNLKLDRTYTGLQTLGAETVVDVEL 329

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA

GO:0017025 "TBP-class protein binding" evidence=IEA

GO:0043966 "histone H3 acetylation" evidence=IEA

GO:0072686 "mitotic spindle" evidence=IEA

RGD|1566176 Yeats2 "YEATS domain containing 2" [Rattus norvegicus (taxid:10116)]

 Score = 224 (83.9 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
 Identities = 43/103 (41%), Positives = 63/103 (61%)

Query:   106 QSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
             QSTHKW VYVR     P +I   +  V F LH SY PN++V VR+ PF +TR GWGEFP+
Sbjct:   230 QSTHKWMVYVRGSRREP-SINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPV 288

Query:   166 KITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
             ++ + F D +N R ++++H +      + +  +  ET +DV L
Sbjct:   289 RVQVHFKDSQNKR-IDIIHNLKLDRTYTGLQTLGAETVVDVEL 330

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex" evidence=ISO

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0017025 "TBP-class protein binding" evidence=ISO

GO:0043966 "histone H3 acetylation" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO

GO:0072686 "mitotic spindle" evidence=ISO

MGI|MGI:2447762 Yeats2 "YEATS domain containing 2" [Mus musculus (taxid:10090)]

 Score = 224 (83.9 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
 Identities = 43/103 (41%), Positives = 63/103 (61%)

Query:   106 QSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
             QSTHKW VYVR     P +I   +  V F LH SY PN++V VR+ PF +TR GWGEFP+
Sbjct:   230 QSTHKWMVYVRGSRREP-SINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPV 288

Query:   166 KITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
             ++ + F D +N R ++++H +      + +  +  ET +DV L
Sbjct:   289 RVQVHFKDSQNKR-IDIIHNLKLDRTYTGLQTLGAETVVDVEL 330

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0005634 "nucleus" evidence=IDA

GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex" evidence=ISO;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0017025 "TBP-class protein binding" evidence=ISO

GO:0043966 "histone H3 acetylation" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO

GO:0072686 "mitotic spindle" evidence=IDA

UNIPROTKB|J9NTU6 YEATS2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 224 (83.9 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
 Identities = 43/103 (41%), Positives = 63/103 (61%)

Query:   106 QSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
             QSTHKW VYVR     P +I   +  V F LH SY PN++V VR+ PF +TR GWGEFP+
Sbjct:   230 QSTHKWMVYVRGSRREP-SINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPV 288

Query:   166 KITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
             ++ + F D +N R ++++H +      + +  +  ET +DV L
Sbjct:   289 RVQVHFKDSQNKR-IDIIHNLKLDRTYTGLQTLGAETVVDVEL 330

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|A7Z088 YEATS2 "YEATS2 protein" [Bos taurus (taxid:9913)]

 Score = 224 (83.9 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
 Identities = 43/103 (41%), Positives = 63/103 (61%)

Query:   106 QSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
             QSTHKW VYVR     P +I   +  V F LH SY PN++V VR+ PF +TR GWGEFP+
Sbjct:   230 QSTHKWMVYVRGSRREP-SINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPV 288

Query:   166 KITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
             ++ + F D +N R ++++H +      + +  +  ET +DV L
Sbjct:   289 RVQVHFKDSQNKR-IDIIHNLKLDRTYTGLQTLGAETVVDVEL 330

GO:0072686 "mitotic spindle" evidence=IEA

GO:0043966 "histone H3 acetylation" evidence=IEA

GO:0017025 "TBP-class protein binding" evidence=IEA

GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

UNIPROTKB|F6UZ61 YEATS2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 224 (83.9 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
 Identities = 43/103 (41%), Positives = 63/103 (61%)

Query:   106 QSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
             QSTHKW VYVR     P +I   +  V F LH SY PN++V VR+ PF +TR GWGEFP+
Sbjct:   230 QSTHKWMVYVRGSRREP-SINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPV 288

Query:   166 KITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
             ++ + F D +N R ++++H +      + +  +  ET +DV L
Sbjct:   289 RVQVHFKDSQNKR-IDIIHNLKLDRTYTGLQTLGAETVVDVEL 330

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q9ULM3 YEATS2 "YEATS domain-containing protein 2" [Homo sapiens (taxid:9606)]

 Score = 224 (83.9 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
 Identities = 43/103 (41%), Positives = 63/103 (61%)

Query:   106 QSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
             QSTHKW VYVR     P +I   +  V F LH SY PN++V VR+ PF +TR GWGEFP+
Sbjct:   229 QSTHKWMVYVRGSRREP-SINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPV 287

Query:   166 KITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
             ++ + F D +N R ++++H +      + +  +  ET +DV L
Sbjct:   288 RVQVHFKDSQNKR-IDIIHNLKLDRTYTGLQTLGAETVVDVEL 329

GO:0072686 "mitotic spindle" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0017025 "TBP-class protein binding" evidence=IPI

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0043966 "histone H3 acetylation" evidence=IDA

GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	212
pfam03366	84	pfam03366, YEATS, YEATS family	3e-22
COG5033	225	COG5033, TFG3, Transcription initiation factor IIF	4e-10

>gnl|CDD|190614 pfam03366, YEATS, YEATS family

 Score = 86.1 bits (214), Expect = 3e-22
 Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 7/83 (8%)

Query: 108 THKWTVYVR--NCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
           THKWTV+VR  + E +    ++    V F LHES+ PN V  V K PF++T  GWGEF +
Sbjct: 1   THKWTVFVRGLDNEGDLSYFIKK---VTFKLHESF-PNPVRTVTKPPFEVTETGWGEFEI 56

Query: 166 KITIGFVDRENNRNVELVHPVNF 188
            I I FVD  N + V + H +  
Sbjct: 57  PIKIYFVD-SNEKPVTIQHDLKL 78

We have named this family the YEATS family, after `YNK7', `ENL', `AF-9', and `TFIIF small subunit'. This family also contains the GAS41 protein. All these proteins are thought to have a transcription stimulatory activity. Length = 84

>gnl|CDD|227366 COG5033, TFG3, Transcription initiation factor IIF, auxiliary subunit [Transcription]

 Score = 57.1 bits (138), Expect = 4e-10
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 3/77 (3%)

Query: 108 THKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPMKI 167
           TH W V+VR      E+I   +  V F LH ++  N    +   PF+I   GWGEF ++I
Sbjct: 35  THIWLVFVRA--PGKEDIATIVKKVIFKLHPTF-SNPTRTIESPPFEIKETGWGEFDIQI 91

Query: 168 TIGFVDRENNRNVELVH 184
            I F ++   + +    
Sbjct: 92  KIFFAEKAGEKTIHFYL 108

Length = 225

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	212
PF03366	84	YEATS: YEATS family; InterPro: IPR005033 Named the	100.0
KOG3149|consensus	249		99.96
COG5033	225	TFG3 Transcription initiation factor IIF, auxiliar	99.94

>PF03366 YEATS: YEATS family; InterPro: IPR005033 Named the YEATS family, after `YNK7', `ENL', `AF-9', and `TFIIF small subunit', this family also contains the GAS41 protein

Probab=100.00  E-value=9e-34  Score=213.71  Aligned_cols=82  Identities=41%  Similarity=0.779  Sum_probs=67.4

Q ss_pred             ceeEEEEEECCCCCCccccCeeeeEEEEeCCCCCCCCeEEEecCCeEEEeeeEeeEeEEEEEEEecCCCCceeEEEEEEE
Q psy11122        108 THKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPMKITIGFVDRENNRNVELVHPVN  187 (212)
Q Consensus       108 tH~WtVyVR~~~~~~d~ls~~I~KV~F~LHpTF~pnp~rvV~~PPFeVtE~GWGEF~I~I~I~Fk~~~~~p~v~i~H~L~  187 (212)
                      ||+|+||||+.+++ | ++.+|+||+|+|||||+ ||+|++++|||+|+|+|||||+|.|+|+|++.++.++++|.|+|+
T Consensus         1 th~W~v~Vr~~~~~-d-~~~~i~kV~f~LHpsF~-~p~r~v~~pPFevte~GWGeF~i~I~i~f~~~~~~~~~~~~h~L~   77 (84)
T PF03366_consen    1 THKWTVYVRGLDNE-D-LSYFIKKVTFKLHPSFP-NPVRVVTKPPFEVTETGWGEFEIPIKIHFKDPSNEKPVTIQHDLK   77 (84)
T ss_dssp             -EEEEEEEEECCCT----TTTEEEEEEES-TTSS-S-EEECSSTTEEEEEEESS--EEEEEEECCCGGCTCEEEEEEE--
T ss_pred             CcEEEEEEEeCCCC-C-ccceEEEEEEECCCCCC-CCceEecCCCCEEEEeEeccEEEEEEEEEeCCCCCCcEEEEEEEE
Confidence            79999999999875 5 99999999999999995 899999999999999999999999999999975445599999999


Q ss_pred             eCCCC
Q psy11122        188 FLHVK  192 (212)
Q Consensus       188 l~~~~  192 (212)
                      |+++.
T Consensus        78 l~~~~   82 (84)
T PF03366_consen   78 LHQDG   82 (84)
T ss_dssp             SSSCE
T ss_pred             cCCCC
Confidence            99864

All these proteins are thought to have a transcription stimulatory activity.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3QRL_A 2L7E_A 3FK3_C 3RLS_A.

>KOG3149|consensus

Probab=99.96  E-value=4.5e-29  Score=220.14  Aligned_cols=107  Identities=35%  Similarity=0.569  Sum_probs=99.4

Q ss_pred             CceEEeEEEEccceEEcCCCCCCCCceeEEEEEECCCCCCccccCeeeeEEEEeCCCCCCCCeEEEecCCeEEEeeeEee
Q psy11122         83 LTQRNFRFYVGTMCKSLGSPACGQSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGE  162 (212)
Q Consensus        83 ~~~~~k~IviGn~a~~l~~~~~~~~tH~WtVyVR~~~~~~d~ls~~I~KV~F~LHpTF~pnp~rvV~~PPFeVtE~GWGE  162 (212)
                      +.++.++|++||.|++++++.++.+||.|+||||+..+ .| ++.||+||+|+||+|| +||+|+|++|||+|+|+||||
T Consensus        11 ~~~~~~~iv~G~~a~~~~~~~~~~~th~w~v~v~~~~~-ed-~~~~V~KV~f~LH~sf-~~P~Rvv~~pPf~i~EtGwge   87 (249)
T KOG3149|consen   11 ECTISVPIVPGNRAAILGKRLPDGFTHIWEVYVRGPGK-ED-ISAFVDKVVFKLHESF-PNPRRVVESPPFEITETGWGE   87 (249)
T ss_pred             eeeEEeeeecCccccccCCCCCcccceeeEEEecCcCc-cc-cceeeeeeeeeccccc-ccccccccCCCceEEeecccc
Confidence            55678999999999999998888999999999999975 34 9999999999999999 599999999999999999999


Q ss_pred             EeEEEEEEEecCCCCceeEEEEEEEeCCCC
Q psy11122        163 FPMKITIGFVDRENNRNVELVHPVNFLHVK  192 (212)
Q Consensus       163 F~I~I~I~Fk~~~~~p~v~i~H~L~l~~~~  192 (212)
                      |+|.|+|+|.+..+++++.+.|.|.++..+
T Consensus        88 F~i~i~i~f~d~~~~~~v~~~~~l~l~~~~  117 (249)
T KOG3149|consen   88 FEIQIEIFFTDDANEKKVTLYHDLKLHSYG  117 (249)
T ss_pred             ceEEEEEEeccCCCCceeeeeeeEEeeccC
Confidence            999999999988888889999999999764

>COG5033 TFG3 Transcription initiation factor IIF, auxiliary subunit [Transcription]

Probab=99.94  E-value=8.4e-27  Score=201.70  Aligned_cols=101  Identities=28%  Similarity=0.491  Sum_probs=88.0

Q ss_pred             EeEEEEccceEEcCCC--CCCCCceeEEEEEECCCCCCccccCeeeeEEEEeCCCCCCCCeEEEecCCeEEEeeeEeeEe
Q psy11122         87 NFRFYVGTMCKSLGSP--ACGQSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFP  164 (212)
Q Consensus        87 ~k~IviGn~a~~l~~~--~~~~~tH~WtVyVR~~~~~~d~ls~~I~KV~F~LHpTF~pnp~rvV~~PPFeVtE~GWGEF~  164 (212)
                      .+.|+.| +|..++.+  .+-.+||-|.+||++..+ .+ +++||+||+|+||||| +||.|++++|||+|.|+|||||+
T Consensus        13 ~r~Iipg-ea~~~~~e~~~P~r~th~w~v~v~~~g~-E~-~~~iv~KVifkLH~Tf-~NP~Rti~~pPFeI~EtGWGEF~   88 (225)
T COG5033          13 QRVIIPG-EAKPLGNEERFPVRHTHIWLVFVRAPGK-ED-IATIVKKVIFKLHPTF-SNPTRTIESPPFEIKETGWGEFD   88 (225)
T ss_pred             eceeccC-ccccCCccccCCchhhEEEEEEEeCCCC-cc-hhhhhheeeEEecccc-CCCcccccCCCcEEEecccccce
Confidence            4556666 99999985  566799999999999865 34 8999999999999999 59999999999999999999999


Q ss_pred             EEEEEEEecCCCCceeEEEEEEEeCCCCC
Q psy11122        165 MKITIGFVDRENNRNVELVHPVNFLHVKS  193 (212)
Q Consensus       165 I~I~I~Fk~~~~~p~v~i~H~L~l~~~~~  193 (212)
                      |.|+|+|.+..++  .++.|+|.|.+...
T Consensus        89 i~I~iff~~~age--~~~~fyl~f~~~~Y  115 (225)
T COG5033          89 IQIKIFFAEKAGE--KTIHFYLHFGDEPY  115 (225)
T ss_pred             EEEEEEEecCCCc--eEeehhhhcccccc
Confidence            9999999999997  58888888877543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	212
3rls_A	175	Crystal Structure Of Yeast Af-9 Homolog Protein Yaf		5e-11
3fk3_A	164	Structure Of The Yeats Domain, Yaf9 Length = 164		1e-10

>pdb|3RLS|A Chain A, Crystal Structure Of Yeast Af-9 Homolog Protein Yaf9 Length = 175

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 93  GTMCKSLGS----PACGQSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIV 148
           G   K +GS     A  + TH WT++VR  ++  E+I   I  V F LH++Y PN V  +
Sbjct: 13  GNTAKKMGSVKPPNAPAEHTHLWTIFVRGPQN--EDISYFIKKVVFKLHDTY-PNPVRSI 69
Query: 149 RKAPFKITREGWGEFPMKITIGFVDRENNRNVELVH 184
              PF++T  GWGEF + I + FV+  N + +   H
Sbjct: 70  EAPPFELTETGWGEFDINIKVYFVEEANEKVLNFYH 105

>pdb|3FK3|A Chain A, Structure Of The Yeats Domain, Yaf9 Length = 164

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 93  GTMCKSLGS----PACGQSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIV 148
           G   K  GS     A  + TH WT++VR  ++  E+I   I  V F LH++Y PN V  +
Sbjct: 16  GNTAKKXGSVKPPNAPAEHTHLWTIFVRGPQN--EDISYFIKKVVFKLHDTY-PNPVRSI 72
Query: 149 RKAPFKITREGWGEFPMKITIGFVDRENNRNVELVH 184
              PF++T  GWGEF + I + FV+  N + +   H
Sbjct: 73  EAPPFELTETGWGEFDINIKVYFVEEANEKVLNFYH 108

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	212
3rls_A	175	YAF9, protein AF-9 homolog; yeats domain, histone,	2e-20
3qrl_A	140	Transcription initiation factor TFIID subunit 14;	4e-19

>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A Length = 175

 Score = 83.3 bits (205), Expect = 2e-20
 Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 7/128 (5%)

Query: 89  RFYVGTMCKSLGSP----ACGQSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNN 144
               G   K +GS     A  + TH WT++VR      E+I   I  V F LH++Y PN 
Sbjct: 9   PIIYGNTAKKMGSVKPPNAPAEHTHLWTIFVRG--PQNEDISYFIKKVVFKLHDTY-PNP 65

Query: 145 VVIVRKAPFKITREGWGEFPMKITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPI 204
           V  +   PF++T  GWGEF + I + FV+  N + +   H +      + +P        
Sbjct: 66  VRSIEAPPFELTETGWGEFDINIKVYFVEEANEKVLNFYHRLRLHPYANPVPNSDNGNEQ 125

Query: 205 DVMLSLSE 212
           +     S+
Sbjct: 126 NTTDHNSK 133

>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A Length = 140

 Score = 79.2 bits (195), Expect = 4e-19
 Identities = 22/126 (17%), Positives = 47/126 (37%), Gaps = 7/126 (5%)

Query: 89  RFYVGTMCKSLG--SPACGQSTHKWTVYVRNCESNPENIVRH-IAHVKFMLHESYAPNNV 145
              + T    L    P       +W++ +   +   + I       V + LH ++  N  
Sbjct: 11  TIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTF-ANPN 69

Query: 146 VIVRKAPFKITREGWGEFPMKITIGFVDRENNRNVELVHPVNF-LHVKSIIPIISLETPI 204
                 PF+I  +GWG FP+ I++  ++       ++ H +NF      +  +I +    
Sbjct: 70  RTFTDPPFRIEEQGWGGFPLDISVFLLE--KAGERKIPHDLNFLQESYEVEHVIQIPLNK 127

Query: 205 DVMLSL 210
            ++   
Sbjct: 128 PLLTEE 133

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	212
3rls_A	175	YAF9, protein AF-9 homolog; yeats domain, histone,	100.0
3qrl_A	140	Transcription initiation factor TFIID subunit 14;	99.96

>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A

Probab=100.00  E-value=4.1e-38  Score=264.23  Aligned_cols=108  Identities=31%  Similarity=0.604  Sum_probs=97.0

Q ss_pred             CCceEEeEEEEccceEEcCCC----CCCCCceeEEEEEECCCCCCccccCeeeeEEEEeCCCCCCCCeEEEecCCeEEEe
Q psy11122         82 PLTQRNFRFYVGTMCKSLGSP----ACGQSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITR  157 (212)
Q Consensus        82 p~~~~~k~IviGn~a~~l~~~----~~~~~tH~WtVyVR~~~~~~d~ls~~I~KV~F~LHpTF~pnp~rvV~~PPFeVtE  157 (212)
                      .+.+++|+|||||+|++|+++    .++++||+|+||||+.+++ | |++||+||+|+||||| +||+|++++|||+|+|
T Consensus         2 k~v~i~kpIv~Gn~a~~l~~~~~~~~~~~~TH~WtVyVr~~~~e-d-is~~v~KV~F~LHpSF-~np~Rvv~~PPFevtE   78 (175)
T 3rls_A            2 KTLSVSRPIIYGNTAKKMGSVKPPNAPAEHTHLWTIFVRGPQNE-D-ISYFIKKVVFKLHDTY-PNPVRSIEAPPFELTE   78 (175)
T ss_dssp             CCCCEEEEEEEEEEEEECCSCCCTTCCTTCCEEEEEEEECGGGC-C-CTTTEEEEEEECCTTS-SSCEEEECSSSEEEEE
T ss_pred             CceEEEeCEEEcceeEECCccccCCCCCCCcEEEEEEEECCCCC-C-hhheEEEEEEEcCCCC-CCCcEEEeCCCCEEEE
Confidence            356789999999999999974    4578999999999998753 4 9999999999999999 5999999999999999


Q ss_pred             eeEeeEeEEEEEEEecCCCCceeEEEEEEEeCCCC
Q psy11122        158 EGWGEFPMKITIGFVDRENNRNVELVHPVNFLHVK  192 (212)
Q Consensus       158 ~GWGEF~I~I~I~Fk~~~~~p~v~i~H~L~l~~~~  192 (212)
                      +|||||+|.|+|||++.+++++++|.|+|+|++..
T Consensus        79 ~GWGeF~i~I~i~F~~~~~ek~i~i~H~L~L~~~~  113 (175)
T 3rls_A           79 TGWGEFDINIKVYFVEEANEKVLNFYHRLRLHPYA  113 (175)
T ss_dssp             EESSCCEEEEEEEECGGGCCCCEEEEEECCCCC--
T ss_pred             eEEeeEEEEEEEEEeCCCCCccEEEEEEEEecCCC
Confidence            99999999999999998766669999999999864

>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A

Probab=99.96  E-value=1.7e-30  Score=211.48  Aligned_cols=104  Identities=23%  Similarity=0.474  Sum_probs=86.6

Q ss_pred             CceEEeEEEEccceEEcCCC--CCCCCceeEE--EEEECCCCCCccccCeeeeEEEEeCCCCCCCCeEEEecCCeEEEee
Q psy11122         83 LTQRNFRFYVGTMCKSLGSP--ACGQSTHKWT--VYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITRE  158 (212)
Q Consensus        83 ~~~~~k~IviGn~a~~l~~~--~~~~~tH~Wt--VyVR~~~~~~d~ls~~I~KV~F~LHpTF~pnp~rvV~~PPFeVtE~  158 (212)
                      ...|..+|+.+..  .++.+  .++.++|+|+  ||||+.+++ +..++||+||+|+|||||+ ||+|++++|||+|+|+
T Consensus         7 ~vkrtvr~~T~Q~--~~~~~~~~eg~~~h~WtieV~vr~~~g~-ei~~~~i~kV~f~LH~sF~-np~r~v~~pPF~v~e~   82 (140)
T 3qrl_A            7 TVKRTIRIKTQQH--ILPEVPPVENFPVRQWSIEIVLLDDEGK-EIPATIFDKVIYHLHPTFA-NPNRTFTDPPFRIEEQ   82 (140)
T ss_dssp             EEEEEEEEEEEEE--ECTTSCCBTTBCCEEEEEEEEEECTTSC-EECCTTEEEEEEECCTTSS-SCEEEECSTTCCEEEE
T ss_pred             ceEEEEEEEEeee--eCCCCCCCCCCcccEeeEEEEEeCCCCC-cCchheEEEEEEEeCCCCC-CCeEEEcCCCcEEEEE
Confidence            3345556666655  67664  4567889999  999999875 3134899999999999995 9999999999999999


Q ss_pred             eEeeEeEEEEEEEecCCCCceeEEEEEEEeCCCC
Q psy11122        159 GWGEFPMKITIGFVDRENNRNVELVHPVNFLHVK  192 (212)
Q Consensus       159 GWGEF~I~I~I~Fk~~~~~p~v~i~H~L~l~~~~  192 (212)
                      |||||+|.|+|||++.++ + ++|.|+|+|++..
T Consensus        83 GWGeF~i~I~i~f~~~~~-~-~~i~H~L~f~~~~  114 (140)
T 3qrl_A           83 GWGGFPLDISVFLLEKAG-E-RKIPHDLNFLQES  114 (140)
T ss_dssp             ESSCCCEEEEEEEGGGTE-E-EEEEECCCSSSSE
T ss_pred             EeeeEEEEEEEEEecCCC-c-EEEEEEEEeCCCC
Confidence            999999999999999864 3 8999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00