Psyllid ID: psy11169


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60------
MEYGFSKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDLITEFVDHF
ccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHcc
ccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHccccccccHEEHEHccc
meygfskgqtkICKGWTEIMPHVTKAAYLAANTcttlfqdrrwncsslfltpkltpdLITEFVDHF
meygfskgqtkickGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSlfltpkltpdliTEFVDHF
MEYGFSKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDLITEFVDHF
********QTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDLITEFV***
*EYGFSKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDLITEFVDHF
********QTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDLITEFVDHF
**YGFSKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDLITEFVDHF
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEYGFSKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDLITEFVDHF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query66 2.2.26 [Sep-21-2011]
Q66II0 353 Protein Wnt-11b-1 OS=Xeno yes N/A 0.833 0.155 0.454 2e-06
Q28J82 353 Protein Wnt-11b-2 OS=Xeno yes N/A 0.833 0.155 0.454 2e-06
O73864 354 Protein Wnt-11 OS=Danio r yes N/A 0.833 0.155 0.418 5e-06
P49893 353 Protein Wnt-11b OS=Xenopu N/A N/A 0.833 0.155 0.418 3e-05
P47793 352 Protein Wnt-4a OS=Danio r no N/A 0.742 0.139 0.428 4e-05
Q670P5 352 Protein Wnt-11 OS=Xenopus N/A N/A 0.833 0.156 0.381 7e-05
B2GUT4 352 Protein Wnt-11 OS=Xenopus no N/A 0.833 0.156 0.381 0.0001
P51891 354 Protein Wnt-11 OS=Coturni N/A N/A 0.833 0.155 0.381 0.0001
P49339 354 Protein Wnt-11 OS=Gallus yes N/A 0.833 0.155 0.381 0.0001
P28466 1004 Protein Wnt-5 OS=Drosophi yes N/A 0.666 0.043 0.409 0.0001
>sp|Q66II0|W11B1_XENTR Protein Wnt-11b-1 OS=Xenopus tropicalis GN=wnt11b-1 PE=2 SV=1 Back     alignment and function desciption
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/55 (45%), Positives = 30/55 (54%)

Query: 4   GFSKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDL 58
           G    Q+++CK   E+M  V  AA  A  TC   F D RWNCSS+   P  TPDL
Sbjct: 48  GLVPEQSQLCKRNLELMQSVVNAAKQAKLTCQMTFSDMRWNCSSVENAPNFTPDL 102




Ligand for the frizzled7 transmembrane receptor. Primarily acts via non-canonical Wnt pathways mediated by either Ca(2+) and PKC, or by JNK and dvl2/dsh. Depending on the cellular context, can also signal via the canonical Wnt pathway mediated by beta-catenin and dvl2/dsh. May also inhibit canonical Wnt signaling. Maternally initiates dorsal/ventral axis formation by a canonical route, which signals via lrp6. In a complex with wnt5a, activates the canonical and non-canonical processes involved in axis formation. In the non-canonical pathway, acts through fzd7/fz7 to induce phosphorylation of dvl2/dsh. Signals through a non-canonical Wnt pathway to regulate convergent extension movements during gastrulation. Interactions with the secreted Wnt antagonist sfrp5 to coordinate foregut development, acting via a non-canonical wnt pathway whereby sfrp5 restricts wnt11b activity to prevent inappropriate foregut formation. Mediates cardiogenesis via non-canonical Wnt signaling involving JNK-activation and PKC. Acts redundantly with wnt11/wnt11r during pronephros induction.
Xenopus tropicalis (taxid: 8364)
>sp|Q28J82|W11B2_XENTR Protein Wnt-11b-2 OS=Xenopus tropicalis GN=wnt11b-2 PE=2 SV=1 Back     alignment and function description
>sp|O73864|WNT11_DANRE Protein Wnt-11 OS=Danio rerio GN=wnt11 PE=2 SV=1 Back     alignment and function description
>sp|P49893|WN11B_XENLA Protein Wnt-11b OS=Xenopus laevis GN=wnt11b PE=1 SV=2 Back     alignment and function description
>sp|P47793|WNT4A_DANRE Protein Wnt-4a OS=Danio rerio GN=wnt4a PE=2 SV=1 Back     alignment and function description
>sp|Q670P5|WNT11_XENLA Protein Wnt-11 OS=Xenopus laevis GN=wnt11 PE=2 SV=1 Back     alignment and function description
>sp|B2GUT4|WNT11_XENTR Protein Wnt-11 OS=Xenopus tropicalis GN=wnt11 PE=2 SV=1 Back     alignment and function description
>sp|P51891|WNT11_COTJA Protein Wnt-11 OS=Coturnix coturnix japonica GN=WNT11 PE=2 SV=1 Back     alignment and function description
>sp|P49339|WNT11_CHICK Protein Wnt-11 OS=Gallus gallus GN=WNT11 PE=2 SV=1 Back     alignment and function description
>sp|P28466|WNT5_DROME Protein Wnt-5 OS=Drosophila melanogaster GN=Wnt5 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query66
270008220 378 hypothetical protein TcasGA2_TC014270 [T 0.848 0.148 0.625 2e-13
328716060106 PREDICTED: protein Wnt-11b-1-like [Acyrt 0.863 0.537 0.491 7e-11
91082825 303 PREDICTED: similar to Wnt11 protein [Tri 0.621 0.135 0.707 2e-09
313759708 303 Wnt11_2 [Parasteatoda tepidariorum] 0.833 0.181 0.5 2e-07
241999090 358 AmphiWnt4, putative [Ixodes scapularis] 0.848 0.156 0.428 7e-07
294716485 390 WNT11 [Perionyx excavatus] 0.833 0.141 0.472 1e-06
335632008 427 WNT-11 [Trichinella spiralis] 0.848 0.131 0.428 1e-06
339246861 638 protein Wnt-11 [Trichinella spiralis] gi 0.848 0.087 0.428 2e-06
405969448 305 Protein Wnt-11 [Crassostrea gigas] 0.757 0.163 0.54 2e-06
269785075 358 wingless-type MMTV integration site fami 0.833 0.153 0.454 7e-06
>gi|270008220|gb|EFA04668.1| hypothetical protein TcasGA2_TC014270 [Tribolium castaneum] Back     alignment and taxonomy information
 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/56 (62%), Positives = 42/56 (75%)

Query: 3   YGFSKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDL 58
           YG +K Q K+C+   E MPHV KAA LAA+TC T+F+DRRWNCSS+   P LTPDL
Sbjct: 62  YGLAKLQAKLCRSTMEAMPHVQKAAVLAADTCQTVFKDRRWNCSSITTAPYLTPDL 117




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328716060|ref|XP_003245823.1| PREDICTED: protein Wnt-11b-1-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|91082825|ref|XP_969261.1| PREDICTED: similar to Wnt11 protein [Tribolium castaneum] Back     alignment and taxonomy information
>gi|313759708|gb|ADR79166.1| Wnt11_2 [Parasteatoda tepidariorum] Back     alignment and taxonomy information
>gi|241999090|ref|XP_002434188.1| AmphiWnt4, putative [Ixodes scapularis] gi|215495947|gb|EEC05588.1| AmphiWnt4, putative [Ixodes scapularis] Back     alignment and taxonomy information
>gi|294716485|gb|ADF31344.1| WNT11 [Perionyx excavatus] Back     alignment and taxonomy information
>gi|335632008|gb|AEH58044.1| WNT-11 [Trichinella spiralis] Back     alignment and taxonomy information
>gi|339246861|ref|XP_003375064.1| protein Wnt-11 [Trichinella spiralis] gi|316971651|gb|EFV55399.1| protein Wnt-11 [Trichinella spiralis] Back     alignment and taxonomy information
>gi|405969448|gb|EKC34419.1| Protein Wnt-11 [Crassostrea gigas] Back     alignment and taxonomy information
>gi|269785075|ref|NP_001161493.1| wingless-type MMTV integration site family, member 11 precursor [Saccoglossus kowalevskii] gi|268054401|gb|ACY92687.1| Wnt11 [Saccoglossus kowalevskii] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query66
UNIPROTKB|Q28J82 353 wnt11b-2 "Protein Wnt-11b-2" [ 0.833 0.155 0.454 8.1e-07
UNIPROTKB|Q66II0 353 wnt11b-1 "Protein Wnt-11b-1" [ 0.833 0.155 0.454 8.1e-07
ZFIN|ZDB-GENE-990603-12 354 wnt11 "wingless-type MMTV inte 0.833 0.155 0.418 1.7e-06
UNIPROTKB|P49893 353 wnt11b "Protein Wnt-11b" [Xeno 0.833 0.155 0.418 7.7e-06
UNIPROTKB|H0Y663150 WNT4 "Protein Wnt" [Homo sapie 0.742 0.326 0.408 1.9e-05
UNIPROTKB|Q670P5 352 wnt11 "Protein Wnt-11" [Xenopu 0.833 0.156 0.381 2.7e-05
UNIPROTKB|P49339 354 WNT11 "Protein Wnt-11" [Gallus 0.833 0.155 0.381 2.7e-05
UNIPROTKB|P51891 354 WNT11 "Protein Wnt-11" [Coturn 0.833 0.155 0.381 2.7e-05
UNIPROTKB|B2GUT4 352 wnt11 "Protein Wnt-11" [Xenopu 0.833 0.156 0.381 3.5e-05
ZFIN|ZDB-GENE-980526-352 352 wnt4a "wingless-type MMTV inte 0.742 0.139 0.428 3.5e-05
UNIPROTKB|Q28J82 wnt11b-2 "Protein Wnt-11b-2" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms
 Score = 120 (47.3 bits), Expect = 8.1e-07, P = 8.1e-07
 Identities = 25/55 (45%), Positives = 30/55 (54%)

Query:     4 GFSKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDL 58
             G    Q+++CK   E+M  V  AA  A  TC   F D RWNCSS+   P  TPDL
Sbjct:    48 GLVPEQSQLCKRNLELMQSVVNAAKQAKLTCQMTFSDMRWNCSSVENAPNFTPDL 102




GO:0005576 "extracellular region" evidence=ISS
UNIPROTKB|Q66II0 wnt11b-1 "Protein Wnt-11b-1" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-990603-12 wnt11 "wingless-type MMTV integration site family, member 11" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P49893 wnt11b "Protein Wnt-11b" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|H0Y663 WNT4 "Protein Wnt" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q670P5 wnt11 "Protein Wnt-11" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|P49339 WNT11 "Protein Wnt-11" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P51891 WNT11 "Protein Wnt-11" [Coturnix japonica (taxid:93934)] Back     alignment and assigned GO terms
UNIPROTKB|B2GUT4 wnt11 "Protein Wnt-11" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-980526-352 wnt4a "wingless-type MMTV integration site family, member 4a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query66
pfam00110 308 pfam00110, wnt, wnt family 2e-10
smart00097 305 smart00097, WNT1, found in Wnt-1 2e-06
>gnl|CDD|215724 pfam00110, wnt, wnt family Back     alignment and domain information
 Score = 53.8 bits (130), Expect = 2e-10
 Identities = 18/55 (32%), Positives = 29/55 (52%)

Query: 4  GFSKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDL 58
          G S+ Q ++C+   ++M  V + A L    C   F++RRWNCS+L  +      L
Sbjct: 7  GLSRKQRRLCRRNPDVMASVGEGARLGIEECQHQFRNRRWNCSTLDSSSVFGKIL 61


Wnt genes have been identified in vertebrates and invertebrates but not in plants, unicellular eukaryotes or prokaryotes. In humans, 19 WNT proteins are known. Because of their insolubility little is known about Wnt protein structure, but all have 23 or 24 Cys residues whose spacing is highly conserved. Signal transduction by Wnt proteins (including the Wnt/beta-catenin, the Wnt/Ca++, and the Wnt/polarity pathway) is mediated by receptors of the Frizzled and LDL-receptor-related protein (LRP) families. Length = 308

>gnl|CDD|128408 smart00097, WNT1, found in Wnt-1 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 66
KOG3913|consensus 356 99.92
PF00110 310 wnt: wnt family; InterPro: IPR005817 Wnt proteins 99.91
smart00097 305 WNT1 found in Wnt-1. 99.91
PLN02277 730 H(+) -translocating inorganic pyrophosphatase 84.01
TIGR01104 697 V_PPase vacuolar-type H(+)-translocating pyrophosp 83.58
PRK00733 666 hppA membrane-bound proton-translocating pyrophosp 80.81
>KOG3913|consensus Back     alignment and domain information
Probab=99.92  E-value=6.4e-26  Score=156.04  Aligned_cols=65  Identities=31%  Similarity=0.518  Sum_probs=62.0

Q ss_pred             CCCCCcHHHHhHhhcccchHHHHHHHHHHHHHHHHHhhCcCCCCCCCCCCCCCcccccccccccC
Q psy11169          1 MEYGFSKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDLITEFVDH   65 (66)
Q Consensus         1 ~~~~l~~~Q~~lC~~~~~~~~~v~~G~~~a~~eCq~qF~~~RWNCs~~~~~~~~~~~l~~g~kE~   65 (66)
                      +++||+++|+++|++||++|++|.+|+++||+|||+||+++|||||+.+..+.|+++|+.|+||+
T Consensus        50 ~l~gL~~~Q~~~Cr~~p~~~~sv~~G~~~~i~ECq~QFr~~RWNCs~~~~~~~~g~~l~~g~REs  114 (356)
T KOG3913|consen   50 NLPGLSPRQRRLCRRNPDVMPSVAEGAREGIQECQFQFRFRRWNCSTLDQLPVFGPLLSRGTRET  114 (356)
T ss_pred             hccccCHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccccchhhcccchHH
Confidence            47899999999999999999999999999999999999999999999876779999999999996



>PF00110 wnt: wnt family; InterPro: IPR005817 Wnt proteins constitute a large family of secreted molecules that are involved in intercellular signalling during development Back     alignment and domain information
>smart00097 WNT1 found in Wnt-1 Back     alignment and domain information
>PLN02277 H(+) -translocating inorganic pyrophosphatase Back     alignment and domain information
>TIGR01104 V_PPase vacuolar-type H(+)-translocating pyrophosphatase Back     alignment and domain information
>PRK00733 hppA membrane-bound proton-translocating pyrophosphatase; Validated Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query66
4f0a_B 316 Protein WNT-8, XWNT-8; WNT signaling, ligand-recep 3e-07
>4f0a_B Protein WNT-8, XWNT-8; WNT signaling, ligand-receptor complex, frizzled, fatty acylation, glycosylation, signaling protein; HET: NAG BMA MAN FUC PAM; 3.25A {Xenopus laevis} Length = 316 Back     alignment and structure
 Score = 44.2 bits (103), Expect = 3e-07
 Identities = 11/53 (20%), Positives = 13/53 (24%)

Query: 6  SKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDL 58
          +       K +      V   A      C   F   RWNC    L       L
Sbjct: 5  NNFLMTGPKAYLTYSASVAVGAQNGIEECKYQFAWERWNCPESTLQLATHNGL 57


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query66
4f0a_B 316 Protein WNT-8, XWNT-8; WNT signaling, ligand-recep 99.74
>4f0a_B Protein WNT-8, XWNT-8; WNT signaling, ligand-receptor complex, frizzled, fatty acylation, glycosylation, signaling protein; HET: NAG BMA MAN FUC PAM; 3.25A {Xenopus laevis} Back     alignment and structure
Probab=99.74  E-value=4.6e-19  Score=120.02  Aligned_cols=56  Identities=18%  Similarity=0.223  Sum_probs=42.6

Q ss_pred             HHhHhhc----ccchHHHHHHHHHHHHHHHHHhhCcCCCCCCCCCCCCCccc-ccccccccC
Q psy11169          9 QTKICKG----WTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTP-DLITEFVDH   65 (66)
Q Consensus         9 Q~~lC~~----~~~~~~~v~~G~~~a~~eCq~qF~~~RWNCs~~~~~~~~~~-~l~~g~kE~   65 (66)
                      |..||..    +|++|++|.+|+++||+|||+||+++|||||... .+.|++ +|.+|+||+
T Consensus         4 ~~~~~~~~~~~~~~~~~~v~~Ga~~~i~ECq~QFr~~RWNCs~~~-~~~~~~~~l~~g~REt   64 (316)
T 4f0a_B            4 VNNFLMTGPKAYLTYSASVAVGAQNGIEECKYQFAWERWNCPEST-LQLATHNGLRSATRET   64 (316)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSCCCCCT-THHHHCTTCCSCCHHH
T ss_pred             HHHHHHhCCccChHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCc-cccCCcccccCCCHHH
Confidence            4556644    5679999999999999999999999999999643 334565 689999996




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00