Psyllid ID: psy11234

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------10
Protein Sequence
MGLGTCRLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAYKAVCDLETFSVLTSLHALAFCSIRGILNSLKTTPM
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHcHHcHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccEEEEcccccc
Coil and Loop (DISEMBL)
MGLGTCRLLTFCYLAVFNVWLLLCpahlshdwqfgsiplvtslgdvrnfATCLLFVSCFCVAYKAVCDLETFSVLTSLHALAFCSIRGILnslkttpm
Flexible Loop (DISEMBL)
MGLGTCRLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAYKAVCDLETFSVLTSLHALAFCSIRgilnslkttpm
Low Complexity Region (SEG)
MGLGTCRLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAYKAVCDLETFSVLTSLHALAFCSIRGILNSLKTTPM
Disordered region (IsUnstruct)
***GTCRLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAYKAVCDLETFSVLTSLHALAFCSIRGILNS******
Disordered Region (DISOPRED)
**LGTCRLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAYKAVCDLETFSVLTSLHALAFCSIRGILNS******
Disordered Region (DISEMBL)
MGLGTCRLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAYKAVCDLETFSVLTSLHALAFCSIRGILNSLKTTPM
Disordered Region (DISPRO)
*GLGTCRLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAYKAVCDLETFSVLTSLHALAFCSIRGILNSLK****
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGLGTCRLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAYKAVCDLETFSVLTSLHALAFCSIRGILNSLKTTPM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	98	2.2.26 [Sep-21-2011]
Q8IUR5	882	Transmembrane and TPR rep	no	N/A	0.765	0.085	0.5	3e-12
Q3UV71	942	Transmembrane and TPR rep	yes	N/A	0.765	0.079	0.536	6e-12
Q6ZXV5	915	Transmembrane and TPR rep	no	N/A	0.520	0.055	0.547	7e-09
Q8BRH0	920	Transmembrane and TPR rep	no	N/A	0.520	0.055	0.547	1e-08
Q6DCD5	836	Transmembrane and TPR rep	N/A	N/A	0.612	0.071	0.4	4e-08
Q56A06	836	Transmembrane and TPR rep	no	N/A	0.591	0.069	0.431	4e-07
Q9V3X5	938	Transmembrane and TPR rep	yes	N/A	0.581	0.060	0.491	3e-06
Q8N394	836	Transmembrane and TPR rep	no	N/A	0.520	0.061	0.450	4e-06
Q8BG19	741	Transmembrane and TPR rep	no	N/A	0.673	0.089	0.363	9e-06
Q9VF81	705	Transmembrane and TPR rep	no	N/A	0.418	0.058	0.487	0.0003

>sp|Q8IUR5|TMTC1_HUMAN Transmembrane and TPR repeat-containing protein 1 OS=Homo sapiens GN=TMTC1 PE=1 SV=3

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/82 (50%), Positives = 47/82 (57%), Gaps = 7/82 (8%)

Query: 7   RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFV-----SCFCV 61
           R LT+ YL  FNVWLLL P  L +DWQ GSIPLV ++ D+RN AT  L V     S  C+
Sbjct: 313 RFLTYSYLLAFNVWLLLAPVTLCYDWQVGSIPLVETIWDMRNLATIFLAVVMALLSLHCL 372

Query: 62  AYKAVCDLETFSVLTSLHALAF 83
           A  A   LE   VL  L  L F
Sbjct: 373 A--AFKRLEHKEVLVGLLFLVF 392

Homo sapiens (taxid: 9606)

>sp|Q3UV71|TMTC1_MOUSE Transmembrane and TPR repeat-containing protein 1 OS=Mus musculus GN=Tmtc1 PE=2 SV=2

 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/82 (53%), Positives = 48/82 (58%), Gaps = 7/82 (8%)

Query: 7   RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFV-----SCFCV 61
           R LT+ YL  FNVWLLL P  L +DWQ GSIPLV ++ DVRN AT LL V     S  CV
Sbjct: 373 RFLTYSYLLAFNVWLLLAPITLCYDWQVGSIPLVETIWDVRNLATILLAVVMALLSLHCV 432

Query: 62  AYKAVCDLETFSVLTSLHALAF 83
           A  A   LE   VL  L  L F
Sbjct: 433 A--AFKRLEHKEVLAGLLFLVF 452

Mus musculus (taxid: 10090)

>sp|Q6ZXV5|TMTC3_HUMAN Transmembrane and TPR repeat-containing protein 3 OS=Homo sapiens GN=TMTC3 PE=1 SV=2

 Score = 59.3 bits (142), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/53 (54%), Positives = 33/53 (62%), Gaps = 2/53 (3%)

Query: 7   RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCF 59
           R LTF YL   N WLLL P+ L  DW  G+IPL+ SL D+RN AT   F  CF
Sbjct: 279 RQLTFNYLLPVNAWLLLNPSELCCDWTMGTIPLIESLLDIRNLATFTFF--CF 329

Homo sapiens (taxid: 9606)

>sp|Q8BRH0|TMTC3_MOUSE Transmembrane and TPR repeat-containing protein 3 OS=Mus musculus GN=Tmtc3 PE=2 SV=2

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/53 (54%), Positives = 32/53 (60%), Gaps = 2/53 (3%)

Query: 7   RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCF 59
           R LTF YL   N WLLL P+ L  DW  G+IPL+ S  DVRN AT   F  CF
Sbjct: 284 RQLTFNYLLPVNAWLLLNPSELCCDWTMGTIPLIESFLDVRNLATFAFF--CF 334

Mus musculus (taxid: 10090)

>sp|Q6DCD5|TMTC2_XENLA Transmembrane and TPR repeat-containing protein 2 OS=Xenopus laevis GN=tmtc2 PE=2 SV=1

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 35/60 (58%)

Query: 7   RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAYKAV 66
           R LTF YL   N+WLL CP  LS DW   ++PL+ ++ D RN  T   ++    +AY ++
Sbjct: 269 RTLTFFYLPTKNLWLLFCPDTLSFDWSMDAVPLIKTITDWRNIHTVAFYILLILLAYSSL 328

Xenopus laevis (taxid: 8355)

>sp|Q56A06|TMTC2_MOUSE Transmembrane and TPR repeat-containing protein 2 OS=Mus musculus GN=Tmtc2 PE=2 SV=1

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 33/58 (56%)

Query: 6   CRLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAY 63
            R LTF YL   N+WLLLCP  LS DW   ++PL+ ++ D RN  T   +     +AY
Sbjct: 268 ARTLTFLYLPTKNLWLLLCPDTLSFDWSMDAVPLLKTVCDWRNLHTVAFYSGLLLLAY 325

Mus musculus (taxid: 10090)

>sp|Q9V3X5|TMTC2_DROME Transmembrane and TPR repeat-containing protein CG4341 OS=Drosophila melanogaster GN=CG4341 PE=2 SV=1

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 34/57 (59%)

Query: 7   RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAY 63
           RLLTF YL VFN+ LLL P  LS DW   ++P VTSL D RN  +   +     VA+
Sbjct: 291 RLLTFLYLPVFNLRLLLQPNVLSFDWGMDALPRVTSLWDRRNAQSACFYSVLVGVAW 347

Drosophila melanogaster (taxid: 7227)

>sp|Q8N394|TMTC2_HUMAN Transmembrane and TPR repeat-containing protein 2 OS=Homo sapiens GN=TMTC2 PE=2 SV=1

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 30/51 (58%)

Query: 6   CRLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFV 56
            R LTF YL   N+WLLLCP  LS DW   ++PL+ ++ D RN  T   + 
Sbjct: 268 TRTLTFFYLPTKNLWLLLCPDTLSFDWSMDAVPLLKTVCDWRNLHTVAFYT 318

Homo sapiens (taxid: 9606)

>sp|Q8BG19|TMTC4_MOUSE Transmembrane and TPR repeat-containing protein 4 OS=Mus musculus GN=Tmtc4 PE=2 SV=1

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%)

Query: 6   CRLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAYKA 65
            R + + Y    N WLLLCP  L  DW  G IPL+ S+GD R  A   L++    + ++A
Sbjct: 313 VRAINYNYYYSLNAWLLLCPWWLCFDWSMGCIPLIKSVGDWRVIALAALWLCLIGLIFQA 372

Query: 66  VCDLET 71
           +C  ++
Sbjct: 373 LCSEDS 378

Mus musculus (taxid: 10090)

>sp|Q9VF81|TMTC4_DROME Transmembrane and TPR repeat-containing protein CG5038 OS=Drosophila melanogaster GN=CG5038 PE=1 SV=1

 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/41 (48%), Positives = 28/41 (68%)

Query: 7   RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVR 47
           R L+  YL V N+WL+LCP  L +DW  G + LVT++ D+R
Sbjct: 279 RGLSQQYLLVMNIWLMLCPHWLCYDWALGCVKLVTNIWDLR 319

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	98
340729314	752	PREDICTED: transmembrane and TPR repeat-	0.663	0.086	0.676	4e-18
383859965	466	PREDICTED: transmembrane and TPR repeat-	0.663	0.139	0.676	4e-18
350417169	252	PREDICTED: transmembrane and TPR repeat-	0.653	0.253	0.687	7e-18
380023966	668	PREDICTED: transmembrane and TPR repeat-	0.663	0.097	0.646	3e-17
328779044	366	PREDICTED: transmembrane and TPR repeat-	0.663	0.177	0.646	5e-17
270001551	743	hypothetical protein TcasGA2_TC000396 [T	0.663	0.087	0.630	3e-16
189234732	684	PREDICTED: similar to smile protein [Tri	0.663	0.095	0.615	1e-15
170052202	364	smile protein [Culex quinquefasciatus] g	0.663	0.178	0.615	2e-15
157106988	267	hypothetical protein AaeL_AAEL004681 [Ae	0.663	0.243	0.6	3e-15
170061138	185	conserved hypothetical protein [Culex qu	0.653	0.345	0.625	5e-15

>gi|340729314|ref|XP_003402949.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like [Bombus terrestris]

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 44/65 (67%), Positives = 46/65 (70%)

Query: 7   RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAYKAV 66
           RLLTFCYLA  N WLLLCPA LSHDWQ GS+PLV SL D RN ATCL F  C  + YKA 
Sbjct: 292 RLLTFCYLAALNCWLLLCPATLSHDWQMGSVPLVASLADTRNLATCLFFGGCLILTYKAF 351

Query: 67  CDLET 71
            D E 
Sbjct: 352 TDFEQ 356

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859965|ref|XP_003705462.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like [Megachile rotundata]

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 44/65 (67%), Positives = 46/65 (70%)

Query: 7   RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAYKAV 66
           RLLTFCYLA  N WLLLCPA LSHDWQ GS+PLV SL D RN ATCL F  C  + YKA 
Sbjct: 110 RLLTFCYLAALNCWLLLCPATLSHDWQMGSVPLVASLADTRNLATCLFFGGCLILTYKAF 169

Query: 67  CDLET 71
            D E 
Sbjct: 170 TDFEQ 174

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350417169|ref|XP_003491290.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like [Bombus impatiens]

 Score = 94.7 bits (234), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 46/64 (71%)

Query: 7   RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAYKAV 66
           RLLTFCYLA  N WLLLCPA LSHDWQ GS+PLV SL D RN ATCL F  C  + YKA 
Sbjct: 183 RLLTFCYLAALNCWLLLCPAMLSHDWQMGSVPLVASLADTRNLATCLFFGGCLILTYKAF 242

Query: 67  CDLE 70
            D E
Sbjct: 243 TDFE 246

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380023966|ref|XP_003695780.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like [Apis florea]

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/65 (64%), Positives = 45/65 (69%)

Query: 7   RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAYKAV 66
           R LTFCYLA  + WLLLCPA LSHDWQ GS+PLV SL D RN ATCL F  C  + YKA 
Sbjct: 206 RFLTFCYLAALHCWLLLCPATLSHDWQMGSVPLVASLADTRNLATCLFFGGCLILTYKAF 265

Query: 67  CDLET 71
            D E 
Sbjct: 266 TDFEQ 270

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328779044|ref|XP_001120547.2| PREDICTED: transmembrane and TPR repeat-containing protein 1-like [Apis mellifera]

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 42/65 (64%), Positives = 45/65 (69%)

Query: 7   RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAYKAV 66
           R LTFCYLA  + WLLLCPA LSHDWQ GS+PLV SL D RN ATCL F  C  + YKA 
Sbjct: 120 RFLTFCYLAALHCWLLLCPATLSHDWQMGSVPLVASLADTRNLATCLFFGGCLILTYKAF 179

Query: 67  CDLET 71
            D E 
Sbjct: 180 TDFEQ 184

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270001551|gb|EEZ97998.1| hypothetical protein TcasGA2_TC000396 [Tribolium castaneum]

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/65 (63%), Positives = 46/65 (70%)

Query: 7   RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAYKAV 66
           R+LTFCYLA FN WLLLCPA LSHDWQ GSIPLVTSL D RN  TC  F     +  +++
Sbjct: 278 RVLTFCYLAAFNWWLLLCPATLSHDWQMGSIPLVTSLSDSRNLMTCFFFGVAALLVIRSL 337

Query: 67  CDLET 71
           CD E 
Sbjct: 338 CDFEN 342

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189234732|ref|XP_973900.2| PREDICTED: similar to smile protein [Tribolium castaneum]

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/65 (61%), Positives = 46/65 (70%)

Query: 7   RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAYKAV 66
           ++LTFCYLA FN WLLLCPA LSHDWQ GSIPLVTSL D RN  TC  F     +  +++
Sbjct: 219 KVLTFCYLAAFNWWLLLCPATLSHDWQMGSIPLVTSLSDSRNLMTCFFFGVAALLVIRSL 278

Query: 67  CDLET 71
           CD E 
Sbjct: 279 CDFEN 283

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170052202|ref|XP_001862114.1| smile protein [Culex quinquefasciatus] gi|167873139|gb|EDS36522.1| smile protein [Culex quinquefasciatus]

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/65 (61%), Positives = 45/65 (69%)

Query: 6   CRLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAYKA 65
            RLLTFCYLA FN WLLLCPA LSHDWQ GSIPLVTS+ D RN  T + F +     Y+ 
Sbjct: 118 VRLLTFCYLAAFNWWLLLCPATLSHDWQMGSIPLVTSISDPRNLLTFIAFFAALLFVYRG 177

Query: 66  VCDLE 70
           + D E
Sbjct: 178 LLDCE 182

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157106988|ref|XP_001649575.1| hypothetical protein AaeL_AAEL004681 [Aedes aegypti] gi|108879711|gb|EAT43936.1| AAEL004681-PA, partial [Aedes aegypti]

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 39/65 (60%), Positives = 45/65 (69%)

Query: 6   CRLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAYKA 65
            RLLTFCYLA FN WLLLCP+ LSHDWQ GSIPLVTS+ D RN  T + F +     Y+ 
Sbjct: 203 VRLLTFCYLAAFNWWLLLCPSTLSHDWQMGSIPLVTSISDPRNLLTFIAFFAALLFVYRG 262

Query: 66  VCDLE 70
           + D E
Sbjct: 263 MMDFE 267

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170061138|ref|XP_001866106.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167879357|gb|EDS42740.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 45/64 (70%)

Query: 7   RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAYKAV 66
           RLLTFCYLA FN WLLLCPA LSHDWQ GSIPLVTS+ D RN  T + F +     Y+ +
Sbjct: 121 RLLTFCYLAAFNWWLLLCPATLSHDWQMGSIPLVTSISDPRNLLTFIAFFAALLFVYRGL 180

Query: 67  CDLE 70
            D E
Sbjct: 181 LDCE 184

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	98
RGD|1564868	905	Tmtc1 "transmembrane and tetra	0.765	0.082	0.536	6.9e-12
MGI|MGI:3039590	942	Tmtc1 "transmembrane and tetra	0.765	0.079	0.536	7.3e-12
UNIPROTKB|F1N5E9	939	TMTC1 "Uncharacterized protein	0.765	0.079	0.512	3.2e-11
UNIPROTKB|Q8IUR5	882	TMTC1 "Transmembrane and TPR r	0.765	0.085	0.5	6.1e-11
UNIPROTKB|F1NNA8	945	Gga.1615 "Uncharacterized prot	0.755	0.078	0.493	1.1e-10
UNIPROTKB|F1NPM4	814	TMTC2 "Uncharacterized protein	0.581	0.070	0.438	2e-08
UNIPROTKB|I3LN91	288	TMTC2 "Uncharacterized protein	0.581	0.197	0.438	2.5e-08
UNIPROTKB|E1C3P5	921	TMTC3 "Uncharacterized protein	0.520	0.055	0.584	3e-08
UNIPROTKB|F1SPX9	650	TMTC3 "Uncharacterized protein	0.520	0.078	0.547	4e-08
UNIPROTKB|F1MG00	646	TMTC2 "Uncharacterized protein	0.581	0.088	0.438	5.1e-08

RGD|1564868 Tmtc1 "transmembrane and tetratricopeptide repeat containing 1" [Rattus norvegicus (taxid:10116)]

 Score = 173 (66.0 bits), Expect = 6.9e-12, P = 6.9e-12
 Identities = 44/82 (53%), Positives = 48/82 (58%)

Query:     7 RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFV-----SCFCV 61
             R LT+ YL  FNVWLLL P  L +DWQ GSIPLV ++ DVRN AT LL V     S  CV
Sbjct:   374 RFLTYSYLLAFNVWLLLAPITLCYDWQVGSIPLVETIWDVRNLATILLAVVMALLSLHCV 433

Query:    62 AYKAVCDLETFSVLTSLHALAF 83
             A  A   LE   VL  L  L F
Sbjct:   434 A--AFKRLEHKEVLAGLLFLVF 453

GO:0005739 "mitochondrion" evidence=ISO

MGI|MGI:3039590 Tmtc1 "transmembrane and tetratricopeptide repeat containing 1" [Mus musculus (taxid:10090)]

 Score = 173 (66.0 bits), Expect = 7.3e-12, P = 7.3e-12
 Identities = 44/82 (53%), Positives = 48/82 (58%)

Query:     7 RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFV-----SCFCV 61
             R LT+ YL  FNVWLLL P  L +DWQ GSIPLV ++ DVRN AT LL V     S  CV
Sbjct:   373 RFLTYSYLLAFNVWLLLAPITLCYDWQVGSIPLVETIWDVRNLATILLAVVMALLSLHCV 432

Query:    62 AYKAVCDLETFSVLTSLHALAF 83
             A  A   LE   VL  L  L F
Sbjct:   433 A--AFKRLEHKEVLAGLLFLVF 452

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1N5E9 TMTC1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 167 (63.8 bits), Expect = 3.2e-11, P = 3.2e-11
 Identities = 42/82 (51%), Positives = 48/82 (58%)

Query:     7 RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFV-----SCFCV 61
             R LT+ YL  FNVWLLL P  L +DWQ GSIPLV ++ D+RN AT LL V     S  C+
Sbjct:   370 RFLTYSYLLAFNVWLLLAPVTLCYDWQVGSIPLVETIWDIRNGATILLAVVMALLSLHCL 429

Query:    62 AYKAVCDLETFSVLTSLHALAF 83
             A  A   LE   VL  L  L F
Sbjct:   430 A--AFKRLEHREVLVGLLFLVF 449

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|Q8IUR5 TMTC1 "Transmembrane and TPR repeat-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 164 (62.8 bits), Expect = 6.1e-11, P = 6.1e-11
 Identities = 41/82 (50%), Positives = 47/82 (57%)

Query:     7 RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFV-----SCFCV 61
             R LT+ YL  FNVWLLL P  L +DWQ GSIPLV ++ D+RN AT  L V     S  C+
Sbjct:   313 RFLTYSYLLAFNVWLLLAPVTLCYDWQVGSIPLVETIWDMRNLATIFLAVVMALLSLHCL 372

Query:    62 AYKAVCDLETFSVLTSLHALAF 83
             A  A   LE   VL  L  L F
Sbjct:   373 A--AFKRLEHKEVLVGLLFLVF 392

GO:0016021 "integral to membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|F1NNA8 Gga.1615 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 162 (62.1 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 41/83 (49%), Positives = 48/83 (57%)

Query:     7 RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATC-----LLFVSCFCV 61
             R LT+ YL  FN WLLL P  L +DWQ GSIPLV S+ DVRN AT      L+ +S  C+
Sbjct:   377 RFLTYSYLLAFNAWLLLAPITLCYDWQVGSIPLVESVWDVRNLATVFLVLVLVLLSLHCL 436

Query:    62 A-YKAVCDLETFSVLTSLHALAF 83
             A +K    LE   VL  L  L F
Sbjct:   437 AEFKK---LEHKEVLVGLLFLVF 456

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|F1NPM4 TMTC2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 140 (54.3 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 25/57 (43%), Positives = 34/57 (59%)

Query:     7 RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAY 63
             R+LTF YL   N+WLL CP  LS DW   ++PL+ ++ D RN  T   +   F +AY
Sbjct:   247 RMLTFLYLPTKNLWLLFCPDTLSFDWSMDAVPLLKAVSDWRNLHTVAFYAGLFLLAY 303

GO:0005783 "endoplasmic reticulum" evidence=IEA

UNIPROTKB|I3LN91 TMTC2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 132 (51.5 bits), Expect = 2.5e-08, P = 2.5e-08
 Identities = 25/57 (43%), Positives = 33/57 (57%)

Query:     7 RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAY 63
             R LTF YL   N+WLLLCP  LS DW   ++PL+ ++ D RN  T   +     +AY
Sbjct:    24 RTLTFLYLPTKNLWLLLCPDTLSFDWSMDAVPLLKTVCDWRNLHTVAFYAGLLLLAY 80

GO:0005783 "endoplasmic reticulum" evidence=IEA

UNIPROTKB|E1C3P5 TMTC3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 139 (54.0 bits), Expect = 3.0e-08, P = 3.0e-08
 Identities = 31/53 (58%), Positives = 33/53 (62%)

Query:     7 RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCF 59
             R LTF YL   N WLLL P+ L  DW  G+IPLV SL DVRN AT   F  CF
Sbjct:   279 RQLTFNYLLPVNAWLLLNPSELCCDWTMGTIPLVESLLDVRNIATLTFF--CF 329

GO:0009791 "post-embryonic development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA

UNIPROTKB|F1SPX9 TMTC3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 136 (52.9 bits), Expect = 4.0e-08, P = 4.0e-08
 Identities = 29/53 (54%), Positives = 33/53 (62%)

Query:     7 RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCF 59
             R LTF YL   N WLLL P+ L  DW  G+IPL+ S  DVRN AT + F  CF
Sbjct:   284 RQLTFNYLLPVNAWLLLNPSELCCDWTMGTIPLIESFLDVRNLATFIFF--CF 334

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

UNIPROTKB|F1MG00 TMTC2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 135 (52.6 bits), Expect = 5.1e-08, P = 5.1e-08
 Identities = 25/57 (43%), Positives = 33/57 (57%)

Query:     7 RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCVAY 63
             R LTF YL   N+WLLLCP  LS DW   ++PL+ ++ D RN  T   +     +AY
Sbjct:   264 RTLTFFYLPTKNLWLLLCPDTLSFDWSMDAVPLLKTISDWRNLHTVAFYTGLLLLAY 320

GO:0005783 "endoplasmic reticulum" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3UV71	TMTC1_MOUSE	No assigned EC number	0.5365	0.7653	0.0796	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	98
pfam08409	80	pfam08409, DUF1736, Domain of unknown function (DU	6e-18

>gnl|CDD|149463 pfam08409, DUF1736, Domain of unknown function (DUF1736)

 Score = 70.7 bits (174), Expect = 6e-18
 Identities = 25/52 (48%), Positives = 31/52 (59%)

Query: 7  RLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSC 58
          R LT+ YL   N+WLLLCP  L  DW  G IPL+ S+ D RN  T L + + 
Sbjct: 25 RTLTYLYLPAVNLWLLLCPDWLCFDWSMGCIPLIESIWDPRNLLTLLFYSAL 76

This domain of unknown function is found in various hypothetical metazoan proteins. Length = 80

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	98
PF08409	80	DUF1736: Domain of unknown function (DUF1736); Int	99.96

>PF08409 DUF1736: Domain of unknown function (DUF1736); InterPro: IPR013618 This domain of unknown function is found in various hypothetical metazoan proteins

Probab=99.96  E-value=1.1e-30  Score=174.99  Aligned_cols=60  Identities=45%  Similarity=0.781  Sum_probs=57.4

Q ss_pred             CCchhhHHhhhhHHHHHHHHHHhCcccccccCCCCccccCcchhHHHHHHHHHHHHHHHH
Q psy11234          2 GLGTCRLLTFCYLAVFNVWLLLCPAHLSHDWQFGSIPLVTSLGDVRNFATCLLFVSCFCV   61 (98)
Q Consensus         2 ~s~~tR~LT~~YL~~~n~wLLl~P~~Lc~DWSMg~IPlI~S~~D~Rnl~t~~fy~~l~~l   61 (98)
                      .++++|.+||+||+++|+|||++|.+|||||||||||+|||++|+||++|+++|++++++
T Consensus        20 ~~~~tR~LT~~yl~~~n~~LLl~P~~L~~DWSm~~IPli~s~~D~Rn~~tl~~~~~l~~l   79 (80)
T PF08409_consen   20 PSLLTRWLTYNYLPAFNLWLLLFPSWLCFDWSMGCIPLIESLWDPRNLATLLFYSALAAL   79 (80)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHCccccCCcCCCCcccccCccccHHHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999999999999999999988764

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00