Psyllid ID: psy1127

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60-----
Protein Sequence
MRAVYISIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKFFP
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHcccc
Coil and Loop (DISEMBL)
MRAVYISIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYkeqyvkpvktakffp
Flexible Loop (DISEMBL)
MRAVYISIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKFFP
Low Complexity Region (SEG)
MRAVYISIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKFFP
Disordered region (IsUnstruct)
**AVYISIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKT*****
Disordered Region (DISOPRED)
MRAVYISIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYK**************
Disordered Region (DISEMBL)
MRAVYISIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKFFP
Disordered Region (DISPRO)
MRAVYISIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVK******
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRAVYISIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKFFP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	65	2.2.26 [Sep-21-2011]
Q1HRV8	358	Elongation of very long c	N/A	N/A	0.723	0.131	0.787	4e-16
Q9EQC4	312	Elongation of very long c	yes	N/A	0.846	0.176	0.403	0.0006
Q9GZR5	314	Elongation of very long c	yes	N/A	0.8	0.165	0.423	0.0009

>sp|Q1HRV8|ELVL1_AEDAE Elongation of very long chain fatty acids protein AAEL008004 OS=Aedes aegypti GN=AAEL008004 PE=2 SV=2

 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 37/47 (78%), Positives = 40/47 (85%)

Query: 8   IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQY 54
           +QFV IMVHAFQLLFIDCN+PKAFVWWIG HAVMF FLF  FY+  Y
Sbjct: 212 VQFVAIMVHAFQLLFIDCNYPKAFVWWIGMHAVMFLFLFNEFYQSTY 258

Could be implicated in synthesis of very long chain fatty acids.
Aedes aegypti (taxid: 7159)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: nEC: 8

>sp|Q9EQC4|ELOV4_MOUSE Elongation of very long chain fatty acids protein 4 OS=Mus musculus GN=Elovl4 PE=1 SV=2

 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)

Query: 8   IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKP--VKTAK 62
           +QF + + H    L+ DC FPK   W + ++A+ F FLF NFY   Y +P   KT K
Sbjct: 224 VQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYTRTYNEPKQSKTGK 280

Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs) (By similarity). Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum. May play a critical role in early brain and skin development.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q9GZR5|ELOV4_HUMAN Elongation of very long chain fatty acids protein 4 OS=Homo sapiens GN=ELOVL4 PE=1 SV=1

 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 30/52 (57%)

Query: 8   IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVK 59
           IQF + + H    L+ DC FPK   W + ++A+ F FLF NFY   Y +P K
Sbjct: 224 IQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYIRTYKEPKK 275

Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs). Elongates C24:0 and C26:0 acyl-CoAs. Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum. May be implicated in docosahexaenoic acid (DHA) biosynthesis, which requires dietary consumption of the essential alpha-linolenic acid and a subsequent series of three elongation steps. May play a critical role in early brain and skin development.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	65
328696664	307	PREDICTED: elongation of very long chain	0.8	0.169	0.788	1e-17
328696668	308	PREDICTED: elongation of very long chain	0.8	0.168	0.788	1e-17
91090562	325	PREDICTED: similar to CG31522 CG31522-PB	0.723	0.144	0.851	3e-16
307188868	297	Elongation of very long chain fatty acid	0.753	0.164	0.775	5e-16
307192488	344	Elongation of very long chain fatty acid	0.830	0.156	0.740	5e-16
357614994	337	hypothetical protein KGM_16370 [Danaus p	0.846	0.163	0.709	7e-16
156553618	335	PREDICTED: elongation of very long chain	0.8	0.155	0.711	8e-16
390179110	340	GA16297, isoform B [Drosophila pseudoobs	0.723	0.138	0.829	8e-16
195497090	364	GE25348 [Drosophila yakuba] gi|194182055	0.723	0.129	0.829	9e-16
194744853	395	GF18506 [Drosophila ananassae] gi|190627	0.723	0.118	0.829	9e-16

>gi|328696664|ref|XP_001943200.2| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like isoform 1 [Acyrthosiphon pisum] gi|328696666|ref|XP_003240093.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like isoform 2 [Acyrthosiphon pisum]

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/52 (78%), Positives = 47/52 (90%)

Query: 8   IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVK 59
           +QF+ IM+HAFQLLFIDCN+PKAFVWWIG HAVMFFFLF+ FYK+QY KP K
Sbjct: 208 LQFLAIMLHAFQLLFIDCNYPKAFVWWIGMHAVMFFFLFKEFYKQQYTKPAK 259

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328696668|ref|XP_003240094.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like isoform 3 [Acyrthosiphon pisum]

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/52 (78%), Positives = 47/52 (90%)

Query: 8   IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVK 59
           +QF+ IM+HAFQLLFIDCN+PKAFVWWIG HAVMFFFLF+ FYK+QY KP K
Sbjct: 209 LQFLAIMLHAFQLLFIDCNYPKAFVWWIGMHAVMFFFLFKEFYKQQYTKPAK 260

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91090562|ref|XP_971599.1| PREDICTED: similar to CG31522 CG31522-PB [Tribolium castaneum] gi|270013347|gb|EFA09795.1| hypothetical protein TcasGA2_TC011937 [Tribolium castaneum]

 Score = 89.4 bits (220), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/47 (85%), Positives = 44/47 (93%)

Query: 8   IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQY 54
           IQFVL+MVHAFQLLFIDCN+PKAFVWWIG HAVMF+FLF NFYK+ Y
Sbjct: 212 IQFVLVMVHAFQLLFIDCNYPKAFVWWIGLHAVMFYFLFSNFYKQTY 258

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307188868|gb|EFN73421.1| Elongation of very long chain fatty acids protein AAEL008004 [Camponotus floridanus]

 Score = 88.6 bits (218), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 38/49 (77%), Positives = 45/49 (91%)

Query: 8   IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVK 56
           IQF+L+M+HAFQLLFI+CN+PKAFVWWIG HA+MF+FLFR FYKE Y K
Sbjct: 183 IQFILVMIHAFQLLFIECNYPKAFVWWIGMHAIMFYFLFRGFYKEAYKK 231

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307192488|gb|EFN75681.1| Elongation of very long chain fatty acids protein AAEL008004 [Harpegnathos saltator]

 Score = 88.6 bits (218), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 40/54 (74%), Positives = 47/54 (87%)

Query: 8   IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTA 61
           IQFVL+M+HAFQLLFIDCN+PKAFVW+IG HA+MF+FLFRNFY E Y K   T+
Sbjct: 212 IQFVLVMIHAFQLLFIDCNYPKAFVWFIGMHAIMFYFLFRNFYIESYKKKKSTS 265

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357614994|gb|EHJ69416.1| hypothetical protein KGM_16370 [Danaus plexippus]

 Score = 87.8 bits (216), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 39/55 (70%), Positives = 47/55 (85%)

Query: 8   IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAK 62
           +QFV IMVHAFQLLFI+C++P+AFVWWIG HAVMFFFLF++FY + Y KP   AK
Sbjct: 239 VQFVGIMVHAFQLLFIECDYPRAFVWWIGMHAVMFFFLFKDFYNQSYSKPKARAK 293

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156553618|ref|XP_001600048.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Nasonia vitripennis]

 Score = 87.8 bits (216), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 37/52 (71%), Positives = 46/52 (88%)

Query: 8   IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVK 59
           IQFVL+M+HAFQLLFIDC++PKAFVWWIG HAV+F+FLFR+FY + Y K  +
Sbjct: 212 IQFVLVMIHAFQLLFIDCDYPKAFVWWIGMHAVLFYFLFRDFYNQAYTKKAQ 263

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390179110|ref|XP_003736807.1| GA16297, isoform B [Drosophila pseudoobscura pseudoobscura] gi|388859717|gb|EIM52880.1| GA16297, isoform B [Drosophila pseudoobscura pseudoobscura]

 Score = 87.8 bits (216), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 39/47 (82%), Positives = 42/47 (89%)

Query: 8   IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQY 54
           +QF+LIMVHAFQLLFIDCN+PKAFVWWIG HAVMFFFLF  FYK  Y
Sbjct: 175 VQFILIMVHAFQLLFIDCNYPKAFVWWIGMHAVMFFFLFNEFYKAAY 221

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195497090|ref|XP_002095954.1| GE25348 [Drosophila yakuba] gi|194182055|gb|EDW95666.1| GE25348 [Drosophila yakuba]

 Score = 87.4 bits (215), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 39/47 (82%), Positives = 42/47 (89%)

Query: 8   IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQY 54
           +QF+LIMVHAFQLLFIDCN+PKAFVWWIG HAVMFFFLF  FYK  Y
Sbjct: 211 VQFILIMVHAFQLLFIDCNYPKAFVWWIGMHAVMFFFLFNEFYKAAY 257

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194744853|ref|XP_001954907.1| GF18506 [Drosophila ananassae] gi|190627944|gb|EDV43468.1| GF18506 [Drosophila ananassae]

 Score = 87.4 bits (215), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 39/47 (82%), Positives = 42/47 (89%)

Query: 8   IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQY 54
           +QF+LIMVHAFQLLFIDCN+PKAFVWWIG HAVMFFFLF  FYK  Y
Sbjct: 239 VQFILIMVHAFQLLFIDCNYPKAFVWWIGMHAVMFFFLFNEFYKAAY 285

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	65
FB|FBgn0051522	365	CG31522 [Drosophila melanogast	0.723	0.128	0.829	8.4e-19
UNIPROTKB|Q1HRV8	358	AAEL008004 "Elongation of very	0.723	0.131	0.787	2.4e-17
FB|FBgn0037534	329	CG2781 [Drosophila melanogaste	0.753	0.148	0.68	4.3e-14
FB|FBgn0051523	354	CG31523 [Drosophila melanogast	0.8	0.146	0.538	7.3e-12
FB|FBgn0038986	295	CG5278 [Drosophila melanogaste	0.846	0.186	0.418	7.2e-07
UNIPROTKB|J9PBB9	314	ELOVL4 "Uncharacterized protei	0.830	0.171	0.418	8e-06
RGD|1305630	314	Elovl4 "ELOVL fatty acid elong	0.815	0.168	0.396	8e-06
UNIPROTKB|F1NXS3	280	ELOVL4 "Uncharacterized protei	0.846	0.196	0.396	8.2e-06
UNIPROTKB|I3LVJ0	304	LOC100623120 "Uncharacterized	0.830	0.177	0.418	9.7e-06
UNIPROTKB|Q9GZR5	314	ELOVL4 "Elongation of very lon	0.8	0.165	0.423	1e-05

FB|FBgn0051522 CG31522 [Drosophila melanogaster (taxid:7227)]

 Score = 228 (85.3 bits), Expect = 8.4e-19, P = 8.4e-19
 Identities = 39/47 (82%), Positives = 42/47 (89%)

Query:     8 IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQY 54
             +QF+LIMVHAFQLLFIDCN+PKAFVWWIG HAVMFFFLF  FYK  Y
Sbjct:   212 VQFILIMVHAFQLLFIDCNYPKAFVWWIGMHAVMFFFLFNEFYKAAY 258

GO:0000038 "very long-chain fatty acid metabolic process" evidence=ISS

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q1HRV8 AAEL008004 "Elongation of very long chain fatty acids protein AAEL008004" [Aedes aegypti (taxid:7159)]

 Score = 215 (80.7 bits), Expect = 2.4e-17, P = 2.4e-17
 Identities = 37/47 (78%), Positives = 40/47 (85%)

Query:     8 IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQY 54
             +QFV IMVHAFQLLFIDCN+PKAFVWWIG HAVMF FLF  FY+  Y
Sbjct:   212 VQFVAIMVHAFQLLFIDCNYPKAFVWWIGMHAVMFLFLFNEFYQSTY 258

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=ISS

FB|FBgn0037534 CG2781 [Drosophila melanogaster (taxid:7227)]

 Score = 185 (70.2 bits), Expect = 4.3e-14, P = 4.3e-14
 Identities = 34/50 (68%), Positives = 41/50 (82%)

Query:     8 IQFVLIMVHAFQLLFI-DCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVK 56
             IQFVL+MVH+FQL F  DCN+P  F ++IG+HAVMF+FLF NFYK  YVK
Sbjct:   211 IQFVLVMVHSFQLFFKNDCNYPIGFAYFIGAHAVMFYFLFSNFYKRAYVK 260

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=ISS

GO:0030497 "fatty acid elongation" evidence=ISS

GO:0009922 "fatty acid elongase activity" evidence=ISS

GO:0003843 "1,3-beta-D-glucan synthase activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0051523 CG31523 [Drosophila melanogaster (taxid:7227)]

 Score = 166 (63.5 bits), Expect = 7.3e-12, P = 7.3e-12
 Identities = 28/52 (53%), Positives = 37/52 (71%)

Query:     8 IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVK 59
             +QFV I  H FQLLF +C++PK F+ WIG H VMF FLF +FYK +Y+   +
Sbjct:   212 VQFVAIFTHQFQLLFRECDYPKGFMVWIGLHGVMFLFLFSDFYKAKYLNAAR 263

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

GO:0000038 "very long-chain fatty acid metabolic process" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0038986 CG5278 [Drosophila melanogaster (taxid:7227)]

 Score = 119 (46.9 bits), Expect = 7.2e-07, P = 7.2e-07
 Identities = 23/55 (41%), Positives = 33/55 (60%)

Query:     8 IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAK 62
             IQF    +H  QLL+ DC +P+  V +   +AV F+FLF +FY++ Y K    AK
Sbjct:   210 IQFCCAFIHQTQLLYTDCGYPRWSVCFTLPNAVFFYFLFNDFYQKSYKKKQAAAK 264

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|J9PBB9 ELOVL4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 110 (43.8 bits), Expect = 8.0e-06, P = 8.0e-06
 Identities = 23/55 (41%), Positives = 32/55 (58%)

Query:     8 IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAK 62
             +QF + + H    L+ DC FPK   W + ++A+ F FLF NFY   Y +P K AK
Sbjct:   224 VQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYVRTYKEP-KKAK 277

GO:0016021 "integral to membrane" evidence=IEA

RGD|1305630 Elovl4 "ELOVL fatty acid elongase 4" [Rattus norvegicus (taxid:10116)]

 Score = 110 (43.8 bits), Expect = 8.0e-06, P = 8.0e-06
 Identities = 21/53 (39%), Positives = 31/53 (58%)

Query:     8 IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKT 60
             +QF + + H    L+ DC FPK   W + ++A+ F FLF NFY   Y +P K+
Sbjct:   224 VQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYTRTYNEPKKS 276

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0008150 "biological_process" evidence=ND

GO:0019367 "fatty acid elongation, saturated fatty acid" evidence=IEA;ISO

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IEA;ISO

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=ISO

UNIPROTKB|F1NXS3 ELOVL4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 109 (43.4 bits), Expect = 8.2e-06, P = 8.2e-06
 Identities = 23/58 (39%), Positives = 32/58 (55%)

Query:     8 IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYV---KPVKTAK 62
             +QF + + H    ++IDC FPK   W +  +A+ F FLF NFY   Y    +PVK  K
Sbjct:   190 VQFHVTIGHTALSIYIDCPFPKWMHWGVIFYAITFIFLFGNFYYRTYKLPKEPVKNGK 247

GO:0019367 "fatty acid elongation, saturated fatty acid" evidence=IEA

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IEA

UNIPROTKB|I3LVJ0 LOC100623120 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 109 (43.4 bits), Expect = 9.7e-06, P = 9.7e-06
 Identities = 23/55 (41%), Positives = 32/55 (58%)

Query:     8 IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAK 62
             +QF + + H    L+ DC FPK   W + ++A+ F FLF NFY   Y +P K AK
Sbjct:   214 VQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYVRTYNEP-KKAK 267

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9GZR5 ELOVL4 "Elongation of very long chain fatty acids protein 4" [Homo sapiens (taxid:9606)]

 Score = 109 (43.4 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 22/52 (42%), Positives = 30/52 (57%)

Query:     8 IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVK 59
             IQF + + H    L+ DC FPK   W + ++A+ F FLF NFY   Y +P K
Sbjct:   224 IQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYIRTYKEPKK 275

GO:0016740 "transferase activity" evidence=IEA

GO:0008020 "G-protein coupled photoreceptor activity" evidence=NAS

GO:0006633 "fatty acid biosynthetic process" evidence=NAS

GO:0019367 "fatty acid elongation, saturated fatty acid" evidence=IDA

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=ISS;IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IDA

GO:0019432 "triglyceride biosynthetic process" evidence=TAS

GO:0035338 "long-chain fatty-acyl-CoA biosynthetic process" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0009584 "detection of visible light" evidence=NAS

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	65
pfam01151	244	pfam01151, ELO, GNS1/SUR4 family	0.001

>gnl|CDD|216332 pfam01151, ELO, GNS1/SUR4 family

 Score = 34.5 bits (80), Expect = 0.001
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 5/60 (8%)

Query: 8   IQFVLIMVHAFQLLFI----DCNFPKAFVWWIG-SHAVMFFFLFRNFYKEQYVKPVKTAK 62
           IQFVL + H    L+      C  P      +G  + V + FLF NFY + Y KP K  K
Sbjct: 185 IQFVLGLAHVGYALYNYTKGGCGGPFPKAVRLGLVYYVSYLFLFLNFYIKSYKKPKKKKK 244

Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 affects plasma membrane H+-ATPase activity, and may act on a glucose-signaling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1. Length = 244

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	65
PF01151	250	ELO: GNS1/SUR4 family; InterPro: IPR002076 This gr	99.74
PTZ00251	272	fatty acid elongase; Provisional	99.69
KOG3071|consensus	274		99.63
KOG3072|consensus	282		99.09

>PF01151 ELO: GNS1/SUR4 family; InterPro: IPR002076 This group of eukaryotic integral membrane proteins are evolutionary related, but exact function has not yet clearly been established

Probab=99.74  E-value=6.3e-18  Score=110.95  Aligned_cols=61  Identities=33%  Similarity=0.520  Sum_probs=56.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhh------cC---CCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCC
Q psy1127           2 RAVYISIQFVLIMVHAFQLLFI------DC---NFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAK   62 (65)
Q Consensus         2 iT~~QiiQF~~~~~~~~~~~~~------~C---~~p~~~~~~~~~~~~s~l~LF~~FY~~sY~~~~~~~~   62 (65)
                      ||.+||+||++++++..+....      ||   ++|+....++.++++++++||.|||+|+|.+|+++||
T Consensus       181 IT~~Qi~QF~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~s~l~LF~~Fy~~~Y~~~~~~k~  250 (250)
T PF01151_consen  181 ITSLQIVQFVIGIVHTVYALYYYFFPGGDCDTSGYPKFNAILGLVYYVSYLYLFINFYIKSYIKKKKKKK  250 (250)
T ss_pred             HhHHhhhhhHHHHHHHHHHhheeccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCCC
Confidence            8999999999999998887754      89   7789999999999999999999999999999888775

The proteins have from 290 to 435 amino acid residues. Structurally, they seem to be formed of three sections: a N-terminal region with two transmembrane domains, a central hydrophilic loop and a C-terminal region that contains from one to three transmembrane domains. Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis []. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 (P40319 from SWISSPROT) affects plasma membrane H+-ATPase activity, and may act on a glucose-signalling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1 []. ; GO: 0016021 integral to membrane

>PTZ00251 fatty acid elongase; Provisional

Probab=99.69  E-value=1.3e-16  Score=106.47  Aligned_cols=61  Identities=18%  Similarity=0.169  Sum_probs=53.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHh--------hcCCCcH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCC
Q psy1127           2 RAVYISIQFVLIMVHAFQLLF--------IDCNFPK-AFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAK   62 (65)
Q Consensus         2 iT~~QiiQF~~~~~~~~~~~~--------~~C~~p~-~~~~~~~~~~~s~l~LF~~FY~~sY~~~~~~~~   62 (65)
                      ||.+||+||++++.|..+.+.        .+|++|. ...+.+.++++|+++||.|||+|+|.++||+++
T Consensus       201 IT~lQi~Qfv~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~s~l~LF~~Fy~~~Y~~~~~~~~  270 (272)
T PTZ00251        201 ITLLQITQMVGGLFVSGYVIVQKLTKGDPKGCSGTTMATARGQLMIYIFNFYLFSEMFVKGYVLPRKAKA  270 (272)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            899999999999999887763        3699887 677778899999999999999999999877664

>KOG3071|consensus

Probab=99.63  E-value=9e-16  Score=102.66  Aligned_cols=59  Identities=32%  Similarity=0.612  Sum_probs=52.8

Q ss_pred             hHHHHHHHHHHHHHHHHHH-Hh-hcCCCcHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Q psy1127           2 RAVYISIQFVLIMVHAFQL-LF-IDCNFPKA-FVWWIGSHAVMFFFLFRNFYKEQYVKPVKT   60 (65)
Q Consensus         2 iT~~QiiQF~~~~~~~~~~-~~-~~C~~p~~-~~~~~~~~~~s~l~LF~~FY~~sY~~~~~~   60 (65)
                      +|.+|++||++..+|..+. ++ +||++|.+ +++.+.+++++++.||+|||+|+|+|++++
T Consensus       203 ~t~vQlvqf~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~l~LF~nFY~~tY~k~~~~  264 (274)
T KOG3071|consen  203 ITIVQLVQFLILFVHTLYVHLFKPGCCFGIGAWAFNGSVINVSFLLLFSNFYIKTYKKPKKK  264 (274)
T ss_pred             HHHHHHHHHHHHHHHHhheeeecCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            6999999999999999988 55 58999999 877889999999999999999999986544

>KOG3072|consensus

Probab=99.09  E-value=6.4e-11  Score=79.57  Aligned_cols=56  Identities=18%  Similarity=0.227  Sum_probs=47.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHH---h-h--cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy1127           2 RAVYISIQFVLIMVHAFQLL---F-I--DCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKP   57 (65)
Q Consensus         2 iT~~QiiQF~~~~~~~~~~~---~-~--~C~~p~~~~~~~~~~~~s~l~LF~~FY~~sY~~~   57 (65)
                      ||.+||+||+++........   . .  +|........++.++.++|++||.|||.++|+++
T Consensus       207 iTtlQi~Qm~i~~~i~~~v~~~~~~~~~~c~~s~~~~~l~~~my~syfvLf~~Ff~~aYi~~  268 (282)
T KOG3072|consen  207 ITTLQIVQMVIGCYIGTHVYYVKHTHQLLCQQSYKNLSLCFLMYISYFVLFANFFYQAYIKK  268 (282)
T ss_pred             HHHHHHHHHHHHHheeeEEEEEEecCCeeeeeeccchhhHHHHHHHHHHHHHHHHHHHHhhh
Confidence            89999999999876544332   1 2  2999888889999999999999999999999986

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00