Psyllid ID: psy1130

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-----
Protein Sequence
MSGWLTGDYSFKCQPLDLGNHPRTMRIQFVLIMVHAFQLLFIDCNFPKAFIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKACTQKVPDSVPGKVEVFSTLCLKFGVYSAF
Secondary Structure (PSIPRED)
cccccccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccEEEcccccccccccHHEEEEEEEEEEHHHHHEEcccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccEEEEEEEEEcccccccc
Coil and Loop (DISEMBL)
msgwltgdysfkcqpldlgnhprtmRIQFVLIMVHAFQLLFIDCNFPKAFIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFykeqyvkpvktakactqkvpdsvpgkVEVFSTLCLkfgvysaf
Flexible Loop (DISEMBL)
msgwltgdysfkCQPLDLGNHPRTMRIQFVLIMVHAFQLLFIDCNFPKAFIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTakactqkvpdsvpgkvEVFSTLCLKFGVYSAF
Low Complexity Region (SEG)
MSGWLTGDYSFKCQPLDLGNHPRTMRIQFVLIMVHAFQLLFIDCNFPKAFIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKACTQKVPDSVPGKVEVFSTLCLKFGVYSAF
Disordered region (IsUnstruct)
***WLTGDYSFKCQPLDLGNHPRTMRIQFVLIMVHAFQLLFIDCNFPKAFIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKACTQKVPDSVPGKVEVFSTLCLKFGVY***
Disordered Region (DISOPRED)
**GW*TGDYSFKCQPLDLGNHPRTMRIQFVLIMVHAFQLLFIDCNFPKAFIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYK*****************************************
Disordered Region (DISEMBL)
MSGWLTGDYSFKCQPLDLGNHPRTMRIQFVLIMVHAFQLLFIDCNFPKAFIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKACTQKVPDSVPGKVEVFSTLCLKFGVYSAF
Disordered Region (DISPRO)
***WLTGDYSFKCQPLDLGNHPRTMRIQFVLIMVHAFQLLFIDCNFPKAFIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKA***KVPDSVPGKVEVFSTLCLKFGVYSAF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSGWLTGDYSFKCQPLDLGNHPRTMRIQFVLIMVHAFQLLFIDCNFPKAFIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKACTQKVPDSVPGKVEVFSTLCLKFGVYSAF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	135	2.2.26 [Sep-21-2011]
Q1HRV8	358	Elongation of very long c	N/A	N/A	0.303	0.114	0.787	3e-16
Q9EQC4	312	Elongation of very long c	yes	N/A	0.525	0.227	0.356	2e-05
Q9GZR5	314	Elongation of very long c	yes	N/A	0.6	0.257	0.333	0.0002
Q3S8M4	314	Elongation of very long c	yes	N/A	0.6	0.257	0.320	0.0003
Q95K73	314	Elongation of very long c	N/A	N/A	0.6	0.257	0.320	0.0003

>sp|Q1HRV8|ELVL1_AEDAE Elongation of very long chain fatty acids protein AAEL008004 OS=Aedes aegypti GN=AAEL008004 PE=2 SV=2

 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 37/47 (78%), Positives = 40/47 (85%)

Query: 51  IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQY 97
           +QFV IMVHAFQLLFIDCN+PKAFVWWIG HAVMF FLF  FY+  Y
Sbjct: 212 VQFVAIMVHAFQLLFIDCNYPKAFVWWIGMHAVMFLFLFNEFYQSTY 258

Could be implicated in synthesis of very long chain fatty acids.
Aedes aegypti (taxid: 7159)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: nEC: 8

>sp|Q9EQC4|ELOV4_MOUSE Elongation of very long chain fatty acids protein 4 OS=Mus musculus GN=Elovl4 PE=1 SV=2

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)

Query: 50  FIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKP--VKTAKAC 107
            +QF + + H    L+ DC FPK   W + ++A+ F FLF NFY   Y +P   KT K  
Sbjct: 223 LVQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYTRTYNEPKQSKTGKTA 282

Query: 108 TQKVPDSVPGKVE 120
           T  +  +   K E
Sbjct: 283 TNGISSNGVNKSE 295

Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs) (By similarity). Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum. May play a critical role in early brain and skin development.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q9GZR5|ELOV4_HUMAN Elongation of very long chain fatty acids protein 4 OS=Homo sapiens GN=ELOVL4 PE=1 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 38/81 (46%)

Query: 50  FIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKACTQ 109
            IQF + + H    L+ DC FPK   W + ++A+ F FLF NFY   Y +P K     T 
Sbjct: 223 LIQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYIRTYKEPKKPKAGKTA 282

Query: 110 KVPDSVPGKVEVFSTLCLKFG 130
               S  G  +    L ++ G
Sbjct: 283 MNGISANGVSKSEKQLMIENG 303

Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs). Elongates C24:0 and C26:0 acyl-CoAs. Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum. May be implicated in docosahexaenoic acid (DHA) biosynthesis, which requires dietary consumption of the essential alpha-linolenic acid and a subsequent series of three elongation steps. May play a critical role in early brain and skin development.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q3S8M4|ELOV4_MACMU Elongation of very long chain fatty acids protein 4 OS=Macaca mulatta GN=ELOVL4 PE=3 SV=1

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 38/81 (46%)

Query: 50  FIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKACTQ 109
            +QF + + H    L+ DC FPK   W + ++A+ F FLF NFY   Y +P K     T 
Sbjct: 223 LVQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYIRTYKEPKKPKTGKTA 282

Query: 110 KVPDSVPGKVEVFSTLCLKFG 130
               S  G  +    L ++ G
Sbjct: 283 MNGISANGVSKSEKQLVIENG 303

Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs) (By similarity). Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum (By similarity). May play a critical role in early brain and skin development.

Macaca mulatta (taxid: 9544)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q95K73|ELOV4_MACFA Elongation of very long chain fatty acids protein 4 OS=Macaca fascicularis GN=ELOVL4 PE=2 SV=1

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 38/81 (46%)

Query: 50  FIQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKACTQ 109
            +QF + + H    L+ DC FPK   W + ++A+ F FLF NFY   Y +P K     T 
Sbjct: 223 LVQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYIRTYKEPKKPKTGKTA 282

Query: 110 KVPDSVPGKVEVFSTLCLKFG 130
               S  G  +    L ++ G
Sbjct: 283 MNGISANGVSKSEKQLVIENG 303

Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs) (By similarity). Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum (By similarity). May play a critical role in early brain and skin development.

Macaca fascicularis (taxid: 9541)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	135
328696668	308	PREDICTED: elongation of very long chain	0.444	0.194	0.7	3e-18
328696664	307	PREDICTED: elongation of very long chain	0.444	0.195	0.7	4e-18
307210364	369	Elongation of very long chain fatty acid	0.518	0.189	0.633	1e-17
357614994	337	hypothetical protein KGM_16370 [Danaus p	0.592	0.237	0.541	3e-17
307192488	344	Elongation of very long chain fatty acid	0.503	0.197	0.617	7e-17
307188868	297	Elongation of very long chain fatty acid	0.451	0.205	0.639	2e-16
242023582	357	elongation of very long chain fatty acid	0.444	0.168	0.633	2e-16
357614996	299	hypothetical protein KGM_16387 [Danaus p	0.533	0.240	0.541	3e-16
91090562	325	PREDICTED: similar to CG31522 CG31522-PB	0.348	0.144	0.851	3e-16
340722212	320	PREDICTED: elongation of very long chain	0.511	0.215	0.585	5e-16

>gi|328696668|ref|XP_003240094.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like isoform 3 [Acyrthosiphon pisum]

 Score = 96.3 bits (238), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 42/60 (70%), Positives = 48/60 (80%)

Query: 51  IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKACTQK 110
           +QF+ IM+HAFQLLFIDCN+PKAFVWWIG HAVMFFFLF+ FYK+QY KP K       K
Sbjct: 209 LQFLAIMLHAFQLLFIDCNYPKAFVWWIGMHAVMFFFLFKEFYKQQYTKPAKQTAGAQSK 268

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328696664|ref|XP_001943200.2| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like isoform 1 [Acyrthosiphon pisum] gi|328696666|ref|XP_003240093.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like isoform 2 [Acyrthosiphon pisum]

 Score = 95.9 bits (237), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 42/60 (70%), Positives = 48/60 (80%)

Query: 51  IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKACTQK 110
           +QF+ IM+HAFQLLFIDCN+PKAFVWWIG HAVMFFFLF+ FYK+QY KP K       K
Sbjct: 208 LQFLAIMLHAFQLLFIDCNYPKAFVWWIGMHAVMFFFLFKEFYKQQYTKPAKQTAGAQSK 267

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307210364|gb|EFN86956.1| Elongation of very long chain fatty acids protein AAEL008004 [Harpegnathos saltator]

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/71 (63%), Positives = 53/71 (74%), Gaps = 1/71 (1%)

Query: 51  IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQY-VKPVKTAKACTQ 109
           +QF+ IM+HAFQLLFI+CN+PKAFVWWIG HAVMFFFLF+ FY++ Y  KP K A A   
Sbjct: 235 LQFIAIMIHAFQLLFIECNYPKAFVWWIGLHAVMFFFLFKEFYQQSYQQKPRKRAGAVAN 294

Query: 110 KVPDSVPGKVE 120
            V  S  G VE
Sbjct: 295 GVAKSHRGSVE 305

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357614994|gb|EHJ69416.1| hypothetical protein KGM_16370 [Danaus plexippus]

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/85 (54%), Positives = 59/85 (69%), Gaps = 5/85 (5%)

Query: 51  IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKACTQK 110
           +QFV IMVHAFQLLFI+C++P+AFVWWIG HAVMFFFLF++FY + Y KP   AK+    
Sbjct: 239 VQFVGIMVHAFQLLFIECDYPRAFVWWIGMHAVMFFFLFKDFYNQSYSKPKARAKS---- 294

Query: 111 VPDSVPGKVEVFSTLCLKFGVYSAF 135
            P  V  K+E    +  K GV + +
Sbjct: 295 -PVPVQTKIEDVMDITYKNGVKNGY 318

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307192488|gb|EFN75681.1| Elongation of very long chain fatty acids protein AAEL008004 [Harpegnathos saltator]

 Score = 92.0 bits (227), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 52/68 (76%)

Query: 51  IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKACTQK 110
           IQFVL+M+HAFQLLFIDCN+PKAFVW+IG HA+MF+FLFRNFY E Y K   T+    Q 
Sbjct: 212 IQFVLVMIHAFQLLFIDCNYPKAFVWFIGMHAIMFYFLFRNFYIESYKKKKSTSALKKQT 271

Query: 111 VPDSVPGK 118
           + ++   K
Sbjct: 272 LKNTEDNK 279

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307188868|gb|EFN73421.1| Elongation of very long chain fatty acids protein AAEL008004 [Camponotus floridanus]

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 39/61 (63%), Positives = 48/61 (78%)

Query: 51  IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKACTQK 110
           IQF+L+M+HAFQLLFI+CN+PKAFVWWIG HA+MF+FLFR FYKE Y K      +  +K
Sbjct: 183 IQFILVMIHAFQLLFIECNYPKAFVWWIGMHAIMFYFLFRGFYKEAYKKKNSANTSGKRK 242

Query: 111 V 111
            
Sbjct: 243 A 243

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242023582|ref|XP_002432211.1| elongation of very long chain fatty acids protein, putative [Pediculus humanus corporis] gi|212517608|gb|EEB19473.1| elongation of very long chain fatty acids protein, putative [Pediculus humanus corporis]

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/60 (63%), Positives = 50/60 (83%)

Query: 51  IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKACTQK 110
           IQFVL+M+HAFQLLFI+CN+P+AFVWWIG HA+MF+FLF +FYK+ Y+K  +  K   +K
Sbjct: 222 IQFVLVMIHAFQLLFIECNYPQAFVWWIGLHAIMFYFLFADFYKQAYLKKERAKKIANEK 281

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357614996|gb|EHJ69418.1| hypothetical protein KGM_16387 [Danaus plexippus]

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 55/72 (76%)

Query: 51  IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKACTQK 110
           +QFVL+  HAFQLLFIDC++P+AFVWWIG HAV+F++LF +FYK+ Y+K VK +K+   +
Sbjct: 203 VQFVLVFFHAFQLLFIDCDYPRAFVWWIGMHAVLFYYLFSDFYKQAYLKKVKRSKSKEIE 262

Query: 111 VPDSVPGKVEVF 122
           V   V  K  ++
Sbjct: 263 VESKVESKDRMY 274

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91090562|ref|XP_971599.1| PREDICTED: similar to CG31522 CG31522-PB [Tribolium castaneum] gi|270013347|gb|EFA09795.1| hypothetical protein TcasGA2_TC011937 [Tribolium castaneum]

 Score = 89.7 bits (221), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/47 (85%), Positives = 44/47 (93%)

Query: 51  IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQY 97
           IQFVL+MVHAFQLLFIDCN+PKAFVWWIG HAVMF+FLF NFYK+ Y
Sbjct: 212 IQFVLVMVHAFQLLFIDCNYPKAFVWWIGLHAVMFYFLFSNFYKQTY 258

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340722212|ref|XP_003399502.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Bombus terrestris]

 Score = 89.0 bits (219), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 41/70 (58%), Positives = 53/70 (75%), Gaps = 1/70 (1%)

Query: 51  IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKACTQK 110
           +QF+L+++HAFQLLFIDCN+PK FVWWIG H VMF+FLFRNFY + Y K  K+  A T+K
Sbjct: 212 VQFILVVLHAFQLLFIDCNYPKVFVWWIGLHGVMFYFLFRNFYNQSYGKR-KSPNALTKK 270

Query: 111 VPDSVPGKVE 120
             +S   K +
Sbjct: 271 ETESQNEKKQ 280

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	135
FB|FBgn0051522	365	CG31522 [Drosophila melanogast	0.348	0.128	0.829	3.8e-29
FB|FBgn0037534	329	CG2781 [Drosophila melanogaste	0.362	0.148	0.68	1.3e-18
UNIPROTKB|Q1HRV8	358	AAEL008004 "Elongation of very	0.407	0.153	0.714	8.4e-18
FB|FBgn0051523	354	CG31523 [Drosophila melanogast	0.385	0.146	0.538	4.8e-17
UNIPROTKB|Q3T120	279	ELOVL1 "Uncharacterized protei	0.503	0.243	0.328	4.9e-11
FB|FBgn0038983	277	CG5326 [Drosophila melanogaste	0.444	0.216	0.354	1.3e-09
UNIPROTKB|Q9BW60	279	ELOVL1 "Elongation of very lon	0.503	0.243	0.328	1.2e-08
RGD|1587151	279	Elovl1 "ELOVL fatty acid elong	0.437	0.211	0.344	4.1e-08
MGI|MGI:1858959	279	Elovl1 "elongation of very lon	0.437	0.211	0.344	5.1e-08
UNIPROTKB|I3LQY5	295	ELOVL1 "Uncharacterized protei	0.496	0.227	0.310	2.6e-07

FB|FBgn0051522 CG31522 [Drosophila melanogaster (taxid:7227)]

 Score = 228 (85.3 bits), Expect = 3.8e-29, Sum P(2) = 3.8e-29
 Identities = 39/47 (82%), Positives = 42/47 (89%)

Query:    51 IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQY 97
             +QF+LIMVHAFQLLFIDCN+PKAFVWWIG HAVMFFFLF  FYK  Y
Sbjct:   212 VQFILIMVHAFQLLFIDCNYPKAFVWWIGMHAVMFFFLFNEFYKAAY 258

GO:0000038 "very long-chain fatty acid metabolic process" evidence=ISS

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0037534 CG2781 [Drosophila melanogaster (taxid:7227)]

 Score = 185 (70.2 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
 Identities = 34/50 (68%), Positives = 41/50 (82%)

Query:    51 IQFVLIMVHAFQLLFI-DCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVK 99
             IQFVL+MVH+FQL F  DCN+P  F ++IG+HAVMF+FLF NFYK  YVK
Sbjct:   211 IQFVLVMVHSFQLFFKNDCNYPIGFAYFIGAHAVMFYFLFSNFYKRAYVK 260

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=ISS

GO:0030497 "fatty acid elongation" evidence=ISS

GO:0009922 "fatty acid elongase activity" evidence=ISS

GO:0003843 "1,3-beta-D-glucan synthase activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q1HRV8 AAEL008004 "Elongation of very long chain fatty acids protein AAEL008004" [Aedes aegypti (taxid:7159)]

 Score = 219 (82.2 bits), Expect = 8.4e-18, P = 8.4e-18
 Identities = 40/56 (71%), Positives = 44/56 (78%)

Query:    51 IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKA 106
             +QFV IMVHAFQLLFIDCN+PKAFVWWIG HAVMF FLF  FY+  Y K  K  +A
Sbjct:   212 VQFVAIMVHAFQLLFIDCNYPKAFVWWIGMHAVMFLFLFNEFYQSTY-KATKRRRA 266

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=ISS

FB|FBgn0051523 CG31523 [Drosophila melanogaster (taxid:7227)]

 Score = 166 (63.5 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
 Identities = 28/52 (53%), Positives = 37/52 (71%)

Query:    51 IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVK 102
             +QFV I  H FQLLF +C++PK F+ WIG H VMF FLF +FYK +Y+   +
Sbjct:   212 VQFVAIFTHQFQLLFRECDYPKGFMVWIGLHGVMFLFLFSDFYKAKYLNAAR 263

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

GO:0000038 "very long-chain fatty acid metabolic process" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q3T120 ELOVL1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 99 (39.9 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
 Identities = 24/73 (32%), Positives = 37/73 (50%)

Query:    51 IQFVLIMVHAFQLLFI-DCNFP-KAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKACT 108
             IQFVL+ +H  Q  F+  CN+     +  I  +  +FF LF NF+ + Y K  +  +   
Sbjct:   207 IQFVLVSLHISQYYFLPSCNYQYPVIIHLIWMYGTIFFVLFSNFWYQSYTKGKRLPRVSQ 266

Query:   109 QKVPDSVPGKVEV 121
             Q   + VPG  +V
Sbjct:   267 Q---NGVPGTTKV 276

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=IEA

GO:0034625 "fatty acid elongation, monounsaturated fatty acid" evidence=IEA

GO:0030148 "sphingolipid biosynthetic process" evidence=IEA

GO:0019367 "fatty acid elongation, saturated fatty acid" evidence=IEA

GO:0009922 "fatty acid elongase activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0038983 CG5326 [Drosophila melanogaster (taxid:7227)]

 Score = 99 (39.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
 Identities = 22/62 (35%), Positives = 34/62 (54%)

Query:    51 IQFVLIMVHAFQLLFI-DCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKT-AKACT 108
             +QF++I VH  Q+ F  +CNFPK+    +  +A +F ++F  FY   Y K     AK   
Sbjct:   215 VQFLIIFVHTLQIQFQPNCNFPKSIAALLTFNAGLFTYMFSAFYVANYKKEAAAQAKLAA 274

Query:   109 QK 110
             +K
Sbjct:   275 KK 276

GO:0016021 "integral to membrane" evidence=IEA

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB|Q9BW60 ELOVL1 "Elongation of very long chain fatty acids protein 1" [Homo sapiens (taxid:9606)]

 Score = 95 (38.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
 Identities = 24/73 (32%), Positives = 36/73 (49%)

Query:    51 IQFVLIMVHAFQLLFID-CNFP-KAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKACT 108
             IQFVL+ +H  Q  F+  CN+     +  I  +  +FF LF NF+   Y K  +  +A  
Sbjct:   207 IQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYGTIFFMLFSNFWYHSYTKGKRLPRALQ 266

Query:   109 QKVPDSVPGKVEV 121
             Q   +  PG  +V
Sbjct:   267 Q---NGAPGIAKV 276

GO:0019367 "fatty acid elongation, saturated fatty acid" evidence=IDA

GO:0030148 "sphingolipid biosynthetic process" evidence=IMP

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=NAS

GO:0009922 "fatty acid elongase activity" evidence=IDA

GO:0034625 "fatty acid elongation, monounsaturated fatty acid" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0019432 "triglyceride biosynthetic process" evidence=TAS

GO:0035338 "long-chain fatty-acyl-CoA biosynthetic process" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

RGD|1587151 Elovl1 "ELOVL fatty acid elongase 1" [Rattus norvegicus (taxid:10116)]

 Score = 91 (37.1 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
 Identities = 21/61 (34%), Positives = 31/61 (50%)

Query:    51 IQFVLIMVHAFQLLFI-DCNFP-KAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKACT 108
             IQFVL+ +H  Q  F+  CN+     +  I  +  +FF LF NF+   Y K  +  +A  
Sbjct:   207 IQFVLVSLHISQYYFMPSCNYQYPIIIHLIWMYGTIFFILFSNFWYHSYTKGKRLPRAVQ 266

Query:   109 Q 109
             Q
Sbjct:   267 Q 267

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO

GO:0009922 "fatty acid elongase activity" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0019367 "fatty acid elongation, saturated fatty acid" evidence=IEA;ISO

GO:0030148 "sphingolipid biosynthetic process" evidence=IEA;ISO

GO:0034625 "fatty acid elongation, monounsaturated fatty acid" evidence=IEA;ISO

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=IEA;ISO

MGI|MGI:1858959 Elovl1 "elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1" [Mus musculus (taxid:10090)]

 Score = 91 (37.1 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
 Identities = 21/61 (34%), Positives = 31/61 (50%)

Query:    51 IQFVLIMVHAFQLLFI-DCNFP-KAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKACT 108
             IQFVL+ +H  Q  F+  CN+     +  I  +  +FF LF NF+   Y K  +  +A  
Sbjct:   207 IQFVLVSLHISQYYFMPSCNYQYPIIIHLIWMYGTIFFILFSNFWYHSYTKGKRLPRAVQ 266

Query:   109 Q 109
             Q
Sbjct:   267 Q 267

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0009922 "fatty acid elongase activity" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0019367 "fatty acid elongation, saturated fatty acid" evidence=ISO

GO:0030148 "sphingolipid biosynthetic process" evidence=ISO;IMP

GO:0034625 "fatty acid elongation, monounsaturated fatty acid" evidence=ISO

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=ISO

UNIPROTKB|I3LQY5 ELOVL1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 89 (36.4 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
 Identities = 23/74 (31%), Positives = 35/74 (47%)

Query:    51 IQFVLIMVHAFQLLFI---DCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAKAC 107
             +QFVL+ +H  Q  F+   D  FP   +  I  +  +FF LF NF+ + Y K  +  +  
Sbjct:   223 VQFVLVSLHVSQYYFVPACDYQFP-VIIHLIWVYGTVFFALFSNFWYQAYTKGKRLPRVL 281

Query:   108 TQKVPDSVPGKVEV 121
              Q   +  PG   V
Sbjct:   282 PQ---NGAPGTARV 292

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=IEA

GO:0034625 "fatty acid elongation, monounsaturated fatty acid" evidence=IEA

GO:0030148 "sphingolipid biosynthetic process" evidence=IEA

GO:0019367 "fatty acid elongation, saturated fatty acid" evidence=IEA

GO:0009922 "fatty acid elongase activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	135
pfam01151	244	pfam01151, ELO, GNS1/SUR4 family	6e-05

>gnl|CDD|216332 pfam01151, ELO, GNS1/SUR4 family

 Score = 40.7 bits (96), Expect = 6e-05
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 5/60 (8%)

Query: 51  IQFVLIMVHAFQLLFI----DCNFPKAFVWWIG-SHAVMFFFLFRNFYKEQYVKPVKTAK 105
           IQFVL + H    L+      C  P      +G  + V + FLF NFY + Y KP K  K
Sbjct: 185 IQFVLGLAHVGYALYNYTKGGCGGPFPKAVRLGLVYYVSYLFLFLNFYIKSYKKPKKKKK 244

Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 affects plasma membrane H+-ATPase activity, and may act on a glucose-signaling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1. Length = 244

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	135
KOG3071|consensus	274		99.6
PF01151	250	ELO: GNS1/SUR4 family; InterPro: IPR002076 This gr	99.35
PTZ00251	272	fatty acid elongase; Provisional	99.23
KOG3072|consensus	282		98.11
KOG3071|consensus	274		90.2
PF01151	250	ELO: GNS1/SUR4 family; InterPro: IPR002076 This gr	84.29

>KOG3071|consensus

Probab=99.60  E-value=1.7e-15  Score=123.47  Aligned_cols=103  Identities=28%  Similarity=0.581  Sum_probs=83.4

Q ss_pred             CCCCCCcceeeeccCCCCCcchhHHHH------------------------------HHHHhhhhhhhc-------ccCC
Q psy1130           3 GWLTGDYSFKCQPLDLGNHPRTMRIQF------------------------------VLIMVHAFQLLF-------IDCN   45 (135)
Q Consensus         3 ~~~~~~y~~~c~~~~~~~~~~~~~IQF------------------------------viv~~H~~~~lf-------~~Cg   45 (135)
                      .|..++|++.||++++.++|.++|+-+                              .|++||+.+++.       .++|
T Consensus        85 ~~~~~~y~l~c~~~~~~~~~~~~r~~~~~~~yylsKflel~DTvFfVLRKk~rqlsFLHvyHH~~m~~~~~~~l~~~~~g  164 (274)
T KOG3071|consen   85 RWLKTAYNLRCQPCFPSDHEPKLRERFWSYLYYLSKFLELLDTVFFVLRKKDRQLSFLHVYHHGVMAFLSYLWLKFYGGG  164 (274)
T ss_pred             hhhccccceEEEecCCCCCCcceeehHHHHHHHHHHHHHHHhheeeEEEccCCceEEEEEEecchHHHhhhheeEEeCCc
Confidence            566656999999999999998888766                              378888777764       1222


Q ss_pred             c---------------------------------------hHHHHHHHHHHHHHHhh-hcc-CCCCchH-HHHHHHHHHH
Q psy1130          46 F---------------------------------------PKAFIQFVLIMVHAFQL-LFI-DCNFPKA-FVWWIGSHAV   83 (135)
Q Consensus        46 ~---------------------------------------p~QliQFvi~~~~~~~~-LF~-nC~~p~~-~~~~~~~~~~   83 (135)
                      .                                       ..|++||++...|.... ++. ||++|++ +.+....+++
T Consensus       165 ~~~~~~~lNs~VHviMY~YYflsa~G~~v~~~lWWkky~t~vQlvqf~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~  244 (274)
T KOG3071|consen  165 HGFFAILLNSFVHVIMYGYYFLSAFGPRVQWYLWWKKYITIVQLVQFLILFVHTLYVHLFKPGCCFGIGAWAFNGSVINV  244 (274)
T ss_pred             eeeeeeehhhhHHHHHHHHHHHHhhCcCccccchHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCchHHHHHHHHHHHH
Confidence            2                                       36999999999999998 775 8999999 6667688999


Q ss_pred             HHHHHHHhHHHHhhcCCccccc
Q psy1130          84 MFFFLFRNFYKEQYVKPVKTAK  105 (135)
Q Consensus        84 ~~l~LF~~FY~ksY~~~~~~~~  105 (135)
                      +|+.||.|||+|+|+|+++++.
T Consensus       245 ~~l~LF~nFY~~tY~k~~~~~~  266 (274)
T KOG3071|consen  245 SFLLLFSNFYIKTYKKPKKKKA  266 (274)
T ss_pred             HHHHHHHHHHHHHhccccccch
Confidence            9999999999999998766554

>PF01151 ELO: GNS1/SUR4 family; InterPro: IPR002076 This group of eukaryotic integral membrane proteins are evolutionary related, but exact function has not yet clearly been established

Probab=99.35  E-value=3.1e-12  Score=102.42  Aligned_cols=58  Identities=34%  Similarity=0.577  Sum_probs=52.1

Q ss_pred             HHHHHHHHHHHHHHhhhcc------CC---CCchHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccc
Q psy1130          48 KAFIQFVLIMVHAFQLLFI------DC---NFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAK  105 (135)
Q Consensus        48 ~QliQFvi~~~~~~~~LF~------nC---~~p~~~~~~~~~~~~~~l~LF~~FY~ksY~~~~~~~~  105 (135)
                      .||+||++...+....++.      +|   ++|+....+...+.+++++||.|||+|+|++++++|+
T Consensus       184 ~Qi~QF~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~s~l~LF~~Fy~~~Y~~~~~~k~  250 (250)
T PF01151_consen  184 LQIVQFVIGIVHTVYALYYYFFPGGDCDTSGYPKFNAILGLVYYVSYLYLFINFYIKSYIKKKKKKK  250 (250)
T ss_pred             HhhhhhHHHHHHHHHHhheeccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCCC
Confidence            7999999999988888775      89   7889999999999999999999999999998877763

The proteins have from 290 to 435 amino acid residues. Structurally, they seem to be formed of three sections: a N-terminal region with two transmembrane domains, a central hydrophilic loop and a C-terminal region that contains from one to three transmembrane domains. Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis []. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 (P40319 from SWISSPROT) affects plasma membrane H+-ATPase activity, and may act on a glucose-signalling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1 []. ; GO: 0016021 integral to membrane

>PTZ00251 fatty acid elongase; Provisional

Probab=99.23  E-value=3.8e-11  Score=97.93  Aligned_cols=58  Identities=19%  Similarity=0.191  Sum_probs=48.3

Q ss_pred             HHHHHHHHHHHHHHhhhc--------cCCCCch-HHHHHHHHHHHHHHHHHHhHHHHhhcCCccccc
Q psy1130          48 KAFIQFVLIMVHAFQLLF--------IDCNFPK-AFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAK  105 (135)
Q Consensus        48 ~QliQFvi~~~~~~~~LF--------~nC~~p~-~~~~~~~~~~~~~l~LF~~FY~ksY~~~~~~~~  105 (135)
                      .|++||++...+....+.        .+|++|. ........+++++++||.|||+|+|+++||+++
T Consensus       204 lQi~Qfv~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~s~l~LF~~Fy~~~Y~~~~~~~~  270 (272)
T PTZ00251        204 LQITQMVGGLFVSGYVIVQKLTKGDPKGCSGTTMATARGQLMIYIFNFYLFSEMFVKGYVLPRKAKA  270 (272)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            699999999888877664        2699887 566666789999999999999999998776664

>KOG3072|consensus

Probab=98.11  E-value=2e-06  Score=70.55  Aligned_cols=54  Identities=19%  Similarity=0.258  Sum_probs=43.1

Q ss_pred             HHHHHHHHHHHHHHhh---hc-cC--CCCchHHHHHHHHHHHHHHHHHHhHHHHhhcCCc
Q psy1130          48 KAFIQFVLIMVHAFQL---LF-ID--CNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPV  101 (135)
Q Consensus        48 ~QliQFvi~~~~~~~~---LF-~n--C~~p~~~~~~~~~~~~~~l~LF~~FY~ksY~~~~  101 (135)
                      .|++||++.......+   .- .+  |........++.++.+++++||+|||+++|++++
T Consensus       210 lQi~Qm~i~~~i~~~v~~~~~~~~~~c~~s~~~~~l~~~my~syfvLf~~Ff~~aYi~~g  269 (282)
T KOG3072|consen  210 LQIVQMVIGCYIGTHVYYVKHTHQLLCQQSYKNLSLCFLMYISYFVLFANFFYQAYIKKG  269 (282)
T ss_pred             HHHHHHHHHHheeeEEEEEEecCCeeeeeeccchhhHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            7999998876533322   21 23  9988888889999999999999999999999974

>KOG3071|consensus

Probab=90.20  E-value=0.33  Score=40.09  Aligned_cols=42  Identities=31%  Similarity=0.577  Sum_probs=30.4

Q ss_pred             hHHHHHHHHhhhhhh-hcc-cCCchHHHHHHH-HHHHHHHhhhcc
Q psy1130          25 MRIQFVLIMVHAFQL-LFI-DCNFPKAFIQFV-LIMVHAFQLLFI   66 (135)
Q Consensus        25 ~~IQFviv~~H~~~~-lf~-~Cg~p~QliQFv-i~~~~~~~~LF~   66 (135)
                      -.+||++++.|+.+. ++. +|.+|+....+. .....++..||.
T Consensus       207 Qlvqf~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~l~LF~  251 (274)
T KOG3071|consen  207 QLVQFLILFVHTLYVHLFKPGCCFGIGAWAFNGSVINVSFLLLFS  251 (274)
T ss_pred             HHHHHHHHHHHHhheeeecCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence            357889999999999 776 899999844444 445555555553

>PF01151 ELO: GNS1/SUR4 family; InterPro: IPR002076 This group of eukaryotic integral membrane proteins are evolutionary related, but exact function has not yet clearly been established

Probab=84.29  E-value=1.1  Score=35.77  Aligned_cols=41  Identities=32%  Similarity=0.583  Sum_probs=30.1

Q ss_pred             hHHHHHHHHhhhhhhhcc------cC---CchHHHHHHHHHHHHHHhhhc
Q psy1130          25 MRIQFVLIMVHAFQLLFI------DC---NFPKAFIQFVLIMVHAFQLLF   65 (135)
Q Consensus        25 ~~IQFviv~~H~~~~lf~------~C---g~p~QliQFvi~~~~~~~~LF   65 (135)
                      -++||++.++|....++.      +|   ++|....-+...+..++..||
T Consensus       185 Qi~QF~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~s~l~LF  234 (250)
T PF01151_consen  185 QIVQFVIGIVHTVYALYYYFFPGGDCDTSGYPKFNAILGLVYYVSYLYLF  234 (250)
T ss_pred             hhhhhHHHHHHHHHHhheeccCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Confidence            367999999998888876      89   777766666666666666665

The proteins have from 290 to 435 amino acid residues. Structurally, they seem to be formed of three sections: a N-terminal region with two transmembrane domains, a central hydrophilic loop and a C-terminal region that contains from one to three transmembrane domains. Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis []. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 (P40319 from SWISSPROT) affects plasma membrane H+-ATPase activity, and may act on a glucose-signalling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1 []. ; GO: 0016021 integral to membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00