Psyllid ID: psy11346

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------22
Protein Sequence
METIMINFPFGFVGAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEKAKIVVTSGYKIYRDEVQFYNQEDIGKSNPTNKAKEMEYMGRWSTLAFDTHNQRTTTQ
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcccccHHHHHHHHHcccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHEEEEcccEEEEccccHHHHHHHHHHHHHHHHHHHHccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHHHEEEEEEccccEEEEccHHHHHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccccccccccccccccccccEEccccccccccc
Coil and Loop (DISEMBL)
metiminfpfgfvgaiifPTLITGYIFVFLATVcdayfvpciDIVCQKLELSNDVAGATlmasgtsspELFINLIGTfitegdvgtgtVVGSGVFNMLAVPALCILLCRSqkirldywpltrDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEKAKIVVTSGYKIYRDEVqfynqedigksnptnkakeMEYMGrwstlafdthnqrtttq
Flexible Loop (DISEMBL)
METIMINFPFGFVGAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEKAKIVVTSGYKIYRDEVQfynqedigksnptnKAKEMEYMGRWstlafdthnqrtttq
Low Complexity Region (SEG)
METIMINFPFGFVGAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDvgtgtvvgsgvFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEKAKIVVTSGYKIYRDEVQFYNQEDIGKSNPTNKAKEMEYMGRWSTLAFDTHNQRTTTQ
Disordered region (IsUnstruct)
***IMINFPFGFVGAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEKAKIVVTSGYKIYRDEVQFYNQ*******************RWSTL************
Disordered Region (DISOPRED)
*ETIMINFPFGFVGAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEKAKIVVTSGYKIYR********************************************
Disordered Region (DISEMBL)
METIMINFPFGFVGAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEKAKIVVTSGYKIYRDEVQFYNQEDIGKSNPTNKAKEMEYMGRWSTLAFDT********
Disordered Region (DISPRO)
METIMINFPFGFVGAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEKAKIVVTSGYKIYRDEVQ*YNQE***********************************
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
METIMINFPFGFVGAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEKAKIVVTSGYKIYRDEVQFYNQEDIGKSNPTNKAKEMEYMGRWSTLAFDTHNQRTTTQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	219	2.2.26 [Sep-21-2011]
Q8NFF2	622	Sodium/potassium/calcium	yes	N/A	0.803	0.282	0.413	2e-36
Q8CGQ8	622	Sodium/potassium/calcium	yes	N/A	0.803	0.282	0.413	2e-35
Q9EPQ0	624	Sodium/potassium/calcium	yes	N/A	0.666	0.233	0.496	1e-34
Q9HC58	644	Sodium/potassium/calcium	no	N/A	0.666	0.226	0.489	2e-34
Q99PD7	645	Sodium/potassium/calcium	no	N/A	0.666	0.226	0.489	3e-34
Q9IAL7	651	Sodium/potassium/calcium	no	N/A	0.835	0.281	0.401	1e-32
Q28139	1216	Sodium/potassium/calcium	no	N/A	0.611	0.110	0.466	2e-32
O54701	670	Sodium/potassium/calcium	no	N/A	0.666	0.217	0.455	1e-31
Q9UI40	661	Sodium/potassium/calcium	no	N/A	0.666	0.220	0.455	1e-31
O60721	1099	Sodium/potassium/calcium	no	N/A	0.611	0.121	0.474	2e-31

>sp|Q8NFF2|NCKX4_HUMAN Sodium/potassium/calcium exchanger 4 OS=Homo sapiens GN=SLC24A4 PE=2 SV=2

 Score =  152 bits (383), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/184 (41%), Positives = 112/184 (60%), Gaps = 8/184 (4%)

Query: 14  GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
           GA++   L   Y+F  LA VCD +FVP ++ +C++L LS DVAGAT MA+G+S+PELF +
Sbjct: 98  GAVLLHILGALYMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSTPELFAS 157

Query: 74  LIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
           +IG FIT GDVG GT+VGS VFN+L +  +C L    Q +RL +W + RDS+ Y ++V++
Sbjct: 158 VIGVFITHGDVGVGTIVGSAVFNILCIIGVCGLFA-GQVVRLTWWAVCRDSVYYTISVIV 216

Query: 134 LAFSLQDGKVMWYEALSMVFFYYFYIIEKAKIVVTSGYKIYRDEVQFYNQEDIGKSNPTN 193
           L   + D +++W+E L ++  Y FYI+          Y +         Q+ I   NP N
Sbjct: 217 LIVFIYDEQIVWWEGLVLIILYVFYIL-------IMKYNVKMQAFFTVKQKSIANGNPVN 269

Query: 194 KAKE 197
              E
Sbjct: 270 SELE 273

Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).
Homo sapiens (taxid: 9606)

>sp|Q8CGQ8|NCKX4_MOUSE Sodium/potassium/calcium exchanger 4 OS=Mus musculus GN=Slc24a4 PE=2 SV=2

 Score =  149 bits (375), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 76/184 (41%), Positives = 112/184 (60%), Gaps = 8/184 (4%)

Query: 14  GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
           GA++   L   Y+F  LA VCD +FVP ++ +C+KL LS DVAGAT MA+G+S+PELF +
Sbjct: 98  GAVLLHILGALYMFYALAIVCDDFFVPSLEKICEKLHLSEDVAGATFMAAGSSTPELFAS 157

Query: 74  LIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
           +IG FIT GDVG GT+VGS VFN+L +  +C L    Q +RL +W + RDS+ Y ++V++
Sbjct: 158 VIGVFITHGDVGVGTIVGSAVFNILCIIGVCGLFA-GQVVRLTWWAVCRDSVYYTLSVIV 216

Query: 134 LAFSLQDGKVMWYEALSMVFFYYFYIIEKAKIVVTSGYKIYRDEVQFYNQEDIGKSNPTN 193
           L   + D +++W+E L ++  Y FYI+          Y +         Q+ I   NP +
Sbjct: 217 LIAFIYDEEIVWWEGLVLIILYVFYIL-------IMKYNMKMQTFFTTKQKSIANGNPVS 269

Query: 194 KAKE 197
              E
Sbjct: 270 NELE 273

Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Mus musculus (taxid: 10090)

>sp|Q9EPQ0|NCKX3_RAT Sodium/potassium/calcium exchanger 3 (Fragment) OS=Rattus norvegicus GN=Slc24a3 PE=2 SV=1

 Score =  146 bits (368), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 73/147 (49%), Positives = 100/147 (68%), Gaps = 1/147 (0%)

Query: 14  GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
           GA++   L   Y+F  LA VCD +FVP ++ +C++L LS DVAGAT MA+G+S+PELF +
Sbjct: 89  GAVVLHVLCAMYMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFTS 148

Query: 74  LIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
           +IG FIT+GDVG GT+VGS VFN+L +  +C L    Q + L  W L RDSI Y ++V+ 
Sbjct: 149 VIGVFITKGDVGVGTIVGSAVFNILCIIGVCGLFA-GQVVALSSWCLLRDSIYYTLSVVA 207

Query: 134 LAFSLQDGKVMWYEALSMVFFYYFYII 160
           L   + D KV W+E+L +V  Y  YII
Sbjct: 208 LIVFIYDEKVSWWESLVLVLMYLIYII 234

Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Rattus norvegicus (taxid: 10116)

>sp|Q9HC58|NCKX3_HUMAN Sodium/potassium/calcium exchanger 3 OS=Homo sapiens GN=SLC24A3 PE=2 SV=4

 Score =  145 bits (366), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 72/147 (48%), Positives = 100/147 (68%), Gaps = 1/147 (0%)

Query: 14  GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
           GA++   L   Y+F  LA VCD +FVP ++ +C++L LS DVAGAT MA+G+S+PELF +
Sbjct: 108 GAVVLHVLCAIYMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFTS 167

Query: 74  LIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
           +IG FIT+GDVG GT+VGS VFN+L +  +C L    Q + L  W L RDSI Y ++V+ 
Sbjct: 168 VIGVFITKGDVGVGTIVGSAVFNILCIIGVCGLFA-GQVVALSSWCLLRDSIYYTLSVIA 226

Query: 134 LAFSLQDGKVMWYEALSMVFFYYFYII 160
           L   + D KV W+E+L +V  Y  YI+
Sbjct: 227 LIVFIYDEKVSWWESLVLVLMYLIYIV 253

Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Homo sapiens (taxid: 9606)

>sp|Q99PD7|NCKX3_MOUSE Sodium/potassium/calcium exchanger 3 OS=Mus musculus GN=Slc24a3 PE=2 SV=3

 Score =  145 bits (365), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 72/147 (48%), Positives = 100/147 (68%), Gaps = 1/147 (0%)

Query: 14  GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
           GA++   L   Y+F  LA VCD +FVP ++ +C++L LS DVAGAT MA+G+S+PELF +
Sbjct: 107 GAVVLHVLCAMYMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFTS 166

Query: 74  LIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
           +IG FIT+GDVG GT+VGS VFN+L +  +C L    Q + L  W L RDSI Y ++V+ 
Sbjct: 167 VIGVFITKGDVGVGTIVGSAVFNILCIIGVCGLFA-GQVVALSSWCLLRDSIYYTLSVVA 225

Query: 134 LAFSLQDGKVMWYEALSMVFFYYFYII 160
           L   + D KV W+E+L +V  Y  YI+
Sbjct: 226 LIVFIYDEKVSWWESLVLVLMYLIYIV 252

Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Mus musculus (taxid: 10090)

>sp|Q9IAL7|NCKX2_CHICK Sodium/potassium/calcium exchanger 2 OS=Gallus gallus GN=SLC24A2 PE=2 SV=1

 Score =  139 bits (351), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 116/187 (62%), Gaps = 4/187 (2%)

Query: 14  GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
           GA+I   +   Y+F+ LA VCD +FVP + ++ +KL +S+DVAGAT MA+G S+PELF +
Sbjct: 135 GAVILHVIGMIYMFIALAIVCDEFFVPSLTVITEKLSISDDVAGATFMAAGGSAPELFTS 194

Query: 74  LIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
           LIG FI+  +VG GT+VGS VFN+L V  +C L  R + + L +WPL RD   Y+V +++
Sbjct: 195 LIGVFISHSNVGIGTIVGSAVFNILFVIGMCALFSR-EILNLTWWPLFRDVSFYIVDLIL 253

Query: 134 LAFSLQDGKVMWYEALSMVFFYYFYI-IEKAKIVVTSGYK--IYRDEVQFYNQEDIGKSN 190
           L     D  +MW+E+L+++  Y+ Y+   K  + V    K  + R++V+     D    +
Sbjct: 254 LIIFFLDNLIMWWESLTLLTAYFCYVTFMKFNVQVEEWVKKVLNRNKVEKATTGDAEGKS 313

Query: 191 PTNKAKE 197
           PT   K+
Sbjct: 314 PTAGDKD 320

Critical component of the visual transduction cascade, controlling the calcium concentration of outer segments during light and darkness. Light causes a rapid lowering of cytosolic free calcium in the outer segment of both retinal rod and cone photoreceptors and the light-induced lowering of calcium is caused by extrusion via this protein which plays a key role in the process of light adaptation. Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Gallus gallus (taxid: 9031)

>sp|Q28139|NCKX1_BOVIN Sodium/potassium/calcium exchanger 1 OS=Bos taurus GN=SLC24A1 PE=1 SV=2

 Score =  139 bits (349), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/135 (46%), Positives = 90/135 (66%), Gaps = 1/135 (0%)

Query: 25  YIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDV 84
           Y+FV LA VCD YFVP + ++  KL++S DVAGAT MA+G S+PELF +LIG FI+  +V
Sbjct: 458 YVFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFISHSNV 517

Query: 85  GTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVM 144
           G GT+VGS VFN+L V   C L  R + + L +WPL RD   Y+  +++L     D  + 
Sbjct: 518 GIGTIVGSAVFNILFVIGTCALFSR-EILNLTWWPLFRDITFYIFDLMMLILFFLDSLIA 576

Query: 145 WYEALSMVFFYYFYI 159
           W+E++ ++  Y FY+
Sbjct: 577 WWESVLLLLAYAFYV 591

Critical component of the visual transduction cascade, controlling the calcium concentration of outer segments during light and darkness. Light causes a rapid lowering of cytosolic free calcium in the outer segment of both retinal rod and cone photoreceptors and the light-induced lowering of calcium is caused by extrusion via this protein which plays a key role in the process of light adaptation. Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Bos taurus (taxid: 9913)

>sp|O54701|NCKX2_RAT Sodium/potassium/calcium exchanger 2 OS=Rattus norvegicus GN=Slc24a2 PE=2 SV=1

 Score =  136 bits (343), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/147 (45%), Positives = 99/147 (67%), Gaps = 1/147 (0%)

Query: 14  GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
           GAII   +   Y+F+ LA VCD +FVP + ++ +KL +S+DVAGAT MA+G S+PELF +
Sbjct: 134 GAIILHVIGMIYMFIALAIVCDEFFVPSLTVITEKLGISDDVAGATFMAAGGSAPELFTS 193

Query: 74  LIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
           LIG FI   +VG GT+VGS VFN+L V  +C L  R + + L +WPL RD   Y+V +++
Sbjct: 194 LIGVFIAHSNVGIGTIVGSAVFNILFVIGMCALFSR-EILNLTWWPLFRDVSFYIVDLIM 252

Query: 134 LAFSLQDGKVMWYEALSMVFFYYFYII 160
           L     D  +MW+E+L ++  Y+ Y++
Sbjct: 253 LIIFFLDNVIMWWESLLLLTAYFAYVV 279

Critical component of the visual transduction cascade, controlling the calcium concentration of outer segments during light and darkness. Light causes a rapid lowering of cytosolic free calcium in the outer segment of both retinal rod and cone photoreceptors and the light-induced lowering of calcium is caused by extrusion via this protein which plays a key role in the process of light adaptation. Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Rattus norvegicus (taxid: 10116)

>sp|Q9UI40|NCKX2_HUMAN Sodium/potassium/calcium exchanger 2 OS=Homo sapiens GN=SLC24A2 PE=1 SV=1

 Score =  136 bits (342), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/147 (45%), Positives = 99/147 (67%), Gaps = 1/147 (0%)

Query: 14  GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
           GAII   +   Y+F+ LA VCD +FVP + ++ +KL +S+DVAGAT MA+G S+PELF +
Sbjct: 133 GAIILHVIGMIYMFIALAIVCDEFFVPSLTVITEKLGISDDVAGATFMAAGGSAPELFTS 192

Query: 74  LIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
           LIG FI   +VG GT+VGS VFN+L V  +C L  R + + L +WPL RD   Y+V +++
Sbjct: 193 LIGVFIAHSNVGIGTIVGSAVFNILFVIGMCALFSR-EILNLTWWPLFRDVSFYIVDLIM 251

Query: 134 LAFSLQDGKVMWYEALSMVFFYYFYII 160
           L     D  +MW+E+L ++  Y+ Y++
Sbjct: 252 LIIFFLDNVIMWWESLLLLTAYFCYVV 278

Critical component of the visual transduction cascade, controlling the calcium concentration of outer segments during light and darkness. Light causes a rapid lowering of cytosolic free calcium in the outer segment of both retinal rod and cone photoreceptors and the light-induced lowering of calcium is caused by extrusion via this protein which plays a key role in the process of light adaptation. Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Homo sapiens (taxid: 9606)

>sp|O60721|NCKX1_HUMAN Sodium/potassium/calcium exchanger 1 OS=Homo sapiens GN=SLC24A1 PE=1 SV=1

 Score =  135 bits (341), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 64/135 (47%), Positives = 91/135 (67%), Gaps = 1/135 (0%)

Query: 25  YIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDV 84
           Y+FV LA VCD YFVP + ++  KL++S DVAGAT MA+G S+PELF +LIG FI+  +V
Sbjct: 464 YVFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFISHSNV 523

Query: 85  GTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVM 144
           G GT+VGS VFN+L V   C L  R + + L +WPL RD   Y++ +++L     D  + 
Sbjct: 524 GIGTIVGSAVFNILFVIGTCSLFSR-EILNLTWWPLFRDVSFYILDLIMLILFFLDSLIA 582

Query: 145 WYEALSMVFFYYFYI 159
           W+E+L ++  Y FY+
Sbjct: 583 WWESLLLLLAYAFYV 597

Critical component of the visual transduction cascade, controlling the calcium concentration of outer segments during light and darkness. Light causes a rapid lowering of cytosolic free calcium in the outer segment of both retinal rod and cone photoreceptors and the light-induced lowering of calcium is caused by extrusion via this protein which plays a key role in the process of light adaptation. Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+).

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	219
345496252	549	PREDICTED: sodium/potassium/calcium exch	0.803	0.320	0.505	4e-42
357627304	538	potassium-dependent sodium-calcium excha	0.849	0.345	0.432	4e-41
345496250	481	PREDICTED: LOW QUALITY PROTEIN: sodium/p	0.666	0.303	0.541	4e-40
242016141	484	sodium/potassium/calcium exchanger 5 pre	0.662	0.299	0.554	4e-40
307195200	448	Sodium/potassium/calcium exchanger 4 [Ha	0.662	0.323	0.554	4e-40
328793656	450	PREDICTED: sodium/potassium/calcium exch	0.671	0.326	0.547	4e-40
158287819	563	AGAP010975-PA [Anopheles gambiae str. PE	0.662	0.257	0.575	1e-39
170036446	544	potassium-dependent sodium-calcium excha	0.662	0.266	0.575	2e-39
195042562	603	GH12048 [Drosophila grimshawi] gi|193901	0.662	0.240	0.561	4e-39
281366822	542	CG2893, isoform F [Drosophila melanogast	0.662	0.267	0.561	4e-39

>gi|345496252|ref|XP_001603085.2| PREDICTED: sodium/potassium/calcium exchanger 4-like [Nasonia vitripennis]

 Score =  176 bits (447), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 93/184 (50%), Positives = 121/184 (65%), Gaps = 8/184 (4%)

Query: 14  GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
           G I+   +I  Y F  LA VCD +FVP I  +C K+ +S DVAGAT MA+ +SSPELFIN
Sbjct: 105 GFIVIHVIIACYAFFLLAIVCDDFFVPSIVKICDKIGMSKDVAGATFMAAASSSPELFIN 164

Query: 74  LIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
           ++GTF+TEGD+G GT+VGS VFN+LAVPA C L   SQ + LD+WP++RDS+ Y V VL+
Sbjct: 165 IVGTFVTEGDLGVGTIVGSAVFNILAVPACCGLFA-SQVLDLDWWPISRDSLAYGVTVLL 223

Query: 134 LAFSLQDGKVMWYEALSMVFFYYFYIIEKAKIVVTSG-----YKIYRDEVQFYNQED--I 186
           L F+L DG++ WYEA  +V FY FYI+        SG         R + +  N+E   I
Sbjct: 224 LIFTLHDGRIEWYEAFILVLFYIFYILAMVFNKRISGCLNLFVSKRRRKYKNLNEESPLI 283

Query: 187 GKSN 190
           GK N
Sbjct: 284 GKEN 287

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357627304|gb|EHJ77040.1| potassium-dependent sodium-calcium exchanger [Danaus plexippus]

 Score =  173 bits (439), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 87/201 (43%), Positives = 129/201 (64%), Gaps = 15/201 (7%)

Query: 14  GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
           G I+   ++  Y F+ L TVC+ YFVP I+I+C++L++++DVAGAT MA+ +SSPELFIN
Sbjct: 104 GYILIHCVLAIYCFLLLGTVCEQYFVPAIEIICERLDMASDVAGATFMAAASSSPELFIN 163

Query: 74  LIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
            +GTF+TEGD+G G +VGS VFN+LAVPA C L+   + I LD+W ++RD ++Y VAV+ 
Sbjct: 164 CVGTFVTEGDLGVGAIVGSAVFNVLAVPACCALVA-GKSIELDWWSVSRDCMMYAVAVVA 222

Query: 134 LAFSLQDGKVMWYEALSMVFFYYFYII-----------EKAKIVVTSGYKIYRDEVQFYN 182
           L  +L D KV WYEAL +V  Y FYI+            ++     +  K Y +     +
Sbjct: 223 LILTLLDDKVFWYEALLLVLMYTFYILAMVYNGSLGSFARSGCCYFNKPKKYTEITPLLH 282

Query: 183 QEDIGKSNPTNKAKEMEYMGR 203
           +E   KSNP   ++ M ++ +
Sbjct: 283 KE---KSNPLEASQRMTHVNQ 300

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345496250|ref|XP_003427682.1| PREDICTED: LOW QUALITY PROTEIN: sodium/potassium/calcium exchanger 3-like [Nasonia vitripennis]

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 79/146 (54%), Positives = 105/146 (71%)

Query: 14  GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
           GA++   L++ Y+F+ LA VCD +FVP ++ +C  L +S DVAGAT MA+ TS+PELF+N
Sbjct: 44  GAVVVHVLVSLYLFIALAVVCDKFFVPAVEKICHALSMSKDVAGATFMAAATSAPELFVN 103

Query: 74  LIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
            IGTFITEGD+G GT+VGS VFN+LAVPA C +    Q + LD+WP++RD + Y V V I
Sbjct: 104 AIGTFITEGDIGVGTIVGSAVFNILAVPACCGIGAGMQVVPLDWWPVSRDCLAYGVTVAI 163

Query: 134 LAFSLQDGKVMWYEALSMVFFYYFYI 159
           L   + D +V WYEALS+V  Y  YI
Sbjct: 164 LICIIHDERVEWYEALSLVLLYIVYI 189

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242016141|ref|XP_002428694.1| sodium/potassium/calcium exchanger 5 precursor, putative [Pediculus humanus corporis] gi|212513365|gb|EEB15956.1| sodium/potassium/calcium exchanger 5 precursor, putative [Pediculus humanus corporis]

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 81/146 (55%), Positives = 107/146 (73%), Gaps = 1/146 (0%)

Query: 14  GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
           GAI+    +  Y+FV L  VCD YFVP I  +C++L +S DVAGAT MA+ TSSPELFIN
Sbjct: 45  GAIVLHCFLAFYMFVLLNFVCDDYFVPSIKTLCERLSISKDVAGATFMAAATSSPELFIN 104

Query: 74  LIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
           +IGTF+T+GD+G GT+VGS VFN+LAVPA C LL   Q +++D+WPLTRD  +Y + V++
Sbjct: 105 IIGTFVTKGDLGVGTIVGSAVFNILAVPACCGLL-GGQSVKIDWWPLTRDCFVYGLTVVL 163

Query: 134 LAFSLQDGKVMWYEALSMVFFYYFYI 159
           L   L +G + W EAL +V  Y+FYI
Sbjct: 164 LIIFLNNGYIAWNEALILVILYFFYI 189

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307195200|gb|EFN77184.1| Sodium/potassium/calcium exchanger 4 [Harpegnathos saltator]

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 81/146 (55%), Positives = 110/146 (75%), Gaps = 1/146 (0%)

Query: 14  GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
           G II   +I  Y+F+ LA VCD YFVP I  +C KL ++ DVAGAT+MA+ +SSPELFIN
Sbjct: 88  GFIIVHFVIAIYLFLLLAIVCDDYFVPSIKKICDKLNVTEDVAGATVMAAASSSPELFIN 147

Query: 74  LIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
           +IGTF+TEGD+G GT+VGS VFN+LAVPA C L   +Q + L++WP++RD++ Y   V++
Sbjct: 148 VIGTFVTEGDLGVGTIVGSAVFNILAVPACCALFA-NQVLNLEWWPVSRDTLAYAFTVIL 206

Query: 134 LAFSLQDGKVMWYEALSMVFFYYFYI 159
           L  +L+DG++ WYEAL +VF Y  YI
Sbjct: 207 LILTLRDGRIEWYEALILVFCYILYI 232

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328793656|ref|XP_395777.4| PREDICTED: sodium/potassium/calcium exchanger 5-like [Apis mellifera]

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 81/148 (54%), Positives = 111/148 (75%), Gaps = 1/148 (0%)

Query: 13  VGAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFI 72
           +G I+   +I  Y+F+ LA VCD +FVP I  +C K+ +S DVAGAT+MA+ TSSPELFI
Sbjct: 89  LGFILIHFVIAIYMFLLLAIVCDDFFVPSIKKICDKINVSEDVAGATIMATATSSPELFI 148

Query: 73  NLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVL 132
           N++GTFITEGD+G GT+VGS VFN+LAVPA C L   +Q + L+ WP+TRD+I Y + V 
Sbjct: 149 NIVGTFITEGDLGVGTIVGSAVFNILAVPACCGLFA-NQILNLEAWPVTRDTIAYAITVF 207

Query: 133 ILAFSLQDGKVMWYEALSMVFFYYFYII 160
           +L  +L+DG++ WYEAL +V  Y+ YI+
Sbjct: 208 LLILTLRDGRIEWYEALILVLSYFLYIL 235

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158287819|ref|XP_001688244.1| AGAP010975-PA [Anopheles gambiae str. PEST] gi|157019372|gb|EDO64434.1| AGAP010975-PA [Anopheles gambiae str. PEST]

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 84/146 (57%), Positives = 109/146 (74%), Gaps = 1/146 (0%)

Query: 14  GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
           G I+   +I  Y F  LA VCD YFVP I+++C+KL++  DVAGAT MA+ +SSPELFIN
Sbjct: 137 GWILVHIVIACYCFWLLAIVCDDYFVPAIELMCKKLQVKEDVAGATFMAAASSSPELFIN 196

Query: 74  LIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
            +GTF+T+GD+G G VVGS VFN+LAVPA+C LL   Q ++L +WP+TRDS++Y +AV+ 
Sbjct: 197 CVGTFVTKGDLGVGAVVGSAVFNILAVPAVCGLL-GGQVVQLRWWPVTRDSMMYGIAVMG 255

Query: 134 LAFSLQDGKVMWYEALSMVFFYYFYI 159
           L   L DGKVMWYEA  +V  Y FYI
Sbjct: 256 LIGVLYDGKVMWYEATVLVSAYVFYI 281

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170036446|ref|XP_001846075.1| potassium-dependent sodium-calcium exchanger [Culex quinquefasciatus] gi|167879047|gb|EDS42430.1| potassium-dependent sodium-calcium exchanger [Culex quinquefasciatus]

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 84/146 (57%), Positives = 106/146 (72%), Gaps = 1/146 (0%)

Query: 14  GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
           G I    LI  Y F  LA VCD YFVP I+++C+KL++  DVAGAT MA+ +SSPELFIN
Sbjct: 118 GWIAVHVLIACYCFWLLAIVCDDYFVPAIELMCKKLQVKEDVAGATFMAAASSSPELFIN 177

Query: 74  LIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
            +GTF+T+GD+G G VVGS VFN+LAVPA+C L    Q ++L +WP+TRDS++Y VAV+ 
Sbjct: 178 CVGTFVTKGDIGVGAVVGSAVFNILAVPAVCGLF-GGQVVQLSWWPVTRDSMMYGVAVIA 236

Query: 134 LAFSLQDGKVMWYEALSMVFFYYFYI 159
           L   L DGKVMWYEA  +V  Y  YI
Sbjct: 237 LITVLIDGKVMWYEAAILVSAYVLYI 262

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195042562|ref|XP_001991456.1| GH12048 [Drosophila grimshawi] gi|193901214|gb|EDW00081.1| GH12048 [Drosophila grimshawi]

 Score =  167 bits (422), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 82/146 (56%), Positives = 104/146 (71%), Gaps = 1/146 (0%)

Query: 14  GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
           GA++   + + Y+FV LA VCD YFVP ++ +C  L +SNDVAGAT MA+ TS+PELF+N
Sbjct: 36  GAVVLHVIASLYLFVALAVVCDEYFVPAVEKICAALNMSNDVAGATFMAAATSAPELFVN 95

Query: 74  LIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
           +IGTFITEGD+G GT+VGS VFN+LAV A C  +     I LD+WPLTRDSI Y V V I
Sbjct: 96  VIGTFITEGDIGVGTIVGSAVFNILAVAACC-GIGAGMTIPLDWWPLTRDSIAYGVTVAI 154

Query: 134 LAFSLQDGKVMWYEALSMVFFYYFYI 159
           L   + D +V WYEAL +V  Y  Y+
Sbjct: 155 LICVMHDERVEWYEALILVSLYAVYL 180

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|281366822|ref|NP_001015261.3| CG2893, isoform F [Drosophila melanogaster] gi|281309282|gb|EAA46192.4| CG2893, isoform F [Drosophila melanogaster]

 Score =  167 bits (422), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 82/146 (56%), Positives = 104/146 (71%), Gaps = 1/146 (0%)

Query: 14  GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
           GA++   + + Y+FV LA VCD YFVP ++ +C  L +SNDVAGAT MA+ TS+PELF+N
Sbjct: 43  GAVVLHVIASLYLFVALAVVCDEYFVPAVEKICAALNMSNDVAGATFMAAATSAPELFVN 102

Query: 74  LIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
           +IGTFITEGD+G GT+VGS VFN+LAV A C  +     I LD+WPLTRDSI Y V V I
Sbjct: 103 VIGTFITEGDIGVGTIVGSAVFNILAVAACC-GIGAGMTIPLDWWPLTRDSIAYGVTVAI 161

Query: 134 LAFSLQDGKVMWYEALSMVFFYYFYI 159
           L   + D +V WYEAL +V  Y  Y+
Sbjct: 162 LICVMHDERVEWYEALILVSLYAVYL 187

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	219
FB|FBgn0040030	560	CG2893 [Drosophila melanogaste	0.662	0.258	0.513	1.6e-34
FB|FBgn0040031	444	CG12061 [Drosophila melanogast	0.662	0.326	0.428	1.8e-32
UNIPROTKB|Q8NFF2	622	SLC24A4 "Sodium/potassium/calc	0.799	0.281	0.372	3.3e-30
UNIPROTKB|F1MD60	605	SLC24A4 "Uncharacterized prote	0.666	0.241	0.428	6.4e-30
MGI|MGI:2447362	622	Slc24a4 "solute carrier family	0.666	0.234	0.421	1.5e-29
UNIPROTKB|F1Q3C2	539	SLC24A4 "Uncharacterized prote	0.666	0.270	0.414	2.2e-29
UNIPROTKB|F1SD72	555	SLC24A4 "Uncharacterized prote	0.666	0.263	0.414	2.5e-29
UNIPROTKB|F1P3N3	558	SLC24A3 "Uncharacterized prote	0.666	0.261	0.435	5.6e-29
RGD|69256	624	Slc24a3 "solute carrier family	0.666	0.233	0.442	6.9e-29
UNIPROTKB|Q9EPQ0	624	Slc24a3 "Sodium/potassium/calc	0.666	0.233	0.442	6.9e-29

FB|FBgn0040030 CG2893 [Drosophila melanogaster (taxid:7227)]

 Score = 376 (137.4 bits), Expect = 1.6e-34, P = 1.6e-34
 Identities = 75/146 (51%), Positives = 95/146 (65%)

Query:    14 GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
             GA++   + + Y+FV LA VCD YFVP ++ +C  L +SNDVAGAT MA+ TS+PELF+N
Sbjct:    61 GAVVLHVIASLYLFVALAVVCDEYFVPAVEKICAALNMSNDVAGATFMAAATSAPELFVN 120

Query:    74 LIGTFITEGDXXXXXXXXXXXFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
             +IGTFITEGD           FN+LAV A C +      I LD+WPLTRDSI Y V V I
Sbjct:   121 VIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGA-GMTIPLDWWPLTRDSIAYGVTVAI 179

Query:   134 LAFSLQDGKVMWYEALSMVFFYYFYI 159
             L   + D +V WYEAL +V  Y  Y+
Sbjct:   180 LICVMHDERVEWYEALILVSLYAVYL 205

GO:0008273 "calcium, potassium:sodium antiporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

FB|FBgn0040031 CG12061 [Drosophila melanogaster (taxid:7227)]

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 63/147 (42%), Positives = 96/147 (65%)

Query:    15 AIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINL 74
             AI+  TL++ Y+FV LA VCD Y VP ++ +C  L ++ DVAGAT +A+ TS+PELF+N 
Sbjct:    56 AIVVSTLVSMYLFVILAIVCDDYLVPAMERLCYTLRMTYDVAGATFLAASTSAPELFVNF 115

Query:    75 IGTFITEGDXXXXXXXXXXXFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLIL 134
             +GTF+T GD           FN+L +  +C +   +Q  +LD+WP+TRD+  Y++A+  L
Sbjct:   116 VGTFVTNGDIGLGTIVGSSVFNILVIAGVCGIF--TQPTKLDWWPVTRDTAWYLIAIASL 173

Query:   135 AFSLQDGKVMWYEALSMVFFYYFYIIE 161
              + L D  VMWYEA +++  Y  Y+I+
Sbjct:   174 TYVLWDSLVMWYEAFALLLLYISYVIQ 200

GO:0008273 "calcium, potassium:sodium antiporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|Q8NFF2 SLC24A4 "Sodium/potassium/calcium exchanger 4" [Homo sapiens (taxid:9606)]

 Score = 340 (124.7 bits), Expect = 3.3e-30, P = 3.3e-30
 Identities = 69/185 (37%), Positives = 107/185 (57%)

Query:    14 GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
             GA++   L   Y+F  LA VCD +FVP ++ +C++L LS DVAGAT MA+G+S+PELF +
Sbjct:    98 GAVLLHILGALYMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSTPELFAS 157

Query:    74 LIGTFITEGDXXXXXXXXXXXFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
             +IG FIT GD           FN+L +  +C L    Q +RL +W + RDS+ Y ++V++
Sbjct:   158 VIGVFITHGDVGVGTIVGSAVFNILCIIGVCGLFA-GQVVRLTWWAVCRDSVYYTISVIV 216

Query:   134 LAFSLQDGKVMWYEALSMVFFYYFYI-IEKAKIVVTSGYKIYRDEVQFYNQEDIGKSNPT 192
             L   + D +++W+E L ++  Y FYI I K  + + + + +         Q+ I   NP 
Sbjct:   217 LIVFIYDEQIVWWEGLVLIILYVFYILIMKYNVKMQAFFTV--------KQKSIANGNPV 268

Query:   193 NKAKE 197
             N   E
Sbjct:   269 NSELE 273

GO:0006813 "potassium ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0015293 "symporter activity" evidence=IEA

GO:0015297 "antiporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=TAS

GO:0006811 "ion transport" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

UNIPROTKB|F1MD60 SLC24A4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 337 (123.7 bits), Expect = 6.4e-30, P = 6.4e-30
 Identities = 63/147 (42%), Positives = 94/147 (63%)

Query:    14 GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
             GA++   L   Y+F  LA VCD +FVP ++ +C+KL LS DVAGAT MA+G+S+PELF +
Sbjct:    81 GAVLLHILGALYMFYALAIVCDDFFVPSLEKICEKLHLSEDVAGATFMAAGSSTPELFAS 140

Query:    74 LIGTFITEGDXXXXXXXXXXXFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
             +IG FIT GD           FN+L +  +C L    Q +RL +W + RDS+ Y ++V++
Sbjct:   141 VIGVFITHGDVGVGTIVGSAVFNILCIIGVCGLFA-GQVVRLTWWAVCRDSVYYTLSVIV 199

Query:   134 LAFSLQDGKVMWYEALSMVFFYYFYII 160
             L   + D ++MW+E L ++  Y FYI+
Sbjct:   200 LIAFIYDEEIMWWEGLVLIVLYVFYIL 226

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

MGI|MGI:2447362 Slc24a4 "solute carrier family 24 (sodium/potassium/calcium exchanger), member 4" [Mus musculus (taxid:10090)]

 Score = 334 (122.6 bits), Expect = 1.5e-29, P = 1.5e-29
 Identities = 62/147 (42%), Positives = 94/147 (63%)

Query:    14 GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
             GA++   L   Y+F  LA VCD +FVP ++ +C+KL LS DVAGAT MA+G+S+PELF +
Sbjct:    98 GAVLLHILGALYMFYALAIVCDDFFVPSLEKICEKLHLSEDVAGATFMAAGSSTPELFAS 157

Query:    74 LIGTFITEGDXXXXXXXXXXXFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
             +IG FIT GD           FN+L +  +C L    Q +RL +W + RDS+ Y ++V++
Sbjct:   158 VIGVFITHGDVGVGTIVGSAVFNILCIIGVCGLFA-GQVVRLTWWAVCRDSVYYTLSVIV 216

Query:   134 LAFSLQDGKVMWYEALSMVFFYYFYII 160
             L   + D +++W+E L ++  Y FYI+
Sbjct:   217 LIAFIYDEEIVWWEGLVLIILYVFYIL 243

GO:0005432 "calcium:sodium antiporter activity" evidence=ISA

GO:0005886 "plasma membrane" evidence=ISO

GO:0005887 "integral to plasma membrane" evidence=IC

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0008273 "calcium, potassium:sodium antiporter activity" evidence=ISO;ISA

GO:0015293 "symporter activity" evidence=IEA

GO:0015297 "antiporter activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0035725 "sodium ion transmembrane transport" evidence=ISA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=ISO;ISA

GO:0071805 "potassium ion transmembrane transport" evidence=ISA

UNIPROTKB|F1Q3C2 SLC24A4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 330 (121.2 bits), Expect = 2.2e-29, P = 2.2e-29
 Identities = 61/147 (41%), Positives = 94/147 (63%)

Query:    14 GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
             GA++   L   Y+F  LA VCD +FVP ++ +C++L LS DVAGAT MA+G+S+PELF +
Sbjct:    34 GAVLLHILGALYMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSTPELFAS 93

Query:    74 LIGTFITEGDXXXXXXXXXXXFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
             +IG FIT GD           FN+L +  +C L    Q +RL +W + RDS+ Y ++V++
Sbjct:    94 VIGVFITHGDVGVGTIVGSAVFNILCIIGVCGLFA-GQVVRLTWWAVCRDSVYYTLSVIV 152

Query:   134 LAFSLQDGKVMWYEALSMVFFYYFYII 160
             L   + D +++W+E L ++  Y FYI+
Sbjct:   153 LIAFIYDEEIVWWEGLVLIVLYVFYIL 179

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|F1SD72 SLC24A4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 330 (121.2 bits), Expect = 2.5e-29, P = 2.5e-29
 Identities = 61/147 (41%), Positives = 93/147 (63%)

Query:    14 GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
             GA++   L   Y+F  LA VCD +FVP ++ +C+KL LS DVAGAT MA+G+S+PELF +
Sbjct:    34 GAVLLHVLGALYMFYALAIVCDDFFVPSLEKICEKLHLSEDVAGATFMAAGSSTPELFAS 93

Query:    74 LIGTFITEGDXXXXXXXXXXXFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
             +IG FIT GD           FN+L +  +C L    Q + L +W + RDS+ Y ++V++
Sbjct:    94 VIGVFITHGDVGVGTIVGSAVFNILCIIGVCGLFA-GQVVHLTWWAVCRDSVYYTLSVIV 152

Query:   134 LAFSLQDGKVMWYEALSMVFFYYFYII 160
             L   + D +++W+E L ++  Y FYI+
Sbjct:   153 LIAFIYDEEIVWWEGLVLIILYVFYIL 179

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|F1P3N3 SLC24A3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 327 (120.2 bits), Expect = 5.6e-29, P = 5.6e-29
 Identities = 64/147 (43%), Positives = 91/147 (61%)

Query:    14 GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
             GA+I   +   Y+F  LA VCD +FVP ++ +C++L LS DVAGAT MA+G+S+PELF +
Sbjct:    18 GAVILHVICAMYMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFTS 77

Query:    74 LIGTFITEGDXXXXXXXXXXXFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
             +IG FIT+GD           FN+L +  +C L    Q + L  W L RDSI Y ++V+ 
Sbjct:    78 VIGVFITKGDVGVGTIVGSAVFNILCIIGVCGLFA-GQVVALSSWSLLRDSIYYTLSVVA 136

Query:   134 LAFSLQDGKVMWYEALSMVFFYYFYII 160
             L   + D KV W+E+L +V  Y  YI+
Sbjct:   137 LIVFIYDEKVSWWESLVLVLMYAIYIV 163

GO:0016021 "integral to membrane" evidence=IEA

GO:0008273 "calcium, potassium:sodium antiporter activity" evidence=IEA

RGD|69256 Slc24a3 "solute carrier family 24 (sodium/potassium/calcium exchanger), member 3" [Rattus norvegicus (taxid:10116)]

 Score = 328 (120.5 bits), Expect = 6.9e-29, P = 6.9e-29
 Identities = 65/147 (44%), Positives = 91/147 (61%)

Query:    14 GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
             GA++   L   Y+F  LA VCD +FVP ++ +C++L LS DVAGAT MA+G+S+PELF +
Sbjct:    89 GAVVLHVLCAMYMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFTS 148

Query:    74 LIGTFITEGDXXXXXXXXXXXFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
             +IG FIT+GD           FN+L +  +C L    Q + L  W L RDSI Y ++V+ 
Sbjct:   149 VIGVFITKGDVGVGTIVGSAVFNILCIIGVCGLFA-GQVVALSSWCLLRDSIYYTLSVVA 207

Query:   134 LAFSLQDGKVMWYEALSMVFFYYFYII 160
             L   + D KV W+E+L +V  Y  YII
Sbjct:   208 LIVFIYDEKVSWWESLVLVLMYLIYII 234

GO:0005886 "plasma membrane" evidence=IDA

GO:0006812 "cation transport" evidence=IDA

GO:0006874 "cellular calcium ion homeostasis" evidence=IEP;NAS

GO:0008273 "calcium, potassium:sodium antiporter activity" evidence=ISO;IMP;IDA

GO:0015293 "symporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0035725 "sodium ion transmembrane transport" evidence=ISO

GO:0055085 "transmembrane transport" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=ISO;IMP

GO:0071805 "potassium ion transmembrane transport" evidence=ISO

UNIPROTKB|Q9EPQ0 Slc24a3 "Sodium/potassium/calcium exchanger 3" [Rattus norvegicus (taxid:10116)]

 Score = 328 (120.5 bits), Expect = 6.9e-29, P = 6.9e-29
 Identities = 65/147 (44%), Positives = 91/147 (61%)

Query:    14 GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFIN 73
             GA++   L   Y+F  LA VCD +FVP ++ +C++L LS DVAGAT MA+G+S+PELF +
Sbjct:    89 GAVVLHVLCAMYMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFTS 148

Query:    74 LIGTFITEGDXXXXXXXXXXXFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLI 133
             +IG FIT+GD           FN+L +  +C L    Q + L  W L RDSI Y ++V+ 
Sbjct:   149 VIGVFITKGDVGVGTIVGSAVFNILCIIGVCGLFA-GQVVALSSWCLLRDSIYYTLSVVA 207

Query:   134 LAFSLQDGKVMWYEALSMVFFYYFYII 160
             L   + D KV W+E+L +V  Y  YII
Sbjct:   208 LIVFIYDEKVSWWESLVLVLMYLIYII 234

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	219
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	2e-40
TIGR00367	307	TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchang	6e-24
pfam01699	135	pfam01699, Na_Ca_ex, Sodium/calcium exchanger prot	3e-19
COG0530	320	COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion	7e-14
TIGR00845	928	TIGR00845, caca, sodium/calcium exchanger 1	2e-10
COG0530	320	COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion	6e-09
TIGR00367	307	TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchang	2e-08
PLN03151	650	PLN03151, PLN03151, cation/calcium exchanger; Prov	9e-06
PRK10734	325	PRK10734, PRK10734, putative calcium/sodium:proton	1e-05
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	6e-04

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score =  146 bits (370), Expect = 2e-40
 Identities = 63/135 (46%), Positives = 90/135 (66%), Gaps = 1/135 (0%)

Query: 25  YIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDV 84
           Y+FV LA VCD YFVP + ++  KL++S DVAGAT MA+G S+PELF +LIG FI+  +V
Sbjct: 466 YVFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFISHSNV 525

Query: 85  GTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVM 144
           G GT+VGS VFN+L V   C L  R + + L +WPL RD   Y++ +++L     D  + 
Sbjct: 526 GIGTIVGSAVFNILFVIGTCALFSR-EILNLTWWPLFRDVSFYILDLMMLILFFLDSLIA 584

Query: 145 WYEALSMVFFYYFYI 159
           W+E+L ++  Y  Y+
Sbjct: 585 WWESLLLLLAYALYV 599

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|232943 TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchanger related-protein

 Score = 96.2 bits (240), Expect = 6e-24
 Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 6/150 (4%)

Query: 25  YIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDV 84
            + + L       FV     + + L +S  + G T++A GTS PELF +LI + + + D+
Sbjct: 8   ILGLILLIYGADLFVKSSVRIARHLGISPLIIGVTVVAIGTSLPELFTSLIASLMGQPDI 67

Query: 85  GTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVM 144
           G G V+GS +FN+L +  L  +      I +D   L RD + Y++  ++L F   DG++ 
Sbjct: 68  GVGNVIGSNIFNILLILGLSAIF---SPIIVDKDWLRRDILFYLLVSILLLFFGLDGQIS 124

Query: 145 WYEALSMVFFYYFY---IIEKAKIVVTSGY 171
             + + ++  Y  Y   +++  + V    Y
Sbjct: 125 RIDGVVLLILYIVYLLFLVKNERWVKYDTY 154

This model models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of > 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat [Unknown function, General]. Length = 307

>gnl|CDD|216653 pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein

 Score = 79.9 bits (198), Expect = 3e-19
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 3/134 (2%)

Query: 29  FLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGT 88
            L  +     V   + + + L +S  V G TL+A GTS PELF ++I       D+  G 
Sbjct: 1   LLIILLADLLVDSAESIAEVLGISPTVIGLTLLALGTSLPELFSSIIAALKGNADLALGN 60

Query: 89  VVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILA--FSLQDGKVMWY 146
           V+GS +FN+L V  L   L     +++   PL+ D    ++ +L+L     L DG++  +
Sbjct: 61  VIGSNLFNILLVLGLS-ALISPIGLKVLVSPLSLDFSFLLLVLLLLLLFLLLSDGRISRF 119

Query: 147 EALSMVFFYYFYII 160
           E L ++  Y  Y++
Sbjct: 120 EGLVLLLLYIVYLV 133

This is a family of sodium/calcium exchanger integral membrane proteins. This family covers the integral membrane regions of the proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells. Ca2+ is moved into or out of the cytosol depending on Na+ concentration. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3. Length = 135

>gnl|CDD|223604 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]

 Score = 68.8 bits (169), Expect = 7e-14
 Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 4/143 (2%)

Query: 19  PTLITGYIFVFLATVCDA-YFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGT 77
             LI   I   +  V  A   V     + ++  +S  + G T++A GTS PEL ++L+  
Sbjct: 9   LLLILLLIAGLILLVKGADLLVDAASAISRRFGISELIIGLTIVAFGTSLPELAVSLVAA 68

Query: 78  FITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFS 137
                D+  G V+GS +FN+L +  L  L+     +++D   L R+    ++A LIL   
Sbjct: 69  LSGNPDIAVGNVLGSNIFNILLILGLAALIAP---LKVDSDVLRREIPFLLLATLILLLV 125

Query: 138 LQDGKVMWYEALSMVFFYYFYII 160
           L DG +   + + ++  Y  Y+ 
Sbjct: 126 LLDGHLSRLDGIVLLLLYVLYLY 148

Length = 320

>gnl|CDD|233149 TIGR00845, caca, sodium/calcium exchanger 1

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 13/134 (9%)

Query: 55  VAGATLMASGTSSPELFINLI---GTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQ 111
           V+  TLMA G+S+PE+ +++I   G     GD+G  T+VGS  FNM  + A+C+ +    
Sbjct: 131 VSNLTLMALGSSAPEILLSVIEVCGHNFEAGDLGPSTIVGSAAFNMFIIIAICVYVIPDG 190

Query: 112 KIR----LDYWPLTRD-SII-YMVAVLILAFSLQDGKVMWYEALSMVFF----YYFYIIE 161
           + R    L  + +T   S+  Y+   LILA        +W   L+  FF     + ++ +
Sbjct: 191 ETRKIKHLRVFFVTAAWSVFAYVWLYLILAVFSPGVVEVWEGLLTFFFFPLCVVFAWVAD 250

Query: 162 KAKIVVTSGYKIYR 175
           +  +     YK YR
Sbjct: 251 RRLLFYKYVYKRYR 264

The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family [Transport and binding proteins, Other]. Length = 928

>gnl|CDD|223604 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]

 Score = 54.5 bits (132), Expect = 6e-09
 Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 1/124 (0%)

Query: 37  YFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFN 96
             V     + +   +S  + G T++A GTS PEL ++++     E D+  G V+GS +FN
Sbjct: 193 LLVDGAVEIAEIFGISELIIGLTIVAIGTSLPELVVSIVAARKGEDDIAVGNVIGSNIFN 252

Query: 97  MLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYY 156
           +L V  +  L+            +    +I +  +L+L  + +  ++   E L ++  Y 
Sbjct: 253 ILIVLGISALIGPITVEPSAL-LVDAPVLILVTLLLLLFLARRRRRIGRKEGLLLLGLYI 311

Query: 157 FYII 160
            Y+ 
Sbjct: 312 VYVA 315

Length = 320

>gnl|CDD|232943 TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchanger related-protein

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 4/111 (3%)

Query: 49  LELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLC 108
           L +S  + G TL+A GTS PEL ++L       GD+  G V+GS +FN+L    +  L  
Sbjct: 200 LGISEKIIGLTLLAIGTSLPELVVSLAAARKGLGDIAVGNVIGSNIFNILVGLGVPSLFM 259

Query: 109 RSQKIRLDYWPLTRD-SIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFY 158
               I ++      D  ++ +V +L++ F     K+  +E + ++  Y  Y
Sbjct: 260 P---IPVEPLAYNLDAPVMVIVTLLLMLFFKTSMKLGRWEGILLLALYIAY 307

This model models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of > 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat [Unknown function, General]. Length = 307

>gnl|CDD|215604 PLN03151, PLN03151, cation/calcium exchanger; Provisional

 Score = 45.5 bits (108), Expect = 9e-06
 Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 26  IFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFI--TEGD 83
           +F  L      YF   ++ + + L L   VAG TL+  G  +P++F + I  F+    G+
Sbjct: 150 LFYLLGNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFAS-IAAFVGKDAGE 208

Query: 84  VGTGTVVGSGVFNMLAVPALCILLCRSQK-IRLDYWPLTRDSIIYMVAVLILAFSLQDGK 142
           VG  +V+G  VF +  V    + LC + K +++D     RD   ++  ++ L   L  GK
Sbjct: 209 VGLNSVLGGAVF-VTCVVVGIVSLCVADKEVQIDKRCFIRDLCFFLFTLVSLLVILMVGK 267

Query: 143 VMWYEALSMVFFYYFY 158
           V    A++ V  Y  Y
Sbjct: 268 VTVGGAIAFVSIYVVY 283

Length = 650

>gnl|CDD|182684 PRK10734, PRK10734, putative calcium/sodium:proton antiporter; Provisional

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 17/121 (14%)

Query: 13  VGAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFI 72
           +  II P  +   + +  ATV   YF            +S    G T++A GTS PEL  
Sbjct: 181 IALIIMP--MATRMVIDNATVLANYF-----------AISELTIGLTVIAIGTSLPELAT 227

Query: 73  NLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRS----QKIRLDYWPLTRDSIIYM 128
            + G    E D+  G ++GS +FN++ V  L  L+            DYW +   S+I+ 
Sbjct: 228 AIAGARKGENDIAVGNIIGSNIFNIVIVLGLPALISPGEINPLAFSRDYWVMLLVSVIFA 287

Query: 129 V 129
           +
Sbjct: 288 L 288

Length = 325

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score = 40.0 bits (93), Expect = 6e-04
 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 15/99 (15%)

Query: 8    FPFGFVGAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSS 67
            F   F+G+I++  + + Y+ V+ A             V + + +S ++ G T++A+GTS 
Sbjct: 934  FVITFLGSIMWIAMFS-YLMVWWAHQ-----------VGETIGISEEIMGLTILAAGTSI 981

Query: 68   PELFINLIGTFITEGDVGTGTVVGSGVFNM---LAVPAL 103
            P+L  ++I      GD+   + VGS +F++   L VP L
Sbjct: 982  PDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPVPWL 1020

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	219
KOG1307|consensus	588		100.0
TIGR00927	1096	2A1904 K+-dependent Na+/Ca+ exchanger.	99.98
PLN03151	650	cation/calcium exchanger; Provisional	99.95
TIGR00367	307	K+-dependent Na+/Ca+ exchanger related-protein. Th	99.94
PRK10734	325	putative calcium/sodium:proton antiporter; Provisi	99.94
COG0530	320	ECM27 Ca2+/Na+ antiporter [Inorganic ion transport	99.92
PRK10734	325	putative calcium/sodium:proton antiporter; Provisi	99.89
COG0530	320	ECM27 Ca2+/Na+ antiporter [Inorganic ion transport	99.89
TIGR00845	928	caca sodium/calcium exchanger 1. This model is spe	99.88
TIGR00367	307	K+-dependent Na+/Ca+ exchanger related-protein. Th	99.87
TIGR00378	349	cax calcium/proton exchanger (cax).	99.86
PF01699	140	Na_Ca_ex: Sodium/calcium exchanger protein; InterP	99.86
TIGR00846	365	caca2 calcium/proton exchanger. This model is gene	99.84
TIGR00846	365	caca2 calcium/proton exchanger. This model is gene	99.82
KOG2399|consensus	605		99.79
KOG1397|consensus	441		99.77
TIGR00927	1096	2A1904 K+-dependent Na+/Ca+ exchanger.	99.76
TIGR00378	349	cax calcium/proton exchanger (cax).	99.76
KOG1307|consensus	588		99.73
TIGR00845	928	caca sodium/calcium exchanger 1. This model is spe	99.7
PLN03151	650	cation/calcium exchanger; Provisional	99.5
PRK10599	366	calcium/sodium:proton antiporter; Provisional	99.45
KOG2399|consensus	605		99.44
COG0387	368	ChaA Ca2+/H+ antiporter [Inorganic ion transport a	99.37
COG0387	368	ChaA Ca2+/H+ antiporter [Inorganic ion transport a	99.3
KOG1397|consensus	441		99.19
KOG1306|consensus	596		98.99
KOG1306|consensus	596		98.91
PRK10599	366	calcium/sodium:proton antiporter; Provisional	97.9

>KOG1307|consensus

Probab=100.00  E-value=1.4e-36  Score=274.10  Aligned_cols=162  Identities=44%  Similarity=0.831  Sum_probs=156.7

Q ss_pred             ccccCCccch-------hHHHHHHHHHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHH
Q psy11346          4 IMINFPFGFV-------GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIG   76 (219)
Q Consensus         4 ~~~~~~~~~~-------~~~~~~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a   76 (219)
                      +..+||+|.+       |++++|+.+++|+|++|+++|++||||+++.|+++++||++++|+|++|.|+|+||++++++.
T Consensus        38 ~~~~fP~DiFs~e~rr~G~VvlHv~g~iYmFvALAIVCDefFVPSL~vItEkL~iSdDVAGATFMAAGgSAPElFTSvIG  117 (588)
T KOG1307|consen   38 ALGEFPPDIFSLEQRRQGAVVLHVIGLIYMFVALAIVCDEFFVPSLDVITEKLGISDDVAGATFMAAGGSAPELFTSVIG  117 (588)
T ss_pred             ccccCCCccccHHHhhcCcEEeehhhHHHHHHHHHHHhcccccccHHHHHHHhcCcccccchhhhhccCCchHHhhhhee
Confidence            5679999999       899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhCCCceeehhhhhhhHHHHhhHhHHHHHHhcCceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHH
Q psy11346         77 TFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYY  156 (219)
Q Consensus        77 ~~~g~~~iaig~iiGS~lfn~llv~gl~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~  156 (219)
                      +.--+.|+++|+++||++||+++|+|.|.++ +++..++.+|+++||..+|.++++.|++++.|..+.|||+++|+..|+
T Consensus       118 VFIt~~dVGiGTIVGSAvFNIL~Vig~C~LF-Srqvl~LtWWPLfRD~sfY~lsl~~Li~Ff~D~~I~WwEaL~L~~~Yi  196 (588)
T KOG1307|consen  118 VFITQGDVGIGTIVGSAVFNILCVIGVCGLF-SRQVLNLTWWPLFRDVSFYTLSLIMLIYFFLDELIMWWEALALLLMYI  196 (588)
T ss_pred             EEEecCCcceeeeeehhhhhHHHHHHHHHhh-cccccccccchhhhhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999 878999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHH
Q psy11346        157 FYIIEKAKIV  166 (219)
Q Consensus       157 ~yl~~~~~~~  166 (219)
                      .|++++.+..
T Consensus       197 ~Yv~~MKfN~  206 (588)
T KOG1307|consen  197 SYVVFMKFNG  206 (588)
T ss_pred             HHheeeehhh
Confidence            9999987654

>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger

Probab=99.98  E-value=5.7e-32  Score=261.13  Aligned_cols=162  Identities=40%  Similarity=0.772  Sum_probs=150.9

Q ss_pred             ccccCCccch-------hHHHHHHHHHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHH
Q psy11346          4 IMINFPFGFV-------GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIG   76 (219)
Q Consensus         4 ~~~~~~~~~~-------~~~~~~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a   76 (219)
                      ++++||+|++       +++++++++++|+|++++++|++||+++++.|++++++|+.++|+|++|+|||+||+++++++
T Consensus       438 p~~efP~d~fti~~R~~g~VVL~l~~liy~Fv~LaIv~dDyFVPSLe~IAekLgLSE~VAGaTLLAfGTSAPELfTSLiA  517 (1096)
T TIGR00927       438 PKAEYPPDLFSVEERRQGWVVLHIFGMMYVFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIG  517 (1096)
T ss_pred             chhhCCcccccccccccceeHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCcHhhhheeeeeeecCcHHHHHHHHH
Confidence            6789999997       688999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhCCCceeehhhhhhhHHHHhhHhHHHHHHhcCceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHH
Q psy11346         77 TFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYY  156 (219)
Q Consensus        77 ~~~g~~~iaig~iiGS~lfn~llv~gl~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~  156 (219)
                      ++.++.++++||++||++||+++++|+|+++ .+..++++++.+.||..+++++..++..++.++++++++|++|+++|+
T Consensus       518 v~~g~sDIGVGNIVGSnIFNILLVLGl~aLi-s~~~l~Ld~~~L~RDllFyILAv~lLilf~lDG~Itr~EgIILLlLYi  596 (1096)
T TIGR00927       518 VFISHSNVGIGTIVGSAVFNILFVIGTCALF-SREILNLTWWPLFRDVSFYILDLMMLILFFLDSLIAWWESLLLLLAYA  596 (1096)
T ss_pred             HHcCCCcceehhhHhHHHHHHHHHHhhheee-ccccccccccceehhHHHHHHHHHHHHHHHhCCeEcHHHHHHHHHHHH
Confidence            9999999999999999999999999999988 544567778889999999999988877778899999999999999999


Q ss_pred             HHHHHHHHHH
Q psy11346        157 FYIIEKAKIV  166 (219)
Q Consensus       157 ~yl~~~~~~~  166 (219)
                      +|+++++...
T Consensus       597 iYVvvm~~n~  606 (1096)
T TIGR00927       597 LYVFTMKWNK  606 (1096)
T ss_pred             HHHHHHHHhH
Confidence            9999887654

>PLN03151 cation/calcium exchanger; Provisional

Probab=99.95  E-value=8e-27  Score=223.24  Aligned_cols=151  Identities=24%  Similarity=0.370  Sum_probs=137.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhh-CCCceeehhhhhhhH
Q psy11346         16 IIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFI-TEGDVGTGTVVGSGV   94 (219)
Q Consensus        16 ~~~~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~-g~~~iaig~iiGS~l   94 (219)
                      +++..++++++|+.+...+++||+|+++.+++++++||+++|+|++|+|||+||+++++.++.. ++.++++|+++||++
T Consensus       140 ~~~l~~~l~~lF~~L~~ta~dyF~p~l~~Is~~L~lse~vAGvTlLAfGNsaPDlf~si~a~~~~~~~~l~ig~ilGs~l  219 (650)
T PLN03151        140 YAVLGVWLVALFYLLGNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFASIAAFVGKDAGEVGLNSVLGGAV  219 (650)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCCHHHHHHHHHHHhCCcHHHHHHHHHHHcCCCCceeeehhhhHHH
Confidence            3445689999999999999999999999999999999999999999999999999999998764 788999999999999


Q ss_pred             HHHhhHhHHHHHHhcCceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHH
Q psy11346         95 FNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEKAKIV  166 (219)
Q Consensus        95 fn~llv~gl~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~~yl~~~~~~~  166 (219)
                      ||++++.|++.++...+|++++++.+.||..+++++..++..+..+|++++++|++++.+|++|+++....+
T Consensus       220 f~~~vV~G~v~l~~~~~pf~v~~~~f~RD~~F~lla~~~l~~~l~~g~v~~~eai~ll~lY~~Yv~vv~~~~  291 (650)
T PLN03151        220 FVTCVVVGIVSLCVADKEVQIDKRCFIRDLCFFLFTLVSLLVILMVGKVTVGGAIAFVSIYVVYAFLVAANE  291 (650)
T ss_pred             HHHHHHHHHHHHhccCCceeecchhHHHhHHHHHHHHHHHHHHHHcCeEhHHHHHHHHHHHHHHHHHHHhhH
Confidence            999999999998833468999999999999999999888877788999999999999999999998776433

>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein

Probab=99.94  E-value=4.3e-26  Score=202.07  Aligned_cols=145  Identities=30%  Similarity=0.459  Sum_probs=134.7

Q ss_pred             HHHHHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHh
Q psy11346         19 PTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNML   98 (219)
Q Consensus        19 ~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~l   98 (219)
                      |++..++++..+...++++|+++++.+++++|+|+.+.|+|++|+|||+||+++++.++++|++++++||++|||+||++
T Consensus         2 ~~~~~~~~~~~~~~~~a~~lv~~~~~ia~~lgl~~~v~G~tlla~gtslPEl~~si~a~~~g~~~la~g~ilGS~l~n~l   81 (307)
T TIGR00367         2 ILIGYLILGLILLIYGADLFVKSSVRIARKLGISPLIIGVTVVAIGTSLPELFTSLIASLIGQPDIGVGNVIGSNIFNIL   81 (307)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHhcCCCCeehhhhhhHHHHHHH
Confidence            56777888889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHhHHHHHHhcCceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHH
Q psy11346         99 AVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEKAKIV  166 (219)
Q Consensus        99 lv~gl~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~~yl~~~~~~~  166 (219)
                      +++|++.++   ++++.+++.+.||..+++++...+..+..+++++|++|++|++.|+.|+.++.+.+
T Consensus        82 ~i~g~~~l~---~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~g~i~~~~gi~ll~~Yv~yl~~~~~~~  146 (307)
T TIGR00367        82 LILGLSAIF---SPIIVDTDWLRRDFSFYLLVSILLLFFGLDGPISRLDGVVLLFLYVVYLLFLVKVE  146 (307)
T ss_pred             HHHHHHHhh---cceeechHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999   57888888899999999888777777778999999999999999999999988654

This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.

>PRK10734 putative calcium/sodium:proton antiporter; Provisional

Probab=99.94  E-value=7.7e-26  Score=201.86  Aligned_cols=138  Identities=20%  Similarity=0.373  Sum_probs=121.7

Q ss_pred             HHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHH
Q psy11346         26 IFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCI  105 (219)
Q Consensus        26 lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~  105 (219)
                      +-..+..+++++|+++.+.+++++|+|+.+.|+|++|+|||+||+++++.|+++|++|+++||++|||+||+++++|++.
T Consensus        10 ~gl~~l~~ga~~lv~~~~~ia~~lgis~~viG~tiva~gTSlPEl~vsv~A~~~g~~~ia~GnilGSni~ni~lilg~~~   89 (325)
T PRK10734         10 IGLLLLVYGADRLVFAASILCRTFGIPPLIIGMTVVGIGTSLPEIIVSVAASLHGQRDLAVGTALGSNITNILLILGLAA   89 (325)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcchhHHHHHHHHHHcCCCcchhhhhhhHHHHHHHHHHHHHH
Confidence            33456667999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHH
Q psy11346        106 LLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEKAKIV  166 (219)
Q Consensus       106 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~~yl~~~~~~~  166 (219)
                      ++   +|++++++.+.++..+++.+.+++..+..+++++|++|++++.+|+.|+.+++|.+
T Consensus        90 l~---~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~l~~~~g~~ll~~~~~yl~~~~~~~  147 (325)
T PRK10734         90 LI---RPFTVHSDVLRRELPLMLLVSVLAGSVLYDGQLSRSDGIFLLLLAVLWLLFIVKIA  147 (325)
T ss_pred             Hh---CCcccChHHHHHHHHHHHHHHHHHHHHHHCCcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            99   66777766677787766655554444567899999999999999999999988755

>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]

Probab=99.92  E-value=4.1e-24  Score=190.20  Aligned_cols=148  Identities=24%  Similarity=0.437  Sum_probs=137.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHH
Q psy11346         16 IIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVF   95 (219)
Q Consensus        16 ~~~~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lf   95 (219)
                      ..+..+..+.++..+.+.++|+|+++++.+++++|+|+.+.|+|++|+|||+||+.+++.++.+|++|+++||++|||++
T Consensus         7 ~~~~~~~~~i~~l~llv~~ad~lv~~a~~Is~~~gi~~~~iG~tiva~gTslPE~~vs~~a~l~g~~~iavGnvlGSni~   86 (320)
T COG0530           7 MLLLLILLLIAGLILLVKGADLLVDAASAISRRFGISELIIGLTIVAFGTSLPELAVSLVAALSGNPDIAVGNVLGSNIF   86 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccChHHHHHHHHHHcCCCCeeeehhhhHHHH
Confidence            34555677778888999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhHhHHHHHHhcCceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHH
Q psy11346         96 NMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEKAKIV  166 (219)
Q Consensus        96 n~llv~gl~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~~yl~~~~~~~  166 (219)
                      |+++++|+++++   ++.+.++..+.||..+++++...+..+..+++++|++|+.++.+|+.|+.+.+|..
T Consensus        87 ni~li~gl~ali---~~~~~~~~~~~r~~~f~ll~~~~~~~~~~~~~~~~~~gi~ll~l~~~yl~~~~~~~  154 (320)
T COG0530          87 NILLILGLAALI---APLKVDSDVLRREIPFLLLATLILLLVLLDGHLSRLDGIVLLLLYVLYLYYLLKLS  154 (320)
T ss_pred             HHHHHHHHHHHH---hhhHhhhhHHHHhhHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999   67777777899999999999998888999999999999999999999999988643

>PRK10734 putative calcium/sodium:proton antiporter; Provisional

Probab=99.89  E-value=2.1e-22  Score=179.77  Aligned_cols=135  Identities=18%  Similarity=0.296  Sum_probs=114.3

Q ss_pred             HHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHHH
Q psy11346         27 FVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCIL  106 (219)
Q Consensus        27 f~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~~  106 (219)
                      ...+...++++++++.+.+++.+|+||.+.|+|++|+|||+||+++++.++++|+.|+++||++|||+||+++++|++++
T Consensus       182 g~~~l~~gs~~lv~~~~~ia~~lgis~~~iG~tiva~gtslPE~~~sv~a~~~g~~~~avgniiGsnifni~~~lg~~~l  261 (325)
T PRK10734        182 ALIIMPMATRMVIDNATVLANYFAISELTIGLTVIAIGTSLPELATAIAGARKGENDIAVGNIIGSNIFNIVIVLGLPAL  261 (325)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHhccHHHHHHHHHHHHcCCCchHHHHHHhHHHHHHHHHHHHHHh
Confidence            33455578999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCceeEecchhHHHHHHHHHHHHHHH-HHHH-hCCcccHHHHHHHHHHHHHHHHHHHH
Q psy11346        107 LCRSQKIRLDYWPLTRDSIIYMVAVLIL-AFSL-QDGKVMWYEALSMVFFYYFYIIEKAK  164 (219)
Q Consensus       107 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l-~~~~-~~g~is~~~gi~Ll~~Y~~yl~~~~~  164 (219)
                      +   .+..+......+|...+...++++ .... .+++++|++|++|+.+|+.|+...++
T Consensus       262 ~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~G~~Ll~~Y~~y~~~l~~  318 (325)
T PRK10734        262 I---SPGEINPLAFSRDYWVMLLVSVIFALLCWRRKRRIGRGAGALLLGGFIVWLAMLYW  318 (325)
T ss_pred             h---ccccccchhHHHHHHHHHHHHHHHHHHHHHcCCccChHHHHHHHHHHHHHHHHHHh
Confidence            9   555555556677776554443333 2233 56789999999999999999887664

>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]

Probab=99.89  E-value=5.6e-22  Score=176.51  Aligned_cols=138  Identities=25%  Similarity=0.361  Sum_probs=124.0

Q ss_pred             HHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhH
Q psy11346         23 TGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPA  102 (219)
Q Consensus        23 ~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~g  102 (219)
                      .+.....+...++++++++...+|+.+|+||.+.|+|+.|+|||+||+++++.++|+|+.|+++||++|||+||+++++|
T Consensus       179 ~~~~~~~~l~~g~~llv~~~~~iA~~~gi~e~~igltivaigTSlPElv~si~a~rkg~~~iavGnviGSni~n~~~~lG  258 (320)
T COG0530         179 VLVIGLILLVVGSELLVDGAVEIAEIFGISELIIGLTIVAIGTSLPELVVSIVAARKGEDDIAVGNVIGSNIFNILIVLG  258 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHcccHHHHHHHHHHHcCCCCeEEeeecchHHHHHHHHHh
Confidence            33344556677899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCceeEecchhHHHHHHHHHHHHHHHHHH--HhCCcccHHHHHHHHHHHHHHHHHHH
Q psy11346        103 LCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFS--LQDGKVMWYEALSMVFFYYFYIIEKA  163 (219)
Q Consensus       103 l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~--~~~g~is~~~gi~Ll~~Y~~yl~~~~  163 (219)
                      +..++   +|.+..+..+.+|...++..++++...  ..+++++|++|..+++.|+.|+.+..
T Consensus       259 i~~~~---~~~~~~~~~~~~~~~vmi~~~l~l~l~~~~~~~~i~r~~g~~ll~~Y~~~~~~~~  318 (320)
T COG0530         259 ISALI---GPITVEPSALLVDAPVLILVTLLLLLFLARRRRRIGRKEGLLLLGLYIVYVALLI  318 (320)
T ss_pred             HHHhc---cccccCchhHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHh
Confidence            99999   777777778899999888887766555  57889999999999999999988754

>TIGR00845 caca sodium/calcium exchanger 1

Probab=99.88  E-value=5e-23  Score=201.27  Aligned_cols=167  Identities=23%  Similarity=0.377  Sum_probs=131.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhhcccHHHHHHHhC------------------CChhhhHHHHHHhcCChhHHHHHHH
Q psy11346         14 GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLE------------------LSNDVAGATLMASGTSSPELFINLI   75 (219)
Q Consensus        14 ~~~~~~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lg------------------is~~v~G~tlla~gts~PEl~~si~   75 (219)
                      ..-++|+++++|||+++.++|++|| +++|.|+++.+                  ||++++|+|++|+|||+||++++++
T Consensus        73 ~r~~~~~~~l~y~F~~~~i~ad~f~-~sie~i~~~~~~v~~~~~~ge~~~~~~ri~~~tvag~t~~A~gssaPe~~~s~~  151 (928)
T TIGR00845        73 ARATVYFVAMVYMFLGVSIIADRFM-ASIEVITSQEKEITIKKPNGETTVTTVRIWNETVSNLTLMALGSSAPEILLSVI  151 (928)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhccceeeeecCCCcceeeEeeeCCcccccceeeeccCCchHHHHHHH
Confidence            4667899999999999999999876 99999999644                  7999999999999999999999999


Q ss_pred             HHhhCC---CceeehhhhhhhHHHHhhHhHHHHHHhc-CceeEecc-hhHHHHHHHHHHHHHHHH---HHHhCCcccHHH
Q psy11346         76 GTFITE---GDVGTGTVVGSGVFNMLAVPALCILLCR-SQKIRLDY-WPLTRDSIIYMVAVLILA---FSLQDGKVMWYE  147 (219)
Q Consensus        76 a~~~g~---~~iaig~iiGS~lfn~llv~gl~~~~~~-~~~~~~~~-~~~~~d~~~~~~~~~~l~---~~~~~g~is~~~  147 (219)
                      ++..++   .++++|+++||++||+++|.|+|.++.. |..-++++ +.+.....+-+.+.+++.   .+..+|.+..||
T Consensus       152 ~~~~~~~~~g~lg~gtivGsa~Fn~~vi~~~~~~~~p~g~~~~i~~l~Vf~vTa~wSifAYiWl~lil~v~sp~vv~vwE  231 (928)
T TIGR00845       152 EVCGHNFEAGDLGPSTIVGSAAFNMFIIIAICVYVIPDGETRKIKHLRVFFVTAAWSVFAYVWLYLILAVFSPGVVEVWE  231 (928)
T ss_pred             HHhccCCccccccccceehhHHHHHHhhheeEEEeccCccceeeeeeeEEEEeeeHHHHHHHHHHhhheeeCCcHHHHHH
Confidence            987654   5999999999999999999999998743 22222222 122222233333334433   345799999999


Q ss_pred             HHHHHHHHHHHHHHHHHH-----HHhhhchhhhhhhhcc
Q psy11346        148 ALSMVFFYYFYIIEKAKI-----VVTSGYKIYRDEVQFY  181 (219)
Q Consensus       148 gi~Ll~~Y~~yl~~~~~~-----~~~~~~~~~r~~~~~~  181 (219)
                      |++.+++|.++++..+-.     .+||++||+|..+++.
T Consensus       232 ~~lTl~ffp~~V~~A~~aD~~l~~~k~~~k~yr~~k~~~  270 (928)
T TIGR00845       232 GLLTFFFFPLCVVFAWVADRRLLFYKYVYKRYRAGKQRG  270 (928)
T ss_pred             HHHHHHHHHHHHHHHHHHhcchhhhhhccccccccccCc
Confidence            999999999999887643     3678899999887753

This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family

>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein

Probab=99.87  E-value=2.2e-21  Score=172.00  Aligned_cols=134  Identities=24%  Similarity=0.331  Sum_probs=117.6

Q ss_pred             HHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHh
Q psy11346         22 ITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVP  101 (219)
Q Consensus        22 ~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~  101 (219)
                      ..+.+..++...++++++++++.+++.+|+|+.+.|+|++|+|||+||+++++.++++|+.|+++||++|||+||.++++
T Consensus       173 ~~~~~~~~~i~~~s~~~v~~~~~i~~~lgi~~~~~g~tl~a~~ts~PE~~~~i~a~~~g~~~~avg~~iGs~i~~~~~~~  252 (307)
T TIGR00367       173 VLLIIGLTGLVVGSRLLVDGAVQIAEIFGISEKIIGLTLLAIGTSLPELVVSVAAARKGLGDIAVGNVIGSNIFNILVGL  252 (307)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHHcCCCchHHHHHhhhHHHHHHHHH
Confidence            34445556667789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCceeEecchhHHHHHHHHHHHHHHH-HHHHhCCcccHHHHHHHHHHHHHH
Q psy11346        102 ALCILLCRSQKIRLDYWPLTRDSIIYMVAVLIL-AFSLQDGKVMWYEALSMVFFYYFY  158 (219)
Q Consensus       102 gl~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l-~~~~~~g~is~~~gi~Ll~~Y~~y  158 (219)
                      |++.++   .+++++++.+.||..+++...+++ .....+++++|++|++|+.+|+.|
T Consensus       253 g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~l~~~Y~~y  307 (307)
T TIGR00367       253 GVPSLF---YPIPVEPLAYSLDAPVMVIVTLVLMLVFKTSMKLGRWEGFLLLALYIAY  307 (307)
T ss_pred             HHHHHh---cccccchhHHHHHHHHHHHHHHHHHHHHHhcCeehHHHHHHHHHHHHhC
Confidence            999999   567777778889988776655444 334568999999999999999886

This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.

>TIGR00378 cax calcium/proton exchanger (cax)

Probab=99.86  E-value=3.9e-21  Score=173.16  Aligned_cols=129  Identities=16%  Similarity=0.218  Sum_probs=106.7

Q ss_pred             HhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHHHHhcCce
Q psy11346         33 VCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQK  112 (219)
Q Consensus        33 ~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~~~~~~~~  112 (219)
                      -.+++++++.+.+++++|  +.+.|+++.++|| +||+++++.|+++|++|+++||++|||++|+++++|+|+++   ++
T Consensus        31 pla~~l~~~~~~lA~~~g--~~vggl~~~~~gt-~pEL~vsi~A~~~g~~~i~~gnivGS~i~NllLilGls~li---gg  104 (349)
T TIGR00378        31 PLAAIMGNATEELADKAG--PTIGGLLNATFGN-AVELIVSIIALKEGLVRIVQASLTGSLLGNLLLVLGLCFFF---GG  104 (349)
T ss_pred             HHHHHHHHHHHHHHHHcC--chHHHHHHHhhcc-HHHHHHHHHHHHcCChhhhHHHHHHHHHHhHHHHHHHHHHH---hc
Confidence            357899999999999999  8999999999999 99999999999999999999999999999999999999998   45


Q ss_pred             eEecchhHHHH-----HHHHHHHHHHHHHH--H---h----CC---cccHHHHHHHHHHHHHHHHHHHHHHH
Q psy11346        113 IRLDYWPLTRD-----SIIYMVAVLILAFS--L---Q----DG---KVMWYEALSMVFFYYFYIIEKAKIVV  167 (219)
Q Consensus       113 ~~~~~~~~~~d-----~~~~~~~~~~l~~~--~---~----~g---~is~~~gi~Ll~~Y~~yl~~~~~~~~  167 (219)
                      .+.+++.+.++     ..++.++.+.+..+  .   .    ++   .++|++|++++++|+.|+.++.|+++
T Consensus       105 l~~~~q~~~~~~a~~~~~ll~la~~~l~lp~~~~~~~~~~~~~~~~~ls~~~aiill~lY~~~L~~~l~~h~  176 (349)
T TIGR00378       105 LNYKQQTFNQTAARTNSSLLAIACVALLIPAARATLSHGKEDGKILNLSRGTSIVIIIVYVLFLYFQLGTHH  176 (349)
T ss_pred             cccceeecCHHHHHHHHHHHHHHHHHHHhhhHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence            55444445444     55555554433332  1   1    33   68999999999999999999998773

>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins

Probab=99.86  E-value=1.1e-21  Score=153.26  Aligned_cols=131  Identities=28%  Similarity=0.563  Sum_probs=109.7

Q ss_pred             HHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHHHHhc
Q psy11346         30 LATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCR  109 (219)
Q Consensus        30 l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~~~~~  109 (219)
                      +...+++++++++|.+++++|+|+.+.|++++|++||+||+++++.++++|++++++|+++||+++|++++.|++.++ +
T Consensus         2 ~i~~~a~~l~~~~~~i~~~~~i~~~~~g~~lla~~~slpe~~~~~~~~~~g~~~la~~~~~Gs~~~~~~l~~gl~~l~-~   80 (140)
T PF01699_consen    2 LIIVAAEFLVESVEIIAERLGISESFLGLTLLALATSLPELIVAISAARKGNPDLAIGNIIGSNIFNITLIVGLILLF-G   80 (140)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCTB-HCCHHHCCHHCCCCHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHTHHHHHHHH-S
T ss_pred             EehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCHHHHHHHHHHhhccccchhhhcccchHHHHHHHHHHHHHHh-c
Confidence            345689999999999999999999999999999999999999999999999999999999999999999999999999 3


Q ss_pred             Cce---eEecchhHHHHHHHHHHHHHHHHHHHh----CCcccHHHHHHHHHHHHHHHHH
Q psy11346        110 SQK---IRLDYWPLTRDSIIYMVAVLILAFSLQ----DGKVMWYEALSMVFFYYFYIIE  161 (219)
Q Consensus       110 ~~~---~~~~~~~~~~d~~~~~~~~~~l~~~~~----~g~is~~~gi~Ll~~Y~~yl~~  161 (219)
                      +..   .+.++....++..+++.+..++..+..    ++++++++|++++.+|+.|+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~y~~y~~~  139 (140)
T PF01699_consen   81 PIKLGSQTIDWSSFTRDFSFLLLAILLLILFFLAFIRDGRISRFEGLVLLILYILYLVF  139 (140)
T ss_dssp             -B---------HHHHHHHHHHHHHHHHHHHCCT---HCT-BSHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccchHHHHHHHHHHHHHHHHHHHHHHHcCCeEhHHHHHHHHHHHHHHHhc
Confidence            221   245667788888888877666665544    9999999999999999999876

This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.

>TIGR00846 caca2 calcium/proton exchanger

Probab=99.84  E-value=4.9e-20  Score=166.94  Aligned_cols=134  Identities=19%  Similarity=0.300  Sum_probs=112.1

Q ss_pred             HHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHH
Q psy11346         26 IFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCI  105 (219)
Q Consensus        26 lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~  105 (219)
                      ....+...++++++++++.+++++|+|+.+.|+|++|+|||+||+.+++.++++|+.|+++||++|||+||+++++|++.
T Consensus       228 ~~~~~l~~~a~~lv~~~~~ia~~~gis~~~iGl~lvai~tslpE~~~si~aa~~g~~~lavg~~iGSni~n~l~vl~~~~  307 (365)
T TIGR00846       228 GATIVVALLAEYLVDTIESAVESWGLSVAFIGVILAPIVGNAAEHAGAVIAAFKNKLDIALGVALGSALQIALFVVPVVV  307 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence            34456667899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhc--CceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHH
Q psy11346        106 LLCR--SQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIE  161 (219)
Q Consensus       106 ~~~~--~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~~yl~~  161 (219)
                      ++..  +.+++...+  ..|...+.++.+++.....+|+++|+||++++.+|+.|+..
T Consensus       308 li~~~~~~~~~l~~~--~~~~~~l~~s~~~~~~~~~~~~~~~~eG~~ll~~Y~~~~~~  363 (365)
T TIGR00846       308 LVAWMLGIPMDLNFG--APETVALALSVFLTTITLQDGRSNYLEGAVLLALYIIIAML  363 (365)
T ss_pred             HHHHhcCCceeccCc--HHHHHHHHHHHHHHHHHHcCCcCcHHHHHHHHHHHHHHHHH
Confidence            8821  344444432  23445555555555555679999999999999999999763

This model is generated from the calcium ion/proton exchangers of the CacA family.

>TIGR00846 caca2 calcium/proton exchanger

Probab=99.82  E-value=3.9e-20  Score=167.57  Aligned_cols=136  Identities=18%  Similarity=0.200  Sum_probs=104.1

Q ss_pred             HHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHH
Q psy11346         25 YIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALC  104 (219)
Q Consensus        25 ~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~  104 (219)
                      .+-..+.+.++++++++.+.+++++|.+  + |.++++++||+||+++++.|+.+|++++++||++|||++|+++++|+|
T Consensus        41 ~~~~~~li~~a~~lv~~a~~lA~~~G~~--v-G~ll~a~~ts~pEL~vsi~A~~~g~~~la~gnivGS~i~NilLIlGl~  117 (365)
T TIGR00846        41 LLNLLGIIPLAERVSFATEQLAHRLGPT--L-GGLLNATFGNAVELIISLMALGEGKVEVVRASLLGSILSNLLLVLGLS  117 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCc--h-hhHHHHHHhHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3344456678999999999999999977  4 555669999999999999999999999999999999999999999999


Q ss_pred             HHHhcCceeEec-chhHHHHHH-----HHHHHHHHHHH--H---HhCC-----cccHHHHHHHHHHHHHHHHHHHHHH
Q psy11346        105 ILLCRSQKIRLD-YWPLTRDSI-----IYMVAVLILAF--S---LQDG-----KVMWYEALSMVFFYYFYIIEKAKIV  166 (219)
Q Consensus       105 ~~~~~~~~~~~~-~~~~~~d~~-----~~~~~~~~l~~--~---~~~g-----~is~~~gi~Ll~~Y~~yl~~~~~~~  166 (219)
                      +++   ++.+.. ++.+.++..     ++.++.+.+..  .   ..++     .++|++|++++++|+.|+.++++.+
T Consensus       118 ~l~---~~~~~~~~~~~~~~~~~~~~~ll~~~~~~l~lp~~~~~~~~~~~~~~~ls~~~giill~ly~~yl~~~~~~~  192 (365)
T TIGR00846       118 LFL---GGIKNIREQRFNRGAAQVNSALLLLAILSLVLPLALPAGKPGQDSILGLSRGIAIVMLILYGAFLVFQLVTH  192 (365)
T ss_pred             HHH---hccCccceeeccHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            999   444432 222333332     23333222211  1   1344     5899999999999999999988755

This model is generated from the calcium ion/proton exchangers of the CacA family.

>KOG2399|consensus

Probab=99.79  E-value=7.7e-20  Score=173.26  Aligned_cols=148  Identities=30%  Similarity=0.512  Sum_probs=135.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhC-CCceeehhhhhh
Q psy11346         14 GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFIT-EGDVGTGTVVGS   92 (219)
Q Consensus        14 ~~~~~~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g-~~~iaig~iiGS   92 (219)
                      ..+.+.+++++++|..+...+++||+++++.+++.+++||+++|+|++|+||++||++.++.+++.. .+|+++++++|+
T Consensus       102 ~~i~~~~~~~~~lf~~l~~~a~~yFspsL~~is~~L~l~esvAGVTlLa~GNgapDvf~siasv~~~~~~~~~~~~~lg~  181 (605)
T KOG2399|consen  102 ILIILLVLWLLFLFYLLGITADDYFSPSLSSISSLLRLSESVAGVTLLAFGNGAPDVFASIASVRGTPKGDLALNDLLGG  181 (605)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCceeeEEEeeecCCCchHHhhhheeecCCCcccHHHHHhcc
Confidence            3456778899999999999999999999999999999999999999999999999999999998743 447999999999


Q ss_pred             hHHHHhhHhHHHHHHhcCceeEecchhHHHHHHHHHHHHHHHHHHHhCC-cccHHHHHHHHHHHHHHHHHHHH
Q psy11346         93 GVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDG-KVMWYEALSMVFFYYFYIIEKAK  164 (219)
Q Consensus        93 ~lfn~llv~gl~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g-~is~~~gi~Ll~~Y~~yl~~~~~  164 (219)
                      .+|..+++.|+..+.   +|++++.....||..+++.++..+.++...+ +++.|.+...+..|..|+....-
T Consensus       182 alFVt~~V~G~i~~t---~pFki~~~~~iRDi~Fll~al~~l~~~~~~~~~v~~~~~l~fl~~y~~Yv~~vi~  251 (605)
T KOG2399|consen  182 ALFVTTVVVGLIILT---KPFKINANSFIRDILFLLLALLFLAFILLRGNKVEIWMALTFLGIYVVYVVTVIV  251 (605)
T ss_pred             ceeEEeeEeeeeeee---cceeeccchhHHHHHHHHHHHHHHHHHHhcCCceeHHhHHHHhHHHHHHHHHHHH
Confidence            999999999999988   8899999999999999999998887766555 99999999999999999987663

>KOG1397|consensus

Probab=99.77  E-value=3.6e-18  Score=152.48  Aligned_cols=175  Identities=17%  Similarity=0.246  Sum_probs=125.1

Q ss_pred             HHHHHHHHHh-hhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHH
Q psy11346         25 YIFVFLATVC-DAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPAL  103 (219)
Q Consensus        25 ~lf~~l~i~~-s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl  103 (219)
                      |.+..+.++. ++++..+.|+++...|  ++++|+++..||| +-|+++++.|.++|+.+++.++++||.+.|+++++|+
T Consensus        99 F~lsll~iiPLA~~l~~ateqls~~tg--~tvGgllNAtfGn-aiElii~ilALk~g~~riVq~SlLGSILsnlLLvlG~  175 (441)
T KOG1397|consen   99 FLLSLLGIIPLAERLGFATEQLSAYTG--PTVGGLLNATFGN-AIELIIYILALKNGKVRIVQGSLLGSILSNLLLVLGL  175 (441)
T ss_pred             HHHHHhhhhhHHHHHHHHHHHHHhhcC--CcHHHHHhhhhcc-HHHHHHHHHHhhcCceEEEehhhHHHHHHHHHHHhhH
Confidence            3333444443 6789999999999888  9999999999999 6699999999999999999999999999999999999


Q ss_pred             HHHHhcC---ceeEecchhHHHHHHHHHHHHHHHH--HHH---hC---------C---cccHHHHHHHHHHHHHHHHHHH
Q psy11346        104 CILLCRS---QKIRLDYWPLTRDSIIYMVAVLILA--FSL---QD---------G---KVMWYEALSMVFFYYFYIIEKA  163 (219)
Q Consensus       104 ~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~l~--~~~---~~---------g---~is~~~gi~Ll~~Y~~yl~~~~  163 (219)
                      |++. ++   +..+.++........+++++.+..+  .++   +.         +   .+||..+++|+..|++|++|++
T Consensus       176 s~~~-Ggi~rk~Q~Fn~~~A~v~s~lLl~a~l~~l~P~~l~~~~~~~~~~~~~~~~~l~lSr~~SivmliaYi~~L~FqL  254 (441)
T KOG1397|consen  176 SLFC-GGIRRKDQRFNIKSAGVNSALLLLAVLGILLPTVLHYTYGGEVHDCSSGGAILPLSRGCSIVMLIAYIAYLWFQL  254 (441)
T ss_pred             HHhh-cccccceeecccchhhHHHHHHHHHHHHHHHHHHHHHhcCccccccCCccceeeehhccHHHHHHHHHHHHHHhh
Confidence            9988 43   2334454444444555554444333  222   11         1   4789999999999999999999


Q ss_pred             HHHHhhhchhhhhhhhcccccCCCCCCCCCchhhhccccceeeeee
Q psy11346        164 KIVVTSGYKIYRDEVQFYNQEDIGKSNPTNKAKEMEYMGRWSTLAF  209 (219)
Q Consensus       164 ~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  209 (219)
                      |+++ -.|+-+    + ++++|.+..+..+.++|.|.+++|++++|
T Consensus       255 ~t~~-h~~~~~----~-~~ee~~~~d~~~s~~~e~p~is~~ss~~~  294 (441)
T KOG1397|consen  255 KTAR-HIWQFP----T-PDEEETEQDDEVSNEDEAPNISRWSSIIW  294 (441)
T ss_pred             hccc-ccCCCC----C-CChhcccccccccccCCCCcchHHHHHHH
Confidence            8731 111111    1 11222122222233789999999999887

>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger

Probab=99.76  E-value=1.7e-18  Score=168.30  Aligned_cols=137  Identities=19%  Similarity=0.303  Sum_probs=111.1

Q ss_pred             HHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHHHH
Q psy11346         28 VFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILL  107 (219)
Q Consensus        28 ~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~~~  107 (219)
                      ++.+.+.+..++..+..++..+|||++++|+|++|+|||+||++++++++++|..++|++|++|||+||+++.+|+.+++
T Consensus       942 IiwIsi~SyilV~~at~IG~vlGIse~VmGlTfLA~GTSIPDlisSvivArkG~gdMAVan~iGSNIFnIllgLGlPWlI 1021 (1096)
T TIGR00927       942 IMWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPVPWLL 1021 (1096)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhcCCChhhhhhhhhhhhcccHHHHHHHHHHHccCCcceeeeccccchheeeeeccHHHHH
Confidence            33334456778899999999999999999999999999999999999999999999999999999999999999999876


Q ss_pred             h----cCceeEecchhHHHHHHHHHHHHHHHH--HHHhCCcccHHHHHHHHHHHHHHHHHHHH
Q psy11346        108 C----RSQKIRLDYWPLTRDSIIYMVAVLILA--FSLQDGKVMWYEALSMVFFYYFYIIEKAK  164 (219)
Q Consensus       108 ~----~~~~~~~~~~~~~~d~~~~~~~~~~l~--~~~~~g~is~~~gi~Ll~~Y~~yl~~~~~  164 (219)
                      .    +..++.+++..+.....+++..+++++  +.+.+.+++|..|++|+++|++|+++.+-
T Consensus      1022 ~~li~g~~pV~V~S~GL~~sI~LLF~~LlflissI~l~kwrL~R~lGivlLvlYvvFLV~aiL 1084 (1096)
T TIGR00927      1022 FSLINGLQPVPVSSNGLFCAIVLLFLMLLFVISSIASCKWRMNKILGFTMFLLYFVFLIISVM 1084 (1096)
T ss_pred             HHHhccCcceeecCccHHHHHHHHHHHHHHHHHHHHhcceEEechHHHHHHHHHHHHHHHHHH
Confidence            3    234667777666544444333333222  23456799999999999999999998764

>TIGR00378 cax calcium/proton exchanger (cax)

Probab=99.76  E-value=1e-17  Score=151.00  Aligned_cols=133  Identities=19%  Similarity=0.325  Sum_probs=113.7

Q ss_pred             HHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHH
Q psy11346         26 IFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCI  105 (219)
Q Consensus        26 lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~  105 (219)
                      ....+...++++++++++.+++++|+|+.+.|++++|++||+||+++++.++++|+.|+++|+++|||++|.+++++...
T Consensus       212 ~~~v~i~~~a~~lv~~~~~~~~~~gi~~~~igl~iva~~tslpE~~~ai~aa~~~~~~~ai~~~~GS~i~~~l~v~p~lv  291 (349)
T TIGR00378       212 GTTVIVAFCSEFLVGTIDNVVESTGLSKLFIGVIVIPIVGNAAEHATAVLVAMKDKMDLALGVAIGSSLQIALFVAPVLV  291 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHHcCCcccHHHHHHhHHHHHHHHHHHHHH
Confidence            34456667899999999999999999999999999999999999999999999999999999999999999999999866


Q ss_pred             HHh--cCceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHH
Q psy11346        106 LLC--RSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYII  160 (219)
Q Consensus       106 ~~~--~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~~yl~  160 (219)
                      ++.  .++|+.+.-+  ..|...+.++.+++.....||+.+|.||.++++.|+++-.
T Consensus       292 l~~~~~~~~~~L~f~--~~~~~~l~~~v~~~~~~~~dg~~n~leG~~ll~~Y~i~~~  346 (349)
T TIGR00378       292 IVGWMIDVPMTLNFS--TFELVALFIAVLLSNYISLDGESNWLEGVMLLAMYIIIAM  346 (349)
T ss_pred             HHHHHhCCCceecCc--HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence            552  3556655543  3666666666666667788999999999999999998743

>KOG1307|consensus

Probab=99.73  E-value=6.3e-18  Score=153.62  Aligned_cols=129  Identities=22%  Similarity=0.383  Sum_probs=113.7

Q ss_pred             hhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHHHHhc-----
Q psy11346         35 DAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCR-----  109 (219)
Q Consensus        35 s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~~~~~-----  109 (219)
                      |+.++..++.+++.+|||+.++|+|++|.|||.||+++|++.+|+|..|+|+++-+|||+|.+++.+|+.++++.     
T Consensus       440 SYLMVWwa~~iGeT~gIp~eIMGLTiLAAGTSIPDlitSvIVARKGlGDMAVSsSiGSNiFDI~VGLplPWLL~~lI~~~  519 (588)
T KOG1307|consen  440 SYLMVWWANIIGETLGIPDEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSIGSNIFDILVGLPLPWLLYTLIYGF  519 (588)
T ss_pred             HHHHHHHHHHcccccCCCHHHhhhhhhhcCCchHHhhHhhhhcccccccceeecccccchhheeecCCcHHHHHHHHhhc
Confidence            788999999999999999999999999999999999999999999999999999999999999999999998862     


Q ss_pred             CceeEecchhHHHHHHHHHHHHHH--HHHHHhCCcccHHHHHHHHHHHHHHHHHHH
Q psy11346        110 SQKIRLDYWPLTRDSIIYMVAVLI--LAFSLQDGKVMWYEALSMVFFYYFYIIEKA  163 (219)
Q Consensus       110 ~~~~~~~~~~~~~d~~~~~~~~~~--l~~~~~~g~is~~~gi~Ll~~Y~~yl~~~~  163 (219)
                      +.++.++++.+.....++.+.+++  +.+.+.+++....-|+.|+++|.+|+.+.+
T Consensus       520 ~~~i~vsS~GL~csi~lLf~ml~v~v~~ia~~rWrMnK~lG~~m~llY~~Fl~~sv  575 (588)
T KOG1307|consen  520 KSKISVSSNGLVCSIGLLFAMLIVLVLGIALSRWRMNKILGFLMILLYFVFLIISV  575 (588)
T ss_pred             CCceeecCCceehHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHhhh
Confidence            334888888777777666555443  345667899999999999999999998865

>TIGR00845 caca sodium/calcium exchanger 1

Probab=99.70  E-value=2.6e-16  Score=154.43  Aligned_cols=130  Identities=17%  Similarity=0.265  Sum_probs=105.1

Q ss_pred             hhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCC-CceeehhhhhhhHHHHhhHhHHHHHHh-----
Q psy11346         35 DAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITE-GDVGTGTVVGSGVFNMLAVPALCILLC-----  108 (219)
Q Consensus        35 s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~-~~iaig~iiGS~lfn~llv~gl~~~~~-----  108 (219)
                      ...+++.+..++..+|+++.++|+|++|+|||+||++++++++++++ .|+++||++|||+||+++++|+++++.     
T Consensus       770 ~~~i~~~a~~ig~~~gi~~~viGlt~vA~GTSlPEl~~S~~aA~~~~~~d~aigNv~GSNifNi~l~lGv~~~i~~~~~~  849 (928)
T TIGR00845       770 TAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYHA  849 (928)
T ss_pred             HHHHHHHHHHHHHHcCCCHHhhhheeeeEecCcHHHHHHHHHHHcCCCCceeEEeecchHHHHHHHHHHHHHHHhhhhhc
Confidence            55688899999999999999999999999999999999999999865 999999999999999999999999983     


Q ss_pred             -cCceeEecchhHHHHHHHHHHHHHHHHH-HHh-C-----C------cccHHHHHHHHHHHHHHHHHHHH
Q psy11346        109 -RSQKIRLDYWPLTRDSIIYMVAVLILAF-SLQ-D-----G------KVMWYEALSMVFFYYFYIIEKAK  164 (219)
Q Consensus       109 -~~~~~~~~~~~~~~d~~~~~~~~~~l~~-~~~-~-----g------~is~~~gi~Ll~~Y~~yl~~~~~  164 (219)
                       .+.++.++...+.++..+++...++++. +++ +     |      .-.+..+.+++.++++|+++..-
T Consensus       850 ~~~~~~~V~~~~l~~~v~l~~~~a~l~~~vl~~rr~~~~g~elggp~~~~~~~~~~~~~lw~~y~~~s~l  919 (928)
T TIGR00845       850 ANGTQFKVSPGTLAFSVTLFTIFAFICIGVLLYRRRPEIGGELGGPRTAKLLTSALFVLLWLLYILFSSL  919 (928)
T ss_pred             ccCceEEECccchhHHHHHHHHHHHHHHHHHHHhhcccccceeCCCCCcchhhhHHHHHHHHHHHHHHHH
Confidence             1347788877778887766544443332 222 2     1      23457788899999999887653

This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family

>PLN03151 cation/calcium exchanger; Provisional

Probab=99.50  E-value=6.8e-13  Score=127.75  Aligned_cols=140  Identities=12%  Similarity=0.129  Sum_probs=107.7

Q ss_pred             HHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCC--ceeehhhhhhhHHHHhhHhHH
Q psy11346         26 IFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEG--DVGTGTVVGSGVFNMLAVPAL  103 (219)
Q Consensus        26 lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~--~iaig~iiGS~lfn~llv~gl  103 (219)
                      +.+..+..++..++..++.++..+|+|++++|+|++|+|||+||+++++.-+++|.+  .+|+++++|+++||+++.+|+
T Consensus       491 ~Si~wi~~~a~elv~~l~~iG~i~~is~~~lglTvlA~gnsi~Dlian~~lA~~G~~~m~mA~~a~~ggp~F~il~glG~  570 (650)
T PLN03151        491 MSIVWFYMIANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLMSNVALAMNGGDGVQIAMSGCYAGPMFNTLVGLGM  570 (650)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccHHHHHHHHHHHHcCCchhHHHHHHhhhhhHHHHHHhccH
Confidence            334455556788999999999999999999999999999999999999999999976  578889999999999999999


Q ss_pred             HHHHhc--C--ceeEecch-hHHHHHHHHHHHHHHH--HHHHhCCcccHHHHHHHHHHHHHHHHHHHHH
Q psy11346        104 CILLCR--S--QKIRLDYW-PLTRDSIIYMVAVLIL--AFSLQDGKVMWYEALSMVFFYYFYIIEKAKI  165 (219)
Q Consensus       104 ~~~~~~--~--~~~~~~~~-~~~~d~~~~~~~~~~l--~~~~~~g~is~~~gi~Ll~~Y~~yl~~~~~~  165 (219)
                      ..++..  +  .+...... .+.....+++..+++.  .....+.+++|..|+.++.+|++|+++..-.
T Consensus       571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~L~~~li~~~~~~f~~~R~~G~~li~~Y~~Fl~~~~~~  639 (650)
T PLN03151        571 SMLLGAWSKSPESYMLPEDSSLFYTMGFLVSGLIWALVVLPRNDMRPNKTLGVGLIALYLIFLTFRVST  639 (650)
T ss_pred             HHHHHHhhcCCCceeecCCChHHHHHHHHHHHHHHHHHHHHHhCeeechhHHHHHHHHHHHHHHHHHHH
Confidence            998842  1  12333322 2333333333333222  2334678999999999999999999997753

>PRK10599 calcium/sodium:proton antiporter; Provisional

Probab=99.45  E-value=2.2e-12  Score=116.53  Aligned_cols=133  Identities=8%  Similarity=0.137  Sum_probs=110.1

Q ss_pred             HHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHHH
Q psy11346         27 FVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCIL  106 (219)
Q Consensus        27 f~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~~  106 (219)
                      .....+..++++++++|...+.+|+|+.+.|+++..+|| +||.++++.++++|+.|.+++-.+||.+...+++++...+
T Consensus       230 ~lv~Vv~lAe~lv~sIe~~v~~~Glp~afiGvIIaiv~~-apE~~tAV~aA~kNkmq~slnialGSsLq~illtvP~lvl  308 (366)
T PRK10599        230 HLIAVIAVTKMNASPLETLLTSMNAPVAFTGFLVALLIL-SPEGLGALKAVLNNQVQRAMNLFFGSVLATISLTVPVVTL  308 (366)
T ss_pred             HHHHHHHHHHHhHhhHHHHHHhcCCCHHHHHHHHHHHHc-chhHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334445569999999999999999999999999866666 9999999999999999999999999999999999998887


Q ss_pred             Hh--cCceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHH
Q psy11346        107 LC--RSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEK  162 (219)
Q Consensus       107 ~~--~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~~yl~~~  162 (219)
                      +.  .++|+.+.-++  .+...+.++.++....+.+||-++.+|..++++|..|+...
T Consensus       309 ig~~~g~pm~L~f~~--~e~vlL~ltv~v~~~t~~dGrsN~LeG~~hL~lf~~y~~l~  364 (366)
T PRK10599        309 IAFLTGNELQFGLGA--PEMVVMVASLVLCHISFSTGRTNVLNGAAHLALFAAYLMTI  364 (366)
T ss_pred             HHHHhCCCeEecCCH--HHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHH
Confidence            74  36788877543  34444444444444556899999999999999999998764

>KOG2399|consensus

Probab=99.44  E-value=1.8e-12  Score=123.42  Aligned_cols=153  Identities=14%  Similarity=0.169  Sum_probs=113.4

Q ss_pred             cCCccchhHHHHHHHHHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceee
Q psy11346          7 NFPFGFVGAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGT   86 (219)
Q Consensus         7 ~~~~~~~~~~~~~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iai   86 (219)
                      +-||.+..++..+  .-+.+.++....++.-++.-++.++..+|+|++++|+|++|+|||..|+++++.-+++|.++||.
T Consensus       437 ~~ppk~~~~v~~~--~gF~mSi~wI~~~A~Eiv~vl~~lG~I~~ls~siLGLTv~AWgNSiGDLIAniavak~G~p~MAm  514 (605)
T KOG2399|consen  437 DKPPKFYHWVFSA--LGFLMSIAWIYLIANELVAVLTMLGVIFGLSPSILGLTVLAWGNSIGDLIANIAVAKQGYPRMAM  514 (605)
T ss_pred             cCCCchHhHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhccHHHHHHHHHHHHcCcHHHHH
Confidence            4566666544321  12223334445567779999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHhhHhHHHHHHhc--CceeE--ecc-hhHHHHHHHHHHHHHHH--HHHHhCCcccHHHHHHHHHHHHHHH
Q psy11346         87 GTVVGSGVFNMLAVPALCILLCR--SQKIR--LDY-WPLTRDSIIYMVAVLIL--AFSLQDGKVMWYEALSMVFFYYFYI  159 (219)
Q Consensus        87 g~iiGS~lfn~llv~gl~~~~~~--~~~~~--~~~-~~~~~d~~~~~~~~~~l--~~~~~~g~is~~~gi~Ll~~Y~~yl  159 (219)
                      |.++|+++||+++.+|+..++..  +.+.+  ... ........++.++.+..  ..+..+.++.|..|+.|+.+|+.|.
T Consensus       515 aac~GGplfn~lvg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~fL~i~l~~slv~~~~~~f~~~r~~gi~L~~lyi~f~  594 (605)
T KOG2399|consen  515 AACIGGPLFNLLVGLGLPLVISSLQGKPGNIVIPEDNSLRITLIFLLIGLLTSLVLIPTNRFRLRRVLGIGLLSLYIAFT  594 (605)
T ss_pred             HHHhhhHHHHHHHHhhHHHHHHHHhcCCCceecccCCceehhHHHHHHHHHHHHHHHhcccceeccchhhHHHHHHHHHH
Confidence            99999999999999999988841  23332  211 22222334444444332  3345688999999999999999994


Q ss_pred             HH
Q psy11346        160 IE  161 (219)
Q Consensus       160 ~~  161 (219)
                      .+
T Consensus       595 ~~  596 (605)
T KOG2399|consen  595 LI  596 (605)
T ss_pred             HH
Confidence            44

>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]

Probab=99.37  E-value=1.5e-11  Score=110.34  Aligned_cols=130  Identities=13%  Similarity=0.168  Sum_probs=101.2

Q ss_pred             hhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHHHHhcCce-
Q psy11346         34 CDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQK-  112 (219)
Q Consensus        34 ~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~~~~~~~~-  112 (219)
                      .+.+..+..|.++.|.|  |.++|+++..+|| +-|++...++.++|++.++.+++.||.+-|+++++|+|.++ ++.+ 
T Consensus        49 lA~~v~~aaE~lA~~vG--~~~G~Lina~f~~-~iEvil~~~al~~G~~~lvr~Si~gsIm~~~llv~Glslll-Gglr~  124 (368)
T COG0387          49 LAFSVVRAAEVLAARVG--EPYGSLINALFGN-AIEVILIVAALKSGSPTLVRDSLYGSIMINLLLVVGLSLLL-GGLRH  124 (368)
T ss_pred             HHHHHHHHHHHHHHHhC--CchhHHHHHHHHH-HHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH-cchhh
Confidence            78899999999999888  9999999999999 66999999999999999999999999999999999999999 5422 


Q ss_pred             --eEecchhHHHHHHHHHHH-HH--HHHHHHh--CC-----cccHHHHHHHHHHHHHHHHHHHHHHH
Q psy11346        113 --IRLDYWPLTRDSIIYMVA-VL--ILAFSLQ--DG-----KVMWYEALSMVFFYYFYIIEKAKIVV  167 (219)
Q Consensus       113 --~~~~~~~~~~d~~~~~~~-~~--~l~~~~~--~g-----~is~~~gi~Ll~~Y~~yl~~~~~~~~  167 (219)
                        .+.++.........+..+ .+  ++..++.  ++     ..++..+++++++|.++++++.++|+
T Consensus       125 ~~Q~fN~~~a~~~~~~L~~~~~ialv~P~~~~~~~~~~~~~~~s~~~avv~i~~Y~lfL~fql~tH~  191 (368)
T COG0387         125 KTQPFNPHGAGTYLALLFTAATIALVLPTFFPYTGGGNFSLGQSLFVAVVLIALYGLFLFFQLKTHA  191 (368)
T ss_pred             ceeecchhhHHHHHHHHHHHHHHHhhhhhhhcccCCCcchHhHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence              233333333333333222 22  2222222  11     46789999999999999999999884

>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]

Probab=99.30  E-value=6.6e-11  Score=106.26  Aligned_cols=146  Identities=16%  Similarity=0.276  Sum_probs=122.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhH
Q psy11346         15 AIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGV   94 (219)
Q Consensus        15 ~~~~~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~l   94 (219)
                      |.......++..-..+....+++++.++|...+.+|+++.+.|+++.++...+||..+++.++++|+.|.+.+-.+||.+
T Consensus       217 ~s~~~s~~vLl~~tv~v~~lae~lv~~le~~l~~~g~~~~F~G~iIa~lVgn~~E~~tAi~aA~~~~mqls~nia~Gsal  296 (368)
T COG0387         217 WSVLLSTGVLLIATVLVALLAEILVGSLEAVLESLGAPPAFVGLIIAALVGNAPEHLTALRAALNNRMQLSMNIAMGSAL  296 (368)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhccCHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            44444455555556666778999999999999999999999999999999669999999999999999999999999999


Q ss_pred             HHHhhHhHHHHHHh--cCceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHH
Q psy11346         95 FNMLAVPALCILLC--RSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEK  162 (219)
Q Consensus        95 fn~llv~gl~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~~yl~~~  162 (219)
                      ...++.++...++.  .++|+.+.-.  ..|...+..+.++..+...||+-+|.+|..++.+|..|....
T Consensus       297 q~~lltiP~lvlis~~~gqpm~l~~~--~~elV~l~~~v~~~~~~~sdG~sn~leG~~lL~lya~~~~~f  364 (368)
T COG0387         297 QTALLTIPVLVLISLFTGQPLTLGFG--PPELVLLVVTVFLANILFSDGRTNWLEGVVLLALYAIYAMLF  364 (368)
T ss_pred             HHHHHHHHHHHHHHHHhCCCccccCC--HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence            99988888766552  3677777644  457777777777777888999999999999999999997643

>KOG1397|consensus

Probab=99.19  E-value=7.7e-11  Score=105.88  Aligned_cols=135  Identities=21%  Similarity=0.320  Sum_probs=115.2

Q ss_pred             HHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhH
Q psy11346         23 TGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPA  102 (219)
Q Consensus        23 ~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~g  102 (219)
                      ++.....+.-.+++|+|+++|...++.++|..+.|++++|+...+.|...+|.-+.+|+.|++.|-.+||.+...+++++
T Consensus       294 ~L~~~T~~vsllaeyLV~~Id~~~ds~~ls~~FiglillpiVgNaaEh~~AI~fA~k~kldLslgVaigsalQI~Lf~vP  373 (441)
T KOG1397|consen  294 WLLIMTLLVSLLAEYLVDTIDDVSDSWGLSVKFIGLILLPIVGNAAEHAGAISFAMKDKLDLSLGVAIGSALQIALFVVP  373 (441)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhheeeeecccCchHHhhcceeeeecCcccchhhhhhhhhHhHHHhhhh
Confidence            33344455566789999999999999999999999999999988999999999999999999999999999999999999


Q ss_pred             HHHHHhc--CceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHH
Q psy11346        103 LCILLCR--SQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYI  159 (219)
Q Consensus       103 l~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~~yl  159 (219)
                      .+.++..  +.++.++-  -..|...+.++.++..+++.+|+-++.+|.+|++.|++-.
T Consensus       374 ~~v~v~W~~g~~M~LnF--~~~et~~l~isVfl~~y~lqdG~Sny~kG~mLll~Y~Iia  430 (441)
T KOG1397|consen  374 FSVIVGWIMGISMDLNF--PLLETACLFISVFLVAYLLQDGKSNYFKGLMLLLCYLIIA  430 (441)
T ss_pred             HHHHhhhhcCCceEEec--cHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHH
Confidence            9988853  44444442  2457777778888888899999999999999999997654

>KOG1306|consensus

Probab=98.99  E-value=8.7e-11  Score=108.12  Aligned_cols=147  Identities=24%  Similarity=0.414  Sum_probs=109.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhcccHHHHHHHh------------------CCChhhhHHHHHHhcCChhHHHHHHHHHh
Q psy11346         17 IFPTLITGYIFVFLATVCDAYFVPCIDIVCQKL------------------ELSNDVAGATLMASGTSSPELFINLIGTF   78 (219)
Q Consensus        17 ~~~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~l------------------gis~~v~G~tlla~gts~PEl~~si~a~~   78 (219)
                      +.|.+.+.|+|+.+.+++++ |.-++|.+++.-                  -+++++..+|++|+|+|+||+..+++..-
T Consensus        29 ~vYfv~l~Y~F~Gvsiiadr-Fm~sIE~its~~kev~v~k~~g~e~~~~vriWNeTVsnltLmAlGsSaPEIlLSiIe~~  107 (596)
T KOG1306|consen   29 IVYFVALPYAFLGVSIIADR-FMASIEVITSASREVIVIKPTGEESTTYVRVWNETVSNLTLMALGSSAPEILLSIIEFC  107 (596)
T ss_pred             eEEeehhHHHHhhHHHHhhh-heeeeeccccccceeEEEccCCceeEEEEEEechhhHHHHHhhcccCcchhhHHHHHHh
Confidence            55788999999999998876 556778887763                  37999999999999999999999999986


Q ss_pred             hC---CCceeehhhhhhhHHHHhhHhHHHHHHhcCcee-Eecc-hhHHHHHHHHHHHHHHH---HHHHhCCcccHHHHHH
Q psy11346         79 IT---EGDVGTGTVVGSGVFNMLAVPALCILLCRSQKI-RLDY-WPLTRDSIIYMVAVLIL---AFSLQDGKVMWYEALS  150 (219)
Q Consensus        79 ~g---~~~iaig~iiGS~lfn~llv~gl~~~~~~~~~~-~~~~-~~~~~d~~~~~~~~~~l---~~~~~~g~is~~~gi~  150 (219)
                      .+   ..|++.|+++||.+||+..+.++|..+..++.. ++.+ ..+.....+-..+..++   +.++.+|.+..||+++
T Consensus       108 gn~f~agdLGPgTIVGSAAfnlF~iiAVCv~vip~Ge~rki~~lrVf~VtA~ws~fAYiWLyliLsV~sPnvv~vwEall  187 (596)
T KOG1306|consen  108 GNEFQAGDLGPGTIVGSAAFNLFEIIAVCVRVIPAGELRKIFHLRVFFVTADWSIFAYIWLYLILSVFSPNVVYVWEALL  187 (596)
T ss_pred             cccccccCcCCceEechhhhhhhhheEEEEEEcCCcccccccCceEEEEEeeHHHHHHHHHhheeEeccCCeeEEeehhh
Confidence            43   468999999999999999999999987432111 1111 01111111111222222   3345789999999999


Q ss_pred             HHHHHHHHHHHHHH
Q psy11346        151 MVFFYYFYIIEKAK  164 (219)
Q Consensus       151 Ll~~Y~~yl~~~~~  164 (219)
                      .+..|...+...+.
T Consensus       188 T~~ffp~~vv~aya  201 (596)
T KOG1306|consen  188 TLLFFPLVVVSAYA  201 (596)
T ss_pred             hHhhhhhhhhHHHH
Confidence            99999998887764

>KOG1306|consensus

Probab=98.91  E-value=1e-09  Score=101.16  Aligned_cols=149  Identities=17%  Similarity=0.237  Sum_probs=106.3

Q ss_pred             Cccch-hHHHHHHHHHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhC-CCceee
Q psy11346          9 PFGFV-GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFIT-EGDVGT   86 (219)
Q Consensus         9 ~~~~~-~~~~~~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g-~~~iai   86 (219)
                      |+++. || ..|++.+++.-+.-.+++     +.++..+-..|+.+++..+|++|+|||.||.+.|-+|+.+. -.|-++
T Consensus       421 Pt~~~~Gw-~cFvvsi~~Igl~ta~ig-----d~as~fgC~vglkdsVtA~~~vA~GTS~PDtfASkiAA~~d~~AD~~i  494 (596)
T KOG1306|consen  421 PTEICHGW-ACFVVSILFIGLLTAVIG-----DLASHFGCTVGLKDSVTAVTFVALGTSVPDTFASKIAAEQDQTADASI  494 (596)
T ss_pred             chhhcCcc-HHHHHHHHHHHHHHHHHH-----HHHHhhceeecCccceeeeeeehhcCCCcHHHHHHHHHhhcccccccc
Confidence            55555 45 445555554444444444     35677777889999999999999999999999999998754 589999


Q ss_pred             hhhhhhhHHHHhhHhHHHHHHh------cCceeEecchhHHHHHHHHHHHHH-HHHHHHhC-----Cc------ccHHHH
Q psy11346         87 GTVVGSGVFNMLAVPALCILLC------RSQKIRLDYWPLTRDSIIYMVAVL-ILAFSLQD-----GK------VMWYEA  148 (219)
Q Consensus        87 g~iiGS~lfn~llv~gl~~~~~------~~~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~-----g~------is~~~g  148 (219)
                      ||+-|||..|.++.+|+.+.+.      .|.+++++...+.....++.+..+ .+..+.++     |.      -....+
T Consensus       495 gNvTgSNaVNvflGiG~aW~iaavy~a~~g~~f~v~~g~l~FsvtlF~i~s~~~i~vl~~RR~~iggELGGP~~~k~~ta  574 (596)
T KOG1306|consen  495 GNVTGSNAVNVFLGIGLAWSIAAVYWAAQGEPFYVEAGTLAFSVTLFTIFSVVCIVVLVYRRPHIGGELGGPRGWKLLTA  574 (596)
T ss_pred             cceecccceeEEEeccHHHHHHHHHHHhcCceEEeccceeeeehHHHHHHHHHhheeeEEeccccCcccCCcchHHHHHH
Confidence            9999999999999999998764      367899887766555544443333 22222221     11      234677


Q ss_pred             HHHHHHHHHHHHHHH
Q psy11346        149 LSMVFFYYFYIIEKA  163 (219)
Q Consensus       149 i~Ll~~Y~~yl~~~~  163 (219)
                      .+++.++++|+++..
T Consensus       575 ~~fv~lW~~yv~~s~  589 (596)
T KOG1306|consen  575 ALFVSLWLLYVLLSS  589 (596)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            788888888888754

>PRK10599 calcium/sodium:proton antiporter; Provisional

Probab=97.90  E-value=0.00018  Score=65.54  Aligned_cols=129  Identities=12%  Similarity=0.164  Sum_probs=82.3

Q ss_pred             hhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHh---hCCCceeehhhhhhhHHHHhhHhHHHHHHhcC
Q psy11346         34 CDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTF---ITEGDVGTGTVVGSGVFNMLAVPALCILLCRS  110 (219)
Q Consensus        34 ~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~---~g~~~iaig~iiGS~lfn~llv~gl~~~~~~~  110 (219)
                      ++---++-+|.+|+|+|  |=. |-.++++.--.=|. .-|.+..   ++++.++--+++-..+..+--++|+|+++ +|
T Consensus        53 ~~~~~v~hAe~lA~~~G--eP~-GtliLtlsv~~iEv-~li~~~Ml~g~~~~tlaRDtvfa~vMi~~nGilGl~ll~-GG  127 (366)
T PRK10599         53 SAFSVVRHADVLAHRLG--EPY-GSLILSLSVVILEV-SLISALMATGDAAPTLMRDTLYSIIMIVTGGLVGFSLLL-GG  127 (366)
T ss_pred             HHHHHHHHHHHHHHHHC--CCh-HHHHHHHHHHHHHH-HHHHHHHcCCCCCchHHHHHHHHHHHHHhccHHHHHHHH-hc
Confidence            55557889999999999  554 44555554445573 2223332   35788999999999999999999999999 54


Q ss_pred             ce---eEecchhHH-HHHHHHHHHHHHHH--HHHhCC----cccHHHHHHHHHHHHHHHHHHHHHHH
Q psy11346        111 QK---IRLDYWPLT-RDSIIYMVAVLILA--FSLQDG----KVMWYEALSMVFFYYFYIIEKAKIVV  167 (219)
Q Consensus       111 ~~---~~~~~~~~~-~d~~~~~~~~~~l~--~~~~~g----~is~~~gi~Ll~~Y~~yl~~~~~~~~  167 (219)
                      .+   .+.+..... ....++.++.+.+.  .+...+    ..++..+++++++|..|+.++.++|+
T Consensus       128 lr~~eQ~fn~~ga~~~~~~ll~La~l~LvlP~~~~~~~~s~~~s~~~avv~lvlY~~fL~fQl~tHr  194 (366)
T PRK10599        128 RKFATQYMNLFGIKQYLIALFPLAIIVLVFPMALPGANFSTGQALLVALISAAMYGVFLLIQTKTHQ  194 (366)
T ss_pred             cccCeeecCHHhHHHHHHHHHHHHHHHHhcCcccCCCccchhHHHHHHHHHHHHHHHHHHHhccchH
Confidence            22   223322121 11222223332222  222223    24678899999999999999998773

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	219
3v5u_A	320	Uncharacterized membrane protein MJ0091; lipid cub	2e-11
3v5u_A	320	Uncharacterized membrane protein MJ0091; lipid cub	7e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Length = 320

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 7/114 (6%)

Query: 47  QKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCIL 106
             L++S+ V G TL+A GTS PEL ++L       G +  G V+GS + ++    A+  L
Sbjct: 191 LALDISDKVIGFTLVAFGTSLPELMVSLAAAKRNLGGMVLGNVIGSNIADIGGALAVGSL 250

Query: 107 LCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYII 160
                   +          + ++  L+L    +  K+  ++ +  +  Y   I 
Sbjct: 251 FMHLPAENVQMA-------VLVIMSLLLYLFAKYSKIGRWQGILFLALYIIAIA 297

>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Length = 320

 Score = 59.6 bits (145), Expect = 7e-11
 Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 5/116 (4%)

Query: 45  VCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALC 104
           + +   +SN V GAT+MA GTS PE+  +   +++    +  G  +GS + N+  V  L 
Sbjct: 30  IARHFNVSNFVIGATVMAIGTSLPEILTSAYASYMHAPGISIGNAIGSCICNIGLVLGLS 89

Query: 105 ILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYII 160
            ++     I +D   L ++ ++Y++ V+  A  +      W + + ++  +  Y+ 
Sbjct: 90  AIIS---PIIVD-KNLQKNILVYLLFVIFAAV-IGIDGFSWIDGVVLLILFIIYLR 140

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 2e-04
 Identities = 22/170 (12%), Positives = 53/170 (31%), Gaps = 25/170 (14%)

Query: 30  LATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGT--G 87
           L  V +A      ++ C+ L  +        +++ T++     +   T  T  +V +   
Sbjct: 250 LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL-TPDEVKSLLL 308

Query: 88  TVVGSGVF---------NMLAVPALCILLCRSQKIRLDYWP-LTRDSIIYMVAVLILAFS 137
             +              N   + ++     R      D W  +  D +  ++   +    
Sbjct: 309 KYLDCRPQDLPREVLTTNPRRL-SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE 367

Query: 138 LQDGKVMWYEALSMVFFYYFYIIEKAKIVVTSG-YKIYRDEVQFYNQEDI 186
             + + M ++ LS VF         A I   +    +   +V   +   +
Sbjct: 368 PAEYRKM-FDRLS-VF------PPSAHI--PTILLSLIWFDVIKSDVMVV 407

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	219
3v5u_A	320	Uncharacterized membrane protein MJ0091; lipid cub	99.94
3v5u_A	320	Uncharacterized membrane protein MJ0091; lipid cub	99.9

>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A*

Probab=99.94  E-value=1.5e-26  Score=204.82  Aligned_cols=137  Identities=23%  Similarity=0.404  Sum_probs=123.6

Q ss_pred             HHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHH
Q psy11346         25 YIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALC  104 (219)
Q Consensus        25 ~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~  104 (219)
                      ..-..+.+.++++|+++++.+++++|+||.+.|+|++|+|||+||+++++.|+++|++|+++||++|||+||+++++|++
T Consensus        10 ~~g~~~l~~~a~~lv~~~~~la~~lgis~~viGltiva~GTSlPEl~vsi~A~~~g~~diaiGnivGSni~nillvlG~~   89 (320)
T 3v5u_A           10 LLGLILLYYGSDWFVLGSERIARHFNVSNFVIGATVMAIGTSLPEILTSAYASYMHAPGISIGNAIGSCICNIGLVLGLS   89 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTBCHHHHHHTHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHcccHHHHHHHHHHhCCCCceeeeeecchHHHHHHHHHHHH
Confidence            33445667899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHH
Q psy11346        105 ILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEKAKIV  166 (219)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~~yl~~~~~~~  166 (219)
                      +++   +|+++ ++.+.||..+++++.+++..+..++ ++|++|++|++.|+.|+.++++++
T Consensus        90 ~li---~p~~v-~~~~~~d~~~~l~~~~~l~~~~~~g-is~~~g~~Ll~~Y~~yl~~~~~~~  146 (320)
T 3v5u_A           90 AII---SPIIV-DKNLQKNILVYLLFVIFAAVIGIDG-FSWIDGVVLLILFIIYLRWTVKNG  146 (320)
T ss_dssp             HHH---SCBCC-CHHHHHHHHHHHHHHHHHHHHTTTC-BCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHH---ccccc-cHHHHHHHHHHHHHHHHHHHHHHcc-cHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999   66777 5678899999888877766666788 999999999999999999987643

>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A*

Probab=99.90  E-value=3.1e-23  Score=183.45  Aligned_cols=135  Identities=21%  Similarity=0.287  Sum_probs=120.6

Q ss_pred             HHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHh
Q psy11346         22 ITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVP  101 (219)
Q Consensus        22 ~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~  101 (219)
                      ..+.....+...++++|+++++.+++.+|+|+.+.|+|++|+|||+||+++++.++++|+.|+++||++|||+||.++++
T Consensus       166 ~~l~~~l~~l~~~a~~lv~~~~~ia~~~gis~~~iGltlva~gtslPE~~~sv~aa~~g~~~laig~iiGS~ifn~~~v~  245 (320)
T 3v5u_A          166 VLLIIGLIGVLVGAELFVDGAKKIALALDISDKVIGFTLVAFGTSLPELMVSLAAAKRNLGGMVLGNVIGSNIADIGGAL  245 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHTHHHHHTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTHH
T ss_pred             HHHHHHHHHHHHHHHhccccHHHHHHHhCCchHHHHHHHHHHHhccHHHHHHHHHHHcCCCcHHHHHHHhHHHHHHHHHH
Confidence            33344555667789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHH-HHHHHH
Q psy11346        102 ALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYF-YIIEKA  163 (219)
Q Consensus       102 gl~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~~-yl~~~~  163 (219)
                      |++.++   +|++++    .+|..+++.+++++..+..+++++|+||++++++|+. |+.+..
T Consensus       246 g~~~li---~p~~~~----~~d~~~~l~~~~ll~~~~~~~~i~~~eG~~ll~~Y~~~y~~~~~  301 (320)
T 3v5u_A          246 AVGSLF---MHLPAE----NVQMAVLVIMSLLLYLFAKYSKIGRWQGILFLALYIIAIASLRM  301 (320)
T ss_dssp             HHHHHH---SCBCCC----HHHHHHHHHHHHHHHHHHHHSCBSHHHHHHHHHHHHHHHHHSCS
T ss_pred             HHHHhh---ccccch----HHHHHHHHHHHHHHHHHHhCCcCcHHHHHHHHHHHHHHHHHHHH
Confidence            999999   666664    6898888877776666778999999999999999999 988755

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00