Psyllid ID: psy11349

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
MSTRVDIGRQEVIRTTLVVIATQILQRDPSALTCKEKELKLIQSGSKTTVSINIPQFDASFTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLERTAQSFPNKGQYEVLGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLKMNDLMDYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDASFTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLERTAQSFPNKGSSKASVPAFVA
cccccccccHHcccccEEEEEEEEcccccccEEEEccccEEcccccEEEEEEEEccccEEEEEccHHHHHHHHHHHHcccccccccccccEEEEEEEccccccccccHHHHHHcccccEEEccEEccccccccccEEEEccHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHHHHHccccEEEEccccccccccccccccHHHHHHHHHcccccccccHHHHHHHcccccccHHHHHHHHHHHHHccccEEEEccccccccccEEEEEEEEEEcccEEEEEEEccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccc
cccEEEcccHHHEccEEEEEEEEEEcccHHHHHEHHHHcEEEccccccEEEEEEcccccEEcccHHHHHHHHHHHHcccccccccEEEEEEEEEEEcccccccccccHHHHHHcccEEEEEEEEEEccccccccccEEEccHHHHHHHHHHHHHcccccccEEEEcccccHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccHHHHHHHHHHHHccccEEccEHHHHHHHHccccccHHHHHHHHHHHHHccccEEEEEEEccEEEEEEccEEEEEcccccEEEEEEccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHcc
mstrvdigrqEVIRTTLVVIATQIlqrdpsaltckEKELKLIqsgskttvsinipqfdasftgTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLERtaqsfpnkgqyevlgfevdaintvqfsnhsgyghlkgkvitEQDFDELIEGLKMNDLMDYTHVltgycrspqLLSKIGELVKELKKanptlmyvcdpvmgdngrmyvpeevLPIYANELLSVADVICPNQFEAELltkipikdkASLLKTINVLHDRGIKTVVIssselgpekhLLGVAStvvggskttvsinipqfdasftgTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLERTaqsfpnkgsskasvpafva
mstrvdigrqevirTTLVViatqilqrdpsaltcKEKELKLiqsgskttvsiniPQFDASFTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLERTAQSFPNKGQYEVLGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLKMNDLMDYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRGIKTVVissselgpekHLLGVASTVVGGSKTTVSINIPQFDASFTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLERtaqsfpnkgsskasvpafva
MSTRVDIGRQEVIRTTLVVIATQILQRDPSALTCKEKELKLIQSGSKTTVSINIPQFDASFTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLERTAQSFPNKGQYEVLGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLKMNDLMDYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDASFTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLERTAQSFPNKGSSKASVPAFVA
******IGRQEVIRTTLVVIATQILQRDPSALTCKEKELKLIQSGSKTTVSINIPQFDASFTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLERTAQSFPNKGQYEVLGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLKMNDLMDYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDASFTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSV***********************
***R*DIGRQEVIRTTLVVIATQILQRDPSA******************VSINIPQFDASFTGTGDLFAALMLAYITRTN*****SLERTIATIQSVLERTAQSFPNKGQYEVLGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLKMNDLMDYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDASFTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLERTA*************PAFVA
MSTRVDIGRQEVIRTTLVVIATQILQRDPSALTCKEKELKLIQSGSKTTVSINIPQFDASFTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLERTAQSFPNKGQYEVLGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLKMNDLMDYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDASFTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLERTAQ*****************
*STRVDIGRQEVIRTTLVVIATQILQRDPSALTCKEKELKLIQSGSKTTVSINIPQFDASFTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLERTAQSFPNKGQYEVLGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLKMNDLMDYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDASFTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLERTAQSFPNKGSSKA*******
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSTRVDIGRQEVIRTTLVVIATQILQRDPSALTCKEKELKLIQSGSKTTVSINIPQFDASFTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLERTAQSFPNKGQYEVLGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLKMNDLMDYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDASFTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLERTAQSFPNKGSSKASVPAFVA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query360 2.2.26 [Sep-21-2011]
O00764312 Pyridoxal kinase OS=Homo yes N/A 0.675 0.778 0.430 2e-58
O46560322 Pyridoxal kinase OS=Sus s yes N/A 0.691 0.773 0.448 4e-58
Q0II59312 Pyridoxal kinase OS=Bos t yes N/A 0.694 0.801 0.442 1e-57
Q8K183312 Pyridoxal kinase OS=Mus m yes N/A 0.694 0.801 0.439 2e-57
P82197312 Pyridoxal kinase OS=Ovis N/A N/A 0.694 0.801 0.442 3e-57
O35331312 Pyridoxal kinase OS=Rattu yes N/A 0.694 0.801 0.439 2e-56
O01824321 Putative pyridoxal kinase yes N/A 0.705 0.791 0.398 6e-53
Q8W1X2309 Pyridoxal kinase OS=Arabi yes N/A 0.716 0.834 0.404 1e-50
Q55EK9302 Pyridoxal kinase OS=Dicty yes N/A 0.658 0.784 0.382 8e-40
P39988312 Putative pyridoxal kinase yes N/A 0.719 0.830 0.339 6e-35
>sp|O00764|PDXK_HUMAN Pyridoxal kinase OS=Homo sapiens GN=PDXK PE=1 SV=1 Back     alignment and function desciption
 Score =  226 bits (577), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 114/265 (43%), Positives = 173/265 (65%), Gaps = 22/265 (8%)

Query: 94  IQSVLERTAQSFPNKGQYEVLGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLK 153
           I+  +   A +FP     +VLGFE+DA+N+VQFSNH+GY H KG+V+   +  EL EGL+
Sbjct: 15  IRGYVGNRAATFP----LQVLGFEIDAVNSVQFSNHTGYAHWKGQVLNSDELQELYEGLR 70

Query: 154 MNDLMDYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDN----GRMYVPE 209
           +N++  Y +VLTGY R    L+ + ++V+ELK+ NP L+YVCDPV+GD     G MYVPE
Sbjct: 71  LNNMNKYDYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPE 130

Query: 210 EVLPIYANELLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSEL 269
           ++LP+Y  +++ +AD+I PNQFEAELL+   I  +   L+ +++LH  G  TVVI+SS+L
Sbjct: 131 DLLPVYKEKVVPLADIITPNQFEAELLSGRKIHSQEEALRVMDMLHSMGPDTVVITSSDL 190

Query: 270 GPEKHLLGVASTVVGGSKT-----------TVSINIPQFDASFTGTGDLFAALMLAYITR 318
              +   G    +V GS+             + ++I + DA F GTGDLFAA++LA+  +
Sbjct: 191 PSPQ---GSNYLIVLGSQRRRNPAGSVVMERIRMDIRKVDAVFVGTGDLFAAMLLAWTHK 247

Query: 319 TNHNVKESLERTIATIQSVLERTAQ 343
             +N+K + E+T++T+  VL+RT Q
Sbjct: 248 HPNNLKVACEKTVSTLHHVLQRTIQ 272
Required for synthesis of pyridoxal-5-phosphate from vitamin B6.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 3EC: 5
>sp|O46560|PDXK_PIG Pyridoxal kinase OS=Sus scrofa GN=PDXK PE=1 SV=1 Back     alignment and function description
>sp|Q0II59|PDXK_BOVIN Pyridoxal kinase OS=Bos taurus GN=PDXK PE=2 SV=1 Back     alignment and function description
>sp|Q8K183|PDXK_MOUSE Pyridoxal kinase OS=Mus musculus GN=Pdxk PE=1 SV=1 Back     alignment and function description
>sp|P82197|PDXK_SHEEP Pyridoxal kinase OS=Ovis aries GN=PDXK PE=1 SV=1 Back     alignment and function description
>sp|O35331|PDXK_RAT Pyridoxal kinase OS=Rattus norvegicus GN=Pdxk PE=1 SV=1 Back     alignment and function description
>sp|O01824|PDXK_CAEEL Putative pyridoxal kinase OS=Caenorhabditis elegans GN=F57C9.1 PE=2 SV=2 Back     alignment and function description
>sp|Q8W1X2|PDXK_ARATH Pyridoxal kinase OS=Arabidopsis thaliana GN=PK PE=1 SV=2 Back     alignment and function description
>sp|Q55EK9|PDXK_DICDI Pyridoxal kinase OS=Dictyostelium discoideum GN=pykA PE=1 SV=1 Back     alignment and function description
>sp|P39988|BUD16_YEAST Putative pyridoxal kinase BUD16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BUD16 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query360
112984192298 pyridoxal kinase [Bombyx mori] gi|912657 0.636 0.768 0.562 2e-71
91078322294 PREDICTED: similar to pyridoxal kinase [ 0.663 0.812 0.526 3e-70
357613612299 pyridoxal kinase [Danaus plexippus] 0.627 0.755 0.530 4e-68
443725859272 hypothetical protein CAPTEDRAFT_146242, 0.641 0.849 0.510 2e-65
196006545300 hypothetical protein TRIADDRAFT_25994 [T 0.694 0.833 0.482 2e-65
198414597308 PREDICTED: similar to Pyridoxal (pyridox 0.647 0.756 0.5 3e-63
390367899328 PREDICTED: pyridoxal kinase-like [Strong 0.65 0.713 0.470 6e-63
442754881302 Putative pyridoxal/pyridoxine/pyridoxami 0.636 0.758 0.523 2e-62
427795975337 Putative pyridoxal/pyridoxine/pyridoxami 0.630 0.673 0.506 3e-62
443708808288 hypothetical protein CAPTEDRAFT_170287 [ 0.652 0.815 0.472 4e-62
>gi|112984192|ref|NP_001037440.1| pyridoxal kinase [Bombyx mori] gi|91265776|gb|ABE28378.1| pyridoxal kinase [Bombyx mori] Back     alignment and taxonomy information
 Score =  275 bits (703), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 131/233 (56%), Positives = 180/233 (77%), Gaps = 4/233 (1%)

Query: 112 EVLGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLKMNDLMDYTHVLTGYCRSP 171
           +VLGFEVD+INTVQFS H+ Y H+KG V+      EL+EGL +N++  YTH LTGY RSP
Sbjct: 31  QVLGFEVDSINTVQFSTHTAYKHIKGYVLNNDQMKELVEGLVLNEVDYYTHFLTGYSRSP 90

Query: 172 QLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQF 231
             L +I +++K+L++ NP L+YVCDPVMGDNG+MYVPEE+LP+Y + L+ +AD++ PNQF
Sbjct: 91  DSLREIAKIIKQLREKNPNLIYVCDPVMGDNGKMYVPEEILPVYRDVLVPLADILTPNQF 150

Query: 232 EAELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVS 291
           EAEL+T IP+KD    L+ I  LHD G+KTVV+SS++LG E++++G+AST  GGS     
Sbjct: 151 EAELITGIPMKDLDGALRVIQRLHDMGVKTVVLSSTDLGDEENMIGLAST--GGS--CYK 206

Query: 292 INIPQFDASFTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLERTAQS 344
           I IP+ +A+FTGTGDLFAAL LA+   T ++VK +LE+TIAT+QS++  T Q+
Sbjct: 207 IPIPKVEATFTGTGDLFAALFLAWSHLTGNDVKLALEKTIATLQSIVVDTYQT 259

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|91078322|ref|XP_972953.1| PREDICTED: similar to pyridoxal kinase [Tribolium castaneum] gi|270003960|gb|EFA00408.1| hypothetical protein TcasGA2_TC003259 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|357613612|gb|EHJ68615.1| pyridoxal kinase [Danaus plexippus] Back     alignment and taxonomy information
>gi|443725859|gb|ELU13259.1| hypothetical protein CAPTEDRAFT_146242, partial [Capitella teleta] Back     alignment and taxonomy information
>gi|196006545|ref|XP_002113139.1| hypothetical protein TRIADDRAFT_25994 [Trichoplax adhaerens] gi|190585180|gb|EDV25249.1| hypothetical protein TRIADDRAFT_25994 [Trichoplax adhaerens] Back     alignment and taxonomy information
>gi|198414597|ref|XP_002131131.1| PREDICTED: similar to Pyridoxal (pyridoxine, vitamin B6) kinase [Ciona intestinalis] Back     alignment and taxonomy information
>gi|390367899|ref|XP_793776.3| PREDICTED: pyridoxal kinase-like [Strongylocentrotus purpuratus] Back     alignment and taxonomy information
>gi|442754881|gb|JAA69600.1| Putative pyridoxal/pyridoxine/pyridoxamine kinase [Ixodes ricinus] Back     alignment and taxonomy information
>gi|427795975|gb|JAA63439.1| Putative pyridoxal/pyridoxine/pyridoxamine kinase, partial [Rhipicephalus pulchellus] Back     alignment and taxonomy information
>gi|443708808|gb|ELU03774.1| hypothetical protein CAPTEDRAFT_170287 [Capitella teleta] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query360
FB|FBgn0085484304 CG34455 [Drosophila melanogast 0.733 0.868 0.434 4.6e-57
ZFIN|ZDB-GENE-030131-8376340 pdxka "pyridoxal (pyridoxine, 0.636 0.673 0.483 3.7e-55
ZFIN|ZDB-GENE-030616-521319 pdxkb "pyridoxal (pyridoxine, 0.697 0.786 0.438 6.1e-55
UNIPROTKB|O00764312 PDXK "Pyridoxal kinase" [Homo 0.683 0.788 0.438 3e-53
UNIPROTKB|Q0II59312 PDXK "Pyridoxal kinase" [Bos t 0.722 0.833 0.429 3e-53
UNIPROTKB|O46560322 PDXK "Pyridoxal kinase" [Sus s 0.722 0.807 0.440 3e-53
RGD|1566085312 RGD1566085 "similar to pyridox 0.683 0.788 0.451 8e-53
UNIPROTKB|J9P5E0285 PDXK "Uncharacterized protein" 0.638 0.807 0.462 2.1e-52
WB|WBGene00019008331 F57C9.1 [Caenorhabditis elegan 0.705 0.767 0.414 2.1e-52
MGI|MGI:1351869312 Pdxk "pyridoxal (pyridoxine, v 0.683 0.788 0.440 3.5e-52
FB|FBgn0085484 CG34455 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
 Identities = 120/276 (43%), Positives = 185/276 (67%)

Query:    79 TNHNVKESLERTIATIQSVLERTAQSFPNKGQYEVLGFEVDAINTVQFSNHSGYGHLKGK 138
             TN ++K  L      +   +     ++P     ++LGF+VD +N+VQFSNH+GY   KG 
Sbjct:     5 TNADIKRVLSIQSHVVHGYVGNKVATYP----LQLLGFDVDPLNSVQFSNHTGYKTFKGP 60

Query:   139 VITEQDFDELIEGLKMNDLMD-YTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDP 197
             V  E++   + EGL+ N+L+  Y+H+LTGY  +P  L ++G ++K+L++ANP L+YVCDP
Sbjct:    61 VSNEKELATIFEGLEENELLPLYSHLLTGYIGNPLFLRQVGHILKKLRQANPGLVYVCDP 120

Query:   198 VMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHDR 257
             VMGDNG++YVP+E+LP+Y +E++ +AD+I PNQFE ELLT+  ++ +A++ + +   H R
Sbjct:   121 VMGDNGQLYVPKELLPVYRDEIIPLADIITPNQFEVELLTEKEVRSEAAVWEAMEWFHQR 180

Query:   258 GIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQF---DASFTGTGDLFAALMLA 314
             GIKTVVISSS+LG    L    S   G     ++I+IP+    D  FTGTGDLFA+L LA
Sbjct:   181 GIKTVVISSSDLGQPGVLRAFLSQQNG---PRLAIDIPKQGGKDLVFTGTGDLFASLFLA 237

Query:   315 YITRTNHNVKESLERTIATIQSVLERTAQSFPNKGS 350
             + +  + ++    E+TIA++Q+V++RT  S PN G+
Sbjct:   238 H-SHGSKDIANVFEKTIASLQAVIKRTVASLPNGGN 272
GO:0008478 "pyridoxal kinase activity" evidence=IEA
GO:0009443 "pyridoxal 5'-phosphate salvage" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISS
ZFIN|ZDB-GENE-030131-8376 pdxka "pyridoxal (pyridoxine, vitamin B6) kinase a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030616-521 pdxkb "pyridoxal (pyridoxine, vitamin B6) kinase b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|O00764 PDXK "Pyridoxal kinase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q0II59 PDXK "Pyridoxal kinase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O46560 PDXK "Pyridoxal kinase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|1566085 RGD1566085 "similar to pyridoxal (pyridoxine, vitamin B6) kinase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|J9P5E0 PDXK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
WB|WBGene00019008 F57C9.1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
MGI|MGI:1351869 Pdxk "pyridoxal (pyridoxine, vitamin B6) kinase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A3N2D3PDXY_ACTP22, ., 7, ., 1, ., 3, 50.31830.650.8181yesN/A
A5UA83PDXY_HAEIE2, ., 7, ., 1, ., 3, 50.30450.61110.7638yesN/A
Q1AYE5PDXY_RUBXD2, ., 7, ., 1, ., 3, 50.31700.64440.8yesN/A
Q8W1X2PDXK_ARATH2, ., 7, ., 1, ., 3, 50.40450.71660.8349yesN/A
Q1J237PDXY_DEIGD2, ., 7, ., 1, ., 3, 50.34070.68330.8227yesN/A
P44690PDXY_HAEIN2, ., 7, ., 1, ., 3, 50.30450.61110.7638yesN/A
O00764PDXK_HUMAN2, ., 7, ., 1, ., 3, 50.43010.6750.7788yesN/A
Q0I3D2PDXY_HAES12, ., 7, ., 1, ., 3, 50.30550.61380.7727yesN/A
A6VEZ4PDXY_PSEA72, ., 7, ., 1, ., 3, 50.30630.61660.7708yesN/A
B2JCI0PDXY_BURP82, ., 7, ., 1, ., 3, 50.30520.63050.7909yesN/A
Q4K3F6PDXY_PSEF52, ., 7, ., 1, ., 3, 50.31140.65270.8103yesN/A
Q55EK9PDXK_DICDI2, ., 7, ., 1, ., 3, 50.38240.65830.7847yesN/A
Q5E345PDXY_VIBF12, ., 7, ., 1, ., 3, 50.35310.6250.7785yesN/A
O14242YELB_SCHPO2, ., 7, ., 1, ., 3, 50.35930.64440.7508yesN/A
B3H2H2PDXY_ACTP72, ., 7, ., 1, ., 3, 50.31420.650.8181yesN/A
Q0II59PDXK_BOVIN2, ., 7, ., 1, ., 3, 50.44280.69440.8012yesN/A
Q3K4B8PDXY_PSEPF2, ., 7, ., 1, ., 3, 50.31420.650.8068yesN/A
A7N5Q6PDXY_VIBHB2, ., 7, ., 1, ., 3, 50.31140.60550.7543yesN/A
Q48BL6PDXY_PSE142, ., 7, ., 1, ., 3, 50.32110.64720.8090yesN/A
B0UUD2PDXY_HAES22, ., 7, ., 1, ., 3, 50.30550.61380.7727yesN/A
Q9CNY1PDXY_PASMU2, ., 7, ., 1, ., 3, 50.30360.63880.8041yesN/A
Q6LP62PDXY_PHOPR2, ., 7, ., 1, ., 3, 50.30410.61110.7560yesN/A
Q0BSF0PDXY_GRABC2, ., 7, ., 1, ., 3, 50.32110.61940.7797yesN/A
Q6NG19PDXY_CORDI2, ., 7, ., 1, ., 3, 50.30860.6250.7950yesN/A
Q6D5V1PDXY_ERWCT2, ., 7, ., 1, ., 3, 50.30520.62220.7832yesN/A
Q8K183PDXK_MOUSE2, ., 7, ., 1, ., 3, 50.43910.69440.8012yesN/A
Q87TZ6PDXY_PSESM2, ., 7, ., 1, ., 3, 50.31020.650.8125yesN/A
Q7MGA4PDXY_VIBVY2, ., 7, ., 1, ., 3, 50.31550.60550.7517yesN/A
Q66A50PDXY_YERPS2, ., 7, ., 1, ., 3, 50.31070.64720.8146yesN/A
Q6AFC1PDXY_LEIXX2, ., 7, ., 1, ., 3, 50.30040.63330.8056yesN/A
O46560PDXK_PIG2, ., 7, ., 1, ., 3, 50.44810.69160.7732yesN/A
O35331PDXK_RAT2, ., 7, ., 1, ., 3, 50.43910.69440.8012yesN/A
Q141E8PDXY_BURXL2, ., 7, ., 1, ., 3, 50.30030.64160.8020yesN/A
C3K4G7PDXY_PSEFS2, ., 7, ., 1, ., 3, 50.30610.650.8068yesN/A
Q8D4Q2PDXY_VIBVU2, ., 7, ., 1, ., 3, 50.31550.60550.7517yesN/A
O01824PDXK_CAEEL2, ., 7, ., 1, ., 3, 50.39840.70550.7912yesN/A
P39988BUD16_YEAST2, ., 7, ., 1, ., 3, 50.33920.71940.8301yesN/A
Q9RYX0PDXY_DEIRA2, ., 7, ., 1, ., 3, 50.31130.70270.8489yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.10.766
3rd Layer2.7.1.35LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query360
PTZ00344296 PTZ00344, PTZ00344, pyridoxal kinase; Provisional 6e-87
cd01173254 cd01173, pyridoxal_pyridoxamine_kinase, Pyridoxal 1e-84
PLN02978308 PLN02978, PLN02978, pyridoxal kinase 2e-81
COG2240281 COG2240, PdxK, Pyridoxal/pyridoxine/pyridoxamine k 1e-67
TIGR00687286 TIGR00687, pyridox_kin, pyridoxal kinase 4e-63
PRK05756286 PRK05756, PRK05756, pyridoxamine kinase; Validated 4e-51
PRK08176281 PRK08176, pdxK, pyridoxal-pyridoxamine kinase/hydr 5e-23
PRK07105284 PRK07105, PRK07105, pyridoxamine kinase; Validated 1e-17
COG0351263 COG0351, ThiD, Hydroxymethylpyrimidine/phosphometh 4e-12
PTZ00344296 PTZ00344, PTZ00344, pyridoxal kinase; Provisional 5e-11
TIGR00097254 TIGR00097, HMP-P_kinase, phosphomethylpyrimidine k 2e-10
PRK11142306 PRK11142, PRK11142, ribokinase; Provisional 4e-10
cd01169242 cd01169, HMPP_kinase, 4-amino-5-hydroxymethyl-2-me 8e-10
pfam08543246 pfam08543, Phos_pyr_kin, Phosphomethylpyrimidine k 1e-09
TIGR02152293 TIGR02152, D_ribokin_bact, ribokinase 2e-09
pfam00294298 pfam00294, PfkB, pfkB family carbohydrate kinase 2e-09
PLN02978308 PLN02978, PLN02978, pyridoxal kinase 7e-09
cd00287196 cd00287, ribokinase_pfkB_like, ribokinase/pfkB sup 8e-09
cd01174292 cd01174, ribokinase, Ribokinase catalyses the phos 1e-08
cd01173254 cd01173, pyridoxal_pyridoxamine_kinase, Pyridoxal 6e-08
PRK06427266 PRK06427, PRK06427, bifunctional hydroxy-methylpyr 7e-08
PTZ00292326 PTZ00292, PTZ00292, ribokinase; Provisional 7e-06
cd01941288 cd01941, YeiC_kinase_like, YeiC-like sugar kinase 9e-06
PRK12413253 PRK12413, PRK12413, phosphomethylpyrimidine kinase 2e-05
COG2240281 COG2240, PdxK, Pyridoxal/pyridoxine/pyridoxamine k 3e-05
TIGR00687286 TIGR00687, pyridox_kin, pyridoxal kinase 2e-04
PRK05756286 PRK05756, PRK05756, pyridoxamine kinase; Validated 2e-04
COG0524311 COG0524, RbsK, Sugar kinases, ribokinase family [C 5e-04
cd01172304 cd01172, RfaE_like, RfaE encodes a bifunctional AD 7e-04
PRK12616270 PRK12616, PRK12616, pyridoxal kinase; Reviewed 0.002
PRK08573 448 PRK08573, PRK08573, phosphomethylpyrimidine kinase 0.003
>gnl|CDD|240372 PTZ00344, PTZ00344, pyridoxal kinase; Provisional Back     alignment and domain information 
 Score =  264 bits (676), Expect = 6e-87
 Identities = 109/280 (38%), Positives = 172/280 (61%), Gaps = 21/280 (7%)

Query: 86  SLERTIATIQS------VLERTAQSFPNKGQYEVLGFEVDAINTVQFSNHSGYGHLKGKV 139
           S+E+ + +IQS      V  R A +FP     ++LGF+VD +NTVQ SNH+GY  +KG  
Sbjct: 2   SMEKKVLSIQSHVTHGYVGNRAA-TFP----LQLLGFDVDFVNTVQLSNHTGYPVIKGHR 56

Query: 140 ITEQDFDELIEGLKMNDLM-DYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPV 198
           +   +   L++GL+ N+L+ DYT+VLTGY  S  +L ++   VKE+K+  P L+++CDPV
Sbjct: 57  LDLNELITLMDGLRANNLLSDYTYVLTGYINSADILREVLATVKEIKELRPKLIFLCDPV 116

Query: 199 MGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRG 258
           MGD+G++YV EEV+  Y  EL+  ADVI PNQFEA LL+ + +KD +  L+ I+  H++G
Sbjct: 117 MGDDGKLYVKEEVVDAY-RELIPYADVITPNQFEASLLSGVEVKDLSDALEAIDWFHEQG 175

Query: 259 IKTVVISSSELGPEK-HLLGVASTVVGGSKTTV--SINIPQFDASFTGTGDLFAALMLAY 315
           I  VVI+S     +  HL  + S     +K     +  +P  +  +TGTGDLFAAL+LA+
Sbjct: 176 IPVVVITSFREDEDPTHLRFLLSCRDKDTKNNKRFTGKVPYIEGRYTGTGDLFAALLLAF 235

Query: 316 ITRTNHNVKESLERTIATIQSVLERTAQSFPNKGSSKASV 355
             +  H +  ++ + +  +Q +++ T     + GS  +S+
Sbjct: 236 SHQ--HPMDLAVGKAMGVLQDIIKAT---RESGGSGSSSL 270

Length = 296
>gnl|CDD|238578 cd01173, pyridoxal_pyridoxamine_kinase, Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP Back     alignment and domain information
>gnl|CDD|215529 PLN02978, PLN02978, pyridoxal kinase Back     alignment and domain information
>gnl|CDD|225149 COG2240, PdxK, Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|211599 TIGR00687, pyridox_kin, pyridoxal kinase Back     alignment and domain information
>gnl|CDD|235592 PRK05756, PRK05756, pyridoxamine kinase; Validated Back     alignment and domain information
>gnl|CDD|181269 PRK08176, pdxK, pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed Back     alignment and domain information
>gnl|CDD|180840 PRK07105, PRK07105, pyridoxamine kinase; Validated Back     alignment and domain information
>gnl|CDD|223428 COG0351, ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|240372 PTZ00344, PTZ00344, pyridoxal kinase; Provisional Back     alignment and domain information
>gnl|CDD|232823 TIGR00097, HMP-P_kinase, phosphomethylpyrimidine kinase Back     alignment and domain information
>gnl|CDD|236858 PRK11142, PRK11142, ribokinase; Provisional Back     alignment and domain information
>gnl|CDD|238574 cd01169, HMPP_kinase, 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1 Back     alignment and domain information
>gnl|CDD|219893 pfam08543, Phos_pyr_kin, Phosphomethylpyrimidine kinase Back     alignment and domain information
>gnl|CDD|233751 TIGR02152, D_ribokin_bact, ribokinase Back     alignment and domain information
>gnl|CDD|215842 pfam00294, PfkB, pfkB family carbohydrate kinase Back     alignment and domain information
>gnl|CDD|215529 PLN02978, PLN02978, pyridoxal kinase Back     alignment and domain information
>gnl|CDD|238177 cd00287, ribokinase_pfkB_like, ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group Back     alignment and domain information
>gnl|CDD|238579 cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP Back     alignment and domain information
>gnl|CDD|238578 cd01173, pyridoxal_pyridoxamine_kinase, Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP Back     alignment and domain information
>gnl|CDD|180561 PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed Back     alignment and domain information
>gnl|CDD|185541 PTZ00292, PTZ00292, ribokinase; Provisional Back     alignment and domain information
>gnl|CDD|238916 cd01941, YeiC_kinase_like, YeiC-like sugar kinase Back     alignment and domain information
>gnl|CDD|183513 PRK12413, PRK12413, phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>gnl|CDD|225149 COG2240, PdxK, Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|211599 TIGR00687, pyridox_kin, pyridoxal kinase Back     alignment and domain information
>gnl|CDD|235592 PRK05756, PRK05756, pyridoxamine kinase; Validated Back     alignment and domain information
>gnl|CDD|223598 COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|238577 cd01172, RfaE_like, RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose Back     alignment and domain information
>gnl|CDD|183624 PRK12616, PRK12616, pyridoxal kinase; Reviewed Back     alignment and domain information
>gnl|CDD|236297 PRK08573, PRK08573, phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 360
KOG2599|consensus308 100.0
COG2240281 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coe 100.0
COG0351263 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidi 100.0
PRK08176281 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpy 100.0
PRK05756286 pyridoxamine kinase; Validated 100.0
PLN02978308 pyridoxal kinase 100.0
TIGR00687286 pyridox_kin pyridoxal kinase. ThiD and related pro 100.0
PTZ00344296 pyridoxal kinase; Provisional 100.0
PF08543246 Phos_pyr_kin: Phosphomethylpyrimidine kinase; Inte 100.0
PRK12412268 pyridoxal kinase; Reviewed 100.0
PRK12616270 pyridoxal kinase; Reviewed 100.0
PRK07105284 pyridoxamine kinase; Validated 100.0
TIGR00097254 HMP-P_kinase phosphomethylpyrimidine kinase. This 100.0
PTZ00493321 phosphomethylpyrimidine kinase; Provisional 100.0
PRK06427266 bifunctional hydroxy-methylpyrimidine kinase/ hydr 100.0
cd01173254 pyridoxal_pyridoxamine_kinase Pyridoxal kinase pla 99.98
cd01169242 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrim 99.97
PLN02898 502 HMP-P kinase/thiamin-monophosphate pyrophosphoryla 99.96
PTZ00347504 phosphomethylpyrimidine kinase; Provisional 99.96
PRK14713 530 multifunctional hydroxymethylpyrimidine phosphokin 99.96
PRK08573 448 phosphomethylpyrimidine kinase; Provisional 99.96
PRK09517 755 multifunctional thiamine-phosphate pyrophosphoryla 99.96
KOG2598|consensus 523 99.96
PRK12413253 phosphomethylpyrimidine kinase; Provisional 99.95
COG1105310 FruK Fructose-1-phosphate kinase and related fruct 99.89
cd01171254 YXKO-related B.subtilis YXKO protein of unknown fu 99.87
cd01174292 ribokinase Ribokinase catalyses the phosphorylatio 99.82
TIGR00196272 yjeF_cterm yjeF C-terminal region, hydroxyethylthi 99.82
PRK11142306 ribokinase; Provisional 99.82
TIGR03828304 pfkB 1-phosphofructokinase. This enzyme acts in co 99.81
PTZ00292326 ribokinase; Provisional 99.81
PRK13508309 tagatose-6-phosphate kinase; Provisional 99.81
cd01166294 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phospho 99.81
PRK10294309 6-phosphofructokinase 2; Provisional 99.8
TIGR03168303 1-PFK hexose kinase, 1-phosphofructokinase family. 99.8
TIGR02152293 D_ribokin_bact ribokinase. This model describes ri 99.8
cd01164289 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 99.8
PRK09513312 fruK 1-phosphofructokinase; Provisional 99.79
PTZ00247345 adenosine kinase; Provisional 99.78
PRK09850313 pseudouridine kinase; Provisional 99.77
cd01168312 adenosine_kinase Adenosine kinase (AK) catalyzes t 99.77
PRK09954362 putative kinase; Provisional 99.77
cd01172304 RfaE_like RfaE encodes a bifunctional ADP-heptose 99.77
TIGR01231309 lacC tagatose-6-phosphate kinase. This enzyme is p 99.76
TIGR02198315 rfaE_dom_I rfaE bifunctional protein, domain I. Rf 99.76
PLN02341470 pfkB-type carbohydrate kinase family protein 99.75
PLN02323330 probable fructokinase 99.75
PLN02967581 kinase 99.75
cd01944289 YegV_kinase_like YegV-like sugar kinase. Found onl 99.75
cd01167295 bac_FRK Fructokinases (FRKs) mainly from bacteria 99.74
cd01941288 YeiC_kinase_like YeiC-like sugar kinase. Found in 99.74
TIGR00694249 thiM hydroxyethylthiazole kinase. This model repre 99.74
PLN02813426 pfkB-type carbohydrate kinase family protein 99.74
cd01170242 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (T 99.72
PF00294301 PfkB: pfkB family carbohydrate kinase; InterPro: I 99.72
PRK09434304 aminoimidazole riboside kinase; Provisional 99.72
cd01945284 ribokinase_group_B Ribokinase-like subgroup B. Fou 99.71
PLN02379367 pfkB-type carbohydrate kinase family protein 99.7
PRK15074434 inosine/guanosine kinase; Provisional 99.69
COG0063284 Predicted sugar kinase [Carbohydrate transport and 99.69
cd01940264 Fructoselysine_kinase_like Fructoselysine kinase-l 99.69
PRK11316 473 bifunctional heptose 7-phosphate kinase/heptose 1- 99.68
PLN02543496 pfkB-type carbohydrate kinase family protein 99.68
PLN02548332 adenosine kinase 99.67
COG0524311 RbsK Sugar kinases, ribokinase family [Carbohydrat 99.67
PRK10565508 putative carbohydrate kinase; Provisional 99.66
cd01946277 ribokinase_group_C Ribokinase-like subgroup C. Fou 99.64
PRK09355263 hydroxyethylthiazole kinase; Validated 99.64
cd00287196 ribokinase_pfkB_like ribokinase/pfkB superfamily: 99.63
cd01943328 MAK32 MAK32 kinase. MAK32 is a protein found prima 99.62
cd01942279 ribokinase_group_A Ribokinase-like subgroup A. Fou 99.6
PRK09813260 fructoselysine 6-kinase; Provisional 99.6
cd01947265 Guanosine_kinase_like Guanosine kinase-like sugar 99.58
cd01937254 ribokinase_group_D Ribokinase-like subgroup D. Fou 99.58
PF01256242 Carb_kinase: Carbohydrate kinase; InterPro: IPR000 99.57
cd01939290 Ketohexokinase Ketohexokinase (fructokinase, KHK) 99.56
KOG2855|consensus330 99.51
COG2870 467 RfaE ADP-heptose synthase, bifunctional sugar kina 99.49
PLN02630335 pfkB-type carbohydrate kinase family protein 99.44
KOG2599|consensus308 99.42
KOG2854|consensus343 99.4
COG2145265 ThiM Hydroxyethylthiazole kinase, sugar kinase fam 99.34
KOG3974|consensus306 99.28
PF02110246 HK: Hydroxyethylthiazole kinase family; InterPro: 99.2
KOG2947|consensus308 98.69
KOG3009|consensus614 97.91
COG2240281 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coe 96.91
PF08543246 Phos_pyr_kin: Phosphomethylpyrimidine kinase; Inte 96.32
PLN02978308 pyridoxal kinase 95.32
PTZ00344296 pyridoxal kinase; Provisional 93.42
PRK08176281 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpy 92.48
PRK14039453 ADP-dependent glucokinase; Provisional 90.96
PRK03979463 ADP-specific phosphofructokinase; Provisional 86.42
PRK05756286 pyridoxamine kinase; Validated 85.46
PRK07105284 pyridoxamine kinase; Validated 82.8
TIGR02045446 P_fruct_ADP ADP-specific phosphofructokinase. Phos 82.19
>KOG2599|consensus Back     alignment and domain information 
Probab=100.00  E-value=8.2e-41  Score=295.94  Aligned_cols=258  Identities=43%  Similarity=0.805  Sum_probs=233.9

Q ss_pred             cccccceeeecccccc-----cccccCCchhhhhcCeeeeeeeeeeecCCCCCCccccccCCHHHHHHHHHHhhhCCCCc
Q psy11349         85 ESLERTIATIQSVLER-----TAQSFPNKGQYEVLGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLKMNDLMD  159 (360)
Q Consensus        85 ~~~~~~vl~I~~~~~~-----~~~~~~~~~~l~~~G~~~~~i~t~~~s~~~~~~~~~g~~l~~~~l~~ll~~~~~~~~~~  159 (360)
                      ...+++||+||+++.+     .+++||    ||..|+++++++++++|||+||..+.|..++++++.++++.+..+++..
T Consensus         6 ~~~~kRVLSIQShVvhGYVGNkaAtFP----LQllGwdVD~insVqFSNHtGY~~~kG~~~~~~eL~dL~egl~~nn~~~   81 (308)
T KOG2599|consen    6 METTKRVLSIQSHVVHGYVGNKAATFP----LQLLGWDVDVINSVQFSNHTGYAHVKGQVLNEEELEDLYEGLLLNNLNK   81 (308)
T ss_pred             ccCCccEEEEeeeeeeeeccccccccc----hhhhccccccccceeeccccCCccccccccCHHHHHHHHHHHhhccccc
Confidence            3457899999999876     899999    9999999999999999999999999999999999999999998887778


Q ss_pred             cCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhccCC
Q psy11349        160 YTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTKI  239 (360)
Q Consensus       160 ~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~g~  239 (360)
                      ++++++||+++...++.+.++++++|+.||++.+||||||+|.|++|++++.+..|++.+.+.+|+||||++|++.|+|+
T Consensus        82 Y~~vLTGY~~n~~~l~~i~~iv~~lk~~np~~~wv~DPVmGDnG~lYV~eelipvYr~~i~~ladiiTPNqFE~EiLtg~  161 (308)
T KOG2599|consen   82 YDAVLTGYLPNVSFLQKIADIVKKLKKKNPNLTWVCDPVMGDNGRLYVPEELIPVYRDLIIPLADIITPNQFEAEILTGM  161 (308)
T ss_pred             cceeeeeccCChhHHHHHHHHHHHHHhcCCCeEEEeCccccCCccEeccHHHHHHHHHhhcchhhhcCCcchhhhhhcCC
Confidence            99999999999999999999999999999999999999999999999999999999988888899999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHhcCCCEEEEeccccCCC-c-eEEEEEeeeccCCceEEEEEecccCCcccCchHHHHHHHHHHHH
Q psy11349        240 PIKDKASLLKTINVLHDRGIKTVVISSSELGPE-K-HLLGVASTVVGGSKTTVSINIPQFDASFTGTGDLFAALMLAYIT  317 (360)
Q Consensus       240 ~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~-g-~~~~~~~~~~~~~~~~~~~~~~~v~~~t~GaGD~f~a~~~a~L~  317 (360)
                      .+.+.++..++++.|+++|++.|+||+..+|+. | .+.+..+..   +.+.+.+..|+++..++|+||.|+|.+++.+.
T Consensus       162 ~I~t~eda~~a~~~lhq~~v~~vVITS~~~~~~~g~~l~c~gs~~---~~~~f~~~ipki~~~FtGTGDLfsaLLla~~~  238 (308)
T KOG2599|consen  162 EIRTEEDAKRAVEKLHQKGVKTVVITSFDLGEFTGETLRCIGSSC---GSERFRYLIPKIDGVFTGTGDLFSALLLAWLH  238 (308)
T ss_pred             eeccHHHHHHHHHHHHHhCCCEEEEEeeeeCCCCCcEEEEEEecc---CCceEEEEecccceEEecccHHHHHHHHHHHh
Confidence            999999999999999999999999998877765 5 344554422   15678888899999999999999999999998


Q ss_pred             cCC---CCHHHHHHHHHHHHHHHHHHHHhhCCCCCC
Q psy11349        318 RTN---HNVKESLERTIATIQSVLERTAQSFPNKGS  350 (360)
Q Consensus       318 ~~g---~~l~~A~~~A~a~~~~~l~~t~~~~~~~~~  350 (360)
                      + .   .++..|++.+.+.++.+|++|.+.....+.
T Consensus       239 ~-~~~~~~l~~a~e~~ls~~~~viqkT~~~~~~~~~  273 (308)
T KOG2599|consen  239 E-SPDNDDLSKAVEQVLSSVQAVIQKTLDYAKAQGG  273 (308)
T ss_pred             c-CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            7 4   689999999999999999999987654444

>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism] Back     alignment and domain information
>COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism] Back     alignment and domain information
>PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed Back     alignment and domain information
>PRK05756 pyridoxamine kinase; Validated Back     alignment and domain information
>PLN02978 pyridoxal kinase Back     alignment and domain information
>TIGR00687 pyridox_kin pyridoxal kinase Back     alignment and domain information
>PTZ00344 pyridoxal kinase; Provisional Back     alignment and domain information
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2 Back     alignment and domain information
>PRK12412 pyridoxal kinase; Reviewed Back     alignment and domain information
>PRK12616 pyridoxal kinase; Reviewed Back     alignment and domain information
>PRK07105 pyridoxamine kinase; Validated Back     alignment and domain information
>TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase Back     alignment and domain information
>PTZ00493 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed Back     alignment and domain information
>cd01173 pyridoxal_pyridoxamine_kinase Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP Back     alignment and domain information
>cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1 Back     alignment and domain information
>PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase Back     alignment and domain information
>PTZ00347 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional Back     alignment and domain information
>PRK08573 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>KOG2598|consensus Back     alignment and domain information
>PRK12413 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd01171 YXKO-related B Back     alignment and domain information
>cd01174 ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP Back     alignment and domain information
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related Back     alignment and domain information
>PRK11142 ribokinase; Provisional Back     alignment and domain information
>TIGR03828 pfkB 1-phosphofructokinase Back     alignment and domain information
>PTZ00292 ribokinase; Provisional Back     alignment and domain information
>PRK13508 tagatose-6-phosphate kinase; Provisional Back     alignment and domain information
>cd01166 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) Back     alignment and domain information
>PRK10294 6-phosphofructokinase 2; Provisional Back     alignment and domain information
>TIGR03168 1-PFK hexose kinase, 1-phosphofructokinase family Back     alignment and domain information
>TIGR02152 D_ribokin_bact ribokinase Back     alignment and domain information
>cd01164 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases Back     alignment and domain information
>PRK09513 fruK 1-phosphofructokinase; Provisional Back     alignment and domain information
>PTZ00247 adenosine kinase; Provisional Back     alignment and domain information
>PRK09850 pseudouridine kinase; Provisional Back     alignment and domain information
>cd01168 adenosine_kinase Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor Back     alignment and domain information
>PRK09954 putative kinase; Provisional Back     alignment and domain information
>cd01172 RfaE_like RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose Back     alignment and domain information
>TIGR01231 lacC tagatose-6-phosphate kinase Back     alignment and domain information
>TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I Back     alignment and domain information
>PLN02341 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>PLN02323 probable fructokinase Back     alignment and domain information
>PLN02967 kinase Back     alignment and domain information
>cd01944 YegV_kinase_like YegV-like sugar kinase Back     alignment and domain information
>cd01167 bac_FRK Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate Back     alignment and domain information
>cd01941 YeiC_kinase_like YeiC-like sugar kinase Back     alignment and domain information
>TIGR00694 thiM hydroxyethylthiazole kinase Back     alignment and domain information
>PLN02813 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>cd01170 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz Back     alignment and domain information
>PF00294 PfkB: pfkB family carbohydrate kinase; InterPro: IPR011611 This entry includes a variety of carbohydrate and pyrimidine kinases Back     alignment and domain information
>PRK09434 aminoimidazole riboside kinase; Provisional Back     alignment and domain information
>cd01945 ribokinase_group_B Ribokinase-like subgroup B Back     alignment and domain information
>PLN02379 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>PRK15074 inosine/guanosine kinase; Provisional Back     alignment and domain information
>COG0063 Predicted sugar kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd01940 Fructoselysine_kinase_like Fructoselysine kinase-like Back     alignment and domain information
>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional Back     alignment and domain information
>PLN02543 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>PLN02548 adenosine kinase Back     alignment and domain information
>COG0524 RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10565 putative carbohydrate kinase; Provisional Back     alignment and domain information
>cd01946 ribokinase_group_C Ribokinase-like subgroup C Back     alignment and domain information
>PRK09355 hydroxyethylthiazole kinase; Validated Back     alignment and domain information
>cd00287 ribokinase_pfkB_like ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group Back     alignment and domain information
>cd01943 MAK32 MAK32 kinase Back     alignment and domain information
>cd01942 ribokinase_group_A Ribokinase-like subgroup A Back     alignment and domain information
>PRK09813 fructoselysine 6-kinase; Provisional Back     alignment and domain information
>cd01947 Guanosine_kinase_like Guanosine kinase-like sugar kinases Back     alignment and domain information
>cd01937 ribokinase_group_D Ribokinase-like subgroup D Back     alignment and domain information
>PF01256 Carb_kinase: Carbohydrate kinase; InterPro: IPR000631 This family is related to Hydroxyethylthiazole kinase IPR000417 from INTERPRO and PfkB carbohydrate kinase IPR011611 from INTERPRO implying that it also a carbohydrate kinase Back     alignment and domain information
>cd01939 Ketohexokinase Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose Back     alignment and domain information
>KOG2855|consensus Back     alignment and domain information
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PLN02630 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>KOG2599|consensus Back     alignment and domain information
>KOG2854|consensus Back     alignment and domain information
>COG2145 ThiM Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism] Back     alignment and domain information
>KOG3974|consensus Back     alignment and domain information
>PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium [] Back     alignment and domain information
>KOG2947|consensus Back     alignment and domain information
>KOG3009|consensus Back     alignment and domain information
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism] Back     alignment and domain information
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2 Back     alignment and domain information
>PLN02978 pyridoxal kinase Back     alignment and domain information
>PTZ00344 pyridoxal kinase; Provisional Back     alignment and domain information
>PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed Back     alignment and domain information
>PRK14039 ADP-dependent glucokinase; Provisional Back     alignment and domain information
>PRK03979 ADP-specific phosphofructokinase; Provisional Back     alignment and domain information
>PRK05756 pyridoxamine kinase; Validated Back     alignment and domain information
>PRK07105 pyridoxamine kinase; Validated Back     alignment and domain information
>TIGR02045 P_fruct_ADP ADP-specific phosphofructokinase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query360
2f7k_A327 Crystal Structure Of Human Pyridoxal Kinase Length 1e-59
2ajp_A326 Crystal Structure Of A Human Pyridoxal Kinase Lengt 1e-59
2yxt_A312 Human Pyridoxal Kinase Length = 312 1e-59
3fhy_A312 Crystal Structure Of D235n Mutant Of Human Pyridoxa 5e-59
3fhx_A312 Crystal Structure Of D235a Mutant Of Human Pyridoxa 1e-58
1lhp_A312 Crystal Structure Of Pyridoxal Kinase From Sheep Br 2e-58
3zs7_A300 Crystal Structure Of Pyridoxal Kinase From Trypanos 7e-40
3pzs_A289 Crystal Structure Of A Pyridoxamine Kinase From Yer 1e-19
1td2_A287 Crystal Structure Of The Pdxy Protein From Escheric 5e-16
3mbj_A291 Crystal Structure Of A Putative Phosphomethylpyrimi 1e-15
1vi9_A299 Crystal Structure Of Pyridoxamine Kinase Length = 2 2e-15
2ddm_A283 Crystal Structure Of Pyridoxal Kinase From The Esch 5e-15
3ry7_A304 Crystal Sructure Of Sa239 Length = 304 1e-06
1rk2_A309 E. Coli Ribokinase Complexed With Ribose And Adp, S 1e-06
3h74_A282 Crystal Structure Of Pyridoxal Kinase From Lactobac 2e-04
>pdb|2F7K|A Chain A, Crystal Structure Of Human Pyridoxal Kinase Length = 327 Back     alignment and structure 
Iteration: 1

 Score =  227 bits (578), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 114/265 (43%), Positives = 173/265 (65%), Gaps = 22/265 (8%)
Query: 94  IQSVLERTAQSFPNKGQYEVLGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLK 153
           I+  +   A +FP     +VLGFE+DA+N+VQFSNH+GY H KG+V+   +  EL EGL+
Sbjct: 30  IRGYVGNRAATFP----LQVLGFEIDAVNSVQFSNHTGYAHWKGQVLNSDELQELYEGLR 85
Query: 154 MNDLMDYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDN----GRMYVPE 209
           +N++  Y +VLTGY R    L+ + ++V+ELK+ NP L+YVCDPV+GD     G MYVPE
Sbjct: 86  LNNMNKYDYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPE 145
Query: 210 EVLPIYANELLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSEL 269
           ++LP+Y  +++ +AD+I PNQFEAELL+   I  +   L+ +++LH  G  TVVI+SS+L
Sbjct: 146 DLLPVYKEKVVPLADIITPNQFEAELLSGRKIHSQEEALRVMDMLHSMGPDTVVITSSDL 205
Query: 270 GPEKHLLGVASTVVGGSKT-----------TVSINIPQFDASFTGTGDLFAALMLAYITR 318
              +   G    +V GS+             + ++I + DA F GTGDLFAA++LA+  +
Sbjct: 206 PSPQ---GSNYLIVLGSQRRRNPAGSVVMERIRMDIRKVDAVFVGTGDLFAAMLLAWTHK 262
Query: 319 TNHNVKESLERTIATIQSVLERTAQ 343
             +N+K + E+T++T+  VL+RT Q
Sbjct: 263 HPNNLKVACEKTVSTLHHVLQRTIQ 287
>pdb|2AJP|A Chain A, Crystal Structure Of A Human Pyridoxal Kinase Length = 326 Back     alignment and structure
>pdb|2YXT|A Chain A, Human Pyridoxal Kinase Length = 312 Back     alignment and structure
>pdb|3FHY|A Chain A, Crystal Structure Of D235n Mutant Of Human Pyridoxal Kinase Length = 312 Back     alignment and structure
>pdb|3FHX|A Chain A, Crystal Structure Of D235a Mutant Of Human Pyridoxal Kinase Length = 312 Back     alignment and structure
>pdb|1LHP|A Chain A, Crystal Structure Of Pyridoxal Kinase From Sheep Brain Length = 312 Back     alignment and structure
>pdb|3ZS7|A Chain A, Crystal Structure Of Pyridoxal Kinase From Trypanosoma Brucei Length = 300 Back     alignment and structure
>pdb|3PZS|A Chain A, Crystal Structure Of A Pyridoxamine Kinase From Yersinia Pestis Co92 Length = 289 Back     alignment and structure
>pdb|1TD2|A Chain A, Crystal Structure Of The Pdxy Protein From Escherichia Coli Length = 287 Back     alignment and structure
>pdb|3MBJ|A Chain A, Crystal Structure Of A Putative Phosphomethylpyrimidine Kinase (Bt_4458) From Bacteroides Thetaiotaomicron Vpi-5482 At 2.10 A Resolution (Rhombohedral Form) Length = 291 Back     alignment and structure
>pdb|1VI9|A Chain A, Crystal Structure Of Pyridoxamine Kinase Length = 299 Back     alignment and structure
>pdb|2DDM|A Chain A, Crystal Structure Of Pyridoxal Kinase From The Escherichia Coli Pdxk Gene At 2.1 A Resolution Length = 283 Back     alignment and structure
>pdb|3RY7|A Chain A, Crystal Sructure Of Sa239 Length = 304 Back     alignment and structure
>pdb|1RK2|A Chain A, E. Coli Ribokinase Complexed With Ribose And Adp, Solved In Space Group P212121 Length = 309 Back     alignment and structure
>pdb|3H74|A Chain A, Crystal Structure Of Pyridoxal Kinase From Lactobacillus Plantarum Length = 282 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query360
2ddm_A283 Pyridoxine kinase; pyridoxal kinase, ribokinase, p 3e-81
2ddm_A283 Pyridoxine kinase; pyridoxal kinase, ribokinase, p 1e-09
2yxt_A312 Pyridoxal kinase; beta sheet with alpha helix, met 3e-79
2yxt_A312 Pyridoxal kinase; beta sheet with alpha helix, met 2e-09
3pzs_A289 PM kinase, pyridoxamine kinase; structural genomic 2e-75
3pzs_A289 PM kinase, pyridoxamine kinase; structural genomic 8e-07
3mbh_A291 Putative phosphomethylpyrimidine kinase; structura 5e-75
3mbh_A291 Putative phosphomethylpyrimidine kinase; structura 5e-10
3zs7_A300 Pyridoxal kinase; transferase, sleeping sickness; 2e-74
3zs7_A300 Pyridoxal kinase; transferase, sleeping sickness; 3e-07
3h74_A282 Pyridoxal kinase; PSI-II, structural genomics, pro 8e-21
2fv7_A331 Ribokinase; structural genomics, structural genomi 3e-12
3kzh_A328 Probable sugar kinase; NYSGXRC, PSI-II, protein st 6e-12
3ry7_A304 Ribokinase; transferase; 2.15A {Staphylococcus aur 3e-11
1rkd_A309 Ribokinase; carbohydrate kinase, ribose, nucleotid 8e-11
1vm7_A311 Ribokinase; TM0960, structural genomics, JCSG, pro 2e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1ub0_A258 THID, phosphomethylpyrimidine kinase; thiamin bios 2e-08
2nwh_A317 AGR_C_3442P, carbohydrate kinase; structural genom 9e-08
3h49_A325 Ribokinase; transferase,PFKB family,sugar kinase Y 1e-07
2c4e_A302 Sugar kinase MJ0406; transferase, nucleoside kinas 3e-07
1tyy_A339 Putative sugar kinase; ribokinase fold, alpha/beta 3e-07
2i5b_A271 Phosphomethylpyrimidine kinase; ADP complex, PDXK, 4e-07
1vk4_A298 PFKB carbohydrate kinase TM0415; structural genomi 1e-06
3kd6_A313 Carbohydrate kinase, PFKB family; nucleoside kinas 2e-06
3rm5_A 550 Hydroxymethylpyrimidine/phosphomethylpyrimidine K 1e-05
1jxh_A288 Phosphomethylpyrimidine kinase; THID, ribokinase f 1e-05
3ktn_A346 Carbohydrate kinase, PFKB family; PFKB family,ribo 2e-05
2rbc_A343 Sugar kinase, AGR_C_4560P; ribokinase family, ATP- 2e-05
2pkf_A334 Adenosine kinase; transferase, S genomics, TB stru 9e-05
2afb_A351 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- 9e-05
3iq0_A330 Putative ribokinase II; transferase,kinase,SAD,rib 9e-05
3b1n_A326 Ribokinase, putative; rossmann fold, ATP binding, 1e-04
1v1a_A309 2-keto-3-deoxygluconate kinase; ATP, structural ge 1e-04
2qcv_A332 Putative 5-dehydro-2-deoxygluconokinase; structura 3e-04
3hj6_A327 Fructokinase, FRK; fructose, transferase, carbohyd 5e-04
3ljs_A338 Fructokinase; fructokianse, PSI2, NYSGXRC, structu 6e-04
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A* Length = 283 Back     alignment and structure
 Score =  248 bits (635), Expect = 3e-81
 Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 6/232 (2%)

Query: 114 LGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLKMND-LMDYTHVLTGYCRSPQ 172
            G  V A+ TV  SN   Y    G  I ++ F   +  L+  D L     V TGY  +  
Sbjct: 42  NGLNVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTAS 101

Query: 173 LLSKIGELVKELKKANPTLMYVCDPVMGD-NGRMYVPEEVLPIYANELLSVADVICPNQF 231
            +  + E +  L+K +P L+ + DPV+GD +  +YV  ++   Y   LL +A  I PN F
Sbjct: 102 QIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIF 161

Query: 232 EAELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVS 291
           E E+LT    +D  S +     L    +K VV++S+    E         VV  + +   
Sbjct: 162 ELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVVTSASGNEEN---QEMQVVVVTADSVNV 218

Query: 292 INIPQFDASFTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLERTAQ 343
           I+  +      GTGDLF A +++ + +    + +++ R    +  V+  T Q
Sbjct: 219 ISHSRVKTDLKGTGDLFCAQLISGLLK-GKALTDAVHRAGLRVLEVMRYTQQ 269
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A* Length = 283 Back     alignment and structure
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A* Length = 312 Back     alignment and structure
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A* Length = 312 Back     alignment and structure
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} PDB: 1td2_A* 1vi9_A* Length = 289 Back     alignment and structure
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} PDB: 1td2_A* 1vi9_A* Length = 289 Back     alignment and structure
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A* Length = 291 Back     alignment and structure
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A* Length = 291 Back     alignment and structure
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei} Length = 300 Back     alignment and structure
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei} Length = 300 Back     alignment and structure
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A* Length = 282 Back     alignment and structure
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Length = 331 Back     alignment and structure
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Length = 328 Back     alignment and structure
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Length = 304 Back     alignment and structure
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Length = 309 Back     alignment and structure
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 Length = 311 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2 Length = 258 Back     alignment and structure
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Length = 317 Back     alignment and structure
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Length = 325 Back     alignment and structure
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Length = 302 Back     alignment and structure
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Length = 339 Back     alignment and structure
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis} Length = 271 Back     alignment and structure
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Length = 298 Back     alignment and structure
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Length = 313 Back     alignment and structure
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae} Length = 550 Back     alignment and structure
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A* Length = 288 Back     alignment and structure
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Length = 346 Back     alignment and structure
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Length = 343 Back     alignment and structure
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Length = 334 Back     alignment and structure
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Length = 351 Back     alignment and structure
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} PDB: 3k9e_A Length = 330 Back     alignment and structure
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Length = 326 Back     alignment and structure
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Length = 309 Back     alignment and structure
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Length = 332 Back     alignment and structure
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Length = 327 Back     alignment and structure
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} PDB: 3lki_A* Length = 338 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query360
3zs7_A300 Pyridoxal kinase; transferase, sleeping sickness; 100.0
3pzs_A289 PM kinase, pyridoxamine kinase; structural genomic 100.0
3mbh_A291 Putative phosphomethylpyrimidine kinase; structura 100.0
3h74_A282 Pyridoxal kinase; PSI-II, structural genomics, pro 100.0
3rm5_A 550 Hydroxymethylpyrimidine/phosphomethylpyrimidine K 100.0
2ddm_A283 Pyridoxine kinase; pyridoxal kinase, ribokinase, p 99.97
2yxt_A312 Pyridoxal kinase; beta sheet with alpha helix, met 99.97
2i5b_A271 Phosphomethylpyrimidine kinase; ADP complex, PDXK, 99.96
1ub0_A258 THID, phosphomethylpyrimidine kinase; thiamin bios 99.96
1jxh_A288 Phosphomethylpyrimidine kinase; THID, ribokinase f 99.95
4du5_A336 PFKB; structural genomics, PSI-biology, NEW YORK s 99.86
2abq_A306 Fructose 1-phosphate kinase; dimer, structural gen 99.86
1rkd_A309 Ribokinase; carbohydrate kinase, ribose, nucleotid 99.86
3lhx_A319 Ketodeoxygluconokinase; structural genomics, PSI-2 99.86
2fv7_A331 Ribokinase; structural genomics, structural genomi 99.86
3umo_A309 6-phosphofructokinase isozyme 2; glycolysis, trans 99.86
4e69_A328 2-dehydro-3-deoxygluconokinase; putative sugar kin 99.86
2jg1_A330 Tagatose-6-phosphate kinase; phosphoryl transfer, 99.85
3ktn_A346 Carbohydrate kinase, PFKB family; PFKB family,ribo 99.85
3kzh_A328 Probable sugar kinase; NYSGXRC, PSI-II, protein st 99.85
2jg5_A306 Fructose 1-phosphate kinase; 1-phosphofructokinase 99.84
3ljs_A338 Fructokinase; fructokianse, PSI2, NYSGXRC, structu 99.84
3ry7_A304 Ribokinase; transferase; 2.15A {Staphylococcus aur 99.84
3iq0_A330 Putative ribokinase II; transferase,kinase,SAD,rib 99.84
4e84_A352 D-beta-D-heptose 7-phosphate kinase; LPS-heptose b 99.84
3cqd_A309 6-phosphofructokinase isozyme 2; phosphofructokina 99.84
2f02_A323 Tagatose-6-phosphate kinase; LACC, structural geno 99.83
2qhp_A296 Fructokinase; NP_810670.1, PFKB family carbohydrat 99.83
3vas_A370 Putative adenosine kinase; ribokinase, enzyme, tra 99.82
2r3b_A310 YJEF-related protein; putative kinase in the ribok 99.82
3ie7_A320 LIN2199 protein; phosphofructokinases, transferase 99.82
3pl2_A319 Sugar kinase, ribokinase family; PFKB PFAM motif, 99.81
3bgk_A311 SMU.573, putative uncharacterized protein; alpha/b 99.81
3otx_A347 Adenosine kinase, putative; AP5A, transferase-tran 99.81
3loo_A365 Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad 99.81
2ajr_A331 Sugar kinase, PFKB family; TM0828, possible 1-phos 99.8
2afb_A351 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- 99.8
2qcv_A332 Putative 5-dehydro-2-deoxygluconokinase; structura 99.8
2nwh_A317 AGR_C_3442P, carbohydrate kinase; structural genom 99.79
2v78_A313 Fructokinase; transferase, PFKB family carbohydrat 99.78
1tyy_A339 Putative sugar kinase; ribokinase fold, alpha/beta 99.78
3h49_A325 Ribokinase; transferase,PFKB family,sugar kinase Y 99.78
4e3a_A352 Sugar kinase protein; structural genomics, protein 99.77
2abs_A383 Adenosine kinase, AK; ribokinase fold, alpha/beta, 99.77
3hj6_A327 Fructokinase, FRK; fructose, transferase, carbohyd 99.76
1vm7_A311 Ribokinase; TM0960, structural genomics, JCSG, pro 99.76
1v1a_A309 2-keto-3-deoxygluconate kinase; ATP, structural ge 99.76
1bx4_A345 Protein (adenosine kinase); human adenosine kinase 99.76
2dcn_A311 Hypothetical fructokinase; 2-keto-3-deoxygluconate 99.76
2rbc_A343 Sugar kinase, AGR_C_4560P; ribokinase family, ATP- 99.75
3rss_A502 Putative uncharacterized protein; unknown function 99.74
3rpz_A279 ADP/ATP-dependent NAD(P)H-hydrate dehydratase; str 99.74
3uq6_A372 Adenosine kinase, putative; ribokinase, transferas 99.74
3ikh_A299 Carbohydrate kinase; transferase,kinase,SAD,ribose 99.74
4gm6_A351 PFKB family carbohydrate kinase; enzyme function i 99.72
3kd6_A313 Carbohydrate kinase, PFKB family; nucleoside kinas 99.72
1vk4_A298 PFKB carbohydrate kinase TM0415; structural genomi 99.71
1ekq_A272 Hydroxyethylthiazole kinase; alpha-beta, transfera 99.71
2pkf_A334 Adenosine kinase; transferase, S genomics, TB stru 99.71
3ewm_A313 Uncharacterized sugar kinase PH1459; carbohydrate 99.7
2hlz_A312 Ketohexokinase; non-protein kinase, creatine kinas 99.69
2c4e_A302 Sugar kinase MJ0406; transferase, nucleoside kinas 99.67
3b1n_A326 Ribokinase, putative; rossmann fold, ATP binding, 99.66
3dzv_A273 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_ 99.65
1v8a_A265 Hydroxyethylthiazole kinase; alpha-beta, ATP bindi 99.64
3go6_A310 Ribokinase RBSK; phosphofructokinase, carbohydrate 99.61
3bf5_A306 Ribokinase related protein; 10640157, putative rib 99.53
3k5w_A475 Carbohydrate kinase; 11206B,helicobacter pylori,PS 99.53
3hpd_A265 Hydroxyethylthiazole kinase; alpha-beta, ATP bindi 99.45
3nl6_A540 Thiamine biosynthetic bifunctional enzyme; thiamin 99.42
3drw_A474 ADP-specific phosphofructokinase; AMP, GLYC kinase 95.49
3zs7_A300 Pyridoxal kinase; transferase, sleeping sickness; 94.79
3mbh_A291 Putative phosphomethylpyrimidine kinase; structura 85.37
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei} Back     alignment and structure
Probab=100.00  E-value=1.7e-39  Score=305.45  Aligned_cols=251  Identities=36%  Similarity=0.651  Sum_probs=205.7

Q ss_pred             ccceeeecccccc-----cccccCCchhhhhcCeeeeeeeeeeecCCCCCCccccccCCHHHHHHHHHHhhhCCC-CccC
Q psy11349         88 ERTIATIQSVLER-----TAQSFPNKGQYEVLGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLKMNDL-MDYT  161 (360)
Q Consensus        88 ~~~vl~I~~~~~~-----~~~~~~~~~~l~~~G~~~~~i~t~~~s~~~~~~~~~g~~l~~~~l~~ll~~~~~~~~-~~~d  161 (360)
                      +++||+|++++++     .+..++    |+.+|+++++++|+++|||++|..+.+..++.+|++.++++++...+ .++|
T Consensus         3 ~~~VLsI~~~~~~G~~G~~aa~~~----l~~~G~~v~~~~T~~~Snhtg~~~~~g~~~~~~ql~~~~~~~~~~~~~~~~d   78 (300)
T 3zs7_A            3 EKTVLSIQSFVTHGYVGNKAATFP----LQLHGFDVDGINTVCLSNHSGYPVIRGHRMSLQEYDELMEGVRANNFLSNYR   78 (300)
T ss_dssp             CCEEEEEEEEESSSSCHHHHHHHH----HHHTTCEEEEEEEEEESSCTTSSCCCEEECCHHHHHHHHHHHHHTTCGGGCS
T ss_pred             CCeEEEEeCccCCCcchHHHHHHH----HHHcCCeeEEeeeEEecCCCCCCCcCCCcCCHHHHHHHHHHHHhcCCcccCC
Confidence            4789999999998     334554    89999999999999999999999999999999999999999987654 5789


Q ss_pred             EEEEeeeCCHHHHHHHHHHHHHHHhcCCC----ceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhcc
Q psy11349        162 HVLTGYCRSPQLLSKIGELVKELKKANPT----LMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLT  237 (360)
Q Consensus       162 ~i~~G~l~~~~~~~~i~~~l~~~~~~~~~----~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~  237 (360)
                      +|++||+++.++.+.+.++++++++.+|+    +++|||||++++|..|..++..+.+++ +++++|+||||..|++.|+
T Consensus        79 aV~tG~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~-Ll~~adiitPN~~Ea~~L~  157 (300)
T 3zs7_A           79 YILTGYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRE-LVPLADIVTPNYFEASLLS  157 (300)
T ss_dssp             EEEECCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHH-HGGGCSEECCCHHHHHHHH
T ss_pred             EEEECCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHH-HhhhCCEecCCHHHHHHHh
Confidence            99999999999999999999998876554    789999999999889988999999975 9999999999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHHhcCCCEEEEeccccC-CCceEEEEEeeecc--CCceEEEEEecccCCcccCchHHHHHHHHH
Q psy11349        238 KIPIKDKASLLKTINVLHDRGIKTVVISSSELG-PEKHLLGVASTVVG--GSKTTVSINIPQFDASFTGTGDLFAALMLA  314 (360)
Q Consensus       238 g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g-~~g~~~~~~~~~~~--~~~~~~~~~~~~v~~~t~GaGD~f~a~~~a  314 (360)
                      |.++.+.+++.+++++|+++|++.|+||+++.| ....+.++...+.+  +.++.++++.++++..++||||+|+|+|++
T Consensus       158 g~~~~~~~~~~~aa~~L~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~GtGD~fsaal~a  237 (300)
T 3zs7_A          158 GVTVNDLSSAILAADWFHNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYHEGRYTGTGDVFAACLLA  237 (300)
T ss_dssp             SSCCCSHHHHHHHHHHHHHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECCSSCBTTHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccCCCCCcCHHHHHHHHHHH
Confidence            999888899999999999999999999988776 33344333221100  002567788888887789999999999999


Q ss_pred             HHHcCCCCHHHHHHHHHHHHHHHHHHHHhhC
Q psy11349        315 YITRTNHNVKESLERTIATIQSVLERTAQSF  345 (360)
Q Consensus       315 ~L~~~g~~l~~A~~~A~a~~~~~l~~t~~~~  345 (360)
                      +| + |+++++|+++|.++++.+|+++.+.+
T Consensus       238 ~l-~-g~~~~~Av~~A~~~v~~~i~~t~~~~  266 (300)
T 3zs7_A          238 FS-H-SHPMDVAIGKSMAVLQELIIATRKEG  266 (300)
T ss_dssp             HH-T-TSCHHHHHHHHHHHHHHHHHHTTC--
T ss_pred             HH-c-CCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99 8 99999999999999999999998754
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A* Back     alignment and structure
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A* Back     alignment and structure
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A* Back     alignment and structure
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae} Back     alignment and structure
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A* Back     alignment and structure
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A* Back     alignment and structure
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis} Back     alignment and structure
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2 Back     alignment and structure
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A* Back     alignment and structure
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Back     alignment and structure
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 Back     alignment and structure
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Back     alignment and structure
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} Back     alignment and structure
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Back     alignment and structure
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A* Back     alignment and structure
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Back     alignment and structure
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* Back     alignment and structure
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Back     alignment and structure
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Back     alignment and structure
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} Back     alignment and structure
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A* Back     alignment and structure
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Back     alignment and structure
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A Back     alignment and structure
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A* Back     alignment and structure
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* Back     alignment and structure
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* Back     alignment and structure
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A* Back     alignment and structure
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A Back     alignment and structure
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A Back     alignment and structure
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0 Back     alignment and structure
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans} Back     alignment and structure
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* Back     alignment and structure
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} Back     alignment and structure
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Back     alignment and structure
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Back     alignment and structure
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Back     alignment and structure
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Back     alignment and structure
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Back     alignment and structure
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* Back     alignment and structure
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* Back     alignment and structure
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Back     alignment and structure
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Back     alignment and structure
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* Back     alignment and structure
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Back     alignment and structure
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Back     alignment and structure
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A* Back     alignment and structure
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A Back     alignment and structure
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A* Back     alignment and structure
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* Back     alignment and structure
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601} Back     alignment and structure
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Back     alignment and structure
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A* Back     alignment and structure
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Back     alignment and structure
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Back     alignment and structure
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A Back     alignment and structure
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Back     alignment and structure
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Back     alignment and structure
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis} Back     alignment and structure
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A Back     alignment and structure
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* Back     alignment and structure
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} Back     alignment and structure
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori} Back     alignment and structure
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii} Back     alignment and structure
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A* Back     alignment and structure
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A Back     alignment and structure
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei} Back     alignment and structure
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 360
d1lhpa_309 c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) 2e-55
d1lhpa_309 c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) 1e-09
d1vi9a_288 c.72.1.5 (A:) Pyridoxamine kinase {Escherichia col 6e-45
d1vi9a_288 c.72.1.5 (A:) Pyridoxamine kinase {Escherichia col 2e-06
d1ub0a_258 c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyri 9e-11
d1jxha_266 c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyri 2e-06
d1rkda_306 c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 0.001
d2fv7a1308 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapien 0.003
d2ajra1319 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {T 0.003
d2afba1333 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase 0.004
>d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} Length = 309 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: PfkB-like kinase
domain: Pyridoxal kinase
species: Sheep (Ovis aries) [TaxId: 9940]

 Score =  181 bits (461), Expect = 2e-55
 Identities = 110/250 (44%), Positives = 163/250 (65%), Gaps = 12/250 (4%)

Query: 112 EVLGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLKMNDLMDYTHVLTGYCRSP 171
           +VLGFEVDA+N+VQFSNH+GY H KG+V+   +  EL +GLK+N +  Y +VLTGY R  
Sbjct: 26  QVLGFEVDAVNSVQFSNHTGYSHWKGQVLNSDELQELYDGLKLNHVNQYDYVLTGYTRDK 85

Query: 172 QLLSKIGELVKELKKANPTLMYVCDPVMGDN----GRMYVPEEVLPIYANELLSVADVIC 227
             L+ + ++V+ELK+ NP L+YVCDPVMGD     G MYVP+++LP+Y  +++ VAD+I 
Sbjct: 86  SFLAMVVDIVQELKQQNPRLVYVCDPVMGDQRNGEGAMYVPDDLLPVYREKVVPVADIIT 145

Query: 228 PNQFEAELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEK---HLLGVASTVVG 284
           PNQFEAELLT   I  +   L+ +++LH  G  TVVI+SS L   +   +L+ + S    
Sbjct: 146 PNQFEAELLTGRKIHSQEEALEVMDMLHSMGPDTVVITSSNLLSPRGSDYLMALGSQRTR 205

Query: 285 GSKTTV-----SINIPQFDASFTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLE 339
               +V      + + + DA F GTGDLFAA++LA+  +  +N+K + E+T++ +  VL+
Sbjct: 206 APDGSVVTQRIRMEMHKVDAVFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSAMHHVLQ 265

Query: 340 RTAQSFPNKG 349
           RT +    K 
Sbjct: 266 RTIKCAKAKS 275
>d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} Length = 309 Back     information, alignment and structure
>d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} Length = 288 Back     information, alignment and structure
>d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} Length = 288 Back     information, alignment and structure
>d1ub0a_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Thermus thermophilus [TaxId: 274]} Length = 258 Back     information, alignment and structure
>d1jxha_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]} Length = 266 Back     information, alignment and structure
>d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} Length = 306 Back     information, alignment and structure
>d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 308 Back     information, alignment and structure
>d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Length = 319 Back     information, alignment and structure
>d2afba1 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]} Length = 333 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query360
d1vi9a_288 Pyridoxamine kinase {Escherichia coli [TaxId: 562] 100.0
d1lhpa_309 Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940] 100.0
d1ub0a_258 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha 100.0
d1jxha_266 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha 100.0
d2abqa1306 Fructose 1-phosphate kinase FruB {Bacillus halodur 99.78
d2f02a1313 Tagatose-6-phosphate kinase LacC {Enterococcus fae 99.77
d2ax3a1278 Hypothetical protein TM0922, C-terminal domain {Th 99.76
d1kyha_275 Hypothetical protein YxkO {Bacillus subtilis [TaxI 99.75
d2ajra1319 Putative sugar kinase TM0828 {Thermotoga maritima 99.72
d2afba1333 2-keto-3-deoxygluconate kinase {Thermotoga maritim 99.62
d1ekqa_269 Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ba 99.61
d1bx4a_342 Adenosine kinase {Human (Homo sapiens) [TaxId: 960 99.57
d1rkda_306 Ribokinase {Escherichia coli [TaxId: 562]} 99.56
d1v8aa_264 Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ar 99.51
d1v19a_302 2-keto-3-deoxygluconate kinase {Thermus thermophil 99.5
d2fv7a1308 Ribokinase {Human (Homo sapiens) [TaxId: 9606]} 99.49
d2absa1350 Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} 99.44
d1vk4a_288 Hypothetical protein TM0415 {Thermotoga maritima [ 99.44
d1tyya_304 Aminoimidazole riboside kinase {Salmonella typhimu 99.39
d1vm7a_299 Ribokinase {Thermotoga maritima [TaxId: 2336]} 99.38
d2dcna1308 Hypothetical fructokinase ST2478 {Sulfolobus tokod 99.3
d1lhpa_309 Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940] 97.64
d1vi9a_288 Pyridoxamine kinase {Escherichia coli [TaxId: 562] 93.81
d1ub0a_258 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha 86.89
>d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: PfkB-like kinase
domain: Pyridoxamine kinase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.8e-39  Score=299.18  Aligned_cols=251  Identities=28%  Similarity=0.408  Sum_probs=214.9

Q ss_pred             cccceeeecccccc-----cccccCCchhhhhcCeeeeeeeeeeecCCCCCCccccccCCHHHHHHHHHHhhhCCC-Ccc
Q psy11349         87 LERTIATIQSVLER-----TAQSFPNKGQYEVLGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLKMNDL-MDY  160 (360)
Q Consensus        87 ~~~~vl~I~~~~~~-----~~~~~~~~~~l~~~G~~~~~i~t~~~s~~~~~~~~~g~~l~~~~l~~ll~~~~~~~~-~~~  160 (360)
                      ++++||+||+++.+     .+..+    .|+.+|+++.+++|+++++|++|..+.|..++.++++++++.+....+ .++
T Consensus         1 ~Mk~vLsIqs~v~~G~vG~~aa~~----~l~~~G~~v~~l~Tv~lS~htgy~~~~g~~~~~~~l~~~l~~l~~~~~~~~~   76 (288)
T d1vi9a_           1 LMKNILAIQSHVVYGHAGNSAAEF----PMRRLGANVWPLNTVQFSNHTQYGKWTGCVMPPSHLTEIVQGIAAIDKLHTC   76 (288)
T ss_dssp             CCCEEEEEECCBSSSCCTHHHHHH----HHHHTTCEEEEEESEEESSCGGGSCCCEEECCHHHHHHHHHHHHHTTCGGGC
T ss_pred             CCccEEEEeccCCCCcchHHHHHH----HHHHCCCeeEEeceEEecCCCCCCccceeecCchhHHHHHHHHHHcCCcccC
Confidence            46899999999988     23344    589999999999999999999999999999999999999999876654 468


Q ss_pred             CEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCC-CCCCcCcHHHHHHhhcccceEEeCCHHHHHhccCC
Q psy11349        161 THVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGR-MYVPEEVLPIYANELLSVADVICPNQFEAELLTKI  239 (360)
Q Consensus       161 d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~-~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~g~  239 (360)
                      |+|++||+++.++.+.+.++++++++.+|+.++|+|||+++++. .+..++..+.+++++++.+|+||||..|++.|+|.
T Consensus        77 daI~tG~l~s~~~v~~i~~~l~~~k~~~p~~~~v~DPVm~d~~~~~~~~~~~~~~~~~~Llp~adiitPN~~Ea~~L~g~  156 (288)
T d1vi9a_          77 DAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDIIAPNLVELEILCEH  156 (288)
T ss_dssp             CEEEECCCSCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCTTHHHHHHHTHHHHCSEECCCHHHHHHHHTS
T ss_pred             CEEEEeccCChHHHHHHHHHHHHHhhccCCccEEEcceeecCCCCcCCChHHHHHHHHHhcccCCEEecCHHHHHHhhcc
Confidence            99999999999999999999999998888899999999999855 55667888888888999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHhcCCCEEEEeccccCC--CceEEEEEeeeccCCceEEEEEecccCC--c-ccCchHHHHHHHHH
Q psy11349        240 PIKDKASLLKTINVLHDRGIKTVVISSSELGP--EKHLLGVASTVVGGSKTTVSINIPQFDA--S-FTGTGDLFAALMLA  314 (360)
Q Consensus       240 ~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~--~g~~~~~~~~~~~~~~~~~~~~~~~v~~--~-t~GaGD~f~a~~~a  314 (360)
                      ++.+.+++.+++++|+++|++.|++|+++.+.  .+.......+.    ++.+.+..|.++.  . ++||||+|+|+|++
T Consensus       157 ~i~~~~~~~~aa~~L~~~g~~~Vvvt~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~GtGD~fsa~l~a  232 (288)
T d1vi9a_         157 AVNNVEEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVTA----DEAWHISRPLVDFGMRQPVGVGDVTSGLLLV  232 (288)
T ss_dssp             CCCSHHHHHHHHHHHHHTSCSEEEECCCGGGSSSTTEEEEEEECS----SCEEEEEEECCCCTTCCCSCHHHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHhcCCCEEEEEecCccccccCceeEEEEeC----CceEEecccccccCCCCCCChhHHHHHHHHH
Confidence            99999999999999999999999999766543  22222222223    5666666666553  3 78999999999999


Q ss_pred             HHHcCCCCHHHHHHHHHHHHHHHHHHHHhhCC
Q psy11349        315 YITRTNHNVKESLERTIATIQSVLERTAQSFP  346 (360)
Q Consensus       315 ~L~~~g~~l~~A~~~A~a~~~~~l~~t~~~~~  346 (360)
                      +|++ |+++++|+++|.++++.+|++|.+.+.
T Consensus       233 ~l~~-G~~l~~A~~~A~~~v~~~l~~t~~~~~  263 (288)
T d1vi9a_         233 KLLQ-GATLQEALEHVTAAVYEIMVTTKAMQE  263 (288)
T ss_dssp             HHHT-TCCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHc-CCCHHHHHHHHHHHHHHHHHhhhhcCc
Confidence            9999 999999999999999999999987553
>d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1ub0a_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1jxha_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2ax3a1 c.72.1.4 (A:212-489) Hypothetical protein TM0922, C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1kyha_ c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ekqa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1v8aa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
>d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ub0a_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure