Psyllid ID: psy11416
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 171 | ||||||
| 389612145 | 287 | pescadillo homolog, partial [Papilio xut | 0.818 | 0.487 | 0.512 | 1e-35 | |
| 193664630 | 592 | PREDICTED: pescadillo homolog [Acyrthosi | 0.725 | 0.209 | 0.556 | 1e-35 | |
| 345483656 | 619 | PREDICTED: pescadillo homolog [Nasonia v | 0.742 | 0.205 | 0.531 | 2e-35 | |
| 383865544 | 600 | PREDICTED: pescadillo homolog [Megachile | 0.725 | 0.206 | 0.549 | 3e-35 | |
| 307182424 | 638 | Pescadillo [Camponotus floridanus] | 0.725 | 0.194 | 0.542 | 3e-35 | |
| 332028265 | 603 | Pescadillo-like protein [Acromyrmex echi | 0.742 | 0.210 | 0.531 | 3e-34 | |
| 307211715 | 607 | Pescadillo [Harpegnathos saltator] | 0.742 | 0.209 | 0.531 | 7e-34 | |
| 322796604 | 605 | hypothetical protein SINV_15032 [Solenop | 0.742 | 0.209 | 0.510 | 6e-33 | |
| 350411819 | 590 | PREDICTED: pescadillo homolog [Bombus im | 0.783 | 0.227 | 0.493 | 7e-33 | |
| 270016932 | 317 | hypothetical protein TcasGA2_TC002330 [T | 0.742 | 0.400 | 0.503 | 8e-33 |
| >gi|389612145|dbj|BAM19592.1| pescadillo homolog, partial [Papilio xuthus] | Back alignment and taxonomy information |
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Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 102/158 (64%), Gaps = 18/158 (11%)
Query: 14 FSDALRDLDDALTLCILIGRMPGLKKQRLGQDKGLMELCQRLPVEFMHAVIHARALRKAF 73
F DALRDLDD LTLC L P LKK + +D+ L LC+RL VEFMHAVI A+ALRK F
Sbjct: 127 FVDALRDLDDCLTLCFLFSTFPSLKK--VPRDQSL--LCRRLSVEFMHAVIAAKALRKVF 182
Query: 74 ISIKGFYFQAEFKGQKITWIIPHLYGHQAHSNMLIMCFLFPQPYDKKQIDIRTMLTFAEF 133
ISIKG+Y+QAEF+GQ ITWI+PH + QP K ++D + M TF EF
Sbjct: 183 ISIKGYYYQAEFEGQTITWIVPHHFSF--------------QPQSKDEVDFKIMSTFVEF 228
Query: 134 YTSLLGFTLYRLYHTLNLAYPPCFSPQFRHQKWKIHID 171
YT +LGF ++L+H+LNL YPP + F + K +D
Sbjct: 229 YTMMLGFINFKLFHSLNLVYPPQLTAGFTPETDKDLVD 266
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Source: Papilio xuthus Species: Papilio xuthus Genus: Papilio Family: Papilionidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|193664630|ref|XP_001945072.1| PREDICTED: pescadillo homolog [Acyrthosiphon pisum] | Back alignment and taxonomy information |
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| >gi|345483656|ref|XP_001600892.2| PREDICTED: pescadillo homolog [Nasonia vitripennis] | Back alignment and taxonomy information |
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| >gi|383865544|ref|XP_003708233.1| PREDICTED: pescadillo homolog [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|307182424|gb|EFN69660.1| Pescadillo [Camponotus floridanus] | Back alignment and taxonomy information |
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| >gi|332028265|gb|EGI68312.1| Pescadillo-like protein [Acromyrmex echinatior] | Back alignment and taxonomy information |
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| >gi|307211715|gb|EFN87716.1| Pescadillo [Harpegnathos saltator] | Back alignment and taxonomy information |
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| >gi|322796604|gb|EFZ19078.1| hypothetical protein SINV_15032 [Solenopsis invicta] | Back alignment and taxonomy information |
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| >gi|350411819|ref|XP_003489463.1| PREDICTED: pescadillo homolog [Bombus impatiens] | Back alignment and taxonomy information |
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| >gi|270016932|gb|EFA13378.1| hypothetical protein TcasGA2_TC002330 [Tribolium castaneum] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 171 | ||||||
| UNIPROTKB|B4KID9 | 631 | GI18209 "Pescadillo homolog" [ | 0.543 | 0.147 | 0.542 | 2.6e-27 | |
| UNIPROTKB|B3MUX9 | 627 | GF21889 "Pescadillo homolog" [ | 0.543 | 0.148 | 0.532 | 1.4e-26 | |
| UNIPROTKB|B4LQD0 | 633 | GJ14807 "Pescadillo homolog" [ | 0.543 | 0.146 | 0.532 | 1.5e-26 | |
| FB|FBgn0032138 | 627 | CG4364 [Drosophila melanogaste | 0.543 | 0.148 | 0.523 | 1.9e-26 | |
| UNIPROTKB|B4HW93 | 627 | GM12330 "Pescadillo homolog" [ | 0.543 | 0.148 | 0.523 | 1.9e-26 | |
| UNIPROTKB|B4Q865 | 627 | GD22342 "Pescadillo homolog" [ | 0.543 | 0.148 | 0.523 | 1.9e-26 | |
| UNIPROTKB|B4NY70 | 628 | GE10391 "Pescadillo homolog" [ | 0.543 | 0.148 | 0.523 | 1.9e-26 | |
| UNIPROTKB|B3N8H0 | 629 | GG24014 "Pescadillo homolog" [ | 0.543 | 0.147 | 0.523 | 1.9e-26 | |
| UNIPROTKB|B4JZG8 | 635 | GH25074 "Pescadillo homolog" [ | 0.543 | 0.146 | 0.532 | 2e-26 | |
| UNIPROTKB|B4G7Y6 | 631 | GL19215 "Pescadillo homolog" [ | 0.543 | 0.147 | 0.523 | 8.8e-26 |
| UNIPROTKB|B4KID9 GI18209 "Pescadillo homolog" [Drosophila mojavensis (taxid:7230)] | Back alignment and assigned GO terms |
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Score = 300 (110.7 bits), Expect = 2.6e-27, Sum P(2) = 2.6e-27
Identities = 58/107 (54%), Positives = 74/107 (69%)
Query: 51 LCQRLPVEFMHAVIHARALRKAFISIKGFYFQAEFKGQKITWIIPHLYGHQAHSNMLIMC 110
LC+RL +EF+H VI +++LRK FISIKG+YFQAE KGQK+TWI+PH Y +
Sbjct: 158 LCRRLTIEFLHYVIASKSLRKVFISIKGYYFQAEIKGQKVTWIVPHYYPFK--------- 208
Query: 111 FLFPQPYDKKQIDIRTMLTFAEFYTSLLGFTLYRLYHTLNLAYPPCF 157
P ++++D + M F EFYT +LGFT YRLYH LNLAYPP F
Sbjct: 209 -----PQSRQEVDFKVMSIFVEFYTIMLGFTNYRLYHGLNLAYPPQF 250
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| UNIPROTKB|B3MUX9 GF21889 "Pescadillo homolog" [Drosophila ananassae (taxid:7217)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B4LQD0 GJ14807 "Pescadillo homolog" [Drosophila virilis (taxid:7244)] | Back alignment and assigned GO terms |
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| FB|FBgn0032138 CG4364 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B4HW93 GM12330 "Pescadillo homolog" [Drosophila sechellia (taxid:7238)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B4Q865 GD22342 "Pescadillo homolog" [Drosophila simulans (taxid:7240)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B4NY70 GE10391 "Pescadillo homolog" [Drosophila yakuba (taxid:7245)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B3N8H0 GG24014 "Pescadillo homolog" [Drosophila erecta (taxid:7220)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B4JZG8 GH25074 "Pescadillo homolog" [Drosophila grimshawi (taxid:7222)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B4G7Y6 GL19215 "Pescadillo homolog" [Drosophila persimilis (taxid:7234)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 171 | |||
| pfam06732 | 282 | pfam06732, Pescadillo_N, Pescadillo N-terminus | 1e-50 | |
| COG5163 | 591 | COG5163, NOP7, Protein required for biogenesis of | 5e-28 |
| >gnl|CDD|115393 pfam06732, Pescadillo_N, Pescadillo N-terminus | Back alignment and domain information |
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Score = 163 bits (415), Expect = 1e-50
Identities = 71/142 (50%), Positives = 88/142 (61%), Gaps = 20/142 (14%)
Query: 14 FSDALRDLDDALTLCILIGRMPGLKKQRLGQDKGLMELCQRLPVEFMHAVIHARALRKAF 73
F DALRDLDDAL++ L +P K + G + LC+RL EFMH VI +R+LRK F
Sbjct: 122 FIDALRDLDDALSMLFLFSTLPSTHKLK----VGTINLCRRLTAEFMHYVIRSRSLRKVF 177
Query: 74 ISIKGFYFQAEFKGQKITWIIPHLYGHQAHSNMLIMCFLFPQPYDKKQIDIRTMLTFAEF 133
ISIKG Y+QAE KG+K+TWI+PH + H P +D R MLTF EF
Sbjct: 178 ISIKGIYYQAEIKGEKVTWIVPHEFAHN-----------HPT-----DVDFRVMLTFLEF 221
Query: 134 YTSLLGFTLYRLYHTLNLAYPP 155
YT+LLGF ++LY LNL YPP
Sbjct: 222 YTTLLGFVNFKLYQDLNLDYPP 243
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This family represents the N-terminal region of Pescadillo. Pescadillo protein localises to distinct substructures of the interphase nucleus including nucleoli, the site of ribosome biogenesis. During mitosis pescadillo closely associates with the periphery of metaphase chromosomes and by late anaphase is associated with nucleolus-derived foci and prenucleolar bodies. Blastomeres in mouse embryos lacking pescadillo arrest at morula stages of development, the nucleoli fail to differentiate and accumulation of ribosomes is inhibited. It has been proposed that in mammalian cells pescadillo is essential for ribosome biogenesis and nucleologenesis and that disruption to its function results in cell cycle arrest. This family is often found in conjunction with a pfam00533 domain. Length = 282 |
| >gnl|CDD|227492 COG5163, NOP7, Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 171 | |||
| PF06732 | 281 | Pescadillo_N: Pescadillo N-terminus; InterPro: IPR | 100.0 | |
| KOG2481|consensus | 570 | 100.0 | ||
| COG5163 | 591 | NOP7 Protein required for biogenesis of the 60S ri | 100.0 |
| >PF06732 Pescadillo_N: Pescadillo N-terminus; InterPro: IPR010613 Pescadillo protein localises to distinct substructures of the interphase nucleus including nucleoli, the site of ribosome biogenesis | Back alignment and domain information |
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Probab=100.00 E-value=1.8e-67 Score=454.63 Aligned_cols=139 Identities=50% Similarity=0.859 Sum_probs=134.9
Q ss_pred CCCCCChHHHHhCcchhhhHHHHHhcCCCCCCcCCCCchhhhHHHhhhHHHHHHHHHHhcccceeeeeeeeeEEEEEEcC
Q psy11416 8 SVVLNRFSDALRDLDDALTLCILIGRMPGLKKQRLGQDKGLMELCQRLPVEFMHAVIHARALRKAFISIKGFYFQAEFKG 87 (171)
Q Consensus 8 ~~RYPtF~DALrDLDDaLtli~Lfa~lP~~~~i~~g~~~~~i~~c~rL~~EF~~yVi~~r~LrKvFiSIKGiYyQAei~G 87 (171)
-+|||||+|||||||||||||+|||+||+++++++ +++++|+||++||++||+++++|||||||||||||||||+|
T Consensus 116 KERYPtF~dALrDLDDaLs~i~Lfa~lp~~~~i~~----~~i~~c~rL~~ef~~yv~~~~~LrKvFiSiKGiYyQAeI~G 191 (281)
T PF06732_consen 116 KERYPTFIDALRDLDDALSMIFLFATLPADKKIPS----ELIAKCRRLCNEFQHYVIRTRSLRKVFISIKGIYYQAEILG 191 (281)
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHHHhCCCcCCCCh----HHHHHHHHHHHHHHHHHHHhhhhhhheeeeeeEEEEEEECC
Confidence 38999999999999999999999999999999888 99999999999999999999999999999999999999999
Q ss_pred eeEEEecccccccccchhhhHhhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCccccccc
Q psy11416 88 QKITWIIPHLYGHQAHSNMLIMCFLFPQPYDKKQIDIRTMLTFAEFYTSLLGFTLYRLYHTLNLAYPPCFSPQFRHQKW 166 (171)
Q Consensus 88 q~ItWivPh~f~~~~~~~~~~~~~~~~~py~p~dVDfrvM~TF~EFY~tLLgFVnfkLY~~lnL~YPP~~~~~~~~~k~ 166 (171)
|+|||++||+|+|.. |.||||+||+||+|||+|||||||||||+++||.|||+++...+++..
T Consensus 192 ~~ItWl~Ph~f~~~~----------------p~dVD~~vm~tFlEFY~tLl~FVnfkLy~~~~l~YPP~~~~~~~~~~~ 254 (281)
T PF06732_consen 192 QKITWLVPHQFSQDI----------------PTDVDFRVMLTFLEFYTTLLGFVNFKLYHSLNLVYPPKLDSSLDKEAA 254 (281)
T ss_pred ceEEEEeccccCCCC----------------CCcccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccchhc
Confidence 999999999999998 999999999999999999999999999999999999999998887653
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During mitosis pescadillo closely associates with the periphery of metaphase chromosomes and by late anaphase is associated with nucleolus-derived foci and prenucleolar bodies. Blastomeres in mouse embryos lacking pescadillo arrest at morula stages of development, the nucleoli fail to differentiate and accumulation of ribosomes is inhibited. It has been proposed that in mammalian cells pescadillo is essential for ribosome biogenesis and nucleologenesis and that disruption to its function results in cell cycle arrest []. ; GO: 0042254 ribosome biogenesis, 0005730 nucleolus |
| >KOG2481|consensus | Back alignment and domain information |
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| >COG5163 NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00