Psyllid ID: psy11416


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-
MIGRFRNSVVLNRFSDALRDLDDALTLCILIGRMPGLKKQRLGQDKGLMELCQRLPVEFMHAVIHARALRKAFISIKGFYFQAEFKGQKITWIIPHLYGHQAHSNMLIMCFLFPQPYDKKQIDIRTMLTFAEFYTSLLGFTLYRLYHTLNLAYPPCFSPQFRHQKWKIHID
cccccccHHHHHHHHHHHHcccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccEEEEEEEccEEEEEEccccccccccccHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHcccc
cccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEcccHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEcccEEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccEEEEEEcccccccccccHHccHHHHccccc
migrfrnsVVLNRFSDALRDLDDALTLCILIgrmpglkkqrlgqdKGLMELCQRLPVEFMHAVIHARALRKAFISIKGFyfqaefkgqkitwiiphlyghqahSNMLIMCflfpqpydkkqiDIRTMLTFAEFYTSLLGFTLYRLYHTlnlayppcfspqfrhqkwkihid
migrfrnsVVLNRFSDALRDLDDALTLCILigrmpglkkqRLGQDKGLMELCQRLPVEFMHAVIHARALRKAFISIKGFYFQAEFKGQKITWIIPHLYGHQAHSNMLIMCFLFPQPYDKKQIDIRTMLTFAEFYTSLLGFTLYRLYHTLNLAYPPCFSPQFRHQKWKIHID
MIGRFRNSVVLNRFSdalrdlddaltlCILIGRMPGLKKQRLGQDKGLMELCQRLPVEFMHAVIHARALRKAFISIKGFYFQAEFKGQKITWIIPHLYGHQAHSNMLIMCFLFPQPYDKKQIDIRTMLTFAEFYTSLLGFTLYRLYHTLNLAYPPCFSPQFRHQKWKIHID
*****RNSVVLNRFSDALRDLDDALTLCILIGRMPGLKKQRLGQDKGLMELCQRLPVEFMHAVIHARALRKAFISIKGFYFQAEFKGQKITWIIPHLYGHQAHSNMLIMCFLFPQPYDKKQIDIRTMLTFAEFYTSLLGFTLYRLYHTLNLAYPPCFSPQFRHQKWKI***
***RFRNSVVLNRFSDALRDLDDALTLCILIGRMPGL***********MELCQRLPVEFMHAVIHARALRKAFISIKGFYFQAEFKGQKITWIIPHLYGHQAHSNMLIMCFLFPQPYDKKQIDIRTMLTFAEFYTSLLGFTLYRLYHTLNLAYPPC***************
MIGRFRNSVVLNRFSDALRDLDDALTLCILIGRMPGLKKQRLGQDKGLMELCQRLPVEFMHAVIHARALRKAFISIKGFYFQAEFKGQKITWIIPHLYGHQAHSNMLIMCFLFPQPYDKKQIDIRTMLTFAEFYTSLLGFTLYRLYHTLNLAYPPCFSPQFRHQKWKIHID
*IGRFRNSVVLNRFSDALRDLDDALTLCILIGRMPGLKKQRLGQDKGLMELCQRLPVEFMHAVIHARALRKAFISIKGFYFQAEFKGQKITWIIPHLYGHQAHSNMLIMCFLFPQPYDKKQIDIRTMLTFAEFYTSLLGFTLYRLYHTLNLAYPPCFSPQFRH********
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MIGRFRNSVVLNRFSDALRDLDDALTLCILIGRMPGLKKQRLGQDKGLMELCQRLPVEFMHAVIHARALRKAFISIKGFYFQAEFKGQKITWIIPHLYGHQAHSNMLIMCFLFPQPYDKKQIDIRTMLTFAEFYTSLLGFTLYRLYHTLNLAYPPCFSPQFRHQKWKIHID
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query171 2.2.26 [Sep-21-2011]
B4KID9 631 Pescadillo homolog OS=Dro N/A N/A 0.736 0.199 0.506 5e-34
B4LQD0 633 Pescadillo homolog OS=Dro N/A N/A 0.736 0.199 0.5 1e-32
B3MUX9 627 Pescadillo homolog OS=Dro N/A N/A 0.736 0.200 0.5 3e-32
B4HW93 627 Pescadillo homolog OS=Dro N/A N/A 0.736 0.200 0.493 3e-32
B4Q865 627 Pescadillo homolog OS=Dro N/A N/A 0.736 0.200 0.493 3e-32
B3N8H0 629 Pescadillo homolog OS=Dro N/A N/A 0.736 0.200 0.493 3e-32
Q9VL96 627 Pescadillo homolog OS=Dro yes N/A 0.736 0.200 0.493 3e-32
B4NY70 628 Pescadillo homolog OS=Dro N/A N/A 0.736 0.200 0.493 4e-32
B4JZG8 635 Pescadillo homolog OS=Dro N/A N/A 0.736 0.198 0.5 4e-32
Q3B8N8 586 Pescadillo homolog OS=Rat yes N/A 0.742 0.216 0.496 4e-32
>sp|B4KID9|PESC_DROMO Pescadillo homolog OS=Drosophila mojavensis GN=GI18209 PE=3 SV=1 Back     alignment and function desciption
 Score =  143 bits (360), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 73/144 (50%), Positives = 90/144 (62%), Gaps = 18/144 (12%)

Query: 14  FSDALRDLDDALTLCILIGRMPGLKKQRLGQDKGLMELCQRLPVEFMHAVIHARALRKAF 73
           F DAL+DLDD LTL  L    P L      Q      LC+RL +EF+H VI +++LRK F
Sbjct: 125 FIDALKDLDDCLTLLFLFSTFPSLHLIPREQSN----LCRRLTIEFLHYVIASKSLRKVF 180

Query: 74  ISIKGFYFQAEFKGQKITWIIPHLYGHQAHSNMLIMCFLFPQPYDKKQIDIRTMLTFAEF 133
           ISIKG+YFQAE KGQK+TWI+PH Y                +P  ++++D + M  F EF
Sbjct: 181 ISIKGYYFQAEIKGQKVTWIVPHYYPF--------------KPQSRQEVDFKVMSIFVEF 226

Query: 134 YTSLLGFTLYRLYHTLNLAYPPCF 157
           YT +LGFT YRLYH LNLAYPP F
Sbjct: 227 YTIMLGFTNYRLYHGLNLAYPPQF 250




Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.
Drosophila mojavensis (taxid: 7230)
>sp|B4LQD0|PESC_DROVI Pescadillo homolog OS=Drosophila virilis GN=GJ14807 PE=3 SV=1 Back     alignment and function description
>sp|B3MUX9|PESC_DROAN Pescadillo homolog OS=Drosophila ananassae GN=GF21889 PE=3 SV=1 Back     alignment and function description
>sp|B4HW93|PESC_DROSE Pescadillo homolog OS=Drosophila sechellia GN=GM12330 PE=3 SV=1 Back     alignment and function description
>sp|B4Q865|PESC_DROSI Pescadillo homolog OS=Drosophila simulans GN=GD22342 PE=3 SV=1 Back     alignment and function description
>sp|B3N8H0|PESC_DROER Pescadillo homolog OS=Drosophila erecta GN=GG24014 PE=3 SV=1 Back     alignment and function description
>sp|Q9VL96|PESC_DROME Pescadillo homolog OS=Drosophila melanogaster GN=CG4364 PE=1 SV=1 Back     alignment and function description
>sp|B4NY70|PESC_DROYA Pescadillo homolog OS=Drosophila yakuba GN=GE10391 PE=3 SV=1 Back     alignment and function description
>sp|B4JZG8|PESC_DROGR Pescadillo homolog OS=Drosophila grimshawi GN=GH25074 PE=3 SV=1 Back     alignment and function description
>sp|Q3B8N8|PESC_RAT Pescadillo homolog OS=Rattus norvegicus GN=Pes1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query171
389612145 287 pescadillo homolog, partial [Papilio xut 0.818 0.487 0.512 1e-35
193664630 592 PREDICTED: pescadillo homolog [Acyrthosi 0.725 0.209 0.556 1e-35
345483656 619 PREDICTED: pescadillo homolog [Nasonia v 0.742 0.205 0.531 2e-35
383865544 600 PREDICTED: pescadillo homolog [Megachile 0.725 0.206 0.549 3e-35
307182424 638 Pescadillo [Camponotus floridanus] 0.725 0.194 0.542 3e-35
332028265 603 Pescadillo-like protein [Acromyrmex echi 0.742 0.210 0.531 3e-34
307211715 607 Pescadillo [Harpegnathos saltator] 0.742 0.209 0.531 7e-34
322796604 605 hypothetical protein SINV_15032 [Solenop 0.742 0.209 0.510 6e-33
350411819 590 PREDICTED: pescadillo homolog [Bombus im 0.783 0.227 0.493 7e-33
270016932 317 hypothetical protein TcasGA2_TC002330 [T 0.742 0.400 0.503 8e-33
>gi|389612145|dbj|BAM19592.1| pescadillo homolog, partial [Papilio xuthus] Back     alignment and taxonomy information
 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/158 (51%), Positives = 102/158 (64%), Gaps = 18/158 (11%)

Query: 14  FSDALRDLDDALTLCILIGRMPGLKKQRLGQDKGLMELCQRLPVEFMHAVIHARALRKAF 73
           F DALRDLDD LTLC L    P LKK  + +D+ L  LC+RL VEFMHAVI A+ALRK F
Sbjct: 127 FVDALRDLDDCLTLCFLFSTFPSLKK--VPRDQSL--LCRRLSVEFMHAVIAAKALRKVF 182

Query: 74  ISIKGFYFQAEFKGQKITWIIPHLYGHQAHSNMLIMCFLFPQPYDKKQIDIRTMLTFAEF 133
           ISIKG+Y+QAEF+GQ ITWI+PH +                QP  K ++D + M TF EF
Sbjct: 183 ISIKGYYYQAEFEGQTITWIVPHHFSF--------------QPQSKDEVDFKIMSTFVEF 228

Query: 134 YTSLLGFTLYRLYHTLNLAYPPCFSPQFRHQKWKIHID 171
           YT +LGF  ++L+H+LNL YPP  +  F  +  K  +D
Sbjct: 229 YTMMLGFINFKLFHSLNLVYPPQLTAGFTPETDKDLVD 266




Source: Papilio xuthus

Species: Papilio xuthus

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193664630|ref|XP_001945072.1| PREDICTED: pescadillo homolog [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|345483656|ref|XP_001600892.2| PREDICTED: pescadillo homolog [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|383865544|ref|XP_003708233.1| PREDICTED: pescadillo homolog [Megachile rotundata] Back     alignment and taxonomy information
>gi|307182424|gb|EFN69660.1| Pescadillo [Camponotus floridanus] Back     alignment and taxonomy information
>gi|332028265|gb|EGI68312.1| Pescadillo-like protein [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307211715|gb|EFN87716.1| Pescadillo [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|322796604|gb|EFZ19078.1| hypothetical protein SINV_15032 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|350411819|ref|XP_003489463.1| PREDICTED: pescadillo homolog [Bombus impatiens] Back     alignment and taxonomy information
>gi|270016932|gb|EFA13378.1| hypothetical protein TcasGA2_TC002330 [Tribolium castaneum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query171
UNIPROTKB|B4KID9 631 GI18209 "Pescadillo homolog" [ 0.543 0.147 0.542 2.6e-27
UNIPROTKB|B3MUX9 627 GF21889 "Pescadillo homolog" [ 0.543 0.148 0.532 1.4e-26
UNIPROTKB|B4LQD0 633 GJ14807 "Pescadillo homolog" [ 0.543 0.146 0.532 1.5e-26
FB|FBgn0032138 627 CG4364 [Drosophila melanogaste 0.543 0.148 0.523 1.9e-26
UNIPROTKB|B4HW93 627 GM12330 "Pescadillo homolog" [ 0.543 0.148 0.523 1.9e-26
UNIPROTKB|B4Q865 627 GD22342 "Pescadillo homolog" [ 0.543 0.148 0.523 1.9e-26
UNIPROTKB|B4NY70 628 GE10391 "Pescadillo homolog" [ 0.543 0.148 0.523 1.9e-26
UNIPROTKB|B3N8H0 629 GG24014 "Pescadillo homolog" [ 0.543 0.147 0.523 1.9e-26
UNIPROTKB|B4JZG8 635 GH25074 "Pescadillo homolog" [ 0.543 0.146 0.532 2e-26
UNIPROTKB|B4G7Y6 631 GL19215 "Pescadillo homolog" [ 0.543 0.147 0.523 8.8e-26
UNIPROTKB|B4KID9 GI18209 "Pescadillo homolog" [Drosophila mojavensis (taxid:7230)] Back     alignment and assigned GO terms
 Score = 300 (110.7 bits), Expect = 2.6e-27, Sum P(2) = 2.6e-27
 Identities = 58/107 (54%), Positives = 74/107 (69%)

Query:    51 LCQRLPVEFMHAVIHARALRKAFISIKGFYFQAEFKGQKITWIIPHLYGHQAHSNMLIMC 110
             LC+RL +EF+H VI +++LRK FISIKG+YFQAE KGQK+TWI+PH Y  +         
Sbjct:   158 LCRRLTIEFLHYVIASKSLRKVFISIKGYYFQAEIKGQKVTWIVPHYYPFK--------- 208

Query:   111 FLFPQPYDKKQIDIRTMLTFAEFYTSLLGFTLYRLYHTLNLAYPPCF 157
                  P  ++++D + M  F EFYT +LGFT YRLYH LNLAYPP F
Sbjct:   209 -----PQSRQEVDFKVMSIFVEFYTIMLGFTNYRLYHGLNLAYPPQF 250


GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS
GO:0005654 "nucleoplasm" evidence=ISS
GO:0005730 "nucleolus" evidence=ISS
UNIPROTKB|B3MUX9 GF21889 "Pescadillo homolog" [Drosophila ananassae (taxid:7217)] Back     alignment and assigned GO terms
UNIPROTKB|B4LQD0 GJ14807 "Pescadillo homolog" [Drosophila virilis (taxid:7244)] Back     alignment and assigned GO terms
FB|FBgn0032138 CG4364 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|B4HW93 GM12330 "Pescadillo homolog" [Drosophila sechellia (taxid:7238)] Back     alignment and assigned GO terms
UNIPROTKB|B4Q865 GD22342 "Pescadillo homolog" [Drosophila simulans (taxid:7240)] Back     alignment and assigned GO terms
UNIPROTKB|B4NY70 GE10391 "Pescadillo homolog" [Drosophila yakuba (taxid:7245)] Back     alignment and assigned GO terms
UNIPROTKB|B3N8H0 GG24014 "Pescadillo homolog" [Drosophila erecta (taxid:7220)] Back     alignment and assigned GO terms
UNIPROTKB|B4JZG8 GH25074 "Pescadillo homolog" [Drosophila grimshawi (taxid:7222)] Back     alignment and assigned GO terms
UNIPROTKB|B4G7Y6 GL19215 "Pescadillo homolog" [Drosophila persimilis (taxid:7234)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query171
pfam06732282 pfam06732, Pescadillo_N, Pescadillo N-terminus 1e-50
COG5163 591 COG5163, NOP7, Protein required for biogenesis of 5e-28
>gnl|CDD|115393 pfam06732, Pescadillo_N, Pescadillo N-terminus Back     alignment and domain information
 Score =  163 bits (415), Expect = 1e-50
 Identities = 71/142 (50%), Positives = 88/142 (61%), Gaps = 20/142 (14%)

Query: 14  FSDALRDLDDALTLCILIGRMPGLKKQRLGQDKGLMELCQRLPVEFMHAVIHARALRKAF 73
           F DALRDLDDAL++  L   +P   K +     G + LC+RL  EFMH VI +R+LRK F
Sbjct: 122 FIDALRDLDDALSMLFLFSTLPSTHKLK----VGTINLCRRLTAEFMHYVIRSRSLRKVF 177

Query: 74  ISIKGFYFQAEFKGQKITWIIPHLYGHQAHSNMLIMCFLFPQPYDKKQIDIRTMLTFAEF 133
           ISIKG Y+QAE KG+K+TWI+PH + H             P       +D R MLTF EF
Sbjct: 178 ISIKGIYYQAEIKGEKVTWIVPHEFAHN-----------HPT-----DVDFRVMLTFLEF 221

Query: 134 YTSLLGFTLYRLYHTLNLAYPP 155
           YT+LLGF  ++LY  LNL YPP
Sbjct: 222 YTTLLGFVNFKLYQDLNLDYPP 243


This family represents the N-terminal region of Pescadillo. Pescadillo protein localises to distinct substructures of the interphase nucleus including nucleoli, the site of ribosome biogenesis. During mitosis pescadillo closely associates with the periphery of metaphase chromosomes and by late anaphase is associated with nucleolus-derived foci and prenucleolar bodies. Blastomeres in mouse embryos lacking pescadillo arrest at morula stages of development, the nucleoli fail to differentiate and accumulation of ribosomes is inhibited. It has been proposed that in mammalian cells pescadillo is essential for ribosome biogenesis and nucleologenesis and that disruption to its function results in cell cycle arrest. This family is often found in conjunction with a pfam00533 domain. Length = 282

>gnl|CDD|227492 COG5163, NOP7, Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 171
PF06732281 Pescadillo_N: Pescadillo N-terminus; InterPro: IPR 100.0
KOG2481|consensus 570 100.0
COG5163 591 NOP7 Protein required for biogenesis of the 60S ri 100.0
>PF06732 Pescadillo_N: Pescadillo N-terminus; InterPro: IPR010613 Pescadillo protein localises to distinct substructures of the interphase nucleus including nucleoli, the site of ribosome biogenesis Back     alignment and domain information
Probab=100.00  E-value=1.8e-67  Score=454.63  Aligned_cols=139  Identities=50%  Similarity=0.859  Sum_probs=134.9

Q ss_pred             CCCCCChHHHHhCcchhhhHHHHHhcCCCCCCcCCCCchhhhHHHhhhHHHHHHHHHHhcccceeeeeeeeeEEEEEEcC
Q psy11416          8 SVVLNRFSDALRDLDDALTLCILIGRMPGLKKQRLGQDKGLMELCQRLPVEFMHAVIHARALRKAFISIKGFYFQAEFKG   87 (171)
Q Consensus         8 ~~RYPtF~DALrDLDDaLtli~Lfa~lP~~~~i~~g~~~~~i~~c~rL~~EF~~yVi~~r~LrKvFiSIKGiYyQAei~G   87 (171)
                      -+|||||+|||||||||||||+|||+||+++++++    +++++|+||++||++||+++++|||||||||||||||||+|
T Consensus       116 KERYPtF~dALrDLDDaLs~i~Lfa~lp~~~~i~~----~~i~~c~rL~~ef~~yv~~~~~LrKvFiSiKGiYyQAeI~G  191 (281)
T PF06732_consen  116 KERYPTFIDALRDLDDALSMIFLFATLPADKKIPS----ELIAKCRRLCNEFQHYVIRTRSLRKVFISIKGIYYQAEILG  191 (281)
T ss_pred             ccCCCcHHHHHHHHHHHHHHHHHHHhCCCcCCCCh----HHHHHHHHHHHHHHHHHHHhhhhhhheeeeeeEEEEEEECC
Confidence            38999999999999999999999999999999888    99999999999999999999999999999999999999999


Q ss_pred             eeEEEecccccccccchhhhHhhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCccccccc
Q psy11416         88 QKITWIIPHLYGHQAHSNMLIMCFLFPQPYDKKQIDIRTMLTFAEFYTSLLGFTLYRLYHTLNLAYPPCFSPQFRHQKW  166 (171)
Q Consensus        88 q~ItWivPh~f~~~~~~~~~~~~~~~~~py~p~dVDfrvM~TF~EFY~tLLgFVnfkLY~~lnL~YPP~~~~~~~~~k~  166 (171)
                      |+|||++||+|+|..                |.||||+||+||+|||+|||||||||||+++||.|||+++...+++..
T Consensus       192 ~~ItWl~Ph~f~~~~----------------p~dVD~~vm~tFlEFY~tLl~FVnfkLy~~~~l~YPP~~~~~~~~~~~  254 (281)
T PF06732_consen  192 QKITWLVPHQFSQDI----------------PTDVDFRVMLTFLEFYTTLLGFVNFKLYHSLNLVYPPKLDSSLDKEAA  254 (281)
T ss_pred             ceEEEEeccccCCCC----------------CCcccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccchhc
Confidence            999999999999998                999999999999999999999999999999999999999998887653



During mitosis pescadillo closely associates with the periphery of metaphase chromosomes and by late anaphase is associated with nucleolus-derived foci and prenucleolar bodies. Blastomeres in mouse embryos lacking pescadillo arrest at morula stages of development, the nucleoli fail to differentiate and accumulation of ribosomes is inhibited. It has been proposed that in mammalian cells pescadillo is essential for ribosome biogenesis and nucleologenesis and that disruption to its function results in cell cycle arrest []. ; GO: 0042254 ribosome biogenesis, 0005730 nucleolus

>KOG2481|consensus Back     alignment and domain information
>COG5163 NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00