Psyllid ID: psy11460

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------
Protein Sequence
MQKVNIELGPLLSREDMQKVNIEFHDNGTVTFQHYKILEFVPELSVAPNNTRFILPNIPLLRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRVQLNLAVEESNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILEYGFIIFGSLVLIVVFVRAYKSLVFTQENLERGREKLRRGSSFIVNGQHRLMIIRDSYSLLGNHNAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRVQLNLAVEESNIHVVRGFRSITFPIMWVEETLTSQANALKPLMKTGVSLALRMTSMKPFVSITAEELVFGYDDTLTSLANRFFPKGKRPPRKMGLFLGRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPKGLQNISPCQFANLLQSNLSNSLNLPNLFVVSRYYDILKRDRVVPSSWLDKGLDASWKTHSHEGDNLGHLRQHQIDETPNIMNAFPTLIGSVFLVSPFQAALLCSYNYIGLSFLESARGKEFVSLFEILNLPNLFVVSRYYDILKRDRVLPSSWLDKGLDASWKTHVTYYDDSQTTPDVDRNITPLQRVRIIRREKNFTSFPDDSASPYRLFKRFTVPLSSTDVATTTLNGFVFVVTMTPDNTLEMTVKVKPDVPHILIPTLLYLRVKLSSASGSSASIGYGILFQQGRDSDIE
Secondary Structure (PSIPRED)
cccccEEEccEEEEEEEEEEEEEEccccEEEEEEcEEEEEcccccccccccccccccccccccccccEEEEEEccccccccEEEEEEEccccccccccccccccEEccccccccccccccccEEEEEEcccEEEEEEEEEcEEEEccEEEEEEEccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccEEEEEcccccccEEEEEEEEEEEEEccccccccccccEEEcccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHEEEccEEcccccccccccccccccEEEccccEEEcccccccccccccccEEEEccccccccHHHHHHcccccccccccEEEEEEEEccccccEEEEEEEEEEEEcccccEEEccEEEEEEccHHHHHHHHHHHccccccHHHHHHHHHHHcccccEEEEEccEEccccccHHHHHHHHHcccccccccccccccccccccccEEEEEcccccccccccEEEEccccccccccccccccccccccccccccccccccEEEEEEcccEEEEEEEEEcEEEEccEEEEEEcccccccccccccccccccccccccccccccEEcccccccccccccccEEEcccccccccccccccccccccccccccccccEEEEEEEccccccccccccccccccccccccccEEEEEEEEccccccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHcccccccccEEEEEEcccccccccccccccccEEEEEEEccccccccccccccccccccEEEccccccccEEEEccEEEEEEEcccccEEEEEEEccccccEEHHEEEEEEEEEccccccccEEEEEEEEEcccccccc
Secondary Structure Prediction (SSPRO)
cccEEHHHcHHHHHHHHHHHHHHHHccccEEccHHHHHccccccccccccccccEEEEEEccccccccEEEEEcccccHHHHcEEEEcccccccccccccccccEcccccccccccccccccEEEEEccHHHcEEEEEEEccEEEccEEEEEEEccHHHccccccccccccccccccccccccEEEcccccccccEEEEccccccccHHHHHHHccccccHHHccEEEEEccccccEEEHHEEEEEEEEEcccccccccccccEEEEEEEEEccHccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHcccccEEEccccccccHHHHHHHHccccccEEEEEEEEEcccHHHHHHcccccccccccEEEEEcccccccccccEEEEEEEEEEccccccccccccEEEEEHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccEEEEEHHEEEEccccHHHHHHHHcccccccccccEEEEEccccccccEEEEEcccccHHHHcEEEEcccccccccccccccccEcccccccccccccccccEEEEEccHHHcEEEEEEEccEEEccEEEEEEEccHHHccccccccccccccccccccccccEEEcccccccccccccccEEEEccccccccccHHHccccEEEEEEEccccccccHHHccEEEHccccEEEEEccccHHHHHccccEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccEEEEEEHHHHHHHcccccccHHHccccccccEEEEEEccccccccccccccHHHEEEEEEEcccccccccccccccEHEEEEEccccccccEEEccccEEEEEEEcccccEEEEEEEcccccEEEEcEEEEEEEEEcccccccccHcHHHEEccccccccc
Coil and Loop (DISEMBL)
mqkvnielgpllsredmQKVNIefhdngtvtfqHYKIlefvpelsvapnntrfilpnipllrngtisevqtiytghggmenfgymdklngldhlpywdeapcnaikasegsffpprdltksdlvhvydkdlcriwplryrrdvekdglkagyytpddeifspgesqpenkcycpgqtkcppkglqnispcqfdapvflsfphfykadpelldavegltpnqekhETFFkiqpklgvpLEAAVRVQLNLaveesnihvvrgfrsitfPIMWveegigdlppniHRWIYLAtsfapniapilEYGFIIFGSLVLIVVFVRAYKSLVFTQENLERGREKlrrgssfivnGQHRLMIIRDSysllgnhnapvflsfphfykadpelldavegltpnqekhETFFkiqpklgvpLEAAVRVQLNLaveesnihvvrgfrsitfPIMWVEETLTSQANALKPLMKTGVSLALRmtsmkpfvsITAEELVFGYDDTLTSLanrffpkgkrpprkmglflgrngtiseVQTIytghggmenfgymdklngldhlpywdeapcnaikasegsffpprdltksdlvhvydkdlcriwplryrrdvekdglkagyytpddeifspgesqpenkcycpgqtkcppkglqnispcqFANLLQSnlsnslnlpnlfvvsryydilkrdrvvpsswldkgldaswkthshegdnlghlrqhqidetpnimnafptligsvflvSPFQAALLCSYNYIGLSFLESARGKEFVSLFEilnlpnlfvvsRYYDIlkrdrvlpsswldkgldaswkthvtyyddsqttpdvdrnitplqRVRIIRreknftsfpddsaspyrlfkrftvplsstdvattTLNGFVFVVTmtpdntlemtvkvkpdvphilipTLLYLRVKlssasgssasigYGILfqqgrdsdie
Flexible Loop (DISEMBL)
mqkvnielgpllsredMQKVNIEFHDNGTVTFQHYKILEFVPELSVAPNNTRFIlpnipllrngtISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPrdltksdlvhvydkdlcriwplryrrdvekdglkagyytpDDEIFSPGESQPENKCYCPGQTKCPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRVQLNLaveesnihvvrgFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILEYGFIIFGSLVLIVVFVRAYKSLVftqenlergreklrrgssfivngqHRLMIIRDSYSLLGNHNAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRVQLNLaveesnihvvrGFRSITFPIMWVEETLTSQANALKPLMKTGVSLALRMTSMKPFVSITAEELVFGYDDTLTSLAnrffpkgkrpprkmGLFLGRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPrdltksdlvhvydkdlcriwplryrrdvekdglkagyytpDDEIFSPGESQPENKCYCPGQTKCPPKGLQNISPCQFANLLQSNLSNSLNLPNLFVVSRYYDILkrdrvvpsswldKGLDASWKTHSHEGDNLGHLRQHQIDETPNIMNAFPTLIGSVFLVSPFQAALLCSYNYIGLSFLESARGKEFVSLFeilnlpnlfVVSRYYDILkrdrvlpsswldkgldasWKTHVtyyddsqttpdvdrnitplqrvriirreknftsfpddsaspyrLFKRFtvplsstdvatttLNGFVFVVTMTPDNTLEMTVKVKPDVPHILIPTLLYLRVKLSSasgssasigygilfqqgrdsdie
Low Complexity Region (SEG)
MQKVNIELGPLLSREDMQKVNIEFHDNGTVTFQHYKILEFVPELSVAPNNTRFILPNIPLLRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRVQLNLAVEESNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILEYGFIIFGSLVLIVVFVRAYKSLVFTQENLERGREKLRRGSSFIVNGQHRLMIIRDSYSLLGNHNAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRVQLNLAVEESNIHVVRGFRSITFPIMWVEETLTSQANALKPLMKTGVSLALRMTSMKPFVSITAEELVFGYDDTLTSLANRFFPKGKRPPRKMGLFLGRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPKGLQNISPCQFAnllqsnlsnslnlpnlFVVSRYYDILKRDRVVPSSWLDKGLDASWKTHSHEGDNLGHLRQHQIDETPNIMNAFPTLIGSVFLVSPFQAALLCSYNYIGLSFLESARGKEFVSLFEILNLPNLFVVSRYYDILKRDRVLPSSWLDKGLDASWKTHVTYYDDSQTTPDVDRNITPLQRVRIIRREKNFTSFPDDSASPYRLFKRFTVPLSSTDVATTTLNGFVFVVTMTPDNTLEMTVKVKPDVPHILIPTLLYLRVKLssasgssasigygiLFQQGRDSDIE
Disordered region (IsUnstruct)
*****************QKVNIEFHDNGTVTFQHYKILEFVPELSVAPNNTRFILPNIPLLRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPD**************CYCPGQTKCPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRVQLNLAVEESNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILEYGFIIFGSLVLIVVFVRAYKSLVFTQENLERGREKLRRGSSFIVNGQHRLMIIRDSYSLLGNHNAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRVQLNLAVEESNIHVVRGFRSITFPIMWVEETLTSQANALKPLMKTGVSLALRMTSMKPFVSITAEELVFGYDDTLTSLANRFFPKGK**PRKMGLFLGRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPD**************CYCPGQTKCPPKGLQNISPCQFANLLQSNLSNSLNLPNLFVVSRYYDILKRDRVVPSSWLDKGLDASWKTHSH*GDNLGHLRQHQIDETPNIMNAFPTLIGSVFLVSPFQAALLCSYNYIGLSFLESARGKEFVSLFEILNLPNLFVVSRYYDILKRDRVLPSSWLDKGLDASWKTHVTYYDDSQTTPDVDRNITPLQRVRIIRREKNFTSFPDDSASPYRLFKRFTVPLSSTDVATTTLNGFVFVVTMTPDNTLEMTVKVKPDVPHILIPTLLYLRVKLSSA***SASIGYGILF*********
Disordered Region (DISOPRED)
*QKVNIELGPLLSREDMQKVNIEFHDNGTVTFQHYKILEFVPELSVAPNNTRFILPNIPLLRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRVQLNLAVEESNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILEYGFIIFGSLVLIVVFVRAYKSLVFTQENLERGREKLRRGSSFIVNGQHRLMIIRDSYSLLGNHNAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRVQLNLAVEESNIHVVRGFRSITFPIMWVEETLTSQANALKPLMKTGVSLALRMTSMKPFVSITAEELVFGYDDTLTSLANRFFPKGKRPPRKMGLFLGRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPKGLQNISPCQFANLLQSNLSNSLNLPNLFVVSRYYDILKRDRVVPSSWLDKGLDASWKTHSHEGDNLGHLRQHQIDETPNIMNAFPTLIGSVFLVSPFQAALLCSYNYIGLSFLESARGKEFVSLFEILNLPNLFVVSRYYDILKRDRV************SWKTHVTYY***************LQRVRI******************RLFKRFTVPLSSTDVATTTLNGFVFVVTMTPDNTLEMTVKVKPDVPHILIPTLLYLRVKL********SIGYGILFQ*G******
Disordered Region (DISEMBL)
MQKVNIELGPLLSREDMQKVNIEFHDNGTVTFQHYKILEFVPELSVAPNNTRFILPNIPLLRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRVQLNLAVEESNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILEYGFIIFGSLVLIVVFVRAYKSLVFTQENLERGREKLRRGSSFIVNGQHRLMIIRDSYSLLGNHNAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRVQLNLAVEESNIHVVRGFRSITFPIMWVEETLTSQANALKPLMKTGVSLALRMTSMKPFVSITAEELVFGYDDTLTSLANRFFPKGKRPPRKMGLFLGRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPKGLQNISPCQFANLLQSNLSNSLNLPNLFVVSRYYDILKRDRVVPSSWLDKGLDASWKTHSHEGDNLGHLRQHQIDETPNIMNAFPTLIGSVFLVSPFQAALLCSYNYIGLSFLESARGKEFVSLFEILNLPNLFVVSRYYDILKRDRVLPSSWLDKGLDASWKTHVTYYDDSQTTPDVDRNITPLQRVRIIRREKNFTSFPDDSASPYRLFKRFTVPLSSTDVATTTLNGFVFVVTMTPDNTLEMTVKVKPDVPHILIPTLLYLRVKLSSASGSSASIGYGILFQQGRDSDIE
Disordered Region (DISPRO)
*QKVNIELGPLLSREDMQKVNIEFHDNGTVTFQHYKILEFVPELSVAPNNTRFILPNIPLLRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRVQLNLAVEESNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILEYGFIIFGSLVLIVVFVRAYKSLVFTQENLERGREKLRRGSSFIVNGQHRLMIIRDSYSLLGNHNAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRVQLNLAVEESNIHVVRGFRSITFPIMWVEETLTSQANALKPLMKTGVSLALRMTSMKPFVSITAEELVFGYDDTLTSLANRFFPKGKRPPRKMGLFLGRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPKGLQNISPCQFANLLQSNLSNSLNLPNLFVVSRYYDILKRDRVVPSSWLDKGLDASWKTHSHEGDNLGHLRQHQIDETPNIMNAFPTLIGSVFLVSPFQAALLCSYNYIGLSFLESARGKEFVSLFEILNLPNLFVVSRYYDILKRDRVLPSSWLDKGLDASWKTHVTYYDDSQTTPDVDRNITPLQRVRIIRREKNFTSFPDDSASPYRLFKRFTVPLSSTDVATTTLNGFVFVVTMTPDNTLEMTVKVKPDVPHILIPTLLYLRVKLS*******SIGY*ILFQQG******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQKVNIELGPLLSREDMQKVNIEFHDNGTVTFQHYKILEFVPELSVAPNNTRFILPNIPLLRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRVQLNLAVEESNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILEYGFIIFGSLVLIVVFVRAYKSLVFTQENLERGREKLRRGSSFIVNGQHRLMIIRDSYSLLGNHNAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRVQLNLAVEESNIHVVRGFRSITFPIMWVEETLTSQANALKPLMKTGVSLALRMTSMKPFVSITAEELVFGYDDTLTSLANRFFPKGKRPPRKMGLFLGRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPKGLQNISPCQFANLLQSNLSNSLNLPNLFVVSRYYDILKRDRVVPSSWLDKGLDASWKTHSHEGDNLGHLRQHQIDETPNIMNAFPTLIGSVFLVSPFQAALLCSYNYIGLSFLESARGKEFVSLFEILNLPNLFVVSRYYDILKRDRVLPSSWLDKGLDASWKTHVTYYDDSQTTPDVDRNITPLQRVRIIRREKNFTSFPDDSASPYRLFKRFTVPLSSTDVATTTLNGFVFVVTMTPDNTLEMTVKVKPDVPHILIPTLLYLRVKLSSASGSSASIGYGILFQQGRDSDIE
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	927	2.2.26 [Sep-21-2011]
Q8SQC1	509	Scavenger receptor class	yes	N/A	0.274	0.499	0.302	5e-33
Q27367	457	Protein croquemort OS=Dro	no	N/A	0.216	0.439	0.330	3e-32
O18824	509	Scavenger receptor class	yes	N/A	0.252	0.459	0.319	3e-32
Q61009	509	Scavenger receptor class	no	N/A	0.222	0.404	0.344	3e-32
Q8WTV0	552	Scavenger receptor class	no	N/A	0.222	0.373	0.339	9e-32
P97943	509	Scavenger receptor class	yes	N/A	0.222	0.404	0.334	2e-31
Q14108	478	Lysosome membrane protein	no	N/A	0.226	0.439	0.344	2e-30
O35114	478	Lysosome membrane protein	no	N/A	0.235	0.456	0.333	3e-30
Q60417	509	Scavenger receptor class	no	N/A	0.250	0.455	0.304	9e-30
Q9U3U2	522	Sensory neuron membrane p	N/A	N/A	0.285	0.507	0.294	1e-29

>sp|Q8SQC1|SCRB1_PIG Scavenger receptor class B member 1 OS=Sus scrofa GN=SCARB1 PE=2 SV=1

 Score =  144 bits (362), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 126/261 (48%), Gaps = 7/261 (2%)

Query: 63  NGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSD 122
           N + S + T++TG         +DK NGL  + +W    CN I  + G  + P    +S 
Sbjct: 212 NNSDSGLFTVFTGVKDFSRIHLVDKWNGLSKVNFWHSDQCNMINGTSGQMWAPFMTPESS 271

Query: 123 LVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPK 182
           L   Y  + CR   L Y+     +G+    +   + +F+ G   P N+ +CP    C   
Sbjct: 272 L-EFYSPEACRSMKLIYKEQGVFEGIPTFRFVAPNTLFANGSVYPPNEGFCP----CMES 326

Query: 183 GLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAV 242
           G+QN+S C+F+AP+FLS PHFY ADP L +AV GL PN E+H  F  I P  G+P+  +V
Sbjct: 327 GIQNVSTCRFNAPLFLSHPHFYNADPVLAEAVSGLHPNTEEHSLFLDIHPVTGIPMNCSV 386

Query: 243 RVQLNLAVEE-SNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILE 301
           ++QL+L ++    I        +  P++W  E  G +     +  Y      P +    +
Sbjct: 387 KLQLSLYIKSVKGIGQTGKIEPVVLPLLWFAES-GAMEGETLQTFYTQLVLMPKVLHYAQ 445

Query: 302 YGFIIFGSLVLIVVFVRAYKS 322
           Y  +  G ++L +  V   +S
Sbjct: 446 YVLLALGCVLLFIPIVYQIRS 466

Receptor for different ligands such as phospholipids, cholesterol ester, lipoproteins, phosphatidylserine and apoptotic cells. Probable receptor for HDL, located in particular region of the plasma membrane, called caveolae. Facilitates the flux of free and esterified cholesterol between the cell surface and extracellular donors and acceptors, such as HDL and to a lesser extent, apoB-containing lipoproteins and modified lipoproteins. Probably involved in the phagocytosis of apoptotic cells, via its phosphatidylserine binding activity (By similarity). Plays an important role in the uptake of HDL cholesteryl ester.
Sus scrofa (taxid: 9823)

>sp|Q27367|CRQ_DROME Protein croquemort OS=Drosophila melanogaster GN=crq PE=1 SV=2

 Score =  141 bits (355), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 109/206 (52%), Gaps = 5/206 (2%)

Query: 71  TIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSDLVHVYDKD 130
           TI+TG   + N G +   NG     ++ E PC  +  + G  FPP+ +  +D + ++  D
Sbjct: 226 TIHTGTDDISNLGRLTHWNGKSETGFY-EMPCGIVNGTTGDMFPPK-MNVNDEITIFATD 283

Query: 131 LCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQ--TKCPPKGLQNIS 188
            CR   LR R   E  GL A  +   +E    GE+ P   C+C      +CP  G+    
Sbjct: 284 ACRFMNLRPRGTYENHGLTATKWVGTEETLDSGENYPNQACFCDEARFDECPKTGVVECK 343

Query: 189 PCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRVQLNL 248
            C+  AP++ SFPHFY AD   +DAV G+ P +EKHE F  ++P  GVP++   R+Q+N+
Sbjct: 344 ACRDKAPIYSSFPHFYLADQSYVDAVSGMKPEKEKHEFFLAVEPITGVPVQVHGRIQINM 403

Query: 249 AVE-ESNIHVVRGFRSITFPIMWVEE 273
            +E + +  + RG + +  P+ W ++
Sbjct: 404 MIEPDDDFDIYRGVQKVLMPMFWFDQ 429

Macrophage receptor for apoptotic cells.

Drosophila melanogaster (taxid: 7227)

>sp|O18824|SCRB1_BOVIN Scavenger receptor class B member 1 OS=Bos taurus GN=SCARB1 PE=2 SV=1

 Score =  141 bits (355), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 117/241 (48%), Gaps = 7/241 (2%)

Query: 63  NGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSD 122
           N + S + T++TG         +DK NG+  + YW    CN I  + G  + P    +S 
Sbjct: 212 NNSDSGLFTVFTGVKNFSRIHLVDKWNGVSKVNYWHSDQCNMINGTSGQMWAPFMTPESS 271

Query: 123 LVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPK 182
           L   Y  + CR   L Y+      G+    +     +F+ G   P N+ +CP    C   
Sbjct: 272 L-EFYSPEACRSMKLVYKEQGVFGGIPTFRFVAPSTLFANGSVYPPNEGFCP----CRES 326

Query: 183 GLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAV 242
           G+QN+S C+F+AP+FLS PHFY ADP L +AV GL PN ++H  F  I P  G+P+  +V
Sbjct: 327 GIQNVSTCRFNAPLFLSHPHFYNADPVLAEAVSGLHPNPKEHSLFLDIHPVTGIPMNCSV 386

Query: 243 RVQLNLAVEE-SNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILE 301
           ++QL+L V+    I      + +  P+MW EE  G +        Y+     P +    +
Sbjct: 387 KLQLSLFVKSVKGIGQTGNIQPVVLPLMWFEES-GAMEGETLETFYIQLVLMPKVLHYAQ 445

Query: 302 Y 302
           Y
Sbjct: 446 Y 446

Receptor for different ligands such as phospholipids, cholesterol ester, lipoproteins, phosphatidylserine and apoptotic cells. Probable receptor for HDL, located in particular region of the plasma membrane, called caveolae. Facilitates the flux of free and esterified cholesterol between the cell surface and extracellular donors and acceptors, such as HDL and to a lesser extent, apoB-containing lipoproteins and modified lipoproteins. Probably involved in the phagocytosis of apoptotic cells, via its phosphatidylserine binding activity (By similarity). Plays an important role in the uptake of HDL cholesteryl ester.

Bos taurus (taxid: 9913)

>sp|Q61009|SCRB1_MOUSE Scavenger receptor class B member 1 OS=Mus musculus GN=Scarb1 PE=1 SV=1

 Score =  141 bits (355), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 109/212 (51%), Gaps = 6/212 (2%)

Query: 63  NGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSD 122
           N + S V T++TG         +DK NGL  + YW    CN I  + G  + P    +S 
Sbjct: 212 NNSNSGVFTVFTGVQNFSRIHLVDKWNGLSKIDYWHSEQCNMINGTSGQMWAPFMTPESS 271

Query: 123 LVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPK 182
           L   +  + CR   L Y      +G+    +T  D +F+ G   P N+ +CP    C   
Sbjct: 272 L-EFFSPEACRSMKLTYNESRVFEGIPTYRFTAPDTLFANGSVYPPNEGFCP----CRES 326

Query: 183 GLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAV 242
           G+QN+S C+F AP+FLS PHFY ADP L +AV GL PN ++H  F  I P  G+P+  +V
Sbjct: 327 GIQNVSTCRFGAPLFLSHPHFYNADPVLSEAVLGLNPNPKEHSLFLDIHPVTGIPMNCSV 386

Query: 243 RVQLNLAVEE-SNIHVVRGFRSITFPIMWVEE 273
           ++QL+L ++    I        +  P++W E+
Sbjct: 387 KMQLSLYIKSVKGIGQTGKIEPVVLPLLWFEQ 418

Receptor for different ligands such as phospholipids, cholesterol ester, lipoproteins, phosphatidylserine and apoptotic cells. Probable receptor for HDL, located in particular region of the plasma membrane, called caveolae. Facilitates the flux of free and esterified cholesterol between the cell surface and extracellular donors and acceptors, such as HDL and to a lesser extent, apoB-containing lipoproteins and modified lipoproteins. Probably involved in the phagocytosis of apoptotic cells, via its phosphatidylserine binding activity (By similarity). Plays an important role in the uptake of HDL cholesteryl ester.

Mus musculus (taxid: 10090)

>sp|Q8WTV0|SCRB1_HUMAN Scavenger receptor class B member 1 OS=Homo sapiens GN=SCARB1 PE=1 SV=1

 Score =  139 bits (350), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 109/212 (51%), Gaps = 6/212 (2%)

Query: 63  NGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSD 122
           N + S + T++TG   +     +DK NGL  + +W    CN I  + G  +PP    +S 
Sbjct: 212 NNSDSGLFTVFTGVQNISRIHLVDKWNGLSKVDFWHSDQCNMINGTSGQMWPPFMTPESS 271

Query: 123 LVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPK 182
           L   Y  + CR   L Y+     +G+    +     +F+ G   P N+ +CP    C   
Sbjct: 272 L-EFYSPEACRSMKLMYKESGVFEGIPTYRFVAPKTLFANGSIYPPNEGFCP----CLES 326

Query: 183 GLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAV 242
           G+QN+S C+F AP+FLS PHF  ADP L +AV GL PNQE H  F  I P  G+P+  +V
Sbjct: 327 GIQNVSTCRFSAPLFLSHPHFLNADPVLAEAVTGLHPNQEAHSLFLDIHPVTGIPMNCSV 386

Query: 243 RVQLNLAVEE-SNIHVVRGFRSITFPIMWVEE 273
           ++QL+L ++  + I        +  P++W  E
Sbjct: 387 KLQLSLYMKSVAGIGQTGKIEPVVLPLLWFAE 418

Receptor for different ligands such as phospholipids, cholesterol ester, lipoproteins, phosphatidylserine and apoptotic cells. Probable receptor for HDL, located in particular region of the plasma membrane, called caveolae. Facilitates the flux of free and esterified cholesterol between the cell surface and extracellular donors and acceptors, such as HDL and to a lesser extent, apoB-containing lipoproteins and modified lipoproteins. Probably involved in the phagocytosis of apoptotic cells, via its phosphatidylserine binding activity. Receptor for hepatitis C virus glycoprotein E2. Binding between SCARB1 and E2 was found to be independent of the genotype of the viral isolate. Plays an important role in the uptake of HDL cholesteryl ester.

Homo sapiens (taxid: 9606)

>sp|P97943|SCRB1_RAT Scavenger receptor class B member 1 OS=Rattus norvegicus GN=Scarb1 PE=1 SV=1

 Score =  138 bits (347), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 110/212 (51%), Gaps = 6/212 (2%)

Query: 63  NGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSD 122
           N + S V T++TG         +DK NGL  + YW    CN I  + G  + P    +S 
Sbjct: 212 NDSSSGVFTVFTGVQNFSKIHLVDKWNGLSEVNYWHSEQCNMINGTAGQMWAPFMTPESS 271

Query: 123 LVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPK 182
           L   +  + CR   L Y+     +G+    +T  D +F+ G   P N+ +CP    C   
Sbjct: 272 L-EFFSPEACRSMKLTYQESRVFEGIPTYRFTAPDTLFANGSVYPPNEGFCP----CRES 326

Query: 183 GLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAV 242
           G+QN+S C+F AP+FLS PHFY ADP L +AV GL P+ ++H  F  I P  G+P+  +V
Sbjct: 327 GIQNVSTCRFGAPLFLSQPHFYNADPVLSEAVLGLNPDPKEHSLFLDIHPVTGIPMNCSV 386

Query: 243 RVQLNLAVEE-SNIHVVRGFRSITFPIMWVEE 273
           ++QL+L ++    +        +  P++W E+
Sbjct: 387 KMQLSLYIKSVKGVGQTGKIEPVVLPLLWFEQ 418

Receptor for different ligands such as phospholipids, cholesterol ester, lipoproteins, phosphatidylserine and apoptotic cells. Probable receptor for HDL, located in particular region of the plasma membrane, called caveolae. Facilitates the flux of free and esterified cholesterol between the cell surface and extracellular donors and acceptors, such as HDL and to a lesser extent, apoB-containing lipoproteins and modified lipoproteins. Probably involved in the phagocytosis of apoptotic cells, via its phosphatidylserine binding activity (By similarity). Plays an important role in the uptake of HDL cholesteryl ester.

Rattus norvegicus (taxid: 10116)

>sp|Q14108|SCRB2_HUMAN Lysosome membrane protein 2 OS=Homo sapiens GN=SCARB2 PE=1 SV=2

 Score =  135 bits (339), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 115/215 (53%), Gaps = 5/215 (2%)

Query: 62  RNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKS 121
           +NGT        TG     NF  + + NG   L +W    CN I  ++G  F P  +TK 
Sbjct: 205 KNGTNDGDYVFLTGEDSYLNFTKIVEWNGKTSLDWWITDKCNMINGTDGDSFHPL-ITKD 263

Query: 122 DLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPP 181
           ++++V+  D CR   + +       GL A  Y    EI +   +  +N  +C  +  C  
Sbjct: 264 EVLYVFPSDFCRSVYITFSDYESVQGLPAFRYKVPAEILA---NTSDNAGFCIPEGNCLG 320

Query: 182 KGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAA 241
            G+ N+S C+  AP+ +SFPHFY+AD   + A+EG+ PNQE HETF  I P  G+ L+AA
Sbjct: 321 SGVLNVSICKNGAPIIMSFPHFYQADERFVSAIEGMHPNQEDHETFVDINPLTGIILKAA 380

Query: 242 VRVQLNLAVEESNIHVVRG-FRSITFPIMWVEEGI 275
            R Q+N+ V++ +  V  G  R++ FP+M++ E +
Sbjct: 381 KRFQINIYVKKLDDFVETGDIRTMVFPVMYLNESV 415

Act as a lysosomal receptor for glucosylceramidase (GBA) targeting.

Homo sapiens (taxid: 9606)

>sp|O35114|SCRB2_MOUSE Lysosome membrane protein 2 OS=Mus musculus GN=Scarb2 PE=1 SV=3

 Score =  134 bits (337), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 119/225 (52%), Gaps = 7/225 (3%)

Query: 54  ILPNIPLL--RNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGS 111
           + PN  L   RNGT        TG     NF  + + NG   L +W    CN I  ++G 
Sbjct: 195 VSPNFGLFYERNGTNDGEYVFLTGEDNYLNFSKIVEWNGKTSLDWWTTDTCNMINGTDGD 254

Query: 112 FFPPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKC 171
            F P  ++K ++++++  DLCR   + +      +GL A  Y    EI +   +  EN  
Sbjct: 255 SFHPL-ISKDEVLYLFPSDLCRSVHITFSSFENVEGLPAFRYKVPAEILA---NTSENAG 310

Query: 172 YCPGQTKCPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQ 231
           +C  +  C   G+ NIS C+  AP+ +SFPHFY+AD + + A++G+ PN+E+HE+F  I 
Sbjct: 311 FCIPEGNCMDSGVLNISICKNGAPIIMSFPHFYQADEKFVSAIKGMHPNKEEHESFVDIN 370

Query: 232 PKLGVPLEAAVRVQLNLAVEESNIHVVRG-FRSITFPIMWVEEGI 275
           P  G+ L  A R Q+N  V + +  V  G  R++ FP+M++ E +
Sbjct: 371 PLTGIILRGAKRFQINTYVRKLDDFVETGDIRTMVFPVMYLNESV 415

Act as a lysosomal receptor for glucosylceramidase (GBA) targeting.

Mus musculus (taxid: 10090)

>sp|Q60417|SCRB1_CRIGR Scavenger receptor class B member 1 OS=Cricetulus griseus GN=SCARB1 PE=2 SV=1

 Score =  133 bits (334), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 11/243 (4%)

Query: 63  NGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSD 122
           N + S + T++TG         +D+ NGL  + YW    CN I  + G  + P    +S 
Sbjct: 212 NNSDSGLFTVFTGVQNFSKIHLVDRWNGLSKVNYWHSEQCNMINGTSGQMWAPFMTPQSS 271

Query: 123 LVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPK 182
           L   +  + CR   L Y      +G+    +T    +F+ G   P N+ +CP    C   
Sbjct: 272 L-EFFSPEACRSMKLTYHDSGVFEGIPTYRFTAPKTLFANGSVYPPNEGFCP----CLES 326

Query: 183 GLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAV 242
           G+QN+S C+F AP+FLS PHFY ADP L +AV GL P+  +H  F  I P  G+P+  +V
Sbjct: 327 GIQNVSTCRFGAPLFLSHPHFYNADPVLSEAVLGLNPDPREHSLFLDIHPVTGIPMNCSV 386

Query: 243 RVQLNLAVEE-SNIHVVRGFRSITFPIMWVEE--GIGDLPPNIHRWIYLATSFAPNIAPI 299
           ++Q++L ++    I        +  P++W E+   +G  P N     Y      P +   
Sbjct: 387 KLQISLYIKAVKGIGQTGKIEPVVLPLLWFEQSGAMGGEPLNT---FYTQLVLMPQVLQY 443

Query: 300 LEY 302
           ++Y
Sbjct: 444 VQY 446

Receptor for different ligands such as phospholipids, cholesterol ester, lipoproteins, phosphatidylserine and apoptotic cells. Probable receptor for HDL, located in particular region of the plasma membrane, called caveolae. Facilitates the flux of free and esterified cholesterol between the cell surface and extracellular donors and acceptors, such as HDL and to a lesser extent, apoB-containing lipoproteins and modified lipoproteins. Probably involved in the phagocytosis of apoptotic cells, via its phosphatidylserine binding activity (By similarity). Plays an important role in the uptake of HDL cholesteryl ester.

Cricetulus griseus (taxid: 10029)

>sp|Q9U3U2|SNMP1_BOMMO Sensory neuron membrane protein 1 OS=Bombyx mori GN=SNMP1 PE=2 SV=1

 Score =  132 bits (332), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 141/278 (50%), Gaps = 13/278 (4%)

Query: 48  PNNT-RFILPNIPLLRNGTIS-EVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAI 105
           PNN  RF L  +   RN ++   V T+  G   + + G +  ++G   +  W ++ CN  
Sbjct: 216 PNNQLRFSLFGV---RNNSVDPHVVTVKRGVQNVMDVGRVVAIDGKTKMNVWRDS-CNEY 271

Query: 106 KASEGSFFPPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGES 165
           + ++G+ FPP  LT  D +  +  DLCR +   +++    +G+K   Y  +   F+   +
Sbjct: 272 QGTDGTVFPPF-LTHKDRLQSFSGDLCRSFKPWFQKKTSYNGIKTNRYVANIGDFA---N 327

Query: 166 QPENKCYCPGQTKCPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHE 225
            PE +CYC    KCPPKGL ++  C   AP+F+S PH+ + DPELL  V+GL PN ++H 
Sbjct: 328 DPELQCYCDSPDKCPPKGLMDLYKC-IKAPMFVSMPHYLEGDPELLKNVKGLNPNAKEHG 386

Query: 226 TFFKIQPKLGVPLEAAVRVQLNLAVEES-NIHVVRGFRSITFPIMWVEEGIGDLPPNIHR 284
                +P  G P+ A  R+Q N+ + +S  + +++       P+ W+EEG+  L     +
Sbjct: 387 IEIDFEPISGTPMVAKQRIQFNIQLLKSEKMDLLKDLPGTIVPLFWIEEGL-SLNKTFVK 445

Query: 285 WIYLATSFAPNIAPILEYGFIIFGSLVLIVVFVRAYKS 322
            +         +  ++ +  I FGSL +I   +  +K 
Sbjct: 446 MLKSQLFIPKRVVSVVCWCMISFGSLGVIAAVIFHFKG 483

Plays an olfactory role that is not restricted to pheromone sensitivity.

Bombyx mori (taxid: 7091)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	927
307190184	416	Scavenger receptor class B member 1 [Cam	0.384	0.855	0.605	1e-125
328723292	587	PREDICTED: scavenger receptor class B me	0.326	0.516	0.662	1e-124
307199127	502	Scavenger receptor class B member 1 [Har	0.382	0.707	0.495	1e-111
345492480	590	PREDICTED: scavenger receptor class B me	0.381	0.6	0.497	1e-109
340723176	574	PREDICTED: scavenger receptor class B me	0.386	0.623	0.495	1e-109
242017472	534	scavenger receptor class B member, putat	0.331	0.574	0.598	1e-108
383850289	574	PREDICTED: scavenger receptor class B me	0.327	0.529	0.612	1e-107
350418658	574	PREDICTED: scavenger receptor class B me	0.386	0.623	0.495	1e-107
380012125	562	PREDICTED: scavenger receptor class B me	0.325	0.537	0.590	1e-107
157111859	530	epithelial membrane protein [Aedes aegyp	0.320	0.560	0.619	1e-105

>gi|307190184|gb|EFN74299.1| Scavenger receptor class B member 1 [Camponotus floridanus]

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 218/360 (60%), Positives = 276/360 (76%), Gaps = 4/360 (1%)

Query: 7   ELGPLLSREDMQKVNIEFHDNGTVTFQHYKILEFVPELSVAPNNTRFILPNIPLLRNGTI 66
           E+GP + REDM+KVNI FH+NGTV++QH KIL FVPE+S    N + I+PNIPLLRNGT+
Sbjct: 46  EIGPFVYREDMEKVNIVFHNNGTVSYQHKKILNFVPEMS-KDENIKVIVPNIPLLRNGTL 104

Query: 67  SEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSDLVHV 126
           SE+ TI+TGH  M+ FG +++LNGLDHLPYW  APCN+I ASEGSFFPPRD T +++VHV
Sbjct: 105 SEISTIFTGHTDMKEFGLINRLNGLDHLPYWPTAPCNSITASEGSFFPPRDRTGANIVHV 164

Query: 127 YDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFS-PGESQPENKCYCP-GQTKCPPKGL 184
           +DKD CR  PL+YR  VEK  +KA  YTP D +F  P ++  EN+C+C  G   CPP+GL
Sbjct: 165 WDKDFCRTLPLQYRGPVEKTSIKADLYTPPDVVFGLPNKTFRENECFCSDGIANCPPQGL 224

Query: 185 QNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRV 244
           Q+ISPCQ+ APV+LSFPHFYKADP+LL+AV+GL P +  H+T+FKIQPKLGVP+EA  RV
Sbjct: 225 QDISPCQYSAPVYLSFPHFYKADPKLLNAVDGLKPMENLHQTYFKIQPKLGVPIEAKARV 284

Query: 245 QLNLAVE-ESNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILEYG 303
           QLNL VE + NI VV+ F  I FPIMW+EEG+ +L P++ R IYLAT+FA   AP + YG
Sbjct: 285 QLNLKVERQRNIAVVKNFPDIVFPIMWIEEGVEELTPSMRRLIYLATTFADIAAPCVTYG 344

Query: 304 FIIFGSLVLIVVFVRAYKSLVFTQENLERGREKLRRGSSFIVNGQHRLMIIRDSYSLLGN 363
            I+ G  V+I VFV+AY S V T E +E G+  +RRGSSF++ GQ+RL+  RDSY LL N
Sbjct: 345 MILVGLTVIITVFVKAYNSPVLTHEAIELGKRTIRRGSSFLITGQNRLLAGRDSYVLLNN 404

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328723292|ref|XP_003247810.1| PREDICTED: scavenger receptor class B member 1-like isoform 2 [Acyrthosiphon pisum] gi|328723294|ref|XP_001945560.2| PREDICTED: scavenger receptor class B member 1-like isoform 1 [Acyrthosiphon pisum] gi|328723296|ref|XP_003247811.1| PREDICTED: scavenger receptor class B member 1-like isoform 3 [Acyrthosiphon pisum]

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 202/305 (66%), Positives = 248/305 (81%), Gaps = 2/305 (0%)

Query: 60  LLRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLT 119
           L+RNGT+ EV TIYTGH GMENFG +D++NG++ LP+W +  CN+IKASEGSFFPPR+ T
Sbjct: 270 LMRNGTLDEVSTIYTGHNGMENFGLLDRVNGMEELPFW-KGSCNSIKASEGSFFPPREFT 328

Query: 120 KSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKC 179
           KSDLVHVYDKDLCR+W LRYR+DV KDG+ AGYYTPDD +    +  P+N C+C   T C
Sbjct: 329 KSDLVHVYDKDLCRVWALRYRKDVVKDGITAGYYTPDDNLLETVDKNPDNACFCEDDTDC 388

Query: 180 PPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLE 239
             KGLQ I PCQF+APV+LSFPHFYKADP+LL+ VEGL+P+QEKHETF KIQP+LGVPLE
Sbjct: 389 TVKGLQYIGPCQFNAPVYLSFPHFYKADPKLLEDVEGLSPDQEKHETFLKIQPRLGVPLE 448

Query: 240 AAVRVQLNLAVEESNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPI 299
           A V+VQLNL VE+SNI+    FRSITFPIMW+EEG+ DLP NIHRWIY+AT+F     P+
Sbjct: 449 ARVKVQLNLKVEQSNIYPTSNFRSITFPIMWLEEGVSDLPDNIHRWIYMATTFVDTAVPL 508

Query: 300 LEYGFIIFGSLVLIVVFVRAYKSLVFTQENLERGREK-LRRGSSFIVNGQHRLMIIRDSY 358
             YG I+ G+LVL+ VFVR Y  +VF++EN+ERGR+  LRRGSS +VNGQHRL+I+R+SY
Sbjct: 509 FTYGLILGGALVLVAVFVRTYHQIVFSRENIERGRQSILRRGSSILVNGQHRLLIVRESY 568

Query: 359 SLLGN 363
             + N
Sbjct: 569 HRISN 573

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307199127|gb|EFN79837.1| Scavenger receptor class B member 1 [Harpegnathos saltator]

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/426 (49%), Positives = 266/426 (62%), Gaps = 71/426 (16%)

Query: 7   ELGPLLSREDMQKVNIEFHDNGTVTFQHYKILEFV----------------PELSVAP-- 48
           E+GP + REDM+KVNI FH+NGTV++QH KIL FV                P L+V+   
Sbjct: 68  EVGPFVFREDMEKVNIVFHNNGTVSYQHKKILHFVPEMSENKNIKVIIPNIPLLTVSAMT 127

Query: 49  -NNTRFIL-------------PNIPLL--------------------------------- 61
            N  RFI+             P IP+                                  
Sbjct: 128 KNFPRFIVFGLSMFISGMQMKPFIPITVDELAFGYDDPFVSLGHRFFPKGKRPMSKMGFL 187

Query: 62  --RNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLT 119
             RNGT++EV TIYTG  GM+NFG +++LNGLDHLPYW +APCN+I+ASEGSFFPPRD+T
Sbjct: 188 IGRNGTLNEVHTIYTGEKGMKNFGLLNQLNGLDHLPYWSQAPCNSIRASEGSFFPPRDVT 247

Query: 120 KSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTK- 178
            SD V++YDKDLCRI P++YR  VEK  +K   YTP D +F  G   PENKC+CP     
Sbjct: 248 GSDFVYIYDKDLCRILPMQYRGPVEKSSIKVDLYTPMDTVF--GGLTPENKCFCPDNVAD 305

Query: 179 CPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPL 238
           C  +GLQ++SPCQ++AP+F+SFPHFY+ADP+LL AV+GL P +  H ++ KIQPKLGVPL
Sbjct: 306 CAVQGLQDVSPCQYNAPIFMSFPHFYQADPKLLSAVDGLKPVEHLHRSYAKIQPKLGVPL 365

Query: 239 EAAVRVQLNLAVE-ESNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIA 297
           EA +RVQ NL VE + NI  V  F  I FPIMW EEG+ +L P+I RWI+  TSF   I 
Sbjct: 366 EAKIRVQANLKVERQPNIAAVANFPDIMFPIMWAEEGVEELTPSIRRWIFFGTSFLDIIT 425

Query: 298 PILEYGFIIFGSLVLIVVFVRAYKSLVFTQENLERGREKLRRGSSFIVNGQHRLMIIRDS 357
           P   YGFI+ G   ++ V ++ Y S V   E +E GR  +RRGSSF++ GQHRLM  RDS
Sbjct: 426 PCFTYGFILIGLTTIVTVLIKTYNSPVLAHETIELGRRTIRRGSSFLIAGQHRLMAGRDS 485

Query: 358 YSLLGN 363
           Y LL N
Sbjct: 486 YILLSN 491

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345492480|ref|XP_001601445.2| PREDICTED: scavenger receptor class B member 1-like isoform 1 [Nasonia vitripennis] gi|345492482|ref|XP_003426858.1| PREDICTED: scavenger receptor class B member 1-like isoform 2 [Nasonia vitripennis]

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 212/426 (49%), Positives = 264/426 (61%), Gaps = 72/426 (16%)

Query: 7   ELGPLLSREDMQKVNIEFHDNGTVTFQHYKILEFVPELSVAPNNTRFILPNIPLLRNGTI 66
           E+GP + REDM+KVNI FHDNGTVT+QH KIL FVPELS    + R ++PNIPLL   T 
Sbjct: 140 EVGPFVYREDMEKVNIVFHDNGTVTYQHKKILNFVPELS-KDGDLRVLVPNIPLLTLSTQ 198

Query: 67  SEVQTIYTGHG------GMEN------------FGYMDKLNGLDH--------------- 93
           S+    +   G      GM+             FGY D L  + H               
Sbjct: 199 SKSLPRFLTMGLSMFLSGMDMKPFVPVTAQELVFGYDDPLVSIAHRFFPKTRRPMSQMGL 258

Query: 94  -----------------------------------LPYWDEAPCNAIKASEGSFFPPRDL 118
                                              LPYW +APCN+I+ASEGSFFPPRD 
Sbjct: 259 LLGRNGTLEEVSTIYTGHTDMREFGLINRLNGMDKLPYWSDAPCNSIRASEGSFFPPRDQ 318

Query: 119 TKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFS-PGESQPENKCYCPGQ- 176
           T  D+++VYDKDLCR+ PL+YR   EK G+KA  YTP D +F  P E  P+N+C+CP   
Sbjct: 319 TGEDIINVYDKDLCRVLPLKYRGPTEKTGIKADLYTPTDTVFDPPSEETPDNECFCPDDP 378

Query: 177 TKCPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGV 236
             CPPKGLQNISPCQ+ APV+LSFPHFYKADP+LLDAV GL P  + HET+FKIQPKLGV
Sbjct: 379 DSCPPKGLQNISPCQYSAPVYLSFPHFYKADPKLLDAVSGLKPVPKLHETYFKIQPKLGV 438

Query: 237 PLEAAVRVQLNLAVE-ESNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPN 295
           P+E  VRVQLNL VE + +I  V  F  I FPIMW+EEG+ +L P+I RW+YLAT+FA  
Sbjct: 439 PVEGKVRVQLNLKVEHQPDISAVANFTDIVFPIMWLEEGVDELTPSIRRWVYLATTFADI 498

Query: 296 IAPILEYGFIIFGSLVLIVVFVRAYKSLVFTQENLERGREKLRRGSSFIVNGQHRLMIIR 355
             P++ YG I+ G   L++   +AY ++V T E +E G+  +RRGSSFIVNGQHRL++ +
Sbjct: 499 AVPLITYGLILVGIACLVLASYKAYSNVVLTHEAIELGKRTIRRGSSFIVNGQHRLLMTK 558

Query: 356 DSYSLL 361
           DSY LL
Sbjct: 559 DSYVLL 564

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340723176|ref|XP_003399971.1| PREDICTED: scavenger receptor class B member 1-like [Bombus terrestris]

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 213/430 (49%), Positives = 269/430 (62%), Gaps = 72/430 (16%)

Query: 7   ELGPLLSREDMQKVNIEFHDNGTVTFQHYKILEFVPELSVAPNNTRFILPNIPLLRNGTI 66
           E+GP + +EDM+KVNI FH+NGTV++QH KIL FVPE+S    N + I+PNIPLL   T 
Sbjct: 138 EIGPFVYKEDMEKVNIVFHNNGTVSYQHKKILNFVPEMS-KDKNLKVIVPNIPLLTLSTQ 196

Query: 67  SEV--QTIYTG----HGGMEN------------FGYMDKLNGLDH--------------- 93
           S+   + I  G     GGM+             FGY D L  + H               
Sbjct: 197 SKGLPRIINLGLHMFLGGMQMTPFVPITAQQLVFGYDDPLVSIAHQFFPKARRPMSQMGL 256

Query: 94  -----------------------------------LPYWDEAPCNAIKASEGSFFPPRDL 118
                                              LPYW  +PCN+I+ASEGSFFPPRD 
Sbjct: 257 LLGRNGTLEEVSTIFTGHTDMKEFGLINRLNGLDRLPYWPNSPCNSIRASEGSFFPPRDK 316

Query: 119 TKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFS-PGESQPENKCYCP-GQ 176
           T SD+VH++DKD+CR  PL+YR  V+K G+KA  YTP D +F  P E+ PEN+C+C    
Sbjct: 317 TGSDIVHIWDKDICRTLPLKYRGPVKKSGIKADLYTPPDSVFGRPNETSPENECFCSDDM 376

Query: 177 TKCPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGV 236
           + CP  GLQNISPCQ+ APV+LSFPHFYKADP+LLDAV GL PN++ HET+FKIQPKLGV
Sbjct: 377 STCPFNGLQNISPCQYTAPVYLSFPHFYKADPKLLDAVHGLKPNRDTHETYFKIQPKLGV 436

Query: 237 PLEAAVRVQLNLAVE-ESNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPN 295
           PLE  VRVQLNL VE +  I VV  F  I FPIMWVEEGI +L P+I RW+YLAT+F+  
Sbjct: 437 PLEGKVRVQLNLKVENQPYIGVVSNFPDIVFPIMWVEEGIEELTPSIRRWVYLATTFSDV 496

Query: 296 IAPILEYGFIIFGSLVLIVVFVRAYKSLVFTQENLERGREKLRRGSSFIVNGQHRLMIIR 355
            AP   YG I+ G  ++  VFV+AY +++FT E +E G+  +RRGS+ +VNGQH+L+I R
Sbjct: 497 AAPCTSYGLILVGITIIFAVFVKAYNNVMFTHEAIELGKRTIRRGSTLLVNGQHKLLITR 556

Query: 356 DSYSLLGNHN 365
           + Y LL N N
Sbjct: 557 EQYVLLSNDN 566

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242017472|ref|XP_002429212.1| scavenger receptor class B member, putative [Pediculus humanus corporis] gi|212514101|gb|EEB16474.1| scavenger receptor class B member, putative [Pediculus humanus corporis]

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 189/316 (59%), Positives = 234/316 (74%), Gaps = 9/316 (2%)

Query: 60  LLRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLT 119
           L RNGT+ E+ TI+TGH  ME FG ++++NGLDHLPYW + PCN+IKASEGSFFPPRD T
Sbjct: 201 LGRNGTLREISTIFTGHTSMEEFGLLNRVNGLDHLPYWKKPPCNSIKASEGSFFPPRDFT 260

Query: 120 KSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPG-QTK 178
           KSD+VHVYDKDLCRI PL+YR DV K G+ AG YTP ++     E   +NKCYC    + 
Sbjct: 261 KSDIVHVYDKDLCRILPLKYRGDVSKFGVTAGLYTPSEDALETPEKNEDNKCYCLNVGSY 320

Query: 179 CPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPL 238
           C PKGLQNI+PC F APVFLS+PHF +AD  LLDAVEGL P+ +KH+T+FKIQ KLGVPL
Sbjct: 321 CTPKGLQNINPCHFQAPVFLSYPHFLQADESLLDAVEGLKPDVDKHQTYFKIQHKLGVPL 380

Query: 239 EAAVRVQLNLAVEE-SNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIA 297
           E  VRVQ+NL +   SNI VV  F  I FPIMW+EEGI +L P I RW+YLAT+F+    
Sbjct: 381 EGLVRVQMNLKISRVSNIKVVSKFPDIIFPIMWIEEGIEELSPPIKRWVYLATTFSDVAV 440

Query: 298 PILEYGFIIFGSLVLIVVFVRAYKSLVFTQENLERGREKL-------RRGSSFIVNGQHR 350
           P+  YG I  G  +L+ +FV+AYKS++F    +ERG+E+L       RRGSSF+VNGQ +
Sbjct: 441 PVFTYGCIFLGGSILVFIFVKAYKSILFADPRIERGKERLTKELRDIRRGSSFLVNGQPK 500

Query: 351 LMIIRDSYSLLGNHNA 366
           L+I+RDSY+LL N N 
Sbjct: 501 LLILRDSYTLLNNING 516

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383850289|ref|XP_003700728.1| PREDICTED: scavenger receptor class B member 1-like [Megachile rotundata]

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 188/307 (61%), Positives = 232/307 (75%), Gaps = 3/307 (0%)

Query: 60  LLRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLT 119
           L RNGT++EV TIYTGH  M+ FG +++LNGLDHLPYW  APCN+I+ASEGSFFPPR+ T
Sbjct: 258 LGRNGTLNEVSTIYTGHTDMKEFGLINRLNGLDHLPYWPNAPCNSIRASEGSFFPPREKT 317

Query: 120 KSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFS-PGESQPENKCYCP-GQT 177
            SD+VHV+DKDLCR  PL+YR   EK G+KA  YTP D +F  P E+ PEN+C+C    +
Sbjct: 318 GSDIVHVWDKDLCRTLPLQYRGPSEKSGIKADLYTPPDVVFGRPNETAPENECFCSDDMS 377

Query: 178 KCPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVP 237
            CP  GLQNISPCQ+ APV+LSFPHFYKADP+LLDAV GL PN E HET+FKIQPKLGVP
Sbjct: 378 ACPSNGLQNISPCQYTAPVYLSFPHFYKADPKLLDAVHGLEPNAETHETYFKIQPKLGVP 437

Query: 238 LEAAVRVQLNLAVE-ESNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNI 296
           LE  VRVQLNL VE +  I VV  F  I FPIMW+EEGI +L P+I RW+YLAT+F+   
Sbjct: 438 LEGKVRVQLNLKVERQPLIGVVSNFPDIVFPIMWLEEGIEELTPSIRRWVYLATTFSDVA 497

Query: 297 APILEYGFIIFGSLVLIVVFVRAYKSLVFTQENLERGREKLRRGSSFIVNGQHRLMIIRD 356
            P   YG I+ G +++I VFV+AY + VFT E +E G+  +RR S+ +VNGQH+L++ R+
Sbjct: 498 VPCASYGLILVGMIIIITVFVKAYNNAVFTHEAVELGKRTIRRSSTLLVNGQHKLLMSRE 557

Query: 357 SYSLLGN 363
            Y LL N
Sbjct: 558 LYVLLNN 564

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350418658|ref|XP_003491928.1| PREDICTED: scavenger receptor class B member 1-like [Bombus impatiens]

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 213/430 (49%), Positives = 268/430 (62%), Gaps = 72/430 (16%)

Query: 7   ELGPLLSREDMQKVNIEFHDNGTVTFQHYKILEFVPELSVAPNNTRFILPNIPLLRNGTI 66
           E+GP + +EDM+KVNI FH+NGTV++QH KIL FVPE+S    N + I+PNIPLL   T 
Sbjct: 138 EIGPFVYKEDMEKVNIVFHNNGTVSYQHKKILNFVPEMS-KDKNLKVIVPNIPLLTLSTQ 196

Query: 67  SEV--QTIYTG----HGGMEN------------FGYMDKLNGLDH--------------- 93
           S+   + I  G     GGM              FGY D L  + H               
Sbjct: 197 SKGLPRIINLGLHMFLGGMRMTPFVPVTAEQLVFGYDDPLVSIAHQFFPKTRRPMSQMGL 256

Query: 94  -----------------------------------LPYWDEAPCNAIKASEGSFFPPRDL 118
                                              LPYW  +PC++I+ASEGSFFPPRD 
Sbjct: 257 LLGRNGTLEEVSTIFTGHTDMKEFGLINRLNGLDRLPYWPNSPCDSIRASEGSFFPPRDK 316

Query: 119 TKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFS-PGESQPENKCYCP-GQ 176
           T SD+V+++DKDLCR  PL+YR  V+K G+KA  YTP D +F  P E+ PEN+C+C    
Sbjct: 317 TGSDIVYIWDKDLCRTLPLQYRGPVKKSGIKADLYTPPDSVFGRPNETSPENECFCSDDM 376

Query: 177 TKCPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGV 236
           + CP  GLQNISPCQ+ APV+LSFPHFYKADP+LLDAV GL PN++ HET+FKIQPKLGV
Sbjct: 377 STCPFNGLQNISPCQYTAPVYLSFPHFYKADPKLLDAVHGLKPNRDIHETYFKIQPKLGV 436

Query: 237 PLEAAVRVQLNLAVE-ESNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPN 295
           PLE  VRVQLNL VE +  I VV  F  I FPIMWVEEGI +L P+I RWIYLAT+F+  
Sbjct: 437 PLEGKVRVQLNLKVEHQPYIGVVSNFPDIVFPIMWVEEGIEELTPSIRRWIYLATTFSDV 496

Query: 296 IAPILEYGFIIFGSLVLIVVFVRAYKSLVFTQENLERGREKLRRGSSFIVNGQHRLMIIR 355
            AP   YG I+ G  ++  VFV+AY +++FT E +E G+  +RRGS+ +VNGQH+L+I R
Sbjct: 497 AAPCTSYGLILVGITIVFAVFVKAYNNVMFTHEAIELGKRTIRRGSTLLVNGQHKLLITR 556

Query: 356 DSYSLLGNHN 365
           + Y LL N N
Sbjct: 557 EQYVLLSNDN 566

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380012125|ref|XP_003690138.1| PREDICTED: scavenger receptor class B member 1-like [Apis florea]

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 180/305 (59%), Positives = 228/305 (74%), Gaps = 3/305 (0%)

Query: 60  LLRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLT 119
           L RNGT+ EV TI+TGH  M  FG +++LNG+D LPYW  APCN+I+ASEGSFFPPRD T
Sbjct: 243 LGRNGTLEEVSTIFTGHTDMREFGLINRLNGMDRLPYWSNAPCNSIRASEGSFFPPRDKT 302

Query: 120 KSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFS-PGESQPENKCYCP-GQT 177
            +D+VH++DKDLCR  PL+Y    EK G+KA  Y P D +F  P ES PEN+C+CP   +
Sbjct: 303 GADIVHIWDKDLCRTLPLKYHGSTEKSGIKADLYIPPDAVFGRPNESAPENECFCPDDMS 362

Query: 178 KCPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVP 237
            CP  GLQNISPCQ+ APV+LSFPHFYKADP LLDAV+GL PN+E HET+FKIQPK+GVP
Sbjct: 363 TCPSNGLQNISPCQYSAPVYLSFPHFYKADPNLLDAVQGLNPNREMHETYFKIQPKIGVP 422

Query: 238 LEAAVRVQLNLAVEESN-IHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNI 296
           LE  VRVQLNL +E    I VV  F  I FPIMW+EEGI +L P+I RW+YLAT+F    
Sbjct: 423 LEGKVRVQLNLKIEHQPLISVVSNFPDIVFPIMWLEEGIEELTPSIRRWVYLATTFGDVA 482

Query: 297 APILEYGFIIFGSLVLIVVFVRAYKSLVFTQENLERGREKLRRGSSFIVNGQHRLMIIRD 356
           AP   YG I+ G +++ VVF++AY ++V T E +E G+  +RRGS+ ++NGQH+L++ R+
Sbjct: 483 APCTSYGLILVGLVIIFVVFMKAYNNVVLTHEAIELGKRTIRRGSTLLMNGQHKLLMTRE 542

Query: 357 SYSLL 361
            Y LL
Sbjct: 543 QYVLL 547

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157111859|ref|XP_001664322.1| epithelial membrane protein [Aedes aegypti]

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 189/305 (61%), Positives = 229/305 (75%), Gaps = 8/305 (2%)

Query: 62  RNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKS 121
           RNGT++E  T+YTGH GME FGY DKLNGLDHLP+WD+ PC++I+ASEGSFFPPR++T S
Sbjct: 170 RNGTLTEYATMYTGHTGMEKFGYFDKLNGLDHLPHWDKEPCSSIEASEGSFFPPREVTNS 229

Query: 122 DLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPP 181
           D+V++YDKDLCR  PL YR  VEKDG+ A  YT  ++ + P      N CY     K P 
Sbjct: 230 DVVYIYDKDLCRSLPLVYRHPVEKDGIPADLYTLAEDSYGPPNGN--NSCYEHTDYK-PY 286

Query: 182 KGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAA 241
           +GLQNISPCQ+ APV++S PHFY++DP+LLDAVEGL P ++ HETFFKIQPKLGVPLE  
Sbjct: 287 RGLQNISPCQYGAPVYISNPHFYQSDPQLLDAVEGLNPQRDAHETFFKIQPKLGVPLEGQ 346

Query: 242 VRVQLNLAVEES-NIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPIL 300
           VRVQLNL VEE+ N+   + FR   FPIMW+EEG+ +L P I RWIYLAT FAP   PI+
Sbjct: 347 VRVQLNLLVEEAPNVMATKNFRDFVFPIMWLEEGVSELTPPIRRWIYLATVFAPMALPIV 406

Query: 301 EYGFIIFGSLVLIVVFVRAYKSLVFTQ----ENLERGREKLRRGSSFIVNGQHRLMIIRD 356
            YG I+ G+  LI VFVRAYK+ VFT     E LE GR  LRRGSS I+NGQHR+++ RD
Sbjct: 407 SYGMILTGTFALIYVFVRAYKNFVFTSDPTTEFLEMGRRSLRRGSSMIINGQHRILMQRD 466

Query: 357 SYSLL 361
           SY LL
Sbjct: 467 SYILL 471

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	927
FB|FBgn0035290	615	CG1887 [Drosophila melanogaste	0.322	0.486	0.562	1e-107
FB|FBgn0010435	601	emp "epithelial membrane prote	0.289	0.445	0.403	3.2e-64
MGI|MGI:893578	509	Scarb1 "scavenger receptor cla	0.274	0.499	0.310	7.3e-44
UNIPROTKB|F1PQT1	455	SCARB1 "Uncharacterized protei	0.274	0.558	0.306	1.5e-43
ZFIN|ZDB-GENE-031126-1	496	scarb1 "scavenger receptor cla	0.265	0.495	0.332	1.7e-43
UNIPROTKB|F1NAN9	507	SCARB1 "Uncharacterized protei	0.263	0.481	0.320	4.3e-43
RGD|2302	509	Scarb1 "scavenger receptor cla	0.274	0.499	0.302	8.6e-43
UNIPROTKB|G3V636	506	Scarb1 "Scavenger receptor cla	0.274	0.501	0.302	8.6e-43
UNIPROTKB|A4IFC6	506	SCARB1 "SCARB1 protein" [Bos t	0.274	0.501	0.302	1.7e-42
UNIPROTKB|O18824	509	SCARB1 "Scavenger receptor cla	0.274	0.499	0.302	1.7e-42

FB|FBgn0035290 CG1887 [Drosophila melanogaster (taxid:7227)]

 Score = 912 (326.1 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
 Identities = 172/306 (56%), Positives = 223/306 (72%)

Query:    62 RNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKS 121
             RNGT++EV ++ TG   M+ FGY+D+LNGLDHLP+W E PC +I  SEGSFFPPR+LTKS
Sbjct:   277 RNGTLTEVSSVKTGMDSMDQFGYIDQLNGLDHLPHWSEPPCTSIAGSEGSFFPPRELTKS 336

Query:   122 DLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPP 181
             ++VH+YDKDLCRI PL+Y   +EKDG+ A  +   +  +      PENKCY   + + P 
Sbjct:   337 EVVHIYDKDLCRIIPLKYVESLEKDGIAADLFRLPNNSYGDSAHNPENKCYDTSEYE-PI 395

Query:   182 KGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAA 241
             +GLQNISPCQ+ APV++S PHF+++ P+LL++VEGL P +EKHET+FKIQPKLGVPLE  
Sbjct:   396 QGLQNISPCQYGAPVYISNPHFFESHPDLLNSVEGLKPEREKHETYFKIQPKLGVPLEGK 455

Query:   242 VRVQLNLAVEES-NIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPIL 300
             VR+QLNL V  + +++ VR FR   FP+MW+EEGI +L P I RWIYL T  AP+  PI 
Sbjct:   456 VRIQLNLKVTRAKDVYPVRDFRDFVFPVMWLEEGISELTPAIKRWIYLGTVIAPSAVPIG 515

Query:   301 EYGFIIFGSLVLIVVFVRAYKSLVFTQ----ENLERGREKLRRGSSFIVNGQHRLMII-R 355
              Y  I+ G+  +I  FVRAY++ +F Q    E LE GR  LRRGSSFI + QHRL++  R
Sbjct:   516 SYLMILGGAFAIIFSFVRAYQNFMFAQDPTLEILEMGRRSLRRGSSFIAHQQHRLLVHHR 575

Query:   356 DSYSLL 361
             DSYSLL
Sbjct:   576 DSYSLL 581

GO:0005044 "scavenger receptor activity" evidence=NAS

GO:0006952 "defense response" evidence=NAS

GO:0005887 "integral to plasma membrane" evidence=NAS

GO:0016020 "membrane" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

FB|FBgn0010435 emp "epithelial membrane protein" [Drosophila melanogaster (taxid:7227)]

 Score = 563 (203.2 bits), Expect = 3.2e-64, Sum P(2) = 3.2e-64
 Identities = 111/275 (40%), Positives = 159/275 (57%)

Query:    46 VAPNNTRFILPNIPLL--RNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCN 103
             V P   +       LL  +NGT S+  T+ TG   +  +G +D  NG  HLP+W    CN
Sbjct:   285 VVPKEQKLPYEEFGLLYGKNGTSSDRVTVNTGVDDIRRYGIIDNFNGRTHLPHWTTDACN 344

Query:   104 AIKASEGSFFPPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGY-YTPDDEIFSP 162
              +  ++GS FPP  +    ++HVYDKDLCR+ PL + ++V       GY +TP + +F+ 
Sbjct:   345 TLAGTDGSIFPPH-IDHDRILHVYDKDLCRLLPLVFEKEVMTSNEVPGYRFTPPEWVFAD 403

Query:   163 GESQPENKCYCP-GQTKCPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPN- 220
              +S P+N C+CP G+  C P GL N+S CQ+D+P+ LSFPHFY AD  L   VEG++P  
Sbjct:   404 VDSHPDNMCFCPAGKPSCSPNGLFNVSLCQYDSPIMLSFPHFYLADESLRTQVEGISPPM 463

Query:   221 QEKHETFFKIQPKLGVPLEAAVRVQLNLAVEES-NIHVVRGFRSITFPIMWVEEGIGDLP 279
             +EKH+ FF +QPK+G  L    R+Q+NLAV +  +I  V  F  I FPI+W EEGI +LP
Sbjct:   464 KEKHQFFFDVQPKMGTTLRVRARIQINLAVSQVFDIKQVANFPDIIFPILWFEEGIDNLP 523

Query:   280 PNIHRWIYLATSFAPNIAPILEYGFIIFGSLVLIV 314
               +   +  A    P I   L  G    G ++L++
Sbjct:   524 DEVTDLMRFAEQVPPKIRVALIVGLCALGVILLLL 558

GO:0005887 "integral to plasma membrane" evidence=ISS;NAS

GO:0005044 "scavenger receptor activity" evidence=ISS;NAS

GO:0005886 "plasma membrane" evidence=IDA;NAS

GO:0006952 "defense response" evidence=NAS

GO:0035071 "salivary gland cell autophagic cell death" evidence=IEP

GO:0048102 "autophagic cell death" evidence=IEP

GO:0007155 "cell adhesion" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

MGI|MGI:893578 Scarb1 "scavenger receptor class B, member 1" [Mus musculus (taxid:10090)]

 Score = 383 (139.9 bits), Expect = 7.3e-44, Sum P(2) = 7.3e-44
 Identities = 81/261 (31%), Positives = 126/261 (48%)

Query:    63 NGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSD 122
             N + S V T++TG         +DK NGL  + YW    CN I  + G  + P  +T   
Sbjct:   212 NNSNSGVFTVFTGVQNFSRIHLVDKWNGLSKIDYWHSEQCNMINGTSGQMWAPF-MTPES 270

Query:   123 LVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPK 182
              +  +  + CR   L Y      +G+    +T  D +F+ G   P N+ +CP    C   
Sbjct:   271 SLEFFSPEACRSMKLTYNESRVFEGIPTYRFTAPDTLFANGSVYPPNEGFCP----CRES 326

Query:   183 GLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAV 242
             G+QN+S C+F AP+FLS PHFY ADP L +AV GL PN ++H  F  I P  G+P+  +V
Sbjct:   327 GIQNVSTCRFGAPLFLSHPHFYNADPVLSEAVLGLNPNPKEHSLFLDIHPVTGIPMNCSV 386

Query:   243 RVQLNLAVEE-SNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILE 301
             ++QL+L ++    I        +  P++W E+  G +        Y      P +    +
Sbjct:   387 KMQLSLYIKSVKGIGQTGKIEPVVLPLLWFEQS-GAMGGKPLSTFYTQLVLMPQVLHYAQ 445

Query:   302 YGFIIFGSLVLIVVFVRAYKS 322
             Y  +  G L+L+V  +   +S
Sbjct:   446 YVLLGLGGLLLLVPIICQLRS 466

GO:0001530 "lipopolysaccharide binding" evidence=ISO

GO:0001786 "phosphatidylserine binding" evidence=ISO

GO:0001875 "lipopolysaccharide receptor activity" evidence=ISO

GO:0001935 "endothelial cell proliferation" evidence=IMP

GO:0005737 "cytoplasm" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO;ISS

GO:0005887 "integral to plasma membrane" evidence=IDA

GO:0005901 "caveola" evidence=IDA

GO:0006702 "androgen biosynthetic process" evidence=ISO

GO:0006707 "cholesterol catabolic process" evidence=IMP;IDA

GO:0006869 "lipid transport" evidence=ISO

GO:0006910 "phagocytosis, recognition" evidence=ISO

GO:0007155 "cell adhesion" evidence=IEA

GO:0008035 "high-density lipoprotein particle binding" evidence=IDA

GO:0009986 "cell surface" evidence=ISO

GO:0010867 "positive regulation of triglyceride biosynthetic process" evidence=IMP

GO:0010886 "positive regulation of cholesterol storage" evidence=ISO;ISS

GO:0010899 "regulation of phosphatidylcholine catabolic process" evidence=IMP

GO:0015914 "phospholipid transport" evidence=IMP

GO:0015920 "lipopolysaccharide transport" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IDA

GO:0030169 "low-density lipoprotein particle binding" evidence=ISO;ISS

GO:0030301 "cholesterol transport" evidence=IMP;IDA

GO:0031528 "microvillus membrane" evidence=ISO

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=ISO

GO:0032497 "detection of lipopolysaccharide" evidence=ISO

GO:0033344 "cholesterol efflux" evidence=IDA

GO:0034185 "apolipoprotein binding" evidence=ISO;IPI

GO:0034186 "apolipoprotein A-I binding" evidence=ISO

GO:0034375 "high-density lipoprotein particle remodeling" evidence=IMP

GO:0034383 "low-density lipoprotein particle clearance" evidence=IMP

GO:0034384 "high-density lipoprotein particle clearance" evidence=ISO;ISS

GO:0042632 "cholesterol homeostasis" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=ISO

GO:0043534 "blood vessel endothelial cell migration" evidence=IMP

GO:0043654 "recognition of apoptotic cell" evidence=ISO;ISS

GO:0043691 "reverse cholesterol transport" evidence=IMP

GO:0050764 "regulation of phagocytosis" evidence=ISO

GO:0051000 "positive regulation of nitric-oxide synthase activity" evidence=ISO

GO:0051856 "adhesion to symbiont" evidence=ISO

GO:0070328 "triglyceride homeostasis" evidence=IMP

GO:0070506 "high-density lipoprotein particle receptor activity" evidence=ISO;ISS

GO:0070508 "cholesterol import" evidence=IDA;IMP

UNIPROTKB|F1PQT1 SCARB1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 389 (142.0 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
 Identities = 80/261 (30%), Positives = 129/261 (49%)

Query:    63 NGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSD 122
             N + S + T++TG         +DK NGL  + +W    CN I  + G  + P  +T   
Sbjct:   158 NNSDSGIFTVFTGVKDFSRIHLVDKWNGLSKVNFWHSDQCNMINGTSGQMWAPF-MTPET 216

Query:   123 LVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPK 182
              +  Y  + CR   L Y+      G+    +     +F+ G   P N+ +CP    C   
Sbjct:   217 SLEFYSPEACRSMKLIYKESGTFQGIPTYRFVAPSTLFANGSVYPPNEGFCP----CLES 272

Query:   183 GLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAV 242
             G+QN+S C+F+AP+FLS PHFY ADP L +AV GL PNQE+H  F  I P  G+P+  +V
Sbjct:   273 GIQNVSTCRFNAPLFLSHPHFYNADPMLAEAVLGLHPNQEEHSLFLDIHPVTGIPMNCSV 332

Query:   243 RVQLNLAVEE-SNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILE 301
             ++QL+L ++    I      + +  P++W EE  G +     +  Y      PN+    +
Sbjct:   333 KLQLSLYIKAIKGIGQTGKIQPVVLPLVWFEES-GAMEGKPLKTFYTQLVLMPNVLHYAQ 391

Query:   302 YGFIIFGSLVLIVVFVRAYKS 322
             Y  +  G ++L++  +   +S
Sbjct:   392 YVLLALGCILLLIPIIHQLRS 412

GO:0070508 "cholesterol import" evidence=IEA

GO:0070506 "high-density lipoprotein particle receptor activity" evidence=IEA

GO:0070328 "triglyceride homeostasis" evidence=IEA

GO:0051856 "adhesion to symbiont" evidence=IEA

GO:0051000 "positive regulation of nitric-oxide synthase activity" evidence=IEA

GO:0043691 "reverse cholesterol transport" evidence=IEA

GO:0043654 "recognition of apoptotic cell" evidence=IEA

GO:0043534 "blood vessel endothelial cell migration" evidence=IEA

GO:0042632 "cholesterol homeostasis" evidence=IEA

GO:0034384 "high-density lipoprotein particle clearance" evidence=IEA

GO:0034383 "low-density lipoprotein particle clearance" evidence=IEA

GO:0034375 "high-density lipoprotein particle remodeling" evidence=IEA

GO:0034186 "apolipoprotein A-I binding" evidence=IEA

GO:0033344 "cholesterol efflux" evidence=IEA

GO:0032497 "detection of lipopolysaccharide" evidence=IEA

GO:0030169 "low-density lipoprotein particle binding" evidence=IEA

GO:0015920 "lipopolysaccharide transport" evidence=IEA

GO:0015914 "phospholipid transport" evidence=IEA

GO:0010899 "regulation of phosphatidylcholine catabolic process" evidence=IEA

GO:0010886 "positive regulation of cholesterol storage" evidence=IEA

GO:0010867 "positive regulation of triglyceride biosynthetic process" evidence=IEA

GO:0008035 "high-density lipoprotein particle binding" evidence=IEA

GO:0006707 "cholesterol catabolic process" evidence=IEA

GO:0005901 "caveola" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0001935 "endothelial cell proliferation" evidence=IEA

GO:0001875 "lipopolysaccharide receptor activity" evidence=IEA

GO:0001530 "lipopolysaccharide binding" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

ZFIN|ZDB-GENE-031126-1 scarb1 "scavenger receptor class B, member 1" [Danio rerio (taxid:7955)]

 Score = 399 (145.5 bits), Expect = 1.7e-43, Sum P(2) = 1.7e-43
 Identities = 86/259 (33%), Positives = 134/259 (51%)

Query:    63 NGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSD 122
             N + + + TI+TG   +     +D  NGL ++ YW    CN I  + G  +PP  +TK  
Sbjct:   210 NNSNTGLFTIFTGRDDIRKVHMVDSWNGLKNVDYWRSDQCNMINGTAGQMWPPF-MTKET 268

Query:   123 LVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPK 182
              +  Y  D CR   L Y+R +   G+    Y     +F+ G   P N+ +CP    C   
Sbjct:   269 TMPFYSPDACRSMELVYQRPLVSSGIPVYRYVSPKTLFANGADFPPNEGFCP----CRQS 324

Query:   183 GLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAV 242
             GL N+S C+  +P F+S PHFY ADP+LLD V GL+P++++H  F  I P+ GVP+  +V
Sbjct:   325 GLLNVSSCRHGSPTFISQPHFYNADPQLLDTVSGLSPSEDEHGLFIDIHPETGVPVNVSV 384

Query:   243 RVQLNLAVEE-SNIHVVRGFRSITFPIMWVEE-GIGDLPPNIHRWIYLATSFA--PNIAP 298
             R+QLNL +++ S I        +  P++W EE G  D  P +H +    T+    P +  
Sbjct:   385 RLQLNLFLKKVSGISETGNIAEVVMPMLWFEESGYID-GPVLHTF---RTNLVVLPKVME 440

Query:   299 ILEYGFIIFGSLVLIVVFV 317
              ++Y FI  G   ++   +
Sbjct:   441 YMQYIFIALGLAAILTAVI 459

GO:0007155 "cell adhesion" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1NAN9 SCARB1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 373 (136.4 bits), Expect = 4.3e-43, Sum P(2) = 4.3e-43
 Identities = 81/253 (32%), Positives = 131/253 (51%)

Query:    63 NGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSD 122
             N T S + T+ TG   +     +D  NGL  + YW    CN I  + G  +PP  ++ + 
Sbjct:   214 NNTNSGLFTVNTGMKNISQVHMVDSWNGLKKVNYWRTNECNMINGTAGEMWPPY-MSPTS 272

Query:   123 LVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPK 182
             L   Y  D CR   L Y +  +  G+    +     +F+ G   P N+ +CP    C   
Sbjct:   273 L-EFYSPDACRSMTLVYEQSGKFKGVPTYRFVAPKTLFANGTDYPPNEGFCP----CRQS 327

Query:   183 GLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAV 242
             G+QN+S C+ +AP+F+S PHFY ADP L+DAVEGL P++E+H  F  + P  G+P+  ++
Sbjct:   328 GIQNVSSCRLNAPMFISHPHFYNADPSLVDAVEGLHPSREEHALFLDVHPVTGIPMNCSI 387

Query:   243 RVQLNLAVEE-SNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILE 301
             ++QLN  +++ S I      + +  P++W  E  G +  ++    Y      P+I   L+
Sbjct:   388 KLQLNQYMKQVSGILQTGKIQPVVMPLLWFAES-GYIDGSVLSQFYTNLVLIPSILDYLQ 446

Query:   302 YGFIIFGSLVLIV 314
             Y F+   S+ LI+
Sbjct:   447 YIFLGL-SVPLII 458

GO:0007155 "cell adhesion" evidence=IEA

GO:0001530 "lipopolysaccharide binding" evidence=IEA

GO:0001875 "lipopolysaccharide receptor activity" evidence=IEA

GO:0001935 "endothelial cell proliferation" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0005901 "caveola" evidence=IEA

GO:0006707 "cholesterol catabolic process" evidence=IEA

GO:0008035 "high-density lipoprotein particle binding" evidence=IEA

GO:0010867 "positive regulation of triglyceride biosynthetic process" evidence=IEA

GO:0010886 "positive regulation of cholesterol storage" evidence=IEA

GO:0010899 "regulation of phosphatidylcholine catabolic process" evidence=IEA

GO:0015914 "phospholipid transport" evidence=IEA

GO:0015920 "lipopolysaccharide transport" evidence=IEA

GO:0030169 "low-density lipoprotein particle binding" evidence=IEA

GO:0032497 "detection of lipopolysaccharide" evidence=IEA

GO:0033344 "cholesterol efflux" evidence=IEA

GO:0034186 "apolipoprotein A-I binding" evidence=IEA

GO:0034375 "high-density lipoprotein particle remodeling" evidence=IEA

GO:0034383 "low-density lipoprotein particle clearance" evidence=IEA

GO:0034384 "high-density lipoprotein particle clearance" evidence=IEA

GO:0042632 "cholesterol homeostasis" evidence=IEA

GO:0043534 "blood vessel endothelial cell migration" evidence=IEA

GO:0043654 "recognition of apoptotic cell" evidence=IEA

GO:0043691 "reverse cholesterol transport" evidence=IEA

GO:0051000 "positive regulation of nitric-oxide synthase activity" evidence=IEA

GO:0051856 "adhesion to symbiont" evidence=IEA

GO:0070328 "triglyceride homeostasis" evidence=IEA

GO:0070506 "high-density lipoprotein particle receptor activity" evidence=IEA

GO:0070508 "cholesterol import" evidence=IEA

RGD|2302 Scarb1 "scavenger receptor class B, member 1" [Rattus norvegicus (taxid:10116)]

 Score = 377 (137.8 bits), Expect = 8.6e-43, Sum P(2) = 8.6e-43
 Identities = 79/261 (30%), Positives = 127/261 (48%)

Query:    63 NGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSD 122
             N + S V T++TG         +DK NGL  + YW    CN I  + G  + P  +T   
Sbjct:   212 NDSSSGVFTVFTGVQNFSKIHLVDKWNGLSEVNYWHSEQCNMINGTAGQMWAPF-MTPES 270

Query:   123 LVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPK 182
              +  +  + CR   L Y+     +G+    +T  D +F+ G   P N+ +CP    C   
Sbjct:   271 SLEFFSPEACRSMKLTYQESRVFEGIPTYRFTAPDTLFANGSVYPPNEGFCP----CRES 326

Query:   183 GLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAV 242
             G+QN+S C+F AP+FLS PHFY ADP L +AV GL P+ ++H  F  I P  G+P+  +V
Sbjct:   327 GIQNVSTCRFGAPLFLSQPHFYNADPVLSEAVLGLNPDPKEHSLFLDIHPVTGIPMNCSV 386

Query:   243 RVQLNLAVEE-SNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILE 301
             ++QL+L ++    +        +  P++W E+  G +        Y      P +    +
Sbjct:   387 KMQLSLYIKSVKGVGQTGKIEPVVLPLLWFEQS-GMMGGKTLNTFYTQLVLMPQVLHYAQ 445

Query:   302 YGFIIFGSLVLIVVFVRAYKS 322
             Y  +  G L+L+V  +   +S
Sbjct:   446 YVLLGLGGLLLLVPIIYQLRS 466

GO:0001530 "lipopolysaccharide binding" evidence=IEA;ISO

GO:0001786 "phosphatidylserine binding" evidence=IDA;TAS

GO:0001875 "lipopolysaccharide receptor activity" evidence=IEA;ISO

GO:0001935 "endothelial cell proliferation" evidence=IEA;ISO

GO:0005319 "lipid transporter activity" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISO;ISS

GO:0005887 "integral to plasma membrane" evidence=IEA;ISO

GO:0005901 "caveola" evidence=IEA;ISO

GO:0006694 "steroid biosynthetic process" evidence=TAS

GO:0006702 "androgen biosynthetic process" evidence=IDA

GO:0006707 "cholesterol catabolic process" evidence=IEA;ISO

GO:0006869 "lipid transport" evidence=IMP

GO:0006910 "phagocytosis, recognition" evidence=IMP

GO:0007155 "cell adhesion" evidence=IEA

GO:0008035 "high-density lipoprotein particle binding" evidence=IEA;ISO

GO:0009986 "cell surface" evidence=IDA

GO:0010867 "positive regulation of triglyceride biosynthetic process" evidence=IEA;ISO

GO:0010886 "positive regulation of cholesterol storage" evidence=ISO;ISS

GO:0010899 "regulation of phosphatidylcholine catabolic process" evidence=IEA;ISO

GO:0015914 "phospholipid transport" evidence=IEA;ISO

GO:0015920 "lipopolysaccharide transport" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=ISO

GO:0030169 "low-density lipoprotein particle binding" evidence=ISO;ISS

GO:0030301 "cholesterol transport" evidence=ISO

GO:0031528 "microvillus membrane" evidence=IDA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=ISO

GO:0032497 "detection of lipopolysaccharide" evidence=IEA;ISO

GO:0033344 "cholesterol efflux" evidence=IEA;ISO

GO:0034185 "apolipoprotein binding" evidence=ISO

GO:0034186 "apolipoprotein A-I binding" evidence=IEA;ISO

GO:0034375 "high-density lipoprotein particle remodeling" evidence=IEA;ISO

GO:0034383 "low-density lipoprotein particle clearance" evidence=IEA;ISO

GO:0034384 "high-density lipoprotein particle clearance" evidence=ISO;ISS

GO:0042632 "cholesterol homeostasis" evidence=IEA;ISO

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0043534 "blood vessel endothelial cell migration" evidence=IEA;ISO

GO:0043654 "recognition of apoptotic cell" evidence=ISO;ISS;IDA

GO:0043691 "reverse cholesterol transport" evidence=ISO;ISS

GO:0050764 "regulation of phagocytosis" evidence=IDA;TAS

GO:0051000 "positive regulation of nitric-oxide synthase activity" evidence=IEA;ISO

GO:0051856 "adhesion to symbiont" evidence=IEA;ISO

GO:0070328 "triglyceride homeostasis" evidence=IEA;ISO

GO:0070506 "high-density lipoprotein particle receptor activity" evidence=ISO;ISS

GO:0070508 "cholesterol import" evidence=IEA;ISO

UNIPROTKB|G3V636 Scarb1 "Scavenger receptor class B member 1" [Rattus norvegicus (taxid:10116)]

 Score = 377 (137.8 bits), Expect = 8.6e-43, Sum P(2) = 8.6e-43
 Identities = 79/261 (30%), Positives = 127/261 (48%)

Query:    63 NGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSD 122
             N + S V T++TG         +DK NGL  + YW    CN I  + G  + P  +T   
Sbjct:   212 NDSSSGVFTVFTGVQNFSKIHLVDKWNGLSEVNYWHSEQCNMINGTAGQMWAPF-MTPES 270

Query:   123 LVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPK 182
              +  +  + CR   L Y+     +G+    +T  D +F+ G   P N+ +CP    C   
Sbjct:   271 SLEFFSPEACRSMKLTYQESRVFEGIPTYRFTAPDTLFANGSVYPPNEGFCP----CRES 326

Query:   183 GLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAV 242
             G+QN+S C+F AP+FLS PHFY ADP L +AV GL P+ ++H  F  I P  G+P+  +V
Sbjct:   327 GIQNVSTCRFGAPLFLSQPHFYNADPVLSEAVLGLNPDPKEHSLFLDIHPVTGIPMNCSV 386

Query:   243 RVQLNLAVEE-SNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILE 301
             ++QL+L ++    +        +  P++W E+  G +        Y      P +    +
Sbjct:   387 KMQLSLYIKSVKGVGQTGKIEPVVLPLLWFEQS-GMMGGKTLNTFYTQLVLMPQVLHYAQ 445

Query:   302 YGFIIFGSLVLIVVFVRAYKS 322
             Y  +  G L+L+V  +   +S
Sbjct:   446 YVLLGLGGLLLLVPIIYQLRS 466

GO:0007155 "cell adhesion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|A4IFC6 SCARB1 "SCARB1 protein" [Bos taurus (taxid:9913)]

 Score = 384 (140.2 bits), Expect = 1.7e-42, Sum P(2) = 1.7e-42
 Identities = 79/261 (30%), Positives = 127/261 (48%)

Query:    63 NGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSD 122
             N + S + T++TG         +DK NG+  + YW    CN I  + G  + P  +T   
Sbjct:   212 NNSDSGLFTVFTGVKNFSRIHLVDKWNGVSKVNYWHSDQCNMINGTSGQMWAPF-MTPES 270

Query:   123 LVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPK 182
              +  Y  + CR   L Y+      G+    +     +F+ G   P N+ +CP    C   
Sbjct:   271 SLEFYSPEACRSMKLVYKEQGVFGGIPTFRFVAPSTLFANGSVYPPNEGFCP----CRES 326

Query:   183 GLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAV 242
             G+QN+S C+F+AP+FLS PHFY ADP L +AV GL PN ++H  F  I P  G+P+  +V
Sbjct:   327 GIQNVSTCRFNAPLFLSHPHFYNADPVLAEAVSGLHPNPKEHSLFLDIHPVTGIPMNCSV 386

Query:   243 RVQLNLAVEE-SNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILE 301
             ++QL+L V+    I      + +  P+MW EE  G +        Y+     P +    +
Sbjct:   387 KLQLSLFVKSVKGIGQTGNIQPVVLPLMWFEES-GAMEGETLETFYIQLVLMPKVLHYAQ 445

Query:   302 YGFIIFGSLVLIVVFVRAYKS 322
             Y  +  G ++L++  +   +S
Sbjct:   446 YVLLALGCVLLLIPIIYQIRS 466

GO:0016021 "integral to membrane" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

UNIPROTKB|O18824 SCARB1 "Scavenger receptor class B member 1" [Bos taurus (taxid:9913)]

 Score = 384 (140.2 bits), Expect = 1.7e-42, Sum P(2) = 1.7e-42
 Identities = 79/261 (30%), Positives = 127/261 (48%)

Query:    63 NGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSD 122
             N + S + T++TG         +DK NG+  + YW    CN I  + G  + P  +T   
Sbjct:   212 NNSDSGLFTVFTGVKNFSRIHLVDKWNGVSKVNYWHSDQCNMINGTSGQMWAPF-MTPES 270

Query:   123 LVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTKCPPK 182
              +  Y  + CR   L Y+      G+    +     +F+ G   P N+ +CP    C   
Sbjct:   271 SLEFYSPEACRSMKLVYKEQGVFGGIPTFRFVAPSTLFANGSVYPPNEGFCP----CRES 326

Query:   183 GLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAV 242
             G+QN+S C+F+AP+FLS PHFY ADP L +AV GL PN ++H  F  I P  G+P+  +V
Sbjct:   327 GIQNVSTCRFNAPLFLSHPHFYNADPVLAEAVSGLHPNPKEHSLFLDIHPVTGIPMNCSV 386

Query:   243 RVQLNLAVEE-SNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILE 301
             ++QL+L V+    I      + +  P+MW EE  G +        Y+     P +    +
Sbjct:   387 KLQLSLFVKSVKGIGQTGNIQPVVLPLMWFEES-GAMEGETLETFYIQLVLMPKVLHYAQ 445

Query:   302 YGFIIFGSLVLIVVFVRAYKS 322
             Y  +  G ++L++  +   +S
Sbjct:   446 YVLLALGCVLLLIPIIYQIRS 466

GO:0005901 "caveola" evidence=IEA

GO:0070508 "cholesterol import" evidence=IEA

GO:0070506 "high-density lipoprotein particle receptor activity" evidence=IEA

GO:0070328 "triglyceride homeostasis" evidence=IEA

GO:0051856 "adhesion to symbiont" evidence=IEA

GO:0051000 "positive regulation of nitric-oxide synthase activity" evidence=IEA

GO:0043691 "reverse cholesterol transport" evidence=IEA

GO:0043654 "recognition of apoptotic cell" evidence=IEA

GO:0043534 "blood vessel endothelial cell migration" evidence=IEA

GO:0042632 "cholesterol homeostasis" evidence=IEA

GO:0034384 "high-density lipoprotein particle clearance" evidence=IEA

GO:0034383 "low-density lipoprotein particle clearance" evidence=IEA

GO:0034375 "high-density lipoprotein particle remodeling" evidence=IEA

GO:0034186 "apolipoprotein A-I binding" evidence=IEA

GO:0033344 "cholesterol efflux" evidence=IEA

GO:0032497 "detection of lipopolysaccharide" evidence=IEA

GO:0030169 "low-density lipoprotein particle binding" evidence=IEA

GO:0015920 "lipopolysaccharide transport" evidence=IEA

GO:0015914 "phospholipid transport" evidence=IEA

GO:0010899 "regulation of phosphatidylcholine catabolic process" evidence=IEA

GO:0010886 "positive regulation of cholesterol storage" evidence=IEA

GO:0010867 "positive regulation of triglyceride biosynthetic process" evidence=IEA

GO:0008035 "high-density lipoprotein particle binding" evidence=IEA

GO:0006707 "cholesterol catabolic process" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0001935 "endothelial cell proliferation" evidence=IEA

GO:0001875 "lipopolysaccharide receptor activity" evidence=IEA

GO:0001530 "lipopolysaccharide binding" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	927
pfam01130	460	pfam01130, CD36, CD36 family	1e-85
pfam01130	460	pfam01130, CD36, CD36 family	2e-52
pfam01130	460	pfam01130, CD36, CD36 family	8e-29

>gnl|CDD|216316 pfam01130, CD36, CD36 family

 Score =  281 bits (722), Expect = 1e-85
 Identities = 123/386 (31%), Positives = 183/386 (47%), Gaps = 73/386 (18%)

Query: 7   ELGPLLSREDMQKVNIEFHDNG-TVTFQHYKILEFVPELSVAPN-NTRFILPNIPLL--- 61
           E+GP + RE  +KVN+ F+DNG TV+++  +   F PELSV    +    +PNIP+L   
Sbjct: 77  EVGPYVYREYREKVNVTFNDNGTTVSYKQRRTYVFDPELSVGGPEDDVITVPNIPMLGAA 136

Query: 62  --------------------------RNGTISEV-------------QTIYTGHGGMENF 82
                                        T+ E+             +  +      + F
Sbjct: 137 ATAKSMSPLLRLLINAALKSLGEKPFVTRTVGELLFGYEDPLLSLAKKPPFNPDLPFDKF 196

Query: 83  GYMDKLNGLD--------------------------HLPYWDEAPCNAIKASEGSFFPPR 116
           G     NG                            HL +W    CN I  ++GS FPP 
Sbjct: 197 GLFYGRNGTYDGVFTVNTGVDDISKLGQIDSWNGETHLGWWPTDECNMINGTDGSLFPP- 255

Query: 117 DLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQ 176
            LTK D ++V+  DLCR  PL Y+  V  +G+    Y    ++F  G + PEN+C+C   
Sbjct: 256 FLTKKDTLYVFSPDLCRSIPLVYQETVTYNGIPGYRYVGPPDVFDNGTNNPENECFCVKN 315

Query: 177 TKCPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGV 236
             C P GL ++S C + AP+FLSFPHFY ADP LL+AVEGL PN+EKHETF  I+P  G 
Sbjct: 316 QDCLPSGLLDVSKCYYGAPIFLSFPHFYGADPSLLEAVEGLNPNKEKHETFIDIEPTTGT 375

Query: 237 PLEAAVRVQLNLAVEE-SNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPN 295
           PL+AA R+Q+N+ VE+   I +++ F ++  P+ W EEG   L   +   +       P 
Sbjct: 376 PLQAAKRLQINILVEKVKGISILKNFPNVILPLFWFEEGA-VLDDELASLLKKQLVILPR 434

Query: 296 IAPILEYGFIIFGSLVLIVVFVRAYK 321
           I   L +  +  G ++L++  +  ++
Sbjct: 435 IQSYLGWVLLALGLILLLIAIILYFR 460

The CD36 family is thought to be a novel class of scavenger receptors. There is also evidence suggesting a possible role in signal transduction. CD36 is involved in cell adhesion. Length = 460

>gnl|CDD|216316 pfam01130, CD36, CD36 family

 Score =  190 bits (484), Expect = 2e-52
 Identities = 77/199 (38%), Positives = 109/199 (54%), Gaps = 1/199 (0%)

Query: 446 TLTSQANALKPLMKTGVSLALRMTSMKPFVSITAEELVFGYDDTLTSLANRFFPKGKRPP 505
              + A ++ PL++  ++ AL+    KPFV+ T  EL+FGY+D L SLA +       P 
Sbjct: 134 GAAATAKSMSPLLRLLINAALKSLGEKPFVTRTVGELLFGYEDPLLSLAKKPPFNPDLPF 193

Query: 506 RKMGLFLGRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFF 565
            K GLF GRNGT   V T+ TG   +   G +D  NG  HL +W    CN I  ++GS F
Sbjct: 194 DKFGLFYGRNGTYDGVFTVNTGVDDISKLGQIDSWNGETHLGWWPTDECNMINGTDGSLF 253

Query: 566 PPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYC 625
           PP  LTK D ++V+  DLCR  PL Y+  V  +G+    Y    ++F  G + PEN+C+C
Sbjct: 254 PP-FLTKKDTLYVFSPDLCRSIPLVYQETVTYNGIPGYRYVGPPDVFDNGTNNPENECFC 312

Query: 626 PGQTKCPPKGLQNISPCQF 644
                C P GL ++S C +
Sbjct: 313 VKNQDCLPSGLLDVSKCYY 331

The CD36 family is thought to be a novel class of scavenger receptors. There is also evidence suggesting a possible role in signal transduction. CD36 is involved in cell adhesion. Length = 460

>gnl|CDD|216316 pfam01130, CD36, CD36 family

 Score =  120 bits (304), Expect = 8e-29
 Identities = 46/85 (54%), Positives = 61/85 (71%), Gaps = 1/85 (1%)

Query: 365 NAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRVQLNLAVEE 424
            AP+FLSFPHFY ADP LL+AVEGL PN+EKHETF  I+P  G PL+AA R+Q+N+ VE+
Sbjct: 332 GAPIFLSFPHFYGADPSLLEAVEGLNPNKEKHETFIDIEPTTGTPLQAAKRLQINILVEK 391

Query: 425 -SNIHVVRGFRSITFPIMWVEETLT 448
              I +++ F ++  P+ W EE   
Sbjct: 392 VKGISILKNFPNVILPLFWFEEGAV 416

The CD36 family is thought to be a novel class of scavenger receptors. There is also evidence suggesting a possible role in signal transduction. CD36 is involved in cell adhesion. Length = 460

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	927
PF01130	467	CD36: CD36 family; InterPro: IPR002159 CD36 is a t	100.0
KOG3776|consensus	507		100.0
PF01130	467	CD36: CD36 family; InterPro: IPR002159 CD36 is a t	100.0
KOG3776|consensus	507		100.0
PF11271	301	DUF3068: Protein of unknown function (DUF3068); In	97.18

>PF01130 CD36: CD36 family; InterPro: IPR002159 CD36 is a transmembrane, highly glycosylated, 88kDa glycoprotein expressed by monocytes, macrophages, platelets, microvascular endothelial cells and adipose tissues

Probab=100.00  E-value=5.1e-77  Score=690.00  Aligned_cols=317  Identities=43%  Similarity=0.830  Sum_probs=305.8

Q ss_pred             CCCcEEecceEEEEEeeeeceEEccCC-eEEEEeeeeEEEccCCCCC-CCCCeEEcCCccee------------------
Q psy11460          2 QKVNIELGPLLSREDMQKVNIEFHDNG-TVTFQHYKILEFVPELSVA-PNNTRFILPNIPLL------------------   61 (927)
Q Consensus         2 ~~~~~EiGPYvYrE~~~K~ni~f~~n~-TVsY~~~~~~~F~pe~S~~-~~~d~I~~pNip~l------------------   61 (927)
                      +|+|+|+|||+|+|+++|+||+||+|+ ||+|+++|+|+|+||+|++ +++|.||+||+|++                  
T Consensus        72 kP~~~EvGPY~y~e~~~k~nv~~~~~~~tvsY~~~~~~~F~~~~S~~~~~~d~it~~N~~~l~~~~~~~~~~~~~~~~~~  151 (467)
T PF01130_consen   72 KPNVQEVGPYVYREYREKVNVTFNDNGSTVSYRQKRTFFFDPELSCGCSEDDTITTPNIPLLGAASLVRNMSPFVKSLIN  151 (467)
T ss_pred             CceEEEeCCEEEEeeeeeeeeEEcCCCcEEEEEeeeeEEeccccCCCCCccceEEeccHHHhhhhhhhccccHHHHHHHH
Confidence            689999999999999999999999988 9999999999999999997 89999999999886                  


Q ss_pred             ------------------------------------------------------ccccccccEEEEcCCCCcccccceEe
Q psy11460         62 ------------------------------------------------------RNGTISEVQTIYTGHGGMENFGYMDK   87 (927)
Q Consensus        62 ------------------------------------------------------~NgT~dg~~tI~TG~~di~~~G~I~~   87 (927)
                                                                            +|+|.+|.|+|+||++|++++|+|.+
T Consensus       152 ~~l~~~~~~~fv~~tv~e~Lf~GY~dpll~~~~~~~~~~~~~~~~~~~fg~~~~~N~t~~~~~~v~TG~~d~~~~g~i~~  231 (467)
T PF01130_consen  152 LLLNSLGEKLFVTRTVRELLFDGYEDPLLSLAKKLLDFLRPDLIPFDKFGLFYGRNGTYDGVYTVNTGKDDISKVGQIDS  231 (467)
T ss_pred             HhhhccCCcceEeccHHHhhhccCchHHHHHHhhhhhhcCCccCCCCccccccccCCCCceeEEEECCCCChhhhceeeE
Confidence                                                                  58899999999999999999999999


Q ss_pred             eCCccCCCCcCCCCCCceeCCCCCCCCCCCCCCCceEEEEeccceeEEEEEEeeeeeeCCeeEEEEecCCCCCCCCCCCC
Q psy11460         88 LNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQP  167 (927)
Q Consensus        88 wnG~~~l~~W~~~~Cn~InGTDG~~fpP~~l~~~d~L~iF~~DlCRsl~l~y~~~~~~~GI~~~RY~~~~~~fd~~~~np  167 (927)
                      |||++++++|.+++||+|+||||++|||+ ++++++|++|++|+||+++++|+++++++||+++||++++++|++++.+|
T Consensus       232 ~ng~~~l~~w~~~~cn~i~GtdG~~fpP~-l~~~~~l~~f~~dlCRs~~l~y~~~~~~~Gi~~~rf~~~~~~f~~~~~~~  310 (467)
T PF01130_consen  232 WNGSTSLTYWNGEECNMINGTDGSFFPPF-LTKDDTLYVFSSDLCRSLPLEYEEEVTVKGIPAYRFVLPPNVFDNGSNNP  310 (467)
T ss_pred             ECCcccCCCcCCccccceeCCccCccCCC-CCCCceEEEEehhcceeEEEEEecceecCCeEEEEEEEChhHhcCcCcCc
Confidence            99999999999999999999999999996 89999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCC---CCCCCceeeCCCCCCCCceeecccccccCChhhhhcccccCCCcccCcceEeeeccCCccceeeeEe
Q psy11460        168 ENKCYCPGQT---KCPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRV  244 (927)
Q Consensus       168 ~n~CfC~~~~---~C~p~GlldlS~C~~GaPi~~S~PHFy~aDp~l~~~V~GL~Pd~ekH~t~idiEP~TGvpL~a~~Rl  244 (927)
                      +|+|||.+..   .|+|+|++|+|+|++|+|+++|+||||+|||+++++|+||+||+|+|++|+++||+||+||++++|+
T Consensus       311 ~n~c~C~~~~~~~~c~p~G~~~ls~C~~g~Pi~~S~PHF~~adp~~~~~v~Gl~Pd~~~H~~~~~iEP~tG~~l~~~~rl  390 (467)
T PF01130_consen  311 ENKCFCPKNSDECNCLPSGLLNLSPCQFGAPIFVSFPHFYNADPSLLEAVEGLNPDPEKHETYIDIEPTTGIPLQAAKRL  390 (467)
T ss_pred             cccccCCCCCcccccCCcceEechhhcCCCCccccCcccccCChhhhhcCCCCCCCcccceeEEEeecccCeeeeeeEee
Confidence            9999998753   3999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEecC-CccccccCCcceEEeeEEEeeccCCCChhHHHHHHHHhhcccchHhHHHHHHHHHHHHHHHHHHHHhh
Q psy11460        245 QLNLAVEE-SNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILEYGFIIFGSLVLIVVFVRAY  320 (927)
Q Consensus       245 QiNl~v~~-~~i~~~~~~~~~ilPlfW~ee~~~~l~~~i~~~l~~~~~i~p~i~~~l~~~li~lGlilliv~~~~~y  320 (927)
                      |+|+.|++ +.+..+++++++++|+||+++++ ++++++++.++..+..++.++.++.|+++++|+++++++++.++
T Consensus       391 Q~N~~v~~~~~~~~~~~~~~~~~Pl~W~~~~~-~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~l~~~i~~~~  466 (467)
T PF01130_consen  391 QINLLVRPTDGISIYKNLPNVIFPLFWFEEGA-ELPDELADMLKKQLFILPKIQFILQIILIALGIILLLLSIVLFI  466 (467)
T ss_pred             eeeEEecCccccccccCCCcEEEeeEEeeeee-ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhee
Confidence            99999999 99999999999999999999998 79999999998889999999999999999999999999887654

Platelet glycoprotein IV (GP IV)(GPIIIb) (CD36 antigen) is also called GPIV, OKM5-antigen or PASIV. CD36 recognises oxidized low density lipoprotein, long chain fatty acids, anionic phospholipids, collagen types I, IV and V, thrombospondin (TSP) and Plasmodium falciparum infected erythrocytes. The recognition of apoptotic neutrophils is in co-operation with TSP and avb3. Other ligands may still be unknown. CD36 is a scavenger receptor for oxidized LDL and shed photoreceptor outer segments and in recognition and phagocytosis of apoptotic cells and is the cell adhesion molecule in platelet adhesion and aggregation, platelet-monocyte and platelet-tumor cell interaction []. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0007155 cell adhesion, 0016020 membrane

>KOG3776|consensus

Probab=100.00  E-value=4.5e-76  Score=676.15  Aligned_cols=321  Identities=43%  Similarity=0.789  Sum_probs=306.1

Q ss_pred             CCCcEEecceEEEEEeeeeceEEccCCeEEEEe-eeeEEEccCCCCCCC-CCeEEcCCccee------------------
Q psy11460          2 QKVNIELGPLLSREDMQKVNIEFHDNGTVTFQH-YKILEFVPELSVAPN-NTRFILPNIPLL------------------   61 (927)
Q Consensus         2 ~~~~~EiGPYvYrE~~~K~ni~f~~n~TVsY~~-~~~~~F~pe~S~~~~-~d~I~~pNip~l------------------   61 (927)
                      +|+|+|+|||||+|.++|+|++|++|+|++|.+ +|+|+|+|++|++++ +|.|++||+|++                  
T Consensus        83 kp~v~EvGPyvy~E~~~K~~~~f~~n~tv~f~~~~k~~~F~p~~S~~~~~~d~I~~pN~~~~~a~~~~~~~~~~~~~~~~  162 (507)
T KOG3776|consen   83 KPNVQEVGPYVYREIEQKVNIDFNENNTVSFYQNRKTYVFNPEESVGDCKDDKITVPNIPALGAATSVKREQFLRLAISI  162 (507)
T ss_pred             CCceEeeCCeEEEEEecccceeeccCCcEEEEeeccEEEechhhcCCCcCcCeEEecCchhhhhhhhhhhhHHHHHHHHH
Confidence            689999999999999999999999999987777 999999999999877 799999998843                  


Q ss_pred             -------------------------------------------------ccccccccEEEEcCCCCcccccceEeeCCcc
Q psy11460         62 -------------------------------------------------RNGTISEVQTIYTGHGGMENFGYMDKLNGLD   92 (927)
Q Consensus        62 -------------------------------------------------~NgT~dg~~tI~TG~~di~~~G~I~~wnG~~   92 (927)
                                                                       +|||.||.|+|+||++|++++|+|++|||.+
T Consensus       163 ~~~~~~~~~f~~~tV~e~Lf~GYeDpll~l~~~~~~~~~~~~r~G~~~~~Ngt~d~~y~V~tG~dd~~k~g~I~~wng~~  242 (507)
T KOG3776|consen  163 ALTILGEKPFVTVTVGELLFDGYEDPLLSLINRFVPIKPPSPRFGLFYGYNGTSDGVYTVNTGKDDISKFGQIDTWNGLT  242 (507)
T ss_pred             HHHHhCCCcceEeeHHHHHHhhcccHHHHHHhhcCCcCCcccceeeecccCCCccccEEEecCCCCHHHCeeeeEECCcc
Confidence                                                             8999999999999999999999999999999


Q ss_pred             CCCCcCCCCCCceeCCCCCCCCCCCCCCCceEEEEeccceeEEEEEEeeeeeeCCeeEEEEecCCCCCCCCCCCCCCCCC
Q psy11460         93 HLPYWDEAPCNAIKASEGSFFPPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCY  172 (927)
Q Consensus        93 ~l~~W~~~~Cn~InGTDG~~fpP~~l~~~d~L~iF~~DlCRsl~l~y~~~~~~~GI~~~RY~~~~~~fd~~~~np~n~Cf  172 (927)
                      +++||.+++|++|+||||++|||+ +++++++++|.+|+||+++++|+++++++||++|||+++.+.||++..+|++.||
T Consensus       243 ~l~~W~~~~c~~I~Gtdgs~FpP~-l~k~d~l~if~~~~CRsi~l~y~~~~~~~Gi~~~rf~~p~~~~d~~~~~~~~~Cy  321 (507)
T KOG3776|consen  243 HLPWWETDECNMINGTDGSLFPPF-LQKEDELYIFSSDLCRSIPLTYSETVTVNGIPAYRFVVPEDSFDNTLDNPDGFCY  321 (507)
T ss_pred             cCCccCccccccccCCCcccCCCc-cCCCCeeEEEchhhhcceEeEeeeEEEECCccceeeccchhhcCCCCCCCCcccc
Confidence            999999999999999999999997 9999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCC-CCCCCCceeeCCCCCCCCceeecccccccCChhhhhcccccCCCcccCcceEeeeccCCccceeeeEeEEEEEec
Q psy11460        173 CPGQ-TKCPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRVQLNLAVE  251 (927)
Q Consensus       173 C~~~-~~C~p~GlldlS~C~~GaPi~~S~PHFy~aDp~l~~~V~GL~Pd~ekH~t~idiEP~TGvpL~a~~RlQiNl~v~  251 (927)
                      |.+. .+|+|+|++|+|+|++|+|+++|+||||+|||+|+++|+||+|++|+|++|++|||.||+||++++|+|+|+.|.
T Consensus       322 ~~~~~~~Clp~G~~niS~C~~~~pv~~S~PHFy~adp~~~~~v~Gl~P~~e~He~~~dieP~tG~plq~~~RlQiNl~v~  401 (507)
T KOG3776|consen  322 CTEKKPNCLPSGVLNISQCQGGAPVYLSFPHFYLADPVLVEAVEGLNPNKEKHETYFDIEPKTGTPLQAAKRLQINLPVE  401 (507)
T ss_pred             CccccCCCCccCceeehhhcCCCcceecCchhccCCHhHHhcCCCCCCChhhCceEEEeccCCCCeeEEeEEEEEEEEec
Confidence            9753 359999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             C-CccccccCCcceEEeeEEEeeccCCCChhHHHHHHHHhhcccchHhHHHHHHHHHHHHHHHHHHHHhhhccc
Q psy11460        252 E-SNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILEYGFIIFGSLVLIVVFVRAYKSLV  324 (927)
Q Consensus       252 ~-~~i~~~~~~~~~ilPlfW~ee~~~~l~~~i~~~l~~~~~i~p~i~~~l~~~li~lGlilliv~~~~~yk~~~  324 (927)
                      + +++..+++++++++|+||+||++. +++++.+++++++...+.++..+.++++++|++++++.++..+++..
T Consensus       402 ~~~~~~~~~~~~~~i~Pl~W~~e~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~  474 (507)
T KOG3776|consen  402 PVKGIRSMSNLPNVIIPLFWLEEGVG-LSDETLNLIKLGLVLKPNIVLYLLYLLLLLGVVLLALIVFCVIRSLV  474 (507)
T ss_pred             ccCCccccccccceEeeEEEEeeccC-ccHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHhheeEecccc
Confidence            9 999999999999999999999985 99999999999988889999999999999999999888887776544

>PF01130 CD36: CD36 family; InterPro: IPR002159 CD36 is a transmembrane, highly glycosylated, 88kDa glycoprotein expressed by monocytes, macrophages, platelets, microvascular endothelial cells and adipose tissues

Probab=100.00  E-value=2.2e-70  Score=634.70  Aligned_cols=332  Identities=32%  Similarity=0.561  Sum_probs=302.6

Q ss_pred             ccccccccccCCcceEEEEeeeccCChHhHhhhcCCCCcccC--cccEEEEeeecCccccCCe-EEEEE------Eeeec
Q psy11460        354 IRDSYSLLGNHNAPVFLSFPHFYKADPELLDAVEGLTPNQEK--HETFFKIQPKLGVPLEAAV-RVQLN------LAVEE  424 (927)
Q Consensus       354 ~s~~y~~W~~pp~PiylsfY~FNvTNPeev~~veG~kPn~ee--pytY~e~epk~gi~~~~~~-tvq~n------f~~~~  424 (927)
                      ++.+|+.|.++|+|+++++|+||+|||+|+++ .|.||+++|  ||+|+|.+.|.++.|+++. +|+|+      |.++.
T Consensus        37 ~s~~~~~W~~~p~p~~~~~y~fNvTNp~ev~~-~g~kP~~~EvGPY~y~e~~~k~nv~~~~~~~tvsY~~~~~~~F~~~~  115 (467)
T PF01130_consen   37 GSDSYDNWKKPPVPIYFKFYFFNVTNPEEVLN-GGAKPNVQEVGPYVYREYREKVNVTFNDNGSTVSYRQKRTFFFDPEL  115 (467)
T ss_pred             CChhHhhhhcCCCccEEEEEEEeccCHHHHhC-cCCCceEEEeCCEEEEeeeeeeeeEEcCCCcEEEEEeeeeEEecccc
Confidence            34799999999999999999999999999985 399999888  9999999999999998665 88764      44556


Q ss_pred             cCc-ceeccceecccchHHHHHHHhhhhhcchhhHHHHHHHHHhhcCCCceEeeeeceeec-cCCchHHHhhhh----cC
Q psy11460        425 SNI-HVVRGFRSITFPIMWVEETLTSQANALKPLMKTGVSLALRMTSMKPFVSITAEELVF-GYDDTLTSLANR----FF  498 (927)
Q Consensus       425 s~~-~~~d~I~tvniPll~i~~tltSl~~~~~~~vk~~i~~~l~~~~~~pFvt~TV~elLf-GY~DpLL~~~~~----~~  498 (927)
                      |++ +.+|.|+++|+|++.+...+.    .+.++++.+++.+++..++++|+++||+|+|| ||+||+++.+++    +.
T Consensus       116 S~~~~~~d~it~~N~~~l~~~~~~~----~~~~~~~~~~~~~l~~~~~~~fv~~tv~e~Lf~GY~dpll~~~~~~~~~~~  191 (467)
T PF01130_consen  116 SCGCSEDDTITTPNIPLLGAASLVR----NMSPFVKSLINLLLNSLGEKLFVTRTVRELLFDGYEDPLLSLAKKLLDFLR  191 (467)
T ss_pred             CCCCCccceEEeccHHHhhhhhhhc----cccHHHHHHHHHhhhccCCcceEeccHHHhhhccCchHHHHHHhhhhhhcC
Confidence            777 678999999999887776543    46789999999999999999999999999999 999999999998    55


Q ss_pred             CCCCCCCCccceecccCCcccccEEEEcCCCCCcceeeEEeeCCCCCCCCcCCCCCCceeCCCCCCCCCCCCCCCceEEE
Q psy11460        499 PKGKRPPRKMGLFLGRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSDLVHV  578 (927)
Q Consensus       499 P~~~~p~~kfGlf~~~N~T~dg~~tV~TG~~d~~~~G~I~~wnG~t~L~~W~~~~Cn~I~GTDG~~FpP~~l~k~d~L~i  578 (927)
                      |.. .+.++||||.++|+|.+|.|+|+||++|++++|+|.+|||++++++|.+++||+|+||||++|||+ +++++.|++
T Consensus       192 ~~~-~~~~~fg~~~~~N~t~~~~~~v~TG~~d~~~~g~i~~~ng~~~l~~w~~~~cn~i~GtdG~~fpP~-l~~~~~l~~  269 (467)
T PF01130_consen  192 PDL-IPFDKFGLFYGRNGTYDGVYTVNTGKDDISKVGQIDSWNGSTSLTYWNGEECNMINGTDGSFFPPF-LTKDDTLYV  269 (467)
T ss_pred             Ccc-CCCCccccccccCCCCceeEEEECCCCChhhhceeeEECCcccCCCcCCccccceeCCccCccCCC-CCCCceEEE
Confidence            553 368999999999999999999999999999999999999999999999999999999999999997 999999999


Q ss_pred             eccccceeeEEEEeeeEEEcCeEeEEEecCCCCCCCCCCCCCCCcCCCCCCC---CCccceeeccccCCCccccccccce
Q psy11460        579 YDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQTK---CPPKGLQNISPCQFANLLQSNLSNS  655 (927)
Q Consensus       579 F~~dlCRsl~L~y~~e~~~~GI~~yRY~~~~~~fdn~~~~p~N~cfC~~~~~---Clp~GlldlS~C~~G~~~~s~fp~f  655 (927)
                      |++|+|||++++|+++++++||+++||++++++|++++.+|+|+|||.+...   |+|+|++|+|+|++|+      |++
T Consensus       270 f~~dlCRs~~l~y~~~~~~~Gi~~~rf~~~~~~f~~~~~~~~n~c~C~~~~~~~~c~p~G~~~ls~C~~g~------Pi~  343 (467)
T PF01130_consen  270 FSSDLCRSLPLEYEEEVTVKGIPAYRFVLPPNVFDNGSNNPENKCFCPKNSDECNCLPSGLLNLSPCQFGA------PIF  343 (467)
T ss_pred             EehhcceeEEEEEecceecCCeEEEEEEEChhHhcCcCcCccccccCCCCCcccccCCcceEechhhcCCC------Ccc
Confidence            9999999999999999999999999999999999999999999999987643   9999999999999894      569


Q ss_pred             eccCccccccccccccccCCCCCCcccccCCCCCccccCcccc---ccccccccccc
Q psy11460        656 LNLPNLFVVSRYYDILKRDRVVPSSWLDKGLDASWKTHSHEGD---NLGHLRQHQID  709 (927)
Q Consensus       656 vS~PhFy~~d~~y~~~~~~~~~~~~~~v~gl~p~~~~h~~~~d---~~~~~~~~~~~  709 (927)
                      +|+||||+||++|.+           .|.||+|+.++|++.+|   .||..+|+.+.
T Consensus       344 ~S~PHF~~adp~~~~-----------~v~Gl~Pd~~~H~~~~~iEP~tG~~l~~~~r  389 (467)
T PF01130_consen  344 VSFPHFYNADPSLLE-----------AVEGLNPDPEKHETYIDIEPTTGIPLQAAKR  389 (467)
T ss_pred             ccCcccccCChhhhh-----------cCCCCCCCcccceeEEEeecccCeeeeeeEe
Confidence            999999999999855           99999999999999999   48888887644

Platelet glycoprotein IV (GP IV)(GPIIIb) (CD36 antigen) is also called GPIV, OKM5-antigen or PASIV. CD36 recognises oxidized low density lipoprotein, long chain fatty acids, anionic phospholipids, collagen types I, IV and V, thrombospondin (TSP) and Plasmodium falciparum infected erythrocytes. The recognition of apoptotic neutrophils is in co-operation with TSP and avb3. Other ligands may still be unknown. CD36 is a scavenger receptor for oxidized LDL and shed photoreceptor outer segments and in recognition and phagocytosis of apoptotic cells and is the cell adhesion molecule in platelet adhesion and aggregation, platelet-monocyte and platelet-tumor cell interaction []. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0007155 cell adhesion, 0016020 membrane

>KOG3776|consensus

Probab=100.00  E-value=1.2e-68  Score=614.97  Aligned_cols=328  Identities=31%  Similarity=0.573  Sum_probs=298.8

Q ss_pred             ccccccccCCcceEEEEeeeccCChHhHhhhcCCCCcccC--cccEEEEeeecCccccCCeEEE-------EEEeeeccC
Q psy11460        356 DSYSLLGNHNAPVFLSFPHFYKADPELLDAVEGLTPNQEK--HETFFKIQPKLGVPLEAAVRVQ-------LNLAVEESN  426 (927)
Q Consensus       356 ~~y~~W~~pp~PiylsfY~FNvTNPeev~~veG~kPn~ee--pytY~e~epk~gi~~~~~~tvq-------~nf~~~~s~  426 (927)
                      .+++.|.+||+|+++++|+||||||+|++. .|.||+++|  ||+|+|.+.|.++.++++.++.       +.|.++.|+
T Consensus        50 ~~~~~W~~pp~~~~~~~yiFNvTNpde~~~-~~~kp~v~EvGPyvy~E~~~K~~~~f~~n~tv~f~~~~k~~~F~p~~S~  128 (507)
T KOG3776|consen   50 DAFESWLNPPYPIYLNFYIFNVTNPDEFLS-GGAKPNVQEVGPYVYREIEQKVNIDFNENNTVSFYQNRKTYVFNPEESV  128 (507)
T ss_pred             hhhhhhhcCCCccEEEEEEEecCCHHHhhC-cCCCCceEeeCCeEEEEEecccceeeccCCcEEEEeeccEEEechhhcC
Confidence            889999999999999999999999999985 389999888  9999999999999777665543       236667788


Q ss_pred             cce-eccceecccchHHHHHHHhhhhhcchhhHHHHHHHHHhhcCCCceEeeeeceeec-cCCchHHHhhhhcCCCCCCC
Q psy11460        427 IHV-VRGFRSITFPIMWVEETLTSQANALKPLMKTGVSLALRMTSMKPFVSITAEELVF-GYDDTLTSLANRFFPKGKRP  504 (927)
Q Consensus       427 ~~~-~d~I~tvniPll~i~~tltSl~~~~~~~vk~~i~~~l~~~~~~pFvt~TV~elLf-GY~DpLL~~~~~~~P~~~~p  504 (927)
                      +.+ .|.|+.+|+|++.++..+.    ... +++.++++++..+++++|+++||+|+|| ||+|||+++++++.| ..++
T Consensus       129 ~~~~~d~I~~pN~~~~~a~~~~~----~~~-~~~~~~~~~~~~~~~~~f~~~tV~e~Lf~GYeDpll~l~~~~~~-~~~~  202 (507)
T KOG3776|consen  129 GDCKDDKITVPNIPALGAATSVK----REQ-FLRLAISIALTILGEKPFVTVTVGELLFDGYEDPLLSLINRFVP-IKPP  202 (507)
T ss_pred             CCcCcCeEEecCchhhhhhhhhh----hhH-HHHHHHHHHHHHhCCCcceEeeHHHHHHhhcccHHHHHHhhcCC-cCCc
Confidence            877 6888999999876654433    333 8899999999999999999999999999 999999999999777 4457


Q ss_pred             CCccceecccCCcccccEEEEcCCCCCcceeeEEeeCCCCCCCCcCCCCCCceeCCCCCCCCCCCCCCCceEEEeccccc
Q psy11460        505 PRKMGLFLGRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFPPRDLTKSDLVHVYDKDLC  584 (927)
Q Consensus       505 ~~kfGlf~~~N~T~dg~~tV~TG~~d~~~~G~I~~wnG~t~L~~W~~~~Cn~I~GTDG~~FpP~~l~k~d~L~iF~~dlC  584 (927)
                      .++||+|+.+|||.||.|+|+||++|++++|+|.+|||.++++||.+++|++|+||||++|||+ ++++|++++|.+|+|
T Consensus       203 ~~r~G~~~~~Ngt~d~~y~V~tG~dd~~k~g~I~~wng~~~l~~W~~~~c~~I~Gtdgs~FpP~-l~k~d~l~if~~~~C  281 (507)
T KOG3776|consen  203 SPRFGLFYGYNGTSDGVYTVNTGKDDISKFGQIDTWNGLTHLPWWETDECNMINGTDGSLFPPF-LQKEDELYIFSSDLC  281 (507)
T ss_pred             ccceeeecccCCCccccEEEecCCCCHHHCeeeeEECCcccCCccCccccccccCCCcccCCCc-cCCCCeeEEEchhhh
Confidence            8999999999999999999999999999999999999999999999999999999999999998 999999999999999


Q ss_pred             eeeEEEEeeeEEEcCeEeEEEecCCCCCCCCCCCCCCCcCCCCC-CCCCccceeeccccCCCccccccccceeccCcccc
Q psy11460        585 RIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCYCPGQ-TKCPPKGLQNISPCQFANLLQSNLSNSLNLPNLFV  663 (927)
Q Consensus       585 Rsl~L~y~~e~~~~GI~~yRY~~~~~~fdn~~~~p~N~cfC~~~-~~Clp~GlldlS~C~~G~~~~s~fp~fvS~PhFy~  663 (927)
                      |+++++|+++++++||++|||+++.+.||++..+|++.|||.+. .+|+|+|++|+|+|++|+|      +++|+||||+
T Consensus       282 Rsi~l~y~~~~~~~Gi~~~rf~~p~~~~d~~~~~~~~~Cy~~~~~~~Clp~G~~niS~C~~~~p------v~~S~PHFy~  355 (507)
T KOG3776|consen  282 RSIPLTYSETVTVNGIPAYRFVVPEDSFDNTLDNPDGFCYCTEKKPNCLPSGVLNISQCQGGAP------VYLSFPHFYL  355 (507)
T ss_pred             cceEeEeeeEEEECCccceeeccchhhcCCCCCCCCccccCccccCCCCccCceeehhhcCCCc------ceecCchhcc
Confidence            99999999999999999999999999999999999999999753 4599999999999999965      5899999999


Q ss_pred             ccccccccccCCCCCCcccccCCCCCccccCcccc---cccccccccc
Q psy11460        664 VSRYYDILKRDRVVPSSWLDKGLDASWKTHSHEGD---NLGHLRQHQI  708 (927)
Q Consensus       664 ~d~~y~~~~~~~~~~~~~~v~gl~p~~~~h~~~~d---~~~~~~~~~~  708 (927)
                      ||+.|.+           .|+||+|+.|+|+..+|   .+|..+|+++
T Consensus       356 adp~~~~-----------~v~Gl~P~~e~He~~~dieP~tG~plq~~~  392 (507)
T KOG3776|consen  356 ADPVLVE-----------AVEGLNPNKEKHETYFDIEPKTGTPLQAAK  392 (507)
T ss_pred             CCHhHHh-----------cCCCCCCChhhCceEEEeccCCCCeeEEeE
Confidence            9998854           99999999999999999   6999999874

>PF11271 DUF3068: Protein of unknown function (DUF3068); InterPro: IPR021424 Some members in this family of proteins with unknown function are annotated as membrane proteins however this cannot be confirmed

Probab=97.18  E-value=0.0017  Score=72.42  Aligned_cols=156  Identities=15%  Similarity=0.162  Sum_probs=86.9

Q ss_pred             CCCCCCCCCCceEEEEeccceeEEEEEEeeeeeeCCeeEEEEec--CCCCCCCCCCCCCCCCCCCCCCCCCCCceeeCCC
Q psy11460        112 FFPPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTP--DDEIFSPGESQPENKCYCPGQTKCPPKGLQNISP  189 (927)
Q Consensus       112 ~fpP~~l~~~d~L~iF~~DlCRsl~l~y~~~~~~~GI~~~RY~~--~~~~fd~~~~np~n~CfC~~~~~C~p~GlldlS~  189 (927)
                      .||++  .+.....+|.+.+-++.+++|.++.+++|+++|||+-  ++.....   .+.+       ..-++.-+     
T Consensus       141 kFPf~--tek~~Y~~fD~~~r~a~p~~f~ge~~v~G~~vY~F~q~i~~t~l~~---~~~~-------~~~~~~~~-----  203 (301)
T PF11271_consen  141 KFPFD--TEKRSYPYFDPTTRTAVPADFVGEEEVDGREVYRFEQEIPPTDLAS---DEDS-------TRTLPASL-----  203 (301)
T ss_pred             ECCCC--CCCCCcccCCcccCcccceEeccceEECCEEEEEEEEEeCCcccCc---cccc-------cccccccc-----
Confidence            37764  4456699999999999999999999999999999984  2222220   0000       00000000     


Q ss_pred             CCCCCceeecccccccCChhhhhcccccCCCcccCcc--eEeeeccCCccceeeeEeEEEEEecCCccccccCCcceEEe
Q psy11460        190 CQFDAPVFLSFPHFYKADPELLDAVEGLTPNQEKHET--FFKIQPKLGVPLEAAVRVQLNLAVEESNIHVVRGFRSITFP  267 (927)
Q Consensus       190 C~~GaPi~~S~PHFy~aDp~l~~~V~GL~Pd~ekH~t--~idiEP~TGvpL~a~~RlQiNl~v~~~~i~~~~~~~~~ilP  267 (927)
                        .+.++-+  .                    --|..  -+.|||.||+++++...++.-+......     .+.-.-.-
T Consensus       204 --~~~~v~~--~--------------------~~y~~~r~lwVeP~TG~iV~~~e~~~~~~~~~~~~-----~~~~l~~~  254 (301)
T PF11271_consen  204 --PGGSVTM--D--------------------RYYSATRTLWVEPVTGVIVDVEEDQHDYYADDDGE-----RRTVLDAD  254 (301)
T ss_pred             --CCCccEE--E--------------------EEEeeeEEEEEcCCCCcEEeeEEEEEEEEecCCCc-----eEEEEEEE
Confidence              0111111  0                    01111  6889999999999876554433222221     11222233


Q ss_pred             eEEEeeccCCCChhHHHHHHHHhhcccchHhHHHHHHHHHHHHHHHHHHH
Q psy11460        268 IMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILEYGFIIFGSLVLIVVFV  317 (927)
Q Consensus       268 lfW~ee~~~~l~~~i~~~l~~~~~i~p~i~~~l~~~li~lGlilliv~~~  317 (927)
                      +-|-+++++.+-++.+.    ....+..+..++.|++.++|+++++++++
T Consensus       255 ~~~~e~t~~~~~~~A~~----~~~~l~~~~~~~P~~~~vlG~vll~~g~~  300 (301)
T PF11271_consen  255 FRYDEETVAALVDQAKD----VRSQLRLWGRWVPIVLGVLGVVLLLVGLV  300 (301)
T ss_pred             EecCHHHHHHHHHHHhh----ccceeeeeeeeHHHHHHHHHHHHHHHHhh
Confidence            33444433222222222    22222234567889999999999988875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	927
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-14
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 76.4 bits (187), Expect = 3e-14
 Identities = 90/657 (13%), Positives = 187/657 (28%), Gaps = 194/657 (29%)

Query: 195 PVFLSFPHFYKAD---PELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRVQLNLAVE 251
            VF     F   +    ++ D  + +   +E               +   +R+   L  +
Sbjct: 23  SVFE--DAF-VDNFDCKDVQDMPKSILSKEEIDHII-----MSKDAVSGTLRLFWTLLSK 74

Query: 252 ESNIHVVRGFRSITFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPILEYGFIIFGSLV 311
           +  +  V+ F         VEE    L  N ++++           P +           
Sbjct: 75  QEEM--VQKF---------VEEV---LRIN-YKFLMSPIKTEQR-QPSMMT--------- 109

Query: 312 LIVVFVRAYKSL-----VFTQENLERGRE---------KLRRGSSFIVNGQHRLM----- 352
              +++     L     VF + N+ R +          +LR   + +++G    +     
Sbjct: 110 --RMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG----VLGSGK 163

Query: 353 ------IIRDSYSLLGNHNAPVF-LSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPK 405
                 +    Y +    +  +F L+  +   +   +L+ ++ L          ++I P 
Sbjct: 164 TWVALDVCLS-YKVQCKMDFKIFWLNLKN-CNSPETVLEMLQKL---------LYQIDPN 212

Query: 406 LGVPLEAAVRVQLNLAVEESNIHVVRGFRSITFP----IM---WVEETLTSQANAL---- 454
                + +  ++L +        + R  +S  +     ++      +      NA     
Sbjct: 213 WTSRSDHSSNIKLRI--HSIQAELRRLLKSKPYENCLLVLLNVQNAKAW----NAFNLSC 266

Query: 455 KPLMKT---GVSLALRMTSMKPFVSITAEELVFGYDDTLTSLANRFFPKGKRPPRKMGLF 511
           K L+ T    V+  L   +    +S+    +    D+  + L      + +  PR     
Sbjct: 267 KILLTTRFKQVTDFLSAATTTH-ISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR----- 320

Query: 512 LGRNGTISEVQTIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAI-KASEGSF--FPPR 568
                   EV T       +       + +GL     W    C+ +    E S     P 
Sbjct: 321 --------EVLTTNPRRLSI--IAESIR-DGLATWDNWKHVNCDKLTTIIESSLNVLEPA 369

Query: 569 DLTK--SDLVHVYDKD-------LCRIWP-------------LRYRRDVEKDGLKAGYYT 606
           +  K    L  V+          L  IW              L     VEK   ++    
Sbjct: 370 EYRKMFDRLS-VFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI 428

Query: 607 PD--DEIFSPGESQPE-----------NKCYCPGQTKCPPKGLQNISPCQFA-NLLQSNL 652
           P    E+    E++              K +        P  L          +L     
Sbjct: 429 PSIYLELKVKLENEYALHRSIVDHYNIPKTFDSD--DLIPPYLDQYFYSHIGHHLKNIEH 486

Query: 653 SNSLNL-PNLFVVSRYYDILKRDRVVPSSWLDKGL---DASWKTHSHEGDNLGHLR---Q 705
              + L   +F+     D           +L++ +     +W       + L  L+    
Sbjct: 487 PERMTLFRMVFL-----DF---------RFLEQKIRHDSTAWNASGSILNTLQQLKFYKP 532

Query: 706 HQIDETP-------NIMNAFPTLIGSVFLVSPF----QAALLCSYNYIGLSFLESAR 751
           +  D  P        I++ F   I    + S +    + AL+     I   F E+ +
Sbjct: 533 YICDNDPKYERLVNAILD-FLPKIEENLICSKYTDLLRIALMAEDEAI---FEEAHK 585

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.2 bits (132), Expect = 1e-07
 Identities = 78/663 (11%), Positives = 167/663 (25%), Gaps = 194/663 (29%)

Query: 117 DLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLKAGYYTPDDEIFSPGESQPENKCY---- 172
                D++ V++      +  +  +D+ K  L        D I         +       
Sbjct: 15  QYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEI---DHII--MSKDAVSGTLRLFW 69

Query: 173 --CPGQTKCPPKGLQNISPCQFDAPVFLSFPHFYKADPELLDA--VEGLTPNQEKHETFF 228
                Q +   K ++ +   + +    +S     +  P ++    +E        ++ F 
Sbjct: 70  TLLSKQEEMVQKFVEEV--LRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF- 126

Query: 229 KIQPKLGVPLEAAVRVQLNLAVEE----SNIHVVRGFRSITFPIMWVEEGIG-------- 276
               K  V        +L  A+ E     N+ ++ G        +    G G        
Sbjct: 127 ---AKYNVSRLQPYL-KLRQALLELRPAKNV-LIDG--------V---LGSGKTWVALDV 170

Query: 277 --------DLPPNIHRWIYLATSFAPNIAPILEYGFIIFGSLVLIVVFVRAYKSLVFTQE 328
                    +   I  W+ L    +P    +LE          L+      + S      
Sbjct: 171 CLSYKVQCKMDFKIF-WLNLKNCNSPET--VLEM------LQKLLYQIDPNWTSRSDHSS 221

Query: 329 N----LERGREKLRRGSSFIVNGQHR--LMIIRDSYS-------------LLGNHNAPVF 369
           N    +   + +LRR    + +  +   L+++ +  +             LL      V 
Sbjct: 222 NIKLRIHSIQAELRR---LLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVT 278

Query: 370 LSFPHFYKADPELLDAVEGLTPNQEKHETFFKIQPKLGVPLEAAVRVQLNLAVEESNIH- 428
                       L      LTP++ K     K    L    +       +L  E    + 
Sbjct: 279 DFLSAATTTHISLDHHSMTLTPDEVK-SLLLKY---LDCRPQ-------DLPREVLTTNP 327

Query: 429 -----VVRGFRSITFPIMWVEETLTSQANALKPLMKTGVSLALRMTSMKP-------F-- 474
                +    R       W +       + L  ++++ ++  L     +        F  
Sbjct: 328 RRLSIIAESIRD--GLATW-DNWKHVNCDKLTTIIESSLN-VLEPAEYRKMFDRLSVFPP 383

Query: 475 -VSITAE--ELVFGYDDT------LTSLANRFFPKGKRPPRK---MGLFLGRNGTISEVQ 522
              I      L++           +  L      + +          ++L     +    
Sbjct: 384 SAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEY 443

Query: 523 TIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAIKASEGSFFP--PRDLTKSDLVHVYD 580
            +   H  +     +D  N        D  P       +  F+      L   +      
Sbjct: 444 AL---HRSI-----VDHYNIPKTFDSDDLIP----PYLDQYFYSHIGHHLKNIEHPERMT 491

Query: 581 KDLCRIWPLRYR---RDVEKDGLKAG-----------------YYTPDDEI--------- 611
             L R+  L +R   + +  D                      Y   +D           
Sbjct: 492 --LFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAIL 549

Query: 612 -FSPGESQPENKCYCPGQTKCPPKGLQNISPCQFANLLQSNLSNSLNLPNLFVVSRYYDI 670
            F P   + E    C                 ++ +LL+  L       +  +    +  
Sbjct: 550 DFLP---KIEENLIC----------------SKYTDLLRIALMA----EDEAIFEEAHKQ 586

Query: 671 LKR 673
           ++R
Sbjct: 587 VQR 589

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.6 bits (107), Expect = 8e-05
 Identities = 49/336 (14%), Positives = 96/336 (28%), Gaps = 90/336 (26%)

Query: 560 SEGSFFPPRDLTKSDLVHVYDKDLCRIWPLRYRRDVEKDGLK-AG--------------Y 604
           ++   F   ++++        + L     LR  ++V  DG+  +G               
Sbjct: 121 NDNQVFAKYNVSRLQPYLKLRQALLE---LRPAKNVLIDGVLGSGKTWVALDVCLSYKVQ 177

Query: 605 YTPDDEIF--SPGESQPENKCYCPGQTKCPPKGLQNISPCQFANLLQSNLSNSLNLP-NL 661
              D +IF  +         C  P       + LQ +   Q      S   +S N+   +
Sbjct: 178 CKMDFKIFWLNLK------NCNSPETV---LEMLQKLLY-QIDPNWTSRSDHSSNIKLRI 227

Query: 662 FVVSRYYDILKRDRVVPSSWLDKGLDASWKTHSHEGDNLGHLRQHQIDETPNIMNAF--- 718
             +      L + +   +  L   L                             NAF   
Sbjct: 228 HSIQAELRRLLKSKPYENCLLV--LLNVQ--------------------NAKAWNAFNLS 265

Query: 719 -PTLI----GSVFLVSPFQAALLCSYNYIGLSFLESARGKEFVSLF-EILN-----LP-- 765
              L+      V            S ++  ++        E  SL  + L+     LP  
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD----EVKSLLLKYLDCRPQDLPRE 321

Query: 766 ----NLFVVSRYYDILKRDRVLPSSWLDKGLDASWKTHVTYYDDSQTTPDVDRNITPLQR 821
               N   +S    I +  R   ++W       +WK    + +  + T  ++ ++  L+ 
Sbjct: 322 VLTTNPRRLSI---IAESIRDGLATW------DNWK----HVNCDKLTTIIESSLNVLEP 368

Query: 822 VRIIRREKNFTSFPDDSASPYRLFKRFTVPLSSTDV 857
               +     + FP  +  P  L       +  +DV
Sbjct: 369 AEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDV 404

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 1e-04
 Identities = 51/336 (15%), Positives = 91/336 (27%), Gaps = 104/336 (30%)

Query: 12  LSREDMQKVNIEFHDNGTVTFQHYKILE-FVPELSVAPNNTRFILPNIPLLRNGTISEVQ 70
           LS      ++++ H          ++    +  L   P +    LP           EV 
Sbjct: 281 LSAATTTHISLDHHSMT---LTPDEVKSLLLKYLDCRPQD----LP----------REVL 323

Query: 71  TIYTGHGGMENFGYMDKLNGLDHLPYWDEAPCNAI-KASEGSF--FPPRDLTK--SDLVH 125
           T       +       + +GL     W    C+ +    E S     P +  K    L  
Sbjct: 324 TTNPRRLSI--IAESIR-DGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS- 379

Query: 126 VYDKD-------LCRIWP-------------LRYRRDVEKDGLKAGYYTPDDEIFSPGES 165
           V+          L  IW              L     VEK   ++    P   I+   + 
Sbjct: 380 VFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS--IYLELKV 437

Query: 166 QPENK---------CYCPGQTKCPPKGLQNISPCQFDAPVF--LSFPHFYKADPELLDAV 214
           + EN+          Y   +T        ++ P   D   +  +   H    +       
Sbjct: 438 KLENEYALHRSIVDHYNIPKTFDS----DDLIPPYLDQYFYSHIGH-HLKNIEHP----- 487

Query: 215 EGLTPNQEKHETF------FK-IQPKL---GVPLEAAVRVQLNLAVEESNIHVVRGFRSI 264
                  E+   F      F+ ++ K+        A+  + LN       +  ++ ++  
Sbjct: 488 -------ERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSI-LNT------LQQLKFYKPY 533

Query: 265 TFPIMWVEEGIGDLPPNIHRWIYLATSFAPNIAPIL 300
                     I D  P   R +     F P I   L
Sbjct: 534 ----------ICDNDPKYERLVNAILDFLPKIEENL 559

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00