Psyllid ID: psy1157

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------15
MEFIMGGTAAAGAAFFTNPLDVVKVRFQLQGELKAKGLYAVHYKNLFHAFFQIAKHDGFLALQKGLMPAACHQVVLNGVRLGTYQVAEERGWTMGPDGNVYILNNIAVGLMAGGAGAFLGSPILLKISLAIQRGHCSSIMSTLPSGNM
cccHHHHHHHHccccccccHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccEEEcHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccccccccccccccc
ccHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccEEEEEHHHHccccccccccccccccc
mefimggtaaagaafftnpLDVVKVRFQLQGELKAKGLYAVHYKNLFHAFFQIAKHDGFLAlqkglmpaacHQVVLNGVRLGTYQVAeergwtmgpdgnvyILNNIAVGLMAggagaflgspILLKISLAIQRGHcssimstlpsgnm
MEFIMGGTAAAGAAFFTNPLDVVKVRFQLQGELKAKGLYAVHYKNLFHAFFQIAKHDGFLALQKGLMPAACHQVVLNGVRLGTYQVAEERGWTMGPDGNVYILNNIAVGLMAGGAGAFLGSPILLKISLAIQRGHCSsimstlpsgnm
MEFIMggtaaagaafftNPLDVVKVRFQLQGELKAKGLYAVHYKNLFHAFFQIAKHDGFLALQKGLMPAACHQVVLNGVRLGTYQVAEERGWTMGPDGNVYILNNIavglmaggagaflgSPILLKISLAIQRGHCSSIMSTLPSGNM
***IMGGTAAAGAAFFTNPLDVVKVRFQLQGELKAKGLYAVHYKNLFHAFFQIAKHDGFLALQKGLMPAACHQVVLNGVRLGTYQVAEERGWTMGPDGNVYILNNIAVGLMAGGAGAFLGSPILLKISLAIQRGHCS***********
MEFIMGGTAAAGAAFFTNPLDVVKVRFQL****************LFHAFFQIAKHDGFLALQKGLMPAACHQVVLNGVRLGTYQVAEERGW*****GNVYILNNIAVGLMAGGAGAFLGSPILLKISLAIQ*********TLP*G**
MEFIMGGTAAAGAAFFTNPLDVVKVRFQLQGELKAKGLYAVHYKNLFHAFFQIAKHDGFLALQKGLMPAACHQVVLNGVRLGTYQVAEERGWTMGPDGNVYILNNIAVGLMAGGAGAFLGSPILLKISLAIQRGHCSSIMSTLPSGNM
MEFIMGGTAAAGAAFFTNPLDVVKVRFQLQGELKAKGLYAVHYKNLFHAFFQIAKHDGFLALQKGLMPAACHQVVLNGVRLGTYQVAEERGWTMGPDGNVYILNNIAVGLMAGGAGAFLGSPILLKISLAIQR***************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
oooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
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MEFIMGGTAAAGAAFFTNPLDVVKVRFQLQGELKAKGLYAVHYKNLFHAFFQIAKHDGFLALQKGLMPAACHQVVLNGVRLGTYQVAEERGWTMGPDGNVYILNNIAVGLMAGGAGAFLGSPILLKISLAIQRGHCSSIMSTLPSGNM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query148 2.2.26 [Sep-21-2011]
Q5SWT3 300 Solute carrier family 25 yes N/A 0.891 0.44 0.548 2e-33
A3KPP4 298 Solute carrier family 25 yes N/A 0.925 0.459 0.517 3e-33
Q58DS3249 Solute carrier family 25 yes N/A 0.891 0.530 0.526 3e-32
Q3KQZ1 300 Solute carrier family 25 no N/A 0.891 0.44 0.541 7e-28
Q6PH61 319 Solute carrier family 25 no N/A 0.648 0.300 0.458 2e-18
Q9UTN1 320 Mitochondrial oxaloacetat yes N/A 0.824 0.381 0.428 4e-18
Q5XIF9 318 Solute carrier family 25 no N/A 0.864 0.402 0.392 2e-15
A2ADF7 318 Solute carrier family 25 no N/A 0.648 0.301 0.416 3e-15
Q6PIV7 304 Solute carrier family 25 no N/A 0.648 0.315 0.416 5e-15
P32332 324 Mitochondrial oxaloacetat yes N/A 0.824 0.376 0.379 1e-14
>sp|Q5SWT3|S2535_MOUSE Solute carrier family 25 member 35 OS=Mus musculus GN=Slc25a35 PE=2 SV=2 Back     alignment and function desciption
 Score =  141 bits (355), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/133 (54%), Positives = 92/133 (69%), Gaps = 1/133 (0%)

Query: 1   MEFIMGGTAAAGAAFFTNPLDVVKVRFQLQGELKAKGLYAVHYKNLFHAFFQIAKHDGFL 60
           M+F+M G AA GA  FTNPL+VVK R QLQGEL+A G Y  HY+N+FHAFF I K DG  
Sbjct: 1   MDFLMSGVAACGACVFTNPLEVVKTRMQLQGELQAPGTYQRHYRNVFHAFFTIGKVDGLA 60

Query: 61  ALQKGLMPAACHQVVLNGVRLGTYQVAEERGWTMGPDGNVYILNNIAVGLMAGGAGAFLG 120
           ALQKGL PA  +Q ++NG+RLGTY +AE RG+    +G    + + A G +AG  GA+LG
Sbjct: 61  ALQKGLGPALLYQFLMNGIRLGTYGLAESRGYLHTNEGTHSPVRSAAAGALAGVMGAYLG 120

Query: 121 SPI-LLKISLAIQ 132
           SPI ++K  L  Q
Sbjct: 121 SPIYMVKTHLQAQ 133

Mus musculus (taxid: 10090)
>sp|A3KPP4|S2535_DANRE Solute carrier family 25 member 35 OS=Danio rerio GN=slc25a35 PE=2 SV=1 Back     alignment and function description
>sp|Q58DS3|S2535_BOVIN Solute carrier family 25 member 35 OS=Bos taurus GN=SLC25A35 PE=2 SV=1 Back     alignment and function description
>sp|Q3KQZ1|S2535_HUMAN Solute carrier family 25 member 35 OS=Homo sapiens GN=SLC25A35 PE=2 SV=1 Back     alignment and function description
>sp|Q6PH61|S2534_DANRE Solute carrier family 25 member 34 OS=Danio rerio GN=slc25a34 PE=2 SV=1 Back     alignment and function description
>sp|Q9UTN1|OAC1_SCHPO Mitochondrial oxaloacetate transport protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=oac1 PE=3 SV=1 Back     alignment and function description
>sp|Q5XIF9|S2534_RAT Solute carrier family 25 member 34 OS=Rattus norvegicus GN=Slc25a34 PE=2 SV=2 Back     alignment and function description
>sp|A2ADF7|S2534_MOUSE Solute carrier family 25 member 34 OS=Mus musculus GN=Slc25a34 PE=2 SV=1 Back     alignment and function description
>sp|Q6PIV7|S2534_HUMAN Solute carrier family 25 member 34 OS=Homo sapiens GN=SLC25A34 PE=2 SV=1 Back     alignment and function description
>sp|P32332|OAC1_YEAST Mitochondrial oxaloacetate transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OAC1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query148
427794597 321 Putative mitochondrial fatty acid anion 0.891 0.411 0.556 6e-35
156379531 311 predicted protein [Nematostella vectensi 0.885 0.421 0.553 3e-34
346465411 342 hypothetical protein [Amblyomma maculatu 0.891 0.385 0.541 2e-33
240849523 310 solute carrier family 25 member 35-like 0.966 0.461 0.506 4e-33
443694826 308 hypothetical protein CAPTEDRAFT_174650 [ 0.885 0.425 0.537 2e-32
91091348 299 PREDICTED: similar to predicted protein 0.891 0.441 0.533 3e-32
354469608 300 PREDICTED: solute carrier family 25 memb 0.891 0.44 0.548 9e-32
348560818 300 PREDICTED: solute carrier family 25 memb 0.891 0.44 0.533 9e-32
241844072212 secreted salivary gland peptide, putativ 0.891 0.622 0.556 9e-32
74222819 299 unnamed protein product [Mus musculus] 0.891 0.441 0.548 9e-32
>gi|427794597|gb|JAA62750.1| Putative mitochondrial fatty acid anion carrier protein/uncoupling protein, partial [Rhipicephalus pulchellus] Back     alignment and taxonomy information
 Score =  152 bits (383), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 74/133 (55%), Positives = 95/133 (71%), Gaps = 1/133 (0%)

Query: 1   MEFIMGGTAAAGAAFFTNPLDVVKVRFQLQGELKAKGLYAVHYKNLFHAFFQIAKHDGFL 60
           MEF++GG AA GA FFTNPL+VVK R QLQGEL+A+G Y VHY+N+FHAF+ I KHDG  
Sbjct: 16  MEFLLGGLAACGAGFFTNPLEVVKTRIQLQGELQARGHYTVHYRNVFHAFYAIGKHDGLR 75

Query: 61  ALQKGLMPAACHQVVLNGVRLGTYQVAEERGWTMGPDGNVYILNNIAVGLMAGGAGAFLG 120
           ALQ GL PA  +Q  +NG RLG Y + E+   T   +G+V +  +IA G +AG  GAF+G
Sbjct: 76  ALQSGLSPALWYQFFMNGTRLGAYHIMEDLQLTKNKNGSVNVARSIAAGAVAGCVGAFVG 135

Query: 121 SPI-LLKISLAIQ 132
           SP+ L+K+ L  Q
Sbjct: 136 SPLYLVKVQLQAQ 148

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|156379531|ref|XP_001631510.1| predicted protein [Nematostella vectensis] gi|156218552|gb|EDO39447.1| predicted protein [Nematostella vectensis] Back     alignment and taxonomy information
>gi|346465411|gb|AEO32550.1| hypothetical protein [Amblyomma maculatum] Back     alignment and taxonomy information
>gi|240849523|ref|NP_001155734.1| solute carrier family 25 member 35-like [Acyrthosiphon pisum] gi|239788828|dbj|BAH71075.1| ACYPI007990 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|443694826|gb|ELT95862.1| hypothetical protein CAPTEDRAFT_174650 [Capitella teleta] Back     alignment and taxonomy information
>gi|91091348|ref|XP_972245.1| PREDICTED: similar to predicted protein [Tribolium castaneum] gi|270014146|gb|EFA10594.1| hypothetical protein TcasGA2_TC012854 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|354469608|ref|XP_003497219.1| PREDICTED: solute carrier family 25 member 35-like [Cricetulus griseus] gi|344237763|gb|EGV93866.1| Solute carrier family 25 member 35 [Cricetulus griseus] Back     alignment and taxonomy information
>gi|348560818|ref|XP_003466210.1| PREDICTED: solute carrier family 25 member 35-like [Cavia porcellus] Back     alignment and taxonomy information
>gi|241844072|ref|XP_002415478.1| secreted salivary gland peptide, putative [Ixodes scapularis] gi|215509690|gb|EEC19143.1| secreted salivary gland peptide, putative [Ixodes scapularis] Back     alignment and taxonomy information
>gi|74222819|dbj|BAE42267.1| unnamed protein product [Mus musculus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query148
MGI|MGI:1919248 300 Slc25a35 "solute carrier famil 0.891 0.44 0.436 2.3e-23
UNIPROTKB|E2QRV5249 SLC25A35 "Uncharacterized prot 0.891 0.530 0.428 2.9e-23
UNIPROTKB|F1Q3F8 300 SLC25A35 "Uncharacterized prot 0.891 0.44 0.428 2.9e-23
UNIPROTKB|F6V5Y6 326 SLC25A35 "Uncharacterized prot 0.891 0.404 0.428 2.9e-23
RGD|1598229 300 Slc25a35 "solute carrier famil 0.891 0.44 0.428 7.8e-23
UNIPROTKB|G1K1W1 311 SLC25A35 "Solute carrier famil 0.891 0.424 0.413 2.1e-22
UNIPROTKB|Q58DS3249 SLC25A35 "Solute carrier famil 0.891 0.530 0.413 2.1e-22
ZFIN|ZDB-GENE-060526-142 298 slc25a35 "solute carrier famil 0.925 0.459 0.410 2.1e-22
UNIPROTKB|I3LRN4 318 SLC25A35 "Uncharacterized prot 0.891 0.415 0.413 2.6e-22
UNIPROTKB|Q3KQZ1 300 SLC25A35 "Solute carrier famil 0.891 0.44 0.421 5.5e-22
MGI|MGI:1919248 Slc25a35 "solute carrier family 25, member 35" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
 Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 58/133 (43%), Positives = 75/133 (56%)

Query:     1 MEFIMXXXXXXXXXXXXNPLDVVKVRFQLQGELKAKGLYAVHYKNLFHAFFQIAKHDGFL 60
             M+F+M            NPL+VVK R QLQGEL+A G Y  HY+N+FHAFF I K DG  
Sbjct:     1 MDFLMSGVAACGACVFTNPLEVVKTRMQLQGELQAPGTYQRHYRNVFHAFFTIGKVDGLA 60

Query:    61 ALQKGLMPAACHQVVLNGVRLGTYQVAEERGWTMGPDGNVYILNNIXXXXXXXXXXXXXX 120
             ALQKGL PA  +Q ++NG+RLGTY +AE RG+    +G    + +               
Sbjct:    61 ALQKGLGPALLYQFLMNGIRLGTYGLAESRGYLHTNEGTHSPVRSAAAGALAGVMGAYLG 120

Query:   121 SPI-LLKISLAIQ 132
             SPI ++K  L  Q
Sbjct:   121 SPIYMVKTHLQAQ 133
GO:0003674 "molecular_function" evidence=ND
GO:0005739 "mitochondrion" evidence=IDA
GO:0005743 "mitochondrial inner membrane" evidence=IEA
GO:0006810 "transport" evidence=IEA
GO:0008150 "biological_process" evidence=ND
GO:0016020 "membrane" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
UNIPROTKB|E2QRV5 SLC25A35 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q3F8 SLC25A35 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F6V5Y6 SLC25A35 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|1598229 Slc25a35 "solute carrier family 25, member 35" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|G1K1W1 SLC25A35 "Solute carrier family 25 member 35" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q58DS3 SLC25A35 "Solute carrier family 25 member 35" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060526-142 slc25a35 "solute carrier family 25, member 35" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|I3LRN4 SLC25A35 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q3KQZ1 SLC25A35 "Solute carrier family 25 member 35" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q58DS3S2535_BOVINNo assigned EC number0.52630.89180.5301yesN/A
A3KPP4S2535_DANRENo assigned EC number0.51790.92560.4597yesN/A
Q5SWT3S2535_MOUSENo assigned EC number0.54880.89180.44yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query148
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 5e-16
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information 
 Score = 68.4 bits (168), Expect = 5e-16
 Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 3  FIMGGTAAAGAAFFTNPLDVVKVRFQLQGELKAKGLYAVHYKNLFHAFFQIAKHDGFLAL 62
           + GG A A AA  T PLDVVK R Q      ++      YK +   F +I K +G   L
Sbjct: 9  LLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSR-----KYKGILDCFKKIYKEEGIRGL 63

Query: 63 QKGLMPAACHQVVLNGVRLGTY 84
           KGL+P          +  GTY
Sbjct: 64 YKGLLPNLLRVAPAAAIYFGTY 85

Length = 96

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 148
KOG0752|consensus320 100.0
KOG0762|consensus311 99.97
KOG0764|consensus 299 99.97
KOG0753|consensus317 99.97
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 99.97
PTZ00169 300 ADP/ATP transporter on adenylate translocase; Prov 99.96
KOG0757|consensus 319 99.96
KOG0757|consensus319 99.96
KOG0758|consensus 297 99.95
KOG0752|consensus 320 99.95
PTZ00168259 mitochondrial carrier protein; Provisional 99.95
KOG0759|consensus286 99.95
KOG0764|consensus299 99.95
KOG0753|consensus 317 99.95
KOG0754|consensus 294 99.95
KOG0768|consensus323 99.95
KOG0759|consensus 286 99.95
KOG0760|consensus302 99.94
KOG0760|consensus 302 99.94
PTZ00168 259 mitochondrial carrier protein; Provisional 99.93
KOG0762|consensus 311 99.93
KOG0758|consensus297 99.93
KOG0750|consensus304 99.93
KOG0761|consensus361 99.93
KOG0769|consensus 308 99.92
KOG0766|consensus297 99.92
KOG0751|consensus 694 99.92
KOG0765|consensus333 99.91
KOG0754|consensus294 99.91
KOG0770|consensus353 99.9
KOG0749|consensus298 99.9
KOG0756|consensus299 99.9
KOG0761|consensus 361 99.89
KOG0755|consensus 320 99.88
KOG0751|consensus 694 99.87
KOG0755|consensus320 99.87
KOG0770|consensus 353 99.87
KOG0036|consensus463 99.87
KOG0036|consensus 463 99.86
KOG0763|consensus301 99.85
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.85
KOG0767|consensus333 99.81
KOG0749|consensus 298 99.8
KOG0763|consensus 301 99.8
KOG0767|consensus 333 99.8
KOG0769|consensus308 99.74
KOG0765|consensus 333 99.72
KOG0756|consensus 299 99.69
KOG0750|consensus 304 99.67
KOG0768|consensus323 99.64
KOG2745|consensus321 99.55
KOG0766|consensus297 99.54
KOG1519|consensus 297 99.45
KOG1519|consensus297 99.38
KOG2954|consensus427 99.12
KOG2745|consensus 321 98.86
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 98.4
KOG2954|consensus 427 97.56
>KOG0752|consensus Back     alignment and domain information 
Probab=100.00  E-value=7.9e-34  Score=207.53  Aligned_cols=137  Identities=20%  Similarity=0.389  Sum_probs=121.2

Q ss_pred             CchHHHhHHHHhHHHhhccHHHHHHHHHhccccccccccccccCcHHHHHHHHHHhhcHhHhhccchHHHHHHHHhhhHH
Q psy1157           1 MEFIMGGTAAAGAAFFTNPLDVVKVRFQLQGELKAKGLYAVHYKNLFHAFFQIAKHDGFLALQKGLMPAACHQVVLNGVR   80 (148)
Q Consensus         1 ~~~~ag~~ag~~~~~~~~Pld~vk~~~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~yrG~~~~~~~~~~~~~~~   80 (148)
                      ++++||++||+++.+++||||++|+|+.+++.       ...|+++.+++++||++||++|||||+.|++++.+|+.++.
T Consensus       128 ~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~-------~~~y~~l~~a~~~I~~~eGi~gfYrGl~ptllgi~Pyag~~  200 (320)
T KOG0752|consen  128 VRLVAGALAGMTATLATYPLDLLRTRLAVQGE-------LKVYRGLLHAFKTIYREEGIRGFYRGLGPTLLGIAPYAGIN  200 (320)
T ss_pred             HHHHHHHHHHHHHHHhcCcHHHhhhheeeecc-------cccCCcHHHHHHHHHHhcchhhhhcCcchhhheehhhhhhH
Confidence            36899999999999999999999999999876       24799999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhcccc-CCCCChhHHHHHHHHHHHHHhHHHhcCcHH-HHHHHHhcCC-------CCcccccccc
Q psy1157          81 LGTYQVAEERGWTM-GPDGNVYILNNIAVGLMAGGAGAFLGSPIL-LKISLAIQRG-------HCSSIMSTLP  144 (148)
Q Consensus        81 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ag~~~~~~~~P~d-vk~r~q~~~~-------~~~~~~~~~~  144 (148)
                      |..||.+|++.+.. ..+++.+.+.++++|++||+++..++||+| +|.|||+.+-       .+++++||++
T Consensus       201 F~~Yd~lk~~~~~~~~~~~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~~~~~~~~~~~~~~~~~~~  273 (320)
T KOG0752|consen  201 FFAYDTLKKWQYLKSSGNKELSNFERLLCGALAGAVAQTITYPLDTVRRRMQLGGLKYFGGGFRYKGVLDAFR  273 (320)
T ss_pred             HHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhccCccccccccccccHHHHHH
Confidence            99999999941222 223566788999999999999999999999 9999999873       2567888875

>KOG0762|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query148
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 3e-05
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure 
Iteration: 1

 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 18  NPLDVVKVRFQLQGELKAKGLYAVHYKNLFHAFFQIAKHDGFLALQKGLMPAACHQVVLN 77
            P DVVKVRFQ Q   +A G     Y++   A+  IA+ +G   L KG  P      ++N
Sbjct: 123 QPTDVVKVRFQAQA--RAGG--GRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVN 178
Query: 78  GVRLGTYQVAEE 89
              L TY + ++
Sbjct: 179 CAELVTYDLIKD 190

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query148
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 2e-39
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-21
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-09
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 9e-14
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-13
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-12
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score =  133 bits (338), Expect = 2e-39
 Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 5/130 (3%)

Query: 1   MEFIMGGTAAAGAAFFTNPLDVVKVRFQLQGELKA--KGLYAVHYKNLFHAFFQIAKHDG 58
           ++F+  GTAA  A   T PLD  KVR Q+QGE +   +   +  Y+ +      + + +G
Sbjct: 3   VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEG 62

Query: 59  FLALQKGLMPAACHQVVLNGVRLGTYQVAEERGWTMGPDGNVYILNNIAVGLMAGGAGAF 118
             +L  GL+     Q+    VR+G Y     + +      +  I + +  G   G     
Sbjct: 63  PRSLYNGLVAGLQRQMSFASVRIGLYDSV--KQFYTKGSEHAGIGSRLLAGSTTGALAVA 120

Query: 119 LGSPI-LLKI 127
           +  P  ++K+
Sbjct: 121 VAQPTDVVKV 130
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query148
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 99.97
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 99.97
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 99.97
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 99.97
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=99.97  E-value=3.7e-31  Score=194.88  Aligned_cols=137  Identities=24%  Similarity=0.267  Sum_probs=120.6

Q ss_pred             chHHHhHHHHhHHHhhccHHHHHHHHHhccccccccccccccCcHHHHHHHHHHhhcHhHhhccchHHHHHHHHhhhHHH
Q psy1157           2 EFIMGGTAAAGAAFFTNPLDVVKVRFQLQGELKAKGLYAVHYKNLFHAFFQIAKHDGFLALQKGLMPAACHQVVLNGVRL   81 (148)
Q Consensus         2 ~~~ag~~ag~~~~~~~~Pld~vk~~~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~yrG~~~~~~~~~~~~~~~~   81 (148)
                      ++++|++||+++.++++|+|+||+|+|.+...    .....|+++++++++|+++||++|||||+.+++++.+++.+++|
T Consensus       107 ~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~----~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f  182 (303)
T 2lck_A          107 RLLAGSTTGALAVAVAQPTDVVKVRFQAQARA----GGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAEL  182 (303)
T ss_dssp             HHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSC----CCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCcHHHHHHHHhccccc----CCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHH
Confidence            47899999999999999999999999998642    12357899999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhccccCC-CCChhHHHHHHHHHHHHHhHHHhcCcHH-HHHHHHhcCC-CCcccccccc
Q psy1157          82 GTYQVAEERGWTMGP-DGNVYILNNIAVGLMAGGAGAFLGSPIL-LKISLAIQRG-HCSSIMSTLP  144 (148)
Q Consensus        82 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ag~~~~~~~~P~d-vk~r~q~~~~-~~~~~~~~~~  144 (148)
                      ..||.+|+  .+.+. ....+...++++|++||++++++++|+| +|+|||.+.. .|++++||++
T Consensus       183 ~~ye~~k~--~l~~~~~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~~~y~~~~~~~~  246 (303)
T 2lck_A          183 VTYDLIKD--TLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCAL  246 (303)
T ss_dssp             HHHHHHHH--TTTTTTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCSHHHHHH
T ss_pred             HHHHHHHH--HHHhccCCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccccccCCHHHHHH
Confidence            99999999  44432 2345567889999999999999999999 9999999864 5889988875
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 148
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-11
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 4e-05
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

 Score = 58.2 bits (139), Expect = 2e-11
 Identities = 24/117 (20%), Positives = 40/117 (34%), Gaps = 1/117 (0%)

Query: 2   EFIMGGTAAAGAAFFTNPLDVVKVRFQLQGELKAKGLYAVHYKNLFHAFFQIAKHDGFLA 61
           +F+ GG AAA +     P++ VK+  Q+Q   K        YK +     +I K  GFL+
Sbjct: 9   DFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQIS-AEKQYKGIIDCVVRIPKEQGFLS 67

Query: 62  LQKGLMPAACHQVVLNGVRLGTYQVAEERGWTMGPDGNVYILNNIAVGLMAGGAGAF 118
             +G +           +        ++           +           G AGA 
Sbjct: 68  FWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGAT 124
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query148
d1okca_ 292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.94
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.94
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

Probab=99.94  E-value=1.1e-26  Score=167.81  Aligned_cols=132  Identities=23%  Similarity=0.272  Sum_probs=111.9

Q ss_pred             chHHHhHHHHhHHHhhccHHHHHHHHHhccccccccccccccCcHHHHHHHHHHhhcHhHhhccchHHHHHHHHhhhHHH
Q psy1157           2 EFIMGGTAAAGAAFFTNPLDVVKVRFQLQGELKAKGLYAVHYKNLFHAFFQIAKHDGFLALQKGLMPAACHQVVLNGVRL   81 (148)
Q Consensus         2 ~~~ag~~ag~~~~~~~~Pld~vk~~~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~yrG~~~~~~~~~~~~~~~~   81 (148)
                      +++||++||+++.+++||||+||+|+|++..... ......|+++++++++++++||+++||+|+.+.+++..+...++|
T Consensus         9 ~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~-~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~   87 (292)
T d1okca_           9 DFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQ-ISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNF   87 (292)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSS-CCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCC-CCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcccchhH
Confidence            5899999999999999999999999999875322 234567899999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhccccCCCC---ChhHHHHHHHHHHHHHhHHHhcCcHH-HHHHHHhcCC
Q psy1157          82 GTYQVAEERGWTMGPDG---NVYILNNIAVGLMAGGAGAFLGSPIL-LKISLAIQRG  134 (148)
Q Consensus        82 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ag~~~~~~~~P~d-vk~r~q~~~~  134 (148)
                      ..|+.+++.+.......   ......++.+|..||+++.++++|+| +|+|||.+..
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~  144 (292)
T d1okca_          88 AFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVG  144 (292)
T ss_dssp             HHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeecccc
Confidence            99999998522222221   12345678899999999999999999 9999998753
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure