Psyllid ID: psy11662

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340------
MNNVIIQAKQEYWLNCFEESVNKFAERAIASQPHSTTGEERATKFREKYFAERAIASQPHSTTGEERATKFREKYVSRLHHLKQHPLLFCFDYDFSAYGNLTVRSLLDTIEHYLKEFDFPDPYLEFVKFETKYIADCLDFIAANLINSIECMDGKSIKATGGGAYKYANLIQEKLGLSPWLVDDLDDWLDRLNNGPPHSKAAIFVDNSGIDIVLGILPFARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQAGPCLDLSRLGRDLATELSSIDLIVLEGMGRTVHTNLNAKFTCESLKLAVIKNRWLAQRLGGQMFSVA
ccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHcccccHHcHHHHHHHHcccccccccHHHHHHHHcccccccEEEEEEccccHHHHHHcHHHHHHHHHcccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccccccccccccHHHHHHHHcccEEEEEcccccccccccccccccccHHHHHccHHHHHHHcccccccc
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEccHHHHHHHHHccccccEEEEEEccccHHHHHHHHHHHHHHHHcccEEEEEEcccccHcHccHHHHHHHHHHHHHHcHHHHHHHHcccEEEEEccccccEEEHHHccHHHHHHHHcccEEEEEccccHEHcccccEEEHcHEEEEEEccHHHHHHHcccEEEcc
MNNVIIQAKQEYWLNCFEESVNKFAERAiasqphsttgeeRATKFREKYFAEraiasqphsttgeeRATKFREKYVSRLhhlkqhpllfcfdydfsaygnlTVRSLLDTIEHYLkefdfpdpylefVKFETKYIADCLDFIAANLINSiecmdgksikatgggayKYANLIQEKlglspwlvdDLDDWldrlnngpphskaaifvdnsgidIVLGILPFARELLRRGTKVILcansapalndvtYSELVVLLRQAATVCHIIANALSSGRLVAMEtaqagpcldlsrlGRDLATELSSIDLIVLEgmgrtvhtnlnakfTCESLKLAVIKNRWLAQRlggqmfsva
MNNVIIQAKQEYWLNCFEESVNKFAERAiasqphsttgeeraTKFREKYFAeraiasqphsttgeeraTKFREKYVSRLHHLKQHPLLFCFDYDFSAYGNLTVRSLLDTIEHYLKEFDFPDPYLEFVKFETKYIADCLDFIAANLINSIECMDGKSIKATGGGAYKYANLIQEKLGLSPWLVDDLDDWLDRLNNGPPHSKAAIFVDNSGIDIVLGILPFARELLRRGTKVILCansapalndVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQAGPCLDLSRLGRDLATELSSIDLIVLEGMGRTVHTNLNAKFTCESLKLAVIKNRWLAqrlggqmfsva
MNNVIIQAKQEYWLNCFEESVNKFAERAIASQPHSTTGEERATKFREKYFAERAIASQPHSTTGEERATKFREKYVSRLHHLKQHPLLFCFDYDFSAYGNLTVRSLLDTIEHYLKEFDFPDPYLEFVKFETKYIADCLDFIAANLINSIECMDGKSIKATGGGAYKYANLIQEKLGlspwlvddlddwldrlNNGPPHSKAAIFVDNSGIDIVLGILPFARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQAGPCLDLSRLGRDLATELSSIDLIVLEGMGRTVHTNLNAKFTCESLKLAVIKNRWLAQRLGGQMFSVA
***VIIQAKQEYWLNCFEESVNKFA*********************************************FREKYVSRLHHLKQHPLLFCFDYDFSAYGNLTVRSLLDTIEHYLKEFDFPDPYLEFVKFETKYIADCLDFIAANLINSIECMDGKSIKATGGGAYKYANLIQEKLGLSPWLVDDLDDWLDRLNNGPPHSKAAIFVDNSGIDIVLGILPFARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQAGPCLDLSRLGRDLATELSSIDLIVLEGMGRTVHTNLNAKFTCESLKLAVIKNRWLAQRLGG******
*N*VIIQAKQEYWLNCFEESVNKFAERAIASQPHSTTGEERATKFREKYFAERAIAS****TTGEERATKFREKYVSRLHHLKQHPLLFCFDYDFSAYGNLTVRSLLDTIEHYLKEFDFPDPYLEFVKFETKYIADCLDFIAANLINSIECMDGKSIKATGGGAYKYANLIQEKLGLSPWLVDDLDDWLDRLNNGPPHSKAAIFVDNSGIDIVLGILPFARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQAGPCLDLSRLGRDLATELSSIDLIVLEGMGRTVHTNLNAKFTCESLKLAVIKNRWLAQRLGGQMFSVA
MNNVIIQAKQEYWLNCFEESVNKFAERAI************ATKFREKYFAERAIA************TKFREKYVSRLHHLKQHPLLFCFDYDFSAYGNLTVRSLLDTIEHYLKEFDFPDPYLEFVKFETKYIADCLDFIAANLINSIECMDGKSIKATGGGAYKYANLIQEKLGLSPWLVDDLDDWLDRLNNGPPHSKAAIFVDNSGIDIVLGILPFARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQAGPCLDLSRLGRDLATELSSIDLIVLEGMGRTVHTNLNAKFTCESLKLAVIKNRWLAQRLGGQMFSVA
*NNVIIQAKQEYWLNCFEESVNKFAERAIASQP****GEERATKFREKYFAERAIA***HSTTGEERATKFREKYVSRLHHLKQHPLLFCFDYDFSAYGNLTVRSLLDTIEHYLKEFDFPDPYLEFVKFETKYIADCLDFIAANLINSIECMDGKSIKATGGGAYKYANLIQEKLGLSPWLVDDLDDWLDRLNNGPPHSKAAIFVDNSGIDIVLGILPFARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQAGPCLDLSRLGRDLATELSSIDLIVLEGMGRTVHTNLNAKFTCESLKLAVIKNRWLAQRLGGQMFSVA
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MNNVIIQAKQEYWLNCFEESVNKFAERAIASQPHSTTGEERATKFREKYFAERAIASQPHSTTGEERATKFREKYVSRLHHLKQHPLLFCFDYDFSAYGNLTVRSLLDTIEHYLKEFDFPDPYLEFVKFETKYIADCLDFIAANLINSIECMDGKSIKATGGGAYKYANLIQEKLGLSPWLVDDLDDWLDRLNNGPPHSKAAIFVDNSGIDIVLGILPFARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQAGPCLDLSRLGRDLATELSSIDLIVLEGMGRTVHTNLNAKFTCESLKLAVIKNRWLAQRLGGQMFSVA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query346 2.2.26 [Sep-21-2011]
Q9NVE7773 Pantothenate kinase 4 OS= yes N/A 0.855 0.382 0.433 1e-71
Q923S8773 Pantothenate kinase 4 OS= yes N/A 0.864 0.386 0.436 3e-71
Q5R5F8773 Pantothenate kinase 4 OS= yes N/A 0.855 0.382 0.427 3e-71
Q4R4U1773 Pantothenate kinase 4 OS= N/A N/A 0.855 0.382 0.425 1e-70
Q80YV4820 Pantothenate kinase 4 OS= no N/A 0.864 0.364 0.386 4e-65
Q8L5Y9901 Pantothenate kinase 2 OS= yes N/A 0.855 0.328 0.336 4e-40
Q949P3367 Uncharacterized protein A no N/A 0.763 0.719 0.365 2e-35
O80765 383 Pantothenate kinase 1 OS= no N/A 0.156 0.140 0.475 1e-06
>sp|Q9NVE7|PANK4_HUMAN Pantothenate kinase 4 OS=Homo sapiens GN=PANK4 PE=1 SV=1 Back     alignment and function desciption
 Score =  270 bits (690), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 156/360 (43%), Positives = 204/360 (56%), Gaps = 64/360 (17%)

Query: 10  QEYWLNCFEESVNKFAERAIASQPHSTTGEERATKFREKYFAERAIASQPHSTTGEERAT 69
           ++YWL CFEE+++   +RA+ASQ                          P S    ERA 
Sbjct: 445 RKYWLTCFEEALDGVVKRAVASQ--------------------------PDSVDAAERAE 478

Query: 70  KFREKYVSRLHHLKQHPLLFCFDYDFSAYGNLTVRSLLDTIEHYLKEFDFPDPY------ 123
           KFR+KY ++L  L+Q P          AYG LTVRSLLDT EH L EF+FPDPY      
Sbjct: 479 KFRQKYWNKLQTLRQQPF---------AYGTLTVRSLLDTREHCLNEFNFPDPYSKVKQR 529

Query: 124 ---------------LEFVKFETKYIADCLDFIAANLINSIECMDGKSIKAT-GGGAYKY 167
                          L+ + +E + +A     +A N+ +       K++ A      Y  
Sbjct: 530 ENGVALRCFPGVVRSLDALGWEERQLALVKGLLAGNVFD----WGAKAVSAVLESDPYFG 585

Query: 168 ANLIQEKLGLSPWLVDDLDDWLDRLNNGPPHSKAAIFVDNSGIDIVLGILPFARELLRRG 227
               + KL   PWLVD   +WL RL  GPPH  A IF DNSGIDI+LG+ PF RELL RG
Sbjct: 586 FEEAKRKLQERPWLVDSYSEWLQRLK-GPPHKCALIFADNSGIDIILGVFPFVRELLLRG 644

Query: 228 TKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQAGPCLDLSR 287
           T+VIL  NS PALNDVT+SE +++  + A +  ++ +AL   RL+ ++T  + PCLDLSR
Sbjct: 645 TEVILACNSGPALNDVTHSESLIVAERIAGMDPVVHSALQEERLLLVQTGSSSPCLDLSR 704

Query: 288 LGRDLATEL--SSIDLIVLEGMGRTVHTNLNAKFTCESLKLAVIKNRWLAQRLGGQMFSV 345
           L + LA  +     DL+V+EGMGR VHTN +A   CESLKLAVIKN WLA+RLGG++FSV
Sbjct: 705 LDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKLAVIKNAWLAERLGGRLFSV 764
Plays a role in the physiological regulation of the intracellular CoA concentration.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 3EC: 3
>sp|Q923S8|PANK4_RAT Pantothenate kinase 4 OS=Rattus norvegicus GN=Pank4 PE=1 SV=1 Back     alignment and function description
>sp|Q5R5F8|PANK4_PONAB Pantothenate kinase 4 OS=Pongo abelii GN=PANK4 PE=2 SV=1 Back     alignment and function description
>sp|Q4R4U1|PANK4_MACFA Pantothenate kinase 4 OS=Macaca fascicularis GN=PANK4 PE=2 SV=2 Back     alignment and function description
>sp|Q80YV4|PANK4_MOUSE Pantothenate kinase 4 OS=Mus musculus GN=Pank4 PE=1 SV=2 Back     alignment and function description
>sp|Q8L5Y9|PANK2_ARATH Pantothenate kinase 2 OS=Arabidopsis thaliana GN=At4g32180 PE=1 SV=2 Back     alignment and function description
>sp|Q949P3|Y2734_ARATH Uncharacterized protein At2g17340 OS=Arabidopsis thaliana GN=At2g17340 PE=1 SV=1 Back     alignment and function description
>sp|O80765|PANK1_ARATH Pantothenate kinase 1 OS=Arabidopsis thaliana GN=COAA PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query346
380012482 784 PREDICTED: LOW QUALITY PROTEIN: pantothe 0.861 0.380 0.533 4e-94
340718435 790 PREDICTED: pantothenate kinase 4-like [B 0.861 0.377 0.536 6e-94
328781165 784 PREDICTED: pantothenate kinase 4 isoform 0.861 0.380 0.536 2e-93
350409898 790 PREDICTED: pantothenate kinase 4-like [B 0.861 0.377 0.536 1e-92
322788013 804 hypothetical protein SINV_11824 [Solenop 0.861 0.370 0.519 3e-91
307189384 781 Pantothenate kinase 4 [Camponotus florid 0.858 0.380 0.520 2e-90
383848865 1235 PREDICTED: pantothenate kinase 4-like [M 0.858 0.240 0.557 3e-90
332026243 808 Pantothenate kinase 4 [Acromyrmex echina 0.861 0.368 0.519 5e-90
328703062 761 PREDICTED: pantothenate kinase 4 [Acyrth 0.867 0.394 0.498 4e-89
345488440 826 PREDICTED: pantothenate kinase 4-like [N 0.858 0.359 0.501 3e-88
>gi|380012482|ref|XP_003690310.1| PREDICTED: LOW QUALITY PROTEIN: pantothenate kinase 4-like [Apis florea] Back     alignment and taxonomy information
 Score =  350 bits (899), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 191/358 (53%), Positives = 233/358 (65%), Gaps = 60/358 (16%)

Query: 10  QEYWLNCFEESVNKFAERAIASQPHSTTGEERATKFREKYFAERAIASQPHSTTGEERAT 69
           ++YWL CFEESV+KF  RA+ SQ                          PHS T ++RAT
Sbjct: 426 RDYWLQCFEESVDKFIARALHSQ--------------------------PHSPTAKDRAT 459

Query: 70  KFREKYVSRLHHLKQHPLLFCFDYDFSAYGNLTVRSLLDTIEHYLKEFDFPDPYLEFVKF 129
           K ++KYV RLH+L   P          AYG LTVR LLDTIEH +KEFDFPDPYL   K 
Sbjct: 460 KLKKKYVDRLHYLHLEPF---------AYGTLTVRVLLDTIEHCMKEFDFPDPYLFQKKK 510

Query: 130 ETKYIADCLDFIAANLINSIECMDGKSIKA------TGG----GAYKYANLI-------- 171
           E +   + L ++ + ++   +   G+ IKA      +G     GA   A L+        
Sbjct: 511 ENE---EALKYLKSRILTIDKLEQGEKIKALILGVLSGNMFDWGAQAVATLMETTDFGFA 567

Query: 172 --QEKLGLSPWLVDDLDDWLDRLNNGPPHSKAAIFVDNSGIDIVLGILPFARELLRRGTK 229
             Q K+   PWLVD+LDDW++RL  G PH  AAIFVDNSG+DI+LGILPFAR+LL RGTK
Sbjct: 568 EAQAKIPGRPWLVDNLDDWIERLETGIPHKCAAIFVDNSGVDIILGILPFARDLLLRGTK 627

Query: 230 VILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQAGPCLDLSRLG 289
           VILCANS PALNDVTYSELVV LR A+ +C +I +AL   RL+AMETAQAGPCLDLSRL 
Sbjct: 628 VILCANSMPALNDVTYSELVVTLRDASNICKVIRHALKENRLIAMETAQAGPCLDLSRLN 687

Query: 290 RDLATEL--SSIDLIVLEGMGRTVHTNLNAKFTCESLKLAVIKNRWLAQRLGGQMFSV 345
            DL   +   ++DLIVLEGMGRT+HTN +AK TCE LKLAV+KNRWLA+RLGG M++V
Sbjct: 688 LDLCLAMVKHNVDLIVLEGMGRTLHTNFHAKMTCECLKLAVVKNRWLARRLGGDMYAV 745

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|340718435|ref|XP_003397673.1| PREDICTED: pantothenate kinase 4-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|328781165|ref|XP_392546.4| PREDICTED: pantothenate kinase 4 isoform 1 [Apis mellifera] Back     alignment and taxonomy information
>gi|350409898|ref|XP_003488881.1| PREDICTED: pantothenate kinase 4-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|322788013|gb|EFZ13854.1| hypothetical protein SINV_11824 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|307189384|gb|EFN73794.1| Pantothenate kinase 4 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|383848865|ref|XP_003700068.1| PREDICTED: pantothenate kinase 4-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|332026243|gb|EGI66382.1| Pantothenate kinase 4 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|328703062|ref|XP_001952497.2| PREDICTED: pantothenate kinase 4 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|345488440|ref|XP_003425909.1| PREDICTED: pantothenate kinase 4-like [Nasonia vitripennis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query346
UNIPROTKB|F1MLD0773 PANK4 "Uncharacterized protein 0.436 0.195 0.588 3.8e-60
UNIPROTKB|E9PHT6734 PANK4 "Pantothenate kinase 4" 0.436 0.205 0.581 4.2e-60
UNIPROTKB|I3LPY8780 PANK4 "Uncharacterized protein 0.436 0.193 0.581 4.2e-60
RGD|628857773 Pank4 "pantothenate kinase 4" 0.436 0.195 0.594 5.5e-60
UNIPROTKB|Q9NVE7773 PANK4 "Pantothenate kinase 4" 0.436 0.195 0.581 7.3e-60
UNIPROTKB|E1BV98771 PANK4 "Uncharacterized protein 0.436 0.195 0.575 7.4e-60
UNIPROTKB|E2QXZ0773 PANK4 "Uncharacterized protein 0.436 0.195 0.581 1.5e-59
MGI|MGI:2387466820 Pank4 "pantothenate kinase 4" 0.265 0.112 0.586 1.1e-57
ZFIN|ZDB-GENE-040426-1592774 pank4 "pantothenate kinase 4" 0.436 0.195 0.575 5.5e-57
WB|WBGene00006862755 pnk-4 [Caenorhabditis elegans 0.427 0.196 0.513 1.8e-43
UNIPROTKB|F1MLD0 PANK4 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
 Score = 463 (168.0 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
 Identities = 90/153 (58%), Positives = 113/153 (73%)

Query:   195 GPPHSKAAIFVDNSGIDIVLGILPFARELLRRGTKVILCANSAPALNDVTYSELVVLLRQ 254
             GPPH  A IF DNSG+D++LG+ PF RELL RGT+VIL  NS PALNDVTYSE +++  +
Sbjct:   612 GPPHKCALIFADNSGVDVILGVFPFVRELLSRGTEVILACNSGPALNDVTYSESLIVAER 671

Query:   255 AATVCHIIANALSSGRLVAMETAQAGPCLDLSRLGRDLATELSS--IDLIVLEGMGRTVH 312
              A +  +I +AL   RL+ ++T  + PCLDLSRL + LA  +     DL+V+EGMGR VH
Sbjct:   672 IAAMDPVIHSALREERLLLVQTGSSSPCLDLSRLDKGLAVLVRERGADLVVIEGMGRAVH 731

Query:   313 TNLNAKFTCESLKLAVIKNRWLAQRLGGQMFSV 345
             TN +A   CESLKLAVIKN WLA+RLGGQ+FSV
Sbjct:   732 TNYHAALCCESLKLAVIKNSWLAERLGGQLFSV 764
GO:0005737 "cytoplasm" evidence=IEA
GO:0015937 "coenzyme A biosynthetic process" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0004594 "pantothenate kinase activity" evidence=IEA
UNIPROTKB|E9PHT6 PANK4 "Pantothenate kinase 4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|I3LPY8 PANK4 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|628857 Pank4 "pantothenate kinase 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NVE7 PANK4 "Pantothenate kinase 4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BV98 PANK4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E2QXZ0 PANK4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:2387466 Pank4 "pantothenate kinase 4" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1592 pank4 "pantothenate kinase 4" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
WB|WBGene00006862 pnk-4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query346
PLN02902876 PLN02902, PLN02902, pantothenate kinase 3e-57
pfam01937315 pfam01937, DUF89, Protein of unknown function DUF8 2e-39
PLN02920 398 PLN02920, PLN02920, pantothenate kinase 1 2e-11
pfam03630329 pfam03630, Fumble, Fumble 8e-10
PLN02902 876 PLN02902, PLN02902, pantothenate kinase 1e-09
TIGR00555296 TIGR00555, panK_eukar, pantothenate kinase, eukary 2e-05
PTZ00297 1452 PTZ00297, PTZ00297, pantothenate kinase; Provision 6e-05
COG5146342 COG5146, PanK, Pantothenate kinase, acetyl-CoA reg 2e-04
>gnl|CDD|215489 PLN02902, PLN02902, pantothenate kinase Back     alignment and domain information 
 Score =  198 bits (506), Expect = 3e-57
 Identities = 126/376 (33%), Positives = 181/376 (48%), Gaps = 79/376 (21%)

Query: 7   QAKQEYWLNCFEESVNKFAERAIASQPHSTTGEERATKFREKYFAERAIASQPHSTTGEE 66
           Q+++EYW     E +    ++A+AS+     G + A +                      
Sbjct: 519 QSEREYWFKVLSEHLPDLVDKAVASE----GGTDDAKR---------------------- 552

Query: 67  RATKFREKYVSRLHHLKQHPLLFCFDYDFSAYGNLTVRSLLDTIEHYLKEFDFPDPYLEF 126
           R   F   + + L  L + P         +AYG L + +LL+  E  L+EF F D Y   
Sbjct: 553 RGDAFARAFSAHLARLMEEP---------AAYGKLGLANLLELREECLREFHFVDAYRSI 603

Query: 127 VKFETK-YIADCLDFIA--------ANLINSIECMDGKSIKATGGGA----YKYANLIQ- 172
            + E +  +A   D +A          L+  IE +   +I   G  A    Y    +I+ 
Sbjct: 604 KQRENEASLAVLPDLLAELDSMTEETRLLTLIEGVLAANIFDWGSRACVELYHKGTIIEI 663

Query: 173 ----EKLGLSPWLVDDLDDWLDRLNNGP-----PHSKAAIFVDNSGIDIVLGILPFAREL 223
                     PW VDD D + +R+         PH +A +FVDNSG D+VLG+LP AREL
Sbjct: 664 YRMSRNKMQRPWRVDDFDAFKERMLGSGGKKPKPHKRALLFVDNSGADVVLGMLPLAREL 723

Query: 224 LRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSG-------------- 269
           LRRGT+V+L ANS PALNDVT  EL  ++ +AA  C I+  A  +G              
Sbjct: 724 LRRGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMVNTDDGS 783

Query: 270 -------RLVAMETAQAGPCLDLSRLGRDLATELSSIDLIVLEGMGRTVHTNLNAKFTCE 322
                   L+ +E     PC+DL ++  +LA      DLIVLEGMGR +HTN NA+F CE
Sbjct: 784 KDDSTSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIVLEGMGRALHTNFNARFKCE 843

Query: 323 SLKLAVIKNRWLAQRL 338
           +LKLA++KN+ LA++L
Sbjct: 844 ALKLAMVKNQRLAEKL 859

Length = 876
>gnl|CDD|216798 pfam01937, DUF89, Protein of unknown function DUF89 Back     alignment and domain information
>gnl|CDD|215498 PLN02920, PLN02920, pantothenate kinase 1 Back     alignment and domain information
>gnl|CDD|217646 pfam03630, Fumble, Fumble Back     alignment and domain information
>gnl|CDD|215489 PLN02902, PLN02902, pantothenate kinase Back     alignment and domain information
>gnl|CDD|233021 TIGR00555, panK_eukar, pantothenate kinase, eukaryotic/staphyloccocal type Back     alignment and domain information
>gnl|CDD|140318 PTZ00297, PTZ00297, pantothenate kinase; Provisional Back     alignment and domain information
>gnl|CDD|227475 COG5146, PanK, Pantothenate kinase, acetyl-CoA regulated [Coenzyme metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 346
KOG4584|consensus348 100.0
PLN02902876 pantothenate kinase 100.0
COG1578285 Uncharacterized conserved protein [Function unknow 100.0
PF01937355 DUF89: Protein of unknown function DUF89; InterPro 100.0
KOG2201|consensus371 99.86
PLN02920 398 pantothenate kinase 1 99.74
PLN02902 876 pantothenate kinase 99.71
COG5146342 PanK Pantothenate kinase, acetyl-CoA regulated [Co 99.68
PF03630341 Fumble: Fumble ; InterPro: IPR004567 Pantothenate 99.66
PTZ00297 1452 pantothenate kinase; Provisional 99.61
TIGR00555279 panK_eukar pantothenate kinase, eukaryotic/staphyl 99.38
PRK13317277 pantothenate kinase; Provisional 97.99
KOG3870|consensus434 97.62
>KOG4584|consensus Back     alignment and domain information 
Probab=100.00  E-value=6.5e-89  Score=643.84  Aligned_cols=300  Identities=47%  Similarity=0.806  Sum_probs=286.6

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHhhcCCCCCchhhhhhhHHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHHHHhhhcCC
Q psy11662          7 QAKQEYWLNCFEESVNKFAERAIASQPHSTTGEERATKFREKYFAERAIASQPHSTTGEERATKFREKYVSRLHHLKQHP   86 (346)
Q Consensus         7 ~~~~~~w~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ra~~f~~~~~~~L~~l~~~p   86 (346)
                      ..++.|||+||+++||+|+++|++||++++|                          |++||++|+++|.++|++++++|
T Consensus        24 ~~a~~~Wi~~f~~~ip~f~krA~asq~~~~D--------------------------A~~RAe~F~~~y~~~Le~lk~~P   77 (348)
T KOG4584|consen   24 TPAEIYWINVFSNSIPSFKKRAEASQENVPD--------------------------APARAEKFAQRYAGILEDLKKDP   77 (348)
T ss_pred             chhhhHHHHHHHHHhHHHHHHHhhcCCCCCc--------------------------hhHHHHHHHHHHHHHHHHHHhCh
Confidence            4689999999999999999999999999999                          99999999999999999999999


Q ss_pred             ccccccCCcCCCCCch-hhhHHHHHHHHhhhcCCCCcchHHhhHhhHHHHHHHHHHHHhHhhhhccCCchh--hhhh---
Q psy11662         87 LLFCFDYDFSAYGNLT-VRSLLDTIEHYLKEFDFPDPYLEFVKFETKYIADCLDFIAANLINSIECMDGKS--IKAT---  160 (346)
Q Consensus        87 ~~~~~~~~~~~~g~~~-~r~ll~~re~~lr~~g~~Dpy~~~K~~eN~~Al~~l~~lr~~v~~~ld~l~~~~--~~at---  160 (346)
                      .         +||.++ .+.||++||+|||++||+|||+++|+.||+.|++++    |.+++++|++.|+.  +.++   
T Consensus        78 ~---------a~G~~~~g~~Ll~lRE~~LrE~gF~Diy~kvK~~ENa~Aia~f----P~vv~~lDal~dE~~Rle~LvrG  144 (348)
T KOG4584|consen   78 E---------AYGGPPLGINLLRLREQILRELGFRDIYKKVKDEENAKAIALF----PQVVRLLDALEDEGTRLENLVRG  144 (348)
T ss_pred             H---------hcCCCcchHHHHHHHHHHHHHhCCccHHHHHHHhhhhhHHHHh----HHHHHHHhhhcchhHHHHHHHHH
Confidence            9         999643 355999999999999999999999999999999999    88888899998652  3333   


Q ss_pred             -------cCChhhhHHHHH-----------HHhcCCCCccccHHHHHHHhcCCCCCceEEEEecCCCcceecCchHHHHH
Q psy11662        161 -------GGGAYKYANLIQ-----------EKLGLSPWLVDDLDDWLDRLNNGPPHSKAAIFVDNSGIDIVLGILPFARE  222 (346)
Q Consensus       161 -------D~GA~~~~dl~~-----------~~l~~r~~~vDd~d~l~~~l~~~~~~k~vl~f~DNsGeDIV~d~lPflre  222 (346)
                             ||||..+.++++           +++..|||.+||+|+|.++|+ ++||||+++|+||||.|||+|++||+|+
T Consensus       145 ilAGNiFDwGa~~~~~il~~~~~f~f~~a~~~l~~RPWl~D~ld~f~~r~~-~~p~K~~lif~DNSG~DvILGilPf~Re  223 (348)
T KOG4584|consen  145 ILAGNIFDWGAKAVVKILESASVFGFLAALQNLESRPWLVDDLDSFLARLK-GKPHKCALIFVDNSGFDVILGILPFARE  223 (348)
T ss_pred             HHhcchhhhHHHHHHHHHhccccchHHHHHhhhhcCCeeeccHHHHHHHhc-CCCcceEEEEecCCCcceeeeecHHHHH
Confidence                   999999988875           778899999999999999999 8899999999999999999999999999


Q ss_pred             HHhCCCeEEEEEecccccchhhHHHHHHHHHHHhhHHHHHHHhhcCCceEEEecCCCCcccCccccCHHHHHHHhcCCEE
Q psy11662        223 LLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQAGPCLDLSRLGRDLATELSSIDLI  302 (346)
Q Consensus       223 Ll~~Gs~V~l~v~s~P~LNDvT~~eL~~llt~~~~~d~~l~~A~~~~~l~vv~sG~~~pg~dl~~~s~el~~~~~~aDLV  302 (346)
                      |+++|++|++++|++|+|||+|+.|+..++.+++..|+.+..|++.+++.++.||+++||+|++++|+|++.+.++||||
T Consensus       224 llr~gt~vil~ans~palNdvt~~el~~l~~~~~~~~~~l~~~~~~~~ll~~~~G~~~pciDlrrvsqeLa~l~~daDLV  303 (348)
T KOG4584|consen  224 LLRRGTEVILCANSSPALNDVTYSELKELAAELANDCNVLLKAIDTGQLLVVQNGQDSPCIDLRRVSQELAYLSSDADLV  303 (348)
T ss_pred             HHhCCCeEEEEecCcchhccccHHHHHHHHHhhccCChHHHHHhhhcceEEeecCCCCceeeHHhhhHHHHHHhcCCCEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeccCCccccccccccccccchhhhhcCHHHHHHhCCccCcCC
Q psy11662        303 VLEGMGRTVHTNLNAKFTCESLKLAVIKNRWLAQRLGGQMFSVA  346 (346)
Q Consensus       303 IskGMGral~tN~~a~f~~~~lkLa~iK~~~vA~~Lg~~~~~~v  346 (346)
                      |+|||||++|||+|++|+|+|||+|||||.|||++|||+|||||
T Consensus       304 ViEGMGRalhTN~~aqf~CeSLK~avik~~wlA~~LGgrlf~vV  347 (348)
T KOG4584|consen  304 VIEGMGRALHTNLNAQFKCESLKLAVIKNLWLAERLGGRLFSVV  347 (348)
T ss_pred             EEeccchhhhhhhhhhhcccHhHHHHHhhHHHHHHhCCchheec
Confidence            99999999999999999999999999999999999999999997

>PLN02902 pantothenate kinase Back     alignment and domain information
>COG1578 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF01937 DUF89: Protein of unknown function DUF89; InterPro: IPR002791 This entry contains uncharacterised proteins Back     alignment and domain information
>KOG2201|consensus Back     alignment and domain information
>PLN02920 pantothenate kinase 1 Back     alignment and domain information
>PLN02902 pantothenate kinase Back     alignment and domain information
>COG5146 PanK Pantothenate kinase, acetyl-CoA regulated [Coenzyme metabolism] Back     alignment and domain information
>PF03630 Fumble: Fumble ; InterPro: IPR004567 Pantothenate kinase (PanK or CoaA) catalyses the first step of the universal five step coenzyme A (CoA) biosynthesis pathway Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type Back     alignment and domain information
>PRK13317 pantothenate kinase; Provisional Back     alignment and domain information
>KOG3870|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query346
1xfi_A367 X-Ray Structure Of Gene Product From Arabidopsis Th 2e-32
>pdb|1XFI|A Chain A, X-Ray Structure Of Gene Product From Arabidopsis Thaliana At2g17340 Length = 367 Back     alignment and structure 
Iteration: 1

 Score =  136 bits (342), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 69/144 (47%), Positives = 100/144 (69%), Gaps = 1/144 (0%)
Query: 200 KAAIFVDNSGIDIVLGILPFARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVC 259
           KA IFVDNSG DI+LGILPFARELLRRG +V+L AN  P++ND+T +EL  +L Q     
Sbjct: 214 KAVIFVDNSGADIILGILPFARELLRRGAQVVLAANELPSINDITCTELTEILSQLKDEN 273
Query: 260 HIIANALSSGRLVAMETAQAGPCLDLSRLGRDLATELSSIDLIVLEGMGRTVHTNLNAKF 319
             +    +S  L+A  +    P +DLSR+ ++LA   S  DL+++EGMGR + TNL A+F
Sbjct: 274 GQLLGVDTSKLLIA-NSGNDLPVIDLSRVSQELAYLSSDADLVIVEGMGRGIETNLYAQF 332
Query: 320 TCESLKLAVIKNRWLAQRLGGQMF 343
            C+SLK+ ++K+  +A+ LGG+++
Sbjct: 333 KCDSLKIGMVKHLEVAEFLGGRLY 356

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query346
1xfi_A367 Unknown protein; structural genomics, protein stru 6e-76
2g8l_A299 287AA long hypothetical protein; structural genomi 4e-32
2ffj_A300 Conserved hypothetical protein; structural genomic 3e-30
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
2i7n_A360 Pantothenate kinase 1; PANK, transferase; HET: ACO 3e-08
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A Length = 367 Back     alignment and structure
 Score =  237 bits (605), Expect = 6e-76
 Identities = 102/355 (28%), Positives = 159/355 (44%), Gaps = 59/355 (16%)

Query: 11  EYWLNCFEESVNKFAERAIASQPHSTTGEERATKFREKYFAERAIASQPHSTTGEERATK 70
             W+N F  S+  F +RA                            S         RA K
Sbjct: 43  ISWINVFANSIPSFKKRAE---------------------------SDITVPDAPARAEK 75

Query: 71  FREKYVSRLHHLKQHPLLFCFDYDFSAYGNLTVRSLLDTI-EHYLKEFDFPDPYLEFVKF 129
           F E+Y   L  LK+ P          ++G      LL  + E  L+E  F D + +    
Sbjct: 76  FAERYAGILEDLKKDP---------ESHGGPPDGILLCRLREQVLRELGFRDIFKKVKDE 126

Query: 130 ETKYIADCLDFIAANLI-------------------NSIECMDGKSIKATGGGAYKYANL 170
           E          + +                      N  +    +  +        +   
Sbjct: 127 ENAKAISLFPQVVSLSDAIEDDGKRLENLVRGIFAGNIFDLGSAQLAEVFSRDGMSFLAS 186

Query: 171 IQEKLGLSPWLVDDLDDWLDRLNNGPPHSKAAIFVDNSGIDIVLGILPFARELLRRGTKV 230
            Q  +   PW++DDL+++  +  N     KA IFVDNSG DI+LGILPFARELLRRG +V
Sbjct: 187 CQNLVP-RPWVIDDLENFQAKWIN-KSWKKAVIFVDNSGADIILGILPFARELLRRGAQV 244

Query: 231 ILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQAGPCLDLSRLGR 290
           +L AN  P++ND+T +EL  +L Q       +   + + +L+   +    P +DLSR+ +
Sbjct: 245 VLAANELPSINDITCTELTEILSQLKDENGQLL-GVDTSKLLIANSGNDLPVIDLSRVSQ 303

Query: 291 DLATELSSIDLIVLEGMGRTVHTNLNAKFTCESLKLAVIKNRWLAQRLGGQMFSV 345
           +LA   S  DL+++EGMGR + TNL A+F C+SLK+ ++K+  +A+ LGG+++  
Sbjct: 304 ELAYLSSDADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDC 358
>2g8l_A 287AA long hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.04A {Pyrococcus horikoshii} SCOP: e.50.1.1 Length = 299 Back     alignment and structure
>2ffj_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.45A {Archaeoglobus fulgidus} SCOP: e.50.1.1 Length = 300 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* Length = 360 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query346
1xfi_A367 Unknown protein; structural genomics, protein stru 100.0
2g8l_A299 287AA long hypothetical protein; structural genomi 100.0
2ffj_A300 Conserved hypothetical protein; structural genomic 100.0
2i7n_A360 Pantothenate kinase 1; PANK, transferase; HET: ACO 99.35
3pt1_A471 UPF0364 protein YMR027W; alpha/beta fold, carbohyd 99.27
2ews_A287 Pantothenate kinase; PANK, structural genomics, st 97.44
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A Back     alignment and structure
Probab=100.00  E-value=9.4e-66  Score=507.47  Aligned_cols=297  Identities=34%  Similarity=0.561  Sum_probs=258.0

Q ss_pred             HHHHHHHHHHHhhHHHHHHHHhhcCCCCCchhhhhhhHHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHHHHhhhcCCc
Q psy11662          8 AKQEYWLNCFEESVNKFAERAIASQPHSTTGEERATKFREKYFAERAIASQPHSTTGEERATKFREKYVSRLHHLKQHPL   87 (346)
Q Consensus         8 ~~~~~w~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ra~~f~~~~~~~L~~l~~~p~   87 (346)
                      ++|+|||+||+++|++|+++|++| |++++                          |++||++|+++|.++|++|+++|.
T Consensus        40 ~~~~~w~~~~~~~~~~~~~~a~~~-~~~~~--------------------------a~~ra~~f~~~~~~~l~~l~~~p~   92 (367)
T 1xfi_A           40 PNEISWINVFANSIPSFKKRAESD-ITVPD--------------------------APARAEKFAERYAGILEDLKKDPE   92 (367)
T ss_dssp             HHHHHHHHHHHTTHHHHHHHHHTC-TTSTT--------------------------HHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHHhhHHHHHHhccC-CCCcc--------------------------HHHHHHHHHHHHHHHHHHHhhCcc
Confidence            899999999999999999999988 88888                          999999999999999999999999


Q ss_pred             cccccCCcCCCCC-chhhhHHHHHHHHhhhcCCCCcchHHhhHhhHHHHHHHHHHHHhHhhhhccCC---ch----h---
Q psy11662         88 LFCFDYDFSAYGN-LTVRSLLDTIEHYLKEFDFPDPYLEFVKFETKYIADCLDFIAANLINSIECMD---GK----S---  156 (346)
Q Consensus        88 ~~~~~~~~~~~g~-~~~r~ll~~re~~lr~~g~~Dpy~~~K~~eN~~Al~~l~~lr~~v~~~ld~l~---~~----~---  156 (346)
                               +||. +++|.++++++++++.+|+.|||.++|+.+|+.|+++++.++..    ++.++   +.    .   
T Consensus        93 ---------~~g~~~~~r~~~~~~~~il~~~g~~DPf~~~K~~~n~~al~~l~~l~~~----l~~~~~~~~~l~~llr~a  159 (367)
T 1xfi_A           93 ---------SHGGPPDGILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSL----SDAIEDDGKRLENLVRGI  159 (367)
T ss_dssp             ---------GGGCSCCHHHHHHHHHHHHHHTTCSCTTHHHHHHHHHHHHHHHHHHHHH----HHTCCSHHHHHHHHHHHH
T ss_pred             ---------ccCCcchHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHH----HHhcccchHHHHHHHHHH
Confidence                     9999 89999999999999999999999999999999999999666554    33321   11    1   


Q ss_pred             -hhhh-cCChhhhHHH-------HH---HHhcCCCCccccHHHHHHHhcCCCCCceEEEEecCCCcceecCchHHHHHHH
Q psy11662        157 -IKAT-GGGAYKYANL-------IQ---EKLGLSPWLVDDLDDWLDRLNNGPPHSKAAIFVDNSGIDIVLGILPFARELL  224 (346)
Q Consensus       157 -~~at-D~GA~~~~dl-------~~---~~l~~r~~~vDd~d~l~~~l~~~~~~k~vl~f~DNsGeDIV~d~lPflreLl  224 (346)
                       +++. |||+....++       ++   +++..++|.+||++.|.+.++ +.++++|+||+||||+++|+|++||+++|+
T Consensus       160 l~GN~~Dlg~~~~~~~~~~~~~~~~~~~~~~~~~~~lvdd~~~l~~~L~-~~~~k~Vl~v~DNAG~Eiv~D~L~La~~Ll  238 (367)
T 1xfi_A          160 FAGNIFDLGSAQLAEVFSRDGMSFLASCQNLVPRPWVIDDLENFQAKWI-NKSWKKAVIFVDNSGADIILGILPFARELL  238 (367)
T ss_dssp             HHHHHC---------------CCHHHHTTCSCCSSCSEECHHHHHHHHT-TTCCCEEEEECCBTTHHHHHTHHHHHHHHH
T ss_pred             HHHhccccccccccccccccCCCHHHHHHHhhccCCCcCCHHHHHHHhc-ccCCCEEEEEecCCCchhhccHHHHHHHHH
Confidence             3332 9998653221       12   344578999999999999998 556799999999999779999999999999


Q ss_pred             hCCCeEEEEEecccccchhhHHHHHHHHHHHhhHHHHHHHhhcCCceEEEecCCCCcccCccccCHHHHHHHhcCCEEEE
Q psy11662        225 RRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQAGPCLDLSRLGRDLATELSSIDLIVL  304 (346)
Q Consensus       225 ~~Gs~V~l~v~s~P~LNDvT~~eL~~llt~~~~~d~~l~~A~~~~~l~vv~sG~~~pg~dl~~~s~el~~~~~~aDLVIs  304 (346)
                      ++|++|++++|++|+|||+|++|+..+|..+++-++.| .+++++++.|+++|+.+||++|.++|++|.+++.+|||||+
T Consensus       239 ~~g~kVvl~vK~~P~vnDvT~~D~~~~L~~l~~~~~~L-~~l~~g~l~vi~~G~~~~~~~l~~~s~el~~~l~~ADLVI~  317 (367)
T 1xfi_A          239 RRGAQVVLAANELPSINDITCTELTEILSQLKDENGQL-LGVDTSKLLIANSGNDLPVIDLSRVSQELAYLSSDADLVIV  317 (367)
T ss_dssp             HTTCEEEEEEBSSCCTTBCBHHHHHHHHHHHC--CCEE-TTEECTTEEEEECCCCSSSCCTTSBCHHHHHHHTTCSEEEE
T ss_pred             HcCCEEEEEECCcCceeeCCHHHHHHHHHHHHhcchhh-hhhccCcEEEEcCCCCCCCcChHHCCHHHHHHHccCCEEEE
Confidence            99999999999999999999999999988774433334 46689999999999999999999999999999999999999


Q ss_pred             eccCCccccccccccccccchhhhhcCHHHHHHhCCccCcCC
Q psy11662        305 EGMGRTVHTNLNAKFTCESLKLAVIKNRWLAQRLGGQMFSVA  346 (346)
Q Consensus       305 kGMGral~tN~~a~f~~~~lkLa~iK~~~vA~~Lg~~~~~~v  346 (346)
                      |||||.+|||+++.|.|+.++|+|+||+|||++||+++||||
T Consensus       318 KG~gNyl~t~~~~~f~~~i~~L~~iKc~~vA~~lg~~~~~~V  359 (367)
T 1xfi_A          318 EGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCV  359 (367)
T ss_dssp             ESHHHHTTBSTTCCCSSEEEEEEECCCHHHHHHHTCCTTCEE
T ss_pred             ECCCCCCccchhhhcCcchhHHHhhCcHHHHHHhCCCcCCEE
Confidence            999999999999999999999999999999999999999986
>2g8l_A 287AA long hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.04A {Pyrococcus horikoshii} SCOP: e.50.1.1 Back     alignment and structure
>2ffj_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.45A {Archaeoglobus fulgidus} SCOP: e.50.1.1 Back     alignment and structure
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* Back     alignment and structure
>3pt1_A UPF0364 protein YMR027W; alpha/beta fold, carbohydrate phosphatase, F6P binding, HYDR; HET: F6P; 1.77A {Saccharomyces cerevisiae} Back     alignment and structure
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 346
d1xfia_360 e.50.1.1 (A:) Hypothetical protein At2g17340 {Thal 4e-90
d2ffja1282 e.50.1.1 (A:7-288) Hypothetical protein AF1104 {Ar 7e-26
d2g8la1284 e.50.1.1 (A:1-284) Hypothetical protein PH1575 {Py 1e-25
d2i7na1146 c.55.1.14 (A:236-381) Pantothenate kinase 1, PANK1 4e-15
>d1xfia_ e.50.1.1 (A:) Hypothetical protein At2g17340 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 360 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: AF1104-like
superfamily: AF1104-like
family: AF1104-like
domain: Hypothetical protein At2g17340
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  272 bits (696), Expect = 4e-90
 Identities = 103/361 (28%), Positives = 159/361 (44%), Gaps = 65/361 (18%)

Query: 8   AKQEYWLNCFEESVNKFAERAIASQPHSTTGEERATKFREKYFAERAIASQPHSTTGEER 67
             +  W+N F  S+  F +RA                            S         R
Sbjct: 35  PNEISWINVFANSIPSFKKRA---------------------------ESDITVPDAPAR 67

Query: 68  ATKFREKYVSRLHHLKQHPLLFCFDYDFSAYGNLTVRSLL-DTIEHYLKEFDFPDPYLEF 126
           A KF E+Y   L  LK+ P          ++G      LL    E  L+E  F D + + 
Sbjct: 68  AEKFAERYAGILEDLKKDP---------ESHGGPPDGILLCRLREQVLRELGFRDIFKKV 118

Query: 127 VKFET----KYIADCLDFI------------------AANLINSIECMDGKSIKATGGGA 164
              E           +                     A N+ +       +     G   
Sbjct: 119 KDEENAKAISLFPQVVSLSDAIEDDGKRLENLVRGIFAGNIFDLGSAQLAEVFSRDGMSF 178

Query: 165 YKYANLIQEKLGLSPWLVDDLDDWLDRLNNGPPHSKAAIFVDNSGIDIVLGILPFARELL 224
                 +  +    PW++DDL+++  +  N     KA IFVDNSG DI+LGILPFARELL
Sbjct: 179 LASCQNLVPR----PWVIDDLENFQAKWIN-KSWKKAVIFVDNSGADIILGILPFARELL 233

Query: 225 RRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQAGPCLD 284
           RRG +V+L AN  P++ND+T +EL  +L Q       +   + + +L+   +    P +D
Sbjct: 234 RRGAQVVLAANELPSINDITCTELTEILSQLKDENGQLL-GVDTSKLLIANSGNDLPVID 292

Query: 285 LSRLGRDLATELSSIDLIVLEGMGRTVHTNLNAKFTCESLKLAVIKNRWLAQRLGGQMFS 344
           LSR+ ++LA   S  DL+++EGMGR + TNL A+F C+SLK+ ++K+  +A+ LGG+++ 
Sbjct: 293 LSRVSQELAYLSSDADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYD 352

Query: 345 V 345
            
Sbjct: 353 C 353
>d2ffja1 e.50.1.1 (A:7-288) Hypothetical protein AF1104 {Archaeoglobus fulgidus [TaxId: 2234]} Length = 282 Back     information, alignment and structure
>d2g8la1 e.50.1.1 (A:1-284) Hypothetical protein PH1575 {Pyrococcus horikoshii [TaxId: 53953]} Length = 284 Back     information, alignment and structure
>d2i7na1 c.55.1.14 (A:236-381) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 146 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query346
d1xfia_360 Hypothetical protein At2g17340 {Thale cress (Arabi 100.0
d2g8la1284 Hypothetical protein PH1575 {Pyrococcus horikoshii 100.0
d2ffja1282 Hypothetical protein AF1104 {Archaeoglobus fulgidu 100.0
d2i7na1146 Pantothenate kinase 1, PANK1 {Human (Homo sapiens) 97.94
d2i7na2212 Pantothenate kinase 1, PANK1 {Human (Homo sapiens) 95.95
>d1xfia_ e.50.1.1 (A:) Hypothetical protein At2g17340 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: AF1104-like
superfamily: AF1104-like
family: AF1104-like
domain: Hypothetical protein At2g17340
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.4e-85  Score=639.97  Aligned_cols=297  Identities=34%  Similarity=0.583  Sum_probs=262.8

Q ss_pred             HHHHHHHHHHHhhHHHHHHHHhhcCCCCCchhhhhhhHHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHHHHhhhcCCc
Q psy11662          8 AKQEYWLNCFEESVNKFAERAIASQPHSTTGEERATKFREKYFAERAIASQPHSTTGEERATKFREKYVSRLHHLKQHPL   87 (346)
Q Consensus         8 ~~~~~w~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ra~~f~~~~~~~L~~l~~~p~   87 (346)
                      .+|.|||+||+++|++|+++| +||++.+|                          |++||++|+++|.++|++++++|.
T Consensus        35 ~~~~~Wl~~f~~~i~~~~~~A-~s~~~~~d--------------------------a~~Ra~~f~~~y~~~L~~l~~~p~   87 (360)
T d1xfia_          35 PNEISWINVFANSIPSFKKRA-ESDITVPD--------------------------APARAEKFAERYAGILEDLKKDPE   87 (360)
T ss_dssp             HHHHHHHHHHHTTHHHHHHHH-HTCTTSTT--------------------------HHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             hhHHHHHHHHHHHHHHHHHHH-hhCCCCCC--------------------------HHHHHHHHHHHHHHHHHHHHhCCc
Confidence            578999999999999999999 59999999                          999999999999999999999999


Q ss_pred             cccccCCcCCCCCchhhhHH-HHHHHHhhhcCCCCcchHHhhHhhHHHHHHHHHHHHhHhhhhccCCch-------hhh-
Q psy11662         88 LFCFDYDFSAYGNLTVRSLL-DTIEHYLKEFDFPDPYLEFVKFETKYIADCLDFIAANLINSIECMDGK-------SIK-  158 (346)
Q Consensus        88 ~~~~~~~~~~~g~~~~r~ll-~~re~~lr~~g~~Dpy~~~K~~eN~~Al~~l~~lr~~v~~~ld~l~~~-------~~~-  158 (346)
                               +||.++++.|| ++||+|||++||+|||+++|+.+|+.|++++    |.+.+++|++.+.       +.. 
T Consensus        88 ---------~~g~~~~~~ll~~~re~~Lr~~Gf~DpY~~~K~~eN~~Al~~l----p~~~~~id~i~d~~~~l~~~vr~a  154 (360)
T d1xfia_          88 ---------SHGGPPDGILLCRLREQVLRELGFRDIFKKVKDEENAKAISLF----PQVVSLSDAIEDDGKRLENLVRGI  154 (360)
T ss_dssp             ---------GGGCSCCHHHHHHHHHHHHHHTTCSCTTHHHHHHHHHHHHHHH----HHHHHHHHTCCSHHHHHHHHHHHH
T ss_pred             ---------ccCcccHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHH----HHHHHHHhhccchHHHHHHHHHHH
Confidence                     99999998865 9999999999999999999999999999999    5555556666542       111 


Q ss_pred             ---hh-cCChhhhHHHHH----------HHhcCCCCccccHHHHHHHhcCCCCCceEEEEecCCCcceecCchHHHHHHH
Q psy11662        159 ---AT-GGGAYKYANLIQ----------EKLGLSPWLVDDLDDWLDRLNNGPPHSKAAIFVDNSGIDIVLGILPFARELL  224 (346)
Q Consensus       159 ---at-D~GA~~~~dl~~----------~~l~~r~~~vDd~d~l~~~l~~~~~~k~vl~f~DNsGeDIV~d~lPflreLl  224 (346)
                         ++ ||||+...++++          +++..+||.+||++.|.+++. +.+||+++||+|||||||+.+++||+|+|+
T Consensus       155 iAGNifD~Ga~~~~~~~~~~~~~~~~~~~~~~~rp~~vDd~d~~~~rl~-~~~~k~vly~~DNaGe~Vfd~lL~~~rell  233 (360)
T d1xfia_         155 FAGNIFDLGSAQLAEVFSRDGMSFLASCQNLVPRPWVIDDLENFQAKWI-NKSWKKAVIFVDNSGADIILGILPFARELL  233 (360)
T ss_dssp             HHHHHC---------------CCHHHHTTCSCCSSCSEECHHHHHHHHT-TTCCCEEEEECCBTTHHHHHTHHHHHHHHH
T ss_pred             HHHHhhhcccccchhhhccccchHHHHHHHhhcCCCccccHHHHHHHHh-cCCcceEEEEecCCchHHHHHHHHHHHHHh
Confidence               22 999987666543          667799999999999999998 778999999999999999899999999999


Q ss_pred             hCCCeEEEEEecccccchhhHHHHHHHHHHHhhHHHHHHHhhcCCceEEEecCCCCcccCccccCHHHHHHHhcCCEEEE
Q psy11662        225 RRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQAGPCLDLSRLGRDLATELSSIDLIVL  304 (346)
Q Consensus       225 ~~Gs~V~l~v~s~P~LNDvT~~eL~~llt~~~~~d~~l~~A~~~~~l~vv~sG~~~pg~dl~~~s~el~~~~~~aDLVIs  304 (346)
                      ++|++|+++||++|+|||+|++||..++..++..|+++. +++.+.++|++||+++||+||+++|+||++++++|||||+
T Consensus       234 ~~g~~V~l~v~~~PilNDvT~~El~~~~~~~~~~~~~~~-gld~~~~~Vv~sG~~~Pg~dL~~~s~E~~~~~~~aDLVI~  312 (360)
T d1xfia_         234 RRGAQVVLAANELPSINDITCTELTEILSQLKDENGQLL-GVDTSKLLIANSGNDLPVIDLSRVSQELAYLSSDADLVIV  312 (360)
T ss_dssp             HTTCEEEEEEBSSCCTTBCBHHHHHHHHHHHC--CCEET-TEECTTEEEEECCCCSSSCCTTSBCHHHHHHHTTCSEEEE
T ss_pred             cCCCeEEEEECCCcchhhhhHHHHHHHHHHHhhhhhHhh-hhcccceEEecCCCCCCCcChHhCCHHHHHHHhcCCEEEE
Confidence            999999999999999999999999999999998888773 5677888999999999999999999999999999999999


Q ss_pred             eccCCccccccccccccccchhhhhcCHHHHHHhCCccCcCC
Q psy11662        305 EGMGRTVHTNLNAKFTCESLKLAVIKNRWLAQRLGGQMFSVA  346 (346)
Q Consensus       305 kGMGral~tN~~a~f~~~~lkLa~iK~~~vA~~Lg~~~~~~v  346 (346)
                      |||||++||||+++|+|+++||+||||+|||++|||+|||||
T Consensus       313 KGMGr~~~tN~~a~f~c~~lkL~~vK~~~vA~~lGg~~~d~V  354 (360)
T d1xfia_         313 EGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCV  354 (360)
T ss_dssp             ESHHHHTTBSTTCCCSSEEEEEEECCCHHHHHHHTCCTTCEE
T ss_pred             cCCcchhhccchhhcCCCeehhhhhcCHHHHHHhCCccccEE
Confidence            999999999999999999999999999999999999999997
>d2g8la1 e.50.1.1 (A:1-284) Hypothetical protein PH1575 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2ffja1 e.50.1.1 (A:7-288) Hypothetical protein AF1104 {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2i7na1 c.55.1.14 (A:236-381) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure