Psyllid ID: psy11832

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490----
Protein Sequence
MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAGGLSSIPGGAEVFSALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGKDIL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccHHHcHHHHHHccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccccccHHHHHcccccccEEEEcccccccccccccccccHHHHHHHHHccccccccccccEEcccEEEccccccHHHHHHHHHHcccccEEEEEccccccccccccHHHHHHccccccEEEEEccccccccccccccccccccccHHHHHHHHHHHccccccEEEEcccccccccccccccccHHHHHHHcccccccccccccccccccccccccEEEEEcccccEEEccccccccEEEEEccccccccccccccccccccccccccccccccEEEcccHHHHHHHHHHHccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccHHccccccccccHHHHHHHHHccccHHHHHEHHHHHHccHHHHHHHHHHccccccccHHHHHHHHHHHcccEEEEEEcHccccccccHHHHHHHHHHHcccEEEEEEcccccHHHHccccHHHEEEccEEEEEEEEcccccEEcHHHHHHHHccccccEccccccEEEEEEccEccccccHHHHHHccccccccEEEEEcccccccccHHHHccccccccEccEEEEEcccccccccHHHHHcccEEEEEEcccccHHHHccccHHHEEEccEEEEEEEEccccccccHHHHHHHHHHcccccccccccEEcccEEEEccccccEEEEEEcccccccccccEEEEEccccccccccHHHHHcccccccccccccccccEEEEcccHHHHHHHHHHcccHHHHHHHHHHHcccccccccccccEEEEccccHHHHHHHHHHcccHHHHHHHccccccccccHHcccHEEEEccccHHHHHHHHHHccHHHHc
Coil and Loop (DISEMBL)
mfgaagipdfrspgsglydnlekyklphpmaifeldyfkhrPEAFYTLAKelypgsfkptpchYFLKLLHQKNLLLRHFTQvywgsfkptpchYFLKLLHQKNLLLRHFTQNIDNleriaglpddklveahgsfhtshcltcrkDYSVAWMKERIFAEVIPTcekcnglvkpdivffgenlpsryfhrvdvdfpkaDLLLIMGTslvvqpfcslvdkvdvdfpkaDLLLIMGTSlvvqpfcslvdktnirgsdsdnidnleriaglpddklveahgsfhtshcltcrkDYSVAWMKEGNLLGRMGITLGlhagglssipggAEVFSALCLEFgvhsasapphcprllinkekvgvgsrnplmgllglseglgfdnennvrdvflegdcdsgCQKLADMLGwgiplmgllglseglgfdnennvrdvflegdcdsgCQKLADMLGwgiplmgllglseglgfdnennvrdvflegdcdsgCQKLADMLGWGKDIL
Flexible Loop (DISEMBL)
mfgaagipdfrspgsgLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGsfhtshcltcRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSLVDKTnirgsdsdnidNLERIAGLPDDKLVEAHGSFHtshcltcrkDYSVAWMKEGNLLGRMGITLGLHAGGLSSIPGGAEVFSALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGKDIL
Low Complexity Region (SEG)
MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFlkllhqknlllRHFTQVYWGSFKPTPCHYFlkllhqknlllRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAGGLSSIPGGAEVFSALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPlmgllglseglgFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPlmgllglseglgFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPlmgllglseglgFDNENNVRDVFLEGDCDSGCQKLADMLGWGKDIL
Disordered region (IsUnstruct)
****************LYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSLVDKTNIRGSD*DNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAGGLSSIPGGAEVFSALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWG****
Disordered Region (DISOPRED)
MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAGGLSSIPGGAEVFSALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLL****************************************************************GDCDSGCQKLADMLGWGKDIL
Disordered Region (DISEMBL)
MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAGGLSSIPGGAEVFSALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGKDIL
Disordered Region (DISPRO)
*****GIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAGGLSSIPGGAEVFSALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGKD*L
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAGGLSSIPGGAEVFSALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGKDIL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	494	2.2.26 [Sep-21-2011]
Q9I7I7	355	NAD-dependent protein dea	yes	N/A	0.467	0.650	0.513	1e-69
Q8VDQ8	389	NAD-dependent protein dea	yes	N/A	0.414	0.526	0.543	2e-68
Q4R834	389	NAD-dependent protein dea	N/A	N/A	0.386	0.491	0.569	4e-68
Q8IXJ6	389	NAD-dependent protein dea	yes	N/A	0.386	0.491	0.569	5e-68
Q5RBF1	352	NAD-dependent protein dea	yes	N/A	0.386	0.542	0.569	9e-68
Q5RJQ4	350	NAD-dependent protein dea	yes	N/A	0.386	0.545	0.560	6e-67
Q7ZVK3	379	NAD-dependent protein dea	yes	N/A	0.386	0.503	0.551	7e-67
Q54QE6	512	NAD-dependent deacetylase	yes	N/A	0.370	0.357	0.541	1e-59
Q9NTG7	399	NAD-dependent protein dea	no	N/A	0.382	0.473	0.504	1e-56
Q8R104	257	NAD-dependent protein dea	no	N/A	0.382	0.735	0.495	3e-53

>sp|Q9I7I7|SIRT2_DROME NAD-dependent protein deacetylase Sirt2 OS=Drosophila melanogaster GN=Sirt2 PE=3 SV=1

 Score =  264 bits (675), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 136/265 (51%), Positives = 170/265 (64%), Gaps = 34/265 (12%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSPGSGLY NL+KY+LPHP AIF+LDYF+  P  F+ LAKELYPGSF      
Sbjct: 61  SAGIPDFRSPGSGLYSNLKKYELPHPTAIFDLDYFEKNPAPFFALAKELYPGSFI----- 115

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                    PTP HYF++LL+ K LL RH+TQNID L+R+ GLP
Sbjct: 116 -------------------------PTPAHYFIRLLNDKGLLQRHYTQNIDTLDRLTGLP 150

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPS 183
           +DK++EAHGSFHT+HC+ CRK+Y + WMK  IFA+ +P C+KC G+VKPDIVFFGENLP 
Sbjct: 151 EDKIIEAHGSFHTNHCIKCRKEYDMDWMKAEIFADRLPKCQKCQGVVKPDIVFFGENLPK 210

Query: 184 RYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSL 243
           R++   + DF   DLL+IMGTSL VQPF SLV +     P+  + L++    V Q  C L
Sbjct: 211 RFYSSPEEDFQDCDLLIIMGTSLEVQPFASLVWRPG---PRC-IRLLINRDAVGQASCVL 266

Query: 244 VDKTNIRGSDSDNIDNLERIAGLPD 268
               N R    D  +N   +A L D
Sbjct: 267 FMDPNTRSLLFDKPNNTRDVAFLGD 291

NAD-dependent protein deacetylase (By similarity). May be involved in the regulation of life span.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: -

>sp|Q8VDQ8|SIR2_MOUSE NAD-dependent protein deacetylase sirtuin-2 OS=Mus musculus GN=Sirt2 PE=1 SV=2

 Score =  260 bits (664), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 130/239 (54%), Positives = 159/239 (66%), Gaps = 34/239 (14%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSP +GLY NLEKY LP+P AIFE+ YFK  PE F+ LAKELYPG FK     
Sbjct: 90  SAGIPDFRSPSTGLYANLEKYHLPYPEAIFEISYFKKHPEPFFALAKELYPGQFK----- 144

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                    PT CHYF++LL +K LLLR +TQNID LER+AGL 
Sbjct: 145 -------------------------PTICHYFIRLLKEKGLLLRCYTQNIDTLERVAGLE 179

Query: 124 DDKLVEAHGSFHTSHCL--TCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENL 181
              LVEAHG+F+TSHC+  +CRK+Y++ WMKE+IF+E  P CE+C  +VKPDIVFFGENL
Sbjct: 180 PQDLVEAHGTFYTSHCVNTSCRKEYTMGWMKEKIFSEATPRCEQCQSVVKPDIVFFGENL 239

Query: 182 PSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPF 240
           PSR+F  +  DF K DLL+IMGTSL VQPF SL+ K  +  P+  LL+    +    PF
Sbjct: 240 PSRFFSCMQSDFSKVDLLIIMGTSLQVQPFASLISKAPLATPR--LLINKEKTGQTDPF 296

NAD-dependent deacetylase, which deacetylates the 'Lys-40' of alpha-tubulin. Involved in the control of mitotic exit in the cell cycle, probably via its role in the regulation of cytoskeleton.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: -

>sp|Q4R834|SIR2_MACFA NAD-dependent protein deacetylase sirtuin-2 OS=Macaca fascicularis GN=SIRT2 PE=2 SV=1

 Score =  259 bits (661), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 127/223 (56%), Positives = 153/223 (68%), Gaps = 32/223 (14%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSP +GLYDNLEKY LP+P AIFE+ YFK  PE F+ LAKELYPG FK     
Sbjct: 90  SAGIPDFRSPSTGLYDNLEKYHLPYPEAIFEISYFKKHPEPFFALAKELYPGQFK----- 144

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                    PT CHYF++LL  K LLLR +TQNID LERIAGL 
Sbjct: 145 -------------------------PTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLE 179

Query: 124 DDKLVEAHGSFHTSHCLT--CRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENL 181
            + LVEAHG+F+TSHC++  CR +Y ++WMKE+IF+EV P CE C  LVKPDIVFFGE+L
Sbjct: 180 QEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSEVTPKCEDCQSLVKPDIVFFGESL 239

Query: 182 PSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK 224
           P+R+F  +  DF K DLLL+MGTSL VQPF SL+ K  +  P+
Sbjct: 240 PARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISKAPLSTPR 282

NAD-dependent deacetylase, which deacetylates the 'Lys-40' of alpha-tubulin. Involved in the control of mitotic exit in the cell cycle, probably via its role in the regulation of cytoskeleton.

Macaca fascicularis (taxid: 9541)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: -

>sp|Q8IXJ6|SIR2_HUMAN NAD-dependent protein deacetylase sirtuin-2 OS=Homo sapiens GN=SIRT2 PE=1 SV=2

 Score =  259 bits (661), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 127/223 (56%), Positives = 153/223 (68%), Gaps = 32/223 (14%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSP +GLYDNLEKY LP+P AIFE+ YFK  PE F+ LAKELYPG FK     
Sbjct: 90  SAGIPDFRSPSTGLYDNLEKYHLPYPEAIFEISYFKKHPEPFFALAKELYPGQFK----- 144

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                    PT CHYF++LL  K LLLR +TQNID LERIAGL 
Sbjct: 145 -------------------------PTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLE 179

Query: 124 DDKLVEAHGSFHTSHCLT--CRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENL 181
            + LVEAHG+F+TSHC++  CR +Y ++WMKE+IF+EV P CE C  LVKPDIVFFGE+L
Sbjct: 180 QEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSEVTPKCEDCQSLVKPDIVFFGESL 239

Query: 182 PSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK 224
           P+R+F  +  DF K DLLL+MGTSL VQPF SL+ K  +  P+
Sbjct: 240 PARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISKAPLSTPR 282

NAD-dependent protein deacetylase, which deacetylates the 'Lys-40' of alpha-tubulin. Involved in the control of mitotic exit in the cell cycle, probably via its role in the regulation of cytoskeleton.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: -

>sp|Q5RBF1|SIR2_PONAB NAD-dependent protein deacetylase sirtuin-2 OS=Pongo abelii GN=SIRT2 PE=2 SV=1

 Score =  258 bits (658), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 127/223 (56%), Positives = 153/223 (68%), Gaps = 32/223 (14%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSP +GLYDNLEKY LP+P AIFE+ YFK  PE F+ LAKELYPG FK     
Sbjct: 53  SAGIPDFRSPSTGLYDNLEKYHLPYPEAIFEISYFKKHPEPFFALAKELYPGQFK----- 107

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                    PT CHYF++LL  K LLLR +TQNID LERIAGL 
Sbjct: 108 -------------------------PTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLE 142

Query: 124 DDKLVEAHGSFHTSHCLT--CRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENL 181
            + LVEAHG+F+TSHC++  CR +Y ++WMKE+IF+EV P CE C  LVKPDIVFFGE+L
Sbjct: 143 QEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSEVTPKCEDCQSLVKPDIVFFGESL 202

Query: 182 PSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK 224
           P+R+F  +  DF K DLLL+MGTSL VQPF SL+ K  +  P+
Sbjct: 203 PARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISKAPLSTPR 245

NAD-dependent deacetylase, which deacetylates the 'Lys-40' of alpha-tubulin. Involved in the control of mitotic exit in the cell cycle, probably via its role in the regulation of cytoskeleton.

Pongo abelii (taxid: 9601)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: -

>sp|Q5RJQ4|SIR2_RAT NAD-dependent protein deacetylase sirtuin-2 OS=Rattus norvegicus GN=Sirt2 PE=1 SV=1

 Score =  255 bits (651), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 125/223 (56%), Positives = 152/223 (68%), Gaps = 32/223 (14%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSP +GLY NLEKY LP+P AIFE+ YFK  PE F+ LAKELYPG FK     
Sbjct: 53  SAGIPDFRSPSTGLYANLEKYHLPYPEAIFEISYFKKHPEPFFALAKELYPGQFK----- 107

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                    PT CHYF++LL +K LLLR +TQNID LER+AGL 
Sbjct: 108 -------------------------PTICHYFIRLLKEKGLLLRCYTQNIDTLERVAGLE 142

Query: 124 DDKLVEAHGSFHTSHCL--TCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENL 181
              LVEAHG+F+TSHC+  +C K+Y+++WMKE+IF+E  P CEKC  +VKPDIVFFGENL
Sbjct: 143 PQDLVEAHGTFYTSHCVNTSCGKEYTMSWMKEKIFSEATPKCEKCQNVVKPDIVFFGENL 202

Query: 182 PSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK 224
           P R+F  +  DF K DLL+IMGTSL VQPF SL+ K  +  P+
Sbjct: 203 PPRFFSCMQSDFSKVDLLIIMGTSLQVQPFASLISKAPLATPR 245

NAD-dependent deacetylase, which deacetylates the 'Lys-40' of alpha-tubulin. Involved in the control of mitotic exit in the cell cycle, probably via its role in the regulation of cytoskeleton.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: -

>sp|Q7ZVK3|SIR2_DANRE NAD-dependent protein deacetylase sirtuin-2 OS=Danio rerio GN=sirt2 PE=2 SV=1

 Score =  255 bits (651), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 123/223 (55%), Positives = 153/223 (68%), Gaps = 32/223 (14%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSPG+GLY NL+KY LP+P AIF++DYFK  PE F+ LA+ELYPG FK     
Sbjct: 88  SAGIPDFRSPGTGLYANLQKYNLPYPEAIFQIDYFKKHPEPFFALARELYPGQFK----- 142

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                    PT  HYF+K+L  K LL R ++QNID LER+AGL 
Sbjct: 143 -------------------------PTVYHYFIKMLKDKGLLRRCYSQNIDTLERVAGLE 177

Query: 124 DDKLVEAHGSFHTSHCLT--CRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENL 181
            + L+EAHG+FHTSHC++  CRK+YS+ WMK +IF+E IP C+ C  LVKPDIVFFGE+L
Sbjct: 178 GEDLIEAHGTFHTSHCVSFLCRKEYSMDWMKNQIFSEEIPKCDSCGSLVKPDIVFFGESL 237

Query: 182 PSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK 224
           PSR+F  +  DFP+ DLL+IMGTSL VQPF SLV +V    P+
Sbjct: 238 PSRFFTSMKADFPQCDLLIIMGTSLQVQPFASLVSRVSNRCPR 280

Probable NAD-dependent protein deacetylase.

Danio rerio (taxid: 7955)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: -

>sp|Q54QE6|SIR2A_DICDI NAD-dependent deacetylase sir2A OS=Dictyostelium discoideum GN=sir2A PE=2 SV=1

 Score =  231 bits (589), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 117/216 (54%), Positives = 147/216 (68%), Gaps = 33/216 (15%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           AAGIPDFRSP +GLY+ L+KY LP+  AIF+++YFK  P+ FY L+KEL+PGSF      
Sbjct: 264 AAGIPDFRSPKTGLYEKLDKYDLPYREAIFDIEYFKKNPKPFYVLSKELFPGSFN----- 318

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                    PT  HYF+KLL  K LLLR+FTQNID LERIAG+P
Sbjct: 319 -------------------------PTTVHYFIKLLSDKGLLLRNFTQNIDTLERIAGIP 353

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEK---CNGLVKPDIVFFGEN 180
            +KLVEAHGSF TSHC++C+K+YS  ++KERIF + +P C +   C G+VKPDIVFFGE+
Sbjct: 354 ANKLVEAHGSFATSHCVSCKKEYSTEYVKERIFKDELPECTETSGCKGIVKPDIVFFGES 413

Query: 181 LPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVD 216
           LPSR+      DF K DLLL++GTSL V PF SL++
Sbjct: 414 LPSRFNDCAREDFTKCDLLLVIGTSLKVHPFASLIN 449

NAD-dependent deacetylase, which plays an important role in the regulation of transcriptional repression.

Dictyostelium discoideum (taxid: 44689)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: -

>sp|Q9NTG7|SIR3_HUMAN NAD-dependent protein deacetylase sirtuin-3, mitochondrial OS=Homo sapiens GN=SIRT3 PE=1 SV=2

 Score =  221 bits (562), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 111/220 (50%), Positives = 142/220 (64%), Gaps = 31/220 (14%)

Query: 5   AGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHY 64
           +GIPDFRSPGSGLY NL++Y LP+P AIFEL +F H P+ F+TLAKELYPG++K      
Sbjct: 152 SGIPDFRSPGSGLYSNLQQYDLPYPEAIFELPFFFHNPKPFFTLAKELYPGNYK------ 205

Query: 65  FLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPD 124
                                   P   HYFL+LLH K LLLR +TQNID LER++G+P 
Sbjct: 206 ------------------------PNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPA 241

Query: 125 DKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSR 184
            KLVEAHG+F ++ C  C++ +    ++  + A+ +P C  C G+VKPDIVFFGE LP R
Sbjct: 242 SKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCPVCTGVVKPDIVFFGEPLPQR 301

Query: 185 YFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK 224
           +   V VDFP ADLLLI+GTSL V+PF SL + V    P+
Sbjct: 302 FLLHV-VDFPMADLLLILGTSLEVEPFASLTEAVRSSVPR 340

NAD-dependent protein deacetylase. Activates mitochondrial target proteins, including ACSS1, IDH2 and GDH by deacetylating key lysine residues. Contributes to the regulation of the cellular energy metabolism. Important for regulating tissue-specific ATP levels.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: -

>sp|Q8R104|SIR3_MOUSE NAD-dependent protein deacetylase sirtuin-3 OS=Mus musculus GN=Sirt3 PE=2 SV=1

 Score =  210 bits (534), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 109/220 (49%), Positives = 138/220 (62%), Gaps = 31/220 (14%)

Query: 5   AGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHY 64
           +GIPDFRSPGSGLY NL++Y +P+P AIFEL +F H P+ F+ LAKELYPG       HY
Sbjct: 10  SGIPDFRSPGSGLYSNLQQYDIPYPEAIFELGFFFHNPKPFFMLAKELYPG-------HY 62

Query: 65  FLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPD 124
                                  +P   HYFL+LLH K LLLR +TQNID LER +G+P 
Sbjct: 63  -----------------------RPNVTHYFLRLLHDKELLLRLYTQNIDGLERASGIPA 99

Query: 125 DKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSR 184
            KLVEAHG+F T+ C  CR+ +    +   + A+ +P C  C G+VKPDIVFFGE LP+R
Sbjct: 100 SKLVEAHGTFVTATCTVCRRSFPGEDIWADVMADRVPRCPVCTGVVKPDIVFFGEQLPAR 159

Query: 185 YFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK 224
           +   +  DF  ADLLLI+GTSL V+PF SL + V    P+
Sbjct: 160 FLLHM-ADFALADLLLILGTSLEVEPFASLSEAVQKSVPR 198

NAD-dependent protein deacetylase. Activates mitochondrial target proteins, including ACSS1, IDH2 and GDH by deacetylating key lysine residues (By similarity). Contributes to the regulation of the cellular energy metabolism. Important for regulating tissue-specific ATP levels.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	494
242017277	338	NAD-dependent deacetylase sirtuin-2, put	0.386	0.565	0.597	7e-73
195390709	345	GJ23031 [Drosophila virilis] gi|19415209	0.427	0.611	0.532	9e-70
91086449	364	PREDICTED: similar to NAD-dependent deac	0.374	0.508	0.589	2e-69
301612650	379	PREDICTED: NAD-dependent deacetylase sir	0.386	0.503	0.573	4e-69
195449778	354	GK22445 [Drosophila willistoni] gi|19416	0.429	0.598	0.546	5e-69
195498174	385	GE25662 [Drosophila yakuba] gi|194182514	0.372	0.477	0.584	3e-68
194899791	385	GG23867 [Drosophila erecta] gi|190651144	0.423	0.542	0.537	3e-68
194764751	394	GF23025 [Drosophila ananassae] gi|190614	0.372	0.467	0.588	5e-68
363987304	386	FI17127p1 [Drosophila melanogaster]	0.467	0.598	0.513	6e-68
24648389	355	Sirt2 [Drosophila melanogaster] gi|74866	0.467	0.650	0.513	8e-68

>gi|242017277|ref|XP_002429118.1| NAD-dependent deacetylase sirtuin-2, putative [Pediculus humanus corporis] gi|212513982|gb|EEB16380.1| NAD-dependent deacetylase sirtuin-2, putative [Pediculus humanus corporis]

 Score =  281 bits (718), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 132/221 (59%), Positives = 163/221 (73%), Gaps = 30/221 (13%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSPGSGLYDNL KYKLPHP AIF +DYFK  PE F+ LAKEL+PGS+K     
Sbjct: 58  SAGIPDFRSPGSGLYDNLGKYKLPHPQAIFAIDYFKENPEPFFHLAKELFPGSYK----- 112

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                    PT  HYF++LLH+K LLLRH+TQNID LE++AG+P
Sbjct: 113 -------------------------PTVAHYFVRLLHEKGLLLRHYTQNIDGLEKLAGIP 147

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPS 183
            +K+VEAHG+F+TSHCL+C+K YS+ WMK +IF E +P CE C G+VKPDIVFFGENLP+
Sbjct: 148 SEKVVEAHGTFYTSHCLSCKKKYSLEWMKNKIFTEKVPLCEDCKGVVKPDIVFFGENLPN 207

Query: 184 RYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK 224
           R+F   + DFPKADLL+IMG+SL VQPF SLVD+V+ + P+
Sbjct: 208 RFFSLSEEDFPKADLLIIMGSSLAVQPFASLVDRVNSNCPR 248

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195390709|ref|XP_002054010.1| GJ23031 [Drosophila virilis] gi|194152096|gb|EDW67530.1| GJ23031 [Drosophila virilis]

 Score =  270 bits (691), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 130/244 (53%), Positives = 172/244 (70%), Gaps = 33/244 (13%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSPGSGLY+NL+KYKLPHP AIF++DYF+  P  F+ LAKELYPGSF      
Sbjct: 62  SAGIPDFRSPGSGLYNNLKKYKLPHPTAIFDVDYFQKNPTPFFALAKELYPGSFV----- 116

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                    PTP HYF++LLH+K LL RH+TQNID L+R+AGLP
Sbjct: 117 -------------------------PTPAHYFVRLLHEKGLLQRHYTQNIDTLDRLAGLP 151

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPS 183
           ++K++EAHGSF+T+HCL C+ +Y +AWMK++IFA+ +P+CEKCNGLVKPDIVFFGENLP+
Sbjct: 152 ENKIIEAHGSFYTNHCLKCKHEYDMAWMKKKIFADELPSCEKCNGLVKPDIVFFGENLPA 211

Query: 184 RYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSL 243
           ++++  + DF + DLL+IMGTSL VQPF SL+ +     P+   LLI   ++    F   
Sbjct: 212 KFYNSPEEDFKECDLLIIMGTSLEVQPFASLIHRAG---PRCIRLLINRDAVGRASFAPW 268

Query: 244 VDKT 247
           +D +
Sbjct: 269 MDPS 272

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91086449|ref|XP_969055.1| PREDICTED: similar to NAD-dependent deacetylase sirtuin 2 homolog [Tribolium castaneum] gi|270010322|gb|EFA06770.1| hypothetical protein TcasGA2_TC009705 [Tribolium castaneum]

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 128/217 (58%), Positives = 158/217 (72%), Gaps = 32/217 (14%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSPGSGLYDNL+KY LPHP AIFELD+F   P+ F+TLAKELYPGSF      
Sbjct: 91  SAGIPDFRSPGSGLYDNLQKYNLPHPQAIFELDFFHENPKPFFTLAKELYPGSF------ 144

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                   KPT  HYF+KLL +K++LLRH+TQNID LERIAG+P
Sbjct: 145 ------------------------KPTISHYFIKLLIEKDVLLRHYTQNIDTLERIAGIP 180

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEK--CNGLVKPDIVFFGENL 181
           ++K+VEAHG+F+T HCL CRK+Y + WMKERIF + +P CE   C G+VKPDIVFFGE L
Sbjct: 181 EEKIVEAHGTFYTGHCLACRKEYQLEWMKERIFKDEVPECESKDCKGVVKPDIVFFGEAL 240

Query: 182 PSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKV 218
           P +++  ++ DF K DLL+I+G+SLVVQPF SLVD+V
Sbjct: 241 PDKFYSLIENDFKKCDLLIILGSSLVVQPFASLVDRV 277

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|301612650|ref|XP_002935827.1| PREDICTED: NAD-dependent deacetylase sirtuin-2-like [Xenopus (Silurana) tropicalis]

 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 128/223 (57%), Positives = 158/223 (70%), Gaps = 32/223 (14%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSPGSGLY NL+KY LP+P AIF++ YFK  PE F+ LA+EL+PG FK     
Sbjct: 84  SAGIPDFRSPGSGLYSNLQKYNLPYPEAIFQIGYFKENPEPFFALARELFPGQFK----- 138

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                    PT CHYF++LL +K LLLR ++QNID LER+AGL 
Sbjct: 139 -------------------------PTICHYFIRLLKEKGLLLRCYSQNIDTLERVAGLT 173

Query: 124 DDKLVEAHGSFHTSHCLT--CRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENL 181
            D LVEAHG+FH+SHC+   CR +YS++WMKE+IF+++IP CEKCN LVKPDIVFFGE+L
Sbjct: 174 SDDLVEAHGTFHSSHCVDTFCRAEYSLSWMKEKIFSDLIPKCEKCNNLVKPDIVFFGESL 233

Query: 182 PSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK 224
           PSR+F  +  DFPK DLL++MGTSL VQPF SLV KV    P+
Sbjct: 234 PSRFFSAIKSDFPKVDLLIVMGTSLQVQPFASLVSKVSSKTPR 276

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|195449778|ref|XP_002072220.1| GK22445 [Drosophila willistoni] gi|194168305|gb|EDW83206.1| GK22445 [Drosophila willistoni]

 Score =  268 bits (685), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 134/245 (54%), Positives = 165/245 (67%), Gaps = 33/245 (13%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSPGSGLYDNL+KYKLPHP AIF+LDYF   P+ F+ LAKELYPGSF+     
Sbjct: 62  SAGIPDFRSPGSGLYDNLKKYKLPHPTAIFDLDYFMKNPKPFFALAKELYPGSFE----- 116

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                    PTP HYF++LLH+K LL RH+TQNID L+++AG+P
Sbjct: 117 -------------------------PTPSHYFVRLLHEKGLLQRHYTQNIDTLDQLAGIP 151

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPS 183
            +K+VEAHGSF+ +HCL CRK+Y +AWMK +IFA+ +P CEKC G+VKPDIVFFGENLP 
Sbjct: 152 TEKIVEAHGSFYLNHCLKCRKEYDMAWMKAQIFADKLPKCEKCKGVVKPDIVFFGENLPY 211

Query: 184 RYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSL 243
           R++   D DF   DLL+IMGTSL VQPF SL+       PK   LLI    +    + S 
Sbjct: 212 RFYSLPDEDFKDCDLLIIMGTSLEVQPFASLIRHAG---PKCVRLLINREPVGRASYVSA 268

Query: 244 VDKTN 248
            DK +
Sbjct: 269 FDKND 273

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195498174|ref|XP_002096413.1| GE25662 [Drosophila yakuba] gi|194182514|gb|EDW96125.1| GE25662 [Drosophila yakuba]

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 125/214 (58%), Positives = 152/214 (71%), Gaps = 30/214 (14%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSPGSGLY NL+KYKLPHP AIF+LDYF+  P  F+ LAKELYPGSF      
Sbjct: 91  SAGIPDFRSPGSGLYSNLKKYKLPHPTAIFDLDYFEKNPAPFFALAKELYPGSFI----- 145

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                    PTP HYF++LL+ K LL RH+TQNID L+R+ GLP
Sbjct: 146 -------------------------PTPAHYFVRLLNDKGLLQRHYTQNIDTLDRLTGLP 180

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPS 183
           +DK++EAHGSFHT+HC+ CR++Y +AWMK  I A+ +P C+KCNG+VKPDIVFFGENLP 
Sbjct: 181 EDKIIEAHGSFHTNHCIKCRREYDMAWMKAEILADRLPKCKKCNGVVKPDIVFFGENLPQ 240

Query: 184 RYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDK 217
           R++   D DF   DLL+IMGTSL VQPF SLV +
Sbjct: 241 RFYTSPDEDFQDCDLLIIMGTSLEVQPFASLVQR 274

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194899791|ref|XP_001979441.1| GG23867 [Drosophila erecta] gi|190651144|gb|EDV48399.1| GG23867 [Drosophila erecta]

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 130/242 (53%), Positives = 163/242 (67%), Gaps = 33/242 (13%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSPGSGLY NL+KYKLPHP AIF+LDYF+  P  F+ LAKELYPGSF      
Sbjct: 91  SAGIPDFRSPGSGLYSNLKKYKLPHPTAIFDLDYFEKNPAPFFALAKELYPGSFI----- 145

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                    PTP HYF++LL+ K LL RH+TQNID L+R+ GLP
Sbjct: 146 -------------------------PTPAHYFVRLLNDKGLLQRHYTQNIDTLDRLTGLP 180

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPS 183
           ++K++EAHGSFHT+HC+ CR++Y +AWMK  IFA+ +P C+KCNG+VKPDIVFFGENLP 
Sbjct: 181 EEKIIEAHGSFHTNHCIKCRREYDMAWMKAEIFADRLPKCKKCNGVVKPDIVFFGENLPQ 240

Query: 184 RYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSL 243
           R++   D DF   DLL+IMGTSL VQPF SL+ +     P+   LLI   ++    F   
Sbjct: 241 RFYTSPDEDFRDCDLLIIMGTSLEVQPFASLMQRPG---PRCLRLLINRDAVGQASFVPF 297

Query: 244 VD 245
           +D
Sbjct: 298 MD 299

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194764751|ref|XP_001964492.1| GF23025 [Drosophila ananassae] gi|190614764|gb|EDV30288.1| GF23025 [Drosophila ananassae]

 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 126/214 (58%), Positives = 152/214 (71%), Gaps = 30/214 (14%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSPGSGLY NL+KYKLPHP AIF+LDYF+  P  F+ LAKELYPGSF      
Sbjct: 93  SAGIPDFRSPGSGLYSNLKKYKLPHPTAIFDLDYFETNPAPFFALAKELYPGSFI----- 147

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                    PTP HYF++LL QK LL RH+TQNID L+R+ GLP
Sbjct: 148 -------------------------PTPAHYFVRLLDQKGLLQRHYTQNIDTLDRLTGLP 182

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPS 183
           ++K++EAHGSFHT+HCL CRK+Y +AWMK  IFA+ +PTCE C G+VKPDIVFFGENLP+
Sbjct: 183 EEKIIEAHGSFHTNHCLKCRKEYDMAWMKTEIFADRLPTCEVCKGVVKPDIVFFGENLPA 242

Query: 184 RYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDK 217
            ++   + DF   DLL+IMGTSL VQPF SLV +
Sbjct: 243 SFYESPNEDFRDCDLLIIMGTSLEVQPFASLVQR 276

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|363987304|gb|AEW43894.1| FI17127p1 [Drosophila melanogaster]

 Score =  264 bits (675), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 136/265 (51%), Positives = 170/265 (64%), Gaps = 34/265 (12%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSPGSGLY NL+KY+LPHP AIF+LDYF+  P  F+ LAKELYPGSF      
Sbjct: 92  SAGIPDFRSPGSGLYSNLKKYELPHPTAIFDLDYFEKNPAPFFALAKELYPGSFI----- 146

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                    PTP HYF++LL+ K LL RH+TQNID L+R+ GLP
Sbjct: 147 -------------------------PTPAHYFIRLLNDKGLLQRHYTQNIDTLDRLTGLP 181

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPS 183
           +DK++EAHGSFHT+HC+ CRK+Y + WMK  IFA+ +P C+KC G+VKPDIVFFGENLP 
Sbjct: 182 EDKIIEAHGSFHTNHCIKCRKEYDMDWMKAEIFADRLPKCQKCQGVVKPDIVFFGENLPK 241

Query: 184 RYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSL 243
           R++   + DF   DLL+IMGTSL VQPF SLV +     P+  + L++    V Q  C L
Sbjct: 242 RFYSSPEEDFQDCDLLIIMGTSLEVQPFASLVWRPG---PRC-IRLLINRDAVGQASCVL 297

Query: 244 VDKTNIRGSDSDNIDNLERIAGLPD 268
               N R    D  +N   +A L D
Sbjct: 298 FMDPNTRSLLFDKPNNTRDVAFLGD 322

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24648389|ref|NP_650880.2| Sirt2 [Drosophila melanogaster] gi|74866623|sp|Q9I7I7.1|SIRT2_DROME RecName: Full=NAD-dependent protein deacetylase Sirt2; AltName: Full=Regulatory protein SIR2 homolog; AltName: Full=SIR2-related protein gi|10726648|gb|AAG22161.1| Sirt2 [Drosophila melanogaster]

 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 136/265 (51%), Positives = 170/265 (64%), Gaps = 34/265 (12%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSPGSGLY NL+KY+LPHP AIF+LDYF+  P  F+ LAKELYPGSF      
Sbjct: 61  SAGIPDFRSPGSGLYSNLKKYELPHPTAIFDLDYFEKNPAPFFALAKELYPGSFI----- 115

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                    PTP HYF++LL+ K LL RH+TQNID L+R+ GLP
Sbjct: 116 -------------------------PTPAHYFIRLLNDKGLLQRHYTQNIDTLDRLTGLP 150

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPS 183
           +DK++EAHGSFHT+HC+ CRK+Y + WMK  IFA+ +P C+KC G+VKPDIVFFGENLP 
Sbjct: 151 EDKIIEAHGSFHTNHCIKCRKEYDMDWMKAEIFADRLPKCQKCQGVVKPDIVFFGENLPK 210

Query: 184 RYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSL 243
           R++   + DF   DLL+IMGTSL VQPF SLV +     P+  + L++    V Q  C L
Sbjct: 211 RFYSSPEEDFQDCDLLIIMGTSLEVQPFASLVWRPG---PRC-IRLLINRDAVGQASCVL 266

Query: 244 VDKTNIRGSDSDNIDNLERIAGLPD 268
               N R    D  +N   +A L D
Sbjct: 267 FMDPNTRSLLFDKPNNTRDVAFLGD 291

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	494
ZFIN|ZDB-GENE-030131-1028	379	sirt2 "sirtuin 2 (silent matin	0.301	0.393	0.562	3.9e-77
FB|FBgn0038788	355	Sirt2 "Sirt2" [Drosophila mela	0.372	0.518	0.510	2.9e-54
UNIPROTKB|F6QK60	390	SIRT2 "Uncharacterized protein	0.374	0.474	0.5	2e-53
UNIPROTKB|F1PTX2	417	SIRT2 "Uncharacterized protein	0.374	0.443	0.494	3.3e-53
MGI|MGI:1927664	389	Sirt2 "sirtuin 2 (silent matin	0.374	0.475	0.494	1.4e-52
UNIPROTKB|Q4R834	389	SIRT2 "NAD-dependent protein d	0.374	0.475	0.494	1.6e-51
RGD|621481	350	Sirt2 "sirtuin 2" [Rattus norv	0.374	0.528	0.489	4.2e-51
UNIPROTKB|Q5RJQ4	350	Sirt2 "NAD-dependent protein d	0.374	0.528	0.489	4.2e-51
UNIPROTKB|Q8IXJ6	389	SIRT2 "NAD-dependent protein d	0.327	0.416	0.530	6.8e-51
UNIPROTKB|Q5RBF1	352	SIRT2 "NAD-dependent protein d	0.327	0.460	0.530	6.8e-51

ZFIN|ZDB-GENE-030131-1028 sirt2 "sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 446 (162.1 bits), Expect = 3.9e-77, Sum P(3) = 3.9e-77
 Identities = 86/153 (56%), Positives = 109/153 (71%)

Query:    81 QVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCL 140
             ++Y G FKPT  HYF           R ++QNID LER+AGL  + L+EAHG+FHTSHC+
Sbjct:   135 ELYPGQFKPTVYHYFIKMLKDKGLLRRCYSQNIDTLERVAGLEGEDLIEAHGTFHTSHCV 194

Query:   141 T--CRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADL 198
             +  CRK+YS+ WMK +IF+E IP C+ C  LVKPDIVFFGE+LPSR+F  +  DFP+ DL
Sbjct:   195 SFLCRKEYSMDWMKNQIFSEEIPKCDSCGSLVKPDIVFFGESLPSRFFTSMKADFPQCDL 254

Query:   199 LLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIM 231
             L+IMGTSL VQPF SLV +V    P+  LL+ M
Sbjct:   255 LIIMGTSLQVQPFASLVSRVSNRCPR--LLINM 285

GO:0051287 "NAD binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0070403 "NAD+ binding" evidence=IEA

GO:0016811 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides" evidence=IEA

GO:0006476 "protein deacetylation" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

FB|FBgn0038788 Sirt2 "Sirt2" [Drosophila melanogaster (taxid:7227)]

 Score = 482 (174.7 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
 Identities = 96/188 (51%), Positives = 120/188 (63%)

Query:    81 QVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCL 140
             ++Y GSF PTP HYF           RH+TQNID L+R+ GLP+DK++EAHGSFHT+HC+
Sbjct:   108 ELYPGSFIPTPAHYFIRLLNDKGLLQRHYTQNIDTLDRLTGLPEDKIIEAHGSFHTNHCI 167

Query:   141 TCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLL 200
              CRK+Y + WMK  IFA+ +P C+KC G+VKPDIVFFGENLP R++   + DF   DLL+
Sbjct:   168 KCRKEYDMDWMKAEIFADRLPKCQKCQGVVKPDIVFFGENLPKRFYSSPEEDFQDCDLLI 227

Query:   201 IMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSLVDKTNIRGSDSDNIDNL 260
             IMGTSL VQPF SLV +     P+   LLI     V Q  C L    N R    D  +N 
Sbjct:   228 IMGTSLEVQPFASLVWRPG---PRCIRLLI-NRDAVGQASCVLFMDPNTRSLLFDKPNNT 283

Query:   261 ERIAGLPD 268
               +A L D
Sbjct:   284 RDVAFLGD 291

GO:0017136 "NAD-dependent histone deacetylase activity" evidence=ISS;IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0070403 "NAD+ binding" evidence=IEA

GO:0048813 "dendrite morphogenesis" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0006476 "protein deacetylation" evidence=IDA

UNIPROTKB|F6QK60 SIRT2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 468 (169.8 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
 Identities = 95/190 (50%), Positives = 124/190 (65%)

Query:    81 QVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCL 140
             ++Y G FKPT CHYF           R +TQNID LER+AGL  + LVEAHG+F+TSHC+
Sbjct:   137 ELYPGQFKPTICHYFIRLLKEKGLLLRCYTQNIDTLERVAGLEPEDLVEAHGTFYTSHCI 196

Query:   141 T--CRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADL 198
             +  CR++YS++WMKE+IF+EV P CEKC  +VKPDIVFFGENLP+R+F  +  DF K DL
Sbjct:   197 SSGCRQEYSLSWMKEKIFSEVTPKCEKCQSVVKPDIVFFGENLPARFFSCMQSDFLKVDL 256

Query:   199 LLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSLVDKTNIRGSDSDNID 258
             L+IMGTSL VQPF SL+ K  +  P+  LL+    +    PF  ++      G D D+  
Sbjct:   257 LIIMGTSLQVQPFASLIGKAPLSTPR--LLINKEKTGQTDPFLGMMMALG-GGMDFDSKK 313

Query:   259 NLERIAGLPD 268
                 +A L D
Sbjct:   314 AYRDVAWLGD 323

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0045843 "negative regulation of striated muscle tissue development" evidence=IEA

GO:0043161 "proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0043130 "ubiquitin binding" evidence=IEA

GO:0042903 "tubulin deacetylase activity" evidence=IEA

GO:0042826 "histone deacetylase binding" evidence=IEA

GO:0035035 "histone acetyltransferase binding" evidence=IEA

GO:0017136 "NAD-dependent histone deacetylase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0070403 "NAD+ binding" evidence=IEA

UNIPROTKB|F1PTX2 SIRT2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 466 (169.1 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
 Identities = 94/190 (49%), Positives = 124/190 (65%)

Query:    81 QVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCL 140
             ++Y G FKPT CHYF           R +TQNID LER+AGL  + LVEAHG+F+TSHC+
Sbjct:   163 ELYPGQFKPTVCHYFIRLLKEKGLLLRCYTQNIDTLERVAGLEPEDLVEAHGTFYTSHCI 222

Query:   141 T--CRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADL 198
             +  CR++Y ++WMKE+IF+EV P CEKC+ +VKPDIVFFGENLP+R+F  +  DF K DL
Sbjct:   223 SPLCRREYPLSWMKEKIFSEVTPKCEKCHSVVKPDIVFFGENLPARFFSCMQSDFLKVDL 282

Query:   199 LLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSLVDKTNIRGSDSDNID 258
             L+IMGTSL VQPF SL+ K  +  P+  LL+    +    PF  ++      G D D+  
Sbjct:   283 LIIMGTSLQVQPFASLISKAPLSTPR--LLINKEKTGQTDPFLGMMMGLG-GGMDFDSKK 339

Query:   259 NLERIAGLPD 268
                 +A L D
Sbjct:   340 AYRDVAWLGD 349

GO:0070403 "NAD+ binding" evidence=IEA

GO:0016811 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006476 "protein deacetylation" evidence=IEA

MGI|MGI:1927664 Sirt2 "sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 460 (167.0 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
 Identities = 94/190 (49%), Positives = 121/190 (63%)

Query:    81 QVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCL 140
             ++Y G FKPT CHYF           R +TQNID LER+AGL    LVEAHG+F+TSHC+
Sbjct:   137 ELYPGQFKPTICHYFIRLLKEKGLLLRCYTQNIDTLERVAGLEPQDLVEAHGTFYTSHCV 196

Query:   141 --TCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADL 198
               +CRK+Y++ WMKE+IF+E  P CE+C  +VKPDIVFFGENLPSR+F  +  DF K DL
Sbjct:   197 NTSCRKEYTMGWMKEKIFSEATPRCEQCQSVVKPDIVFFGENLPSRFFSCMQSDFSKVDL 256

Query:   199 LLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSLVDKTNIRGSDSDNID 258
             L+IMGTSL VQPF SL+ K  +  P+  LL+    +    PF  ++      G D D+  
Sbjct:   257 LIIMGTSLQVQPFASLISKAPLATPR--LLINKEKTGQTDPFLGMMMGLG-GGMDFDSKK 313

Query:   259 NLERIAGLPD 268
                 +A L D
Sbjct:   314 AYRDVAWLGD 323

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005874 "microtubule" evidence=ISO

GO:0006476 "protein deacetylation" evidence=ISO

GO:0007049 "cell cycle" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0008134 "transcription factor binding" evidence=ISO

GO:0008270 "zinc ion binding" evidence=ISO

GO:0016575 "histone deacetylation" evidence=IGI

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016811 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides" evidence=IEA

GO:0017136 "NAD-dependent histone deacetylase activity" evidence=ISO

GO:0033558 "protein deacetylase activity" evidence=ISO

GO:0035035 "histone acetyltransferase binding" evidence=ISO

GO:0042826 "histone deacetylase binding" evidence=ISO

GO:0042903 "tubulin deacetylase activity" evidence=ISO

GO:0043130 "ubiquitin binding" evidence=ISO

GO:0043161 "proteasomal ubiquitin-dependent protein catabolic process" evidence=ISO

GO:0045843 "negative regulation of striated muscle tissue development" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0070403 "NAD+ binding" evidence=ISO

GO:0090042 "tubulin deacetylation" evidence=ISO;IGI

UNIPROTKB|Q4R834 SIRT2 "NAD-dependent protein deacetylase sirtuin-2" [Macaca fascicularis (taxid:9541)]

 Score = 454 (164.9 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
 Identities = 94/190 (49%), Positives = 121/190 (63%)

Query:    81 QVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCL 140
             ++Y G FKPT CHYF           R +TQNID LERIAGL  + LVEAHG+F+TSHC+
Sbjct:   137 ELYPGQFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSHCV 196

Query:   141 T--CRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADL 198
             +  CR +Y ++WMKE+IF+EV P CE C  LVKPDIVFFGE+LP+R+F  +  DF K DL
Sbjct:   197 SASCRHEYPLSWMKEKIFSEVTPKCEDCQSLVKPDIVFFGESLPARFFSCMQSDFLKVDL 256

Query:   199 LLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSLVDKTNIRGSDSDNID 258
             LL+MGTSL VQPF SL+ K  +  P+  LL+    +    PF  ++      G D D+  
Sbjct:   257 LLVMGTSLQVQPFASLISKAPLSTPR--LLINKEKAGQSDPFLGMILGLG-GGMDFDSKK 313

Query:   259 NLERIAGLPD 268
                 +A L D
Sbjct:   314 AYRDVAWLGD 323

GO:0005737 "cytoplasm" evidence=ISS

GO:0043161 "proteasomal ubiquitin-dependent protein catabolic process" evidence=ISS

RGD|621481 Sirt2 "sirtuin 2" [Rattus norvegicus (taxid:10116)]

 Score = 453 (164.5 bits), Expect = 4.2e-51, Sum P(2) = 4.2e-51
 Identities = 93/190 (48%), Positives = 120/190 (63%)

Query:    81 QVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCL 140
             ++Y G FKPT CHYF           R +TQNID LER+AGL    LVEAHG+F+TSHC+
Sbjct:   100 ELYPGQFKPTICHYFIRLLKEKGLLLRCYTQNIDTLERVAGLEPQDLVEAHGTFYTSHCV 159

Query:   141 --TCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADL 198
               +C K+Y+++WMKE+IF+E  P CEKC  +VKPDIVFFGENLP R+F  +  DF K DL
Sbjct:   160 NTSCGKEYTMSWMKEKIFSEATPKCEKCQNVVKPDIVFFGENLPPRFFSCMQSDFSKVDL 219

Query:   199 LLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSLVDKTNIRGSDSDNID 258
             L+IMGTSL VQPF SL+ K  +  P+  LL+    +    PF  ++      G D D+  
Sbjct:   220 LIIMGTSLQVQPFASLISKAPLATPR--LLINKEKTGQTDPFLGMMMGLG-GGMDFDSKK 276

Query:   259 NLERIAGLPD 268
                 +A L D
Sbjct:   277 AYRDVAWLGD 286

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005737 "cytoplasm" evidence=ISO;ISS

GO:0005874 "microtubule" evidence=IEA;ISO

GO:0006476 "protein deacetylation" evidence=IEA;ISO

GO:0007067 "mitosis" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA;ISO

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA;ISO

GO:0016575 "histone deacetylation" evidence=ISO

GO:0016811 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides" evidence=IEA

GO:0017136 "NAD-dependent histone deacetylase activity" evidence=IEA;ISO

GO:0033558 "protein deacetylase activity" evidence=ISO

GO:0035035 "histone acetyltransferase binding" evidence=IEA;ISO

GO:0042826 "histone deacetylase binding" evidence=IEA;ISO

GO:0042903 "tubulin deacetylase activity" evidence=IEA;ISO

GO:0043130 "ubiquitin binding" evidence=IEA;ISO

GO:0043161 "proteasomal ubiquitin-dependent protein catabolic process" evidence=ISO;ISS

GO:0045843 "negative regulation of striated muscle tissue development" evidence=IEA;ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA;ISO

GO:0051301 "cell division" evidence=IEA

GO:0070403 "NAD+ binding" evidence=IEA;ISO

GO:0090042 "tubulin deacetylation" evidence=ISO

UNIPROTKB|Q5RJQ4 Sirt2 "NAD-dependent protein deacetylase sirtuin-2" [Rattus norvegicus (taxid:10116)]

 Score = 453 (164.5 bits), Expect = 4.2e-51, Sum P(2) = 4.2e-51
 Identities = 93/190 (48%), Positives = 120/190 (63%)

Query:    81 QVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCL 140
             ++Y G FKPT CHYF           R +TQNID LER+AGL    LVEAHG+F+TSHC+
Sbjct:   100 ELYPGQFKPTICHYFIRLLKEKGLLLRCYTQNIDTLERVAGLEPQDLVEAHGTFYTSHCV 159

Query:   141 --TCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADL 198
               +C K+Y+++WMKE+IF+E  P CEKC  +VKPDIVFFGENLP R+F  +  DF K DL
Sbjct:   160 NTSCGKEYTMSWMKEKIFSEATPKCEKCQNVVKPDIVFFGENLPPRFFSCMQSDFSKVDL 219

Query:   199 LLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSLVDKTNIRGSDSDNID 258
             L+IMGTSL VQPF SL+ K  +  P+  LL+    +    PF  ++      G D D+  
Sbjct:   220 LIIMGTSLQVQPFASLISKAPLATPR--LLINKEKTGQTDPFLGMMMGLG-GGMDFDSKK 276

Query:   259 NLERIAGLPD 268
                 +A L D
Sbjct:   277 AYRDVAWLGD 286

GO:0070403 "NAD+ binding" evidence=IEA

UNIPROTKB|Q8IXJ6 SIRT2 "NAD-dependent protein deacetylase sirtuin-2" [Homo sapiens (taxid:9606)]

 Score = 452 (164.2 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
 Identities = 88/166 (53%), Positives = 113/166 (68%)

Query:    81 QVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCL 140
             ++Y G FKPT CHYF           R +TQNID LERIAGL  + LVEAHG+F+TSHC+
Sbjct:   137 ELYPGQFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSHCV 196

Query:   141 T--CRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADL 198
             +  CR +Y ++WMKE+IF+EV P CE C  LVKPDIVFFGE+LP+R+F  +  DF K DL
Sbjct:   197 SASCRHEYPLSWMKEKIFSEVTPKCEDCQSLVKPDIVFFGESLPARFFSCMQSDFLKVDL 256

Query:   199 LLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSLV 244
             LL+MGTSL VQPF SL+ K  +  P+  LL+    +    PF  ++
Sbjct:   257 LLVMGTSLQVQPFASLISKAPLSTPR--LLINKEKAGQSDPFLGMI 300

GO:0007067 "mitosis" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0006471 "protein ADP-ribosylation" evidence=NAS;TAS

GO:0016458 "gene silencing" evidence=NAS

GO:0017136 "NAD-dependent histone deacetylase activity" evidence=IDA

GO:0007096 "regulation of exit from mitosis" evidence=NAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0043130 "ubiquitin binding" evidence=IDA

GO:0005874 "microtubule" evidence=IDA

GO:0042826 "histone deacetylase binding" evidence=IPI

GO:0042903 "tubulin deacetylase activity" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0051775 "response to redox state" evidence=NAS

GO:0035035 "histone acetyltransferase binding" evidence=IPI

GO:0005677 "chromatin silencing complex" evidence=NAS

GO:0006348 "chromatin silencing at telomere" evidence=NAS

GO:0006342 "chromatin silencing" evidence=NAS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0000183 "chromatin silencing at rDNA" evidence=NAS

GO:0008134 "transcription factor binding" evidence=IPI

GO:0042325 "regulation of phosphorylation" evidence=NAS

GO:0016575 "histone deacetylation" evidence=TAS

GO:0045843 "negative regulation of striated muscle tissue development" evidence=IDA

GO:0070403 "NAD+ binding" evidence=IDA

GO:0033558 "protein deacetylase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006476 "protein deacetylation" evidence=IDA

GO:0043161 "proteasomal ubiquitin-dependent protein catabolic process" evidence=IMP

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=TAS

UNIPROTKB|Q5RBF1 SIRT2 "NAD-dependent protein deacetylase sirtuin-2" [Pongo abelii (taxid:9601)]

 Score = 452 (164.2 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
 Identities = 88/166 (53%), Positives = 113/166 (68%)

Query:    81 QVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCL 140
             ++Y G FKPT CHYF           R +TQNID LERIAGL  + LVEAHG+F+TSHC+
Sbjct:   100 ELYPGQFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSHCV 159

Query:   141 T--CRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADL 198
             +  CR +Y ++WMKE+IF+EV P CE C  LVKPDIVFFGE+LP+R+F  +  DF K DL
Sbjct:   160 SASCRHEYPLSWMKEKIFSEVTPKCEDCQSLVKPDIVFFGESLPARFFSCMQSDFLKVDL 219

Query:   199 LLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSLV 244
             LL+MGTSL VQPF SL+ K  +  P+  LL+    +    PF  ++
Sbjct:   220 LLVMGTSLQVQPFASLISKAPLSTPR--LLINKEKAGQSDPFLGMI 263

GO:0005737 "cytoplasm" evidence=ISS

GO:0043161 "proteasomal ubiquitin-dependent protein catabolic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5RJQ4	SIR2_RAT	3, ., 5, ., 1, ., -	0.5605	0.3866	0.5457	yes	N/A
Q9I7I7	SIRT2_DROME	3, ., 5, ., 1, ., -	0.5132	0.4676	0.6507	yes	N/A
Q8IXJ6	SIR2_HUMAN	3, ., 5, ., 1, ., -	0.5695	0.3866	0.4910	yes	N/A
Q7ZVK3	SIR2_DANRE	3, ., 5, ., 1, ., -	0.5515	0.3866	0.5039	yes	N/A
Q8VDQ8	SIR2_MOUSE	3, ., 5, ., 1, ., -	0.5439	0.4149	0.5269	yes	N/A
Q5RBF1	SIR2_PONAB	3, ., 5, ., 1, ., -	0.5695	0.3866	0.5426	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.5.1	0.691

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	494
cd01408	235	cd01408, SIRT1, SIRT1: Eukaryotic group (class1) w	1e-104
cd01407	218	cd01407, SIR2-fam, SIR2 family of proteins include	1e-67
pfam02146	177	pfam02146, SIR2, Sir2 family	1e-64
cd00296	222	cd00296, SIR2, SIR2 superfamily of proteins includ	1e-61
PTZ00410	349	PTZ00410, PTZ00410, NAD-dependent SIR2; Provisiona	1e-56
COG0846	250	COG0846, SIR2, NAD-dependent protein deacetylases,	9e-44
cd01413	222	cd01413, SIR2_Af2, SIR2_Af2: Archaeal and prokaryo	4e-40
PRK14138	244	PRK14138, PRK14138, NAD-dependent deacetylase; Pro	5e-38
PRK00481	242	PRK00481, PRK00481, NAD-dependent deacetylase; Pro	2e-36
cd01411	225	cd01411, SIR2H, SIR2H: Uncharacterized prokaryotic	2e-30
cd01410	206	cd01410, SIRT7, SIRT7: Eukaryotic and prokaryotic	7e-27
cd01412	224	cd01412, SIRT5_Af1_CobB, SIRT5_Af1_CobB: Eukaryoti	1e-24
cd01408	235	cd01408, SIRT1, SIRT1: Eukaryotic group (class1) w	2e-22
cd01409	260	cd01409, SIRT4, SIRT4: Eukaryotic and prokaryotic	5e-20
PTZ00409	271	PTZ00409, PTZ00409, Sir2 (Silent Information Regul	2e-16
PRK05333	285	PRK05333, PRK05333, NAD-dependent deacetylase; Pro	2e-15
PTZ00410	349	PTZ00410, PTZ00410, NAD-dependent SIR2; Provisiona	2e-09
cd01407	218	cd01407, SIR2-fam, SIR2 family of proteins include	6e-09
cd00296	222	cd00296, SIR2, SIR2 superfamily of proteins includ	6e-09
pfam02146	177	pfam02146, SIR2, Sir2 family	1e-08
cd01410	206	cd01410, SIRT7, SIRT7: Eukaryotic and prokaryotic	2e-07
PTZ00408	242	PTZ00408, PTZ00408, NAD-dependent deacetylase; Pro	9e-07
COG0846	250	COG0846, SIR2, NAD-dependent protein deacetylases,	2e-04
cd01413	222	cd01413, SIR2_Af2, SIR2_Af2: Archaeal and prokaryo	0.004

>gnl|CDD|238699 cd01408, SIRT1, SIRT1: Eukaryotic group (class1) which includes human sirtuins SIRT1-3 and yeast Hst1-4; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation

 Score =  311 bits (798), Expect = e-104
 Identities = 115/227 (50%), Positives = 151/227 (66%), Gaps = 33/227 (14%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSPG+GLY NL +Y LP+P A+F++ YF+  P  FY LAKELYPG FKP+  H
Sbjct: 14  SAGIPDFRSPGTGLYANLARYNLPYPEAMFDISYFRKNPRPFYALAKELYPGQFKPSVAH 73

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
           YF+KLL  K LLLR++TQ                              NID LER+AG+P
Sbjct: 74  YFIKLLEDKGLLLRNYTQ------------------------------NIDTLERVAGVP 103

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPS 183
           DD+++EAHGSF T+HC+ C+  Y   WM+E IF + +P C +C GLVKPDIVFFGE+LPS
Sbjct: 104 DDRIIEAHGSFATAHCIKCKHKYPGDWMREDIFNQEVPKCPRCGGLVKPDIVFFGESLPS 163

Query: 184 RYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLI 230
           R+F  ++ D  +ADLL+++GTSL V PF SL  +V  + P+   +LI
Sbjct: 164 RFFSHMEEDKEEADLLIVIGTSLKVAPFASLPSRVPSEVPR---VLI 207

Sir2 proteins have been shown to regulate gene silencing, DNA repair, and life span. The most-studied function, gene silencing, involves the inactivation of chromosome domains containing key regulatory genes by packaging them into a specialized chromatin structure that is inaccessible to DNA-binding proteins. The nuclear SIRT1 has been shown to target the p53 tumor suppressor protein for deacetylation to suppress DNA damage, and the cytoplasmic SIRT2 homolog has been shown to target alpha-tubulin for deacetylation for the maintenance of cell integrity. Length = 235

>gnl|CDD|238698 cd01407, SIR2-fam, SIR2 family of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose

 Score =  216 bits (552), Expect = 1e-67
 Identities = 75/215 (34%), Positives = 100/215 (46%), Gaps = 38/215 (17%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
            +GIPDFRSPG GL+  L+  +L      F  + F+  PE F+   +E            
Sbjct: 14  ESGIPDFRSPG-GLWARLDPEELA-----FSPEAFRRDPELFWGFYRERR---------- 57

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                              Y  + +P P H  L  L +K  L R  TQN+D L + AG P
Sbjct: 58  -------------------YPLNAQPNPAHRALAELERKGKLKRVITQNVDGLHQRAGSP 98

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPS 183
             K++E HGS     C  C K+Y    ++  I  E +P C KC GL++PD+VFFGE+LP 
Sbjct: 99  --KVIELHGSLFRVRCTKCGKEYPRDELQADIDREEVPRCPKCGGLLRPDVVFFGESLPE 156

Query: 184 RYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKV 218
                      KADLLL++GTSL V P   L    
Sbjct: 157 E-LDEAAEALAKADLLLVIGTSLQVYPAAGLPLYA 190

Sir2 proteins, also known as sirtuins, are found in all eukaryotes and many archaea and prokaryotes and have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. The most-studied function, gene silencing, involves the inactivation of chromosome domains containing key regulatory genes by packaging them into a specialized chromatin structure that is inaccessible to DNA-binding proteins. The oligomerization state of Sir2 appears to be organism-dependent, sometimes occurring as a monomer and sometimes as a multimer. Length = 218

>gnl|CDD|216902 pfam02146, SIR2, Sir2 family

 Score =  206 bits (527), Expect = 1e-64
 Identities = 89/207 (42%), Positives = 110/207 (53%), Gaps = 36/207 (17%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
            +GIPDFRS   GLY  L K +L  P A F   Y    P  FY +A+EL PG  +P P H
Sbjct: 7   ESGIPDFRSDD-GLYAKLAKEELASPEAFFSNPYLVWDP--FYNIARELLPGPAQPNPAH 63

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
           YF+  L +                              K  LLR  TQNID L   AG  
Sbjct: 64  YFIAEL-ED-----------------------------KGKLLRLITQNIDGLHERAGSK 93

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPS 183
             K+VE HGSF  + C++C K Y+   + ERI A  +P C+KC GL+KPDIVFFGENLP 
Sbjct: 94  --KVVELHGSFAKARCVSCHKKYTGETLPERIDAAKVPKCDKCGGLLKPDIVFFGENLPD 151

Query: 184 RYFHRVDVDFPKADLLLIMGTSLVVQP 210
           + F R   D  +ADLL+++GTSL V P
Sbjct: 152 K-FFRAYEDVEEADLLIVIGTSLKVYP 177

This region is characteristic of Silent information regulator 2 (Sir2) proteins, or sirtuins. These are protein deacetylases that depend on nicotine adenine dinucleotide (NAD). They are found in many subcellular locations, including the nucleus, cytoplasm and mitochondria. Eukaryotic forms play in important role in the regulation of transcriptional repression. Moreover, they are involved in microtubule organisation and DNA damage repair processes. Length = 177

>gnl|CDD|238184 cd00296, SIR2, SIR2 superfamily of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose

 Score =  201 bits (512), Expect = 1e-61
 Identities = 72/215 (33%), Positives = 99/215 (46%), Gaps = 36/215 (16%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
            +GIPDFR  G+GL+  L+  +L      F  + F+  PE F+   KE            
Sbjct: 14  ESGIPDFRGLGTGLWTRLDPEELA-----FSPEAFRRDPELFWLFYKERRYTPLD----- 63

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                   KP P H  L  L +K  L R  TQN+D L   AG  
Sbjct: 64  -----------------------AKPNPAHRALAELERKGKLKRIITQNVDGLHERAGSR 100

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPS 183
            ++++E HGS     C +C K+Y    + ER   E  P C KC GL++PD+V FGE LP 
Sbjct: 101 RNRVIELHGSLDRVRCTSCGKEYPRDEVLER---EKPPRCPKCGGLLRPDVVDFGEALPK 157

Query: 184 RYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKV 218
            +F R      +ADL+L++GTSL V P   L+ + 
Sbjct: 158 EWFDRALEALLEADLVLVIGTSLTVYPAARLLLRA 192

Sir2 proteins, also known as sirtuins, are found in all eukaryotes and many archaea and prokaryotes and have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. The most-studied function, gene silencing, involves the inactivation of chromosome domains containing key regulatory genes by packaging them into a specialized chromatin structure that is inaccessible to DNA-binding proteins. The oligomerization state of Sir2 appears to be organism-dependent, sometimes occurring as a monomer and sometimes as a multimer. Also included in this superfamily is a group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines. Length = 222

>gnl|CDD|185600 PTZ00410, PTZ00410, NAD-dependent SIR2; Provisional

 Score =  192 bits (488), Expect = 1e-56
 Identities = 97/223 (43%), Positives = 124/223 (55%), Gaps = 33/223 (14%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKE--LYPGSFKPTP 61
           AAGIPDFRSP +G+Y  L KY L  P   F L   + +PE FY++A+E  L+PG F+PT 
Sbjct: 43  AAGIPDFRSPHTGIYAKLGKYNLNSPTDAFSLTLLREKPEVFYSIAREMDLWPGHFQPTA 102

Query: 62  CHYFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAG 121
            H+F++LL  +  LLR              C                 TQNID LER AG
Sbjct: 103 VHHFIRLLADEGRLLR--------------C----------------CTQNIDGLERAAG 132

Query: 122 LPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENL 181
           +P   LVEAHGSF  + C+ C   Y +        +  +P C  C G+VKPD+VFFGENL
Sbjct: 133 VPPSLLVEAHGSFSAASCIECHTPYDIEQAYLEARSGKVPHCSTCGGIVKPDVVFFGENL 192

Query: 182 PSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK 224
           P  +F+ V  D P+A+LLLI+GTSL V PF  L   V  D P+
Sbjct: 193 PDAFFN-VHHDIPEAELLLIIGTSLQVHPFALLACVVPKDVPR 234

Length = 349

>gnl|CDD|223915 COG0846, SIR2, NAD-dependent protein deacetylases, SIR2 family [Transcription]

 Score =  154 bits (392), Expect = 9e-44
 Identities = 70/243 (28%), Positives = 99/243 (40%), Gaps = 42/243 (17%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
            +GIPDFRS   GL+ +  KY    P  +     F+  PE  +    E     +      
Sbjct: 26  ESGIPDFRSKD-GLWSD--KYD---PEDLASPSGFRRDPELVWDFYSERLRLLY------ 73

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                   +P   HY L  L  K  LLR  TQNID L   AG  
Sbjct: 74  ----------------------LAQPNKAHYALAELEDKGKLLRIITQNIDGLHERAGS- 110

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNG-LVKPDIVFFGENLP 182
              ++E HGS     C  C   Y    + + I   +IP C KC G +++PD+V+FGE LP
Sbjct: 111 -KNVIELHGSLKRVRCSKCGNQYYDEDVIKFIEDGLIPRCPKCGGPVLRPDVVWFGEPLP 169

Query: 183 SRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCS 242
           + +         +ADLL+++GTSL V P   L +        A ++ I   +L       
Sbjct: 170 ASFLDEALEALKEADLLIVIGTSLKVYPAAGLPE--LAKRRGAKVIEI---NLEPTRLDP 224

Query: 243 LVD 245
           + D
Sbjct: 225 IAD 227

Length = 250

>gnl|CDD|238704 cd01413, SIR2_Af2, SIR2_Af2: Archaeal and prokaryotic group which includes Archaeoglobus fulgidus Sir2-Af2, Sulfolobus solfataricus ssSir2, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation

 Score =  144 bits (364), Expect = 4e-40
 Identities = 69/208 (33%), Positives = 100/208 (48%), Gaps = 40/208 (19%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
            +GIPDFRSP  GL+      K   P  +  +DYF   PE F+   KE            
Sbjct: 18  ESGIPDFRSPD-GLW------KKYDPEEVASIDYFYRNPEEFWRFYKE------------ 58

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
             +  L +                +P   HYFL  L ++ ++    TQNID L + AG  
Sbjct: 59  -IILGLLEA---------------QPNKAHYFLAELEKQGIIKAIITQNIDGLHQRAG-- 100

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPS 183
              ++E HG+  T++C+ C   Y +  +K     EV P C KC G+++PD+V FGE LP 
Sbjct: 101 SKNVIELHGTLQTAYCVNCGSKYDLEEVKYAKKHEV-PRCPKCGGIIRPDVVLFGEPLPQ 159

Query: 184 RYFHRVDVDFPK-ADLLLIMGTSLVVQP 210
               R  ++  K ADL +++G+SLVV P
Sbjct: 160 A-LLREAIEAAKEADLFIVLGSSLVVYP 186

Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. The Sir2 homolog from the archaea Sulfolobus solftaricus deacetylates the non-specific DNA protein Alba to mediate transcription repression. Length = 222

>gnl|CDD|172627 PRK14138, PRK14138, NAD-dependent deacetylase; Provisional

 Score =  139 bits (351), Expect = 5e-38
 Identities = 72/208 (34%), Positives = 105/208 (50%), Gaps = 40/208 (19%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKE-LYPGSFKPTPC 62
            +GIPDFR P  G+Y   +KY    P  +F++D+F   PE FY  AKE ++P        
Sbjct: 25  PSGIPDFRGP-QGIY---KKY----PQNVFDIDFFYSHPEEFYRFAKEGIFP-------- 68

Query: 63  HYFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGL 122
                 + +                KP   H  L  L +K L+    TQNID L + AG 
Sbjct: 69  ------MLEA---------------KPNLAHVLLAKLEEKGLIEAVITQNIDRLHQKAG- 106

Query: 123 PDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLP 182
              K++E HG+    +C+ C K Y+V  + E++    +P C+ C+GL++P+IVFFGE LP
Sbjct: 107 -SKKVIELHGNVEEYYCVRCGKRYTVEDVIEKLEKSDVPRCDDCSGLIRPNIVFFGEALP 165

Query: 183 SRYFHRVDVDFPKADLLLIMGTSLVVQP 210
                       KA L+++MG+SLVV P
Sbjct: 166 QDALREAIRLSSKASLMIVMGSSLVVYP 193

Length = 244

>gnl|CDD|234777 PRK00481, PRK00481, NAD-dependent deacetylase; Provisional

 Score =  134 bits (340), Expect = 2e-36
 Identities = 61/225 (27%), Positives = 87/225 (38%), Gaps = 43/225 (19%)

Query: 6   GIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYF 65
           GIPDFRS   GL++         P  +   + F   PE  +                 ++
Sbjct: 29  GIPDFRSAN-GLWEEH------RPEDVASPEGFARDPELVW----------------KFY 65

Query: 66  LKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDD 125
            +   Q                KP   H  L  L +   L+   TQNID L   AG    
Sbjct: 66  NERRRQLL------------DAKPNAAHRALAELEKLGKLVTVITQNIDGLHERAG--SK 111

Query: 126 KLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRY 185
            ++E HGS   + C  C + Y +    +       P C KC G+++PD+V FGE LP   
Sbjct: 112 NVIELHGSLLRARCTKCGQTYDL----DEYLKPEPPRCPKCGGILRPDVVLFGEMLPELA 167

Query: 186 FHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLI 230
                    +ADL +++GTSLVV P   L    +     A  + I
Sbjct: 168 IDEAYEALEEADLFIVIGTSLVVYPAAGLPY--EAREHGAKTVEI 210

Length = 242

>gnl|CDD|238702 cd01411, SIR2H, SIR2H: Uncharacterized prokaryotic Sir2 homologs from several gram positive bacterial species and Fusobacteria; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation

 Score =  117 bits (295), Expect = 2e-30
 Identities = 70/234 (29%), Positives = 95/234 (40%), Gaps = 49/234 (20%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKE--LYPGSFKPTP 61
           A+GIPD+RS   GLY+ + KY    P  +   D+ +  PE FY   KE   +P +     
Sbjct: 22  ASGIPDYRSKN-GLYNEIYKYS---PEYLLSHDFLEREPEKFYQFVKENLYFPDA----- 72

Query: 62  CHYFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAG 121
                                     KP   H  +  L +  L     TQNID L + AG
Sbjct: 73  --------------------------KPNIIHQKMAELEKMGLK-AVITQNIDGLHQKAG 105

Query: 122 LPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENL 181
                +VE HGS +  +C  C K        +       P   KC G+++PDIV + E L
Sbjct: 106 --SKNVVEFHGSLYRIYCTVCGKTVDWEEYLK------SPYHAKCGGVIRPDIVLYEEML 157

Query: 182 PSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSL 235
                        KADLL+I+GTS VV PF  L+D        A+L+ I     
Sbjct: 158 NESVIEEAIQAIEKADLLVIVGTSFVVYPFAGLIDYR---QAGANLIAINKEPT 208

Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. Length = 225

>gnl|CDD|238701 cd01410, SIRT7, SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation

 Score =  107 bits (269), Expect = 7e-27
 Identities = 47/131 (35%), Positives = 62/131 (47%), Gaps = 1/131 (0%)

Query: 89  PTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSV 148
           PT  H  L  L +  LL    +QN+D L   +GLP +KL E HG+     C +C  +Y  
Sbjct: 48  PTLTHMALVELERAGLLKFVISQNVDGLHLRSGLPREKLSELHGNMFIEVCKSCGPEYVR 107

Query: 149 AWMKERIFA-EVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLV 207
             + E     E    C  C G++K  IV FGE LP   +        +ADL L +GTSL 
Sbjct: 108 DDVVETRGDKETGRRCHACGGILKDTIVDFGERLPPENWMGAAAAACRADLFLCLGTSLQ 167

Query: 208 VQPFCSLVDKV 218
           V P  +L  K 
Sbjct: 168 VTPAANLPLKA 178

Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. Length = 206

>gnl|CDD|238703 cd01412, SIRT5_Af1_CobB, SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E

 Score =  101 bits (253), Expect = 1e-24
 Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 8/132 (6%)

Query: 88  KPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTC-RKDY 146
           +P P H  L  L ++   +   TQN+D L   AG     ++E HGS     C +C     
Sbjct: 63  QPNPAHLALAELERRLPNVLLITQNVDGLHERAG--SRNVIELHGSLFRVRCSSCGYVGE 120

Query: 147 SVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSL 206
           +   + E    E +P C KC GL++P +V+FGE+LP      V+    KADL L++GTS 
Sbjct: 121 NNEEIPE----EELPRCPKCGGLLRPGVVWFGESLPLALLEAVEA-LAKADLFLVIGTSG 175

Query: 207 VVQPFCSLVDKV 218
           VV P   L ++ 
Sbjct: 176 VVYPAAGLPEEA 187

coli CobB; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. CobB is a bacterial sirtuin that deacetylates acetyl-CoA synthetase at an active site lysine to stimulate its enzymatic activity. . Length = 224

>gnl|CDD|238699 cd01408, SIRT1, SIRT1: Eukaryotic group (class1) which includes human sirtuins SIRT1-3 and yeast Hst1-4; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation

 Score = 95.8 bits (239), Expect = 2e-22
 Identities = 52/165 (31%), Positives = 71/165 (43%), Gaps = 46/165 (27%)

Query: 256 NIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRM----------- 304
           NID LER+AG+PDD+++EAHGSF T+HC+ C+  Y   WM+E      +           
Sbjct: 92  NIDTLERVAGVPDDRIIEAHGSFATAHCIKCKHKYPGDWMREDIFNQEVPKCPRCGGLVK 151

Query: 305 -GITL---GLHAGGLSSIPGGAEVFSALCLEFG----VHSAS-----APPHCPRLLINKE 351
             I      L +   S +    E    L +  G    V   +      P   PR+LIN+E
Sbjct: 152 PDIVFFGESLPSRFFSHMEEDKEEAD-LLIVIGTSLKVAPFASLPSRVPSEVPRVLINRE 210

Query: 352 KVG-VGSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKL 395
            VG +G R                      DV L GDCD G ++L
Sbjct: 211 PVGHLGKRP--------------------FDVALLGDCDDGVREL 235

Sir2 proteins have been shown to regulate gene silencing, DNA repair, and life span. The most-studied function, gene silencing, involves the inactivation of chromosome domains containing key regulatory genes by packaging them into a specialized chromatin structure that is inaccessible to DNA-binding proteins. The nuclear SIRT1 has been shown to target the p53 tumor suppressor protein for deacetylation to suppress DNA damage, and the cytoplasmic SIRT2 homolog has been shown to target alpha-tubulin for deacetylation for the maintenance of cell integrity. Length = 235

>gnl|CDD|238700 cd01409, SIRT4, SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation

 Score = 89.3 bits (222), Expect = 5e-20
 Identities = 67/243 (27%), Positives = 93/243 (38%), Gaps = 89/243 (36%)

Query: 6   GIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYF 65
           GIPD+RS G                                     LY  +F+P      
Sbjct: 24  GIPDYRSEGG------------------------------------LYSRTFRP------ 41

Query: 66  LKLLHQKNLLLRHFTQVYW----------GSFKPTPCHYFLKLLHQKNLLLRHFTQNIDN 115
             + HQ+ +      Q YW           + +P   H  L  L     L    TQN+D 
Sbjct: 42  --MTHQEFMRSPAARQRYWARSFVGWPRFSAAQPNAAHRALAALEAAGRLHGLITQNVDG 99

Query: 116 LERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERI------FAEV---------- 159
           L   AG     +VE HGS H   CL+C      A +++R+      FAE           
Sbjct: 100 LHTKAG--SRNVVELHGSLHRVVCLSCGFRTPRAELQDRLEALNPGFAEQAAGQAPDGDV 157

Query: 160 -----------IPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPK---ADLLLIMGTS 205
                      +P CE+C G++KPD+VFFGEN+P     RV     +   AD LL++G+S
Sbjct: 158 DLEDEQVAGFRVPECERCGGVLKPDVVFFGENVPR---DRVVTAAARLAEADALLVLGSS 214

Query: 206 LVV 208
           L+V
Sbjct: 215 LMV 217

Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. Length = 260

>gnl|CDD|173599 PTZ00409, PTZ00409, Sir2 (Silent Information Regulator) protein; Provisional

 Score = 78.8 bits (194), Expect = 2e-16
 Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 40/213 (18%)

Query: 5   AGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHY 64
           + IP FR P S ++                    K+ P+ + T+                
Sbjct: 43  SNIPSFRGPSSSIWS-------------------KYDPKIYGTIWG-------------- 69

Query: 65  FLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPD 124
           F K   +   ++R  +  Y    +  P H  L  L     L    TQN+D L   +G  +
Sbjct: 70  FWKYPEKIWEVIRDISSDY--EIELNPGHVALSTLESLGYLKFVVTQNVDGLHEESG--N 125

Query: 125 DKLVEAHGSFHTSHCLTCRKDY---SVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENL 181
            K++  HGS   + C TCRK      +   K   F   +P    C G+ KP+++ FGE +
Sbjct: 126 TKVIPLHGSVFEARCCTCRKTIQLNKIMLQKTSHFMHQLPPECPCGGIFKPNVILFGEVI 185

Query: 182 PSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSL 214
           P     + + +  K DLLL++GTS  V    +L
Sbjct: 186 PKSLLKQAEKEIDKCDLLLVVGTSSSVSTATNL 218

Length = 271

>gnl|CDD|235415 PRK05333, PRK05333, NAD-dependent deacetylase; Provisional

 Score = 75.9 bits (187), Expect = 2e-15
 Identities = 44/165 (26%), Positives = 67/165 (40%), Gaps = 39/165 (23%)

Query: 81  QVYW----------GSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEA 130
           + YW          G  +P   H+ L  L     + R  TQN+D L + AG  D  ++E 
Sbjct: 65  RRYWARSMVGWPVFGRAQPNAAHHALARLGAAGRIERLVTQNVDGLHQRAGSRD--VIEL 122

Query: 131 HGSFHTSHCLTCRKDYSVAWMKERIFAE---------------------------VIPTC 163
           HG      C+ C   +  A ++  + A                             +P C
Sbjct: 123 HGRLDGVRCMGCGARHPRAEIQHVLEAANPEWLALEAAPAPDGDADLEWAAFDHFRVPAC 182

Query: 164 EKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVV 208
             C G++KPD+VFFGEN+P             AD +L++G+SL+V
Sbjct: 183 PACGGILKPDVVFFGENVPRERVAAARAALDAADAVLVVGSSLMV 227

Length = 285

>gnl|CDD|185600 PTZ00410, PTZ00410, NAD-dependent SIR2; Provisional

 Score = 58.7 bits (142), Expect = 2e-09
 Identities = 59/229 (25%), Positives = 81/229 (35%), Gaps = 60/229 (26%)

Query: 254 SDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGL--H 311
           + NID LER AG+P   LVEAHGSF  + C+ C   Y +    E   L      +     
Sbjct: 121 TQNIDGLERAAGVPPSLLVEAHGSFSAASCIECHTPYDI----EQAYLEARSGKVPHCST 176

Query: 312 AGGL---------SSIPGG----------AEVFSALCLEFGVH-----SASAPPHCPRLL 347
            GG+          ++P            AE+   +     VH     +   P   PR+L
Sbjct: 177 CGGIVKPDVVFFGENLPDAFFNVHHDIPEAELLLIIGTSLQVHPFALLACVVPKDVPRVL 236

Query: 348 INKEKVGVGSRNPLMGLLGLSEGLGFDNENNVRD--VFLEGDCDSGCQKLADML------ 399
            N E+VG           GL      D         V  EG   S   + +         
Sbjct: 237 FNLERVG-----------GLMFRFPTDPLTTFHADSVAKEGRSSSSSSRSSSDSSTSSSS 285

Query: 400 -GWGIPLMGLLGLSEGLGFDNENNV-RDVFLEGDCDSGCQKLADMLGWG 446
            G+G           G    +   V RD+F  GDC    ++LA+ LG G
Sbjct: 286 DGYG---------QFGDYEADPGGVCRDIFFPGDCQESVRRLAEALGLG 325

Length = 349

>gnl|CDD|238698 cd01407, SIR2-fam, SIR2 family of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose

 Score = 56.0 bits (136), Expect = 6e-09
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 256 NIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKE 297
           N+D L + AG P  K++E HGS     C  C K+Y    ++ 
Sbjct: 87  NVDGLHQRAGSP--KVIELHGSLFRVRCTKCGKEYPRDELQA 126

Sir2 proteins, also known as sirtuins, are found in all eukaryotes and many archaea and prokaryotes and have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. The most-studied function, gene silencing, involves the inactivation of chromosome domains containing key regulatory genes by packaging them into a specialized chromatin structure that is inaccessible to DNA-binding proteins. The oligomerization state of Sir2 appears to be organism-dependent, sometimes occurring as a monomer and sometimes as a multimer. Length = 218

>gnl|CDD|238184 cd00296, SIR2, SIR2 superfamily of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose

 Score = 56.2 bits (136), Expect = 6e-09
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 256 NIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKE 297
           N+D L   AG   ++++E HGS     C +C K+Y    + E
Sbjct: 89  NVDGLHERAGSRRNRVIELHGSLDRVRCTSCGKEYPRDEVLE 130

Sir2 proteins, also known as sirtuins, are found in all eukaryotes and many archaea and prokaryotes and have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. The most-studied function, gene silencing, involves the inactivation of chromosome domains containing key regulatory genes by packaging them into a specialized chromatin structure that is inaccessible to DNA-binding proteins. The oligomerization state of Sir2 appears to be organism-dependent, sometimes occurring as a monomer and sometimes as a multimer. Also included in this superfamily is a group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines. Length = 222

>gnl|CDD|216902 pfam02146, SIR2, Sir2 family

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 256 NIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKE 297
           NID L   AG    K+VE HGSF  + C++C K Y+   + E
Sbjct: 82  NIDGLHERAGSK--KVVELHGSFAKARCVSCHKKYTGETLPE 121

This region is characteristic of Silent information regulator 2 (Sir2) proteins, or sirtuins. These are protein deacetylases that depend on nicotine adenine dinucleotide (NAD). They are found in many subcellular locations, including the nucleus, cytoplasm and mitochondria. Eukaryotic forms play in important role in the regulation of transcriptional repression. Moreover, they are involved in microtubule organisation and DNA damage repair processes. Length = 177

>gnl|CDD|238701 cd01410, SIRT7, SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 9/61 (14%)

Query: 254 SDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAG 313
           S N+D L   +GLP +KL E HG+     C +C  +Y    + E         T G    
Sbjct: 69  SQNVDGLHLRSGLPREKLSELHGNMFIEVCKSCGPEYVRDDVVE---------TRGDKET 119

Query: 314 G 314
           G
Sbjct: 120 G 120

Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. Length = 206

>gnl|CDD|240405 PTZ00408, PTZ00408, NAD-dependent deacetylase; Provisional

 Score = 49.8 bits (119), Expect = 9e-07
 Identities = 53/214 (24%), Positives = 78/214 (36%), Gaps = 43/214 (20%)

Query: 5   AGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYT-LAKELYPGSFKPTPCH 63
           +GI  FR  G+GL++N     +  P A         R   FY    + L   S KP   H
Sbjct: 19  SGISTFRD-GNGLWENHRVEDVATPDAFLRNPALVQR---FYNERRRALLSSSVKPNKAH 74

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
           + L  L ++          Y G                    +   TQN+DNL   AG  
Sbjct: 75  FALAKLERE----------YRGGK------------------VVVVTQNVDNLHERAG-- 104

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKC--NGLVKPDIVFFGENL 181
              ++  HG      C      +   W ++ +       C+ C   G ++P IV+FGE  
Sbjct: 105 STHVLHMHGELLKVRCTATGHVFD--WTEDVVHGS--SRCKCCGCVGTLRPHIVWFGE-- 158

Query: 182 PSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLV 215
              Y   ++    K DL + +GTS  V P    V
Sbjct: 159 MPLYMDEIESVMSKTDLFVAVGTSGNVYPAAGFV 192

Length = 242

>gnl|CDD|223915 COG0846, SIR2, NAD-dependent protein deacetylases, SIR2 family [Transcription]

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 2/31 (6%)

Query: 256 NIDNLERIAGLPDDKLVEAHGSFHTSHCLTC 286
           NID L   AG     ++E HGS     C  C
Sbjct: 100 NIDGLHERAGS--KNVIELHGSLKRVRCSKC 128

Length = 250

>gnl|CDD|238704 cd01413, SIR2_Af2, SIR2_Af2: Archaeal and prokaryotic group which includes Archaeoglobus fulgidus Sir2-Af2, Sulfolobus solfataricus ssSir2, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation

 Score = 38.5 bits (90), Expect = 0.004
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 256 NIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMK 296
           NID L + AG     ++E HG+  T++C+ C   Y +  +K
Sbjct: 91  NIDGLHQRAG--SKNVIELHGTLQTAYCVNCGSKYDLEEVK 129

Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. The Sir2 homolog from the archaea Sulfolobus solftaricus deacetylates the non-specific DNA protein Alba to mediate transcription repression. Length = 222

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	494
KOG2682|consensus	314		100.0
PTZ00410	349	NAD-dependent SIR2; Provisional	100.0
cd01408	235	SIRT1 SIRT1: Eukaryotic group (class1) which inclu	100.0
cd01413	222	SIR2_Af2 SIR2_Af2: Archaeal and prokaryotic group	100.0
COG0846	250	SIR2 NAD-dependent protein deacetylases, SIR2 fami	100.0
PTZ00409	271	Sir2 (Silent Information Regulator) protein; Provi	100.0
PRK14138	244	NAD-dependent deacetylase; Provisional	100.0
cd01409	260	SIRT4 SIRT4: Eukaryotic and prokaryotic group (cla	100.0
cd01410	206	SIRT7 SIRT7: Eukaryotic and prokaryotic group (cla	100.0
cd01407	218	SIR2-fam SIR2 family of proteins includes silent i	100.0
cd01411	225	SIR2H SIR2H: Uncharacterized prokaryotic Sir2 homo	100.0
cd01412	224	SIRT5_Af1_CobB SIRT5_Af1_CobB: Eukaryotic, archaea	100.0
PTZ00408	242	NAD-dependent deacetylase; Provisional	100.0
PRK00481	242	NAD-dependent deacetylase; Provisional	100.0
PF02146	178	SIR2: Sir2 family; InterPro: IPR003000 These seque	100.0
PRK05333	285	NAD-dependent deacetylase; Provisional	100.0
cd00296	222	SIR2 SIR2 superfamily of proteins includes silent	100.0
KOG2684|consensus	412		100.0
PTZ00410	349	NAD-dependent SIR2; Provisional	100.0
KOG2683|consensus	305		100.0
KOG2684|consensus	412		100.0
KOG1905|consensus	353		100.0
KOG2682|consensus	314		99.97
PRK14138	244	NAD-dependent deacetylase; Provisional	99.96
cd01408	235	SIRT1 SIRT1: Eukaryotic group (class1) which inclu	99.96
cd01409	260	SIRT4 SIRT4: Eukaryotic and prokaryotic group (cla	99.96
cd01410	206	SIRT7 SIRT7: Eukaryotic and prokaryotic group (cla	99.96
COG0846	250	SIR2 NAD-dependent protein deacetylases, SIR2 fami	99.96
PRK05333	285	NAD-dependent deacetylase; Provisional	99.95
PTZ00409	271	Sir2 (Silent Information Regulator) protein; Provi	99.95
PTZ00408	242	NAD-dependent deacetylase; Provisional	99.95
cd01413	222	SIR2_Af2 SIR2_Af2: Archaeal and prokaryotic group	99.94
PRK00481	242	NAD-dependent deacetylase; Provisional	99.94
PF02146	178	SIR2: Sir2 family; InterPro: IPR003000 These seque	99.94
cd01412	224	SIRT5_Af1_CobB SIRT5_Af1_CobB: Eukaryotic, archaea	99.93
cd01411	225	SIR2H SIR2H: Uncharacterized prokaryotic Sir2 homo	99.93
cd01407	218	SIR2-fam SIR2 family of proteins includes silent i	99.93
cd00296	222	SIR2 SIR2 superfamily of proteins includes silent	99.89
KOG2683|consensus	305		99.84
KOG1905|consensus	353		99.82
cd01406	242	SIR2-like Sir2-like: Prokaryotic group of uncharac	97.85
PF13289	143	SIR2_2: SIR2-like domain	93.1
PF00205	137	TPP_enzyme_M: Thiamine pyrophosphate enzyme, centr	85.58
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	84.25
PF09723	42	Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR0134	81.28
PF07295	146	DUF1451: Protein of unknown function (DUF1451); In	80.97

>KOG2682|consensus

Probab=100.00  E-value=2.9e-66  Score=487.96  Aligned_cols=246  Identities=44%  Similarity=0.717  Sum_probs=219.4

Q ss_pred             cccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhcc
Q psy11832          2 FGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFTQ   81 (494)
Q Consensus         2 ~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~~   81 (494)
                      +|++|||||||+++|+|+|++++++|+||++|+.+||++||++||...+++|+++++||..||+++.             
T Consensus        48 STsaGIPDFRSP~tGlY~NLqr~~LPYpEAiFel~yF~~nP~PF~tLAkELyPgnfkPt~~HYflrL-------------  114 (314)
T KOG2682|consen   48 STSAGIPDFRSPGTGLYDNLQRYHLPYPEAIFELSYFKKNPEPFFTLAKELYPGNFKPTITHYFLRL-------------  114 (314)
T ss_pred             ccccCCCCCCCCCchhhhhHHHhcCCChhhhhccHHhhcCCchHHHHHHHhCCCCcCchhHHHHHHH-------------
Confidence            7999999999999999999999999999999999999999999999999999999999999999886             


Q ss_pred             cccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCCC
Q psy11832         82 VYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIP  161 (494)
Q Consensus        82 ~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~P  161 (494)
                                       |++                                                            
T Consensus       115 -----------------l~D------------------------------------------------------------  117 (314)
T KOG2682|consen  115 -----------------LHD------------------------------------------------------------  117 (314)
T ss_pred             -----------------Hcc------------------------------------------------------------
Confidence                             222                                                            


Q ss_pred             CCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccccccccc
Q psy11832        162 TCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFC  241 (494)
Q Consensus       162 ~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~~a  241 (494)
                                                                                                      
T Consensus       118 --------------------------------------------------------------------------------  117 (314)
T KOG2682|consen  118 --------------------------------------------------------------------------------  117 (314)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecC-CCCCccchHHHHhhhccCCCCCCccCCCCCCCCCCC
Q psy11832        242 SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCL-TCRKDYSVAWMKEGNLLGRMGITLGLHAGGLSSIPG  320 (494)
Q Consensus       242 ~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~-~C~~~y~~~~~~~~i~~~~~~~p~c~~C~g~~~i~~  320 (494)
                          ||.|+++||||||||||.||++.+.+|||||||+++||+ .|++.|+.+|||.+|+...+  |+|+.|+|   ++|
T Consensus       118 ----K~lL~r~YTQNIDtLER~aGv~d~~lvEAHGtFa~s~Ci~~C~~~yp~e~~ka~i~~~~v--pkC~vC~~---lVK  188 (314)
T KOG2682|consen  118 ----KGLLLRCYTQNIDTLERIAGVPDEDLVEAHGTFATSHCISSCRHEYPLEWMKAKIMSEVV--PKCEVCQG---LVK  188 (314)
T ss_pred             ----ccHHHHHHhccchHHHHhcCCCHHHHHHhccceeeeeehhhhcCcCCHHHHHHHHHhccC--CCCchhhc---ccc
Confidence                345567899999999999999999999999999999999 69999999999999987655  68899998   599


Q ss_pred             CcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhcccCCCCCCCCCCcccEEEeCChhHHHHHHHHH
Q psy11832        321 GAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADM  398 (494)
Q Consensus       321 p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~~g~~~~~~~~~~dl~i~g~~~~~~~~L~~~  398 (494)
                      |+|||  |+||.+|++....++..||++|||||||+|   +|||+|+...                    +.-+|||   
T Consensus       189 P~IVFfGE~LP~rF~e~~~~D~~~~dl~lV~GTSL~V---~PFAsLpe~v--------------------p~~v~Rl---  242 (314)
T KOG2682|consen  189 PDIVFFGESLPARFFECMQSDFLKVDLLLVMGTSLQV---QPFASLPEKV--------------------PLSVPRL---  242 (314)
T ss_pred             ccEEEecCCccHHHHHHHhhcccccceEEEeccceee---eecccchhhh--------------------hhcCcee---
Confidence            99999  789999999999999999999999999999   9999886311                    1122222   


Q ss_pred             hCCCchHHHhhcCccccCCCCCCCccceEEeCCcHHHHHHHHHHcCCchhhhhhhcccCCCCC
Q psy11832        399 LGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGF  461 (494)
Q Consensus       399 lg~~~~~~~l~~~~~~~~f~~~~~~~Dv~~lgdcD~~~~~l~~~lgW~~el~~l~~~~~~~~~  461 (494)
                               |+|++....|--..++|||+|+||||+||++|+++|||++||++|+..+.++--
T Consensus       243 ---------LiNre~~Gp~~~~~r~rDv~~lgd~d~~~eaLvelLGW~eele~lv~~e~~~ld  296 (314)
T KOG2682|consen  243 ---------LINREKAGPFLGMIRYRDVAWLGDCDQGVEALVELLGWKEELEDLVRREHGSLD  296 (314)
T ss_pred             ---------EecccccCccccCcccccchhhccHHHHHHHHHHHhCcHHHHHHHHHhhccccc
Confidence                     677777777777788999999999999999999999999999999998877643

>PTZ00410 NAD-dependent SIR2; Provisional

Probab=100.00  E-value=2.1e-60  Score=484.04  Aligned_cols=204  Identities=46%  Similarity=0.809  Sum_probs=180.5

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |+|+||||||||+++|+|+++.++++.+|+++|++++|++||+.||+|++.+..                          
T Consensus        40 ISteSGIPdFRs~~~Glw~~~~~~~~~~pe~~fs~~~f~~~P~~f~~~~r~~~~--------------------------   93 (349)
T PTZ00410         40 ISVAAGIPDFRSPHTGIYAKLGKYNLNSPTDAFSLTLLREKPEVFYSIAREMDL--------------------------   93 (349)
T ss_pred             cccccCCCcccCcCCCcCccccccCCCCHHHHcCHHHHHHCHHHHHHHHHHhhc--------------------------
Confidence            689999999999944999998777777899999999999999999999876421                          


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCC
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI  160 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~  160 (494)
                        +-..++||++|++|+.|+++|++.+||||||||||++||+++++|+|+||++++++|..|++.|+.++....+....+
T Consensus        94 --~~~~a~Pn~aH~aLa~Le~~G~l~~vITQNIDgLh~rAG~~~~~ViElHGsl~~~~C~~C~~~~~~~~~~~~~~~~~v  171 (349)
T PTZ00410         94 --WPGHFQPTAVHHFIRLLADEGRLLRCCTQNIDGLERAAGVPPSLLVEAHGSFSAASCIECHTPYDIEQAYLEARSGKV  171 (349)
T ss_pred             --ccCcCCCCHHHHHHHHHHhcCCcceEEecchhhhHhhcCCCcccEEEeccCCCeeEeCCCCCCcchhHHHHHhhcCCC
Confidence              012467888888888899999999999999999999999998999999999999999999999887766555555678


Q ss_pred             CCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccc
Q psy11832        161 PTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLV  236 (494)
Q Consensus       161 P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~  236 (494)
                      |+|+.|||.+||+||||||.+|+..++ +.+++++||++|||||||+|+|++.++..+   ..++++|+||.+++.
T Consensus       172 P~C~~CgG~lRPdVVlFGE~lp~~~~~-a~~~~~~aDllLVIGTSL~V~Paa~l~~~a---~~~~pvviIN~e~~~  243 (349)
T PTZ00410        172 PHCSTCGGIVKPDVVFFGENLPDAFFN-VHHDIPEAELLLIIGTSLQVHPFALLACVV---PKDVPRVLFNLERVG  243 (349)
T ss_pred             CCCCCCCCccCCcEEecCCcCCHHHHH-HHHHHHhCCEEEEECcCCcccCHHHHHHHH---hcCCCEEEECccccC
Confidence            999999999999999999999998887 889999999999999999999999999887   357899999977663

>cd01408 SIRT1 SIRT1: Eukaryotic group (class1) which includes human sirtuins SIRT1-3 and yeast Hst1-4; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation

Probab=100.00  E-value=1.1e-53  Score=418.95  Aligned_cols=204  Identities=55%  Similarity=1.070  Sum_probs=183.9

Q ss_pred             CcccCCCCCccCCCC-ccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhh
Q psy11832          1 MFGAAGIPDFRSPGS-GLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHF   79 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~-Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~   79 (494)
                      |||+||||||||+ + |+|+++.+++..++++++++++|.+||+.||+|++.++.                         
T Consensus        11 iS~~SGIPdfR~~-~~G~w~~~~~~~~~~~~~~~~~~~f~~~p~~~~~~~~~~~~-------------------------   64 (235)
T cd01408          11 ISTSAGIPDFRSP-GTGLYANLARYNLPYPEAMFDISYFRKNPRPFYALAKELYP-------------------------   64 (235)
T ss_pred             cccccCCCCcCCC-CCCcchhhhhccCCCHHHhcCHHHHHHChHHHHHHHHHHhc-------------------------
Confidence            7899999999999 7 999987776665789999999999999999999887542                         


Q ss_pred             cccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcC
Q psy11832         80 TQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEV  159 (494)
Q Consensus        80 ~~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~  159 (494)
                           .+++||++|++|++|+++++.++||||||||||+|||+++++|+|+||++++++|+.|++.|+.++....+....
T Consensus        65 -----~~a~Pn~~H~~la~L~~~g~~~~viTQNiD~Lh~raG~~~~~V~elHG~l~~~~C~~C~~~~~~~~~~~~~~~~~  139 (235)
T cd01408          65 -----GQFKPSVAHYFIKLLEDKGLLLRNYTQNIDTLERVAGVPDDRIIEAHGSFATAHCIKCKHKYPGDWMREDIFNQE  139 (235)
T ss_pred             -----CcCCCCHHHHHHHHHHhcCCceEEEEeccchHHHHcCCCccCEEEeCcCCCccccccCCCcCCHHHHHHHHhCCC
Confidence                 246777778888889999999999999999999999999899999999999999999999998877766665556


Q ss_pred             CCCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccc
Q psy11832        160 IPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQ  238 (494)
Q Consensus       160 ~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h  238 (494)
                      +|+||.|||.|||+||||||.+|+..++.+.+++++||++|||||||+|+|+++|++.++   .++++|+||.+|+...
T Consensus       140 ~p~C~~Cgg~lrP~Vv~FGE~lp~~~~~~~~~~~~~aDlllvvGTSl~V~pa~~l~~~~~---~~~~~v~iN~~~~~~~  215 (235)
T cd01408         140 VPKCPRCGGLVKPDIVFFGESLPSRFFSHMEEDKEEADLLIVIGTSLKVAPFASLPSRVP---SEVPRVLINREPVGHL  215 (235)
T ss_pred             CccCCCCCCCccCcEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCeeccHHHHHHHHh---CCCcEEEEeCCCCCCC
Confidence            899999999999999999999999988999999999999999999999999999998882   5789999999999865

Sir2 proteins have been shown to regulate gene silencing, DNA repair, and life span. The most-studied function, gene silencing, involves the inactivation of chromosome domains containing key regulatory genes by packaging them into a specialized chromatin structure that is inaccessible to DNA-binding proteins. The nuclear SIRT1 has been shown to target the p53 tumor suppressor protein for deacetylation to suppress DNA damage, and the cytoplasmic SIRT2 homolog has been shown to target alpha-tubulin for deacetylation for the maintenance of cell integrity.

>cd01413 SIR2_Af2 SIR2_Af2: Archaeal and prokaryotic group which includes Archaeoglobus fulgidus Sir2-Af2, Sulfolobus solfataricus ssSir2, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation

Probab=100.00  E-value=8.3e-51  Score=395.47  Aligned_cols=203  Identities=33%  Similarity=0.631  Sum_probs=180.8

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |+|+||||||||+ +|+|+++      ++++++++++|.+||+.||+|+++++..                         
T Consensus        15 iS~~sGIp~FR~~-~glw~~~------~~~~~~~~~~f~~~p~~~w~~~~~~~~~-------------------------   62 (222)
T cd01413          15 ISTESGIPDFRSP-DGLWKKY------DPEEVASIDYFYRNPEEFWRFYKEIILG-------------------------   62 (222)
T ss_pred             hhhhhCCCCccCc-CCCcCCC------CHHHhccHHHHhHCHHHHHHHHHHHhcc-------------------------
Confidence            7899999999999 5999864      3789999999999999999999876421                         


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCC
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI  160 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~  160 (494)
                         +..++||++|++|++|++++++++||||||||||+|||  .++|+|+||++++++|++|++.|+.+.. ..+....+
T Consensus        63 ---~~~a~Pn~~H~~La~L~~~~~~~~viTQNiDgLh~~AG--~~~v~elHG~l~~~~C~~C~~~~~~~~~-~~~~~~~~  136 (222)
T cd01413          63 ---LLEAQPNKAHYFLAELEKQGIIKAIITQNIDGLHQRAG--SKNVIELHGTLQTAYCVNCGSKYDLEEV-KYAKKHEV  136 (222)
T ss_pred             ---cCCCCCCHHHHHHHHHHhcCCCeEEEEeccchhhHHcC--CCcEEEccCCcCcceECCCCCCcchhHH-HHhccCCC
Confidence               23678999999999999999999999999999999999  4799999999999999999999887665 22334568


Q ss_pred             CCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccccc
Q psy11832        161 PTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPF  240 (494)
Q Consensus       161 P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~~  240 (494)
                      |+||.|||.+||+||+|||.+|+..++.+.+++++||++||||||++|+|+++|+..+  ...++++|+||.+|+.....
T Consensus       137 p~C~~Cgg~lrP~Vv~fgE~lp~~~~~~a~~~~~~~Dl~lvvGTSl~V~p~~~l~~~a--~~~g~~~i~iN~~~~~~~~~  214 (222)
T cd01413         137 PRCPKCGGIIRPDVVLFGEPLPQALLREAIEAAKEADLFIVLGSSLVVYPANLLPLIA--KENGAKLVIVNADETPFDYI  214 (222)
T ss_pred             CcCCCCCCccCCCEEECCCCCCHHHHHHHHHHHhcCCEEEEEccCCEeccHhHHHHHH--HHcCCeEEEEcCCCCCCCcc
Confidence            9999999999999999999999999999999999999999999999999999999988  46789999999999987666


Q ss_pred             ccc
Q psy11832        241 CSL  243 (494)
Q Consensus       241 a~l  243 (494)
                      +.+
T Consensus       215 ~~~  217 (222)
T cd01413         215 ADL  217 (222)
T ss_pred             eeE
Confidence            543

Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. The Sir2 homolog from the archaea Sulfolobus solftaricus deacetylates the non-specific DNA protein Alba to mediate transcription repression.

>COG0846 SIR2 NAD-dependent protein deacetylases, SIR2 family [Transcription]

Probab=100.00  E-value=4.9e-51  Score=399.99  Aligned_cols=208  Identities=33%  Similarity=0.538  Sum_probs=184.2

Q ss_pred             CcccCCCCCccCCCCcccc-ccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhh
Q psy11832          1 MFGAAGIPDFRSPGSGLYD-NLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHF   79 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~-~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~   79 (494)
                      |||+|||||||+. +|+|. ++      +|++++++++|++||+.||+|+.++...                        
T Consensus        23 iSa~sGIpdFR~~-~Gl~~~~~------~p~~l~s~~~f~~~p~~~~~f~~~~~~~------------------------   71 (250)
T COG0846          23 ISAESGIPDFRSK-DGLWSDKY------DPEDLASPSGFRRDPELVWDFYSERLRL------------------------   71 (250)
T ss_pred             cccccCCCcccCC-CCCCCCCC------CHHHHhCHHHHhhCHHHHHHHHHHHHHh------------------------
Confidence            7999999999999 69998 43      5999999999999999999999776421                        


Q ss_pred             cccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcC
Q psy11832         80 TQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEV  159 (494)
Q Consensus        80 ~~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~  159 (494)
                          ...++||++|++|++|++++++++||||||||||++||+  .+|+|+||++...+|..|+..+..+++........
T Consensus        72 ----~~~a~Pn~~H~~la~le~~~~~~~iiTQNiD~Lhe~AGs--~~Vi~lHGsl~~~~C~~C~~~~~~~~~~~~~~~~~  145 (250)
T COG0846          72 ----LYLAQPNKAHYALAELEDKGKLLRIITQNIDGLHERAGS--KNVIELHGSLKRVRCSKCGNQYYDEDVIKFIEDGL  145 (250)
T ss_pred             ----hhcCCCCHHHHHHHHHhhcCCceEEEecccchHHHHcCC--CcEEEeccceeeeEeCCCcCccchhhhhhhcccCC
Confidence                123788888888999999999999999999999999996  59999999999999999999887666544444446


Q ss_pred             CCCCCCCCC-eeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccc
Q psy11832        160 IPTCEKCNG-LVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQ  238 (494)
Q Consensus       160 ~P~C~~Cgg-~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h  238 (494)
                      +|+||.||+ .+||+||||||.+|...++.+.++++.||++||+|||+.|+|++.++..+  ..+++.+|.||..++.+.
T Consensus       146 ~p~C~~Cg~~~lrP~VV~fGE~lp~~~~~~~~~~~~~~d~liviGTSl~V~Paa~~p~~~--~~~g~~~i~iN~~~~~~~  223 (250)
T COG0846         146 IPRCPKCGGPVLRPDVVWFGEPLPASFLDEALEALKEADLLIVIGTSLKVYPAAGLPELA--KRRGAKVIEINLEPTRLD  223 (250)
T ss_pred             CCcCccCCCccccCCEEEeCCCCCHHHHHHHHHHhccCCEEEEECcceEEcChhhhhHHH--HhcCCEEEEECCCcccCc
Confidence            899999999 99999999999999999999999999999999999999999999988856  689999999999999988


Q ss_pred             ccccccccc
Q psy11832        239 PFCSLVDKT  247 (494)
Q Consensus       239 ~~a~l~~~~  247 (494)
                      +.+.+.-.+
T Consensus       224 ~~~d~~i~~  232 (250)
T COG0846         224 PIADEVIRG  232 (250)
T ss_pred             chhHHHHHh
Confidence            877655443

>PTZ00409 Sir2 (Silent Information Regulator) protein; Provisional

Probab=100.00  E-value=1.4e-50  Score=403.31  Aligned_cols=204  Identities=25%  Similarity=0.459  Sum_probs=175.7

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+++|+|+++      +|++++++.+|.+||+.||+|++++..                          
T Consensus        39 iSteSGIPdFR~~~~Glw~~~------~~~~~~t~~~f~~~p~~~~~~~~~~~~--------------------------   86 (271)
T PTZ00409         39 TSAESNIPSFRGPSSSIWSKY------DPKIYGTIWGFWKYPEKIWEVIRDISS--------------------------   86 (271)
T ss_pred             echhhCCCcccCCCCccccCC------CHHHhccHHHHHHChHHHHHHHHHhhh--------------------------
Confidence            789999999999845999875      478999999999999999999876421                          


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHH-HH---Hh
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMK-ER---IF  156 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~-~~---i~  156 (494)
                         ..+++||++|++|++|+++|+..+||||||||||++||.  ++|+|+|||+++.+|+.|++.++.+... ..   ..
T Consensus        87 ---~~~a~PN~~H~aLa~Le~~g~~~~vITQNIDgLh~rAGs--~~V~ElHG~l~~~~C~~C~~~~~~~~~~~~~~~~~~  161 (271)
T PTZ00409         87 ---DYEIELNPGHVALSTLESLGYLKFVVTQNVDGLHEESGN--TKVIPLHGSVFEARCCTCRKTIQLNKIMLQKTSHFM  161 (271)
T ss_pred             ---cccCCCCHHHHHHHHHHhcCCCcEEEeccccchHhHcCC--CcEEEeccCcCcceeCCCCCCcccCHHHHhhhhhhc
Confidence               135788999999999999999999999999999999994  7999999999999999999987644322 11   11


Q ss_pred             hcCCCCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccc
Q psy11832        157 AEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLV  236 (494)
Q Consensus       157 ~~~~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~  236 (494)
                      ...+|+|+ |||.+||+||||||.+|...++.|.+++++||++||||||++|+|+++|+..+  ...++++|+||.+|+.
T Consensus       162 ~~~~P~C~-Cgg~lrP~VV~FGE~lp~~~~~~a~~~~~~aDlllviGTSl~V~pa~~l~~~a--~~~g~~vi~IN~~~t~  238 (271)
T PTZ00409        162 HQLPPECP-CGGIFKPNVILFGEVIPKSLLKQAEKEIDKCDLLLVVGTSSSVSTATNLCYRA--HRKKKKIVEVNISKTY  238 (271)
T ss_pred             cCCCCCCC-CCCcccCcEEEeCCcCCHHHHHHHHHHHHcCCEEEEECCCCcccCHHHHHHHH--HHcCCCEEEECCCCCC
Confidence            23479999 99999999999999999999999999999999999999999999999999987  5678999999999998


Q ss_pred             cc-cccccc
Q psy11832        237 VQ-PFCSLV  244 (494)
Q Consensus       237 ~h-~~a~l~  244 (494)
                      .. ..+.+.
T Consensus       239 ~~~~~~d~~  247 (271)
T PTZ00409        239 ITNRISDYH  247 (271)
T ss_pred             CCCccccEE
Confidence            65 344433

>PRK14138 NAD-dependent deacetylase; Provisional

Probab=100.00  E-value=2.1e-50  Score=397.57  Aligned_cols=208  Identities=35%  Similarity=0.598  Sum_probs=184.5

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |+|+||||||||+ +|+|+++       +++++++.+|.++|+.||+|+++.+.                          
T Consensus        22 iS~~SGIp~fR~~-~gl~~~~-------~~~~~~~~~~~~~p~~~w~~~~~~~~--------------------------   67 (244)
T PRK14138         22 ISTPSGIPDFRGP-QGIYKKY-------PQNVFDIDFFYSHPEEFYRFAKEGIF--------------------------   67 (244)
T ss_pred             cchhhCCCCcCCC-CCCccCC-------cccccCHHHHHhCHHHHHHHHHHhhc--------------------------
Confidence            7999999999999 6999863       57889999999999999999876431                          


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCC
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI  160 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~  160 (494)
                        .+.+++||.+|++|+.|+++|+..+||||||||||++||.  ++|+|+||++++++|++|++.|+.+.....+....+
T Consensus        68 --~~~~~~Pn~~H~ala~L~~~g~~~~viTQNIDgLh~~aG~--~~VielHG~~~~~~C~~C~~~~~~~~~~~~~~~~~~  143 (244)
T PRK14138         68 --PMLEAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQKAGS--KKVIELHGNVEEYYCVRCGKRYTVEDVIEKLEKSDV  143 (244)
T ss_pred             --ccccCCCCHHHHHHHHHHHcCCceEEEeecccChhhHcCC--CeEEEccCCcCeeEECCCCCcccHHHHHHHHhcCCC
Confidence              2346789999999999999999999999999999999994  799999999999999999999988776655555568


Q ss_pred             CCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccccc
Q psy11832        161 PTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPF  240 (494)
Q Consensus       161 P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~~  240 (494)
                      |+||.|||.+||+||||||.+|...++.+.+++++||++|||||||+|+|+++|+..+  ...++++|+||.+|+.....
T Consensus       144 p~Cp~Cgg~lrP~Vv~FgE~~p~~~~~~~~~~~~~aDl~lviGTSl~V~pa~~l~~~~--~~~g~~~i~iN~~~t~~d~~  221 (244)
T PRK14138        144 PRCDDCSGLIRPNIVFFGEALPQDALREAIRLSSKASLMIVMGSSLVVYPAAELPLIT--VRSGGKLVIVNLGETPLDDI  221 (244)
T ss_pred             CCCCCCCCeECCCEEECCCcCCHHHHHHHHHHHhcCCEEEEeCcCCeeecHhHHHHHH--HHcCCeEEEEcCCCCCCCcc
Confidence            9999999999999999999999999999999999999999999999999999999887  45789999999999998877


Q ss_pred             cccccccc
Q psy11832        241 CSLVDKTN  248 (494)
Q Consensus       241 a~l~~~~~  248 (494)
                      +.+.-.+.
T Consensus       222 ~~~~i~~~  229 (244)
T PRK14138        222 ATLKYNMD  229 (244)
T ss_pred             eeEEEeCC
Confidence            76544443

>cd01409 SIRT4 SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation

Probab=100.00  E-value=1.6e-49  Score=394.57  Aligned_cols=208  Identities=30%  Similarity=0.489  Sum_probs=175.6

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+ +|+|++.  +   ++   +++..|.+||+.+|.|+...+..                         
T Consensus        19 iSt~SGIPdFR~~-~Glw~~~--~---~~---~~~~~f~~~p~~~~~~~~~~~~~-------------------------   64 (260)
T cd01409          19 ISTESGIPDYRSE-GGLYSRT--F---RP---MTHQEFMRSPAARQRYWARSFVG-------------------------   64 (260)
T ss_pred             eehhhCCCCCCCc-CCcccCC--C---CC---CCHHHHHhCcHHHHHHHHHHHhh-------------------------
Confidence            7999999999999 5999973  1   13   46689999999888776543210                         


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHh----
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIF----  156 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~----  156 (494)
                      +..+..++||++|++|++|+++|+..+||||||||||++||+  ++|+|+|||+++++|..|++.++.+++...+.    
T Consensus        65 ~~~~~~~~Pn~~H~~la~L~~~g~~~~viTQNIDgLh~~aG~--~~vielHG~~~~~~C~~C~~~~~~~~~~~~~~~~~~  142 (260)
T cd01409          65 WPRFSAAQPNAAHRALAALEAAGRLHGLITQNVDGLHTKAGS--RNVVELHGSLHRVVCLSCGFRTPRAELQDRLEALNP  142 (260)
T ss_pred             hhhhccCCCCHHHHHHHHHHHcCCCeeEEeeccchhHHHcCC--CCEEEEeeecCEEEeCCCcCccCHHHHHHHHhhcCc
Confidence            011246899999999999999999999999999999999996  69999999999999999999988665543221    


Q ss_pred             -----------------------hcCCCCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhh
Q psy11832        157 -----------------------AEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCS  213 (494)
Q Consensus       157 -----------------------~~~~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~  213 (494)
                                             ...+|+||.|||.+||+||||||.+|...++.|.+++++||++|||||||+|+|+++
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~C~~Cgg~lrP~VV~FGE~lp~~~~~~a~~~~~~aDlllviGTSl~V~pa~~  222 (260)
T cd01409         143 GFAEQAAGQAPDGDVDLEDEQVAGFRVPECERCGGVLKPDVVFFGENVPRDRVVTAAARLAEADALLVLGSSLMVYSGYR  222 (260)
T ss_pred             chhhhhcccCCCcccccchhhcccCCCCCCCCCCCEECCCEEECCCCCCHHHHHHHHHHHhcCCEEEEeCcCceecchhh
Confidence                                   124799999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhcCCCceEEEEeccccccccccccccc
Q psy11832        214 LVDKVDVDFPKADLLLIMGTSLVVQPFCSLVDK  246 (494)
Q Consensus       214 lv~~~~~~~~~a~lv~IN~~p~~~h~~a~l~~~  246 (494)
                      ++..+  ...|+++|+||.+|+.....+.+.-.
T Consensus       223 l~~~a--~~~g~~viiIN~~~t~~d~~a~~~i~  253 (260)
T cd01409         223 FVLAA--AEAGLPIAIVNIGPTRADHLATLKVD  253 (260)
T ss_pred             HHHHH--HHCCCcEEEEcCCCCCCCccccEEEe
Confidence            99988  45699999999999998776654433

Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span.

>cd01410 SIRT7 SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation

Probab=100.00  E-value=2.6e-49  Score=380.49  Aligned_cols=190  Identities=32%  Similarity=0.468  Sum_probs=165.5

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+ +|+|++..      +        |.++|..+|.|+                               
T Consensus        11 iS~~SGIP~fR~~-~Glw~~~~------~--------~~~~~~~~~~~~-------------------------------   44 (206)
T cd01410          11 ISTSAGIPDFRGP-NGVWTLLP------E--------DKGRRRFSWRFR-------------------------------   44 (206)
T ss_pred             ccHhhCCCcccCc-CCCcccCC------c--------cccChHHHhhhh-------------------------------
Confidence            7899999999999 69998642      1        566787777643                               


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHh-hcC
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIF-AEV  159 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~-~~~  159 (494)
                           .++||++|++|++|+++++.++||||||||||++||+++++|+|+||++++++|++|++.++.++....+. ...
T Consensus        45 -----~~~Pn~~H~~La~l~~~g~~~~viTQNID~Lh~~AG~~~~~vielHG~~~~~~C~~C~~~~~~~~~~~~~~~~~~  119 (206)
T cd01410          45 -----RAEPTLTHMALVELERAGLLKFVISQNVDGLHLRSGLPREKLSELHGNMFIEVCKSCGPEYVRDDVVETRGDKET  119 (206)
T ss_pred             -----cCCCCHHHHHHHHHHHCCCCceEEecCccchHhHcCcCcccEEEecCCcCcccCCCCCCccchHHHHHHhhcCCC
Confidence                 24677777777779988999999999999999999998899999999999999999999988776665543 346


Q ss_pred             CCCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccccccc
Q psy11832        160 IPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQP  239 (494)
Q Consensus       160 ~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~  239 (494)
                      +|+|+.|||.+||+||||||.+|...++.+.+++++||++||||||++|+|+++|+..+  ...++++|+||.+|+....
T Consensus       120 ~p~C~~Cgg~lrP~VV~FgE~lp~~~~~~a~~~~~~aDlllviGTSl~V~pa~~l~~~~--~~~g~~vi~iN~~~~~~d~  197 (206)
T cd01410         120 GRRCHACGGILKDTIVDFGERLPPENWMGAAAAACRADLFLCLGTSLQVTPAANLPLKA--ARAGGRLVIVNLQPTPKDK  197 (206)
T ss_pred             CCcCCCCcCccCCcEEECCCCCCHHHHHHHHHHHhcCCEEEEECcCceehhHHHHHHHH--HhcCCeEEEECCCCCCCCc
Confidence            89999999999999999999999999999999999999999999999999999999887  4678999999999999776


Q ss_pred             cccc
Q psy11832        240 FCSL  243 (494)
Q Consensus       240 ~a~l  243 (494)
                      .+.+
T Consensus       198 ~~d~  201 (206)
T cd01410         198 LADL  201 (206)
T ss_pred             cccE
Confidence            6543

Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span.

>cd01407 SIR2-fam SIR2 family of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose

Probab=100.00  E-value=5.3e-49  Score=381.97  Aligned_cols=201  Identities=37%  Similarity=0.624  Sum_probs=178.0

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchh-cchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhh
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAI-FELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHF   79 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~-~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~   79 (494)
                      |+|+||||||||+ +|+|+++.      ++.+ +++++|+++|+.||+|++.+..                         
T Consensus        11 iS~~sGIpdfR~~-~G~~~~~~------~~~~~~~~~~~~~~p~~~~~~~~~~~~-------------------------   58 (218)
T cd01407          11 ISTESGIPDFRSP-GGLWARLD------PEELAFSPEAFRRDPELFWGFYRERRY-------------------------   58 (218)
T ss_pred             cccccCCCcccCC-CCccccCC------hhhccCCHHHHHHCHHHHHHHHHHhhh-------------------------
Confidence            7899999999999 69999864      3444 4899999999999999876531                         


Q ss_pred             cccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcC
Q psy11832         80 TQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEV  159 (494)
Q Consensus        80 ~~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~  159 (494)
                          +.+++||++|++|++|+++++.++||||||||||++||++  +|+|+||++..++|+.|++.++.+.....+....
T Consensus        59 ----~~~~~Pn~~H~~L~~L~~~~~~~~viTQNiDgL~~~aG~~--~v~elHG~~~~~~C~~C~~~~~~~~~~~~~~~~~  132 (218)
T cd01407          59 ----PLNAQPNPAHRALAELERKGKLKRVITQNVDGLHQRAGSP--KVIELHGSLFRVRCTKCGKEYPRDELQADIDREE  132 (218)
T ss_pred             ----hccCCCCHHHHHHHHHHhcCCCeeEEEeccchhHHHcCCC--CEEECcCCcCcceeCCCcCCCcHHHHhHhhccCC
Confidence                3467899999999999999999999999999999999985  9999999999999999999987765544555667


Q ss_pred             CCCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccccccc
Q psy11832        160 IPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQP  239 (494)
Q Consensus       160 ~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~  239 (494)
                      +|+||.|||.+||+||+|||.+|.. ++++.++++++|++||||||+.|+|++++++.+  ..+++++|+||.+|+....
T Consensus       133 ~p~C~~Cg~~lrP~Vv~fgE~~p~~-~~~a~~~~~~~Dl~lvlGTSl~V~p~~~l~~~~--~~~~~~~i~iN~~~~~~~~  209 (218)
T cd01407         133 VPRCPKCGGLLRPDVVFFGESLPEE-LDEAAEALAKADLLLVIGTSLQVYPAAGLPLYA--PERGAPVVIINLEPTPADR  209 (218)
T ss_pred             CCcCCCCCCccCCCeEECCCCCcHH-HHHHHHHHhcCCEEEEeCCCcccccHHHHHHHH--HHCCCeEEEECCCCCCCCc
Confidence            9999999999999999999999999 999999999999999999999999999999998  3469999999999999765


Q ss_pred             ccc
Q psy11832        240 FCS  242 (494)
Q Consensus       240 ~a~  242 (494)
                      .+.
T Consensus       210 ~~d  212 (218)
T cd01407         210 KAD  212 (218)
T ss_pred             cce
Confidence            443

Sir2 proteins, also known as sirtuins, are found in all eukaryotes and many archaea and prokaryotes and have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. The most-studied function, gene silencing, involves the inactivation of chromosome domains containing key regulatory genes by packaging them into a specialized chromatin structure that is inaccessible to DNA-binding proteins. The oligomerization state of Sir2 appears to be organism-dependent, sometimes occurring as a monomer and sometimes as a multimer.

>cd01411 SIR2H SIR2H: Uncharacterized prokaryotic Sir2 homologs from several gram positive bacterial species and Fusobacteria; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation

Probab=100.00  E-value=1.8e-48  Score=379.75  Aligned_cols=199  Identities=36%  Similarity=0.561  Sum_probs=175.4

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |+|+||||||||+ +|+|+++.  .+ ++++++++++|.++|+.||+|+++.+                           
T Consensus        19 iS~~sGIpdfR~~-~G~w~~~~--~~-~~~~~~~~~~~~~~p~~~~~~~~~~~---------------------------   67 (225)
T cd01411          19 VSTASGIPDYRSK-NGLYNEIY--KY-SPEYLLSHDFLEREPEKFYQFVKENL---------------------------   67 (225)
T ss_pred             cccccCCCCccCC-CcCccCcC--CC-ChHHeecHHHHHHCHHHHHHHHHHHh---------------------------
Confidence            7999999999999 69999864  22 58999999999999999999887642                           


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCC
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI  160 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~  160 (494)
                        .+.+++||.+|++|++|++++ +++||||||||||++||  .++|+|+||+++..+|++|++.++.+..      ..+
T Consensus        68 --~~~~~~Pn~~H~~La~L~~~~-~~~viTQNvD~Lh~~aG--~~~v~elHG~~~~~~C~~C~~~~~~~~~------~~~  136 (225)
T cd01411          68 --YFPDAKPNIIHQKMAELEKMG-LKAVITQNIDGLHQKAG--SKNVVEFHGSLYRIYCTVCGKTVDWEEY------LKS  136 (225)
T ss_pred             --hCCCCCCCHHHHHHHHHHHcC-CcEEEEeccchhhhhcC--CCcEEEeCCCcCeeEeCCCCCccchhhc------CCC
Confidence              134678899999999999877 89999999999999999  4799999999999999999988765432      247


Q ss_pred             CCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccccc
Q psy11832        161 PTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPF  240 (494)
Q Consensus       161 P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~~  240 (494)
                      |+||.|||.+||+||+|||.+|...++.+.++++++|++||||||+.|+|+++++..+   .+++++|+||.+|+.....
T Consensus       137 p~C~~Cgg~lrP~vv~fge~~~~~~~~~~~~~~~~~DlllviGTSl~v~p~~~l~~~~---~~~~~~i~iN~~~~~~~~~  213 (225)
T cd01411         137 PYHAKCGGVIRPDIVLYEEMLNESVIEEAIQAIEKADLLVIVGTSFVVYPFAGLIDYR---QAGANLIAINKEPTQLDSP  213 (225)
T ss_pred             CCCCCCCCEeCCCEEEcCCCCCHHHHHHHHHHHhcCCEEEEECcCCeehhHHHHHHHH---hCCCeEEEECCCCCCCCcc
Confidence            9999999999999999999999999999999999999999999999999999999876   2699999999999998776


Q ss_pred             cccc
Q psy11832        241 CSLV  244 (494)
Q Consensus       241 a~l~  244 (494)
                      +.+.
T Consensus       214 ~~~~  217 (225)
T cd01411         214 ATLV  217 (225)
T ss_pred             hheh
Confidence            5543

Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span.

>cd01412 SIRT5_Af1_CobB SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E

Probab=100.00  E-value=6.3e-48  Score=375.85  Aligned_cols=198  Identities=30%  Similarity=0.477  Sum_probs=174.7

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |+|+||||||||+ +|+|+++      .+++++++.+|.++|+.+|+|+..+..                          
T Consensus        11 iS~~sGIp~fR~~-~g~~~~~------~~~~~~~~~~f~~~p~~~w~f~~~~~~--------------------------   57 (224)
T cd01412          11 ISAESGIPTFRDA-DGLWARF------DPEELATPEAFARDPELVWEFYNWRRR--------------------------   57 (224)
T ss_pred             cchhhCCCCccCc-CCCcCCC------ChhhcCCHHHHHHCHHHHHHHHHHHHH--------------------------
Confidence            7999999999999 5999875      368899999999999999998865421                          


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCC
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI  160 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~  160 (494)
                        .+..++||.+|++|++|++++++++||||||||||++||+  ++|+|+||++..++|..|++.+..+.   .+....+
T Consensus        58 --~~~~~~Pn~~H~~L~~L~~~~~~~~viTqNiDgL~~~aG~--~~v~e~HG~~~~~~C~~C~~~~~~~~---~~~~~~~  130 (224)
T cd01412          58 --KALRAQPNPAHLALAELERRLPNVLLITQNVDGLHERAGS--RNVIELHGSLFRVRCSSCGYVGENNE---EIPEEEL  130 (224)
T ss_pred             --HccccCCCHHHHHHHHHHhcCCCeEEEEccchHhhHHhCC--CceEeeCCCcCccccCCCCCCCCcch---hhhccCC
Confidence              1246789999999999999888999999999999999997  89999999999999999999876542   2334568


Q ss_pred             CCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccccc
Q psy11832        161 PTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPF  240 (494)
Q Consensus       161 P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~~  240 (494)
                      |+||.|||.+||+||+|||.+|. .++.+.++++++|++||||||+.|.|+.++++.+  ..+++++|+||.+|+.....
T Consensus       131 p~C~~Cgg~lrp~Vv~fge~~p~-~~~~~~~~~~~~dl~lvlGTsl~v~p~~~l~~~~--~~~~~~~i~iN~~~~~~~~~  207 (224)
T cd01412         131 PRCPKCGGLLRPGVVWFGESLPL-ALLEAVEALAKADLFLVIGTSGVVYPAAGLPEEA--KERGARVIEINPEPTPLSPI  207 (224)
T ss_pred             CCCCCCCCccCCceEECCCCCHH-HHHHHHHHHHcCCEEEEECcCccchhHHHHHHHH--HHCCCeEEEECCCCCCCCCc
Confidence            99999999999999999999999 8899999999999999999999999999999876  46899999999999987643


Q ss_pred             c
Q psy11832        241 C  241 (494)
Q Consensus       241 a  241 (494)
                      +
T Consensus       208 ~  208 (224)
T cd01412         208 A  208 (224)
T ss_pred             C
Confidence            3

coli CobB; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. CobB is a bacterial sirtuin that deacetylates acetyl-CoA synthetase at an active site lysine to stimulate its enzymatic activity.

>PTZ00408 NAD-dependent deacetylase; Provisional

Probab=100.00  E-value=1.3e-47  Score=376.69  Aligned_cols=198  Identities=25%  Similarity=0.351  Sum_probs=166.7

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+ +|+|+++      ++++++++.+|.+||+.+|+|+..+..                          
T Consensus        15 iS~~SGIPdFR~~-~Glw~~~------~~~~~~~~~~f~~~p~~~~~f~~~~~~--------------------------   61 (242)
T PTZ00408         15 ISAESGISTFRDG-NGLWENH------RVEDVATPDAFLRNPALVQRFYNERRR--------------------------   61 (242)
T ss_pred             hhhhhCCCcccCC-CCCCCCC------ChhhcCCHHHHHhCHHHHHHHHHHHHH--------------------------
Confidence            7899999999999 6999864      478889999999999999998754310                          


Q ss_pred             ccccCCCCCChhHHHHHHHHhc--CCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhc
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQK--NLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAE  158 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~--~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~  158 (494)
                      .....+++||.+|++|++|++.  ++.++||||||||||++||.  ++|+|+||++++++|+.|++.|+.+...    ..
T Consensus        62 ~~~~~~~~Pn~~H~~L~~Le~~~~~~~~~iiTQNiDgLh~~AG~--~~v~elHG~~~~~~C~~C~~~~~~~~~~----~~  135 (242)
T PTZ00408         62 ALLSSSVKPNKAHFALAKLEREYRGGKVVVVTQNVDNLHERAGS--THVLHMHGELLKVRCTATGHVFDWTEDV----VH  135 (242)
T ss_pred             HhccCCCCCCHHHHHHHHHHHhhcCCcEEEEeecccchhhHcCC--CcEEEecCccceEEECCCCcccCchhhh----hc
Confidence            0012467899999999999875  78899999999999999995  7899999999999999999988754322    12


Q ss_pred             CCCCCCCCC--CeeeeeEEecCC-CCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccc
Q psy11832        159 VIPTCEKCN--GLVKPDIVFFGE-NLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSL  235 (494)
Q Consensus       159 ~~P~C~~Cg--g~lrP~Vv~FgE-~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~  235 (494)
                      .+|+||.||  |.+||+|||||| .+|...++   +++.+||++||||||++|+|+++|+..+  ...++++|+||.+|+
T Consensus       136 ~~p~C~~Cg~~g~lrP~vV~FGE~~~~~~~~~---~~~~~~DlllviGTSl~V~pa~~l~~~a--~~~g~~vi~IN~~~~  210 (242)
T PTZ00408        136 GSSRCKCCGCVGTLRPHIVWFGEMPLYMDEIE---SVMSKTDLFVAVGTSGNVYPAAGFVGRA--QFYGATTLELNLEEG  210 (242)
T ss_pred             CCCccccCCCCCCCCCCEEEcCCCCCcHHHHH---HHHHhCCEEEEEccCCccccHHHHHHHH--HHcCCeEEEECCCCC
Confidence            479999998  999999999999 77765554   4478899999999999999999999988  567999999999998


Q ss_pred             ccccccc
Q psy11832        236 VVQPFCS  242 (494)
Q Consensus       236 ~~h~~a~  242 (494)
                      .....+.
T Consensus       211 ~~~~~~~  217 (242)
T PTZ00408        211 TNYSQFD  217 (242)
T ss_pred             CCCccCC
Confidence            7765443

>PRK00481 NAD-dependent deacetylase; Provisional

Probab=100.00  E-value=4.1e-47  Score=374.30  Aligned_cols=199  Identities=31%  Similarity=0.499  Sum_probs=176.0

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||. +|+|+++      ++++++++++|.++|+.||.|++.+..                          
T Consensus        24 iS~~sGip~FR~~-~gl~~~~------~~~~~~~~~~~~~~p~~~w~f~~~~~~--------------------------   70 (242)
T PRK00481         24 ISAESGIPDFRSA-NGLWEEH------RPEDVASPEGFARDPELVWKFYNERRR--------------------------   70 (242)
T ss_pred             cccccCCCCccCC-CcCccCC------CHHHhccHHHHhhCHHHHHHHHHHHHH--------------------------
Confidence            7999999999998 6999863      478999999999999999998865421                          


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCC
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI  160 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~  160 (494)
                        .+.+++||++|++|++|+++|++++||||||||||++||.  ++|+|+||+++.++|++|++.|+.+...    ...+
T Consensus        71 --~~~~~~Pn~~H~~L~~L~~~~~~~~viTqNiD~L~~~aG~--~~v~elHG~~~~~~C~~C~~~~~~~~~~----~~~~  142 (242)
T PRK00481         71 --QLLDAKPNAAHRALAELEKLGKLVTVITQNIDGLHERAGS--KNVIELHGSLLRARCTKCGQTYDLDEYL----KPEP  142 (242)
T ss_pred             --HhccCCCCHHHHHHHHHHhcCCCeEEEEeccchhHHHcCC--CceeeccCCcCceeeCCCCCCcChhhhc----cCCC
Confidence              0126789999999999998899999999999999999995  7999999999999999999988765443    2358


Q ss_pred             CCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccccc
Q psy11832        161 PTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPF  240 (494)
Q Consensus       161 P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~~  240 (494)
                      |+||.|||.+||+||+|||.+|+..+..+.++++++|++||||||++|+|+.++++.+  ..+++++|+||.+|+.....
T Consensus       143 p~C~~Cgg~lrP~Vv~fge~~~~~~~~~a~~~~~~~dl~lviGTsl~V~p~~~l~~~~--~~~~~~~i~iN~~~~~~~~~  220 (242)
T PRK00481        143 PRCPKCGGILRPDVVLFGEMLPELAIDEAYEALEEADLFIVIGTSLVVYPAAGLPYEA--REHGAKTVEINLEPTPLDSL  220 (242)
T ss_pred             CCCCCCCCccCCCeEECCCCCCHHHHHHHHHHHhcCCEEEEECCCceEcCHhHHHHHH--HHCCCeEEEECCCCCCCCCc
Confidence            9999999999999999999999998999999999999999999999999999999866  46899999999999986554


Q ss_pred             cc
Q psy11832        241 CS  242 (494)
Q Consensus       241 a~  242 (494)
                      +.
T Consensus       221 ~~  222 (242)
T PRK00481        221 FD  222 (242)
T ss_pred             cC
Confidence            43

>PF02146 SIR2: Sir2 family; InterPro: IPR003000 These sequences represent the Sirtuin (Sir2-related) family of NAD+-dependent deacetylases

Probab=100.00  E-value=4.9e-47  Score=357.06  Aligned_cols=173  Identities=40%  Similarity=0.659  Sum_probs=141.6

Q ss_pred             CcccCCCCCccC-CCCccccccccCCCCCcchhcchhHHhhChHHHHH-HHHHHCCCCCCCChhHHHHHHHhhhhhhhhh
Q psy11832          1 MFGAAGIPDFRS-PGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYT-LAKELYPGSFKPTPCHYFLKLLHQKNLLLRH   78 (494)
Q Consensus         1 ~~~~SGIPdFRg-~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~-~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~   78 (494)
                      |||+|||||||| + +|+|+++.      +..+.++.+|.++|..+|+ |++.+.                         
T Consensus         4 iS~~SGIpdfR~~~-~Glw~~~~------~~~l~~~~~~~~~~~~~~~~f~~~~~-------------------------   51 (178)
T PF02146_consen    4 ISTASGIPDFRSDP-DGLWTKYK------PEELATPEAFFSDPEFVWEKFYRFRR-------------------------   51 (178)
T ss_dssp             GGGGGT--SSSSTT-SCHHHHCH------HHHHSSHHHHHHHHHHHHHHHHHHHH-------------------------
T ss_pred             cchhhCCCccccCC-CCcceeee------ccccccccccccccchhhhHHHHHhh-------------------------
Confidence            789999999999 7 79999864      4557788899999998777 543321                         


Q ss_pred             hcccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhc
Q psy11832         79 FTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAE  158 (494)
Q Consensus        79 ~~~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~  158 (494)
                        ......++||.+|++|++|+++++.++||||||||||++||++  +|+|+|||++.++|+.|++.++.+.....+...
T Consensus        52 --~~~~~~a~Pn~~H~~La~L~~~g~~~~viTQNIDgLh~~AG~~--~vielHG~l~~~~C~~C~~~~~~~~~~~~~~~~  127 (178)
T PF02146_consen   52 --KVISKDAEPNPGHRALAELEKKGKLKRVITQNIDGLHQKAGSP--KVIELHGSLFRLRCSKCGKEYDREDIVDSIDEE  127 (178)
T ss_dssp             --HHCTCTS---HHHHHHHHHHHTTSEEEEEES-SSSHHHHTTES--CEEETTEEEEEEEETTTSBEEEGHHHHHHHHTT
T ss_pred             --hhccccCCCChhHHHHHHHHHhhhhccceecccchhhhcccch--hhHHHHhhhceeeecCCCccccchhhccccccc
Confidence              0111278899999999999999999999999999999999985  999999999999999999999888777777778


Q ss_pred             CCCCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhh
Q psy11832        159 VIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQP  210 (494)
Q Consensus       159 ~~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~p  210 (494)
                      ..|+||.||+.|||+||+|||.+| ..+..+.+++++||++|||||||+|+|
T Consensus       128 ~~~~C~~C~~~lrp~vv~fgE~~~-~~~~~~~~~~~~~Dl~lviGTSl~V~P  178 (178)
T PF02146_consen  128 EPPRCPKCGGLLRPDVVLFGESLP-EEIEEAIEDAEEADLLLVIGTSLQVYP  178 (178)
T ss_dssp             SSCBCTTTSCBEEEEE--BTSB-S-HHHHHHHHHHHH-SEEEEESS-STSTT
T ss_pred             ccccccccCccCCCCeeecCCCCH-HHHHHHHHHHHcCCEEEEEccCcEEEC
Confidence            899999999999999999999999 778899999999999999999999998

This family of enzymes is broadly conserved from bacteria to humans. In yeast, Sir2 proteins form complexes with other proteins to silence chromatin by accessing histones and deacetylating them. Sir2 proteins have been proposed to play a role in silencing, chromosome stability and ageing []. The bacterial enzyme CobB, an homologue of Sir2, is a phosphoribosyltransferase []. An in vitro ADP ribosyltransferase activity has also been associated with human members of this family []. Sir2-like enzymes employ NAD+ as a cosubstrate in deacetylation reactions [] and catalyse a reaction in which the cleavage of NAD(+)and histone and/or protein deacetylation are coupled to the formation of O-acetyl-ADP-ribose, a novel metabolite. The dependence of the reaction on both NAD(+) and the generation of this potential second messenger offers new clues to understanding the function and regulation of nuclear, cytoplasmic and mitochondrial Sir2-like enzymes []. Silent Information Regulator protein of Saccharomyces cerevisiae (Sir2) is one of several factors critical for silencing at least three loci. Among them, it is unique because it silences the rDNA as well as the mating type loci and telomeres []. Sir2 interacts in a complex with itself and with Sir3 and Sir4, two proteins that are able to interact with nucleosomes. In addition Sir2 also interacts with ubiquitination factors and/or complexes []. Homologues of Sir2 share a core domain including the GAG and NID motifs and a putative C4 Zinc finger. The regions containing these three conserved motifs are individually essential for Sir2 silencing function, as are the four cysteins []. In addition, the conserved residues HG next to the putative Zn finger have been shown to be essential for the ADP ribosyltransferase activity []. ; GO: 0008270 zinc ion binding, 0070403 NAD+ binding, 0006476 protein deacetylation; PDB: 1S5P_A 3PKI_E 3PKJ_F 3K35_A 1ICI_A 1M2K_A 1M2G_A 1M2N_B 1M2H_A 1M2J_A ....

>PRK05333 NAD-dependent deacetylase; Provisional

Probab=100.00  E-value=1.3e-45  Score=371.46  Aligned_cols=204  Identities=25%  Similarity=0.408  Sum_probs=167.3

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+ +|+|++..      ++   +...|..+|...|.|++..+.                         .
T Consensus        30 iS~~SGIPdFR~~-~G~w~~~~------~~---~~~~~~~~~~~~~~~~~~~~~-------------------------~   74 (285)
T PRK05333         30 ISTDSGIPDYRDR-NGQWKRSP------PI---TYQAFMGSDAARRRYWARSMV-------------------------G   74 (285)
T ss_pred             cccccCCCcccCC-CCccccCC------cc---cHHHHhcCchhhHHHHHHHHh-------------------------h
Confidence            7999999999999 69998742      32   345677777654444432210                         0


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHh----
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIF----  156 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~----  156 (494)
                      +..+..++||++|++|++|+++|++++||||||||||+|||  .++|+|+||++..++|++|++.++.++....+.    
T Consensus        75 ~~~~~~~~Pn~~H~aLa~L~~~g~~~~viTQNIDgLh~rAG--~~~ViElHG~~~~~~C~~C~~~~~~~~~~~~~~~~~~  152 (285)
T PRK05333         75 WPVFGRAQPNAAHHALARLGAAGRIERLVTQNVDGLHQRAG--SRDVIELHGRLDGVRCMGCGARHPRAEIQHVLEAANP  152 (285)
T ss_pred             chhcccCCCCHHHHHHHHHHHcCCcccEEecccchhHHHcC--CCCEEeecCCcCEEEECCCCCcCCHHHHHHHHhhcCc
Confidence            01134689999999999999999999999999999999999  479999999999999999999887665433221    


Q ss_pred             -----------------------hcCCCCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhh
Q psy11832        157 -----------------------AEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCS  213 (494)
Q Consensus       157 -----------------------~~~~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~  213 (494)
                                             ...+|+||.|||.|||+||+|||.+|+..+..+.++++++|++||||||+.|+|++.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~iP~C~~Cgg~lrP~Vv~FgE~lp~~~~~~a~~~~~~~DlllvvGTSl~V~p~~~  232 (285)
T PRK05333        153 EWLALEAAPAPDGDADLEWAAFDHFRVPACPACGGILKPDVVFFGENVPRERVAAARAALDAADAVLVVGSSLMVYSGYR  232 (285)
T ss_pred             chhhhhcccCCCccccccccccccCCCCCCCCCCCcccCCEEEcCCCCCHHHHHHHHHHHhcCCEEEEECcCceecchhh
Confidence                                   124799999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhcCCCceEEEEecccccccccccc
Q psy11832        214 LVDKVDVDFPKADLLLIMGTSLVVQPFCSL  243 (494)
Q Consensus       214 lv~~~~~~~~~a~lv~IN~~p~~~h~~a~l  243 (494)
                      |++.+  ...++++|+||.+|+.....+.+
T Consensus       233 ~~~~a--~~~g~~~i~IN~~~t~~~~~~~~  260 (285)
T PRK05333        233 FCVWA--AQQGKPIAALNLGRTRADPLLTL  260 (285)
T ss_pred             hHHHH--HHCCCeEEEECCCCCCCCcceeE
Confidence            99887  45577999999999987765533

>cd00296 SIR2 SIR2 superfamily of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose

Probab=100.00  E-value=3.2e-43  Score=341.58  Aligned_cols=200  Identities=37%  Similarity=0.609  Sum_probs=176.2

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      +|++||||||||.++|+|+++......     ++.++|..+|+.||.|++++..                          
T Consensus        11 iS~~sGiP~fr~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--------------------------   59 (222)
T cd00296          11 ISTESGIPDFRGLGTGLWTRLDPEELA-----FSPEAFRRDPELFWLFYKERRY--------------------------   59 (222)
T ss_pred             cccccCCCCccccccchhhcCCccccc-----CCHHHHHHCHHHHHHHHHHHHh--------------------------
Confidence            689999999999944999986533221     5889999999999999887531                          


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCC
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI  160 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~  160 (494)
                        .+.+++||++|++|++|+++++.++|||||||+||++||++.++|+|+||++...+|..|++.++.++....   ..+
T Consensus        60 --~~~~~~P~~~H~~l~~l~~~~~~~~iiTqNiD~L~~~ag~~~~~v~~lHG~~~~~~C~~C~~~~~~~~~~~~---~~~  134 (222)
T cd00296          60 --TPLDAKPNPAHRALAELERKGKLKRIITQNVDGLHERAGSRRNRVIELHGSLDRVRCTSCGKEYPRDEVLER---EKP  134 (222)
T ss_pred             --hhCcCCCCHHHHHHHHHHHcCCCceEEecChHHHHHHhCCCcCcEEEecCCCCccEECCCCCCcchhhhhhc---cCC
Confidence              134678999999999999999999999999999999999988899999999999999999998876655432   569


Q ss_pred             CCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccc
Q psy11832        161 PTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQ  238 (494)
Q Consensus       161 P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h  238 (494)
                      |+||.|||.+||+|++|||.+|+..+..+.+++.++|++|+||||+.|+|+.++++.+  ...++++++||.+|+...
T Consensus       135 p~C~~C~~~l~p~v~~fge~~~~~~~~~~~~~~~~~d~llviGtSl~v~~~~~l~~~~--~~~~~~~~~in~~~~~~~  210 (222)
T cd00296         135 PRCPKCGGLLRPDVVDFGEALPKEWFDRALEALLEADLVLVIGTSLTVYPAARLLLRA--PERGAPVVIINREPTPAD  210 (222)
T ss_pred             CCCCCCCCcccCceEECCCCCCHHHHHHHHHHHhcCCEEEEECCCccccCHHHHHHHH--HHCCCcEEEECCCCCCCC
Confidence            9999999999999999999999988899999999999999999999999999999998  357899999999999875

Sir2 proteins, also known as sirtuins, are found in all eukaryotes and many archaea and prokaryotes and have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. The most-studied function, gene silencing, involves the inactivation of chromosome domains containing key regulatory genes by packaging them into a specialized chromatin structure that is inaccessible to DNA-binding proteins. The oligomerization state of Sir2 appears to be organism-dependent, sometimes occurring as a monomer and sometimes as a multimer. Also included in this superfamily is a group of uncharacterized Sir2-like proteins which lack certain key catalytic

>KOG2684|consensus

Probab=100.00  E-value=1.2e-43  Score=359.53  Aligned_cols=202  Identities=44%  Similarity=0.810  Sum_probs=183.5

Q ss_pred             cccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhcc
Q psy11832          2 FGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFTQ   81 (494)
Q Consensus         2 ~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~~   81 (494)
                      +|+||||||||. +|+|..+++.++++|.++|++++|+.+|..||+|.+.+++..+.                       
T Consensus       100 Svs~GIPDFRSs-~G~ys~l~~~~l~sp~~mFd~~~fr~d~~~F~~~a~~l~~~~~~-----------------------  155 (412)
T KOG2684|consen  100 SVSAGIPDFRSS-EGIYSKLKAPDLPSPQAMFDISYFRDDPSIFYRFARELKPPSNN-----------------------  155 (412)
T ss_pred             eeecCCCCcccc-ccHHHHhhcccCCCHHHhccchhhhcccHHHHHHHHHhcCCccC-----------------------
Confidence            689999999999 69999999999999999999999999999999999998875443                       


Q ss_pred             cccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCCC
Q psy11832         82 VYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIP  161 (494)
Q Consensus        82 ~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~P  161 (494)
                             |++.|.+|+.|+++|++.++||||||+|+++||...++++++|||+.+..|.+|+..++.+.+.+.+....+|
T Consensus       156 -------ps~~H~Fi~~L~~~gkLlR~YTQNID~LE~~aGl~~~~lVq~HGSf~t~sCt~C~~k~~~~~~~~~~~~~~vp  228 (412)
T KOG2684|consen  156 -------PSAFHEFIKLLEKKGKLLRNYTQNIDGLERKAGLSTNKLVQCHGSFKTASCTKCGYKKPFEELREDIRNQEVP  228 (412)
T ss_pred             -------CchHHHHHHHHHhcCceeEEeecccchhhhccCCCcCceEEeccccceeeecccccccChHHHHHHHhcCcCc
Confidence                   5555666666999999999999999999999999888899999999999999999999999888888889999


Q ss_pred             CCCCCCC------------------eeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCC
Q psy11832        162 TCEKCNG------------------LVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFP  223 (494)
Q Consensus       162 ~C~~Cgg------------------~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~  223 (494)
                      .||.|.+                  .|||+||||||.+|+.++.........+|++|||||||.|+|++.+++.++   +
T Consensus       229 ~CP~C~~~~~~r~~~g~r~~~~~vgvlrP~IvffgE~lP~~~~~~~~~d~d~~DllIviGTSLKV~pV~~iv~~~~---~  305 (412)
T KOG2684|consen  229 VCPDCEGKNEKRRGAGKRCESEGVGVLRPDIVFFGENLPDSFHIGVGADLDECDLLIVIGTSLKVRPVAEIVKSFP---A  305 (412)
T ss_pred             cCcccccccccccCccccccccCccccccceEEecCCCChHHHhhhhccccccceEEEeCCccccccHHHHHhhhc---c
Confidence            9999975                  899999999999999999888888888999999999999999999999994   4


Q ss_pred             CceEEEEecccccc
Q psy11832        224 KADLLLIMGTSLVV  237 (494)
Q Consensus       224 ~a~lv~IN~~p~~~  237 (494)
                      +...|.||.+|...
T Consensus       306 ~vpqIliNr~~v~h  319 (412)
T KOG2684|consen  306 KVPQILINRDPVPH  319 (412)
T ss_pred             cCcEEEecCccccc
Confidence            55789999886663

>PTZ00410 NAD-dependent SIR2; Provisional

Probab=100.00  E-value=2.5e-40  Score=337.11  Aligned_cols=218  Identities=27%  Similarity=0.370  Sum_probs=154.0

Q ss_pred             ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832        231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG  309 (494)
Q Consensus       231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c  309 (494)
                      ..+|+..|... .|+++|++.++|||||||||++||+++++|||+|||+++.+|++|++.|+.+.+...+...  .+|.|
T Consensus        97 ~a~Pn~aH~aLa~Le~~G~l~~vITQNIDgLh~rAG~~~~~ViElHGsl~~~~C~~C~~~~~~~~~~~~~~~~--~vP~C  174 (349)
T PTZ00410         97 HFQPTAVHHFIRLLADEGRLLRCCTQNIDGLERAAGVPPSLLVEAHGSFSAASCIECHTPYDIEQAYLEARSG--KVPHC  174 (349)
T ss_pred             cCCCCHHHHHHHHHHhcCCcceEEecchhhhHhhcCCCcccEEEeccCCCeeEeCCCCCCcchhHHHHHhhcC--CCCCC
Confidence            35788888875 6888999999999999999999999999999999999999999999999988765544333  35889


Q ss_pred             CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhcccCCCCCCCCCCcccEEE-eC
Q psy11832        310 LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFL-EG  386 (494)
Q Consensus       310 ~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~~g~~~~~~~~~~dl~i-~g  386 (494)
                      +.|+|   ++||+|||  |.+|..+.. +.+.+++||+||||||||+|   +|++.++..+.       ....-++| .+
T Consensus       175 ~~CgG---~lRPdVVlFGE~lp~~~~~-a~~~~~~aDllLVIGTSL~V---~Paa~l~~~a~-------~~~pvviIN~e  240 (349)
T PTZ00410        175 STCGG---IVKPDVVFFGENLPDAFFN-VHHDIPEAELLLIIGTSLQV---HPFALLACVVP-------KDVPRVLFNLE  240 (349)
T ss_pred             CCCCC---ccCCcEEecCCcCCHHHHH-HHHHHHhCCEEEEECcCCcc---cCHHHHHHHHh-------cCCCEEEECcc
Confidence            99998   58888887  677877777 88888999999999999999   99998875431       11112222 23


Q ss_pred             ChhHHHHHHHHHhCCCchHH----HhhcCccccCCCCCCCccceEEeCCcHHHHHHHHHHcCCchhhhhhhcccCCC---
Q psy11832        387 DCDSGCQKLADMLGWGIPLM----GLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGL---  459 (494)
Q Consensus       387 ~~~~~~~~L~~~lg~~~~~~----~l~~~~~~~~f~~~~~~~Dv~~lgdcD~~~~~l~~~lgW~~el~~l~~~~~~~---  459 (494)
                      .++...-+++     .+++.    .++.+..+..+.+.-+..|                        .....-++|+   
T Consensus       241 ~~~~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~g~~~~  291 (349)
T PTZ00410        241 RVGGLMFRFP-----TDPLTTFHADSVAKEGRSSSSSSRSSSD------------------------SSTSSSSDGYGQF  291 (349)
T ss_pred             ccCCceeecc-----CCccccchhhhhhhcccCcccccccccc------------------------ccccccccccccc
Confidence            3322211111     01111    1111222222221111111                        1122333444   


Q ss_pred             ---CCccccccccceeccccchhHHHHHHHhccCccc
Q psy11832        460 ---GFDNENNVRDVFLEGDCDSGCQKLADMLGWGKDI  493 (494)
Q Consensus       460 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (494)
                         +.|..+++|||||.||||.||.+||++|||++||
T Consensus       292 ~~~~~~~~~~~~d~~~~g~~~~~~~~~~~~lg~~~~l  328 (349)
T PTZ00410        292 GDYEADPGGVCRDIFFPGDCQESVRRLAEALGLGEAL  328 (349)
T ss_pred             cccccCccccccceeecccchHHHHHHHHHhCcHHHH
Confidence               3488899999999999999999999999999886

>KOG2683|consensus

Probab=100.00  E-value=8.2e-38  Score=295.19  Aligned_cols=206  Identities=27%  Similarity=0.448  Sum_probs=169.6

Q ss_pred             cccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHH--HHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhh
Q psy11832          2 FGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEA--FYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHF   79 (494)
Q Consensus         2 ~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~--f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~   79 (494)
                      +|+||||||||++-|+|++...    .|  +...+|.++++..  ||.  |.+.                          
T Consensus        57 STEsGIPDYRS~~VGlYars~~----kP--I~hqdf~rSs~~RqRYWa--Rnf~--------------------------  102 (305)
T KOG2683|consen   57 STESGIPDYRSEDVGLYARSAH----KP--IQHQDFVRSSRCRQRYWA--RNFV--------------------------  102 (305)
T ss_pred             cccCCCCcccCCCccceeecCC----Cc--chHHHHhhhhHHHHHHHH--Hhhc--------------------------
Confidence            7999999999996699985321    12  2233455555543  444  2222                          


Q ss_pred             cccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHH----
Q psy11832         80 TQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERI----  155 (494)
Q Consensus        80 ~~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i----  155 (494)
                      .|.-+..++||++|.||++|++.++.+++||||||+||.|||+  +.|.|+||+.....|..|+...+...+.+++    
T Consensus       103 gWprFs~aqPn~~H~ALs~wE~~~r~~wliTQNVD~LH~kAGS--~~~tElHG~~~~VkCl~C~y~~~R~~~Qdrl~~~N  180 (305)
T KOG2683|consen  103 GWPRFSAAQPNPAHYALSKWEKAGRFQWLITQNVDRLHTKAGS--RMVTELHGSAYQVKCLSCGYIEPRQTFQDRLKYLN  180 (305)
T ss_pred             CcchhhhcCCCchhHHHHHHhhcCceEEEeeccchhhhhhccc--cceeeeccceEEEEecccCcccchHHHHHHHHhcC
Confidence            2333577899999999999999999999999999999999994  7899999999999999999988765544322    


Q ss_pred             --------------------------hhcCCCCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChh
Q psy11832        156 --------------------------FAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQ  209 (494)
Q Consensus       156 --------------------------~~~~~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~  209 (494)
                                                ....+|.|++|||.|||+|+||||+++.+..+.+.+.+.+||-+||+||||.|+
T Consensus       181 P~fke~~~~~~~~~pDgDv~lpl~~e~gF~IPeC~~CgG~lKpdV~fFGdnvn~dkv~~~~~~v~e~dg~LvlGsSL~v~  260 (305)
T KOG2683|consen  181 PGFKEAIVSPGHQRPDGDVELPLEFEEGFQIPECEKCGGLLKPDVTFFGDNVNKDKVTFCMEKVKECDGFLVLGSSLMVL  260 (305)
T ss_pred             cchhhhccCccccCCCCCeecchhhhhcccCCcccccCCccCCceEEecCCCChHHHHHHHHHHhccCceEEechhHHHH
Confidence                                      012589999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhhhcCCCceEEEEecccccccccccccc
Q psy11832        210 PFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSLVD  245 (494)
Q Consensus       210 pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~~a~l~~  245 (494)
                      ...+++..+  ...+..+-++|-.||-...+|.|.-
T Consensus       261 Sg~r~i~~a--~~~k~pi~IvNIGpTRaD~~a~lKl  294 (305)
T KOG2683|consen  261 SGFRFIRHA--HEKKKPIAIVNIGPTRADDMATLKL  294 (305)
T ss_pred             HHHHHHHHH--HhhcCcEEEEecCCcchhheeeeee
Confidence            999999998  5667888899999999888886543

>KOG2684|consensus

Probab=100.00  E-value=9.9e-35  Score=294.81  Aligned_cols=196  Identities=25%  Similarity=0.348  Sum_probs=157.2

Q ss_pred             hhhhhhhhhhhhcCCCceEEEEeccccccccccc-ccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCC
Q psy11832        209 QPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCS-LVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCR  287 (494)
Q Consensus       209 ~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~~a~-l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~  287 (494)
                      +++..|++..   +|+      +..|+..|.+.+ |+++|+++|+|||||||||++||+...+|||+||||++++|++|+
T Consensus       140 ~~F~~~a~~l---~~~------~~~ps~~H~Fi~~L~~~gkLlR~YTQNID~LE~~aGl~~~~lVq~HGSf~t~sCt~C~  210 (412)
T KOG2684|consen  140 SIFYRFAREL---KPP------SNNPSAFHEFIKLLEKKGKLLRNYTQNIDGLERKAGLSTNKLVQCHGSFKTASCTKCG  210 (412)
T ss_pred             HHHHHHHHHh---cCC------ccCCchHHHHHHHHHhcCceeEEeecccchhhhccCCCcCceEEeccccceeeecccc
Confidence            4566666665   444      334999999995 778899999999999999999999988999999999999999999


Q ss_pred             CccchHHHHhhhccCCCCCCccCCCCCC---------------CCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEec
Q psy11832        288 KDYSVAWMKEGNLLGRMGITLGLHAGGL---------------SSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINK  350 (494)
Q Consensus       288 ~~y~~~~~~~~i~~~~~~~p~c~~C~g~---------------~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~G  350 (494)
                      ..++.+.+++.+...++  |.||.|.+.               .+++||+|||  |.+|..++.........||||||||
T Consensus       211 ~k~~~~~~~~~~~~~~v--p~CP~C~~~~~~r~~~g~r~~~~~vgvlrP~IvffgE~lP~~~~~~~~~d~d~~DllIviG  288 (412)
T KOG2684|consen  211 YKKPFEELREDIRNQEV--PVCPDCEGKNEKRRGAGKRCESEGVGVLRPDIVFFGENLPDSFHIGVGADLDECDLLIVIG  288 (412)
T ss_pred             cccChHHHHHHHhcCcC--ccCcccccccccccCccccccccCccccccceEEecCCCChHHHhhhhccccccceEEEeC
Confidence            99999999887776554  788999641               2478899998  7889999998888888999999999


Q ss_pred             cccccCCCCcchhhhcccCCCCCCCCCCcccEEEeCChhHHHHHHHHHhCCCchHHHhhcCccccCCCCCCCccceEEeC
Q psy11832        351 EKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEG  430 (494)
Q Consensus       351 TSl~V~~~~P~a~l~~~~~g~~~~~~~~~~dl~i~g~~~~~~~~L~~~lg~~~~~~~l~~~~~~~~f~~~~~~~Dv~~lg  430 (494)
                      |||+|   .|++.++...     .               ..+|+            .++|+....+     ..+|+.++|
T Consensus       289 TSLKV---~pV~~iv~~~-----~---------------~~vpq------------IliNr~~v~h-----~efd~~ll~  328 (412)
T KOG2684|consen  289 TSLKV---RPVAEIVKSF-----P---------------AKVPQ------------ILINRDPVPH-----AEFDVELLG  328 (412)
T ss_pred             Ccccc---ccHHHHHhhh-----c---------------ccCcE------------EEecCccccc-----cccChhhcc
Confidence            99999   8877775321     0               00111            1334333333     338999999


Q ss_pred             CcHHHHHHHHHHcCCchhhhhhhcc
Q psy11832        431 DCDSGCQKLADMLGWGIPLMGLLGL  455 (494)
Q Consensus       431 dcD~~~~~l~~~lgW~~el~~l~~~  455 (494)
                      |||+++..++..+||..+++++-.+
T Consensus       329 ~CD~v~~~l~~~~g~~~~~~~~~~l  353 (412)
T KOG2684|consen  329 DCDDVIRLLCQKCGWLKPLLSLNDL  353 (412)
T ss_pred             chHHHHHHHHhhccccchHhhhhhh
Confidence            9999999999999999988888744

>KOG1905|consensus

Probab=100.00  E-value=5.7e-35  Score=284.17  Aligned_cols=199  Identities=27%  Similarity=0.398  Sum_probs=168.6

Q ss_pred             cccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhcc
Q psy11832          2 FGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFTQ   81 (494)
Q Consensus         2 ~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~~   81 (494)
                      +|+||||||||+ .|+|+..++..-  ..                                                  .
T Consensus        67 STaa~IPDfRGp-~GVWTL~~kG~~--~~--------------------------------------------------~   93 (353)
T KOG1905|consen   67 STAAGIPDFRGP-QGVWTLQQKGKD--KF--------------------------------------------------G   93 (353)
T ss_pred             ccccCCCCccCC-CceeehhhcCcc--cc--------------------------------------------------C
Confidence            799999999999 699997654221  00                                                  1


Q ss_pred             cccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHh-----
Q psy11832         82 VYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIF-----  156 (494)
Q Consensus        82 ~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~-----  156 (494)
                      ..+..|.|+.+|++|.+|++.|++.+||||||||||.|+|+|.+++.|+|||++..+|.+|..+|-++...+.+.     
T Consensus        94 ~df~~ArPt~THmai~~Lhr~gll~~viSQNvDGLhlrsGlPr~~LsElHGNmfiEvC~sC~~~yvr~~~v~t~gl~at~  173 (353)
T KOG1905|consen   94 VDFSEARPTVTHMAIVALHRAGLLKHVISQNVDGLHLRSGLPREKLSELHGNMFIEVCKSCRPEYVRDRVVDTVGLKATG  173 (353)
T ss_pred             CchhhcCCcchHHHHHHHHHcchhhhhhhccccchhhccCCCHHHHHHHhcchHHHHhhhhcccceehhheeeccccccc
Confidence            124568999999999999999999999999999999999999999999999999999999999987766554331     


Q ss_pred             -hcCCCC---CCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEec
Q psy11832        157 -AEVIPT---CEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMG  232 (494)
Q Consensus       157 -~~~~P~---C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~  232 (494)
                       .-..-+   |..|.|.++..++-+...+|...|+.|.++.+.||++|++||||+|-|...++-.+  ...+.++++||+
T Consensus       174 R~ct~~k~~~~rscrg~l~d~~ldwe~~lpln~l~~a~~a~~~Ad~~lcLGTSLqI~p~g~lpl~~--~k~g~K~~ivNl  251 (353)
T KOG1905|consen  174 RHCTGRKCRKCRSCRGTLRDFGLDWEDELPLNDLDRATKAAKRADLILCLGTSLQILPKGNLPLKM--KKRGGKIVIVNL  251 (353)
T ss_pred             ccccccccccccccccchhhccccccccCCchhhHHHHHHhhhcceEEEeccceEeeeCCCcchhH--hccCceEEEEeC
Confidence             113334   55666888999999999999999999999999999999999999999999999888  458899999999


Q ss_pred             ccccccccccccccccccCCCCc
Q psy11832        233 TSLVVQPFCSLVDKTNIRGSDSD  255 (494)
Q Consensus       233 ~p~~~h~~a~l~~~~~l~~v~TQ  255 (494)
                      ++|...+.|++.-+|+..-|.++
T Consensus       252 Q~T~hDk~A~l~Ihg~vd~Vm~~  274 (353)
T KOG1905|consen  252 QWTPHDKIANLKIHGKVDLVMAS  274 (353)
T ss_pred             ccCcccchhheeehhhHHHHHHH
Confidence            99999999999988876655443

>KOG2682|consensus

Probab=99.97  E-value=1e-31  Score=254.15  Aligned_cols=111  Identities=66%  Similarity=1.216  Sum_probs=108.2

Q ss_pred             EEeccccchHHhcCCCCCCEEEecCCcCccccC-CCCcccchHHHHHHHhhcCCCCCCCCCCeeeeeEEecCCCCChHHH
Q psy11832        108 HFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCL-TCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRYF  186 (494)
Q Consensus       108 iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~-~C~~~~~~~~~~~~i~~~~~P~C~~Cgg~lrP~Vv~FgE~~~~~~~  186 (494)
                      +||||||+|.+.||+|.+.++|.||++...+|. .|++.|+.+|++..+....+|+|+.|+|.+||+||||||++|.+++
T Consensus       124 ~YTQNIDtLER~aGv~d~~lvEAHGtFa~s~Ci~~C~~~yp~e~~ka~i~~~~vpkC~vC~~lVKP~IVFfGE~LP~rF~  203 (314)
T KOG2682|consen  124 CYTQNIDTLERIAGVPDEDLVEAHGTFATSHCISSCRHEYPLEWMKAKIMSEVVPKCEVCQGLVKPDIVFFGESLPARFF  203 (314)
T ss_pred             HHhccchHHHHhcCCCHHHHHHhccceeeeeehhhhcCcCCHHHHHHHHHhccCCCCchhhccccccEEEecCCccHHHH
Confidence            799999999999999999999999999999999 5999999999999999999999999999999999999999999999


Q ss_pred             HHHHhHcCCCCeEEEeCcCCChhhhhhhhhhh
Q psy11832        187 HRVDVDFPKADLLLIMGTSLVVQPFCSLVDKV  218 (494)
Q Consensus       187 ~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~  218 (494)
                      +-.......+|++|||||||.|+|++++++.+
T Consensus       204 e~~~~D~~~~dl~lV~GTSL~V~PFAsLpe~v  235 (314)
T KOG2682|consen  204 ECMQSDFLKVDLLLVMGTSLQVQPFASLPEKV  235 (314)
T ss_pred             HHHhhcccccceEEEeccceeeeecccchhhh
Confidence            99999999999999999999999999999887

>PRK14138 NAD-dependent deacetylase; Provisional

Probab=99.96  E-value=1.7e-30  Score=256.17  Aligned_cols=161  Identities=19%  Similarity=0.210  Sum_probs=135.0

Q ss_pred             ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832        231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG  309 (494)
Q Consensus       231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c  309 (494)
                      +.+|+..|.+. .|+++|++.+||||||||||++||  +++|+|+|||+.+.+|++|++.|+.+.+.+.+...  ..|.|
T Consensus        71 ~~~Pn~~H~ala~L~~~g~~~~viTQNIDgLh~~aG--~~~VielHG~~~~~~C~~C~~~~~~~~~~~~~~~~--~~p~C  146 (244)
T PRK14138         71 EAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQKAG--SKKVIELHGNVEEYYCVRCGKRYTVEDVIEKLEKS--DVPRC  146 (244)
T ss_pred             cCCCCHHHHHHHHHHHcCCceEEEeecccChhhHcC--CCeEEEccCCcCeeEECCCCCcccHHHHHHHHhcC--CCCCC
Confidence            56788888875 688889999999999999999999  78999999999999999999999988776543222  35889


Q ss_pred             CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhccc--CCC-------CCCCCCC
Q psy11832        310 LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLS--EGL-------GFDNENN  378 (494)
Q Consensus       310 ~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~--~g~-------~~~~~~~  378 (494)
                      |.|+|   ..||+|||  |++|..+++.+.+.+.+||++|||||||.|   +|++.|+..+  .|.       +.++.+.
T Consensus       147 p~Cgg---~lrP~Vv~FgE~~p~~~~~~~~~~~~~aDl~lviGTSl~V---~pa~~l~~~~~~~g~~~i~iN~~~t~~d~  220 (244)
T PRK14138        147 DDCSG---LIRPNIVFFGEALPQDALREAIRLSSKASLMIVMGSSLVV---YPAAELPLITVRSGGKLVIVNLGETPLDD  220 (244)
T ss_pred             CCCCC---eECCCEEECCCcCCHHHHHHHHHHHhcCCEEEEeCcCCee---ecHhHHHHHHHHcCCeEEEEcCCCCCCCc
Confidence            99998   47788777  677887888888889999999999999999   9999987543  233       3344567


Q ss_pred             cccEEEeCChhHHHHHHHHHhCC
Q psy11832        379 VRDVFLEGDCDSGCQKLADMLGW  401 (494)
Q Consensus       379 ~~dl~i~g~~~~~~~~L~~~lg~  401 (494)
                      .+|++|+|++++.+++|++.+|.
T Consensus       221 ~~~~~i~~~~~~~l~~l~~~~~~  243 (244)
T PRK14138        221 IATLKYNMDVVEFANRVMSEGGI  243 (244)
T ss_pred             ceeEEEeCCHHHHHHHHHHHhCC
Confidence            79999999999999999998873

>cd01408 SIRT1 SIRT1: Eukaryotic group (class1) which includes human sirtuins SIRT1-3 and yeast Hst1-4; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation

Probab=99.96  E-value=2.1e-30  Score=254.31  Aligned_cols=157  Identities=32%  Similarity=0.490  Sum_probs=129.6

Q ss_pred             ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832        231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG  309 (494)
Q Consensus       231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c  309 (494)
                      +.+|+..|... .|+++|++..+|||||||||++||.++++|+|+|||+++.+|+.|++.|+.+++...+...  ..|.|
T Consensus        66 ~a~Pn~~H~~la~L~~~g~~~~viTQNiD~Lh~raG~~~~~V~elHG~l~~~~C~~C~~~~~~~~~~~~~~~~--~~p~C  143 (235)
T cd01408          66 QFKPSVAHYFIKLLEDKGLLLRNYTQNIDTLERVAGVPDDRIIEAHGSFATAHCIKCKHKYPGDWMREDIFNQ--EVPKC  143 (235)
T ss_pred             cCCCCHHHHHHHHHHhcCCceEEEEeccchHHHHcCCCccCEEEeCcCCCccccccCCCcCCHHHHHHHHhCC--CCccC
Confidence            56888888875 7888898999999999999999999889999999999999999999999998877655332  25889


Q ss_pred             CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhcccC-CC-------CCCCCC--
Q psy11832        310 LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSE-GL-------GFDNEN--  377 (494)
Q Consensus       310 ~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~~-g~-------~~~~~~--  377 (494)
                      +.|+|   ++||+|||  |.+|......+.+.+++||++||+||||+|   +|+++|+..+. |.       +.+..+  
T Consensus       144 ~~Cgg---~lrP~Vv~FGE~lp~~~~~~~~~~~~~aDlllvvGTSl~V---~pa~~l~~~~~~~~~~v~iN~~~~~~~~~  217 (235)
T cd01408         144 PRCGG---LVKPDIVFFGESLPSRFFSHMEEDKEEADLLIVIGTSLKV---APFASLPSRVPSEVPRVLINREPVGHLGK  217 (235)
T ss_pred             CCCCC---CccCcEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCee---ccHHHHHHHHhCCCcEEEEeCCCCCCCCC
Confidence            99998   47788887  567777777777888899999999999999   99999875431 22       223333  


Q ss_pred             CcccEEEeCChhHHHHHH
Q psy11832        378 NVRDVFLEGDCDSGCQKL  395 (494)
Q Consensus       378 ~~~dl~i~g~~~~~~~~L  395 (494)
                      ..+|++|+|++++++++|
T Consensus       218 ~~~d~~~~~~~~~~l~~~  235 (235)
T cd01408         218 RPFDVALLGDCDDGVREL  235 (235)
T ss_pred             CCcCEEEeCCHHHHHHhC
Confidence            678999999999998875

Sir2 proteins have been shown to regulate gene silencing, DNA repair, and life span. The most-studied function, gene silencing, involves the inactivation of chromosome domains containing key regulatory genes by packaging them into a specialized chromatin structure that is inaccessible to DNA-binding proteins. The nuclear SIRT1 has been shown to target the p53 tumor suppressor protein for deacetylation to suppress DNA damage, and the cytoplasmic SIRT2 homolog has been shown to target alpha-tubulin for deacetylation for the maintenance of cell integrity.

>cd01409 SIRT4 SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation

Probab=99.96  E-value=1.8e-30  Score=258.13  Aligned_cols=153  Identities=20%  Similarity=0.255  Sum_probs=124.7

Q ss_pred             ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhcc--------
Q psy11832        231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLL--------  301 (494)
Q Consensus       231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~--------  301 (494)
                      +.+|+..|... .|+++|++.++|||||||||++||  +++|||+|||+++.+|++|+++|+.+++.+.+..        
T Consensus        70 ~~~Pn~~H~~la~L~~~g~~~~viTQNIDgLh~~aG--~~~vielHG~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~  147 (260)
T cd01409          70 AAQPNAAHRALAALEAAGRLHGLITQNVDGLHTKAG--SRNVVELHGSLHRVVCLSCGFRTPRAELQDRLEALNPGFAEQ  147 (260)
T ss_pred             cCCCCHHHHHHHHHHHcCCCeeEEeeccchhHHHcC--CCCEEEEeeecCEEEeCCCcCccCHHHHHHHHhhcCcchhhh
Confidence            45788888774 788889999999999999999999  5899999999999999999999998776543211        


Q ss_pred             -----------------CCCCCCccCCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcch
Q psy11832        302 -----------------GRMGITLGLHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLM  362 (494)
Q Consensus       302 -----------------~~~~~p~c~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a  362 (494)
                                       .....|.|+.|+|   ++||+|||  |++|..++..+.+.+++||++|||||||.|   +|++
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~p~C~~Cgg---~lrP~VV~FGE~lp~~~~~~a~~~~~~aDlllviGTSl~V---~pa~  221 (260)
T cd01409         148 AAGQAPDGDVDLEDEQVAGFRVPECERCGG---VLKPDVVFFGENVPRDRVVTAAARLAEADALLVLGSSLMV---YSGY  221 (260)
T ss_pred             hcccCCCcccccchhhcccCCCCCCCCCCC---EECCCEEECCCCCCHHHHHHHHHHHhcCCEEEEeCcCcee---cchh
Confidence                             0112478999987   58888888  677888888999999999999999999999   9999


Q ss_pred             hhhccc--CCC-------CCCCCCCcccEEEeCChhHH
Q psy11832        363 GLLGLS--EGL-------GFDNENNVRDVFLEGDCDSG  391 (494)
Q Consensus       363 ~l~~~~--~g~-------~~~~~~~~~dl~i~g~~~~~  391 (494)
                      .++..+  .|.       +.+..+..+|+.|.|+++++
T Consensus       222 ~l~~~a~~~g~~viiIN~~~t~~d~~a~~~i~~~~~~~  259 (260)
T cd01409         222 RFVLAAAEAGLPIAIVNIGPTRADHLATLKVDARCGEV  259 (260)
T ss_pred             hHHHHHHHCCCcEEEEcCCCCCCCccccEEEeCChhhh
Confidence            988654  333       34445677899999999865

Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span.

>cd01410 SIRT7 SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation

Probab=99.96  E-value=4.1e-30  Score=247.42  Aligned_cols=149  Identities=22%  Similarity=0.202  Sum_probs=120.5

Q ss_pred             ccccccccc-ccccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCccC
Q psy11832        232 GTSLVVQPF-CSLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGL  310 (494)
Q Consensus       232 ~~p~~~h~~-a~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c~  310 (494)
                      .+|+..|.. ++|+++|++.++|||||||||++||.++++|+|+|||+++.+|++|++.|+.+++.+.+... ...|.|+
T Consensus        46 ~~Pn~~H~~La~l~~~g~~~~viTQNID~Lh~~AG~~~~~vielHG~~~~~~C~~C~~~~~~~~~~~~~~~~-~~~p~C~  124 (206)
T cd01410          46 AEPTLTHMALVELERAGLLKFVISQNVDGLHLRSGLPREKLSELHGNMFIEVCKSCGPEYVRDDVVETRGDK-ETGRRCH  124 (206)
T ss_pred             CCCCHHHHHHHHHHHCCCCceEEecCccchHhHcCcCcccEEEecCCcCcccCCCCCCccchHHHHHHhhcC-CCCCcCC
Confidence            467777776 47888899999999999999999999889999999999999999999999988776554322 2358899


Q ss_pred             CCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhccc--CCC-------CCCCCCCc
Q psy11832        311 HAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLS--EGL-------GFDNENNV  379 (494)
Q Consensus       311 ~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~--~g~-------~~~~~~~~  379 (494)
                      .|+|   +.||+|||  |++|..++..+.+.+++||+||||||||.|   +|+++|+..+  .|.       +.+..+..
T Consensus       125 ~Cgg---~lrP~VV~FgE~lp~~~~~~a~~~~~~aDlllviGTSl~V---~pa~~l~~~~~~~g~~vi~iN~~~~~~d~~  198 (206)
T cd01410         125 ACGG---ILKDTIVDFGERLPPENWMGAAAAACRADLFLCLGTSLQV---TPAANLPLKAARAGGRLVIVNLQPTPKDKL  198 (206)
T ss_pred             CCcC---ccCCcEEECCCCCCHHHHHHHHHHHhcCCEEEEECcCcee---hhHHHHHHHHHhcCCeEEEECCCCCCCCcc
Confidence            9998   47888888  567777788888899999999999999999   9999998543  233       23334456


Q ss_pred             ccEEEeCC
Q psy11832        380 RDVFLEGD  387 (494)
Q Consensus       380 ~dl~i~g~  387 (494)
                      +|++|+|+
T Consensus       199 ~d~~~~~~  206 (206)
T cd01410         199 ADLVIHGD  206 (206)
T ss_pred             ccEEEeCC
Confidence            77777664

Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span.

>COG0846 SIR2 NAD-dependent protein deacetylases, SIR2 family [Transcription]

Probab=99.96  E-value=3e-30  Score=253.38  Aligned_cols=160  Identities=22%  Similarity=0.208  Sum_probs=131.4

Q ss_pred             cccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCccC
Q psy11832        232 GTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGL  310 (494)
Q Consensus       232 ~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c~  310 (494)
                      .+|+..|.+. +|++++++.++|||||||||++||  +++|||+|||+.+.+|++|+..|+.+++...+..  ..+|.|+
T Consensus        75 a~Pn~~H~~la~le~~~~~~~iiTQNiD~Lhe~AG--s~~Vi~lHGsl~~~~C~~C~~~~~~~~~~~~~~~--~~~p~C~  150 (250)
T COG0846          75 AQPNKAHYALAELEDKGKLLRIITQNIDGLHERAG--SKNVIELHGSLKRVRCSKCGNQYYDEDVIKFIED--GLIPRCP  150 (250)
T ss_pred             CCCCHHHHHHHHHhhcCCceEEEecccchHHHHcC--CCcEEEeccceeeeEeCCCcCccchhhhhhhccc--CCCCcCc
Confidence            5788888877 688888899999999999999999  6799999999999999999999987775443322  2468999


Q ss_pred             CCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhccc--CCC-------CCCCCCCc
Q psy11832        311 HAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLS--EGL-------GFDNENNV  379 (494)
Q Consensus       311 ~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~--~g~-------~~~~~~~~  379 (494)
                      .|++.  ++||+|||  |++|..++..+.+..+.||+|||+|||+.|   +|++.++..+  .|.       +.+..+..
T Consensus       151 ~Cg~~--~lrP~VV~fGE~lp~~~~~~~~~~~~~~d~liviGTSl~V---~Paa~~p~~~~~~g~~~i~iN~~~~~~~~~  225 (250)
T COG0846         151 KCGGP--VLRPDVVWFGEPLPASFLDEALEALKEADLLIVIGTSLKV---YPAAGLPELAKRRGAKVIEINLEPTRLDPI  225 (250)
T ss_pred             cCCCc--cccCCEEEeCCCCCHHHHHHHHHHhccCCEEEEECcceEE---cChhhhhHHHHhcCCEEEEECCCcccCcch
Confidence            99994  46777777  678888888898888999999999999999   9999976533  233       23344577


Q ss_pred             ccEEEeCChhHHHHHHHHHhC
Q psy11832        380 RDVFLEGDCDSGCQKLADMLG  400 (494)
Q Consensus       380 ~dl~i~g~~~~~~~~L~~~lg  400 (494)
                      +|+.+++++++.++.|.+.+.
T Consensus       226 ~d~~i~~~a~~~~~~l~~~~~  246 (250)
T COG0846         226 ADEVIRGDAGEVLPLLLEELL  246 (250)
T ss_pred             hHHHHHhhHHHHHHHHHHHhh
Confidence            889999999999999987654

>PRK05333 NAD-dependent deacetylase; Provisional

Probab=99.95  E-value=4.1e-28  Score=244.59  Aligned_cols=163  Identities=18%  Similarity=0.200  Sum_probs=128.9

Q ss_pred             ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhcc--------
Q psy11832        231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLL--------  301 (494)
Q Consensus       231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~--------  301 (494)
                      +..|+..|... +|+++|++.+||||||||||++||  +++|+|+|||+.+.+|++|++.|+.+.+...+..        
T Consensus        80 ~~~Pn~~H~aLa~L~~~g~~~~viTQNIDgLh~rAG--~~~ViElHG~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~  157 (285)
T PRK05333         80 RAQPNAAHHALARLGAAGRIERLVTQNVDGLHQRAG--SRDVIELHGRLDGVRCMGCGARHPRAEIQHVLEAANPEWLAL  157 (285)
T ss_pred             cCCCCHHHHHHHHHHHcCCcccEEecccchhHHHcC--CCCEEeecCCcCEEEECCCCCcCCHHHHHHHHhhcCcchhhh
Confidence            55777777664 788889999999999999999999  7899999999999999999999987765433210        


Q ss_pred             -----------------CCCCCCccCCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcch
Q psy11832        302 -----------------GRMGITLGLHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLM  362 (494)
Q Consensus       302 -----------------~~~~~p~c~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a  362 (494)
                                       .....|.|+.|+|   ++||+|||  |.+|...+..+.+.+.+||++||||||+.|   .|++
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~iP~C~~Cgg---~lrP~Vv~FgE~lp~~~~~~a~~~~~~~DlllvvGTSl~V---~p~~  231 (285)
T PRK05333        158 EAAPAPDGDADLEWAAFDHFRVPACPACGG---ILKPDVVFFGENVPRERVAAARAALDAADAVLVVGSSLMV---YSGY  231 (285)
T ss_pred             hcccCCCccccccccccccCCCCCCCCCCC---cccCCEEEcCCCCCHHHHHHHHHHHhcCCEEEEECcCcee---cchh
Confidence                             0112588999998   47888887  667887888888888999999999999999   5665


Q ss_pred             hhhccc--CCC-------CCCCCCCcccEEEeCChhHHHHHHHHHhCC
Q psy11832        363 GLLGLS--EGL-------GFDNENNVRDVFLEGDCDSGCQKLADMLGW  401 (494)
Q Consensus       363 ~l~~~~--~g~-------~~~~~~~~~dl~i~g~~~~~~~~L~~~lg~  401 (494)
                      .++..+  .|.       +.+..+..+++.|.|++++++++|.+.||.
T Consensus       232 ~~~~~a~~~g~~~i~IN~~~t~~~~~~~~~i~g~~~evL~~l~~~l~~  279 (285)
T PRK05333        232 RFCVWAAQQGKPIAALNLGRTRADPLLTLKVEASCAQALAALVARLGL  279 (285)
T ss_pred             hhHHHHHHCCCeEEEECCCCCCCCcceeEEEeCCHHHHHHHHHHHhCC
Confidence            554332  222       233445667899999999999999998873

>PTZ00409 Sir2 (Silent Information Regulator) protein; Provisional

Probab=99.95  E-value=4.6e-28  Score=241.76  Aligned_cols=159  Identities=16%  Similarity=0.149  Sum_probs=122.3

Q ss_pred             eccccccccc-ccccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHh-hhcc-CCCCCC
Q psy11832        231 MGTSLVVQPF-CSLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKE-GNLL-GRMGIT  307 (494)
Q Consensus       231 N~~p~~~h~~-a~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~-~i~~-~~~~~p  307 (494)
                      +.+|+..|.. |.|+++|++..||||||||||++||  +++|+|+|||+++.+|++|++.|+.+.... .... ....+|
T Consensus        89 ~a~PN~~H~aLa~Le~~g~~~~vITQNIDgLh~rAG--s~~V~ElHG~l~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~P  166 (271)
T PTZ00409         89 EIELNPGHVALSTLESLGYLKFVVTQNVDGLHEESG--NTKVIPLHGSVFEARCCTCRKTIQLNKIMLQKTSHFMHQLPP  166 (271)
T ss_pred             cCCCCHHHHHHHHHHhcCCCcEEEeccccchHhHcC--CCcEEEeccCcCcceeCCCCCCcccCHHHHhhhhhhccCCCC
Confidence            3567777766 4788899999999999999999999  789999999999999999999987554321 1100 112247


Q ss_pred             ccCCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhccc--CCC-------CCCCC
Q psy11832        308 LGLHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLS--EGL-------GFDNE  376 (494)
Q Consensus       308 ~c~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~--~g~-------~~~~~  376 (494)
                      .|+ |+|   +.||+|||  |.+|...+..+.+.+++||+|||+||||+|   +|++.|+..+  .|.       +.+..
T Consensus       167 ~C~-Cgg---~lrP~VV~FGE~lp~~~~~~a~~~~~~aDlllviGTSl~V---~pa~~l~~~a~~~g~~vi~IN~~~t~~  239 (271)
T PTZ00409        167 ECP-CGG---IFKPNVILFGEVIPKSLLKQAEKEIDKCDLLLVVGTSSSV---STATNLCYRAHRKKKKIVEVNISKTYI  239 (271)
T ss_pred             CCC-CCC---cccCcEEEeCCcCCHHHHHHHHHHHHcCCEEEEECCCCcc---cCHHHHHHHHHHcCCCEEEECCCCCCC
Confidence            788 887   57888887  667887888888899999999999999999   9999998653  233       22332


Q ss_pred             C-CcccEEEeCChhHHHHHHHHHh
Q psy11832        377 N-NVRDVFLEGDCDSGCQKLADML  399 (494)
Q Consensus       377 ~-~~~dl~i~g~~~~~~~~L~~~l  399 (494)
                      + ..+|++|.|++++.+. +++.+
T Consensus       240 ~~~~~d~~i~~~~~~~~~-~~~~~  262 (271)
T PTZ00409        240 TNRISDYHVRAKFSELAQ-ISDIL  262 (271)
T ss_pred             CCccccEEEECcHHHHHH-HHHHh
Confidence            3 4579999999988774 54443

>PTZ00408 NAD-dependent deacetylase; Provisional

Probab=99.95  E-value=4.6e-28  Score=238.28  Aligned_cols=154  Identities=14%  Similarity=0.071  Sum_probs=118.6

Q ss_pred             eccccccccc-cccccc--ccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCC
Q psy11832        231 MGTSLVVQPF-CSLVDK--TNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGIT  307 (494)
Q Consensus       231 N~~p~~~h~~-a~l~~~--~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p  307 (494)
                      +.+|+..|.. ++|+++  +++..+|||||||||++||  +++|+|+|||+++.+|++|++.|+.+....      ...|
T Consensus        67 ~~~Pn~~H~~L~~Le~~~~~~~~~iiTQNiDgLh~~AG--~~~v~elHG~~~~~~C~~C~~~~~~~~~~~------~~~p  138 (242)
T PTZ00408         67 SVKPNKAHFALAKLEREYRGGKVVVVTQNVDNLHERAG--STHVLHMHGELLKVRCTATGHVFDWTEDVV------HGSS  138 (242)
T ss_pred             CCCCCHHHHHHHHHHHhhcCCcEEEEeecccchhhHcC--CCcEEEecCccceEEECCCCcccCchhhhh------cCCC
Confidence            4578888885 567765  6778999999999999999  689999999999999999999998654221      1247


Q ss_pred             ccCCCCCCCCCCCCcEEeccC---ChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhccc--CCC-------CCCC
Q psy11832        308 LGLHAGGLSSIPGGAEVFSAL---CLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLS--EGL-------GFDN  375 (494)
Q Consensus       308 ~c~~C~g~~~i~~p~ivfe~l---~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~--~g~-------~~~~  375 (494)
                      .|+.|+. .+..||+||||++   |.....   +.+.+||+||||||||+|   +|+++|+..+  .|.       +.+.
T Consensus       139 ~C~~Cg~-~g~lrP~vV~FGE~~~~~~~~~---~~~~~~DlllviGTSl~V---~pa~~l~~~a~~~g~~vi~IN~~~~~  211 (242)
T PTZ00408        139 RCKCCGC-VGTLRPHIVWFGEMPLYMDEIE---SVMSKTDLFVAVGTSGNV---YPAAGFVGRAQFYGATTLELNLEEGT  211 (242)
T ss_pred             ccccCCC-CCCCCCCEEEcCCCCCcHHHHH---HHHHhCCEEEEEccCCcc---ccHHHHHHHHHHcCCeEEEECCCCCC
Confidence            8888871 1268888888554   443333   347789999999999999   9999998654  343       2223


Q ss_pred             CCCcccEEEeCChhHHHHHHHHHh
Q psy11832        376 ENNVRDVFLEGDCDSGCQKLADML  399 (494)
Q Consensus       376 ~~~~~dl~i~g~~~~~~~~L~~~l  399 (494)
                      .+..+|+++.|++.+++++|++++
T Consensus       212 ~~~~~~~~i~g~~~~~l~~l~~~~  235 (242)
T PTZ00408        212 NYSQFDESIYGKASVIVPAWVDRV  235 (242)
T ss_pred             CCccCCEEEECCHHHHHHHHHHHH
Confidence            345678899999999999997765

>cd01413 SIR2_Af2 SIR2_Af2: Archaeal and prokaryotic group which includes Archaeoglobus fulgidus Sir2-Af2, Sulfolobus solfataricus ssSir2, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation

Probab=99.94  E-value=8e-28  Score=234.21  Aligned_cols=146  Identities=19%  Similarity=0.256  Sum_probs=117.3

Q ss_pred             eccccccccc-ccccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832        231 MGTSLVVQPF-CSLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG  309 (494)
Q Consensus       231 N~~p~~~h~~-a~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c  309 (494)
                      +.+|+..|.. ++|+++|++.+||||||||||++||  +++|+|+|||+++.+|++|++.|+.+.++. +..  ...|.|
T Consensus        65 ~a~Pn~~H~~La~L~~~~~~~~viTQNiDgLh~~AG--~~~v~elHG~l~~~~C~~C~~~~~~~~~~~-~~~--~~~p~C  139 (222)
T cd01413          65 EAQPNKAHYFLAELEKQGIIKAIITQNIDGLHQRAG--SKNVIELHGTLQTAYCVNCGSKYDLEEVKY-AKK--HEVPRC  139 (222)
T ss_pred             CCCCCHHHHHHHHHHhcCCCeEEEEeccchhhHHcC--CCcEEEccCCcCcceECCCCCCcchhHHHH-hcc--CCCCcC
Confidence            4577777766 4788889999999999999999999  789999999999999999999999887632 211  235889


Q ss_pred             CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhccc--CCC-------CCCCCCC
Q psy11832        310 LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLS--EGL-------GFDNENN  378 (494)
Q Consensus       310 ~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~--~g~-------~~~~~~~  378 (494)
                      +.|+|   +.||+|||  |.+|..++..+.+.+.+||++|||||||.|   +|++.|+..+  .|.       +.+..+.
T Consensus       140 ~~Cgg---~lrP~Vv~fgE~lp~~~~~~a~~~~~~~Dl~lvvGTSl~V---~p~~~l~~~a~~~g~~~i~iN~~~~~~~~  213 (222)
T cd01413         140 PKCGG---IIRPDVVLFGEPLPQALLREAIEAAKEADLFIVLGSSLVV---YPANLLPLIAKENGAKLVIVNADETPFDY  213 (222)
T ss_pred             CCCCC---ccCCCEEECCCCCCHHHHHHHHHHHhcCCEEEEEccCCEe---ccHhHHHHHHHHcCCeEEEEcCCCCCCCc
Confidence            99998   47888887  677888888888899999999999999999   9999988653  233       2233445


Q ss_pred             cccEEEeCC
Q psy11832        379 VRDVFLEGD  387 (494)
Q Consensus       379 ~~dl~i~g~  387 (494)
                      .+|++|.|+
T Consensus       214 ~~~~~i~~~  222 (222)
T cd01413         214 IADLVIQDK  222 (222)
T ss_pred             ceeEEEeCC
Confidence            577777663

Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. The Sir2 homolog from the archaea Sulfolobus solftaricus deacetylates the non-specific DNA protein Alba to mediate transcription repression.

>PRK00481 NAD-dependent deacetylase; Provisional

Probab=99.94  E-value=4e-27  Score=232.23  Aligned_cols=155  Identities=19%  Similarity=0.195  Sum_probs=126.5

Q ss_pred             eccccccccc-ccccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832        231 MGTSLVVQPF-CSLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG  309 (494)
Q Consensus       231 N~~p~~~h~~-a~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c  309 (494)
                      +.+|+..|.. ++|+++|++.++|||||||||++||  .++|+|+|||+.+.+|++|++.|+.+.+..      ...|.|
T Consensus        74 ~~~Pn~~H~~L~~L~~~~~~~~viTqNiD~L~~~aG--~~~v~elHG~~~~~~C~~C~~~~~~~~~~~------~~~p~C  145 (242)
T PRK00481         74 DAKPNAAHRALAELEKLGKLVTVITQNIDGLHERAG--SKNVIELHGSLLRARCTKCGQTYDLDEYLK------PEPPRC  145 (242)
T ss_pred             cCCCCHHHHHHHHHHhcCCCeEEEEeccchhHHHcC--CCceeeccCCcCceeeCCCCCCcChhhhcc------CCCCCC
Confidence            5678888865 4788889999999999999999999  689999999999999999999998776532      125679


Q ss_pred             CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhcc--cCCC-------CCCCCCC
Q psy11832        310 LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGL--SEGL-------GFDNENN  378 (494)
Q Consensus       310 ~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~--~~g~-------~~~~~~~  378 (494)
                      |.|+|   ..||+|||  |.+|...+..+.+..+++|++||+|||+.|   +|++.++..  ..+.       +.+..+.
T Consensus       146 ~~Cgg---~lrP~Vv~fge~~~~~~~~~a~~~~~~~dl~lviGTsl~V---~p~~~l~~~~~~~~~~~i~iN~~~~~~~~  219 (242)
T PRK00481        146 PKCGG---ILRPDVVLFGEMLPELAIDEAYEALEEADLFIVIGTSLVV---YPAAGLPYEAREHGAKTVEINLEPTPLDS  219 (242)
T ss_pred             CCCCC---ccCCCeEECCCCCCHHHHHHHHHHHhcCCEEEEECCCceE---cCHhHHHHHHHHCCCeEEEECCCCCCCCC
Confidence            99988   47788887  667777777788888899999999999999   899998852  2233       2222345


Q ss_pred             cccEEEeCChhHHHHHHHHHh
Q psy11832        379 VRDVFLEGDCDSGCQKLADML  399 (494)
Q Consensus       379 ~~dl~i~g~~~~~~~~L~~~l  399 (494)
                      .+|+.|.|++.+++++|++.+
T Consensus       220 ~~~~~i~~~~~~~l~~l~~~~  240 (242)
T PRK00481        220 LFDLVIHGKAGEVVPELVEEL  240 (242)
T ss_pred             ccCEEEECCHHHHHHHHHHHh
Confidence            589999999999999997765

>PF02146 SIR2: Sir2 family; InterPro: IPR003000 These sequences represent the Sirtuin (Sir2-related) family of NAD+-dependent deacetylases

Probab=99.94  E-value=5.7e-28  Score=227.49  Aligned_cols=117  Identities=21%  Similarity=0.212  Sum_probs=92.1

Q ss_pred             ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832        231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG  309 (494)
Q Consensus       231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c  309 (494)
                      ..+|+..|... +|++++++.+||||||||||++||+  ++|+|+|||+++.+|+.|++.|+.+.+...+...  ..|.|
T Consensus        57 ~a~Pn~~H~~La~L~~~g~~~~viTQNIDgLh~~AG~--~~vielHG~l~~~~C~~C~~~~~~~~~~~~~~~~--~~~~C  132 (178)
T PF02146_consen   57 DAEPNPGHRALAELEKKGKLKRVITQNIDGLHQKAGS--PKVIELHGSLFRLRCSKCGKEYDREDIVDSIDEE--EPPRC  132 (178)
T ss_dssp             TS---HHHHHHHHHHHTTSEEEEEES-SSSHHHHTTE--SCEEETTEEEEEEEETTTSBEEEGHHHHHHHHTT--SSCBC
T ss_pred             cCCCChhHHHHHHHHHhhhhccceecccchhhhcccc--hhhHHHHhhhceeeecCCCccccchhhccccccc--ccccc
Confidence            46788888776 6888999999999999999999995  4999999999999999999999988876655433  34688


Q ss_pred             CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEecccccc
Q psy11832        310 LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGV  355 (494)
Q Consensus       310 ~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V  355 (494)
                      +.|++   ++||+|||  |++| ..+..+.+.+..||++|||||||+|
T Consensus       133 ~~C~~---~lrp~vv~fgE~~~-~~~~~~~~~~~~~Dl~lviGTSl~V  176 (178)
T PF02146_consen  133 PKCGG---LLRPDVVLFGESLP-EEIEEAIEDAEEADLLLVIGTSLQV  176 (178)
T ss_dssp             TTTSC---BEEEEE--BTSB-S-HHHHHHHHHHHH-SEEEEESS-STS
T ss_pred             cccCc---cCCCCeeecCCCCH-HHHHHHHHHHHcCCEEEEEccCcEE
Confidence            99998   58888888  5667 5667777789999999999999999

This family of enzymes is broadly conserved from bacteria to humans. In yeast, Sir2 proteins form complexes with other proteins to silence chromatin by accessing histones and deacetylating them. Sir2 proteins have been proposed to play a role in silencing, chromosome stability and ageing []. The bacterial enzyme CobB, an homologue of Sir2, is a phosphoribosyltransferase []. An in vitro ADP ribosyltransferase activity has also been associated with human members of this family []. Sir2-like enzymes employ NAD+ as a cosubstrate in deacetylation reactions [] and catalyse a reaction in which the cleavage of NAD(+)and histone and/or protein deacetylation are coupled to the formation of O-acetyl-ADP-ribose, a novel metabolite. The dependence of the reaction on both NAD(+) and the generation of this potential second messenger offers new clues to understanding the function and regulation of nuclear, cytoplasmic and mitochondrial Sir2-like enzymes []. Silent Information Regulator protein of Saccharomyces cerevisiae (Sir2) is one of several factors critical for silencing at least three loci. Among them, it is unique because it silences the rDNA as well as the mating type loci and telomeres []. Sir2 interacts in a complex with itself and with Sir3 and Sir4, two proteins that are able to interact with nucleosomes. In addition Sir2 also interacts with ubiquitination factors and/or complexes []. Homologues of Sir2 share a core domain including the GAG and NID motifs and a putative C4 Zinc finger. The regions containing these three conserved motifs are individually essential for Sir2 silencing function, as are the four cysteins []. In addition, the conserved residues HG next to the putative Zn finger have been shown to be essential for the ADP ribosyltransferase activity []. ; GO: 0008270 zinc ion binding, 0070403 NAD+ binding, 0006476 protein deacetylation; PDB: 1S5P_A 3PKI_E 3PKJ_F 3K35_A 1ICI_A 1M2K_A 1M2G_A 1M2N_B 1M2H_A 1M2J_A ....

>cd01412 SIRT5_Af1_CobB SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E

Probab=99.93  E-value=7.3e-27  Score=227.76  Aligned_cols=151  Identities=18%  Similarity=0.141  Sum_probs=121.5

Q ss_pred             eccccccccc-ccccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832        231 MGTSLVVQPF-CSLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG  309 (494)
Q Consensus       231 N~~p~~~h~~-a~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c  309 (494)
                      +..|+..|.. ++|++++.+.++|||||||||++||.  ++|+|+|||+.+.+|+.|++.+..+...   .  ....|.|
T Consensus        61 ~~~Pn~~H~~L~~L~~~~~~~~viTqNiDgL~~~aG~--~~v~e~HG~~~~~~C~~C~~~~~~~~~~---~--~~~~p~C  133 (224)
T cd01412          61 RAQPNPAHLALAELERRLPNVLLITQNVDGLHERAGS--RNVIELHGSLFRVRCSSCGYVGENNEEI---P--EEELPRC  133 (224)
T ss_pred             ccCCCHHHHHHHHHHhcCCCeEEEEccchHhhHHhCC--CceEeeCCCcCccccCCCCCCCCcchhh---h--ccCCCCC
Confidence            4578888874 57888888899999999999999995  9999999999999999999998765321   1  1235889


Q ss_pred             CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhccc--CCC-------CCCCCCC
Q psy11832        310 LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLS--EGL-------GFDNENN  378 (494)
Q Consensus       310 ~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~--~g~-------~~~~~~~  378 (494)
                      +.|+|   ..+|+|||  |.+|. .+..+.+.++++|++||||||+.|   .|++.++..+  .+.       +.+..+.
T Consensus       134 ~~Cgg---~lrp~Vv~fge~~p~-~~~~~~~~~~~~dl~lvlGTsl~v---~p~~~l~~~~~~~~~~~i~iN~~~~~~~~  206 (224)
T cd01412         134 PKCGG---LLRPGVVWFGESLPL-ALLEAVEALAKADLFLVIGTSGVV---YPAAGLPEEAKERGARVIEINPEPTPLSP  206 (224)
T ss_pred             CCCCC---ccCCceEECCCCCHH-HHHHHHHHHHcCCEEEEECcCccc---hhHHHHHHHHHHCCCeEEEECCCCCCCCC
Confidence            99998   57888887  55555 567777788899999999999999   8999988643  233       2333456


Q ss_pred             cccEEEeCChhHHHHHH
Q psy11832        379 VRDVFLEGDCDSGCQKL  395 (494)
Q Consensus       379 ~~dl~i~g~~~~~~~~L  395 (494)
                      .+|+.|.|++++++++|
T Consensus       207 ~~~~~i~g~~~~~l~~l  223 (224)
T cd01412         207 IADFAFRGKAGEVLPAL  223 (224)
T ss_pred             cCCEEEECCHHHHHHHh
Confidence            78999999999999887

coli CobB; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. CobB is a bacterial sirtuin that deacetylates acetyl-CoA synthetase at an active site lysine to stimulate its enzymatic activity.

>cd01411 SIR2H SIR2H: Uncharacterized prokaryotic Sir2 homologs from several gram positive bacterial species and Fusobacteria; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation

Probab=99.93  E-value=3.5e-27  Score=230.12  Aligned_cols=142  Identities=19%  Similarity=0.235  Sum_probs=114.5

Q ss_pred             ecccccccc-cccccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832        231 MGTSLVVQP-FCSLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG  309 (494)
Q Consensus       231 N~~p~~~h~-~a~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c  309 (494)
                      +.+|+..|. +++|++++ +..||||||||||++||  +++|+|+|||+.+.+|++|++.|+.+.+.        ..|.|
T Consensus        71 ~~~Pn~~H~~La~L~~~~-~~~viTQNvD~Lh~~aG--~~~v~elHG~~~~~~C~~C~~~~~~~~~~--------~~p~C  139 (225)
T cd01411          71 DAKPNIIHQKMAELEKMG-LKAVITQNIDGLHQKAG--SKNVVEFHGSLYRIYCTVCGKTVDWEEYL--------KSPYH  139 (225)
T ss_pred             CCCCCHHHHHHHHHHHcC-CcEEEEeccchhhhhcC--CCcEEEeCCCcCeeEeCCCCCccchhhcC--------CCCCC
Confidence            457777777 45788777 88999999999999999  68999999999999999999998875432        24789


Q ss_pred             CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhcccC-CC-------CCCCCCCc
Q psy11832        310 LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSE-GL-------GFDNENNV  379 (494)
Q Consensus       310 ~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~~-g~-------~~~~~~~~  379 (494)
                      +.|+|   ++||+|||  |.+|...+..+.+..++||++||||||+.|   +|++.++.... |.       +.+..+..
T Consensus       140 ~~Cgg---~lrP~vv~fge~~~~~~~~~~~~~~~~~DlllviGTSl~v---~p~~~l~~~~~~~~~~i~iN~~~~~~~~~  213 (225)
T cd01411         140 AKCGG---VIRPDIVLYEEMLNESVIEEAIQAIEKADLLVIVGTSFVV---YPFAGLIDYRQAGANLIAINKEPTQLDSP  213 (225)
T ss_pred             CCCCC---EeCCCEEEcCCCCCHHHHHHHHHHHhcCCEEEEECcCCee---hhHHHHHHHHhCCCeEEEECCCCCCCCcc
Confidence            99998   58888887  677777788888888999999999999999   99999876543 33       23334455


Q ss_pred             ccEEEeCChhH
Q psy11832        380 RDVFLEGDCDS  390 (494)
Q Consensus       380 ~dl~i~g~~~~  390 (494)
                      +|++|.| +++
T Consensus       214 ~~~~~~~-~~~  223 (225)
T cd01411         214 ATLVIKD-AVK  223 (225)
T ss_pred             hhehhcc-hhh
Confidence            7778877 654

Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span.

>cd01407 SIR2-fam SIR2 family of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose

Probab=99.93  E-value=1.1e-26  Score=225.65  Aligned_cols=146  Identities=23%  Similarity=0.281  Sum_probs=114.9

Q ss_pred             eccccccccc-ccccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832        231 MGTSLVVQPF-CSLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG  309 (494)
Q Consensus       231 N~~p~~~h~~-a~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c  309 (494)
                      +.+|+..|.. ++|++++++.+||||||||||++||.  ++|+|+|||+.+.+|+.|++.++.+.+...+..  ...|.|
T Consensus        61 ~~~Pn~~H~~L~~L~~~~~~~~viTQNiDgL~~~aG~--~~v~elHG~~~~~~C~~C~~~~~~~~~~~~~~~--~~~p~C  136 (218)
T cd01407          61 NAQPNPAHRALAELERKGKLKRVITQNVDGLHQRAGS--PKVIELHGSLFRVRCTKCGKEYPRDELQADIDR--EEVPRC  136 (218)
T ss_pred             cCCCCHHHHHHHHHHhcCCCeeEEEeccchhHHHcCC--CCEEECcCCcCcceeCCCcCCCcHHHHhHhhcc--CCCCcC
Confidence            5688888865 47888899999999999999999995  499999999999999999999987765433322  235889


Q ss_pred             CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhcccC--CC-------CCCCCCC
Q psy11832        310 LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSE--GL-------GFDNENN  378 (494)
Q Consensus       310 ~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~~--g~-------~~~~~~~  378 (494)
                      |.|+|   ..||+|||  |.+|.. +..+.+...++|++||+|||+.|   +|++.++..+.  |.       +.+..+.
T Consensus       137 ~~Cg~---~lrP~Vv~fgE~~p~~-~~~a~~~~~~~Dl~lvlGTSl~V---~p~~~l~~~~~~~~~~~i~iN~~~~~~~~  209 (218)
T cd01407         137 PKCGG---LLRPDVVFFGESLPEE-LDEAAEALAKADLLLVIGTSLQV---YPAAGLPLYAPERGAPVVIINLEPTPADR  209 (218)
T ss_pred             CCCCC---ccCCCeEECCCCCcHH-HHHHHHHHhcCCEEEEeCCCccc---ccHHHHHHHHHHCCCeEEEECCCCCCCCc
Confidence            99998   48888887  667776 77777777889999999999999   89999976542  33       2223345


Q ss_pred             cccEEEeCC
Q psy11832        379 VRDVFLEGD  387 (494)
Q Consensus       379 ~~dl~i~g~  387 (494)
                      .+|+++.|+
T Consensus       210 ~~d~~~~~~  218 (218)
T cd01407         210 KADLVILGD  218 (218)
T ss_pred             cceEEEeCC
Confidence            567777653

Sir2 proteins, also known as sirtuins, are found in all eukaryotes and many archaea and prokaryotes and have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. The most-studied function, gene silencing, involves the inactivation of chromosome domains containing key regulatory genes by packaging them into a specialized chromatin structure that is inaccessible to DNA-binding proteins. The oligomerization state of Sir2 appears to be organism-dependent, sometimes occurring as a monomer and sometimes as a multimer.

>cd00296 SIR2 SIR2 superfamily of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose

Probab=99.89  E-value=2.4e-23  Score=202.18  Aligned_cols=127  Identities=23%  Similarity=0.229  Sum_probs=106.9

Q ss_pred             ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832        231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG  309 (494)
Q Consensus       231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c  309 (494)
                      +.+|+..|... +|.+++++.++||||||+||++||.+.++|+|+|||+.+.+|+.|++.|+.+.+...     ...|.|
T Consensus        63 ~~~P~~~H~~l~~l~~~~~~~~iiTqNiD~L~~~ag~~~~~v~~lHG~~~~~~C~~C~~~~~~~~~~~~-----~~~p~C  137 (222)
T cd00296          63 DAKPNPAHRALAELERKGKLKRIITQNVDGLHERAGSRRNRVIELHGSLDRVRCTSCGKEYPRDEVLER-----EKPPRC  137 (222)
T ss_pred             cCCCCHHHHHHHHHHHcCCCceEEecChHHHHHHhCCCcCcEEEecCCCCccEECCCCCCcchhhhhhc-----cCCCCC
Confidence            56788888875 688888899999999999999999888899999999999999999999988776543     346889


Q ss_pred             CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhccc
Q psy11832        310 LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLS  368 (494)
Q Consensus       310 ~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~  368 (494)
                      +.|+|.   .+|+|++  |.+|...+..+.+...++|++|++|||+.|   .|+..++..+
T Consensus       138 ~~C~~~---l~p~v~~fge~~~~~~~~~~~~~~~~~d~llviGtSl~v---~~~~~l~~~~  192 (222)
T cd00296         138 PKCGGL---LRPDVVDFGEALPKEWFDRALEALLEADLVLVIGTSLTV---YPAARLLLRA  192 (222)
T ss_pred             CCCCCc---ccCceEECCCCCCHHHHHHHHHHHhcCCEEEEECCCccc---cCHHHHHHHH
Confidence            999984   7778777  556666566777777789999999999999   8888887543

Sir2 proteins, also known as sirtuins, are found in all eukaryotes and many archaea and prokaryotes and have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. The most-studied function, gene silencing, involves the inactivation of chromosome domains containing key regulatory genes by packaging them into a specialized chromatin structure that is inaccessible to DNA-binding proteins. The oligomerization state of Sir2 appears to be organism-dependent, sometimes occurring as a monomer and sometimes as a multimer. Also included in this superfamily is a group of uncharacterized Sir2-like proteins which lack certain key catalytic

>KOG2683|consensus

Probab=99.84  E-value=7.9e-22  Score=187.06  Aligned_cols=155  Identities=14%  Similarity=0.142  Sum_probs=118.5

Q ss_pred             ccccccc-ccccccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhc----------
Q psy11832        232 GTSLVVQ-PFCSLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNL----------  300 (494)
Q Consensus       232 ~~p~~~h-~~a~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~----------  300 (494)
                      .+|...| .++.|++.+++..+||||+|+||.+||  |+.|.|+|||.++..|+.|+...+...+.+.+.          
T Consensus       110 aqPn~~H~ALs~wE~~~r~~wliTQNVD~LH~kAG--S~~~tElHG~~~~VkCl~C~y~~~R~~~Qdrl~~~NP~fke~~  187 (305)
T KOG2683|consen  110 AQPNPAHYALSKWEKAGRFQWLITQNVDRLHTKAG--SRMVTELHGSAYQVKCLSCGYIEPRQTFQDRLKYLNPGFKEAI  187 (305)
T ss_pred             cCCCchhHHHHHHhhcCceEEEeeccchhhhhhcc--ccceeeeccceEEEEecccCcccchHHHHHHHHhcCcchhhhc
Confidence            3455544 567899999999999999999999999  899999999999999999999988766554321          


Q ss_pred             -c-------C----------CCCCCccCCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCc
Q psy11832        301 -L-------G----------RMGITLGLHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNP  360 (494)
Q Consensus       301 -~-------~----------~~~~p~c~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P  360 (494)
                       .       +          .-.+|.|..|+|   ++||||+|  +++|.+-.....+.+.+||-+||+||||.|   ..
T Consensus       188 ~~~~~~~pDgDv~lpl~~e~gF~IPeC~~CgG---~lKpdV~fFGdnvn~dkv~~~~~~v~e~dg~LvlGsSL~v---~S  261 (305)
T KOG2683|consen  188 VSPGHQRPDGDVELPLEFEEGFQIPECEKCGG---LLKPDVTFFGDNVNKDKVTFCMEKVKECDGFLVLGSSLMV---LS  261 (305)
T ss_pred             cCccccCCCCCeecchhhhhcccCCcccccCC---ccCCceEEecCCCChHHHHHHHHHHhccCceEEechhHHH---HH
Confidence             0       0          013688889988   58999999  567777778888899999999999999999   33


Q ss_pred             chhhhcccC--CC-------CCCCCCCcccEEEeCChhHHHHH
Q psy11832        361 LMGLLGLSE--GL-------GFDNENNVRDVFLEGDCDSGCQK  394 (494)
Q Consensus       361 ~a~l~~~~~--g~-------~~~~~~~~~dl~i~g~~~~~~~~  394 (494)
                      .-.++..+.  +.       ..+.-|+.+++-|..++++++++
T Consensus       262 g~r~i~~a~~~k~pi~IvNIGpTRaD~~a~lKl~~r~gdvl~~  304 (305)
T KOG2683|consen  262 GFRFIRHAHEKKKPIAIVNIGPTRADDMATLKLNYRIGEVLKE  304 (305)
T ss_pred             HHHHHHHHHhhcCcEEEEecCCcchhheeeeeecchHhhhhhc
Confidence            333333321  11       44555677788888888777654

>KOG1905|consensus

Probab=99.82  E-value=3.5e-21  Score=188.13  Aligned_cols=169  Identities=18%  Similarity=0.170  Sum_probs=130.2

Q ss_pred             ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhc-c---CCCC
Q psy11832        231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNL-L---GRMG  305 (494)
Q Consensus       231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~-~---~~~~  305 (494)
                      .+.|+.+|.-. +|.+.|.++.||||||||||.+.|+|.+++.|+|||++-..|.+|+.+|-.+..-+.+- .   ....
T Consensus        98 ~ArPt~THmai~~Lhr~gll~~viSQNvDGLhlrsGlPr~~LsElHGNmfiEvC~sC~~~yvr~~~v~t~gl~at~R~ct  177 (353)
T KOG1905|consen   98 EARPTVTHMAIVALHRAGLLKHVISQNVDGLHLRSGLPREKLSELHGNMFIEVCKSCRPEYVRDRVVDTVGLKATGRHCT  177 (353)
T ss_pred             hcCCcchHHHHHHHHHcchhhhhhhccccchhhccCCCHHHHHHHhcchHHHHhhhhcccceehhheeeccccccccccc
Confidence            45678887655 79999999999999999999999999999999999999999999999987665443321 1   1111


Q ss_pred             CCccCCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhccc---CCC------CCC
Q psy11832        306 ITLGLHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLS---EGL------GFD  374 (494)
Q Consensus       306 ~p~c~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~---~g~------~~~  374 (494)
                      .-.|..|+.|.+.+++.+.=  ..+|...+..+.....++|++|++||||+|   -|.-.++-..   .|.      .++
T Consensus       178 ~~k~~~~rscrg~l~d~~ldwe~~lpln~l~~a~~a~~~Ad~~lcLGTSLqI---~p~g~lpl~~~k~g~K~~ivNlQ~T  254 (353)
T KOG1905|consen  178 GRKCRKCRSCRGTLRDFGLDWEDELPLNDLDRATKAAKRADLILCLGTSLQI---LPKGNLPLKMKKRGGKIVIVNLQWT  254 (353)
T ss_pred             ccccccccccccchhhccccccccCCchhhHHHHHHhhhcceEEEeccceEe---eeCCCcchhHhccCceEEEEeCccC
Confidence            22345566653334433222  468888899999999999999999999999   5555554322   222      678


Q ss_pred             CCCCcccEEEeCChhHHHHHHHHHhCCC
Q psy11832        375 NENNVRDVFLEGDCDSGCQKLADMLGWG  402 (494)
Q Consensus       375 ~~~~~~dl~i~g~~~~~~~~L~~~lg~~  402 (494)
                      ..|..+++.|+|+++.++.+|++.||.+
T Consensus       255 ~hDk~A~l~Ihg~vd~Vm~~lm~~Lgve  282 (353)
T KOG1905|consen  255 PHDKIANLKIHGKVDLVMASLMELLGVE  282 (353)
T ss_pred             cccchhheeehhhHHHHHHHHHHHhCCC
Confidence            8889999999999999999999999854

>cd01406 SIR2-like Sir2-like: Prokaryotic group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines; and are members of the SIR2 superfamily of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation

Probab=97.85  E-value=0.00015  Score=71.57  Aligned_cols=118  Identities=17%  Similarity=0.170  Sum_probs=72.3

Q ss_pred             CCCCCChhHHHHHHHHhcCC-ccEEEeccccchHHhcC--------------------CCCCCEEEecCCcCccccCCCC
Q psy11832         85 GSFKPTPCHYFLKLLHQKNL-LLRHFTQNIDNLERIAG--------------------LPDDKLVEAHGSFHTSHCLTCR  143 (494)
Q Consensus        85 ~~~~Pn~~H~~La~L~~~~~-~~~iiTQNIDgLh~kAG--------------------~~~~~v~elHG~~~~~~C~~C~  143 (494)
                      ...+|++.|.+|++|...+. ...|||+|.|.|.++|=                    .....|+.+||++....-.   
T Consensus        76 ~~~~~~~~h~~i~~l~~~~~~~~~iiTTNyD~llE~a~~~~~~~~~~~~~~~~~~~~~~~~~~i~klHG~~~~~~~~---  152 (242)
T cd01406          76 PDFEPSPLHELLLRLFINNEGDVIIITTNYDRLLETALKEINKVVKVIVSVQLALSASARFNGVYKIHGDVDDDESI---  152 (242)
T ss_pred             CCCCCCHHHHHHHhchhccCCceEEEEcchHHHHHHHHHHcCCCCCcccCccccccccCCCceEEEEecccCCCCce---
Confidence            45789999999999977543 56899999999999871                    1134677788877543211   


Q ss_pred             cccchHHHHHHHhhcCCCCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhc--
Q psy11832        144 KDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVD--  221 (494)
Q Consensus       144 ~~~~~~~~~~~i~~~~~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~--  221 (494)
                       ..+.+...+...                         ....+....+.+-..-.+|+||.|+.=..+..+.......  
T Consensus       153 -VlT~~dY~~~~~-------------------------~~~~~~~~l~~ll~~~~~LFiG~S~~D~~i~~ll~~~~~~~~  206 (242)
T cd01406         153 -VLTKSDYERYYL-------------------------KNGWATKFLKSDLEKYTVLFIGYSLTDPNIRYLLERLRKNYE  206 (242)
T ss_pred             -EecHHHHHHHHh-------------------------ccHHHHHHHHHHHhcCcEEEEEcCCCCCcHHHHHHHHHHHhc
Confidence             111111111000                         0012223333333467899999999999999988876433  


Q ss_pred             -CCCceEEEEe
Q psy11832        222 -FPKADLLLIM  231 (494)
Q Consensus       222 -~~~a~lv~IN  231 (494)
                       ..+.+++++.
T Consensus       207 ~~~~~hy~~~~  217 (242)
T cd01406         207 GKHASHFALLQ  217 (242)
T ss_pred             cCCCceEEEEe
Confidence             3344455543

>PF13289 SIR2_2: SIR2-like domain

Probab=93.10  E-value=0.3  Score=43.23  Aligned_cols=50  Identities=14%  Similarity=0.129  Sum_probs=29.4

Q ss_pred             HHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCC--ceEEEEecccc
Q psy11832        186 FHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK--ADLLLIMGTSL  235 (494)
Q Consensus       186 ~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~--a~lv~IN~~p~  235 (494)
                      +..+.+.+-.+..+|+||.|+.=.....+.+.+....+.  .+.+.+...+.
T Consensus        76 ~~~~l~~~l~~~~~lfiGys~~D~~i~~~l~~~~~~~~~~~~~~~~v~~~~~  127 (143)
T PF13289_consen   76 FPNFLRSLLRSKTLLFIGYSFNDPDIRQLLRSALENSGKSRPRHYIVIPDPD  127 (143)
T ss_pred             HHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHhccCCCccEEEEEcCCc
Confidence            333444444677888889999877777777666332332  23444444443

>PF00205 TPP_enzyme_M: Thiamine pyrophosphate enzyme, central domain; InterPro: IPR012000 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor

Probab=85.58  E-value=1.1  Score=39.80  Aligned_cols=49  Identities=20%  Similarity=0.232  Sum_probs=35.2

Q ss_pred             HHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccc
Q psy11832        187 HRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQ  238 (494)
Q Consensus       187 ~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h  238 (494)
                      ..+.+.+++||++|++||++.-.........+   .|..++|.|+.+|....
T Consensus        69 ~~~~~~l~~aDlvl~iG~~~~~~~~~~~~~~~---~~~~~~I~I~~d~~~~~  117 (137)
T PF00205_consen   69 PAANEALEQADLVLAIGTRLSDFNTYGFSPAF---NPDAKIIQIDPDPAEIG  117 (137)
T ss_dssp             HHHHHHHHHSSEEEEESSSSSTTTTTTTTGCS---TTTSEEEEEESSGGGTT
T ss_pred             HHHHHHhcCCCEEEEECCCCcccccccccccc---CCCCEEEEEECCHHHhC
Confidence            45667779999999999998765555432222   34558999998887753

It has been shown [] that some of these enzymes are structurally related. This central domain of TPP enzymes contains a 2-fold Rossman fold. ; GO: 0000287 magnesium ion binding, 0030976 thiamine pyrophosphate binding; PDB: 1OZH_C 1OZF_B 1OZG_B 2Q29_B 2Q28_A 2Q27_B 1OVM_B 1PVD_A 1PYD_B 2VK1_C ....

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=84.25  E-value=0.31  Score=34.15  Aligned_cols=34  Identities=26%  Similarity=0.587  Sum_probs=22.6

Q ss_pred             CccccCCCCcccchHHHHHHHhhcCCCCCCCCCCeee
Q psy11832        135 HTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVK  171 (494)
Q Consensus       135 ~~~~C~~C~~~~~~~~~~~~i~~~~~P~C~~Cgg~lr  171 (494)
                      ...+|..|++.+.....   +.....+.||.||+.++
T Consensus         4 Y~y~C~~Cg~~fe~~~~---~~~~~~~~CP~Cg~~~~   37 (41)
T smart00834        4 YEYRCEDCGHTFEVLQK---ISDDPLATCPECGGDVR   37 (41)
T ss_pred             EEEEcCCCCCEEEEEEe---cCCCCCCCCCCCCCcce
Confidence            45689999997753211   11145678999998654

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria

Probab=81.28  E-value=0.41  Score=34.27  Aligned_cols=35  Identities=20%  Similarity=0.467  Sum_probs=22.9

Q ss_pred             cCccccCCCCcccchHHHHHHHhhcCCCCCCCCCC-eee
Q psy11832        134 FHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNG-LVK  171 (494)
Q Consensus       134 ~~~~~C~~C~~~~~~~~~~~~i~~~~~P~C~~Cgg-~lr  171 (494)
                      ++..+|..|++.+....   .+.......||.||+ .++
T Consensus         3 ~Yey~C~~Cg~~fe~~~---~~~~~~~~~CP~Cg~~~~~   38 (42)
T PF09723_consen    3 IYEYRCEECGHEFEVLQ---SISEDDPVPCPECGSTEVR   38 (42)
T ss_pred             CEEEEeCCCCCEEEEEE---EcCCCCCCcCCCCCCCceE
Confidence            35678999998764321   122245778999998 443

The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB []. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>PF07295 DUF1451: Protein of unknown function (DUF1451); InterPro: IPR009912 This family consists of several hypothetical bacterial proteins of around 160 residues in length

Probab=80.97  E-value=0.82  Score=41.92  Aligned_cols=30  Identities=27%  Similarity=0.586  Sum_probs=22.4

Q ss_pred             cCccccCCCCcccchHHHHHHHhhcCCCCCCCCCCe
Q psy11832        134 FHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGL  169 (494)
Q Consensus       134 ~~~~~C~~C~~~~~~~~~~~~i~~~~~P~C~~Cgg~  169 (494)
                      ...++|.+|++......      ...+|.||+||+.
T Consensus       110 ~G~l~C~~Cg~~~~~~~------~~~l~~Cp~C~~~  139 (146)
T PF07295_consen  110 PGTLVCENCGHEVELTH------PERLPPCPKCGHT  139 (146)
T ss_pred             CceEecccCCCEEEecC------CCcCCCCCCCCCC
Confidence            45789999999754331      2468999999974

Members of this family contain four highly conserved cysteine resides toward the C-terminal region of the protein. The function of this family is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	494
1j8f_A	323	Human Sirt2 Histone Deacetylase Length = 323		3e-64
1j8f_A	323	Human Sirt2 Histone Deacetylase Length = 323		7e-18
1j8f_C	323	Human Sirt2 Histone Deacetylase Length = 323		3e-64
1j8f_C	323	Human Sirt2 Histone Deacetylase Length = 323		8e-18
3glr_A	285	Crystal Structure Of Human Sirt3 With Acetyl-Lysine		1e-51
3glr_A	285	Crystal Structure Of Human Sirt3 With Acetyl-Lysine		3e-07
4fvt_A	274	Human Sirt3 Bound To Ac-Acs Peptide And Carba-Nad L		1e-51
4fvt_A	274	Human Sirt3 Bound To Ac-Acs Peptide And Carba-Nad L		2e-07
4hd8_A	284	Crystal Structure Of Human Sirt3 In Complex With Fl		1e-51
4hd8_A	284	Crystal Structure Of Human Sirt3 In Complex With Fl		3e-07
1q14_A	361	Structure And Autoregulation Of The Yeast Hst2 Homo		6e-38
1q14_A	361	Structure And Autoregulation Of The Yeast Hst2 Homo		7e-06
2od7_A	308	Crystal Structure Of Yhst2 Bound To The Intermediat		2e-37
2od7_A	308	Crystal Structure Of Yhst2 Bound To The Intermediat		4e-06
1szc_A	297	Structural Basis For Nicotinamide Cleavage And Adp-		2e-37
1szc_A	297	Structural Basis For Nicotinamide Cleavage And Adp-		4e-06
1q17_A	300	Structure Of The Yeast Hst2 Protein Deacetylase In		2e-37
1q17_A	300	Structure Of The Yeast Hst2 Protein Deacetylase In		4e-06
1q1a_A	289	Structure Of The Yeast Hst2 Protein Deacetylase In		3e-37
1q1a_A	289	Structure Of The Yeast Hst2 Protein Deacetylase In		4e-06
2od2_A	308	Crystal Structure Of Yhst2 I117f Mutant Bound To Ca		6e-37
2od2_A	308	Crystal Structure Of Yhst2 I117f Mutant Bound To Ca		1e-05
4i5i_A	287	Crystal Structure Of The Sirt1 Catalytic Domain Bou		1e-31
4iao_A	492	Crystal Structure Of Sir2 C543s Mutant In Complex W		7e-24
4iao_A	492	Crystal Structure Of Sir2 C543s Mutant In Complex W		7e-06
2hjh_A	354	Crystal Structure Of The Sir2 Deacetylase Length =		9e-24
2hjh_A	354	Crystal Structure Of The Sir2 Deacetylase Length =		2e-05
1yc5_A	246	Sir2-P53 Peptide-Nicotinamide Length = 246		1e-22
2h4h_A	246	Sir2 H116y Mutant-P53 Peptide-Nad Length = 246		5e-22
2h59_A	246	Sir2 H116a-Deacetylated P53 Peptide-3'-O-Acetyl Adp		1e-21
1ma3_A	253	Structure Of A Sir2 Enzyme Bound To An Acetylated P		2e-13
1m2j_A	249	Sir2 Homologue H80n Mutant-Adp Ribose Complex Lengt		3e-13
1m2h_A	249	Sir2 Homologue S24a Mutant-adp Ribose Complex Lengt		3e-13
1m2g_A	249	Sir2 Homologue-Adp Ribose Complex Length = 249		3e-13
1ici_A	256	Crystal Structure Of A Sir2 Homolog-Nad Complex Len		3e-13
1m2k_A	249	Sir2 Homologue F159a Mutant-Adp Ribose Complex Leng		2e-12
1m2n_A	249	Sir2 Homologues (D102gF159AR170A) MUTANT-2'-O-Acety		2e-11
2b4y_A	271	Crystal Structure Of Human Sirtuin Homolog 5 Length		3e-11
4g1c_A	267	Human Sirt5 Bound To Succ-Idh2 And Carba-Nad Length		5e-11
2nyr_A	271	Crystal Structure Of Human Sirtuin Homolog 5 In Com		5e-11
3rig_A	273	Sirt5 Is An Nad-Dependent Protein Lysine Demalonyla		5e-11
4hda_A	275	Crystal Structure Of Human Sirt5 In Complex With Fl		5e-11
3u31_A	290	Plasmodium Falciparum Sir2a Preferentially Hydrolyz		4e-10
3jwp_A	265	Crystal Structure Of Plasmodium Falciparum Sir2a (P		3e-09
3k35_A	318	Crystal Structure Of Human Sirt6 Length = 318		1e-07
3pki_A	355	Human Sirt6 Crystal Structure In Complex With Adp R		3e-07

>pdb|1J8F|A Chain A, Human Sirt2 Histone Deacetylase Length = 323

Iteration: 1
 Score =  242 bits (618), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 121/223 (54%), Positives = 145/223 (65%), Gaps = 32/223 (14%)
Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSP +GLYDNLEKY LP+P AIFE+ YFK  PE F+ LAKELYPG FK     
Sbjct: 57  SAGIPDFRSPSTGLYDNLEKYHLPYPEAIFEISYFKKHPEPFFALAKELYPGQFK----- 111
Query: 64  YFXXXXXXXXXXXRHFTQVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLP 123
                                    PT CHYF           R +TQNID LERIAGL 
Sbjct: 112 -------------------------PTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLE 146
Query: 124 DDKLVEAHGSFHTSHCLT--CRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENL 181
            + LVEAHG+F+TSHC++  CR +Y ++WMKE+IF+EV P CE C  LVKPDIVFFGE+L
Sbjct: 147 QEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSEVTPKCEDCQSLVKPDIVFFGESL 206
Query: 182 PSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK 224
           P+R+F  +  DF K DLLL+MGTSL VQPF SL+ K  +  P+
Sbjct: 207 PARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISKAPLSTPR 249

>pdb|1J8F|A Chain A, Human Sirt2 Histone Deacetylase Length = 323

Iteration: 1
 Score = 88.6 bits (218), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 89/188 (47%), Gaps = 34/188 (18%)
Query: 243 LVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCL--TCRKDYSVAWMKE--- 297
           L DK  +    + NID LERIAGL  + LVEAHG+F+TSHC+  +CR +Y ++WMKE   
Sbjct: 122 LKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIF 181
Query: 298 GNLLGRMGITLGLHAGGL----SSIPGGAEVFSALCLE--------------------FG 333
             +  +      L    +     S+P  A  FS  C++                    F 
Sbjct: 182 SEVTPKCEDCQSLVKPDIVFFGESLP--ARFFS--CMQSDFLKVDLLLVMGTSLQVQPFA 237
Query: 334 VHSASAPPHCPRLLINKEKVGVGSRNPXXXXXXXXXXXXFDNENNVRDVFLEGDCDSGCQ 393
              + AP   PRLLINKEK G  S               FD++   RDV   G+CD GC 
Sbjct: 238 SLISKAPLSTPRLLINKEKAG-QSDPFLGMIMGLGGGMDFDSKKAYRDVAWLGECDQGCL 296
Query: 394 KLADMLGW 401
            LA++LGW
Sbjct: 297 ALAELLGW 304

>pdb|1J8F|C Chain C, Human Sirt2 Histone Deacetylase Length = 323

Iteration: 1
 Score =  242 bits (617), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 121/223 (54%), Positives = 145/223 (65%), Gaps = 32/223 (14%)
Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSP +GLYDNLEKY LP+P AIFE+ YFK  PE F+ LAKELYPG FK     
Sbjct: 57  SAGIPDFRSPSTGLYDNLEKYHLPYPEAIFEISYFKKHPEPFFALAKELYPGQFK----- 111
Query: 64  YFXXXXXXXXXXXRHFTQVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLP 123
                                    PT CHYF           R +TQNID LERIAGL 
Sbjct: 112 -------------------------PTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLE 146
Query: 124 DDKLVEAHGSFHTSHCLT--CRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENL 181
            + LVEAHG+F+TSHC++  CR +Y ++WMKE+IF+EV P CE C  LVKPDIVFFGE+L
Sbjct: 147 QEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSEVTPKCEDCQSLVKPDIVFFGESL 206
Query: 182 PSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK 224
           P+R+F  +  DF K DLLL+MGTSL VQPF SL+ K  +  P+
Sbjct: 207 PARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISKAPLSTPR 249

>pdb|1J8F|C Chain C, Human Sirt2 Histone Deacetylase Length = 323

Iteration: 1
 Score = 88.6 bits (218), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 90/194 (46%), Gaps = 46/194 (23%)
Query: 243 LVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCL--TCRKDYSVAWMKEG-- 298
           L DK  +    + NID LERIAGL  + LVEAHG+F+TSHC+  +CR +Y ++WMKE   
Sbjct: 122 LKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIF 181
Query: 299 -----------NLLGRMGITLGLHAGGLSSIPGGAEVFSALCLE---------------- 331
                      +L+    +  G       S+P  A  FS  C++                
Sbjct: 182 SEVTPKCEDCQSLVKPDIVFFG------ESLP--ARFFS--CMQSDFLKVDLLLVMGTSL 231
Query: 332 ----FGVHSASAPPHCPRLLINKEKVGVGSRNPXXXXXXXXXXXXFDNENNVRDVFLEGD 387
               F    + AP   PRLLINKEK G  S               FD++   RDV   G+
Sbjct: 232 QVQPFASLISKAPLSTPRLLINKEKAG-QSDPFLGMIMGLGGGMDFDSKKAYRDVAWLGE 290
Query: 388 CDSGCQKLADMLGW 401
           CD GC  LA++LGW
Sbjct: 291 CDQGCLALAELLGW 304

>pdb|3GLR|A Chain A, Crystal Structure Of Human Sirt3 With Acetyl-Lysine Acecs2 Peptide Length = 285

Iteration: 1
 Score =  200 bits (509), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 103/220 (46%), Positives = 133/220 (60%), Gaps = 31/220 (14%)
Query: 5   AGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHY 64
           +GIPDFRSPGSGLY NL++Y LP+P AIFEL +F H P+ F+TLAKELYPG++K      
Sbjct: 38  SGIPDFRSPGSGLYSNLQQYDLPYPEAIFELPFFFHNPKPFFTLAKELYPGNYK------ 91
Query: 65  FXXXXXXXXXXXRHFTQVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLPD 124
                                   P   HYF           R +TQNID LER++G+P 
Sbjct: 92  ------------------------PNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPA 127
Query: 125 DKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSR 184
            KLVEAHG+F ++ C  C++ +    ++  + A+ +P C  C G+VKPDIVFFGE LP R
Sbjct: 128 SKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCPVCTGVVKPDIVFFGEPLPQR 187
Query: 185 YFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK 224
           +   V VDFP ADLLLI+GTSL V+PF SL + V    P+
Sbjct: 188 FLLHV-VDFPMADLLLILGTSLEVEPFASLTEAVRSSVPR 226

>pdb|3GLR|A Chain A, Crystal Structure Of Human Sirt3 With Acetyl-Lysine Acecs2 Peptide Length = 285

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 39/170 (22%)
Query: 254 SDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRM-------GI 306
           + NID LER++G+P  KLVEAHG+F ++ C  C++ +    ++   +  R+       G+
Sbjct: 113 TQNIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCPVCTGV 172
Query: 307 T--------------LGLHAGGLSSIPGGAEVFSALCLE-FGVHSASAPPHCPRLLINKE 351
                            LH            + ++L +E F   + +     PRLLIN++
Sbjct: 173 VKPDIVFFGEPLPQRFLLHVVDFPMADLLLILGTSLEVEPFASLTEAVRSSVPRLLINRD 232
Query: 352 KVGVGSRNPXXXXXXXXXXXXFDNENNVRDVFLEGDCDSGCQKLADMLGW 401
            VG  + +P                   RDV   GD   G + L ++LGW
Sbjct: 233 LVGPLAWHPRS-----------------RDVAQLGDVVHGVESLVELLGW 265

>pdb|4FVT|A Chain A, Human Sirt3 Bound To Ac-Acs Peptide And Carba-Nad Length = 274

Iteration: 1
 Score =  200 bits (509), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 103/220 (46%), Positives = 133/220 (60%), Gaps = 31/220 (14%)
Query: 5   AGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHY 64
           +GIPDFRSPGSGLY NL++Y LP+P AIFEL +F H P+ F+TLAKELYPG++K      
Sbjct: 31  SGIPDFRSPGSGLYSNLQQYDLPYPEAIFELPFFFHNPKPFFTLAKELYPGNYK------ 84
Query: 65  FXXXXXXXXXXXRHFTQVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLPD 124
                                   P   HYF           R +TQNID LER++G+P 
Sbjct: 85  ------------------------PNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPA 120
Query: 125 DKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSR 184
            KLVEAHG+F ++ C  C++ +    ++  + A+ +P C  C G+VKPDIVFFGE LP R
Sbjct: 121 SKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCPVCTGVVKPDIVFFGEPLPQR 180
Query: 185 YFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK 224
           +   V VDFP ADLLLI+GTSL V+PF SL + V    P+
Sbjct: 181 FLLHV-VDFPMADLLLILGTSLEVEPFASLTEAVRSSVPR 219

>pdb|4FVT|A Chain A, Human Sirt3 Bound To Ac-Acs Peptide And Carba-Nad Length = 274

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 39/170 (22%)
Query: 254 SDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRM-------GI 306
           + NID LER++G+P  KLVEAHG+F ++ C  C++ +    ++   +  R+       G+
Sbjct: 106 TQNIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCPVCTGV 165
Query: 307 T--------------LGLHAGGLSSIPGGAEVFSALCLE-FGVHSASAPPHCPRLLINKE 351
                            LH            + ++L +E F   + +     PRLLIN++
Sbjct: 166 VKPDIVFFGEPLPQRFLLHVVDFPMADLLLILGTSLEVEPFASLTEAVRSSVPRLLINRD 225
Query: 352 KVGVGSRNPXXXXXXXXXXXXFDNENNVRDVFLEGDCDSGCQKLADMLGW 401
            VG  + +P                   RDV   GD   G + L ++LGW
Sbjct: 226 LVGPLAWHPRS-----------------RDVAQLGDVVHGVESLVELLGW 258

>pdb|4HD8|A Chain A, Crystal Structure Of Human Sirt3 In Complex With Fluor-de-lys Peptide And Piceatannol Length = 284

Iteration: 1
 Score =  200 bits (509), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 103/220 (46%), Positives = 133/220 (60%), Gaps = 31/220 (14%)
Query: 5   AGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHY 64
           +GIPDFRSPGSGLY NL++Y LP+P AIFEL +F H P+ F+TLAKELYPG++K      
Sbjct: 37  SGIPDFRSPGSGLYSNLQQYDLPYPEAIFELPFFFHNPKPFFTLAKELYPGNYK------ 90
Query: 65  FXXXXXXXXXXXRHFTQVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLPD 124
                                   P   HYF           R +TQNID LER++G+P 
Sbjct: 91  ------------------------PNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPA 126
Query: 125 DKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSR 184
            KLVEAHG+F ++ C  C++ +    ++  + A+ +P C  C G+VKPDIVFFGE LP R
Sbjct: 127 SKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCPVCTGVVKPDIVFFGEPLPQR 186
Query: 185 YFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK 224
           +   V VDFP ADLLLI+GTSL V+PF SL + V    P+
Sbjct: 187 FLLHV-VDFPMADLLLILGTSLEVEPFASLTEAVRSSVPR 225

>pdb|4HD8|A Chain A, Crystal Structure Of Human Sirt3 In Complex With Fluor-de-lys Peptide And Piceatannol Length = 284

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 39/170 (22%)
Query: 254 SDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRM-------GI 306
           + NID LER++G+P  KLVEAHG+F ++ C  C++ +    ++   +  R+       G+
Sbjct: 112 TQNIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCPVCTGV 171
Query: 307 T--------------LGLHAGGLSSIPGGAEVFSALCLE-FGVHSASAPPHCPRLLINKE 351
                            LH            + ++L +E F   + +     PRLLIN++
Sbjct: 172 VKPDIVFFGEPLPQRFLLHVVDFPMADLLLILGTSLEVEPFASLTEAVRSSVPRLLINRD 231
Query: 352 KVGVGSRNPXXXXXXXXXXXXFDNENNVRDVFLEGDCDSGCQKLADMLGW 401
            VG  + +P                   RDV   GD   G + L ++LGW
Sbjct: 232 LVGPLAWHP-----------------RSRDVAQLGDVVHGVESLVELLGW 264

>pdb|1Q14|A Chain A, Structure And Autoregulation Of The Yeast Hst2 Homolog Of Sir2 Length = 361

Iteration: 1
 Score =  155 bits (391), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 89/229 (38%), Positives = 118/229 (51%), Gaps = 46/229 (20%)
Query: 6   GIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYF 65
           GIPDFRSPG+GLY NL + KLP+P A+F++D+F+  P  FYTLAKELYPG+F+       
Sbjct: 44  GIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYTLAKELYPGNFR------- 96
Query: 66  XXXXXXXXXXXRHFTQVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLPDD 125
                                  P+  HY            R +TQNID LER AG+ DD
Sbjct: 97  -----------------------PSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVKDD 133
Query: 126 KLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIP---TCEKCNGLVKPDIVFFGENLP 182
            ++EAHGSF   HC+ C K Y     K ++    I     C+ C  LVKP IVFFGE+LP
Sbjct: 134 LIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELVKPAIVFFGEDLP 193
Query: 183 SRYFH-------------RVDVDFPKADLLLIMGTSLVVQPFCSLVDKV 218
             +                     P+  L++++GTSL V PF SL +++
Sbjct: 194 DSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASLPEEI 242

>pdb|1Q14|A Chain A, Structure And Autoregulation Of The Yeast Hst2 Homolog Of Sir2 Length = 361

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 245 DKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDY 290
           DK  ++   + NID LER AG+ DD ++EAHGSF   HC+ C K Y
Sbjct: 109 DKDVLKRVYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVY 154

>pdb|2OD7|A Chain A, Crystal Structure Of Yhst2 Bound To The Intermediate Analogue Adp-Hpd, And And Aceylated H4 Peptide Length = 308

Iteration: 1
 Score =  154 bits (388), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/229 (38%), Positives = 118/229 (51%), Gaps = 46/229 (20%)
Query: 6   GIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYF 65
           GIPDFRSPG+GLY NL + KLP+P A+F++D+F+  P  FYTLAKELYPG+F+       
Sbjct: 54  GIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYTLAKELYPGNFR------- 106
Query: 66  XXXXXXXXXXXRHFTQVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLPDD 125
                                  P+  HY            R +TQNID LER AG+ DD
Sbjct: 107 -----------------------PSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVKDD 143
Query: 126 KLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIP---TCEKCNGLVKPDIVFFGENLP 182
            ++EAHGSF   HC+ C K Y     K ++    I     C+ C  LVKP IVFFGE+LP
Sbjct: 144 LIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELVKPAIVFFGEDLP 203
Query: 183 SRYFH-------------RVDVDFPKADLLLIMGTSLVVQPFCSLVDKV 218
             +                     P+  L++++GTSL V PF SL +++
Sbjct: 204 DSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASLPEEI 252

>pdb|2OD7|A Chain A, Crystal Structure Of Yhst2 Bound To The Intermediate Analogue Adp-Hpd, And And Aceylated H4 Peptide Length = 308

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 245 DKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDY 290
           DK  ++   + NID LER AG+ DD ++EAHGSF   HC+ C K Y
Sbjct: 119 DKDVLKRVYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVY 164

>pdb|1SZC|A Chain A, Structural Basis For Nicotinamide Cleavage And Adp-Ribose Transfer By Nad+-Dependent Sir2 HistonePROTEIN DEACETYLASES Length = 297

Iteration: 1
 Score =  153 bits (387), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/229 (38%), Positives = 118/229 (51%), Gaps = 46/229 (20%)
Query: 6   GIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYF 65
           GIPDFRSPG+GLY NL + KLP+P A+F++D+F+  P  FYTLAKELYPG+F+       
Sbjct: 43  GIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYTLAKELYPGNFR------- 95
Query: 66  XXXXXXXXXXXRHFTQVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLPDD 125
                                  P+  HY            R +TQNID LER AG+ DD
Sbjct: 96  -----------------------PSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVKDD 132
Query: 126 KLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIP---TCEKCNGLVKPDIVFFGENLP 182
            ++EAHGSF   HC+ C K Y     K ++    I     C+ C  LVKP IVFFGE+LP
Sbjct: 133 LIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELVKPAIVFFGEDLP 192
Query: 183 SRYFH-------------RVDVDFPKADLLLIMGTSLVVQPFCSLVDKV 218
             +                     P+  L++++GTSL V PF SL +++
Sbjct: 193 DSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASLPEEI 241

>pdb|1SZC|A Chain A, Structural Basis For Nicotinamide Cleavage And Adp-Ribose Transfer By Nad+-Dependent Sir2 HistonePROTEIN DEACETYLASES Length = 297

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 245 DKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDY 290
           DK  ++   + NID LER AG+ DD ++EAHGSF   HC+ C K Y
Sbjct: 108 DKDVLKRVYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVY 153

>pdb|1Q17|A Chain A, Structure Of The Yeast Hst2 Protein Deacetylase In Ternary Complex With 2'-O-Acetyl Adp Ribose And Histone Peptide Length = 300

Iteration: 1
 Score =  153 bits (387), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/231 (38%), Positives = 119/231 (51%), Gaps = 46/231 (19%)
Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           + GIPDFRSPG+GLY NL + KLP+P A+F++D+F+  P  FYTLAKELYPG+F+     
Sbjct: 44  SCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYTLAKELYPGNFR----- 98
Query: 64  YFXXXXXXXXXXXRHFTQVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLP 123
                                    P+  HY            R +TQNID LER AG+ 
Sbjct: 99  -------------------------PSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVK 133
Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIP---TCEKCNGLVKPDIVFFGEN 180
           DD ++EAHGSF   HC+ C K Y     K ++    I     C+ C  LVKP IVFFGE+
Sbjct: 134 DDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELVKPAIVFFGED 193
Query: 181 LPSRYFH-------------RVDVDFPKADLLLIMGTSLVVQPFCSLVDKV 218
           LP  +                     P+  L++++GTSL V PF SL +++
Sbjct: 194 LPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASLPEEI 244

>pdb|1Q17|A Chain A, Structure Of The Yeast Hst2 Protein Deacetylase In Ternary Complex With 2'-O-Acetyl Adp Ribose And Histone Peptide Length = 300

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 245 DKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDY 290
           DK  ++   + NID LER AG+ DD ++EAHGSF   HC+ C K Y
Sbjct: 111 DKDVLKRVYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVY 156

>pdb|1Q1A|A Chain A, Structure Of The Yeast Hst2 Protein Deacetylase In Ternary Complex With 2'-O-Acetyl Adp Ribose And Histone Peptide Length = 289

Iteration: 1
 Score =  153 bits (386), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/231 (38%), Positives = 119/231 (51%), Gaps = 46/231 (19%)
Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           + GIPDFRSPG+GLY NL + KLP+P A+F++D+F+  P  FYTLAKELYPG+F+     
Sbjct: 34  SCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYTLAKELYPGNFR----- 88
Query: 64  YFXXXXXXXXXXXRHFTQVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLP 123
                                    P+  HY            R +TQNID LER AG+ 
Sbjct: 89  -------------------------PSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVK 123
Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIP---TCEKCNGLVKPDIVFFGEN 180
           DD ++EAHGSF   HC+ C K Y     K ++    I     C+ C  LVKP IVFFGE+
Sbjct: 124 DDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELVKPAIVFFGED 183
Query: 181 LPSRYFH-------------RVDVDFPKADLLLIMGTSLVVQPFCSLVDKV 218
           LP  +                     P+  L++++GTSL V PF SL +++
Sbjct: 184 LPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASLPEEI 234

>pdb|1Q1A|A Chain A, Structure Of The Yeast Hst2 Protein Deacetylase In Ternary Complex With 2'-O-Acetyl Adp Ribose And Histone Peptide Length = 289

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 245 DKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDY 290
           DK  ++   + NID LER AG+ DD ++EAHGSF   HC+ C K Y
Sbjct: 101 DKDVLKRVYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVY 146

>pdb|2OD2|A Chain A, Crystal Structure Of Yhst2 I117f Mutant Bound To Carba-Nad+ And An Acetylated H4 Peptide Length = 308

Iteration: 1
 Score =  151 bits (382), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 88/229 (38%), Positives = 117/229 (51%), Gaps = 46/229 (20%)
Query: 6   GIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYF 65
           GIPDFRSPG+GLY NL + KLP+P A+F++D+F+  P  FYTLAKELYPG+F+       
Sbjct: 54  GIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYTLAKELYPGNFR------- 106
Query: 66  XXXXXXXXXXXRHFTQVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLPDD 125
                                  P+  HY            R +TQN D LER AG+ DD
Sbjct: 107 -----------------------PSKFHYLLKLFQDKDVLKRVYTQNFDTLERQAGVKDD 143
Query: 126 KLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIP---TCEKCNGLVKPDIVFFGENLP 182
            ++EAHGSF   HC+ C K Y     K ++    I     C+ C  LVKP IVFFGE+LP
Sbjct: 144 LIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELVKPAIVFFGEDLP 203
Query: 183 SRYFH-------------RVDVDFPKADLLLIMGTSLVVQPFCSLVDKV 218
             +                     P+  L++++GTSL V PF SL +++
Sbjct: 204 DSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASLPEEI 252

>pdb|2OD2|A Chain A, Crystal Structure Of Yhst2 I117f Mutant Bound To Carba-Nad+ And An Acetylated H4 Peptide Length = 308

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 245 DKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDY 290
           DK  ++   + N D LER AG+ DD ++EAHGSF   HC+ C K Y
Sbjct: 119 DKDVLKRVYTQNFDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVY 164

>pdb|4I5I|A Chain A, Crystal Structure Of The Sirt1 Catalytic Domain Bound To Nad And An Ex527 Analog Length = 287

Iteration: 1
 Score =  134 bits (337), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 119/228 (52%), Gaps = 40/228 (17%)
Query: 4   AAGIPDFRSPGSGLYDNL--EKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTP 61
           + GIPDFRS   G+Y  L  +   LP P A+F+++YF+  P  F+  AKE+YPG F    
Sbjct: 30  SCGIPDFRS-RDGIYARLAVDFPDLPDPQAMFDIEYFRKDPRPFFKFAKEIYPGQF---- 84
Query: 62  CHYFXXXXXXXXXXXRHFTQVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAG 121
                                     +P+ CH F           R++TQNID LE++AG
Sbjct: 85  --------------------------QPSLCHKFIALSDKEGKLLRNYTQNIDTLEQVAG 118
Query: 122 LPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNG-----LVKPDIVF 176
           +   ++++ HGSF T+ CL C+       ++  IF +V+P C +C       ++KP+IVF
Sbjct: 119 I--QRIIQCHGSFATASCLICKYKVDCEAVRGDIFNQVVPRCPRCPADEPLAIMKPEIVF 176
Query: 177 FGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK 224
           FGENLP ++   +  D  + DLL+++G+SL V+P   +   +  + P+
Sbjct: 177 FGENLPEQFHRAMKYDKDEVDLLIVIGSSLKVRPVALIPSSIPHEVPQ 224

>pdb|4IAO|A Chain A, Crystal Structure Of Sir2 C543s Mutant In Complex With Sid Domain Of Sir4 Length = 492

Iteration: 1
 Score =  108 bits (270), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 109/261 (41%), Gaps = 74/261 (28%)
Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           + GIPDFRS   G Y  ++   L  P  +F  + F H P  FY +A  + P         
Sbjct: 198 SLGIPDFRS-SEGFYSKIKHLGLDDPQDVFNYNIFMHDPSVFYNIANMVLPPE------- 249
Query: 64  YFXXXXXXXXXXXRHFTQVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLP 123
                            ++Y      +P H F           R++TQNIDNLE  AG+ 
Sbjct: 250 -----------------KIY------SPLHSFIKMLQMKGKLLRNYTQNIDNLESYAGIS 286
Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEV----IPTCEKC------------- 166
            DKLV+ HGSF T+ C+TC  +       ERIF ++    +P C  C             
Sbjct: 287 TDKLVQCHGSFATATCVTCHWNLP----GERIFNKIRNLELPLCPYCYKKRREYFPEGYN 342
Query: 167 ----------------------NGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGT 204
                                  G++KPDI FFGE LP+++   +  D  + DLL+ +GT
Sbjct: 343 NKVGVAASQGSMSERPPYILNSYGVLKPDITFFGEALPNKFHKSIREDILECDLLICIGT 402
Query: 205 SLVVQPFCSLVDKVDVDFPKA 225
           SL V P   +V+ V    P+ 
Sbjct: 403 SLKVAPVSEIVNMVPSHVPQV 423

>pdb|4IAO|A Chain A, Crystal Structure Of Sir2 C543s Mutant In Complex With Sid Domain Of Sir4 Length = 492

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 229 LIMGTSLVVQPFCSLVDKTNIRG----SDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCL 284
           +++    +  P  S +    ++G    + + NIDNLE  AG+  DKLV+ HGSF T+ C+
Sbjct: 244 MVLPPEKIYSPLHSFIKMLQMKGKLLRNYTQNIDNLESYAGISTDKLVQCHGSFATATCV 303
Query: 285 TC 286
           TC
Sbjct: 304 TC 305

>pdb|2HJH|A Chain A, Crystal Structure Of The Sir2 Deacetylase Length = 354

Iteration: 1
 Score =  108 bits (269), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 111/261 (42%), Gaps = 74/261 (28%)
Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           + GIPDFRS   G Y  ++   L  P  +F  + F H P  FY +A  + P         
Sbjct: 60  SLGIPDFRS-SEGFYSKIKHLGLDDPQDVFNYNIFXHDPSVFYNIANXVLPPE------- 111
Query: 64  YFXXXXXXXXXXXRHFTQVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLP 123
                            ++Y      +P H F           R++TQNIDNLE  AG+ 
Sbjct: 112 -----------------KIY------SPLHSFIKXLQXKGKLLRNYTQNIDNLESYAGIS 148
Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEV----IPTCEKC------------- 166
            DKLV+ HGSF T+ C+TC  +       ERIF ++    +P C  C             
Sbjct: 149 TDKLVQCHGSFATATCVTCHWNLP----GERIFNKIRNLELPLCPYCYKKRREYFPEGYN 204
Query: 167 ----------------------NGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGT 204
                                  G++KPDI FFGE LP+++   +  D  + DLL+ +GT
Sbjct: 205 NKVGVAASQGSXSERPPYILNSYGVLKPDITFFGEALPNKFHKSIREDILECDLLICIGT 264
Query: 205 SLVVQPFCSLVDKVDVDFPKA 225
           SL V P   +V+ V    P+ 
Sbjct: 265 SLKVAPVSEIVNXVPSHVPQV 285

>pdb|2HJH|A Chain A, Crystal Structure Of The Sir2 Deacetylase Length = 354

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 236 VVQPFCSLVDKTNIRG----SDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTC 286
           +  P  S +     +G    + + NIDNLE  AG+  DKLV+ HGSF T+ C+TC
Sbjct: 113 IYSPLHSFIKXLQXKGKLLRNYTQNIDNLESYAGISTDKLVQCHGSFATATCVTC 167

>pdb|1YC5|A Chain A, Sir2-P53 Peptide-Nicotinamide Length = 246

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 97/211 (45%), Gaps = 40/211 (18%)
Query: 5   AGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKE-LYPGSFKPTPCH 63
           +GIPDFR P +G+Y         +   +F++D+F   PE FY  AKE ++P         
Sbjct: 28  SGIPDFRGP-NGIYKK-------YSQNVFDIDFFYSHPEEFYRFAKEGIFP--------- 70
Query: 64  YFXXXXXXXXXXXRHFTQVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLP 123
                                   KP   H                TQNID L + AG  
Sbjct: 71  --------------------MLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAG-- 108
Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPS 183
             K++E HG+    +C+ C K Y+V  + +++ +  +P C+ CN L++P+IVFFGENLP 
Sbjct: 109 SKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDVPLCDDCNSLIRPNIVFFGENLPQ 168
Query: 184 RYFHRVDVDFPKADLLLIMGTSLVVQPFCSL 214
                      +A L++++G+SLVV P   L
Sbjct: 169 DALREAIGLSSRASLMIVLGSSLVVYPAAEL 199

>pdb|2H4H|A Chain A, Sir2 H116y Mutant-P53 Peptide-Nad Length = 246

Iteration: 1
 Score =  102 bits (254), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 40/211 (18%)
Query: 5   AGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKE-LYPGSFKPTPCH 63
           +GIPDFR P +G+Y         +   +F++D+F   PE FY  AKE ++P         
Sbjct: 28  SGIPDFRGP-NGIYKK-------YSQNVFDIDFFYSHPEEFYRFAKEGIFP--------- 70
Query: 64  YFXXXXXXXXXXXRHFTQVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLP 123
                                   KP   H                TQNID L + AG  
Sbjct: 71  --------------------MLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAG-- 108
Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPS 183
             K++E +G+    +C+ C K Y+V  + +++ +  +P C+ CN L++P+IVFFGENLP 
Sbjct: 109 SKKVIELYGNVEEYYCVRCEKKYTVEDVIKKLESSDVPLCDDCNSLIRPNIVFFGENLPQ 168
Query: 184 RYFHRVDVDFPKADLLLIMGTSLVVQPFCSL 214
                      +A L++++G+SLVV P   L
Sbjct: 169 DALREAIGLSSRASLMIVLGSSLVVYPAAEL 199

>pdb|2H59|A Chain A, Sir2 H116a-Deacetylated P53 Peptide-3'-O-Acetyl Adp Ribose Length = 246

Iteration: 1
 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 40/211 (18%)
Query: 5   AGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKE-LYPGSFKPTPCH 63
           +GIPDFR P +G+Y         +   +F++D+F   PE FY  AKE ++P         
Sbjct: 28  SGIPDFRGP-NGIYKK-------YSQNVFDIDFFYSHPEEFYRFAKEGIFP--------- 70
Query: 64  YFXXXXXXXXXXXRHFTQVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLP 123
                                   KP   H                TQNID L + AG  
Sbjct: 71  --------------------MLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAG-- 108
Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPS 183
             K++E  G+    +C+ C K Y+V  + +++ +  +P C+ CN L++P+IVFFGENLP 
Sbjct: 109 SKKVIELAGNVEEYYCVRCEKKYTVEDVIKKLESSDVPLCDDCNSLIRPNIVFFGENLPQ 168
Query: 184 RYFHRVDVDFPKADLLLIMGTSLVVQPFCSL 214
                      +A L++++G+SLVV P   L
Sbjct: 169 DALREAIGLSSRASLMIVLGSSLVVYPAAEL 199

>pdb|1MA3|A Chain A, Structure Of A Sir2 Enzyme Bound To An Acetylated P53 Peptide Length = 253

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 80/211 (37%), Gaps = 39/211 (18%)
Query: 5   AGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHY 64
           +GIP FR    GL+   +      P  +  +  FK  P AF+  + E+    F       
Sbjct: 30  SGIPTFRGE-DGLWRKYD------PEEVASISGFKRNPRAFWEFSMEMKDKLFA------ 76
Query: 65  FXXXXXXXXXXXRHFTQVYWGSFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLPD 124
                                  +P P HY               TQNID L + AG   
Sbjct: 77  -----------------------EPNPAHYAIAELERMGIVKAVITQNIDMLHQRAG--S 111
Query: 125 DKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGL-VKPDIVFFGENLPS 183
            +++E HGS     CL C + Y  +   E      IP C KC    VKP +V FGE LP 
Sbjct: 112 RRVLELHGSMDKLDCLDCHETYDWSEFVEDFNKGEIPRCRKCGSYYVKPRVVLFGEPLPQ 171
Query: 184 RYFHRVDVDFPKADLLLIMGTSLVVQPFCSL 214
           R       +    D  +++G+SLVV P   L
Sbjct: 172 RTLFEAIEEAKHCDAFMVVGSSLVVYPAAEL 202

>pdb|1M2J|A Chain A, Sir2 Homologue H80n Mutant-Adp Ribose Complex Length = 249

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 109 FTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNG 168
            TQN+D+L   AG     ++  HGS     C +C   + V    +      +P C+KC  
Sbjct: 96  ITQNVDDLHERAG--SRNVIHLHGSLRVVRCTSCNNSFEVESAPK---IPPLPKCDKCGS 150
Query: 169 LVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSL 214
           L++P +V+FGE LP     R   +  +AD++++ GTS VVQP  SL
Sbjct: 151 LLRPGVVWFGEMLPPDVLDRAMREVERADVIIVAGTSAVVQPAASL 196

>pdb|1M2H|A Chain A, Sir2 Homologue S24a Mutant-adp Ribose Complex Length = 249

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 109 FTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNG 168
            TQN+D+L   AG     ++  HGS     C +C   + V    +      +P C+KC  
Sbjct: 96  ITQNVDDLHERAG--SRNVIHLHGSLRVVRCTSCNNSFEVESAPK---IPPLPKCDKCGS 150
Query: 169 LVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSL 214
           L++P +V+FGE LP     R   +  +AD++++ GTS VVQP  SL
Sbjct: 151 LLRPGVVWFGEMLPPDVLDRAMREVERADVIIVAGTSAVVQPAASL 196

>pdb|1M2G|A Chain A, Sir2 Homologue-Adp Ribose Complex Length = 249

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 109 FTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNG 168
            TQN+D+L   AG     ++  HGS     C +C   + V    +      +P C+KC  
Sbjct: 96  ITQNVDDLHERAG--SRNVIHLHGSLRVVRCTSCNNSFEVESAPK---IPPLPKCDKCGS 150
Query: 169 LVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSL 214
           L++P +V+FGE LP     R   +  +AD++++ GTS VVQP  SL
Sbjct: 151 LLRPGVVWFGEMLPPDVLDRAMREVERADVIIVAGTSAVVQPAASL 196

>pdb|1ICI|A Chain A, Crystal Structure Of A Sir2 Homolog-Nad Complex Length = 256

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 109 FTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNG 168
            TQN+D+L   AG     ++  HGS     C +C   + V    +      +P C+KC  
Sbjct: 107 ITQNVDDLHERAG--SRNVIHLHGSLRVVRCTSCNNSFEVESAPK---IPPLPKCDKCGS 161
Query: 169 LVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSL 214
           L++P +V+FGE LP     R   +  +AD++++ GTS VVQP  SL
Sbjct: 162 LLRPGVVWFGEMLPPDVLDRAMREVERADVIIVAGTSAVVQPAASL 207

>pdb|1M2K|A Chain A, Sir2 Homologue F159a Mutant-Adp Ribose Complex Length = 249

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 109 FTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNG 168
            TQN+D+L   AG     ++  HGS     C +C   + V    +      +P C+KC  
Sbjct: 96  ITQNVDDLHERAG--SRNVIHLHGSLRVVRCTSCNNSFEVESAPK---IPPLPKCDKCGS 150
Query: 169 LVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSL 214
           L++P +V+ GE LP     R   +  +AD++++ GTS VVQP  SL
Sbjct: 151 LLRPGVVWAGEMLPPDVLDRAMREVERADVIIVAGTSAVVQPAASL 196

>pdb|1M2N|A Chain A, Sir2 Homologues (D102gF159AR170A) MUTANT-2'-O-Acetyl Adp Ribose Complex Length = 249

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 109 FTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNG 168
            TQN+D L   AG     ++  HGS     C +C   + V    +      +P C+KC  
Sbjct: 96  ITQNVDGLHERAG--SRNVIHLHGSLRVVRCTSCNNSFEVESAPK---IPPLPKCDKCGS 150
Query: 169 LVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSL 214
           L++P +V+ GE LP         +  +AD++++ GTS VVQP  SL
Sbjct: 151 LLRPGVVWAGEMLPPDVLDAAMREVERADVIIVAGTSAVVQPAASL 196

>pdb|2B4Y|A Chain A, Crystal Structure Of Human Sirtuin Homolog 5 Length = 271

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 21/129 (16%)
Query: 109 FTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTC---RKDYSV--------------AWM 151
            TQNID L R AG  +  L+E HGS   + C +C    ++Y                   
Sbjct: 107 ITQNIDELHRKAGTKN--LLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQ 164
Query: 152 KERIFAEVIPTCEK--CNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQ 209
              I  E +P CE+  C GL++P +V+FGENL       VD +    DL L++GTS VV 
Sbjct: 165 DASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVY 224
Query: 210 PFCSLVDKV 218
           P      +V
Sbjct: 225 PAAXFAPQV 233

>pdb|4G1C|A Chain A, Human Sirt5 Bound To Succ-Idh2 And Carba-Nad Length = 267

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 21/129 (16%)
Query: 109 FTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTC---RKDYSV--------------AWM 151
            TQNID L R AG  +  L+E HGS   + C +C    ++Y                   
Sbjct: 103 ITQNIDELHRKAGTKN--LLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQ 160
Query: 152 KERIFAEVIPTCEK--CNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQ 209
              I  E +P CE+  C GL++P +V+FGENL       VD +    DL L++GTS VV 
Sbjct: 161 DASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVY 220
Query: 210 PFCSLVDKV 218
           P      +V
Sbjct: 221 PAAMFAPQV 229

>pdb|2NYR|A Chain A, Crystal Structure Of Human Sirtuin Homolog 5 In Complex With Suramin Length = 271

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 21/129 (16%)
Query: 109 FTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTC---RKDYSV--------------AWM 151
            TQNID L R AG  +  L+E HGS   + C +C    ++Y                   
Sbjct: 107 ITQNIDELHRKAGTKN--LLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQ 164
Query: 152 KERIFAEVIPTCEK--CNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQ 209
              I  E +P CE+  C GL++P +V+FGENL       VD +    DL L++GTS VV 
Sbjct: 165 DASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVY 224
Query: 210 PFCSLVDKV 218
           P      +V
Sbjct: 225 PAAMFAPQV 233

>pdb|3RIG|A Chain A, Sirt5 Is An Nad-Dependent Protein Lysine Demalonylase And Desuccinylase Length = 273

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 21/129 (16%)
Query: 109 FTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTC---RKDYSV--------------AWM 151
            TQNID L R AG  +  L+E HGS   + C +C    ++Y                   
Sbjct: 109 ITQNIDELHRKAGTKN--LLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQ 166
Query: 152 KERIFAEVIPTCEK--CNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQ 209
              I  E +P CE+  C GL++P +V+FGENL       VD +    DL L++GTS VV 
Sbjct: 167 DASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVY 226
Query: 210 PFCSLVDKV 218
           P      +V
Sbjct: 227 PAAMFAPQV 235

>pdb|4HDA|A Chain A, Crystal Structure Of Human Sirt5 In Complex With Fluor-de-lys Peptide And Resveratrol Length = 275

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 21/129 (16%)
Query: 109 FTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTC---RKDYSV--------------AWM 151
            TQNID L R AG  +  L+E HGS   + C +C    ++Y                   
Sbjct: 111 ITQNIDELHRKAGTKN--LLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQ 168
Query: 152 KERIFAEVIPTCEK--CNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQ 209
              I  E +P CE+  C GL++P +V+FGENL       VD +    DL L++GTS VV 
Sbjct: 169 DASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVY 228
Query: 210 PFCSLVDKV 218
           P      +V
Sbjct: 229 PAAMFAPQV 237

>pdb|3U31|A Chain A, Plasmodium Falciparum Sir2a Preferentially Hydrolyzes Medium And Long Chain Fatty Acyl Lysine Length = 290

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 110 TQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYS---VAWMKERIFAEVIPTCEKC 166
           TQN+D L   +G  + K++  HG+   + C TC K      +   K   F   +P    C
Sbjct: 130 TQNVDGLHEASG--NTKVISLHGNVFEAVCCTCNKIVKLNKIMLQKTSHFMHQLPPECPC 187
Query: 167 NGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLV--------DKV 218
            G+ KP+I+ FGE + S      + +  K DLLL++GTS  V    +L           V
Sbjct: 188 GGIFKPNIILFGEVVSSDLLKEAEEEIAKCDLLLVIGTSSTVSTATNLCHFACKKKKKIV 247
Query: 219 DVDFPKADLLLIMGTSLVVQPFCSLVDKTNI-RGSDSDN 256
           +++  K  +   M    V   F  L    NI +GS   N
Sbjct: 248 EINISKTYITNKMSDYHVCAKFSELTKVANILKGSSEKN 286

>pdb|3JWP|A Chain A, Crystal Structure Of Plasmodium Falciparum Sir2a (Pf13_0152) In Complex With Amp Length = 265

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 14/160 (8%)
Query: 109 FTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYS---VAWMKERIFAEVIPTCEK 165
            TQN+D L   +G  + K++  HG+   + C TC K      +   K   F   +P    
Sbjct: 104 VTQNVDGLHEASG--NTKVISLHGNVFEAVCCTCNKIVKLNKIXLQKTSHFXHQLPPECP 161
Query: 166 CNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLV--------DK 217
           C G+ KP+I+ FGE + S      + +  K DLLL++GTS  V    +L           
Sbjct: 162 CGGIFKPNIILFGEVVSSDLLKEAEEEIAKCDLLLVIGTSSTVSTATNLCHFACKKKKKI 221
Query: 218 VDVDFPKADLLLIMGTSLVVQPFCSLVDKTNI-RGSDSDN 256
           V+++  K  +        V   F  L    NI +GS   N
Sbjct: 222 VEINISKTYITNKXSDYHVCAKFSELTKVANILKGSSEKN 261

>pdb|3K35|A Chain A, Crystal Structure Of Human Sirt6 Length = 318

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 9/138 (6%)
Query: 86  SFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCR-- 143
           S +PT  H                +QN+D L   +G P DKL E HG+     C  C+  
Sbjct: 88  SARPTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQ 147
Query: 144 --KDYSVAWMKERIFAEVIPTCE-----KCNGLVKPDIVFFGENLPSRYFHRVDVDFPKA 196
             +D  V  M  +    +    +      C G ++  I+ + ++LP R     D     A
Sbjct: 148 YVRDTVVGTMGLKATGRLCTVAKARGLRACRGELRDTILDWEDSLPDRDLALADEASRNA 207
Query: 197 DLLLIMGTSLVVQPFCSL 214
           DL + +GTSL ++P  +L
Sbjct: 208 DLSITLGTSLQIRPSGNL 225

>pdb|3PKI|A Chain A, Human Sirt6 Crystal Structure In Complex With Adp Ribose Length = 355

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 9/138 (6%)
Query: 86  SFKPTPCHYFXXXXXXXXXXXRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCR-- 143
           S +PT  H                +QN+D L   +G P DKL E HG+     C  C+  
Sbjct: 88  SARPTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQ 147
Query: 144 --KDYSVAWMKERIFAEVIPTCE-----KCNGLVKPDIVFFGENLPSRYFHRVDVDFPKA 196
             +D  V  M  +    +    +      C G ++  I+ + ++LP R     D     A
Sbjct: 148 YVRDTVVGTMGLKATGRLCTVAKARGLRACRGELRDTILDWEDSLPDRDLALADEASRNA 207
Query: 197 DLLLIMGTSLVVQPFCSL 214
           DL + +GTSL ++P  +L
Sbjct: 208 DLSITLGTSLQIRPSGNL 225

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	494
3glr_A	285	NAD-dependent deacetylase sirtuin-3, mitochondria;	3e-94
3glr_A	285	NAD-dependent deacetylase sirtuin-3, mitochondria;	2e-24
3glr_A	285	NAD-dependent deacetylase sirtuin-3, mitochondria;	2e-04
1j8f_A	323	SIRT2, sirtuin 2, isoform 1, silencing INFO; gene	6e-94
1j8f_A	323	SIRT2, sirtuin 2, isoform 1, silencing INFO; gene	5e-30
1j8f_A	323	SIRT2, sirtuin 2, isoform 1, silencing INFO; gene	2e-08
1q1a_A	289	HST2 protein; ternary complex, histone deacetylase	1e-91
1q1a_A	289	HST2 protein; ternary complex, histone deacetylase	2e-24
1q14_A	361	HST2 protein; histone deacetylase, hydrolase; 2.50	3e-88
1q14_A	361	HST2 protein; histone deacetylase, hydrolase; 2.50	2e-23
2hjh_A	354	NAD-dependent histone deacetylase SIR2; protein, s	1e-84
2hjh_A	354	NAD-dependent histone deacetylase SIR2; protein, s	2e-17
1yc5_A	246	NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM,	1e-78
1yc5_A	246	NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM,	2e-12
3k35_A	318	NAD-dependent deacetylase sirtuin-6; rossmann fold	9e-70
3k35_A	318	NAD-dependent deacetylase sirtuin-6; rossmann fold	2e-18
3pki_A	355	NAD-dependent deacetylase sirtuin-6; ADP ribose, s	3e-69
3pki_A	355	NAD-dependent deacetylase sirtuin-6; ADP ribose, s	2e-18
3u31_A	290	SIR2A, transcriptional regulatory protein SIR2 hom	2e-49
3u31_A	290	SIR2A, transcriptional regulatory protein SIR2 hom	1e-05
1ma3_A	253	SIR2-AF2, transcriptional regulatory protein, SIR2	7e-44
1ma3_A	253	SIR2-AF2, transcriptional regulatory protein, SIR2	3e-04
1m2k_A	249	Silent information regulator 2; protein-ligand com	6e-42
1m2k_A	249	Silent information regulator 2; protein-ligand com	3e-04
1s5p_A	235	NAD-dependent deacetylase; protein deacetylase, SI	7e-38
3riy_A	273	NAD-dependent deacetylase sirtuin-5; desuccinylase	2e-30
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06

>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A Length = 285

 Score =  286 bits (733), Expect = 3e-94
 Identities = 114/227 (50%), Positives = 143/227 (62%), Gaps = 34/227 (14%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
            +GIPDFRSPGSGLY NL++Y LP+P AIFEL +F H P+ F+TLAKELYPG++KP   H
Sbjct: 37  PSGIPDFRSPGSGLYSNLQQYDLPYPEAIFELPFFFHNPKPFFTLAKELYPGNYKPNVTH 96

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
           YFL+LLH K LLLR +TQ                              NID LER++G+P
Sbjct: 97  YFLRLLHDKGLLLRLYTQ------------------------------NIDGLERVSGIP 126

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPS 183
             KLVEAHG+F ++ C  C++ +    ++  + A+ +P C  C G+VKPDIVFFGE LP 
Sbjct: 127 ASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCPVCTGVVKPDIVFFGEPLPQ 186

Query: 184 RYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLI 230
           R F    VDFP ADLLLI+GTSL V+PF SL + V    P    LLI
Sbjct: 187 R-FLLHVVDFPMADLLLILGTSLEVEPFASLTEAVRSSVP---RLLI 229

>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A Length = 285

 Score =  101 bits (254), Expect = 2e-24
 Identities = 44/176 (25%), Positives = 66/176 (37%), Gaps = 39/176 (22%)

Query: 256 NIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLL----------GRMG 305
           NID LER++G+P  KLVEAHG+F ++ C  C++ +    ++   +           G + 
Sbjct: 115 NIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCPVCTGVVK 174

Query: 306 ITLGLHAGGL-SSIPGGAEVFSA--LCLEFG----VHSAS-----APPHCPRLLINKEKV 353
             +      L          F    L L  G    V   +          PRLLIN++ V
Sbjct: 175 PDIVFFGEPLPQRFLLHVVDFPMADLLLILGTSLEVEPFASLTEAVRSSVPRLLINRDLV 234

Query: 354 GVGSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLL 409
           G                         RDV   GD   G + L ++LGW   +  L+
Sbjct: 235 G-----------------PLAWHPRSRDVAQLGDVVHGVESLVELLGWTEEMRDLV 273

>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A Length = 285

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 461 FDNENNVRDVFLEGDCDSGCQKLADMLGWGKDI 493
                  RDV   GD   G + L ++LGW +++
Sbjct: 237 LAWHPRSRDVAQLGDVVHGVESLVELLGWTEEM 269

>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5 Length = 323

 Score =  287 bits (735), Expect = 6e-94
 Identities = 130/229 (56%), Positives = 156/229 (68%), Gaps = 35/229 (15%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSP +GLYDNLEKY LP+P AIFE+ YFK  PE F+ LAKELYPG FKPT CH
Sbjct: 57  SAGIPDFRSPSTGLYDNLEKYHLPYPEAIFEISYFKKHPEPFFALAKELYPGQFKPTICH 116

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
           YF++LL  K LLLR +TQ                              NID LERIAGL 
Sbjct: 117 YFMRLLKDKGLLLRCYTQ------------------------------NIDTLERIAGLE 146

Query: 124 DDKLVEAHGSFHTSHCL--TCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENL 181
            + LVEAHG+F+TSHC+  +CR +Y ++WMKE+IF+EV P CE C  LVKPDIVFFGE+L
Sbjct: 147 QEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSEVTPKCEDCQSLVKPDIVFFGESL 206

Query: 182 PSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLI 230
           P+R+F  +  DF K DLLL+MGTSL VQPF SL+ K  +  P+   LLI
Sbjct: 207 PARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISKAPLSTPR---LLI 252

>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5 Length = 323

 Score =  118 bits (297), Expect = 5e-30
 Identities = 70/181 (38%), Positives = 93/181 (51%), Gaps = 32/181 (17%)

Query: 256 NIDNLERIAGLPDDKLVEAHGSFHTSHCL--TCRKDYSVAWMKE-------------GNL 300
           NID LERIAGL  + LVEAHG+F+TSHC+  +CR +Y ++WMKE              +L
Sbjct: 135 NIDTLERIAGLEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSEVTPKCEDCQSL 194

Query: 301 LGRMGITL---GLHAGGLSSIPGGAEVFSA-LCLEFG----VHSAS-----APPHCPRLL 347
           + +  I      L A   S +   ++     L L  G    V   +     AP   PRLL
Sbjct: 195 V-KPDIVFFGESLPARFFSCMQ--SDFLKVDLLLVMGTSLQVQPFASLISKAPLSTPRLL 251

Query: 348 INKEKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMG 407
           INKEK G       M ++GL  G+ FD++   RDV   G+CD GC  LA++LGW   L  
Sbjct: 252 INKEKAGQSDPFLGM-IMGLGGGMDFDSKKAYRDVAWLGECDQGCLALAELLGWKKELED 310

Query: 408 L 408
           L
Sbjct: 311 L 311

>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5 Length = 323

 Score = 54.8 bits (132), Expect = 2e-08
 Identities = 19/42 (45%), Positives = 29/42 (69%)

Query: 452 LLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGKDI 493
           ++GL  G+ FD++   RDV   G+CD GC  LA++LGW K++
Sbjct: 267 IMGLGGGMDFDSKKAYRDVAWLGECDQGCLALAELLGWKKEL 308

>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A* Length = 289

 Score =  280 bits (717), Expect = 1e-91
 Identities = 103/289 (35%), Positives = 145/289 (50%), Gaps = 51/289 (17%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           + GIPDFRSPG+GLY NL + KLP+P A+F++D+F+  P  FYTLAKELYPG+F+P+  H
Sbjct: 34  SCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYTLAKELYPGNFRPSKFH 93

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
           Y LKL   K++L R +TQ                              NID LER AG+ 
Sbjct: 94  YLLKLFQDKDVLKRVYTQ------------------------------NIDTLERQAGVK 123

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI---PTCEKCNGLVKPDIVFFGEN 180
           DD ++EAHGSF   HC+ C K Y     K ++    I     C+ C  LVKP IVFFGE+
Sbjct: 124 DDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELVKPAIVFFGED 183

Query: 181 LPSRYFHRVDVD-------------FPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADL 227
           LP  +      D              P+  L++++GTSL V PF SL +++     +  +
Sbjct: 184 LPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASLPEEIPRKVKR--V 241

Query: 228 LLIMGTSLVVQPFCSLVDKTNIRGSDSDNIDNLERIAGLPDD--KLVEA 274
           L  + T    +      D   +     +  + L    G  +D  K++ A
Sbjct: 242 LCNLETVGDFKANKRPTDLI-VHQYSDEFAEQLVEELGWQEDFEKILTA 289

>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A* Length = 289

 Score =  101 bits (254), Expect = 2e-24
 Identities = 40/193 (20%), Positives = 53/193 (27%), Gaps = 56/193 (29%)

Query: 256 NIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMG---------- 305
           NID LER AG+ DD ++EAHGSF   HC+ C K Y     K       +           
Sbjct: 112 NIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGE 171

Query: 306 ------------------------ITLGLHAGGLSSIPGGAEVF-----SALCLEFGVHS 336
                                             S       +      S     F    
Sbjct: 172 LVKPAIVFFGEDLPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASLP 231

Query: 337 ASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLA 396
              P    R+L N E VG                  F       D+ +    D   ++L 
Sbjct: 232 EEIPRKVKRVLCNLETVG-----------------DFKANKRPTDLIVHQYSDEFAEQLV 274

Query: 397 DMLGWGIPLMGLL 409
           + LGW      +L
Sbjct: 275 EELGWQEDFEKIL 287

>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 Length = 361

 Score =  273 bits (700), Expect = 3e-88
 Identities = 95/231 (41%), Positives = 127/231 (54%), Gaps = 46/231 (19%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           + GIPDFRSPG+GLY NL + KLP+P A+F++D+F+  P  FYTLAKELYPG+F+P+  H
Sbjct: 42  SCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYTLAKELYPGNFRPSKFH 101

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
           Y LKL   K++L R +TQ                              NID LER AG+ 
Sbjct: 102 YLLKLFQDKDVLKRVYTQ------------------------------NIDTLERQAGVK 131

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI---PTCEKCNGLVKPDIVFFGEN 180
           DD ++EAHGSF   HC+ C K Y     K ++    I     C+ C  LVKP IVFFGE+
Sbjct: 132 DDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELVKPAIVFFGED 191

Query: 181 LPSRYFHRVDVD-------------FPKADLLLIMGTSLVVQPFCSLVDKV 218
           LP  +      D              P+  L++++GTSL V PF SL +++
Sbjct: 192 LPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASLPEEI 242

>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 Length = 361

 Score =  100 bits (250), Expect = 2e-23
 Identities = 40/193 (20%), Positives = 53/193 (27%), Gaps = 56/193 (29%)

Query: 256 NIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMG---------- 305
           NID LER AG+ DD ++EAHGSF   HC+ C K Y     K       +           
Sbjct: 120 NIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGE 179

Query: 306 ------------------------ITLGLHAGGLSSIPGGAEVF-----SALCLEFGVHS 336
                                             S       +      S     F    
Sbjct: 180 LVKPAIVFFGEDLPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASLP 239

Query: 337 ASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLA 396
              P    R+L N E VG                  F       D+ +    D   ++L 
Sbjct: 240 EEIPRKVKRVLCNLETVG-----------------DFKANKRPTDLIVHQYSDEFAEQLV 282

Query: 397 DMLGWGIPLMGLL 409
           + LGW      +L
Sbjct: 283 EELGWQEDFEKIL 295

>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae} Length = 354

 Score =  264 bits (676), Expect = 1e-84
 Identities = 76/257 (29%), Positives = 108/257 (42%), Gaps = 66/257 (25%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           + GIPDFRS   G Y  ++   L  P  +F  + F H P  FY +A  +           
Sbjct: 60  SLGIPDFRSSE-GFYSKIKHLGLDDPQDVFNYNIFMHDPSVFYNIANMVL---------- 108

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                     +P H F+K+L  K  LLR++TQNIDNLE  AG+ 
Sbjct: 109 --------------------PPEKIYSPLHSFIKMLQMKGKLLRNYTQNIDNLESYAGIS 148

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEK------------------ 165
            DKLV+ HGSF T+ C+TC  +     +  +I    +P C                    
Sbjct: 149 TDKLVQCHGSFATATCVTCHWNLPGERIFNKIRNLELPLCPYCYKKRREYFPEGYNNKVG 208

Query: 166 -----------------CNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVV 208
                              G++KPDI FFGE LP+++   +  D  + DLL+ +GTSL V
Sbjct: 209 VAASQGSMSERPPYILNSYGVLKPDITFFGEALPNKFHKSIREDILECDLLICIGTSLKV 268

Query: 209 QPFCSLVDKVDVDFPKA 225
            P   +V+ V    P+ 
Sbjct: 269 APVSEIVNMVPSHVPQV 285

>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae} Length = 354

 Score = 82.6 bits (204), Expect = 2e-17
 Identities = 49/206 (23%), Positives = 75/206 (36%), Gaps = 32/206 (15%)

Query: 256 NIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAGGL 315
           NIDNLE  AG+  DKLV+ HGSF T+ C+TC  +     +        + +    +    
Sbjct: 137 NIDNLESYAGISTDKLVQCHGSFATATCVTCHWNLPGERIFNKIRNLELPLCPYCYKKRR 196

Query: 316 SSIPGGAEVFSALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGFDN 375
              P G      +    G  S   PP+             G   P +   G  E L    
Sbjct: 197 EYFPEGYNNKVGVAASQGSMS-ERPPYILN--------SYGVLKPDITFFG--EALPNKF 245

Query: 376 ENNVRDVFLEGDCD-----------SGCQKLADMLGWGIPLMGL-LGLSEGLGFDNENNV 423
             ++R+  LE  CD           +   ++ +M+   +P + +     +   FD     
Sbjct: 246 HKSIREDILE--CDLLICIGTSLKVAPVSEIVNMVPSHVPQVLINRDPVKHAEFD----- 298

Query: 424 RDVFLEGDCDSGCQKLADMLGWGIPL 449
             + L G CD     +A   GW IP 
Sbjct: 299 --LSLLGYCDDIAAMVAQKCGWTIPH 322

>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A* Length = 246

 Score =  244 bits (626), Expect = 1e-78
 Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 40/216 (18%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKE-LYPGSFKPTPC 62
            +GIPDFR P  G+Y         +   +F++D+F   PE FY  AKE ++P        
Sbjct: 27  PSGIPDFRGPN-GIYKK-------YSQNVFDIDFFYSHPEEFYRFAKEGIFPML------ 72

Query: 63  HYFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGL 122
                                    KP   H  L  L +K L+    TQNID L + AG 
Sbjct: 73  -----------------------QAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAG- 108

Query: 123 PDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLP 182
              K++E HG+    +C+ C K Y+V  + +++ +  +P C+ CN L++P+IVFFGENLP
Sbjct: 109 -SKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDVPLCDDCNSLIRPNIVFFGENLP 167

Query: 183 SRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKV 218
                       +A L++++G+SLVV P   L    
Sbjct: 168 QDALREAIGLSSRASLMIVLGSSLVVYPAAELPLIT 203

>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A* Length = 246

 Score = 65.6 bits (161), Expect = 2e-12
 Identities = 31/172 (18%), Positives = 57/172 (33%), Gaps = 51/172 (29%)

Query: 256 NIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAGGL 315
           NID L + AG    K++E HG+    +C+ C K Y+V  + +   L    + L      L
Sbjct: 99  NIDRLHQRAG--SKKVIELHGNVEEYYCVRCEKKYTVEDVIK--KLESSDVPLCDDCNSL 154

Query: 316 ---------SSIPGGA--EVFSA-----LCLEFG----VHSASAPPH------CPRLLIN 349
                     ++P  A  E         L +  G    V+ A+  P          +++N
Sbjct: 155 IRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVN 214

Query: 350 KEKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGW 401
             +                    FD   ++  +    D     +++ +  G 
Sbjct: 215 LGET------------------PFD---DIATLKYNMDVVEFARRVMEEGGI 245

>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens} Length = 318

 Score =  224 bits (573), Expect = 9e-70
 Identities = 52/224 (23%), Positives = 77/224 (34%), Gaps = 61/224 (27%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           A+GIPDFR P  G++   E+   P     FE                             
Sbjct: 58  ASGIPDFRGPH-GVWTMEERGLAPKFDTTFE----------------------------- 87

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                 S +PT  H  L  L +  LL    +QN+D L   +G P
Sbjct: 88  ----------------------SARPTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFP 125

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAE---------VIPTCEKCNGLVKPDI 174
            DKL E HG+     C  C+  Y    +   +  +                C G ++  I
Sbjct: 126 RDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGLKATGRLCTVAKARGLRACRGELRDTI 185

Query: 175 VFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKV 218
           + + ++LP R     D     ADL + +GTSL ++P  +L    
Sbjct: 186 LDWEDSLPDRDLALADEASRNADLSITLGTSLQIRPSGNLPLAT 229

>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens} Length = 318

 Score = 85.1 bits (211), Expect = 2e-18
 Identities = 31/182 (17%), Positives = 47/182 (25%), Gaps = 54/182 (29%)

Query: 256 NIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAGGL 315
           N+D L   +G P DKL E HG+     C  C+  Y    +     L   G    +     
Sbjct: 114 NVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGLKATGRLCTVAKARG 173

Query: 316 SSIPGG--------------AEVFSA---------LCLEFG----VHSAS-----APPHC 343
                G                  +          L +  G    +  +           
Sbjct: 174 LRACRGELRDTILDWEDSLPDRDLALADEASRNADLSITLGTSLQIRPSGNLPLATKRRG 233

Query: 344 PRL-LINKEKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWG 402
            RL ++N +                      D      D+ + G  D    +L   LG  
Sbjct: 234 GRLVIVNLQPT------------------KHDRH---ADLRIHGYVDEVMTRLMKHLGLE 272

Query: 403 IP 404
           IP
Sbjct: 273 IP 274

>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A* Length = 355

 Score =  224 bits (572), Expect = 3e-69
 Identities = 52/224 (23%), Positives = 77/224 (34%), Gaps = 61/224 (27%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           A+GIPDFR P  G++   E+   P     FE                             
Sbjct: 58  ASGIPDFRGPH-GVWTMEERGLAPKFDTTFE----------------------------- 87

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                 S +PT  H  L  L +  LL    +QN+D L   +G P
Sbjct: 88  ----------------------SARPTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFP 125

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAE---------VIPTCEKCNGLVKPDI 174
            DKL E HG+     C  C+  Y    +   +  +                C G ++  I
Sbjct: 126 RDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGLKATGRLCTVAKARGLRACRGELRDTI 185

Query: 175 VFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKV 218
           + + ++LP R     D     ADL + +GTSL ++P  +L    
Sbjct: 186 LDWEDSLPDRDLALADEASRNADLSITLGTSLQIRPSGNLPLAT 229

>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A* Length = 355

 Score = 85.6 bits (212), Expect = 2e-18
 Identities = 31/183 (16%), Positives = 48/183 (26%), Gaps = 54/183 (29%)

Query: 256 NIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAGGL 315
           N+D L   +G P DKL E HG+     C  C+  Y    +     L   G    +     
Sbjct: 114 NVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGLKATGRLCTVAKARG 173

Query: 316 SSIPGG--------------AEVFSA---------LCLEFG----VHSAS-----APPHC 343
                G                  +          L +  G    +  +           
Sbjct: 174 LRACRGELRDTILDWEDSLPDRDLALADEASRNADLSITLGTSLQIRPSGNLPLATKRRG 233

Query: 344 PRL-LINKEKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWG 402
            RL ++N +                      D      D+ + G  D    +L + LG  
Sbjct: 234 GRLVIVNLQPT------------------KHDRH---ADLRIHGYVDEVMTRLMEHLGLE 272

Query: 403 IPL 405
           IP 
Sbjct: 273 IPA 275

>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A* Length = 290

 Score =  170 bits (433), Expect = 2e-49
 Identities = 49/214 (22%), Positives = 78/214 (36%), Gaps = 40/214 (18%)

Query: 6   GIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYF 65
            IP FR   + ++    KY    P     +  F   PE  + + +++             
Sbjct: 61  NIPSFRGSSNSIW---SKYD---PRIYGTIWGFWKYPEKIWEVIRDISSDY--------- 105

Query: 66  LKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDD 125
                                 +    H  L  L     L    TQN+D L   +G  + 
Sbjct: 106 --------------------EIEINNGHVALSTLESLGYLKSVVTQNVDGLHEASG--NT 143

Query: 126 KLVEAHGSFHTSHCLTCRKDYSVAWM---KERIFAEVIPTCEKCNGLVKPDIVFFGENLP 182
           K++  HG+   + C TC K   +  +   K   F   +P    C G+ KP+I+ FGE + 
Sbjct: 144 KVISLHGNVFEAVCCTCNKIVKLNKIMLQKTSHFMHQLPPECPCGGIFKPNIILFGEVVS 203

Query: 183 SRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVD 216
           S      + +  K DLLL++GTS  V    +L  
Sbjct: 204 SDLLKEAEEEIAKCDLLLVIGTSSTVSTATNLCH 237

>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A* Length = 290

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 256 NIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKE 297
           N+D L   +G  + K++  HG+   + C TC K   +  +  
Sbjct: 132 NVDGLHEASG--NTKVISLHGNVFEAVCCTCNKIVKLNKIML 171

>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A* Length = 253

 Score =  154 bits (391), Expect = 7e-44
 Identities = 62/212 (29%), Positives = 85/212 (40%), Gaps = 39/212 (18%)

Query: 6   GIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYF 65
           GIP FR    GL+    KY    P  +  +  FK  P AF+  + E+    F        
Sbjct: 31  GIPTFRGED-GLW---RKYD---PEEVASISGFKRNPRAFWEFSMEMKDKLFA------- 76

Query: 66  LKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDD 125
                                 +P P HY +  L +  ++    TQNID L + AG    
Sbjct: 77  ----------------------EPNPAHYAIAELERMGIVKAVITQNIDMLHQRAG--SR 112

Query: 126 KLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNG-LVKPDIVFFGENLPSR 184
           +++E HGS     CL C + Y  +   E      IP C KC    VKP +V FGE LP R
Sbjct: 113 RVLELHGSMDKLDCLDCHETYDWSEFVEDFNKGEIPRCRKCGSYYVKPRVVLFGEPLPQR 172

Query: 185 YFHRVDVDFPKADLLLIMGTSLVVQPFCSLVD 216
                  +    D  +++G+SLVV P   L  
Sbjct: 173 TLFEAIEEAKHCDAFMVVGSSLVVYPAAELPY 204

>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A* Length = 253

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 256 NIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKE 297
           NID L + AG    +++E HGS     CL C + Y  +   E
Sbjct: 101 NIDMLHQRAG--SRRVLELHGSMDKLDCLDCHETYDWSEFVE 140

>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A* Length = 249

 Score =  148 bits (377), Expect = 6e-42
 Identities = 54/213 (25%), Positives = 86/213 (40%), Gaps = 40/213 (18%)

Query: 6   GIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYF 65
           GIP FR    GL+    +Y+   P  +     F   PE  +    + Y          + 
Sbjct: 28  GIPTFRGKD-GLW---NRYR---PEELANPQAFAKDPEKVW----KWY---------AWR 67

Query: 66  LKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDD 125
           ++ +                  +P   H     L +  +L    TQN+D+L   AG    
Sbjct: 68  MEKVFNA---------------QPNKAHQAFAELERLGVLKCLITQNVDDLHERAG--SR 110

Query: 126 KLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPSRY 185
            ++  HGS     C +C   + V    +      +P C+KC  L++P +V+ GE LP   
Sbjct: 111 NVIHLHGSLRVVRCTSCNNSFEVESAPK---IPPLPKCDKCGSLLRPGVVWAGEMLPPDV 167

Query: 186 FHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKV 218
             R   +  +AD++++ GTS VVQP  SL   V
Sbjct: 168 LDRAMREVERADVIIVAGTSAVVQPAASLPLIV 200

>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A* Length = 249

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 2/48 (4%)

Query: 256 NIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGR 303
           N+D+L   AG     ++  HGS     C +C   + V    +   L +
Sbjct: 99  NVDDLHERAG--SRNVIHLHGSLRVVRCTSCNNSFEVESAPKIPPLPK 144

>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5 Length = 235

 Score =  137 bits (348), Expect = 7e-38
 Identities = 46/217 (21%), Positives = 72/217 (33%), Gaps = 47/217 (21%)

Query: 6   GIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPE---AFYTLAKELYPGSFKPTPC 62
           GI  FR+   GL+   E+++      +   + F   PE   AFY   +            
Sbjct: 17  GIRTFRAAD-GLW---EEHR---VEDVATPEGFDRDPELVQAFYNARRR----------- 58

Query: 63  HYFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFL-KLLHQKNLLLRHFTQNIDNLERIAG 121
                             Q+     +P   H  L KL           TQNIDNL   AG
Sbjct: 59  ------------------QLQQPEIQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAG 100

Query: 122 LPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENL 181
             +  ++  HG      C    +          +  E    C +    ++P +V+FGE  
Sbjct: 101 --NTNVIHMHGELLKVRCSQSGQVLD---WTGDVTPEDKCHCCQFPAPLRPHVVWFGEMP 155

Query: 182 PSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKV 218
                  + +    AD+ + +GTS  V P    V + 
Sbjct: 156 LG--MDEIYMALSMADIFIAIGTSGHVYPAAGFVHEA 190

>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} PDB: 3rig_A* 2b4y_A* 2nyr_A* Length = 273

 Score =  118 bits (298), Expect = 2e-30
 Identities = 58/239 (24%), Positives = 82/239 (34%), Gaps = 66/239 (27%)

Query: 6   GIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPE---AFYTLAKELYPGSFKPTPC 62
           G+P FR  G G +    K++      +     F H P     FY                
Sbjct: 37  GVPTFRGAG-GYW---RKWQ---AQDLATPLAFAHNPSRVWEFY---------------- 73

Query: 63  HYFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFL----KLLHQKNLLLRHFTQNIDNLER 118
                     +              +P   H  +      L ++   +   TQNID L R
Sbjct: 74  ----------HYRREVMGSK-----EPNAGHRAIAECETRLGKQGRRVVVITQNIDELHR 118

Query: 119 IAGLPDDKLVEAHGSFHTSHCLTCRKDYS-----------------VAWMKERIFAEVIP 161
            AG     L+E HGS   + C +C                             I  E +P
Sbjct: 119 KAG--TKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLP 176

Query: 162 TCEK--CNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKV 218
            CE+  C GL++P +V+FGENL       VD +    DL L++GTS VV P      +V
Sbjct: 177 RCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQV 235

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.5 bits (117), Expect = 2e-06
 Identities = 32/276 (11%), Positives = 77/276 (27%), Gaps = 99/276 (35%)

Query: 20  NLEKYKLP------HPMA---IFEL--------DYFKHRP--------EAFYTLAKELYP 54
           +     LP      +P     I E         D +KH          E+       L P
Sbjct: 312 DCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSL---NVLEP 368

Query: 55  GSFKPTPCHYFLKL-LHQKNL-----LLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRH 108
             ++      F +L +   +      LL     + W     +     +  LH+ +L+ + 
Sbjct: 369 AEYR----KMFDRLSVFPPSAHIPTILL----SLIWFDVIKSDVMVVVNKLHKYSLVEKQ 420

Query: 109 FTQN--------IDNLERIAGLPD--DKLVEA-----------------------HGSFH 135
             ++        ++   ++         +V+                        H   H
Sbjct: 421 PKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH 480

Query: 136 TSHCLTCRK---------DYSVAWMKERIFAEVIPTCEKCNGLVKPDIV-------FFGE 179
             +     +         D+   +++++I  +        +G +   +        +  +
Sbjct: 481 LKNIEHPERMTLFRMVFLDFR--FLEQKIRHDSTAWN--ASGSILNTLQQLKFYKPYICD 536

Query: 180 NLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLV 215
           N P   + R+       D L  +  +L+   +  L+
Sbjct: 537 NDP--KYERLVNAI--LDFLPKIEENLICSKYTDLL 568

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	494
3glr_A	285	NAD-dependent deacetylase sirtuin-3, mitochondria;	100.0
1j8f_A	323	SIRT2, sirtuin 2, isoform 1, silencing INFO; gene	100.0
1q1a_A	289	HST2 protein; ternary complex, histone deacetylase	100.0
1q14_A	361	HST2 protein; histone deacetylase, hydrolase; 2.50	100.0
4iao_A	492	NAD-dependent histone deacetylase SIR2; protein co	100.0
1yc5_A	246	NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM,	100.0
1ma3_A	253	SIR2-AF2, transcriptional regulatory protein, SIR2	100.0
1m2k_A	249	Silent information regulator 2; protein-ligand com	100.0
3u31_A	290	SIR2A, transcriptional regulatory protein SIR2 hom	100.0
2hjh_A	354	NAD-dependent histone deacetylase SIR2; protein, s	100.0
3riy_A	273	NAD-dependent deacetylase sirtuin-5; desuccinylase	100.0
1s5p_A	235	NAD-dependent deacetylase; protein deacetylase, SI	100.0
3k35_A	318	NAD-dependent deacetylase sirtuin-6; rossmann fold	100.0
3pki_A	355	NAD-dependent deacetylase sirtuin-6; ADP ribose, s	100.0
3glr_A	285	NAD-dependent deacetylase sirtuin-3, mitochondria;	100.0
1j8f_A	323	SIRT2, sirtuin 2, isoform 1, silencing INFO; gene	100.0
2hjh_A	354	NAD-dependent histone deacetylase SIR2; protein, s	99.97
4iao_A	492	NAD-dependent histone deacetylase SIR2; protein co	99.97
3k35_A	318	NAD-dependent deacetylase sirtuin-6; rossmann fold	99.97
1yc5_A	246	NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM,	99.97
3pki_A	355	NAD-dependent deacetylase sirtuin-6; ADP ribose, s	99.96
1ma3_A	253	SIR2-AF2, transcriptional regulatory protein, SIR2	99.96
1m2k_A	249	Silent information regulator 2; protein-ligand com	99.96
1q1a_A	289	HST2 protein; ternary complex, histone deacetylase	99.96
1s5p_A	235	NAD-dependent deacetylase; protein deacetylase, SI	99.95
1q14_A	361	HST2 protein; histone deacetylase, hydrolase; 2.50	99.95
3u31_A	290	SIR2A, transcriptional regulatory protein SIR2 hom	99.95
3riy_A	273	NAD-dependent deacetylase sirtuin-5; desuccinylase	99.95
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	82.19

>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*

Probab=100.00  E-value=3.2e-60  Score=473.94  Aligned_cols=197  Identities=57%  Similarity=1.039  Sum_probs=174.1

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+++|+|+++.++++++|++++++++|.+||+.||+|++.++..                         
T Consensus        34 ISteSGIPdFR~~~~Glw~~~~~~~l~~pe~~~~~~~f~~~P~~f~~~~~~~~~~-------------------------   88 (285)
T 3glr_A           34 ISTPSGIPDFRSPGSGLYSNLQQYDLPYPEAIFELPFFFHNPKPFFTLAKELYPG-------------------------   88 (285)
T ss_dssp             GTGGGTCCCTTSSSSHHHHHHHTTCCSSGGGGGCHHHHHHCCHHHHHHHHHHSTT-------------------------
T ss_pred             cchhhCCCCcccCCCccccchhccCCCCHHHHhCHHHHhhCcHHHHHHHHHhhhc-------------------------
Confidence            7899999999998459999988889888999999999999999999998877642                         


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCC
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI  160 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~  160 (494)
                           +++||++|++|++|+++|++++||||||||||++||+|+++|+|+||++++.+|+.|++.|+.+++...+....+
T Consensus        89 -----~a~Pn~~H~~La~Le~~g~l~~viTQNIDgLh~rAG~~~~~VielHGs~~~~~C~~C~~~~~~~~~~~~i~~~~~  163 (285)
T 3glr_A           89 -----NYKPNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRV  163 (285)
T ss_dssp             -----SCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCGGGEEETTEEEEEEEETTTCCEEEGGGGHHHHHTTCC
T ss_pred             -----cCCCCHHHHHHHHHHHcCCCceEEeeeecchHhhcCCCcccEEEecCCCCeEEECCCCCcCCHHHHHHHhhcCCC
Confidence                 456777777777799999999999999999999999999999999999999999999999988777666777789


Q ss_pred             CCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEe
Q psy11832        161 PTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIM  231 (494)
Q Consensus       161 P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN  231 (494)
                      |+|+.|||.|||+||||||++|...+ .+.+++++||++|||||||+|+|+++++..+   ..++.+|+||
T Consensus       164 P~C~~Cgg~lrP~IV~FGE~lp~~~~-~~~~~~~~aDlllviGTSl~V~Paa~l~~~~---~~~~~~v~IN  230 (285)
T 3glr_A          164 PRCPVCTGVVKPDIVFFGEPLPQRFL-LHVVDFPMADLLLILGTSLEVEPFASLTEAV---RSSVPRLLIN  230 (285)
T ss_dssp             CBCTTTCCBEEEEECCTTSBCCGGGG-GHHHHHHHCSEEEEESCCCCEETTGGGGGSS---CTTSCEEEEE
T ss_pred             CCCCCCCCccCCcEEEeCCcCCHHHH-HHHHHHhcCCEEEEeCCCCccccHHHHHHHH---hCCCcEEEEC
Confidence            99999999999999999999999877 4577889999999999999999999998765   2344555555

>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5

Probab=100.00  E-value=1.2e-57  Score=464.05  Aligned_cols=202  Identities=64%  Similarity=1.145  Sum_probs=180.5

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+++|+|+++.++++++|++++++++|.+||+.||+|++.++.                          
T Consensus        54 iSt~SGIPdfR~~~~Glw~~~~~~~l~~p~~~~~~~~f~~~p~~f~~~~r~~~~--------------------------  107 (323)
T 1j8f_A           54 ISTSAGIPDFRSPSTGLYDNLEKYHLPYPEAIFEISYFKKHPEPFFALAKELYP--------------------------  107 (323)
T ss_dssp             GTGGGTCCCTTCSCSTTSTTTTTTCCSSGGGGGBHHHHHHCCHHHHHHHHHHSS--------------------------
T ss_pred             hhHhhCCCcccCCCccHHHHhhhcCCCCHHHHcCHHHHhcCHHHHHHHHHHHhh--------------------------
Confidence            689999999999944999998888888899999999999999999999877653                          


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCC--CCcccchHHHHHHHhhc
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLT--CRKDYSVAWMKERIFAE  158 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~--C~~~~~~~~~~~~i~~~  158 (494)
                          .+++||++|++|++|+++|++++||||||||||++||+|+++|+|+||+++..+|++  |++.|+.++..+.+...
T Consensus       108 ----~~a~Pn~~H~aLa~L~~~g~~~~viTQNIDgLh~~AG~~~~~VielHGs~~~~~C~~~~C~~~~~~~~~~~~i~~~  183 (323)
T 1j8f_A          108 ----GQFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSE  183 (323)
T ss_dssp             ----SSCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCGGGEEETTEEEEEEEESCTTTCCEECHHHHHHHHHTT
T ss_pred             ----CcCCCCHHHHHHHHHHhcCCCcEEEeecccchHHHcCCCcccEEEeeCCcceeecCCCccCccccHHHHHHhhccC
Confidence                356777777788889999999999999999999999999999999999999999999  99999988887777777


Q ss_pred             CCCCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccc
Q psy11832        159 VIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSL  235 (494)
Q Consensus       159 ~~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~  235 (494)
                      .+|+||.|||.|||+||||||++|...++.+.+++++||++||||||++|+|+++|+.+++   .+...|+||.+++
T Consensus       184 ~~P~C~~Cgg~lrP~VV~FGE~lp~~~~~~a~~~~~~aDlllviGTSl~V~P~a~l~~~~~---~~~~~v~IN~~~t  257 (323)
T 1j8f_A          184 VTPKCEDCQSLVKPDIVFFGESLPARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISKAP---LSTPRLLINKEKA  257 (323)
T ss_dssp             CCCBCTTTCCBEEEEECCBTSCCCHHHHHHHHHGGGSCSEEEEESSCSCSHHHHHHHTTSC---TTCCEEEEESSCC
T ss_pred             CCCCCcCCCCccCCCEEecCCcCCHHHHHHHHHHHhCCCEEEEEeeCcccHHHHHHHHHHH---cCCcEEEEeCCCC
Confidence            8999999999999999999999999999999999999999999999999999999999872   2344566664433

>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*

Probab=100.00  E-value=1.6e-54  Score=435.74  Aligned_cols=201  Identities=47%  Similarity=0.874  Sum_probs=173.4

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+++|+|+++.++++++|++++++++|.+||+.||+|+++++.                          
T Consensus        31 iSt~SGIPdfR~~~~Glw~~~~~~~l~~~e~~~~~~~f~~~p~~f~~~~~~~~~--------------------------   84 (289)
T 1q1a_A           31 ISTSCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYTLAKELYP--------------------------   84 (289)
T ss_dssp             GGGGGTCCCSSSTTTSGGGSCGGGCCSSGGGGGBHHHHHHCCHHHHHHHHHHCS--------------------------
T ss_pred             eeHhhCCCCcCCCCCcccccccccCCCCHHHhcCHHHHhcCHHHHHHHHHHHhh--------------------------
Confidence            689999999999944999998888888899999999999999999999877652                          


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhh---
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFA---  157 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~---  157 (494)
                          .+++||++|++|++|+++|++++||||||||||++||+++++|+|+||+++..+|++|++.|+.++....+..   
T Consensus        85 ----~~a~Pn~~H~~La~L~~~g~~~~viTQNVDgLh~~AG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~~~~~~~  160 (289)
T 1q1a_A           85 ----GNFRPSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPI  160 (289)
T ss_dssp             ----SSCCCCHHHHHHHHHHHTTCEEEEEECCSSCHHHHTTCCGGGEEETTEEEEEEEETTTCCEECHHHHHHHHTCSSC
T ss_pred             ----CcCCCCHHHHHHHHHHhCCCccEEEecCccchHHHcCCCcccEEEecCCcCceEECCCCCCCcHHHHHHHHhhccC
Confidence                3567788888888899999999999999999999999988999999999999999999999988777666633   


Q ss_pred             cCCCCCCCCCCeeeeeEEecCCCCChHHHHHH-------------HhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCC
Q psy11832        158 EVIPTCEKCNGLVKPDIVFFGENLPSRYFHRV-------------DVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK  224 (494)
Q Consensus       158 ~~~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a-------------~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~  224 (494)
                      ..+|+||.|||.|||+||||||.+|...++.+             .+.+.+||++||||||++|+|+++|+..+   ..+
T Consensus       161 ~~~P~C~~Cgg~lrP~vv~FGE~lp~~~~~~~~~~~~~l~~~~~a~~~~~~~DlllviGTSl~V~Pa~~l~~~~---~~~  237 (289)
T 1q1a_A          161 KDFVKCDVCGELVKPAIVFFGEDLPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASLPEEI---PRK  237 (289)
T ss_dssp             CSCCBCTTTCCBEEEEECCBTSBCCHHHHHHHHHHHHHHHHHHHC----CCCCEEEEESCCCCEETTTHHHHHS---CTT
T ss_pred             CCCccCCCCCCEECCCEEEcCCCCCHHHHHHHHHhhhhhhhhhhHHHHhccCCEEEEEccCCChhhHHHHHHHH---hcC
Confidence            36899999999999999999999999865544             34578999999999999999999999887   247


Q ss_pred             ceEEEEeccc
Q psy11832        225 ADLLLIMGTS  234 (494)
Q Consensus       225 a~lv~IN~~p  234 (494)
                      +++|+||.+|
T Consensus       238 ~~~v~IN~~~  247 (289)
T 1q1a_A          238 VKRVLCNLET  247 (289)
T ss_dssp             SEEEEESSSC
T ss_pred             CCEEEEECCC
Confidence            7777777443

>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5

Probab=100.00  E-value=5.7e-54  Score=442.05  Aligned_cols=202  Identities=47%  Similarity=0.846  Sum_probs=162.1

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+++|+|+++.++++++|++++++++|.+||+.||+|+++++                           
T Consensus        39 ISteSGIPdFR~~~~Glw~~~~~~~l~~pe~~~s~~~f~~~P~~f~~~~~~~~---------------------------   91 (361)
T 1q14_A           39 ISTSCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYTLAKELY---------------------------   91 (361)
T ss_dssp             GTGGGC--------------CCCCCCSSGGGGGBHHHHHHCCHHHHHHHTTTS---------------------------
T ss_pred             cchhcCCcccccCcchhhhcccccCCCCHHHhcCHHHHhcCHHHHHHHHHHHh---------------------------
Confidence            78999999999994499999888888889999999999999999999887644                           


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhh---
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFA---  157 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~---  157 (494)
                         +.+++||.+|++|++|+++|++++||||||||||++||+++++|+|+||+++.++|+.|++.|+.+++...+..   
T Consensus        92 ---~~~a~Pn~~H~aLa~Le~~g~~~~ViTQNVDgLh~rAG~~~~~VielHGsl~~~~C~~C~~~~~~~~~~~~~~~~~~  168 (361)
T 1q14_A           92 ---PGNFRPSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPI  168 (361)
T ss_dssp             ---CCCCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCGGGEEETTEEEEEEEETTTCCEECTHHHHHHTTSSSC
T ss_pred             ---hCcCCCCHHHHHHHHHHhcCCCcEEEecccchhHhHcCCCcceEEeccccccccCcCCCCccCcHHHHHHHHhhccc
Confidence               23567888888888899999999999999999999999988999999999999999999999988777665533   


Q ss_pred             cCCCCCCCCCCeeeeeEEecCCCCChHHHHHHHh-------------HcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCC
Q psy11832        158 EVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDV-------------DFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK  224 (494)
Q Consensus       158 ~~~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~-------------~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~  224 (494)
                      ..+|+||.|||.|||+||||||.+|...++.+.+             .+.+||++||||||+.|+|+++|+..+   ..+
T Consensus       169 ~~~P~Cp~Cgg~lrP~VV~FGE~lp~~~~~~~~~a~~~l~~~i~~~~~~~~aDllLviGTSl~V~Paa~l~~~~---~~g  245 (361)
T 1q14_A          169 KDFVKCDVCGELVKPAIVFFGEDLPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASLPEEI---PRK  245 (361)
T ss_dssp             SCCCBCTTTCCBEEEEECCBTSCCCHHHHHHHHHHHHHHHHC--------CCCEEEEESCCCCSTTGGGHHHHS---CTT
T ss_pred             CCCCCCcCCCCEeCCCcccccccCCHHHHHHHHHHHHhhhhcchhhhhhccCCEEEEECCCCCchhHHHHHHHH---hcC
Confidence            2479999999999999999999999988776665             578999999999999999999999987   247


Q ss_pred             ceEEEEecccc
Q psy11832        225 ADLLLIMGTSL  235 (494)
Q Consensus       225 a~lv~IN~~p~  235 (494)
                      +.+|+||.+|+
T Consensus       246 ~~~v~IN~~~t  256 (361)
T 1q14_A          246 VKRVLCNLETV  256 (361)
T ss_dssp             SEEEEESSSCC
T ss_pred             CeEEEEeCCCc
Confidence            77888885444

>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.2e-53  Score=444.96  Aligned_cols=187  Identities=41%  Similarity=0.770  Sum_probs=168.8

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+ +|+|+++.++++.+|++++++++|.+||+.||++++..+.                          
T Consensus       195 ISTeSGIPDFRs~-~GLw~~~~~~gl~~Pe~v~s~~~F~~dP~~Fy~~~r~~~~--------------------------  247 (492)
T 4iao_A          195 VSTSLGIPDFRSS-EGFYSKIKHLGLDDPQDVFNYNIFMHDPSVFYNIANMVLP--------------------------  247 (492)
T ss_dssp             GGGGGTCCCSSST-TSHHHHHHTSCCSCGGGGGBHHHHHHCHHHHHHHGGGGCC--------------------------
T ss_pred             cccccCCccccCc-hHHHHhhhhcCCCCHHHhcCHHHHhhChHHHHHHHHHhhC--------------------------
Confidence            7899999999999 6999998888888899999999999999999998765442                          


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCC
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI  160 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~  160 (494)
                          ..++||++|++|++|+++|++.+||||||||||++||+++++|+|+||++++.+|..|++.++.+++.+.+....+
T Consensus       248 ----~~~~Pn~aH~aLa~Le~~G~l~~VITQNIDgLHqrAG~~s~~ViELHGsl~~~~C~~Cg~~~~~e~i~~~i~~~~~  323 (492)
T 4iao_A          248 ----PEKIYSPLHSFIKMLQMKGKLLRNYTQNIDNLESYAGISTDKLVQCHGSFATATCVTCHWNLPGERIFNKIRNLEL  323 (492)
T ss_dssp             ----CSSCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCTTTEEETTCCTTEEEETTTCCEEEGGGGHHHHHTTCC
T ss_pred             ----CcCCCCHHHHHHHHHHHCCCCceeEeccccchHhhcCCChhhEEeecCccceeecCCCCCcCCHHHHHHHHhccCC
Confidence                3456777788888899999999999999999999999999999999999999999999999887766666656667


Q ss_pred             CCCCCCC-----------------------------------CeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcC
Q psy11832        161 PTCEKCN-----------------------------------GLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTS  205 (494)
Q Consensus       161 P~C~~Cg-----------------------------------g~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTS  205 (494)
                      |+|+.|+                                   |.|||+||||||++|...++.+.+++++||++||||||
T Consensus       324 P~Cp~Cg~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~c~~cgG~LRPdIVfFGE~LP~~~~~~a~~~~~~aDLlLVIGTS  403 (492)
T 4iao_A          324 PLCPYCYKKRREYFPEGYNNKVGVAASQGSMSERPPYILNSYGVLKPDITFFGEALPNKFHKSIREDILECDLLICIGTS  403 (492)
T ss_dssp             CBCTTTHHHHHHHSTTCCCCC--------CCTTCCTTCCTTTTBEEESSCCBTSBCCHHHHHHHHHHTTTCSEEEEESCC
T ss_pred             CCCcccccccccccccccccccccccccccccccccccccCCCcCCCCEEECCCCCCHHHHHHHHHHHhhCCEEEEeccC
Confidence            8887774                                   99999999999999999999999999999999999999


Q ss_pred             CChhhhhhhhhhh
Q psy11832        206 LVVQPFCSLVDKV  218 (494)
Q Consensus       206 l~V~pa~~lv~~~  218 (494)
                      |+|+|+++|+..+
T Consensus       404 L~VyPaA~Lv~~a  416 (492)
T 4iao_A          404 LKVAPVSEIVNMV  416 (492)
T ss_dssp             CCEETGGGHHHHS
T ss_pred             CCccchhhHHHHH
Confidence            9999999999876

>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*

Probab=100.00  E-value=7e-52  Score=407.63  Aligned_cols=203  Identities=34%  Similarity=0.599  Sum_probs=173.3

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+ +|+|+++      ++ +++++++|.+||+.||+|+++++.                          
T Consensus        24 iS~~SGIpdfR~~-~Glw~~~------~~-~~~~~~~f~~~p~~~~~~~~~~~~--------------------------   69 (246)
T 1yc5_A           24 ISTPSGIPDFRGP-NGIYKKY------SQ-NVFDIDFFYSHPEEFYRFAKEGIF--------------------------   69 (246)
T ss_dssp             GTGGGTCCCC------------------C-CTTBHHHHHHCHHHHHHHHHHHTG--------------------------
T ss_pred             eehhhCCCCccCC-CcccccC------CC-ceecHHHHhhCHHHHHHHHHHHHH--------------------------
Confidence            7899999999999 5999864      36 899999999999999999987642                          


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCC
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI  160 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~  160 (494)
                        .+.+++||++|++|++|+++|+.++||||||||||++||+  ++|+|+||+++..+|+.|++.|+.+++...+....+
T Consensus        70 --~~~~~~Pn~~H~~La~L~~~g~~~~viTQNvD~Lh~~AG~--~~v~elHG~~~~~~C~~C~~~~~~~~~~~~~~~~~~  145 (246)
T 1yc5_A           70 --PMLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGS--KKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDV  145 (246)
T ss_dssp             --GGGGCCCCHHHHHHHHHHHTTSCSEEEECCCSCHHHHTTC--SCEEETTEEEEEEEETTTCCEEEHHHHHHHTTTCSS
T ss_pred             --HhccCCCCHHHHHHHHHHhcCCCceEEeccccchHhHcCC--CcEEEecCccceeEcCCCCCCCcHHHHHHHhccCCC
Confidence              2346899999999999999999999999999999999996  899999999999999999999988776665555578


Q ss_pred             CCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccccc
Q psy11832        161 PTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPF  240 (494)
Q Consensus       161 P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~~  240 (494)
                      |+||.|||.|||+||||||++|+..++.+.+++++||++||||||++|+|+++++..+  ..+++++|+||.+|+.....
T Consensus       146 p~C~~Cgg~lrP~vv~FgE~lp~~~~~~a~~~~~~adl~lviGTSl~V~P~~~l~~~a--~~~g~~~i~IN~~~~~~d~~  223 (246)
T 1yc5_A          146 PLCDDCNSLIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLIT--VRSGGKLVIVNLGETPFDDI  223 (246)
T ss_dssp             CBCTTTCCBEEEEECCBTSBCCHHHHHHHHHHHHHCSEEEEESCCSCEETGGGHHHHH--HHHTCEEEEECSSCCTTGGG
T ss_pred             CCCCCCCCccCcceEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCcchhHHHHHHHH--HHcCCeEEEEeCCCCCCCcc
Confidence            9999999999999999999999999999999999999999999999999999999887  35689999999999987655


Q ss_pred             ccc
Q psy11832        241 CSL  243 (494)
Q Consensus       241 a~l  243 (494)
                      +.+
T Consensus       224 ~~~  226 (246)
T 1yc5_A          224 ATL  226 (246)
T ss_dssp             CSE
T ss_pred             eeE
Confidence            543

>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*

Probab=100.00  E-value=2.5e-51  Score=405.23  Aligned_cols=203  Identities=30%  Similarity=0.559  Sum_probs=172.2

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+ +|+|+++      +|++++++++|.+||+.||+|+++++.                          
T Consensus        26 iS~~SGIPdfR~~-~Glw~~~------~~~~~~~~~~f~~~p~~~~~f~~~~~~--------------------------   72 (253)
T 1ma3_A           26 ISAESGIPTFRGE-DGLWRKY------DPEEVASISGFKRNPRAFWEFSMEMKD--------------------------   72 (253)
T ss_dssp             GSCC-----------CCSCSS------CHHHHTBHHHHTTCHHHHHHHHHHTHH--------------------------
T ss_pred             hhHhhCCCCcCCC-CcccccC------ChhheecHHHHhcCHHHHHHHHHHHHH--------------------------
Confidence            6899999999999 5999864      489999999999999999999876531                          


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCC
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI  160 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~  160 (494)
                        .+. ++||++|++|++|+++|+.++||||||||||++||+  ++|+|+||+++..+|+.|++.|+.++....+....+
T Consensus        73 --~~~-~~Pn~~H~~La~L~~~g~~~~viTQNvD~Lh~~AG~--~~v~elHG~~~~~~C~~C~~~~~~~~~~~~~~~~~~  147 (253)
T 1ma3_A           73 --KLF-AEPNPAHYAIAELERMGIVKAVITQNIDMLHQRAGS--RRVLELHGSMDKLDCLDCHETYDWSEFVEDFNKGEI  147 (253)
T ss_dssp             --HHT-CCCCHHHHHHHHHHHTTSEEEEEESCCSCHHHHHTC--CSEEETTEEEEEEEETTTCCEEEGGGTHHHHHTTCC
T ss_pred             --hcc-CCCCHHHHHHHHHHhcCCCeEEEeccccccHhHhCC--CCEEEeCCCcCeeeeCCCCCcCcHHHHHHHhccCCC
Confidence              123 889999999999999999999999999999999996  899999999999999999999887766655555578


Q ss_pred             CCCCCCCC-eeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccccccc
Q psy11832        161 PTCEKCNG-LVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQP  239 (494)
Q Consensus       161 P~C~~Cgg-~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~  239 (494)
                      |+||.||| .|||+||||||++|...++.+.+++++||++||||||++|+|+++|+..+  ..+++++|+||.+|+....
T Consensus       148 p~C~~Cgg~~lrP~Vv~FgE~lp~~~~~~a~~~~~~adl~lviGTSl~V~P~~~l~~~a--~~~g~~~i~iN~~~~~~d~  225 (253)
T 1ma3_A          148 PRCRKCGSYYVKPRVVLFGEPLPQRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIA--KKAGAKMIIVNAEPTMADP  225 (253)
T ss_dssp             CCCTTTCCSCEEEEECCBTSBCCHHHHHHHHHHHHHCSEEEEESCCSCEETGGGHHHHH--HHHTCEEEEEESSCCTTGG
T ss_pred             CCCCCCCCccccceEEEeCCCCCHHHHHHHHHHHHhCCEEEEECCCceeccHHHHHHHH--HHcCCeEEEEeCCCCCCCC
Confidence            99999999 99999999999999999999999999999999999999999999999887  4568999999999998765


Q ss_pred             cccc
Q psy11832        240 FCSL  243 (494)
Q Consensus       240 ~a~l  243 (494)
                      .+.+
T Consensus       226 ~~~~  229 (253)
T 1ma3_A          226 IFDV  229 (253)
T ss_dssp             GCSE
T ss_pred             ceeE
Confidence            5443

>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*

Probab=100.00  E-value=1.2e-51  Score=406.70  Aligned_cols=202  Identities=27%  Similarity=0.460  Sum_probs=178.8

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+ +|+|+++      ++++++++++|.+||+.||+|+++++.                          
T Consensus        23 iS~~SGIPdfR~~-~Glw~~~------~~~~~~~~~~f~~~p~~~w~~~~~~~~--------------------------   69 (249)
T 1m2k_A           23 VSAESGIPTFRGK-DGLWNRY------RPEELANPQAFAKDPEKVWKWYAWRME--------------------------   69 (249)
T ss_dssp             GGGGGTCCCSSST-TCHHHHS------CHHHHSSHHHHHHCHHHHHHHHHHHHH--------------------------
T ss_pred             hhhhhCCCCccCC-CcCccCC------CHHhcccHHHHhcCHHHHHHHHHHHHH--------------------------
Confidence            6899999999999 5999874      489999999999999999999876531                          


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCC
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI  160 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~  160 (494)
                        ...+++||++|++|++|+++|+.++||||||||||++||.  ++|+|+||+++..+|+.|++.|+.++.   +....+
T Consensus        70 --~~~~~~Pn~~H~~La~L~~~g~~~~viTQNiDgLh~~AG~--~~v~elHG~~~~~~C~~C~~~~~~~~~---~~~~~~  142 (249)
T 1m2k_A           70 --KVFNAQPNKAHQAFAELERLGVLKCLITQNVDDLHERAGS--RNVIHLHGSLRVVRCTSCNNSFEVESA---PKIPPL  142 (249)
T ss_dssp             --HHHHCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTC--CSEEETTEEEEEEEESSSSCEEECSSC---CCSSSC
T ss_pred             --HhCcCCCCHHHHHHHHHHhCCCCcEEEECCccchhhhcCC--CcEEEecCCcceeEeCCCCCcccchhh---ccCCCC
Confidence              1235799999999999999999999999999999999995  899999999999999999998765432   223358


Q ss_pred             CCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccccc
Q psy11832        161 PTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPF  240 (494)
Q Consensus       161 P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~~  240 (494)
                      |+||.|||.+||+||||||++|+..++.+.+++++||++||||||++|+|+++|+..+  ..+++++|+||.+|+.....
T Consensus       143 p~C~~Cgg~lrP~Vv~FgE~lp~~~~~~a~~~~~~adlllviGTSl~V~P~~~l~~~a--~~~g~~~i~IN~~~~~~d~~  220 (249)
T 1m2k_A          143 PKCDKCGSLLRPGVVWAGEMLPPDVLDRAMREVERADVIIVAGTSAVVQPAASLPLIV--KQRGGAIIEINPDETPLTPI  220 (249)
T ss_dssp             CBCSSSSSBEEEEECCTTSCCCHHHHHHHHHHHHHCSEEEEESCCSCSTTGGGHHHHH--HHTTCEEEEECSSCCTTGGG
T ss_pred             CCCCCCCCCcCCeEEecCCCCCHHHHHHHHHHHhcCCEEEEEccCCCccchHHHHHHH--HHcCCeEEEEeCCCCCCCcc
Confidence            9999999999999999999999999999999999999999999999999999999887  46799999999999987665


Q ss_pred             cccc
Q psy11832        241 CSLV  244 (494)
Q Consensus       241 a~l~  244 (494)
                      +.+.
T Consensus       221 ~~~~  224 (249)
T 1m2k_A          221 ADYS  224 (249)
T ss_dssp             CSEE
T ss_pred             eeEE
Confidence            5443

>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*

Probab=100.00  E-value=6.3e-51  Score=408.31  Aligned_cols=197  Identities=24%  Similarity=0.413  Sum_probs=174.5

Q ss_pred             CcccCCCCCccC-CCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhh
Q psy11832          1 MFGAAGIPDFRS-PGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHF   79 (494)
Q Consensus         1 ~~~~SGIPdFRg-~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~   79 (494)
                      |||+|||||||| + +|+|+++      +|++++++.+|.+||+.||+|+++++.                         
T Consensus        56 iSt~SGIPdFR~~~-~Glw~~~------~p~~~~~~~~f~~~p~~~w~~~~~~~~-------------------------  103 (290)
T 3u31_A           56 TSAESNIPSFRGSS-NSIWSKY------DPRIYGTIWGFWKYPEKIWEVIRDISS-------------------------  103 (290)
T ss_dssp             GTGGGTCCSCTTCT-TSGGGGS------CHHHHTBHHHHHHCHHHHHHHHHHHHH-------------------------
T ss_pred             cccccCCccccccc-cchhhcC------CHHHhhCHHhhhhCHHHHHHHHHHHhh-------------------------
Confidence            689999999999 6 6999875      488999999999999999999876431                         


Q ss_pred             cccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHH----HHH
Q psy11832         80 TQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMK----ERI  155 (494)
Q Consensus        80 ~~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~----~~i  155 (494)
                          ..+++||++|++|++|+++|++++||||||||||++||+  ++|+|+||+++..+|..|++.|+.+...    ..+
T Consensus       104 ----~~~a~Pn~~H~aLa~Le~~g~~~~viTQNVDgLh~rAG~--~~vielHGs~~~~~C~~C~~~~~~~~~~~~~~~~~  177 (290)
T 3u31_A          104 ----DYEIEINNGHVALSTLESLGYLKSVVTQNVDGLHEASGN--TKVISLHGNVFEAVCCTCNKIVKLNKIMLQKTSHF  177 (290)
T ss_dssp             ----HSCCCCCHHHHHHHHHHHTTCEEEEEESCCSCHHHHTTC--SCEEETTEEEEEEEETTTCCEEECCTGGGSTTSST
T ss_pred             ----hccCCCCHHHHHHHHHHHcCCCceEEEechHHHHHHcCC--CcEEEecCCcCcceeCCCCCcCChhHhhhcccccc
Confidence                146789999999999999999999999999999999996  7999999999999999999988754322    112


Q ss_pred             hhcCCCCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccc
Q psy11832        156 FAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSL  235 (494)
Q Consensus       156 ~~~~~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~  235 (494)
                      ....+|+|| |||.+||+||||||++|...++.|.+++++||++||||||++|+|+++|+..+  ..+++++|+||.+|+
T Consensus       178 ~~~~~P~C~-Cgg~lrPdVV~FGE~lp~~~~~~a~~~~~~aDllLviGTSl~V~Paa~l~~~a--~~~g~~~v~IN~~~t  254 (290)
T 3u31_A          178 MHQLPPECP-CGGIFKPNIILFGEVVSSDLLKEAEEEIAKCDLLLVIGTSSTVSTATNLCHFA--CKKKKKIVEINISKT  254 (290)
T ss_dssp             TTSSSCBCT-TSCBEEEEECCBTSBCCHHHHHHHHHHHHHCSEEEEESCCSCSHHHHHHHHHH--HHTTCCEEEEESSCC
T ss_pred             cccCCCCCC-CCCEECCeEEEcCCCCCHHHHHHHHHHHhcCCEEEEECcCCcchhHHHHHHHH--HHcCCEEEEECCCCC
Confidence            234589999 99999999999999999999999999999999999999999999999999987  467899999999999


Q ss_pred             ccc
Q psy11832        236 VVQ  238 (494)
Q Consensus       236 ~~h  238 (494)
                      ...
T Consensus       255 ~~~  257 (290)
T 3u31_A          255 YIT  257 (290)
T ss_dssp             TTT
T ss_pred             CCC
Confidence            864

>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.9e-50  Score=414.04  Aligned_cols=202  Identities=39%  Similarity=0.717  Sum_probs=181.5

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+ +|+|+++.++++.+|++++++++|.+||+.||+|++..+.                          
T Consensus        57 ISt~SGIPdFR~~-~Glw~~~~~~~l~~p~~~~~~~~F~~~P~~f~~~~~~~~~--------------------------  109 (354)
T 2hjh_A           57 VSTSLGIPDFRSS-EGFYSKIKHLGLDDPQDVFNYNIFMHDPSVFYNIANMVLP--------------------------  109 (354)
T ss_dssp             GGGGGTCCCSSST-TSHHHHTGGGCCSSGGGGGBHHHHHHCTHHHHHHGGGGCC--------------------------
T ss_pred             hhHhhCCCcccCc-chHHHHHHhhcCCCHHHhCCHHHHhcCHHHHHHHHHHHcc--------------------------
Confidence            6899999999999 6999998888887899999999999999999998755432                          


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCC
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI  160 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~  160 (494)
                          ..++||++|++|++|+++|++++||||||||||++||+++++|+|+|||++..+|++|+..|+.+.+.+.+....+
T Consensus       110 ----~~~~Pn~~H~aLa~Le~~g~l~~viTQNVDgLh~rAG~~~~~vielHGsl~~~~C~~C~~~~~~~~~~~~~~~~~~  185 (354)
T 2hjh_A          110 ----PEKIYSPLHSFIKMLQMKGKLLRNYTQNIDNLESYAGISTDKLVQCHGSFATATCVTCHWNLPGERIFNKIRNLEL  185 (354)
T ss_dssp             ----CCSCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCTTTEEETTEEEEEEEETTTCCEEEGGGGHHHHHTTCC
T ss_pred             ----ccCCCCHHHHHHHHHHHcCCceEEEecccCcHHHHcCCCccCEEEecCCcCccccCCCCCcCCHHHHHHHhhccCC
Confidence                2456788888888899999999999999999999999998999999999999999999998887766666655578


Q ss_pred             CCCCCC-----------------------------------CCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcC
Q psy11832        161 PTCEKC-----------------------------------NGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTS  205 (494)
Q Consensus       161 P~C~~C-----------------------------------gg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTS  205 (494)
                      |+||.|                                   +|.+||+||||||++|...++.+.+++++||++||||||
T Consensus       186 P~Cp~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~lrPdVV~FGE~lp~~~~~~a~~~~~~aDllLviGTS  265 (354)
T 2hjh_A          186 PLCPYCYKKRREYFPEGYNNKVGVAASQGSMSERPPYILNSYGVLKPDITFFGEALPNKFHKSIREDILECDLLICIGTS  265 (354)
T ss_dssp             CBCTTTHHHHHHHCCC-----------------CCTTSCTTTTBEEEEECCBTSBCCHHHHHHHHHHTTTCCEEEEESCC
T ss_pred             CcCccccccccccccccccccccccccccccccccccccccCCeeCCChhhccccCCHHHHHHHHHHHhhCCEEEEECcC
Confidence            888877                                   489999999999999999999999999999999999999


Q ss_pred             CChhhhhhhhhhhhhcCCCceEEEEeccccc
Q psy11832        206 LVVQPFCSLVDKVDVDFPKADLLLIMGTSLV  236 (494)
Q Consensus       206 l~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~  236 (494)
                      |+|+|+++|+..+   ..++.+|+||.+|+.
T Consensus       266 L~V~Paa~lv~~~---~~~~~~v~IN~~~t~  293 (354)
T 2hjh_A          266 LKVAPVSEIVNMV---PSHVPQVLINRDPVK  293 (354)
T ss_dssp             CCEETGGGHHHHS---CTTSCEEEEESSCCT
T ss_pred             CCchhHHHHHHHH---hcCCcEEEEcCCCCC
Confidence            9999999999887   347889999999986

>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A*

Probab=100.00  E-value=1.6e-50  Score=403.37  Aligned_cols=208  Identities=26%  Similarity=0.405  Sum_probs=175.6

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+ +|+|+++.      +++++++++|.+||+.||.||....                           
T Consensus        32 iSt~SGIPdFR~~-~Glw~~~~------~~~l~~~~~f~~~p~~~w~fy~~~~---------------------------   77 (273)
T 3riy_A           32 VSAESGVPTFRGA-GGYWRKWQ------AQDLATPLAFAHNPSRVWEFYHYRR---------------------------   77 (273)
T ss_dssp             GTGGGTCCCSSSG-GGEETTEE------HHHHSSHHHHHHCHHHHHHHHHHHH---------------------------
T ss_pred             cchhhCCCccccc-cchhhhCC------hhhcCCHHHHhhCHHHHHHHHHHHH---------------------------
Confidence            7899999999999 69998763      7889999999999999999875431                           


Q ss_pred             ccccCCCCCChhHHHHHHHHh----cCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHH-----
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQ----KNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWM-----  151 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~----~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~-----  151 (494)
                       ..+.+++||++|++|++|++    +|++++||||||||||++||+  ++|+|+||++++.+|++|++.|+....     
T Consensus        78 -~~~~~~~Pn~~H~~La~Le~~~~~~g~~~~viTQNiDgLh~~AG~--~~vielHG~~~~~~C~~C~~~~~~~~~p~~~~  154 (273)
T 3riy_A           78 -EVMGSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGT--KNLLEIHGSLFKTRCTSCGVVAENYKSPICPA  154 (273)
T ss_dssp             -HHHTTCCCCHHHHHHHHHHHHHHTTTCEEEEEESCCSCHHHHHTC--CSEEETTEEEEEEEETTTCCEEECCCSSSSGG
T ss_pred             -HHhhhCCCCHHHHHHHHHHHhhhhcCceeEEEEecccchHhhcCC--CCEEEecCcCCeeEcCCCCCcccccccchhhh
Confidence             01236788888888888884    589999999999999999996  799999999999999999998642210     


Q ss_pred             -H-----------HHHhhcCCCCC--CCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhh
Q psy11832        152 -K-----------ERIFAEVIPTC--EKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDK  217 (494)
Q Consensus       152 -~-----------~~i~~~~~P~C--~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~  217 (494)
                       .           ..+....+|+|  |.|||.|||+||||||++|+..++.|.+++++||++||||||++|+|+++|+..
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~P~C~~~~Cgg~lrP~VV~FGE~lp~~~~~~a~~~~~~aDl~lviGTSl~V~Paa~l~~~  234 (273)
T 3riy_A          155 LSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQ  234 (273)
T ss_dssp             GTTCCCCSTTCCCCCCCGGGSCBCCGGGCCCBEEEEECCTTSBCCHHHHHHHHHHHHHCSEEEEESCCSCEETGGGHHHH
T ss_pred             hhcccCCcccccccccccCCCCCCCCCCCCCeeCCcEEEeCCcCCHHHHHHHHHHHhcCCEEEEEeeCCcchhHHHhHHH
Confidence             0           01223458999  789999999999999999999999999999999999999999999999999987


Q ss_pred             hhhcCCCceEEEEecccccccccccccccc
Q psy11832        218 VDVDFPKADLLLIMGTSLVVQPFCSLVDKT  247 (494)
Q Consensus       218 ~~~~~~~a~lv~IN~~p~~~h~~a~l~~~~  247 (494)
                      +  ..+++++|+||.+|+.....+.+.-.+
T Consensus       235 a--~~~g~~~v~IN~~~t~~d~~~~~~i~g  262 (273)
T 3riy_A          235 V--AARGVPVAEFNTETTPATNRFRFHFQG  262 (273)
T ss_dssp             H--HHTTCCEEEEESSCCTTGGGSSEEEES
T ss_pred             H--HHCCCEEEEECCCCCCCCcceeEEEeC
Confidence            6  357999999999999987766554333

>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5

Probab=100.00  E-value=1.2e-49  Score=389.28  Aligned_cols=201  Identities=21%  Similarity=0.298  Sum_probs=164.6

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+ +|+|+++      ++++++++++|.+||+.||.||.....                          
T Consensus        12 iS~~SGIPdfR~~-~Glw~~~------~~~~~~~~~~f~~~p~~~~~f~~~~~~--------------------------   58 (235)
T 1s5p_A           12 ISAESGIRTFRAA-DGLWEEH------RVEDVATPEGFDRDPELVQAFYNARRR--------------------------   58 (235)
T ss_dssp             HHHTTTCCCCCSS-SCEETTE------EHHHHSSHHHHHHCHHHHHHHHHHHHH--------------------------
T ss_pred             hhhhhCCCCCCCC-CCCccCC------CHhHcccHHHHhhCHHHHHHHHHHHHH--------------------------
Confidence            6899999999999 6999875      389999999999999999998865320                          


Q ss_pred             cccc-CCCCCChhHHHHHHHHh-cCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhc
Q psy11832         81 QVYW-GSFKPTPCHYFLKLLHQ-KNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAE  158 (494)
Q Consensus        81 ~~~~-~~~~Pn~~H~~La~L~~-~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~  158 (494)
                       .++ .+++||++|++|++|++ .|+.++||||||||||++||  +++|+|+||+++..+|++|++.|+.+.   .+...
T Consensus        59 -~~~~~~a~Pn~~H~~La~L~~~~g~~~~viTQNvD~Lh~~AG--~~~v~elHG~~~~~~C~~C~~~~~~~~---~~~~~  132 (235)
T 1s5p_A           59 -QLQQPEIQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAG--NTNVIHMHGELLKVRCSQSGQVLDWTG---DVTPE  132 (235)
T ss_dssp             -HHTSTTCCCCHHHHHHHHHHHHHGGGEEEEESCCSSHHHHHT--CCSCEETTEEEEEEEETTTCCEEECCS---CCCSS
T ss_pred             -HhhhcCCCCCHHHHHHHHHHHhhCCceEEEeccccchhhhcC--CCcEEEecCCceEEEeCCCCCcccchh---hccCC
Confidence             011 35889999999999999 69999999999999999999  589999999999999999999876543   13344


Q ss_pred             CCCCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccc
Q psy11832        159 VIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQ  238 (494)
Q Consensus       159 ~~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h  238 (494)
                      .+|+|+.|||.|||+||||||+ |. .++++.+++++||++||||||++|+|+++|+..+  ...++++|+||.+|+...
T Consensus       133 ~~p~c~~Cgg~lrP~vv~FGE~-p~-~~~~a~~~~~~adl~lviGTSl~V~Pa~~l~~~a--~~~g~~~i~iN~~~t~~~  208 (235)
T 1s5p_A          133 DKCHCCQFPAPLRPHVVWFGEM-PL-GMDEIYMALSMADIFIAIGTSGHVYPAAGFVHEA--KLHGAHTVELNLEPSQVG  208 (235)
T ss_dssp             CCC-------CEEEEECCTTSC-CS-SHHHHHHHHHHCSEEEEESCCTTEETGGGHHHHH--HHTTCEEEEEESSSCC--
T ss_pred             CCCCCCCCCCeecCcEEEeCCC-HH-HHHHHHHHHhcCCEEEEECcCCchhhHHHHHHHH--HHcCCeEEEEECCCCCCC
Confidence            6899999999999999999999 74 6899999999999999999999999999999988  345899999999999876


Q ss_pred             cccccc
Q psy11832        239 PFCSLV  244 (494)
Q Consensus       239 ~~a~l~  244 (494)
                      ..+.+.
T Consensus       209 ~~~~~~  214 (235)
T 1s5p_A          209 NEFAEK  214 (235)
T ss_dssp             -CCSEE
T ss_pred             ccccEE
Confidence            655443

>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.3e-44  Score=364.93  Aligned_cols=161  Identities=26%  Similarity=0.373  Sum_probs=136.0

Q ss_pred             CCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHh-hcCCCCC
Q psy11832         85 GSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIF-AEVIPTC  163 (494)
Q Consensus        85 ~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~-~~~~P~C  163 (494)
                      .+++||.+|++|++|+++|++++||||||||||++||+++++|+|+|||+++.+|+.|++.|+.+.+..... ....|.|
T Consensus        87 ~~a~Pn~~H~aLa~Le~~g~~~~viTQNIDgLh~rAG~~~~~VielHGsl~~~~C~~C~~~~~~~~~~~~~~~~p~~~~C  166 (318)
T 3k35_A           87 ESARPTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGLKATGRLC  166 (318)
T ss_dssp             TTCCCCHHHHHHHHHHHTTCCCEEEECCCSCHHHHBTCCGGGEEETTCCTTEEEETTTCCEEECSSCCSCCSSCEEEEEC
T ss_pred             hhCCCCHHHHHHHHHHHcCCceEEEEecccchHhhcCCCccCEEEeCCCCCeeEeCCCCCccchHHhhhhcccCCCCCcC
Confidence            467888888999999999999999999999999999998899999999999999999999876543221110 0112355


Q ss_pred             --------CCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccc
Q psy11832        164 --------EKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSL  235 (494)
Q Consensus       164 --------~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~  235 (494)
                              +.|||.|||+||||||++|...++.|.+++++||++|||||||+|+|+++|+..+  ...++++|+||.+|+
T Consensus       167 ~~~~~~~c~~CgG~LRPdVV~FGE~lP~~~~~~a~~~~~~aDllLViGTSL~V~Paa~l~~~a--~~~G~~vviIN~~~t  244 (318)
T 3k35_A          167 TVAKARGLRACRGELRDTILDWEDSLPDRDLALADEASRNADLSITLGTSLQIRPSGNLPLAT--KRRGGRLVIVNLQPT  244 (318)
T ss_dssp             CC--------CCCEEEECCCCTTCCCCHHHHHHHHHHHHTCSEEEEESCCCCSTTGGGHHHHH--HHTTCEEEEECSSCC
T ss_pred             cccccccccCcCCeeCCCEEEccCcCCHHHHHHHHHHHhcCCEEEEEccCCCchhhhhhHHHH--HhcCCEEEEECCCCC
Confidence                    5799999999999999999999999999999999999999999999999999887  467899999999999


Q ss_pred             cccccccccccc
Q psy11832        236 VVQPFCSLVDKT  247 (494)
Q Consensus       236 ~~h~~a~l~~~~  247 (494)
                      .....+.+.-.+
T Consensus       245 ~~d~~adl~i~g  256 (318)
T 3k35_A          245 KHDRHADLRIHG  256 (318)
T ss_dssp             TTGGGCSEEECS
T ss_pred             CCCCcccEEEeC
Confidence            887766654433

>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A*

Probab=100.00  E-value=3.3e-44  Score=364.75  Aligned_cols=161  Identities=26%  Similarity=0.373  Sum_probs=136.7

Q ss_pred             CCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHh-hcCCCCC
Q psy11832         85 GSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIF-AEVIPTC  163 (494)
Q Consensus        85 ~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~-~~~~P~C  163 (494)
                      .+++||.+|++|++|+++|++++||||||||||++||+++++|+|+||+++..+|+.|++.|..+.+...+. ....|.|
T Consensus        87 ~~a~Pn~~H~aLa~Le~~g~l~~viTQNIDgLh~rAG~~~~~VieLHGsl~~~~C~~C~~~~~~~~~~~~~~~~~~~~~C  166 (355)
T 3pki_A           87 ESARPTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGLKATGRLC  166 (355)
T ss_dssp             TTCCCCHHHHHHHHHHHTTCCSEEEECCCSCHHHHEEEEGGGEEETTCCTTEEEETTTCCEEEBSSCCSCCSSCEEEEEC
T ss_pred             hhCCCCHHHHHHHHHHHcCCCcEEEEecccchHhhcCCCcccEEEeCCCCCceeeCCCCCccchHHhhhhcccCCCCCcc
Confidence            467888889999999999999999999999999999998889999999999999999999876543221110 0112345


Q ss_pred             --------CCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccc
Q psy11832        164 --------EKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSL  235 (494)
Q Consensus       164 --------~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~  235 (494)
                              +.|||.|||+||||||++|...++.|.+++++||++|||||||+|+|+++|+..+  ...++++|+||.+|+
T Consensus       167 ~~~~~~~~~~CgG~LRPdVV~FGE~lP~~~~~~A~~~~~~aDllLViGTSL~V~Paa~Lp~~a--~~~G~~vviIN~~pT  244 (355)
T 3pki_A          167 TVAKARGLRACRGELRDTILDWEDSLPDRDLALADEASRNADLSITLGTSLQIRPSGNLPLAT--KRRGGRLVIVNLQPT  244 (355)
T ss_dssp             CCCCBTTBCCCCCEEEECCCCTTSCCCHHHHHHHHHHHHHCSEEEEESCCCCSTTGGGTTHHH--HHTTCEEEEECSSCC
T ss_pred             ccccccccccCCCccCCCEEECCCcCCHHHHHHHHHHHhcCCEEEEEeeCCCchhhhhhHHHH--HhcCCEEEEECCCCC
Confidence                    5899999999999999999999999999999999999999999999999999887  457889999999999


Q ss_pred             cccccccccccc
Q psy11832        236 VVQPFCSLVDKT  247 (494)
Q Consensus       236 ~~h~~a~l~~~~  247 (494)
                      .....+.+.-.+
T Consensus       245 ~~d~~adl~i~g  256 (355)
T 3pki_A          245 KHDRHADLRIHG  256 (355)
T ss_dssp             TTGGGCSEEECS
T ss_pred             CCCCccCEEEeC
Confidence            877666554333

>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*

Probab=100.00  E-value=2.4e-36  Score=301.60  Aligned_cols=183  Identities=26%  Similarity=0.345  Sum_probs=149.5

Q ss_pred             ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832        231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG  309 (494)
Q Consensus       231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c  309 (494)
                      +.+|+..|... .|+++|++.+||||||||||++||+++++|+|+|||+++.+|++|++.|+.++++..+...  .+|.|
T Consensus        89 ~a~Pn~~H~~La~Le~~g~l~~viTQNIDgLh~rAG~~~~~VielHGs~~~~~C~~C~~~~~~~~~~~~i~~~--~~P~C  166 (285)
T 3glr_A           89 NYKPNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMAD--RVPRC  166 (285)
T ss_dssp             SCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCGGGEEETTEEEEEEEETTTCCEEEGGGGHHHHHTT--CCCBC
T ss_pred             cCCCCHHHHHHHHHHHcCCCceEEeeeecchHhhcCCCcccEEEecCCCCeEEECCCCCcCCHHHHHHHhhcC--CCCCC
Confidence            45788888765 6888899999999999999999999999999999999999999999999998887766543  35889


Q ss_pred             CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhcccCCCCCCCCCCcccEEEeCC
Q psy11832        310 LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLEGD  387 (494)
Q Consensus       310 ~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~~g~~~~~~~~~~dl~i~g~  387 (494)
                      +.|+|   ++||+|||  |++|..+. .+.+++++||++|||||||+|   +|+++|+....       ....-      
T Consensus       167 ~~Cgg---~lrP~IV~FGE~lp~~~~-~~~~~~~~aDlllviGTSl~V---~Paa~l~~~~~-------~~~~~------  226 (285)
T 3glr_A          167 PVCTG---VVKPDIVFFGEPLPQRFL-LHVVDFPMADLLLILGTSLEV---EPFASLTEAVR-------SSVPR------  226 (285)
T ss_dssp             TTTCC---BEEEEECCTTSBCCGGGG-GHHHHHHHCSEEEEESCCCCE---ETTGGGGGSSC-------TTSCE------
T ss_pred             CCCCC---ccCCcEEEeCCcCCHHHH-HHHHHHhcCCEEEEeCCCCcc---ccHHHHHHHHh-------CCCcE------
Confidence            99998   58899988  56777666 446677899999999999999   99999985321       01111      


Q ss_pred             hhHHHHHHHHHhCCCchHHHhhcCccccCCCCCCCccceEEeCCcHHHHHHHHHHcCCchhhhhhhc
Q psy11832        388 CDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLG  454 (494)
Q Consensus       388 ~~~~~~~L~~~lg~~~~~~~l~~~~~~~~f~~~~~~~Dv~~lgdcD~~~~~l~~~lgW~~el~~l~~  454 (494)
                                         .++|+++...|...++.+|++++||||+++.+|+++|||++||++|+.
T Consensus       227 -------------------v~IN~~~~~~~~~~~~~~d~~~~g~~~~~~~~L~~~lgw~~el~~~~~  274 (285)
T 3glr_A          227 -------------------LLINRDLVGPLAWHPRSRDVAQLGDVVHGVESLVELLGWTEEMRDLVQ  274 (285)
T ss_dssp             -------------------EEEESSCCTHHHHSCCTTEEEEESCHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred             -------------------EEECCCCcCccccCCCCccEEEcCCHHHHHHHHHHHhCCHHHHHHHHH
Confidence                               134555544444345779999999999999999999999999999985

>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5

Probab=100.00  E-value=1.8e-34  Score=293.66  Aligned_cols=195  Identities=32%  Similarity=0.506  Sum_probs=148.3

Q ss_pred             ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCC--CCCccchHHHHhhhccCCCCCC
Q psy11832        231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLT--CRKDYSVAWMKEGNLLGRMGIT  307 (494)
Q Consensus       231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~--C~~~y~~~~~~~~i~~~~~~~p  307 (494)
                      +.+|+..|... .|+++|++.+||||||||||++||+++++|+|+|||+++.+|++  |++.|+.+++.+.+...  ..|
T Consensus       109 ~a~Pn~~H~aLa~L~~~g~~~~viTQNIDgLh~~AG~~~~~VielHGs~~~~~C~~~~C~~~~~~~~~~~~i~~~--~~P  186 (323)
T 1j8f_A          109 QFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSE--VTP  186 (323)
T ss_dssp             SCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCGGGEEETTEEEEEEEESCTTTCCEECHHHHHHHHHTT--CCC
T ss_pred             cCCCCHHHHHHHHHHhcCCCcEEEeecccchHHHcCCCcccEEEeeCCcceeecCCCccCccccHHHHHHhhccC--CCC
Confidence            45777777655 67888999999999999999999999999999999999999999  99999999887766544  358


Q ss_pred             ccCCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhcccCCCCCCCCCCcccEEEe
Q psy11832        308 LGLHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLE  385 (494)
Q Consensus       308 ~c~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~~g~~~~~~~~~~dl~i~  385 (494)
                      .|+.|+|   ++||+|||  |++|..++..+.+.+++||++||+||||+|   +|++.++..+..       ...-+   
T Consensus       187 ~C~~Cgg---~lrP~VV~FGE~lp~~~~~~a~~~~~~aDlllviGTSl~V---~P~a~l~~~~~~-------~~~~v---  250 (323)
T 1j8f_A          187 KCEDCQS---LVKPDIVFFGESLPARFFSCMQSDFLKVDLLLVMGTSLQV---QPFASLISKAPL-------STPRL---  250 (323)
T ss_dssp             BCTTTCC---BEEEEECCBTSCCCHHHHHHHHHGGGSCSEEEEESSCSCS---HHHHHHHTTSCT-------TCCEE---
T ss_pred             CCcCCCC---ccCCCEEecCCcCCHHHHHHHHHHHhCCCEEEEEeeCccc---HHHHHHHHHHHc-------CCcEE---
Confidence            8999998   58888888  667888888888888999999999999999   999999854310       01111   


Q ss_pred             CChhHHHHHHHHHhCCCchHHHhhcCccccCCCCCCCccceEEeCCcHHHHHHHHHHcCCchhhhhhhcccCCCCCcccc
Q psy11832        386 GDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNEN  465 (494)
Q Consensus       386 g~~~~~~~~L~~~lg~~~~~~~l~~~~~~~~f~~~~~~~Dv~~lgdcD~~~~~l~~~lgW~~el~~l~~~~~~~~~~~~~  465 (494)
                                            ++|.++...       .+        .+.             .-++..+++++|+..+
T Consensus       251 ----------------------~IN~~~t~~-------~~--------~~~-------------~~~~~~~~~~~~~~~~  280 (323)
T 1j8f_A          251 ----------------------LINKEKAGQ-------SD--------PFL-------------GMIMGLGGGMDFDSKK  280 (323)
T ss_dssp             ----------------------EEESSCCCC-------CC--------HHH-------------HHHHHHHTCCCSSSTT
T ss_pred             ----------------------EEeCCCCCC-------Cc--------ccc-------------cccccccccccccccc
Confidence                                  223222111       00        000             1123456677888777


Q ss_pred             ccccceeccccchhHHHHHHHhccCccc
Q psy11832        466 NVRDVFLEGDCDSGCQKLADMLGWGKDI  493 (494)
Q Consensus       466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (494)
                      +.+|+.+.|||+.+..+|++.|||..|+
T Consensus       281 ~~~d~~i~gd~~~~l~~L~~~lgw~~~l  308 (323)
T 1j8f_A          281 AYRDVAWLGECDQGCLALAELLGWKKEL  308 (323)
T ss_dssp             CCSEEEEESCHHHHHHHHHHHTTCHHHH
T ss_pred             cceeEEEeCCHHHHHHHHHHHcCCchHH
Confidence            7888888888888888888888887664

>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.5e-32  Score=282.88  Aligned_cols=182  Identities=24%  Similarity=0.254  Sum_probs=142.8

Q ss_pred             eccccccccc-ccccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832        231 MGTSLVVQPF-CSLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG  309 (494)
Q Consensus       231 N~~p~~~h~~-a~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c  309 (494)
                      +..|+..|.. +.|+++|++.+||||||||||++||+++++|+|+|||+++.+|++|++.|+.+.+.+.+...  .+|.|
T Consensus       111 ~~~Pn~~H~aLa~Le~~g~l~~viTQNVDgLh~rAG~~~~~vielHGsl~~~~C~~C~~~~~~~~~~~~~~~~--~~P~C  188 (354)
T 2hjh_A          111 EKIYSPLHSFIKMLQMKGKLLRNYTQNIDNLESYAGISTDKLVQCHGSFATATCVTCHWNLPGERIFNKIRNL--ELPLC  188 (354)
T ss_dssp             CSCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCTTTEEETTEEEEEEEETTTCCEEEGGGGHHHHHTT--CCCBC
T ss_pred             cCCCCHHHHHHHHHHHcCCceEEEecccCcHHHHcCCCccCEEEecCCcCccccCCCCCcCCHHHHHHHhhcc--CCCcC
Confidence            3467777755 47888899999999999999999999999999999999999999999999988877665332  35777


Q ss_pred             CCCC--------------------------------CCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEecccccc
Q psy11832        310 LHAG--------------------------------GLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGV  355 (494)
Q Consensus       310 ~~C~--------------------------------g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V  355 (494)
                      +.|+                                .|.+++||+|||  |++|..++..+.+.+.+||++|||||||+|
T Consensus       189 p~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~lrPdVV~FGE~lp~~~~~~a~~~~~~aDllLviGTSL~V  268 (354)
T 2hjh_A          189 PYCYKKRREYFPEGYNNKVGVAASQGSMSERPPYILNSYGVLKPDITFFGEALPNKFHKSIREDILECDLLICIGTSLKV  268 (354)
T ss_dssp             TTTHHHHHHHCCC-----------------CCTTSCTTTTBEEEEECCBTSBCCHHHHHHHHHHTTTCCEEEEESCCCCE
T ss_pred             ccccccccccccccccccccccccccccccccccccccCCeeCCChhhccccCCHHHHHHHHHHHhhCCEEEEECcCCCc
Confidence            7774                                123578999998  567878888888999999999999999999


Q ss_pred             CCCCcchhhhcccCCCCCCCCCCcccEEEeCChhHHHHHHHHHhCCCchHHHhhcCccccCCCCCCCccceEEeCCcHHH
Q psy11832        356 GSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSG  435 (494)
Q Consensus       356 ~~~~P~a~l~~~~~g~~~~~~~~~~dl~i~g~~~~~~~~L~~~lg~~~~~~~l~~~~~~~~f~~~~~~~Dv~~lgdcD~~  435 (494)
                         +|++.++..+.       .. +.+                        .++|.++...     ...|+.+.||||++
T Consensus       269 ---~Paa~lv~~~~-------~~-~~~------------------------v~IN~~~t~~-----~~~dl~i~g~~~~v  308 (354)
T 2hjh_A          269 ---APVSEIVNMVP-------SH-VPQ------------------------VLINRDPVKH-----AEFDLSLLGYCDDI  308 (354)
T ss_dssp             ---ETGGGHHHHSC-------TT-SCE------------------------EEEESSCCTT-----SCCSEEEESCHHHH
T ss_pred             ---hhHHHHHHHHh-------cC-CcE------------------------EEEcCCCCCC-----CCcCEEEeCCHHHH
Confidence               99998875331       00 111                        2345544321     23899999999999


Q ss_pred             HHHHHHHcCCch---hhhhhhc
Q psy11832        436 CQKLADMLGWGI---PLMGLLG  454 (494)
Q Consensus       436 ~~~l~~~lgW~~---el~~l~~  454 (494)
                      +.+|++.|||+.   ++++|..
T Consensus       309 l~~L~~~lgw~~p~~~~~~~~~  330 (354)
T 2hjh_A          309 AAMVAQKCGWTIPHKKWNDLKN  330 (354)
T ss_dssp             HHHHHHHHTCCCCSTTHHHHHT
T ss_pred             HHHHHHHcCCCCchHHHHHhhc
Confidence            999999999995   4455543

>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae}

Probab=99.97  E-value=9.7e-32  Score=282.37  Aligned_cols=178  Identities=25%  Similarity=0.285  Sum_probs=142.2

Q ss_pred             ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832        231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG  309 (494)
Q Consensus       231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c  309 (494)
                      +..|+..|... .|+++|++.+||||||||||++||+++++|+|+|||+++.+|++|+++|+.+++.+.+....  +|.|
T Consensus       249 ~~~Pn~aH~aLa~Le~~G~l~~VITQNIDgLHqrAG~~s~~ViELHGsl~~~~C~~Cg~~~~~e~i~~~i~~~~--~P~C  326 (492)
T 4iao_A          249 EKIYSPLHSFIKMLQMKGKLLRNYTQNIDNLESYAGISTDKLVQCHGSFATATCVTCHWNLPGERIFNKIRNLE--LPLC  326 (492)
T ss_dssp             SSCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCTTTEEETTCCTTEEEETTTCCEEEGGGGHHHHHTTC--CCBC
T ss_pred             cCCCCHHHHHHHHHHHCCCCceeEeccccchHhhcCCChhhEEeecCccceeecCCCCCcCCHHHHHHHHhccC--CCCC
Confidence            35677777765 68889999999999999999999999999999999999999999999999888776654433  4667


Q ss_pred             CCCC--------------------------------CCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEecccccc
Q psy11832        310 LHAG--------------------------------GLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGV  355 (494)
Q Consensus       310 ~~C~--------------------------------g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V  355 (494)
                      +.|+                                .|.+++||+|||  |++|..++..+.+++++||+||||||||+|
T Consensus       327 p~Cg~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~c~~cgG~LRPdIVfFGE~LP~~~~~~a~~~~~~aDLlLVIGTSL~V  406 (492)
T 4iao_A          327 PYCYKKRREYFPEGYNNKVGVAASQGSMSERPPYILNSYGVLKPDITFFGEALPNKFHKSIREDILECDLLICIGTSLKV  406 (492)
T ss_dssp             TTTHHHHHHHSTTCCCCC--------CCTTCCTTCCTTTTBEEESSCCBTSBCCHHHHHHHHHHTTTCSEEEEESCCCCE
T ss_pred             cccccccccccccccccccccccccccccccccccccCCCcCCCCEEECCCCCCHHHHHHHHHHHhhCCEEEEeccCCCc
Confidence            7774                                233578898888  677888888888999999999999999999


Q ss_pred             CCCCcchhhhcccCCCCCCCCCCcccEEEeCChhHHHHHHHHHhCCCchHHHhhcCccccCCCCCCCccceEEeCCcHHH
Q psy11832        356 GSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSG  435 (494)
Q Consensus       356 ~~~~P~a~l~~~~~g~~~~~~~~~~dl~i~g~~~~~~~~L~~~lg~~~~~~~l~~~~~~~~f~~~~~~~Dv~~lgdcD~~  435 (494)
                         +|+++|+..+.+       ...                         ..++|+++...     ...|+.++|+||++
T Consensus       407 ---yPaA~Lv~~a~~-------~~p-------------------------~ViIN~ept~~-----~~~Dl~l~G~cdev  446 (492)
T 4iao_A          407 ---APVSEIVNMVPS-------HVP-------------------------QVLINRDPVKH-----AEFDLSLLGYCDDI  446 (492)
T ss_dssp             ---ETGGGHHHHSBT-------TSC-------------------------EEEEESSCCTT-----SCCSEEEESCHHHH
T ss_pred             ---cchhhHHHHHhc-------CCc-------------------------EEEEcCCCCCC-----CCccEEEeCCHHHH
Confidence               999998754310       001                         12455554332     23799999999999


Q ss_pred             HHHHHHHcCCchhhh
Q psy11832        436 CQKLADMLGWGIPLM  450 (494)
Q Consensus       436 ~~~l~~~lgW~~el~  450 (494)
                      +.+||++|||+..-+
T Consensus       447 v~~L~~~LGw~ip~~  461 (492)
T 4iao_A          447 AAMVAQKCGWTIPHK  461 (492)
T ss_dssp             HHHHHHHTTCCCCST
T ss_pred             HHHHHHHhCCCCChH
Confidence            999999999996433

>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}

Probab=99.97  E-value=6e-32  Score=272.57  Aligned_cols=166  Identities=20%  Similarity=0.177  Sum_probs=132.0

Q ss_pred             cccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc-
Q psy11832        232 GTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG-  309 (494)
Q Consensus       232 ~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c-  309 (494)
                      .+|+..|... +|+++|++.+||||||||||++||.++++|+|+|||+++.+|++|++.|+.+.+...+.. ....+.| 
T Consensus        89 a~Pn~~H~aLa~Le~~g~~~~viTQNIDgLh~rAG~~~~~VielHGsl~~~~C~~C~~~~~~~~~~~~~~~-~p~~~~C~  167 (318)
T 3k35_A           89 ARPTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGL-KATGRLCT  167 (318)
T ss_dssp             CCCCHHHHHHHHHHHTTCCCEEEECCCSCHHHHBTCCGGGEEETTCCTTEEEETTTCCEEECSSCCSCCSS-CEEEEECC
T ss_pred             CCCCHHHHHHHHHHHcCCceEEEEecccchHhhcCCCccCEEEeCCCCCeeEeCCCCCccchHHhhhhccc-CCCCCcCc
Confidence            4677777654 788889999999999999999999888999999999999999999999987654322110 0001234 


Q ss_pred             -------CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhccc--CCC-------
Q psy11832        310 -------LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLS--EGL-------  371 (494)
Q Consensus       310 -------~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~--~g~-------  371 (494)
                             +.|+|   ++||+|||  |++|..++..+.+.+++||++||+||||+|   +|+++|+..+  .|.       
T Consensus       168 ~~~~~~c~~CgG---~LRPdVV~FGE~lP~~~~~~a~~~~~~aDllLViGTSL~V---~Paa~l~~~a~~~G~~vviIN~  241 (318)
T 3k35_A          168 VAKARGLRACRG---ELRDTILDWEDSLPDRDLALADEASRNADLSITLGTSLQI---RPSGNLPLATKRRGGRLVIVNL  241 (318)
T ss_dssp             C--------CCC---EEEECCCCTTCCCCHHHHHHHHHHHHTCSEEEEESCCCCS---TTGGGHHHHHHHTTCEEEEECS
T ss_pred             ccccccccCcCC---eeCCCEEEccCcCCHHHHHHHHHHHhcCCEEEEEccCCCc---hhhhhhHHHHHhcCCEEEEECC
Confidence                   45666   68888887  678888889999999999999999999999   9999997543  233       


Q ss_pred             CCCCCCCcccEEEeCChhHHHHHHHHHhCCCch
Q psy11832        372 GFDNENNVRDVFLEGDCDSGCQKLADMLGWGIP  404 (494)
Q Consensus       372 ~~~~~~~~~dl~i~g~~~~~~~~L~~~lg~~~~  404 (494)
                      +.+..++.+|++|+|++++++++|++.|||.-+
T Consensus       242 ~~t~~d~~adl~i~g~~~evl~~L~~~Lg~~iP  274 (318)
T 3k35_A          242 QPTKHDRHADLRIHGYVDEVMTRLMKHLGLEIP  274 (318)
T ss_dssp             SCCTTGGGCSEEECSCHHHHHHHHHHHHTCCCC
T ss_pred             CCCCCCCcccEEEeCCHHHHHHHHHHHhCCCCC
Confidence            345556789999999999999999999998644

>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*

Probab=99.97  E-value=1.3e-31  Score=263.36  Aligned_cols=161  Identities=18%  Similarity=0.205  Sum_probs=134.6

Q ss_pred             ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832        231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG  309 (494)
Q Consensus       231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c  309 (494)
                      +.+|+..|... +|+++|++.+||||||||||++||  +++|+|+|||+++.+|+.|++.|+.+++.+.+..+  ..|.|
T Consensus        73 ~~~Pn~~H~~La~L~~~g~~~~viTQNvD~Lh~~AG--~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~~~~~--~~p~C  148 (246)
T 1yc5_A           73 QAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAG--SKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESS--DVPLC  148 (246)
T ss_dssp             GCCCCHHHHHHHHHHHTTSCSEEEECCCSCHHHHTT--CSCEEETTEEEEEEEETTTCCEEEHHHHHHHTTTC--SSCBC
T ss_pred             cCCCCHHHHHHHHHHhcCCCceEEeccccchHhHcC--CCcEEEecCccceeEcCCCCCCCcHHHHHHHhccC--CCCCC
Confidence            45777887655 688889999999999999999999  69999999999999999999999998877654322  46889


Q ss_pred             CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhcccC--CC-------CCCCCCC
Q psy11832        310 LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSE--GL-------GFDNENN  378 (494)
Q Consensus       310 ~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~~--g~-------~~~~~~~  378 (494)
                      +.|+|   ++||+|||  |++|...+..+.+.+++||++||+||||+|   +|++.++..+.  |.       +.+..+.
T Consensus       149 ~~Cgg---~lrP~vv~FgE~lp~~~~~~a~~~~~~adl~lviGTSl~V---~P~~~l~~~a~~~g~~~i~IN~~~~~~d~  222 (246)
T 1yc5_A          149 DDCNS---LIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVV---YPAAELPLITVRSGGKLVIVNLGETPFDD  222 (246)
T ss_dssp             TTTCC---BEEEEECCBTSBCCHHHHHHHHHHHHHCSEEEEESCCSCE---ETGGGHHHHHHHHTCEEEEECSSCCTTGG
T ss_pred             CCCCC---ccCcceEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCcc---hhHHHHHHHHHHcCCeEEEEeCCCCCCCc
Confidence            99998   57888888  667887888888888899999999999999   99998865442  33       2333456


Q ss_pred             cccEEEeCChhHHHHHHHHHhCC
Q psy11832        379 VRDVFLEGDCDSGCQKLADMLGW  401 (494)
Q Consensus       379 ~~dl~i~g~~~~~~~~L~~~lg~  401 (494)
                      .+|+.|.|++++++++|++.||+
T Consensus       223 ~~~~~i~~~~~~~l~~l~~~lg~  245 (246)
T 1yc5_A          223 IATLKYNMDVVEFARRVMEEGGI  245 (246)
T ss_dssp             GCSEEECSCHHHHHHHHHHHHTC
T ss_pred             ceeEEEeCCHHHHHHHHHHHcCC
Confidence            78999999999999999999984

>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A*

Probab=99.96  E-value=1.1e-31  Score=272.94  Aligned_cols=166  Identities=20%  Similarity=0.181  Sum_probs=132.6

Q ss_pred             cccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc-
Q psy11832        232 GTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG-  309 (494)
Q Consensus       232 ~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c-  309 (494)
                      .+|+..|... +|+++|++.+||||||||||++||+++++|+|+|||+++.+|++|++.|+.+.+...+.. ....+.| 
T Consensus        89 a~Pn~~H~aLa~Le~~g~l~~viTQNIDgLh~rAG~~~~~VieLHGsl~~~~C~~C~~~~~~~~~~~~~~~-~~~~~~C~  167 (355)
T 3pki_A           89 ARPTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGL-KATGRLCT  167 (355)
T ss_dssp             CCCCHHHHHHHHHHHTTCCSEEEECCCSCHHHHEEEEGGGEEETTCCTTEEEETTTCCEEEBSSCCSCCSS-CEEEEECC
T ss_pred             CCCCHHHHHHHHHHHcCCCcEEEEecccchHhhcCCCcccEEEeCCCCCceeeCCCCCccchHHhhhhccc-CCCCCccc
Confidence            4677777654 788889999999999999999999888899999999999999999999987654332110 0001223 


Q ss_pred             -------CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhccc--CCC-------
Q psy11832        310 -------LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLS--EGL-------  371 (494)
Q Consensus       310 -------~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~--~g~-------  371 (494)
                             +.|+|   ++||+|||  |++|..++..+.+.+++||+||||||||+|   +|+++|+..+  .|.       
T Consensus       168 ~~~~~~~~~CgG---~LRPdVV~FGE~lP~~~~~~A~~~~~~aDllLViGTSL~V---~Paa~Lp~~a~~~G~~vviIN~  241 (355)
T 3pki_A          168 VAKARGLRACRG---ELRDTILDWEDSLPDRDLALADEASRNADLSITLGTSLQI---RPSGNLPLATKRRGGRLVIVNL  241 (355)
T ss_dssp             CCCBTTBCCCCC---EEEECCCCTTSCCCHHHHHHHHHHHHHCSEEEEESCCCCS---TTGGGTTHHHHHTTCEEEEECS
T ss_pred             cccccccccCCC---ccCCCEEECCCcCCHHHHHHHHHHHhcCCEEEEEeeCCCc---hhhhhhHHHHHhcCCEEEEECC
Confidence                   45666   68888887  678888888888889999999999999999   9999997553  233       


Q ss_pred             CCCCCCCcccEEEeCChhHHHHHHHHHhCCCch
Q psy11832        372 GFDNENNVRDVFLEGDCDSGCQKLADMLGWGIP  404 (494)
Q Consensus       372 ~~~~~~~~~dl~i~g~~~~~~~~L~~~lg~~~~  404 (494)
                      +.+..+..+|++|.|++++++++|++.|||.-+
T Consensus       242 ~pT~~d~~adl~i~g~a~evl~~L~~~Lg~~iP  274 (355)
T 3pki_A          242 QPTKHDRHADLRIHGYVDEVMTRLMEHLGLEIP  274 (355)
T ss_dssp             SCCTTGGGCSEEECSCHHHHHHHHHHHTTCCCC
T ss_pred             CCCCCCCccCEEEeCCHHHHHHHHHHHhCCCCC
Confidence            344556789999999999999999999998643

>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*

Probab=99.96  E-value=1.8e-30  Score=256.15  Aligned_cols=158  Identities=20%  Similarity=0.244  Sum_probs=130.4

Q ss_pred             cccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCccC
Q psy11832        232 GTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGL  310 (494)
Q Consensus       232 ~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c~  310 (494)
                      .+|+..|... +|+++|++.+||||||||||++||  +++|+|+|||+++.+|+.|++.|+.+++.+.+...  ..|.|+
T Consensus        76 ~~Pn~~H~~La~L~~~g~~~~viTQNvD~Lh~~AG--~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~~~~~--~~p~C~  151 (253)
T 1ma3_A           76 AEPNPAHYAIAELERMGIVKAVITQNIDMLHQRAG--SRRVLELHGSMDKLDCLDCHETYDWSEFVEDFNKG--EIPRCR  151 (253)
T ss_dssp             CCCCHHHHHHHHHHHTTSEEEEEESCCSCHHHHHT--CCSEEETTEEEEEEEETTTCCEEEGGGTHHHHHTT--CCCCCT
T ss_pred             CCCCHHHHHHHHHHhcCCCeEEEeccccccHhHhC--CCCEEEeCCCcCeeeeCCCCCcCcHHHHHHHhccC--CCCCCC
Confidence            4677777655 688889999999999999999999  69999999999999999999999988776554332  358899


Q ss_pred             CCCC-CCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhcccC--CC-------CCCCCCC
Q psy11832        311 HAGG-LSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSE--GL-------GFDNENN  378 (494)
Q Consensus       311 ~C~g-~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~~--g~-------~~~~~~~  378 (494)
                      .|+| .   +||+|||  |++|...+..+.+.+++||++||+||||+|   +|++.|+..+.  |.       +.+..+.
T Consensus       152 ~Cgg~~---lrP~Vv~FgE~lp~~~~~~a~~~~~~adl~lviGTSl~V---~P~~~l~~~a~~~g~~~i~iN~~~~~~d~  225 (253)
T 1ma3_A          152 KCGSYY---VKPRVVLFGEPLPQRTLFEAIEEAKHCDAFMVVGSSLVV---YPAAELPYIAKKAGAKMIIVNAEPTMADP  225 (253)
T ss_dssp             TTCCSC---EEEEECCBTSBCCHHHHHHHHHHHHHCSEEEEESCCSCE---ETGGGHHHHHHHHTCEEEEEESSCCTTGG
T ss_pred             CCCCcc---ccceEEEeCCCCCHHHHHHHHHHHHhCCEEEEECCCcee---ccHHHHHHHHHHcCCeEEEEeCCCCCCCC
Confidence            9988 5   6788887  667887888888888899999999999999   99998865432  33       2333456


Q ss_pred             cccEEEeCChhHHHHHHHHHh
Q psy11832        379 VRDVFLEGDCDSGCQKLADML  399 (494)
Q Consensus       379 ~~dl~i~g~~~~~~~~L~~~l  399 (494)
                      .+|+.|.|++++++++|++.+
T Consensus       226 ~~~~~i~~~~~~~l~~l~~~l  246 (253)
T 1ma3_A          226 IFDVKIIGKAGEVLPKIVEEV  246 (253)
T ss_dssp             GCSEEEESCHHHHHHHHHHHH
T ss_pred             ceeEEEeCCHHHHHHHHHHHH
Confidence            789999999999999998765

>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*

Probab=99.96  E-value=3.1e-30  Score=253.92  Aligned_cols=157  Identities=15%  Similarity=0.178  Sum_probs=128.4

Q ss_pred             ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832        231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG  309 (494)
Q Consensus       231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c  309 (494)
                      +.+|+..|... +|+++|++.+||||||||||++||  +++|+|+|||+++.+|+.|++.|+.++.   +..  ...|.|
T Consensus        73 ~~~Pn~~H~~La~L~~~g~~~~viTQNiDgLh~~AG--~~~v~elHG~~~~~~C~~C~~~~~~~~~---~~~--~~~p~C  145 (249)
T 1m2k_A           73 NAQPNKAHQAFAELERLGVLKCLITQNVDDLHERAG--SRNVIHLHGSLRVVRCTSCNNSFEVESA---PKI--PPLPKC  145 (249)
T ss_dssp             HCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTT--CCSEEETTEEEEEEEESSSSCEEECSSC---CCS--SSCCBC
T ss_pred             cCCCCHHHHHHHHHHhCCCCcEEEECCccchhhhcC--CCcEEEecCCcceeEeCCCCCcccchhh---ccC--CCCCCC
Confidence            45677777654 688889999999999999999999  7999999999999999999999877653   211  135889


Q ss_pred             CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhccc--CCC-------CCCCCCC
Q psy11832        310 LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLS--EGL-------GFDNENN  378 (494)
Q Consensus       310 ~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~--~g~-------~~~~~~~  378 (494)
                      +.|+|   ++||+|||  |++|...+..+.+.+++||++||+||||+|   +|++.|+..+  .|.       +.+..+.
T Consensus       146 ~~Cgg---~lrP~Vv~FgE~lp~~~~~~a~~~~~~adlllviGTSl~V---~P~~~l~~~a~~~g~~~i~IN~~~~~~d~  219 (249)
T 1m2k_A          146 DKCGS---LLRPGVVWAGEMLPPDVLDRAMREVERADVIIVAGTSAVV---QPAASLPLIVKQRGGAIIEINPDETPLTP  219 (249)
T ss_dssp             SSSSS---BEEEEECCTTSCCCHHHHHHHHHHHHHCSEEEEESCCSCS---TTGGGHHHHHHHTTCEEEEECSSCCTTGG
T ss_pred             CCCCC---CcCCeEEecCCCCCHHHHHHHHHHHhcCCEEEEEccCCCc---cchHHHHHHHHHcCCeEEEEeCCCCCCCc
Confidence            99998   58888888  677888888888888899999999999999   9999886543  233       2333356


Q ss_pred             cccEEEeCChhHHHHHHHHHhC
Q psy11832        379 VRDVFLEGDCDSGCQKLADMLG  400 (494)
Q Consensus       379 ~~dl~i~g~~~~~~~~L~~~lg  400 (494)
                      .+|+.|.|++++++++|++.+.
T Consensus       220 ~~~~~i~~~~~~~l~~l~~~l~  241 (249)
T 1m2k_A          220 IADYSLRGKAGEVMDELVRHVR  241 (249)
T ss_dssp             GCSEEECSCHHHHHHHHHHHHH
T ss_pred             ceeEEEeCCHHHHHHHHHHHHH
Confidence            7899999999999999987653

>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*

Probab=99.96  E-value=7.4e-30  Score=256.36  Aligned_cols=186  Identities=24%  Similarity=0.297  Sum_probs=141.5

Q ss_pred             ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccC-CCCCCc
Q psy11832        231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLG-RMGITL  308 (494)
Q Consensus       231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~-~~~~p~  308 (494)
                      +.+|+..|... +|+++|++.+||||||||||++||+++++|+|+|||+++.+|++|++.|+.+.+...+... ...+|.
T Consensus        86 ~a~Pn~~H~~La~L~~~g~~~~viTQNVDgLh~~AG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~P~  165 (289)
T 1q1a_A           86 NFRPSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPIKDFVK  165 (289)
T ss_dssp             SCCCCHHHHHHHHHHHTTCEEEEEECCSSCHHHHTTCCGGGEEETTEEEEEEEETTTCCEECHHHHHHHHTCSSCCSCCB
T ss_pred             cCCCCHHHHHHHHHHhCCCccEEEecCccchHHHcCCCcccEEEecCCcCceEECCCCCCCcHHHHHHHHhhccCCCCcc
Confidence            45677777665 6788899999999999999999999889999999999999999999999998877665432 124588


Q ss_pred             cCCCCCCCCCCCCcEEe--ccCChhHHHhh-------------hcCCCCCCeEEEeccccccCCCCcchhhhcccCCCCC
Q psy11832        309 GLHAGGLSSIPGGAEVF--SALCLEFGVHS-------------ASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGF  373 (494)
Q Consensus       309 c~~C~g~~~i~~p~ivf--e~l~~~~~~~~-------------~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~~g~~~  373 (494)
                      |+.|+|   ++||+|||  |++|..+...+             .+...+||++||+|||++|   +|++.|+..+.    
T Consensus       166 C~~Cgg---~lrP~vv~FGE~lp~~~~~~~~~~~~~l~~~~~a~~~~~~~DlllviGTSl~V---~Pa~~l~~~~~----  235 (289)
T 1q1a_A          166 CDVCGE---LVKPAIVFFGEDLPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAV---YPFASLPEEIP----  235 (289)
T ss_dssp             CTTTCC---BEEEEECCBTSBCCHHHHHHHHHHHHHHHHHHHC----CCCCEEEEESCCCCE---ETTTHHHHHSC----
T ss_pred             CCCCCC---EECCCEEEcCCCCCHHHHHHHHHhhhhhhhhhhHHHHhccCCEEEEEccCCCh---hhHHHHHHHHh----
Confidence            999998   57888888  56676654433             3568899999999999999   89998875431    


Q ss_pred             CCCCCcccEEEeCChhHHHHHHHHHhCCCchHHHhhcCccccCCCCCCCccceEEeCCcHHHHHHHHHHcCCchhhhhhh
Q psy11832        374 DNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLL  453 (494)
Q Consensus       374 ~~~~~~~dl~i~g~~~~~~~~L~~~lg~~~~~~~l~~~~~~~~f~~~~~~~Dv~~lgdcD~~~~~l~~~lgW~~el~~l~  453 (494)
                          ..+.++                        ++|.++...|.......|+.+.|||++++.+|++.|||++||++|+
T Consensus       236 ----~~~~~v------------------------~IN~~~~~~~~~~~~~~d~~i~~~~~~~l~~l~~~l~~~~~~~~~~  287 (289)
T 1q1a_A          236 ----RKVKRV------------------------LCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEELGWQEDFEKIL  287 (289)
T ss_dssp             ----TTSEEE------------------------EESSSCCTHHHHSCCTTCEEECCCHHHHHHHHHHHHTCHHHHHHHH
T ss_pred             ----cCCCEE------------------------EEECCCcccCCCCCcceeEEEeCCHHHHHHHHHHHcCCHHHHHHHh
Confidence                011111                        2344332212112345899999999999999999999999999987


Q ss_pred             c
Q psy11832        454 G  454 (494)
Q Consensus       454 ~  454 (494)
                      .
T Consensus       288 ~  288 (289)
T 1q1a_A          288 T  288 (289)
T ss_dssp             T
T ss_pred             h
Confidence            4

>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5

Probab=99.95  E-value=5.1e-30  Score=250.29  Aligned_cols=155  Identities=14%  Similarity=-0.007  Sum_probs=117.6

Q ss_pred             cccccccccc-cccc-cccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832        232 GTSLVVQPFC-SLVD-KTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG  309 (494)
Q Consensus       232 ~~p~~~h~~a-~l~~-~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c  309 (494)
                      .+|+..|... +|++ +|++.+||||||||||++||  +++|+|+|||+++.+|++|++.|+.+.   .+.  ..+.|.|
T Consensus        65 a~Pn~~H~~La~L~~~~g~~~~viTQNvD~Lh~~AG--~~~v~elHG~~~~~~C~~C~~~~~~~~---~~~--~~~~p~c  137 (235)
T 1s5p_A           65 IQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAG--NTNVIHMHGELLKVRCSQSGQVLDWTG---DVT--PEDKCHC  137 (235)
T ss_dssp             CCCCHHHHHHHHHHHHHGGGEEEEESCCSSHHHHHT--CCSCEETTEEEEEEEETTTCCEEECCS---CCC--SSCCC--
T ss_pred             CCCCHHHHHHHHHHHhhCCceEEEeccccchhhhcC--CCcEEEecCCceEEEeCCCCCcccchh---hcc--CCCCCCC
Confidence            5677777655 6887 59999999999999999999  899999999999999999999988654   122  2346788


Q ss_pred             CCCCCCCCCCCCcEEeccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhcccC--CC-------CCCCCCCcc
Q psy11832        310 LHAGGLSSIPGGAEVFSALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSE--GL-------GFDNENNVR  380 (494)
Q Consensus       310 ~~C~g~~~i~~p~ivfe~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~~--g~-------~~~~~~~~~  380 (494)
                      +.|+|   ++||+||||++....+..+.+.+++||++||+|||++|   +|++.|+..+.  |.       +.+..+..+
T Consensus       138 ~~Cgg---~lrP~vv~FGE~p~~~~~a~~~~~~adl~lviGTSl~V---~Pa~~l~~~a~~~g~~~i~iN~~~t~~~~~~  211 (235)
T 1s5p_A          138 CQFPA---PLRPHVVWFGEMPLGMDEIYMALSMADIFIAIGTSGHV---YPAAGFVHEAKLHGAHTVELNLEPSQVGNEF  211 (235)
T ss_dssp             --------CEEEEECCTTSCCSSHHHHHHHHHHCSEEEEESCCTTE---ETGGGHHHHHHHTTCEEEEEESSSCC---CC
T ss_pred             CCCCC---eecCcEEEeCCCHHHHHHHHHHHhcCCEEEEECcCCch---hhHHHHHHHHHHcCCeEEEEECCCCCCCccc
Confidence            88988   58899999554334567777888899999999999999   99999876642  33       234445678


Q ss_pred             cEEEeCChhHHHHHHHHHh
Q psy11832        381 DVFLEGDCDSGCQKLADML  399 (494)
Q Consensus       381 dl~i~g~~~~~~~~L~~~l  399 (494)
                      |+.|.|++++++++|++.+
T Consensus       212 ~~~i~~~~~~~l~~l~~~l  230 (235)
T 1s5p_A          212 AEKYYGPASQVVPEFVEKL  230 (235)
T ss_dssp             SEEEESCHHHHHHHHHHHH
T ss_pred             cEEEeCCHHHHHHHHHHHH
Confidence            9999999999999998765

>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5

Probab=99.95  E-value=2.6e-29  Score=258.65  Aligned_cols=189  Identities=24%  Similarity=0.289  Sum_probs=143.5

Q ss_pred             ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCC-CCCCc
Q psy11832        231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGR-MGITL  308 (494)
Q Consensus       231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~-~~~p~  308 (494)
                      +..|+..|... .|+++|++.+||||||||||++||+++++|+|+|||+++.+|++|++.|+.+.+...+.... ..+|.
T Consensus        94 ~a~Pn~~H~aLa~Le~~g~~~~ViTQNVDgLh~rAG~~~~~VielHGsl~~~~C~~C~~~~~~~~~~~~~~~~~~~~~P~  173 (361)
T 1q14_A           94 NFRPSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPIKDFVK  173 (361)
T ss_dssp             CCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCGGGEEETTEEEEEEEETTTCCEECTHHHHHHTTSSSCSCCCB
T ss_pred             cCCCCHHHHHHHHHHhcCCCcEEEecccchhHhHcCCCcceEEeccccccccCcCCCCccCcHHHHHHHHhhcccCCCCC
Confidence            56788887665 67788999999999999999999998899999999999999999999999988776654321 23588


Q ss_pred             cCCCCCCCCCCCCcEEe--ccCChhHHHhhhc-------------CCCCCCeEEEeccccccCCCCcchhhhcccCCCCC
Q psy11832        309 GLHAGGLSSIPGGAEVF--SALCLEFGVHSAS-------------APPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGF  373 (494)
Q Consensus       309 c~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~-------------~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~~g~~~  373 (494)
                      ||.|+|   ++||+|||  |++|...+..+.+             ...+||++||+|||++|   +|++.|+..+.    
T Consensus       174 Cp~Cgg---~lrP~VV~FGE~lp~~~~~~~~~a~~~l~~~i~~~~~~~~aDllLviGTSl~V---~Paa~l~~~~~----  243 (361)
T 1q14_A          174 CDVCGE---LVKPAIVFFGEDLPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAV---YPFASLPEEIP----  243 (361)
T ss_dssp             CTTTCC---BEEEEECCBTSCCCHHHHHHHHHHHHHHHHC--------CCCEEEEESCCCCS---TTGGGHHHHSC----
T ss_pred             CcCCCC---EeCCCcccccccCCHHHHHHHHHHHHhhhhcchhhhhhccCCEEEEECCCCCc---hhHHHHHHHHh----
Confidence            999998   57888888  5677766554443             67899999999999999   99998875431    


Q ss_pred             CCCCCcccEEEeCChhHHHHHHHHHhCCCchHHHhhcCccccCCCCCCCccceEEeCCcHHHHHHHHHHcCCchhhhhhh
Q psy11832        374 DNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLL  453 (494)
Q Consensus       374 ~~~~~~~dl~i~g~~~~~~~~L~~~lg~~~~~~~l~~~~~~~~f~~~~~~~Dv~~lgdcD~~~~~l~~~lgW~~el~~l~  453 (494)
                          ..+.++                        ++|.++...|.......|+.+.|||++++.+|++.|||++||++|+
T Consensus       244 ----~g~~~v------------------------~IN~~~t~~~~~~~~~~d~~i~g~~~evl~~L~~~Lg~~~~l~~~~  295 (361)
T 1q14_A          244 ----RKVKRV------------------------LCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEELGWQEDFEKIL  295 (361)
T ss_dssp             ----TTSEEE------------------------EESSSCCHHHHHTCCTTCEEECSCHHHHHHHHHHHHTCHHHHHHHH
T ss_pred             ----cCCeEE------------------------EEeCCCccccccCcccccEEEeCCHHHHHHHHHHHcCChhHHHHHH
Confidence                011122                        2333332111111245899999999999999999999999999998


Q ss_pred             cccC
Q psy11832        454 GLSE  457 (494)
Q Consensus       454 ~~~~  457 (494)
                      .-+.
T Consensus       296 ~~~~  299 (361)
T 1q14_A          296 TAQG  299 (361)
T ss_dssp             HHC-
T ss_pred             Hhhh
Confidence            6443

>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*

Probab=99.95  E-value=1.4e-29  Score=253.55  Aligned_cols=157  Identities=15%  Similarity=0.170  Sum_probs=123.8

Q ss_pred             eccccccccc-ccccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHh---hhccCCCCC
Q psy11832        231 MGTSLVVQPF-CSLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKE---GNLLGRMGI  306 (494)
Q Consensus       231 N~~p~~~h~~-a~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~---~i~~~~~~~  306 (494)
                      +.+|+..|.. ++|+++|++.+||||||||||++||  +++|+|+|||+++.+|++|++.|+.+....   .... ....
T Consensus       106 ~a~Pn~~H~aLa~Le~~g~~~~viTQNVDgLh~rAG--~~~vielHGs~~~~~C~~C~~~~~~~~~~~~~~~~~~-~~~~  182 (290)
T 3u31_A          106 EIEINNGHVALSTLESLGYLKSVVTQNVDGLHEASG--NTKVISLHGNVFEAVCCTCNKIVKLNKIMLQKTSHFM-HQLP  182 (290)
T ss_dssp             CCCCCHHHHHHHHHHHTTCEEEEEESCCSCHHHHTT--CSCEEETTEEEEEEEETTTCCEEECCTGGGSTTSSTT-TSSS
T ss_pred             cCCCCHHHHHHHHHHHcCCCceEEEechHHHHHHcC--CCcEEEecCCcCcceeCCCCCcCChhHhhhccccccc-ccCC
Confidence            4578887765 4788889999999999999999999  689999999999999999999998765431   1111 1235


Q ss_pred             CccCCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhccc--CCC-------CCCC
Q psy11832        307 TLGLHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLS--EGL-------GFDN  375 (494)
Q Consensus       307 p~c~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~--~g~-------~~~~  375 (494)
                      |.|+ |+|   ++||+|||  |++|..++..+.+.+++||++||+||||+|   +|++.|+..+  .|.       +.+.
T Consensus       183 P~C~-Cgg---~lrPdVV~FGE~lp~~~~~~a~~~~~~aDllLviGTSl~V---~Paa~l~~~a~~~g~~~v~IN~~~t~  255 (290)
T 3u31_A          183 PECP-CGG---IFKPNIILFGEVVSSDLLKEAEEEIAKCDLLLVIGTSSTV---STATNLCHFACKKKKKIVEINISKTY  255 (290)
T ss_dssp             CBCT-TSC---BEEEEECCBTSBCCHHHHHHHHHHHHHCSEEEEESCCSCS---HHHHHHHHHHHHTTCCEEEEESSCCT
T ss_pred             CCCC-CCC---EECCeEEEcCCCCCHHHHHHHHHHHhcCCEEEEECcCCcc---hhHHHHHHHHHHcCCEEEEECCCCCC
Confidence            7888 988   58888888  677888888888888899999999999999   9999998663  233       2233


Q ss_pred             C-CCcccEEEeCChhHHHHHHHHH
Q psy11832        376 E-NNVRDVFLEGDCDSGCQKLADM  398 (494)
Q Consensus       376 ~-~~~~dl~i~g~~~~~~~~L~~~  398 (494)
                      . +..+|++|.|+++++++ |++.
T Consensus       256 ~~~~~~d~~i~g~a~~vl~-~~~~  278 (290)
T 3u31_A          256 ITNKMSDYHVCAKFSELTK-VANI  278 (290)
T ss_dssp             TTTTTCSEEEESCGGGHHH-HHHH
T ss_pred             CCCccceEEEECCHHHHHH-HHHH
Confidence            2 34689999999999654 5443

>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A*

Probab=99.95  E-value=9.2e-30  Score=253.56  Aligned_cols=158  Identities=17%  Similarity=0.128  Sum_probs=123.3

Q ss_pred             ecccccccccc-cccc----cccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHH--Hhhhc---
Q psy11832        231 MGTSLVVQPFC-SLVD----KTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWM--KEGNL---  300 (494)
Q Consensus       231 N~~p~~~h~~a-~l~~----~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~--~~~i~---  300 (494)
                      +.+|+..|... +|++    +|++.+||||||||||++||  +++|+|+|||+++.+|++|++.|+.+..  ...+.   
T Consensus        82 ~~~Pn~~H~~La~Le~~~~~~g~~~~viTQNiDgLh~~AG--~~~vielHG~~~~~~C~~C~~~~~~~~~p~~~~~~~~~  159 (273)
T 3riy_A           82 SKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAG--TKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKG  159 (273)
T ss_dssp             TCCCCHHHHHHHHHHHHHHTTTCEEEEEESCCSCHHHHHT--CCSEEETTEEEEEEEETTTCCEEECCCSSSSGGGTTCC
T ss_pred             hCCCCHHHHHHHHHHHhhhhcCceeEEEEecccchHhhcC--CCCEEEecCcCCeeEcCCCCCcccccccchhhhhhccc
Confidence            35677777655 5663    68899999999999999999  6899999999999999999999853210  00000   


Q ss_pred             -------c---CCCCCCcc--CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhc
Q psy11832        301 -------L---GRMGITLG--LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLG  366 (494)
Q Consensus       301 -------~---~~~~~p~c--~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~  366 (494)
                             .   .....|.|  +.|+|   ++||+|||  |++|..++..+.+.+++||++||+||||+|   +|++.|+.
T Consensus       160 ~~~~~~~~~~~~~~~~P~C~~~~Cgg---~lrP~VV~FGE~lp~~~~~~a~~~~~~aDl~lviGTSl~V---~Paa~l~~  233 (273)
T 3riy_A          160 APEPGTQDASIPVEKLPRCEEAGCGG---LLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVV---YPAAMFAP  233 (273)
T ss_dssp             CCSTTCCCCCCCGGGSCBCCGGGCCC---BEEEEECCTTSBCCHHHHHHHHHHHHHCSEEEEESCCSCE---ETGGGHHH
T ss_pred             CCcccccccccccCCCCCCCCCCCCC---eeCCcEEEeCCcCCHHHHHHHHHHHhcCCEEEEEeeCCcc---hhHHHhHH
Confidence                   0   01124778  77988   58899888  677888888888888999999999999999   99999975


Q ss_pred             cc--CCC-------CCCCCCCcccEEEeCChhHHHHHHH
Q psy11832        367 LS--EGL-------GFDNENNVRDVFLEGDCDSGCQKLA  396 (494)
Q Consensus       367 ~~--~g~-------~~~~~~~~~dl~i~g~~~~~~~~L~  396 (494)
                      .+  .|.       +.+..+..+|+.|.|++++++|+|+
T Consensus       234 ~a~~~g~~~v~IN~~~t~~d~~~~~~i~g~~~~~l~~l~  272 (273)
T 3riy_A          234 QVAARGVPVAEFNTETTPATNRFRFHFQGPCGTTLPEAL  272 (273)
T ss_dssp             HHHHTTCCEEEEESSCCTTGGGSSEEEESCHHHHHHHHH
T ss_pred             HHHHCCCEEEEECCCCCCCCcceeEEEeCCHHHHHHHHh
Confidence            32  333       3444567899999999999999884

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=82.19  E-value=0.53  Score=33.48  Aligned_cols=30  Identities=17%  Similarity=0.148  Sum_probs=21.3

Q ss_pred             eeecCCCCCccchHHHHhhhccCCCCCCccCCCCCC
Q psy11832        280 TSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAGGL  315 (494)
Q Consensus       280 ~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c~~C~g~  315 (494)
                      .-.|.+||++++.++++-      .|.-+||-||--
T Consensus         3 iY~C~rCg~~fs~~el~~------lP~IrCpyCGyr   32 (48)
T 4ayb_P            3 VYRCGKCWKTFTDEQLKV------LPGVRCPYCGYK   32 (48)
T ss_dssp             --CCCCTTTTCCCCCSCC------CSSSCCTTTCCS
T ss_pred             EEEeeccCCCccHHHHhh------CCCcccCccCcE
Confidence            457999999999887542      345679999853

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	494
d1j8fa_	323	c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Ho	2e-46
d1j8fa_	323	c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Ho	4e-14
d1j8fa_	323	c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Ho	1e-08
d1q1aa_	289	c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces c	1e-37
d1q1aa_	289	c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces c	1e-04
d1q1aa_	289	c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces c	0.004
d2b4ya1	267	c.31.1.5 (A:36-302) NAD-dependent deacetylase sirt	7e-30
d1s5pa_	235	c.31.1.5 (A:) NAD-dependent deacetylase CobB {Esch	1e-29
d1yc5a1	245	c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA	7e-28
d1ma3a_	252	c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Arc	1e-27
d1m2ka_	249	c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Ar	7e-26

>d1j8fa_ c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Homo sapiens) [TaxId: 9606]} Length = 323

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: Sirt2 histone deacetylase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (410), Expect = 2e-46
 Identities = 136/267 (50%), Positives = 169/267 (63%), Gaps = 35/267 (13%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           +AGIPDFRSP +GLYDNLEKY LP+P AIFE+ YFK  PE F+ LAKELYP         
Sbjct: 57  SAGIPDFRSPSTGLYDNLEKYHLPYPEAIFEISYFKKHPEPFFALAKELYP--------- 107

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                G FKPT CHYF++LL  K LLLR +TQNID LERIAGL 
Sbjct: 108 ---------------------GQFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLE 146

Query: 124 DDKLVEAHGSFHTSHCLT--CRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENL 181
            + LVEAHG+F+TSHC++  CR +Y ++WMKE+IF+EV P CE C  LVKPDIVFFGE+L
Sbjct: 147 QEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSEVTPKCEDCQSLVKPDIVFFGESL 206

Query: 182 PSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFC 241
           P+R+F  +  DF K DLLL+MGTSL VQPF SL+ K  +  P+  LL+    +    PF 
Sbjct: 207 PARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISKAPLSTPR--LLINKEKAGQSDPFL 264

Query: 242 SLVDKTNIRGSDSDNIDNLERIAGLPD 268
            ++      G D D+      +A L +
Sbjct: 265 GMIMGLGG-GMDFDSKKAYRDVAWLGE 290

>d1j8fa_ c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Homo sapiens) [TaxId: 9606]} Length = 323

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: Sirt2 histone deacetylase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.9 bits (173), Expect = 4e-14
 Identities = 65/171 (38%), Positives = 84/171 (49%), Gaps = 26/171 (15%)

Query: 256 NIDNLERIAGLPDDKLVEAHGSFHTSHCLTC--RKDYSVAWMKEGNL------------L 301
           NID LERIAGL  + LVEAHG+F+TSHC++   R +Y ++WMKE               L
Sbjct: 135 NIDTLERIAGLEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSEVTPKCEDCQSL 194

Query: 302 GRMGITLGLHAGGLSSIPGGAEVFSA--LCLEFG----VHSAS-----APPHCPRLLINK 350
            +  I     +            F    L L  G    V   +     AP   PRLLINK
Sbjct: 195 VKPDIVFFGESLPARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISKAPLSTPRLLINK 254

Query: 351 EKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGW 401
           EK G      L  ++GL  G+ FD++   RDV   G+CD GC  LA++LGW
Sbjct: 255 EKAGQSDPF-LGMIMGLGGGMDFDSKKAYRDVAWLGECDQGCLALAELLGW 304

>d1j8fa_ c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Homo sapiens) [TaxId: 9606]} Length = 323

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: Sirt2 histone deacetylase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (129), Expect = 1e-08
 Identities = 19/41 (46%), Positives = 28/41 (68%)

Query: 453 LGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGKDI 493
           +GL  G+ FD++   RDV   G+CD GC  LA++LGW K++
Sbjct: 268 MGLGGGMDFDSKKAYRDVAWLGECDQGCLALAELLGWKKEL 308

>d1q1aa_ c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 289

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: Hst2
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  137 bits (346), Expect = 1e-37
 Identities = 93/251 (37%), Positives = 126/251 (50%), Gaps = 49/251 (19%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
           + GIPDFRSPG+GLY NL + KLP+P A+F++D+F+  P  FYTLAKELY          
Sbjct: 34  SCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYTLAKELY---------- 83

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                G+F+P+  HY LKL   K++L R +TQNID LER AG+ 
Sbjct: 84  --------------------PGNFRPSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVK 123

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI---PTCEKCNGLVKPDIVFFGEN 180
           DD ++EAHGSF   HC+ C K Y     K ++    I     C+ C  LVKP IVFFGE+
Sbjct: 124 DDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELVKPAIVFFGED 183

Query: 181 LPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPF 240
           LP  +      D       +                       +  L++++GTSL V PF
Sbjct: 184 LPDSFSETWLNDSEWLREKITTSGKHP----------------QQPLVIVVGTSLAVYPF 227

Query: 241 CSLVDKTNIRG 251
            SL ++   + 
Sbjct: 228 ASLPEEIPRKV 238

>d1q1aa_ c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 289

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: Hst2
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.4 bits (96), Expect = 1e-04
 Identities = 14/63 (22%), Positives = 20/63 (31%), Gaps = 17/63 (26%)

Query: 339 APPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADM 398
            P    R+L N E VG                  F       D+ +    D   ++L + 
Sbjct: 234 IPRKVKRVLCNLETVG-----------------DFKANKRPTDLIVHQYSDEFAEQLVEE 276

Query: 399 LGW 401
           LGW
Sbjct: 277 LGW 279

>d1q1aa_ c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 289

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: Hst2
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.8 bits (84), Expect = 0.004
 Identities = 8/34 (23%), Positives = 14/34 (41%)

Query: 460 GFDNENNVRDVFLEGDCDSGCQKLADMLGWGKDI 493
            F       D+ +    D   ++L + LGW +D 
Sbjct: 250 DFKANKRPTDLIVHQYSDEFAEQLVEELGWQEDF 283

>d2b4ya1 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirtuin-5 {Human (Homo sapiens) [TaxId: 9606]} Length = 267

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: NAD-dependent deacetylase sirtuin-5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (289), Expect = 7e-30
 Identities = 59/234 (25%), Positives = 83/234 (35%), Gaps = 52/234 (22%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
            +G+P FR  G G +   +   L  P+A         R   FY   +E+  GS +P   H
Sbjct: 29  ESGVPTFRGAG-GYWRKWQAQDLATPLAFAH---NPSRVWEFYHYRREVM-GSKEPNAGH 83

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
             +                                L ++   +   TQNID L R AG  
Sbjct: 84  RAI--------------------------AECETRLGKQGRRVVVITQNIDELHRKAG-- 115

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAW-----------------MKERIFAEVIP--TCE 164
              L+E HGS   + C +C                             I  E +P     
Sbjct: 116 TKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEA 175

Query: 165 KCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKV 218
            C GL++P +V+FGENL       VD +    DL L++GTS VV P      +V
Sbjct: 176 GCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQV 229

>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia coli [TaxId: 562]} Length = 235

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: NAD-dependent deacetylase CobB
species: Escherichia coli [TaxId: 562]

 Score =  113 bits (284), Expect = 1e-29
 Identities = 44/216 (20%), Positives = 68/216 (31%), Gaps = 41/216 (18%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
            +GI  FR+   GL++      +  P      + F   PE                    
Sbjct: 15  ESGIRTFRAAD-GLWEEHRVEDVATP------EGFDRDPELVQAFYN------------- 54

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFL-KLLHQKNLLLRHFTQNIDNLERIAGL 122
                            Q+     +P   H  L KL           TQNIDNL   AG 
Sbjct: 55  -------------ARRRQLQQPEIQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAG- 100

Query: 123 PDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLP 182
            +  ++  HG      C    +   V      +  E    C +    ++P +V+FGE   
Sbjct: 101 -NTNVIHMHGELLKVRCSQSGQ---VLDWTGDVTPEDKCHCCQFPAPLRPHVVWFGEMPL 156

Query: 183 SRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKV 218
                 + +    AD+ + +GTS  V P    V + 
Sbjct: 157 --GMDEIYMALSMADIFIAIGTSGHVYPAAGFVHEA 190

>d1yc5a1 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA {Thermotoga maritima [TaxId: 2336]} Length = 245

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: NAD-dependent deacetylase NpdA
species: Thermotoga maritima [TaxId: 2336]

 Score =  109 bits (273), Expect = 7e-28
 Identities = 67/213 (31%), Positives = 99/213 (46%), Gaps = 38/213 (17%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
            +GIPDFR P  G+Y         +   +F++D+F   PE FY  AKE            
Sbjct: 27  PSGIPDFRGPN-GIYKK-------YSQNVFDIDFFYSHPEEFYRFAKEGIFP-------- 70

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                   KP   H  L  L +K L+    TQNID L + AG  
Sbjct: 71  --------------------MLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAG-- 108

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPS 183
             K++E HG+    +C+ C K Y+V  + +++ +  +P C+ CN L++P+IVFFGENLP 
Sbjct: 109 SKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDVPLCDDCNSLIRPNIVFFGENLPQ 168

Query: 184 RYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVD 216
                      +A L++++G+SLVV P   L  
Sbjct: 169 DALREAIGLSSRASLMIVLGSSLVVYPAAELPL 201

>d1ma3a_ c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 252

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: AF0112, Sir2 homolog (Sir2-AF2)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score =  109 bits (272), Expect = 1e-27
 Identities = 56/216 (25%), Positives = 83/216 (38%), Gaps = 39/216 (18%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
            +GIP FR    GL+          P  +  +  FK  P AF+  + E+    F      
Sbjct: 29  ESGIPTFRGED-GLWRKY------DPEEVASISGFKRNPRAFWEFSMEMKDKLFA----- 76

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                   +P P HY +  L +  ++    TQNID L + AG  
Sbjct: 77  ------------------------EPNPAHYAIAELERMGIVKAVITQNIDMLHQRAG-- 110

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFA-EVIPTCEKCNGLVKPDIVFFGENLP 182
             +++E HGS     CL C + Y  +   E     E+    +  +  VKP +V FGE LP
Sbjct: 111 SRRVLELHGSMDKLDCLDCHETYDWSEFVEDFNKGEIPRCRKCGSYYVKPRVVLFGEPLP 170

Query: 183 SRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKV 218
            R       +    D  +++G+SLVV P   L    
Sbjct: 171 QRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIA 206

>d1m2ka_ c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 249

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: AF1676, Sir2 homolog (Sir2-AF1?)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score =  103 bits (258), Expect = 7e-26
 Identities = 52/215 (24%), Positives = 80/215 (37%), Gaps = 40/215 (18%)

Query: 4   AAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCH 63
            +GIP FR    GL++         P  +     F   PE  +                 
Sbjct: 26  ESGIPTFRGKD-GLWNRY------RPEELANPQAFAKDPEKVWKWYAWRMEK-------- 70

Query: 64  YFLKLLHQKNLLLRHFTQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLP 123
                                 + +P   H     L +  +L    TQN+D+L   AG  
Sbjct: 71  --------------------VFNAQPNKAHQAFAELERLGVLKCLITQNVDDLHERAG-- 108

Query: 124 DDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVKPDIVFFGENLPS 183
              ++  HGS     C +C   + V    +      +P C+KC  L++P +V+ GE LP 
Sbjct: 109 SRNVIHLHGSLRVVRCTSCNNSFEVESAPKI---PPLPKCDKCGSLLRPGVVWAGEMLPP 165

Query: 184 RYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKV 218
               R   +  +AD++++ GTS VVQP  SL   V
Sbjct: 166 DVLDRAMREVERADVIIVAGTSAVVQPAASLPLIV 200

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	494
d1j8fa_	323	Sirt2 histone deacetylase {Human (Homo sapiens) [T	100.0
d1q1aa_	289	Hst2 {Baker's yeast (Saccharomyces cerevisiae) [Ta	100.0
d1yc5a1	245	NAD-dependent deacetylase NpdA {Thermotoga maritim	100.0
d1m2ka_	249	AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeo	100.0
d1s5pa_	235	NAD-dependent deacetylase CobB {Escherichia coli [	100.0
d2b4ya1	267	NAD-dependent deacetylase sirtuin-5 {Human (Homo s	100.0
d1ma3a_	252	AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeog	100.0
d1j8fa_	323	Sirt2 histone deacetylase {Human (Homo sapiens) [T	100.0
d1q1aa_	289	Hst2 {Baker's yeast (Saccharomyces cerevisiae) [Ta	99.96
d1yc5a1	245	NAD-dependent deacetylase NpdA {Thermotoga maritim	99.96
d1s5pa_	235	NAD-dependent deacetylase CobB {Escherichia coli [	99.96
d1m2ka_	249	AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeo	99.95
d2b4ya1	267	NAD-dependent deacetylase sirtuin-5 {Human (Homo s	99.95
d1ma3a_	252	AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeog	99.92
d2ji7a1	175	Oxalyl-CoA decarboxylase {Oxalobacter formigenes [	87.17
d1ybha1	179	Acetohydroxyacid synthase catalytic subunit {Thale	85.84
d2ihta1	177	Carboxyethylarginine synthase {Streptomyces clavul	84.21
d2djia1	177	Pyruvate oxidase {Aerococcus viridans [TaxId: 1377	82.94
d1ovma1	161	Indole-3-pyruvate decarboxylase {Enterobacter cloa	81.77

>d1j8fa_ c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: Sirt2 histone deacetylase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-61  Score=489.42  Aligned_cols=200  Identities=64%  Similarity=1.121  Sum_probs=176.7

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+++|+|+++.++++++|++++++++|++||+.||.++++++...                        
T Consensus        54 ISt~SGIPDFRs~~~Glw~~~~~~~l~~~e~~~~~~~f~~~p~~f~~~~~~~~~~~------------------------  109 (323)
T d1j8fa_          54 ISTSAGIPDFRSPSTGLYDNLEKYHLPYPEAIFEISYFKKHPEPFFALAKELYPGQ------------------------  109 (323)
T ss_dssp             GTGGGTCCCTTCSCSTTSTTTTTTCCSSGGGGGBHHHHHHCCHHHHHHHHHHSSSS------------------------
T ss_pred             eecccCCCCCcCCCCCCccCCcccCCCCHHHHhCHHHHHHChHHHHHHHHHHhhcc------------------------
Confidence            68999999999975799999999999899999999999999999999998887544                        


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCc--ccchHHHHHHHhhc
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRK--DYSVAWMKERIFAE  158 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~--~~~~~~~~~~i~~~  158 (494)
                            ++||++|++|+.|+++|++.+||||||||||++||+|+++|+|+|||+++++|..|+.  .|+.++..+.+...
T Consensus       110 ------~~Pn~~H~~l~~L~~~g~l~~viTQNIDgLh~~AG~~~~~viElHGsl~~~~C~~c~~~~~~~~~~~~~~~~~~  183 (323)
T d1j8fa_         110 ------FKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSE  183 (323)
T ss_dssp             ------CCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCGGGEEETTEEEEEEEESCTTTCCEECHHHHHHHHHTT
T ss_pred             ------CCCCHHHHHHHHHHHcCCceEEEeccccchhhccCCchhhheeeccccccceecccccchhhhhhhhhhhhccc
Confidence                  4555556666668889999999999999999999999999999999999999997664  56677777778888


Q ss_pred             CCCCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecc
Q psy11832        159 VIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGT  233 (494)
Q Consensus       159 ~~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~  233 (494)
                      .+|+|+.|||.+||+||||||++|+..++.+.+++.+||++|||||||+|+|+++|+..+   ..+...|+||.+
T Consensus       184 ~~p~C~~CgG~lRP~VV~FGE~lP~~~~~~a~~~~~~aDllIViGTSL~V~Paa~l~~~a---~~~~~~v~IN~e  255 (323)
T d1j8fa_         184 VTPKCEDCQSLVKPDIVFFGESLPARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISKA---PLSTPRLLINKE  255 (323)
T ss_dssp             CCCBCTTTCCBEEEEECCBTSCCCHHHHHHHHHGGGSCSEEEEESSCSCSHHHHHHHTTS---CTTCCEEEEESS
T ss_pred             cccccccCCCccCCCEEEcCCCCcHHHHHHHHHHHhCCCEEEEECCCCeecCHHHHHHHH---HcCCCEEEEECC
Confidence            899999999999999999999999999999999999999999999999999999999887   234445556633

>d1q1aa_ c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: Hst2
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=8.5e-55  Score=435.59  Aligned_cols=198  Identities=48%  Similarity=0.894  Sum_probs=173.1

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+++|+|+++.++++.+|+.++++++|.+||..||.++++++..                         
T Consensus        31 iSt~SGIPdfR~~~~Glw~~~~~~~~~~p~~~~~~~~f~~~p~~~~~~~~~~~~~-------------------------   85 (289)
T d1q1aa_          31 ISTSCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYTLAKELYPG-------------------------   85 (289)
T ss_dssp             GGGGGTCCCSSSTTTSGGGSCGGGCCSSGGGGGBHHHHHHCCHHHHHHHHHHCSS-------------------------
T ss_pred             hhhhhCCCCCcCCCCCCccccccccCCcHHHHhhHHHHHhChHHHHHHHHHHhhc-------------------------
Confidence            6899999999998669999998888888999999999999999999999887643                         


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhh---
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFA---  157 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~---  157 (494)
                           +++||++|++|+.|+++|+..+||||||||||++||+++++|+|+|||+.+.+|.+|++.|+.+.....+..   
T Consensus        86 -----~~~Pn~~H~~L~~L~~~g~~~~viTQNIDgLh~~AG~~~~~v~elHGs~~~~~C~~C~~~~~~~~~~~~~~~~~~  160 (289)
T d1q1aa_          86 -----NFRPSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPI  160 (289)
T ss_dssp             -----SCCCCHHHHHHHHHHHTTCEEEEEECCSSCHHHHTTCCGGGEEETTEEEEEEEETTTCCEECHHHHHHHHTCSSC
T ss_pred             -----cCCCchhHHHHHHHHhcCCceEEEeeccCCchhccCCcccchhhccccceeeeecCCCccCCHHHHHHHhhhccc
Confidence                 456677777777799999999999999999999999999999999999999999999999988877666543   


Q ss_pred             cCCCCCCCCCCeeeeeEEecCCCCChHHHHHHHhH-------------cCCCCeEEEeCcCCChhhhhhhhhhhhhcCCC
Q psy11832        158 EVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVD-------------FPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK  224 (494)
Q Consensus       158 ~~~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~-------------~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~  224 (494)
                      ...|+|+.|||.+||+||+|||++|...++.+.++             +.+||++|||||||+|+|+++|++.+   ..+
T Consensus       161 ~~~p~c~~Cgg~lrP~vv~FGE~lp~~~~~~~~~~~e~~~~~~~~~~~~~~aDlllviGTSl~V~Pa~~l~~~a---~~~  237 (289)
T d1q1aa_         161 KDFVKCDVCGELVKPAIVFFGEDLPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASLPEEI---PRK  237 (289)
T ss_dssp             CSCCBCTTTCCBEEEEECCBTSBCCHHHHHHHHHHHHHHHHHHHC----CCCCEEEEESCCCCEETTTHHHHHS---CTT
T ss_pred             cccCccccccccccCceeeccccCChHHHHHHHHHHHHHHHHHHHHhhcccCCEEEEECCCceecCHHHHHHHH---HcC
Confidence            35789999999999999999999999888877654             35899999999999999999999988   234


Q ss_pred             ceEEEEe
Q psy11832        225 ADLLLIM  231 (494)
Q Consensus       225 a~lv~IN  231 (494)
                      ..+|+||
T Consensus       238 ~~~viIN  244 (289)
T d1q1aa_         238 VKRVLCN  244 (289)
T ss_dssp             SEEEEES
T ss_pred             CCEEEEe
Confidence            5566666

>d1yc5a1 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: NAD-dependent deacetylase NpdA
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.5e-51  Score=402.87  Aligned_cols=207  Identities=33%  Similarity=0.580  Sum_probs=178.1

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+ +|+|+++       +++++++++|.+||+.||.|+++++.                          
T Consensus        24 iS~~SGIPdfR~~-~G~w~~~-------~~~~~~~~~f~~~p~~~~~~~~~~~~--------------------------   69 (245)
T d1yc5a1          24 ISTPSGIPDFRGP-NGIYKKY-------SQNVFDIDFFYSHPEEFYRFAKEGIF--------------------------   69 (245)
T ss_dssp             GTGGGTCCCC-------------------CCTTBHHHHHHCHHHHHHHHHHHTG--------------------------
T ss_pred             hccccCCCCccCc-CCCccCC-------CcccccHHHHHhhhHHHHHHHHhhhh--------------------------
Confidence            6899999999999 6999864       46789999999999999999877542                          


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCC
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI  160 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~  160 (494)
                        .+.+++||++|++|++|++++++.+||||||||||++||+  ++|+|+||++++.+|..|++.|+.+.+...+.....
T Consensus        70 --~~~~~~P~~~H~~L~~l~~~~~~~~viTQNiDgLh~~AG~--~~v~elHG~l~~~~C~~c~~~~~~~~~~~~~~~~~~  145 (245)
T d1yc5a1          70 --PMLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGS--KKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDV  145 (245)
T ss_dssp             --GGGGCCCCHHHHHHHHHHHTTSCSEEEECCCSCHHHHTTC--SCEEETTEEEEEEEETTTCCEEEHHHHHHHTTTCSS
T ss_pred             --hhhhhhhhhhhHHHHHHHhcCCCceEeecccchHHHHcCC--ccccccccccceeeecccCCCccHHHHhhhhhcccC
Confidence              2346899999999999999999999999999999999997  589999999999999999999998888887878889


Q ss_pred             CCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccccc
Q psy11832        161 PTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPF  240 (494)
Q Consensus       161 P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~~  240 (494)
                      |.|+.|||.+||+||+|||++|+..++.|.++++++|++|||||||.|+|+++++..+  ..+++++|+||.+|+.....
T Consensus       146 p~c~~Cgg~lrP~Vv~FgE~lp~~~~~~a~~~~~~~DlllviGTSl~V~p~~~l~~~a--~~~g~~~i~IN~~~t~~d~~  223 (245)
T d1yc5a1         146 PLCDDCNSLIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLIT--VRSGGKLVIVNLGETPFDDI  223 (245)
T ss_dssp             CBCTTTCCBEEEEECCBTSBCCHHHHHHHHHHHHHCSEEEEESCCSCEETGGGHHHHH--HHHTCEEEEECSSCCTTGGG
T ss_pred             CCccccCCcccCcEEEccccCCHHHHHHHHHHhhcCCEEEEECCCeEEechhhhhHHH--HHcCCeEEEECCCCCCCCcc
Confidence            9999999999999999999999999999999999999999999999999999999988  45789999999999987776


Q ss_pred             ccccccc
Q psy11832        241 CSLVDKT  247 (494)
Q Consensus       241 a~l~~~~  247 (494)
                      +.+.-.|
T Consensus       224 ~d~~i~g  230 (245)
T d1yc5a1         224 ATLKYNM  230 (245)
T ss_dssp             CSEEECS
T ss_pred             eeEEEeC
Confidence            6554443

>d1m2ka_ c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: AF1676, Sir2 homolog (Sir2-AF1?)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=100.00  E-value=2.5e-50  Score=394.86  Aligned_cols=206  Identities=26%  Similarity=0.448  Sum_probs=181.2

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+ +|+|+++      .+++++++++|++||+.||.+++..+.                          
T Consensus        23 iS~~sGIPdfR~~-~Glw~~~------~~~~~~~~~~f~~~p~~~~~~~~~~~~--------------------------   69 (249)
T d1m2ka_          23 VSAESGIPTFRGK-DGLWNRY------RPEELANPQAFAKDPEKVWKWYAWRME--------------------------   69 (249)
T ss_dssp             GGGGGTCCCSSST-TCHHHHS------CHHHHSSHHHHHHCHHHHHHHHHHHHH--------------------------
T ss_pred             hhhccCCCCccCC-CCCccCC------CccccccHHHHHhhHHHHHHHHHHhhc--------------------------
Confidence            7999999999999 6999875      388999999999999999998876531                          


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCC
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI  160 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~  160 (494)
                        ....++||.+|++|++|+++|++.+||||||||||++||+  ++|+|+|||+++.+|..|++.++.+..   .....+
T Consensus        70 --~~~~~~P~~~H~~L~~L~~~g~~~~iiTqNiDgL~~~aG~--~~v~elHG~l~~~~C~~c~~~~~~~~~---~~~~~~  142 (249)
T d1m2ka_          70 --KVFNAQPNKAHQAFAELERLGVLKCLITQNVDDLHERAGS--RNVIHLHGSLRVVRCTSCNNSFEVESA---PKIPPL  142 (249)
T ss_dssp             --HHHHCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTC--CSEEETTEEEEEEEESSSSCEEECSSC---CCSSSC
T ss_pred             --cccccCCcchhHHHHHHHHcCCceEEEeeeeCCHHHhcCC--ceEEEeccchhheeeccCCCccccccc---ccCCCC
Confidence              1235799999999999999999999999999999999996  689999999999999999998765422   233578


Q ss_pred             CCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccccc
Q psy11832        161 PTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPF  240 (494)
Q Consensus       161 P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~~  240 (494)
                      |+||.|||.+||+||+|||.+|...++.+.++++++|++||||||+.|+|+++++..+  ...++++|+||.+|+.....
T Consensus       143 p~C~~Cgg~lrP~Vv~FgE~lp~~~~~~a~~~~~~~DlllviGTSl~V~pa~~l~~~a--~~~g~~~i~IN~~~t~~d~~  220 (249)
T d1m2ka_         143 PKCDKCGSLLRPGVVWAGEMLPPDVLDRAMREVERADVIIVAGTSAVVQPAASLPLIV--KQRGGAIIEINPDETPLTPI  220 (249)
T ss_dssp             CBCSSSSSBEEEEECCTTSCCCHHHHHHHHHHHHHCSEEEEESCCSCSTTGGGHHHHH--HHTTCEEEEECSSCCTTGGG
T ss_pred             CCcccCCCEeccceeeccccCchHHHHHHHHhcccCCEEEEECCCCeeeehhhHHHHH--HHcCCeEEEECCCCCCCCCc
Confidence            9999999999999999999999999999999999999999999999999999999988  46689999999999987776


Q ss_pred             cccccccc
Q psy11832        241 CSLVDKTN  248 (494)
Q Consensus       241 a~l~~~~~  248 (494)
                      +.+.-.|.
T Consensus       221 ~d~~i~g~  228 (249)
T d1m2ka_         221 ADYSLRGK  228 (249)
T ss_dssp             CSEEECSC
T ss_pred             ccEEEECC
Confidence            65544443

>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: NAD-dependent deacetylase CobB
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.3e-49  Score=384.92  Aligned_cols=203  Identities=21%  Similarity=0.283  Sum_probs=163.7

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+ +|+|+++.      +++++++++|.+||+.+|.|++....                          
T Consensus        12 iS~~SGIPdfR~~-~G~w~~~~------~~~~~~~~~f~~~p~~~~~~~~~~~~--------------------------   58 (235)
T d1s5pa_          12 ISAESGIRTFRAA-DGLWEEHR------VEDVATPEGFDRDPELVQAFYNARRR--------------------------   58 (235)
T ss_dssp             HHHTTTCCCCCSS-SCEETTEE------HHHHSSHHHHHHCHHHHHHHHHHHHH--------------------------
T ss_pred             hhhccCCCCCcCc-CCCccCCC------cccCCCHHHHHhCHHHHHHHHHHHHH--------------------------
Confidence            5899999999999 69998753      68899999999999998887654310                          


Q ss_pred             ccccCCCCCChhHHHHHHHHhc-CCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcC
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQK-NLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEV  159 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~-~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~  159 (494)
                      ...+.+++||++|++|++|+++ |+..+||||||||||++||.  ++|+|+|||+++.+|..|++.++...   .+....
T Consensus        59 ~~~~~~~~Pn~~H~~l~~l~~~~g~~~~viTQNIDgLh~~AG~--~~v~ElHGsl~~~~C~~C~~~~~~~~---~~~~~~  133 (235)
T d1s5pa_          59 QLQQPEIQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAGN--TNVIHMHGELLKVRCSQSGQVLDWTG---DVTPED  133 (235)
T ss_dssp             HHTSTTCCCCHHHHHHHHHHHHHGGGEEEEESCCSSHHHHHTC--CSCEETTEEEEEEEETTTCCEEECCS---CCCSSC
T ss_pred             hhcccccCCcHHHHHHHHHHHHhccceeEeeccchHHHHhcCC--chhhhhhCcccEEEECCCCCcccccc---cccccc
Confidence            0113467899999999999875 88999999999999999996  69999999999999999999876432   223456


Q ss_pred             CCCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccccccc
Q psy11832        160 IPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQP  239 (494)
Q Consensus       160 ~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~  239 (494)
                      .|.|+.|||.+||+||||||.+|.  ++++.+++++||++|||||||+|+|+++|+..+  ...++++|+||.+|+....
T Consensus       134 ~~~c~~Cgg~lrP~VV~FGE~~~~--~~~~~~~~~~aDlllviGTSl~V~pa~~l~~~a--~~~g~~iiiIN~~~t~~~~  209 (235)
T d1s5pa_         134 KCHCCQFPAPLRPHVVWFGEMPLG--MDEIYMALSMADIFIAIGTSGHVYPAAGFVHEA--KLHGAHTVELNLEPSQVGN  209 (235)
T ss_dssp             CC-------CEEEEECCTTSCCSS--HHHHHHHHHHCSEEEEESCCTTEETGGGHHHHH--HHTTCEEEEEESSSCC---
T ss_pred             cccccccccccccceeecCCCChh--HHHHHHHHHhCCEEEEEccCCcccCHHHHHHHH--HHcCCeEEEECCCCCCCCC
Confidence            899999999999999999999876  578889999999999999999999999999998  4578999999999999877


Q ss_pred             cccccc
Q psy11832        240 FCSLVD  245 (494)
Q Consensus       240 ~a~l~~  245 (494)
                      .+.+.-
T Consensus       210 ~~~~~i  215 (235)
T d1s5pa_         210 EFAEKY  215 (235)
T ss_dssp             CCSEEE
T ss_pred             cccEEE
Confidence            765443

>d2b4ya1 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirtuin-5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: NAD-dependent deacetylase sirtuin-5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-48  Score=382.98  Aligned_cols=208  Identities=26%  Similarity=0.419  Sum_probs=166.1

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+ +|+|+++      .+++++++.+|+++|+.||.|+...+.                          
T Consensus        26 iS~~SGIPdfR~~-~G~~~~~------~~~~~~~~~~~~~~p~~~w~~~~~~~~--------------------------   72 (267)
T d2b4ya1          26 VSAESGVPTFRGA-GGYWRKW------QAQDLATPLAFAHNPSRVWEFYHYRRE--------------------------   72 (267)
T ss_dssp             GGGGGTC--------CCBTTB------CHHHHSSHHHHHHCHHHHHHHHHHHHH--------------------------
T ss_pred             eehhhCCCCccCC-CCCccCC------CchhccCHHHHHHhhHHHHHHHHHHHH--------------------------
Confidence            6899999999999 6999876      378899999999999999998765421                          


Q ss_pred             ccccCCCCCChhHHHHHHHH----hcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHH-----
Q psy11832         81 QVYWGSFKPTPCHYFLKLLH----QKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWM-----  151 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~----~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~-----  151 (494)
                        .+.+++||.+|++|++|+    ++|++++||||||||||++||.  ++|+|+||++++++|..|++.+.....     
T Consensus        73 --~~~~~~P~~~h~~l~~l~~~~~~~g~~~~viTQNIDgLh~~aG~--~~vielHG~~~~~~C~~C~~~~~~~~~~~~~~  148 (267)
T d2b4ya1          73 --VMGSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGT--KNLLEIHGSLFKTRCTSCGVVAENYKSPICPA  148 (267)
T ss_dssp             --HHHTCCCCHHHHHHHHHHHHHHTTTCEEEEEECCSSCHHHHHTC--CSEEETTEEEEEEEETTTCCEEECCCSSSSGG
T ss_pred             --HhcccCcchHHHHHHHHHHHHhhcCceeEEEecchHHHHHhCCC--CceEEEeccccEEEECCCCCcccccccccchh
Confidence              123456777777777776    5689999999999999999996  799999999999999999986531100     


Q ss_pred             ------------HHHHhhcCCCCCCC--CCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhh
Q psy11832        152 ------------KERIFAEVIPTCEK--CNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDK  217 (494)
Q Consensus       152 ------------~~~i~~~~~P~C~~--Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~  217 (494)
                                  ...+....+|+|+.  |||.+||+||||||.+|+..++.+.+++++||++|||||||+|+|+++|++.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~p~C~~~~Cgg~lrP~VV~FgE~~p~~~~~~a~~~~~~aDlllviGTSl~V~pa~~l~~~  228 (267)
T d2b4ya1         149 LSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQ  228 (267)
T ss_dssp             GTTCCCCSTTCCCCCCCGGGSCBCCSTTTCCBEEEEECCTTCCCCHHHHHHHHHHHHHCSEEEEESCCSCSTTGGGHHHH
T ss_pred             hhccCCCCcchhhhhcchhhcccccccCCCCEecCcEEEcCCcCCHHHHHHHHHhhhhCCeEEEECCCCeecCHHHHHHH
Confidence                        00122335899986  9999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCceEEEEecccccccccccccccc
Q psy11832        218 VDVDFPKADLLLIMGTSLVVQPFCSLVDKT  247 (494)
Q Consensus       218 ~~~~~~~a~lv~IN~~p~~~h~~a~l~~~~  247 (494)
                      +  ...++++|+||.+|+.....+.+.-.|
T Consensus       229 a--~~~g~~vv~IN~~~t~~d~~~d~~i~g  256 (267)
T d2b4ya1         229 V--AARGVPVAEFNTETTPATNRFRFHFQG  256 (267)
T ss_dssp             H--HHTTCCEEEEESSCCTTGGGSSEEEES
T ss_pred             H--HHcCCcEEEEeCCCCCCCCccCEEEeC
Confidence            8  455889999999999877666554433

>d1ma3a_ c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: AF0112, Sir2 homolog (Sir2-AF2)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=100.00  E-value=3.3e-47  Score=372.87  Aligned_cols=209  Identities=27%  Similarity=0.453  Sum_probs=172.3

Q ss_pred             CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832          1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT   80 (494)
Q Consensus         1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~   80 (494)
                      |||+||||||||+ +|+|+++      ++++++++.+|.++|+.||.|+...+.                          
T Consensus        26 iS~~SGiPdfR~~-~G~w~~~------~~~~~~~~~~f~~~p~~~~~~~~~~~~--------------------------   72 (252)
T d1ma3a_          26 ISAESGIPTFRGE-DGLWRKY------DPEEVASISGFKRNPRAFWEFSMEMKD--------------------------   72 (252)
T ss_dssp             GSCC-----------CCSCSS------CHHHHTBHHHHTTCHHHHHHHHHHTHH--------------------------
T ss_pred             hhhhhCCCCccCc-CCCccCC------CcchhhchhhhhhCHHHHHHHHhhcch--------------------------
Confidence            7999999999999 6999876      489999999999999999988765321                          


Q ss_pred             ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHH-HhhcC
Q psy11832         81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKER-IFAEV  159 (494)
Q Consensus        81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~-i~~~~  159 (494)
                         ...++||.+|++|+.|++++++++||||||||||++||+  ++|+|+||+++..+|+.|++.+..+..... .....
T Consensus        73 ---~~~~~P~~~h~~l~~l~~~~~~~~viTqNiDgL~~kaG~--~~v~e~hG~~~~~~C~~~~~~~~~~~~~~~~~~~~~  147 (252)
T d1ma3a_          73 ---KLFAEPNPAHYAIAELERMGIVKAVITQNIDMLHQRAGS--RRVLELHGSMDKLDCLDCHETYDWSEFVEDFNKGEI  147 (252)
T ss_dssp             ---HHTCCCCHHHHHHHHHHHTTSEEEEEESCCSCHHHHHTC--CSEEETTEEEEEEEETTTCCEEEGGGTHHHHHTTCC
T ss_pred             ---hhhcCCCHHHHHHHHHhhcCCccEEEecchhHHHHhcCC--cchhhhcCCcceeEEcccccccccchhhhhhhcCCC
Confidence               124689999999999999999999999999999999996  699999999999999999998766554333 34457


Q ss_pred             CCCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccccccc
Q psy11832        160 IPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQP  239 (494)
Q Consensus       160 ~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~  239 (494)
                      .|.|+.|||.+||+||+|||+++...+..+.+++++||++|+||||+.|+|+.++++.+  ..+++++|+||.+|+....
T Consensus       148 ~~~c~~cgg~lrP~vv~fgE~~~~~~~~~~~~~~~~~dl~LviGTSl~V~p~~~~~~~a--~~~~~~~i~IN~~~~~~d~  225 (252)
T d1ma3a_         148 PRCRKCGSYYVKPRVVLFGEPLPQRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIA--KKAGAKMIIVNAEPTMADP  225 (252)
T ss_dssp             CCCTTTCCSCEEEEECCBTSBCCHHHHHHHHHHHHHCSEEEEESCCSCEETGGGHHHHH--HHHTCEEEEEESSCCTTGG
T ss_pred             CCCcccccccCCCeEEECCCcCchHHHHHHHHHhhCCCeEEEecCCceeeechHHHHHH--HHcCCeEEEECCCCCCCCC
Confidence            89999999999999999999999999999999999999999999999999999999988  4568999999999998877


Q ss_pred             cccccccccc
Q psy11832        240 FCSLVDKTNI  249 (494)
Q Consensus       240 ~a~l~~~~~l  249 (494)
                      .+.+.-.|..
T Consensus       226 ~~d~~i~g~~  235 (252)
T d1ma3a_         226 IFDVKIIGKA  235 (252)
T ss_dssp             GCSEEEESCH
T ss_pred             ceeEEEECCH
Confidence            6655444443

>d1j8fa_ c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: Sirt2 histone deacetylase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-40  Score=330.65  Aligned_cols=195  Identities=32%  Similarity=0.489  Sum_probs=156.3

Q ss_pred             ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCC--CccchHHHHhhhccCCCCCC
Q psy11832        231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCR--KDYSVAWMKEGNLLGRMGIT  307 (494)
Q Consensus       231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~--~~y~~~~~~~~i~~~~~~~p  307 (494)
                      +.+|+..|.+. .|+++|++.++|||||||||++||+++++|||+|||+++.+|+.|+  +.|+.+++++.+..+.  .|
T Consensus       109 ~~~Pn~~H~~l~~L~~~g~l~~viTQNIDgLh~~AG~~~~~viElHGsl~~~~C~~c~~~~~~~~~~~~~~~~~~~--~p  186 (323)
T d1j8fa_         109 QFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSEV--TP  186 (323)
T ss_dssp             SCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCGGGEEETTEEEEEEEESCTTTCCEECHHHHHHHHHTTC--CC
T ss_pred             cCCCCHHHHHHHHHHHcCCceEEEeccccchhhccCCchhhheeeccccccceecccccchhhhhhhhhhhhcccc--cc
Confidence            35788888876 5788999999999999999999999999999999999999999655  6678888888776554  47


Q ss_pred             ccCCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhcccCCCCCCCCCCcccEEEe
Q psy11832        308 LGLHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLE  385 (494)
Q Consensus       308 ~c~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~~g~~~~~~~~~~dl~i~  385 (494)
                      .|+.|+|   ++||+|||  |++|..++..+.+++.+||++|||||||+|   +|+++|+..+.       .+.+.+   
T Consensus       187 ~C~~CgG---~lRP~VV~FGE~lP~~~~~~a~~~~~~aDllIViGTSL~V---~Paa~l~~~a~-------~~~~~v---  250 (323)
T d1j8fa_         187 KCEDCQS---LVKPDIVFFGESLPARFFSCMQSDFLKVDLLLVMGTSLQV---QPFASLISKAP-------LSTPRL---  250 (323)
T ss_dssp             BCTTTCC---BEEEEECCBTSCCCHHHHHHHHHGGGSCSEEEEESSCSCS---HHHHHHHTTSC-------TTCCEE---
T ss_pred             ccccCCC---ccCCCEEEcCCCCcHHHHHHHHHHHhCCCEEEEECCCCee---cCHHHHHHHHH-------cCCCEE---
Confidence            8999998   58888888  678888888899999999999999999999   99999985430       111112   


Q ss_pred             CChhHHHHHHHHHhCCCchHHHhhcCccccCCCCCCCccceEEeCCcHHHHHHHHHHcCCchhhhhhhcccCCCCCcccc
Q psy11832        386 GDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNEN  465 (494)
Q Consensus       386 g~~~~~~~~L~~~lg~~~~~~~l~~~~~~~~f~~~~~~~Dv~~lgdcD~~~~~l~~~lgW~~el~~l~~~~~~~~~~~~~  465 (494)
                                            ++|+++....+               ..             +.-.++.+++++|+..+
T Consensus       251 ----------------------~IN~e~~~~~~---------------~~-------------~~~~~~~~~~~~~~~~~  280 (323)
T d1j8fa_         251 ----------------------LINKEKAGQSD---------------PF-------------LGMIMGLGGGMDFDSKK  280 (323)
T ss_dssp             ----------------------EEESSCCCCCC---------------HH-------------HHHHHHHHTCCCSSSTT
T ss_pred             ----------------------EEECCCCCCCC---------------cc-------------chhhccccccccccccC
Confidence                                  33444322211               11             11235678889999999


Q ss_pred             ccccceeccccchhHHHHHHHhccCccc
Q psy11832        466 NVRDVFLEGDCDSGCQKLADMLGWGKDI  493 (494)
Q Consensus       466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (494)
                      ++|||+++||||.+|.+||++|||+.|+
T Consensus       281 ~~~D~~~~gdcd~~~~~l~~~lgw~~e~  308 (323)
T d1j8fa_         281 AYRDVAWLGECDQGCLALAELLGWKKEL  308 (323)
T ss_dssp             CCSEEEEESCHHHHHHHHHHHTTCHHHH
T ss_pred             CcceEEEccCHHHHHHHHHHHcCCHHHH
Confidence            9999999999999999999999998775

>d1q1aa_ c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: Hst2
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=6.5e-32  Score=269.01  Aligned_cols=186  Identities=25%  Similarity=0.311  Sum_probs=146.0

Q ss_pred             ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCC-CCCCc
Q psy11832        231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGR-MGITL  308 (494)
Q Consensus       231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~-~~~p~  308 (494)
                      +.+|+..|.+. .|+++|.+.++|||||||||++||.++++|+|+|||+.+.+|++|++.|+.+.++..+.... ...|.
T Consensus        86 ~~~Pn~~H~~L~~L~~~g~~~~viTQNIDgLh~~AG~~~~~v~elHGs~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~p~  165 (289)
T d1q1aa_          86 NFRPSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPIKDFVK  165 (289)
T ss_dssp             SCCCCHHHHHHHHHHHTTCEEEEEECCSSCHHHHTTCCGGGEEETTEEEEEEEETTTCCEECHHHHHHHHTCSSCCSCCB
T ss_pred             cCCCchhHHHHHHHHhcCCceEEEeeccCCchhccCCcccchhhccccceeeeecCCCccCCHHHHHHHhhhccccccCc
Confidence            45788888765 68889999999999999999999999999999999999999999999999998887765433 23577


Q ss_pred             cCCCCCCCCCCCCcEEe--ccCChhHHHhhh-------------cCCCCCCeEEEeccccccCCCCcchhhhcccCCCCC
Q psy11832        309 GLHAGGLSSIPGGAEVF--SALCLEFGVHSA-------------SAPPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGF  373 (494)
Q Consensus       309 c~~C~g~~~i~~p~ivf--e~l~~~~~~~~~-------------~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~~g~~~  373 (494)
                      |+.|+|   +.||+|||  |.+|..+...+.             ....+||+||||||||.|   +|++.|+..+.    
T Consensus       166 c~~Cgg---~lrP~vv~FGE~lp~~~~~~~~~~~e~~~~~~~~~~~~~~aDlllviGTSl~V---~Pa~~l~~~a~----  235 (289)
T d1q1aa_         166 CDVCGE---LVKPAIVFFGEDLPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAV---YPFASLPEEIP----  235 (289)
T ss_dssp             CTTTCC---BEEEEECCBTSBCCHHHHHHHHHHHHHHHHHHHC----CCCCEEEEESCCCCE---ETTTHHHHHSC----
T ss_pred             cccccc---cccCceeeccccCChHHHHHHHHHHHHHHHHHHHHhhcccCCEEEEECCCcee---cCHHHHHHHHH----
Confidence            888888   58888888  567776665442             246799999999999999   99998875431    


Q ss_pred             CCCCCcccEEEeCChhHHHHHHHHHhCCCchHHHhhcCccccCCCCCCCccceEEeCCcHHHHHHHHHHcCCchhhhhhh
Q psy11832        374 DNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLL  453 (494)
Q Consensus       374 ~~~~~~~dl~i~g~~~~~~~~L~~~lg~~~~~~~l~~~~~~~~f~~~~~~~Dv~~lgdcD~~~~~l~~~lgW~~el~~l~  453 (494)
                         ....-                         .++|.++..++....+..|+++.||||+++.+|++.|||++||++|+
T Consensus       236 ---~~~~~-------------------------viIN~e~~~~~~~~~~~~Dl~I~g~~~~vl~~L~~~LGw~~~~~~~~  287 (289)
T d1q1aa_         236 ---RKVKR-------------------------VLCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEELGWQEDFEKIL  287 (289)
T ss_dssp             ---TTSEE-------------------------EEESSSCCTHHHHSCCTTCEEECCCHHHHHHHHHHHHTCHHHHHHHH
T ss_pred             ---cCCCE-------------------------EEEeCCCCCCcccccCCcCEEEeCCHHHHHHHHHHHcCChHHHHHHh
Confidence               01111                         23444443333334577899999999999999999999999999987


Q ss_pred             c
Q psy11832        454 G  454 (494)
Q Consensus       454 ~  454 (494)
                      .
T Consensus       288 ~  288 (289)
T d1q1aa_         288 T  288 (289)
T ss_dssp             T
T ss_pred             h
Confidence            3

>d1yc5a1 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: NAD-dependent deacetylase NpdA
species: Thermotoga maritima [TaxId: 2336]

Probab=99.96  E-value=1.4e-31  Score=260.57  Aligned_cols=160  Identities=18%  Similarity=0.210  Sum_probs=135.6

Q ss_pred             ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832        231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG  309 (494)
Q Consensus       231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c  309 (494)
                      +.+|+..|... +|+++|++.++|||||||||++||  +++|+|+|||+++.+|+.|++.|+.+.+...+..  ...|.|
T Consensus        73 ~~~P~~~H~~L~~l~~~~~~~~viTQNiDgLh~~AG--~~~v~elHG~l~~~~C~~c~~~~~~~~~~~~~~~--~~~p~c  148 (245)
T d1yc5a1          73 QAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAG--SKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLES--SDVPLC  148 (245)
T ss_dssp             GCCCCHHHHHHHHHHHTTSCSEEEECCCSCHHHHTT--CSCEEETTEEEEEEEETTTCCEEEHHHHHHHTTT--CSSCBC
T ss_pred             hhhhhhhhHHHHHHHhcCCCceEeecccchHHHHcC--CccccccccccceeeecccCCCccHHHHhhhhhc--ccCCCc
Confidence            45677777655 788899999999999999999999  6799999999999999999999999988776543  345889


Q ss_pred             CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhccc--CCC-------CCCCCCC
Q psy11832        310 LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLS--EGL-------GFDNENN  378 (494)
Q Consensus       310 ~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~--~g~-------~~~~~~~  378 (494)
                      +.|+|   ++||+|||  |.+|..++..+.+..++||++|||||||.|   +|+++++..+  .|.       +.+..+.
T Consensus       149 ~~Cgg---~lrP~Vv~FgE~lp~~~~~~a~~~~~~~DlllviGTSl~V---~p~~~l~~~a~~~g~~~i~IN~~~t~~d~  222 (245)
T d1yc5a1         149 DDCNS---LIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVV---YPAAELPLITVRSGGKLVIVNLGETPFDD  222 (245)
T ss_dssp             TTTCC---BEEEEECCBTSBCCHHHHHHHHHHHHHCSEEEEESCCSCE---ETGGGHHHHHHHHTCEEEEECSSCCTTGG
T ss_pred             cccCC---cccCcEEEccccCCHHHHHHHHHHhhcCCEEEEECCCeEE---echhhhhHHHHHcCCeEEEECCCCCCCCc
Confidence            99998   58888888  667788888888889999999999999999   9999987654  222       3344567


Q ss_pred             cccEEEeCChhHHHHHHHHHhC
Q psy11832        379 VRDVFLEGDCDSGCQKLADMLG  400 (494)
Q Consensus       379 ~~dl~i~g~~~~~~~~L~~~lg  400 (494)
                      .+|+.|.|++++++++|+++||
T Consensus       223 ~~d~~i~g~~~e~l~~l~~~lg  244 (245)
T d1yc5a1         223 IATLKYNMDVVEFARRVMEEGG  244 (245)
T ss_dssp             GCSEEECSCHHHHHHHHHHHHT
T ss_pred             ceeEEEeCCHHHHHHHHHHHcC
Confidence            7999999999999999999998

>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: NAD-dependent deacetylase CobB
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=4.7e-31  Score=255.30  Aligned_cols=155  Identities=14%  Similarity=-0.011  Sum_probs=119.1

Q ss_pred             cccccccccc-ccccc-ccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832        232 GTSLVVQPFC-SLVDK-TNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG  309 (494)
Q Consensus       232 ~~p~~~h~~a-~l~~~-~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c  309 (494)
                      .+|+..|... +|+++ |.+.++|||||||||++||  +++|+|+|||+++.+|+.|++.|+....   +  .....|.|
T Consensus        65 ~~Pn~~H~~l~~l~~~~g~~~~viTQNIDgLh~~AG--~~~v~ElHGsl~~~~C~~C~~~~~~~~~---~--~~~~~~~c  137 (235)
T d1s5pa_          65 IQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAG--NTNVIHMHGELLKVRCSQSGQVLDWTGD---V--TPEDKCHC  137 (235)
T ss_dssp             CCCCHHHHHHHHHHHHHGGGEEEEESCCSSHHHHHT--CCSCEETTEEEEEEEETTTCCEEECCSC---C--CSSCCC--
T ss_pred             cCCcHHHHHHHHHHHHhccceeEeeccchHHHHhcC--CchhhhhhCcccEEEECCCCCccccccc---c--cccccccc
Confidence            4688888766 58776 8888999999999999999  6799999999999999999999875431   1  12345778


Q ss_pred             CCCCCCCCCCCCcEEeccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhccc--CCC-------CCCCCCCcc
Q psy11832        310 LHAGGLSSIPGGAEVFSALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLS--EGL-------GFDNENNVR  380 (494)
Q Consensus       310 ~~C~g~~~i~~p~ivfe~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~--~g~-------~~~~~~~~~  380 (494)
                      +.|+|   +.||+||||+++.+....+.+.+++||++|||||||.|   +|++.++..+  .|.       +.+..+..+
T Consensus       138 ~~Cgg---~lrP~VV~FGE~~~~~~~~~~~~~~aDlllviGTSl~V---~pa~~l~~~a~~~g~~iiiIN~~~t~~~~~~  211 (235)
T d1s5pa_         138 CQFPA---PLRPHVVWFGEMPLGMDEIYMALSMADIFIAIGTSGHV---YPAAGFVHEAKLHGAHTVELNLEPSQVGNEF  211 (235)
T ss_dssp             --------CEEEEECCTTSCCSSHHHHHHHHHHCSEEEEESCCTTE---ETGGGHHHHHHHTTCEEEEEESSSCC---CC
T ss_pred             ccccc---ccccceeecCCCChhHHHHHHHHHhCCEEEEEccCCcc---cCHHHHHHHHHHcCCeEEEECCCCCCCCCcc
Confidence            99988   58899999766555567778888899999999999999   9999998764  333       344556788


Q ss_pred             cEEEeCChhHHHHHHHHHh
Q psy11832        381 DVFLEGDCDSGCQKLADML  399 (494)
Q Consensus       381 dl~i~g~~~~~~~~L~~~l  399 (494)
                      |+.|.|++++++++|+++|
T Consensus       212 ~~~i~g~a~e~l~~l~~~l  230 (235)
T d1s5pa_         212 AEKYYGPASQVVPEFVEKL  230 (235)
T ss_dssp             SEEEESCHHHHHHHHHHHH
T ss_pred             cEEEeCCHHHHHHHHHHHH
Confidence            9999999999999998876

>d1m2ka_ c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: AF1676, Sir2 homolog (Sir2-AF1?)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.95  E-value=2.3e-29  Score=245.30  Aligned_cols=155  Identities=15%  Similarity=0.207  Sum_probs=126.8

Q ss_pred             cccccccc-cccccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCccC
Q psy11832        232 GTSLVVQP-FCSLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGL  310 (494)
Q Consensus       232 ~~p~~~h~-~a~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c~  310 (494)
                      ..|+..|. +++|+++|++.++|||||||||++||  +++|+|+|||+++.+|+.|++.|+.+....     ..+.|.|+
T Consensus        74 ~~P~~~H~~L~~L~~~g~~~~iiTqNiDgL~~~aG--~~~v~elHG~l~~~~C~~c~~~~~~~~~~~-----~~~~p~C~  146 (249)
T d1m2ka_          74 AQPNKAHQAFAELERLGVLKCLITQNVDDLHERAG--SRNVIHLHGSLRVVRCTSCNNSFEVESAPK-----IPPLPKCD  146 (249)
T ss_dssp             CCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTT--CCSEEETTEEEEEEEESSSSCEEECSSCCC-----SSSCCBCS
T ss_pred             cCCcchhHHHHHHHHcCCceEEEeeeeCCHHHhcC--CceEEEeccchhheeeccCCCccccccccc-----CCCCCCcc
Confidence            45666666 45788899999999999999999999  688999999999999999999998764321     23468899


Q ss_pred             CCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhccc--CCC-------CCCCCCCc
Q psy11832        311 HAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLS--EGL-------GFDNENNV  379 (494)
Q Consensus       311 ~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~--~g~-------~~~~~~~~  379 (494)
                      .|+|   +.||+|||  |.+|..++..+.+.+++||++||+|||++|   +|++.++..+  .|.       +.+..+..
T Consensus       147 ~Cgg---~lrP~Vv~FgE~lp~~~~~~a~~~~~~~DlllviGTSl~V---~pa~~l~~~a~~~g~~~i~IN~~~t~~d~~  220 (249)
T d1m2ka_         147 KCGS---LLRPGVVWAGEMLPPDVLDRAMREVERADVIIVAGTSAVV---QPAASLPLIVKQRGGAIIEINPDETPLTPI  220 (249)
T ss_dssp             SSSS---BEEEEECCTTSCCCHHHHHHHHHHHHHCSEEEEESCCSCS---TTGGGHHHHHHHTTCEEEEECSSCCTTGGG
T ss_pred             cCCC---EeccceeeccccCchHHHHHHHHhcccCCEEEEECCCCee---eehhhHHHHHHHcCCeEEEECCCCCCCCCc
Confidence            9988   58888888  567788888888889999999999999999   8988887643  233       23444567


Q ss_pred             ccEEEeCChhHHHHHHHHHh
Q psy11832        380 RDVFLEGDCDSGCQKLADML  399 (494)
Q Consensus       380 ~dl~i~g~~~~~~~~L~~~l  399 (494)
                      +|+.|.|++++++++|++.|
T Consensus       221 ~d~~i~g~a~e~L~~l~~~l  240 (249)
T d1m2ka_         221 ADYSLRGKAGEVMDELVRHV  240 (249)
T ss_dssp             CSEEECSCHHHHHHHHHHHH
T ss_pred             ccEEEECCHHHHHHHHHHHH
Confidence            89999999999999987543

>d2b4ya1 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirtuin-5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: NAD-dependent deacetylase sirtuin-5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.5e-29  Score=247.41  Aligned_cols=155  Identities=17%  Similarity=0.167  Sum_probs=118.2

Q ss_pred             cccccccccc-ccc----ccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHH------Hh---
Q psy11832        232 GTSLVVQPFC-SLV----DKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWM------KE---  297 (494)
Q Consensus       232 ~~p~~~h~~a-~l~----~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~------~~---  297 (494)
                      .+|+..|... .|+    ++|++.++|||||||||++||  .++|+|+|||+++.+|++|++.++....      ..   
T Consensus        77 ~~P~~~h~~l~~l~~~~~~~g~~~~viTQNIDgLh~~aG--~~~vielHG~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~  154 (267)
T d2b4ya1          77 KEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAG--TKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGA  154 (267)
T ss_dssp             CCCCHHHHHHHHHHHHHHTTTCEEEEEECCSSCHHHHHT--CCSEEETTEEEEEEEETTTCCEEECCCSSSSGGGTTCCC
T ss_pred             cCcchHHHHHHHHHHHHhhcCceeEEEecchHHHHHhCC--CCceEEEeccccEEEECCCCCcccccccccchhhhccCC
Confidence            3455555533 444    578999999999999999999  6899999999999999999987642211      00   


Q ss_pred             --------hhccCCCCCCccC--CCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhh
Q psy11832        298 --------GNLLGRMGITLGL--HAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLL  365 (494)
Q Consensus       298 --------~i~~~~~~~p~c~--~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~  365 (494)
                              .+....  .|.|+  .|+|   ++||+|||  |.+|..+++.+.+..++||+||||||||.|   +|++.++
T Consensus       155 ~~~~~~~~~~~~~~--~p~C~~~~Cgg---~lrP~VV~FgE~~p~~~~~~a~~~~~~aDlllviGTSl~V---~pa~~l~  226 (267)
T d2b4ya1         155 PEPGTQDASIPVEK--LPRCEEAGCGG---LLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVV---YPAAMFA  226 (267)
T ss_dssp             CSTTCCCCCCCGGG--SCBCCSTTTCC---BEEEEECCTTCCCCHHHHHHHHHHHHHCSEEEEESCCSCS---TTGGGHH
T ss_pred             CCcchhhhhcchhh--cccccccCCCC---EecCcEEEcCCcCCHHHHHHHHHhhhhCCeEEEECCCCee---cCHHHHH
Confidence                    011112  34454  4777   58899888  677888888899999999999999999999   9999987


Q ss_pred             ccc--CCC-------CCCCCCCcccEEEeCChhHHHHHHH
Q psy11832        366 GLS--EGL-------GFDNENNVRDVFLEGDCDSGCQKLA  396 (494)
Q Consensus       366 ~~~--~g~-------~~~~~~~~~dl~i~g~~~~~~~~L~  396 (494)
                      ..+  .|.       +.+..+..+|+.|.|++++++|+|+
T Consensus       227 ~~a~~~g~~vv~IN~~~t~~d~~~d~~i~g~~~~vL~~l~  266 (267)
T d2b4ya1         227 PQVAARGVPVAEFNTETTPATNRFRFHFQGPCGTTLPEAL  266 (267)
T ss_dssp             HHHHHTTCCEEEEESSCCTTGGGSSEEEESCHHHHHHHHT
T ss_pred             HHHHHcCCcEEEEeCCCCCCCCccCEEEeCCHHHHHHHHh
Confidence            654  233       3344557789999999999999985

>d1ma3a_ c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: AF0112, Sir2 homolog (Sir2-AF2)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.92  E-value=1.5e-26  Score=225.35  Aligned_cols=159  Identities=18%  Similarity=0.186  Sum_probs=127.0

Q ss_pred             ccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCccCC
Q psy11832        233 TSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGLH  311 (494)
Q Consensus       233 ~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c~~  311 (494)
                      +|+..|... .|+.++++.+||||||||||++||  .++|+|+|||++..+|+.|.+.+..+.+....... ...|.|+.
T Consensus        77 ~P~~~h~~l~~l~~~~~~~~viTqNiDgL~~kaG--~~~v~e~hG~~~~~~C~~~~~~~~~~~~~~~~~~~-~~~~~c~~  153 (252)
T d1ma3a_          77 EPNPAHYAIAELERMGIVKAVITQNIDMLHQRAG--SRRVLELHGSMDKLDCLDCHETYDWSEFVEDFNKG-EIPRCRKC  153 (252)
T ss_dssp             CCCHHHHHHHHHHHTTSEEEEEESCCSCHHHHHT--CCSEEETTEEEEEEEETTTCCEEEGGGTHHHHHTT-CCCCCTTT
T ss_pred             CCCHHHHHHHHHhhcCCccEEEecchhHHHHhcC--CcchhhhcCCcceeEEcccccccccchhhhhhhcC-CCCCCccc
Confidence            455555444 677888889999999999999999  57999999999999999999998887765554332 34577888


Q ss_pred             CCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhccc--CCC-------CCCCCCCcc
Q psy11832        312 AGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLS--EGL-------GFDNENNVR  380 (494)
Q Consensus       312 C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~--~g~-------~~~~~~~~~  380 (494)
                      |+|   +.||+|||  |.++......+.+...+||++|++|||+.|   +|++.++..+  .|.       +.+..+..+
T Consensus       154 cgg---~lrP~vv~fgE~~~~~~~~~~~~~~~~~dl~LviGTSl~V---~p~~~~~~~a~~~~~~~i~IN~~~~~~d~~~  227 (252)
T d1ma3a_         154 GSY---YVKPRVVLFGEPLPQRTLFEAIEEAKHCDAFMVVGSSLVV---YPAAELPYIAKKAGAKMIIVNAEPTMADPIF  227 (252)
T ss_dssp             CCS---CEEEEECCBTSBCCHHHHHHHHHHHHHCSEEEEESCCSCE---ETGGGHHHHHHHHTCEEEEEESSCCTTGGGC
T ss_pred             ccc---cCCCeEEECCCcCchHHHHHHHHHhhCCCeEEEecCCcee---eechHHHHHHHHcCCeEEEECCCCCCCCCce
Confidence            888   58888887  567777777888888999999999999999   7777776543  222       334455778


Q ss_pred             cEEEeCChhHHHHHHHHHhC
Q psy11832        381 DVFLEGDCDSGCQKLADMLG  400 (494)
Q Consensus       381 dl~i~g~~~~~~~~L~~~lg  400 (494)
                      |+.|.|++++++++|+++|.
T Consensus       228 d~~i~g~~~evl~~l~~~l~  247 (252)
T d1ma3a_         228 DVKIIGKAGEVLPKIVEEVK  247 (252)
T ss_dssp             SEEEESCHHHHHHHHHHHHH
T ss_pred             eEEEECCHHHHHHHHHHHHH
Confidence            99999999999999987653

>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Oxalyl-CoA decarboxylase
species: Oxalobacter formigenes [TaxId: 847]

Probab=87.17  E-value=0.22  Score=42.91  Aligned_cols=45  Identities=9%  Similarity=-0.034  Sum_probs=31.9

Q ss_pred             hHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccccc
Q psy11832        191 VDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVV  237 (494)
Q Consensus       191 ~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~  237 (494)
                      ..+++||++|+|||.+...........+  .-.++++|.|+.+|...
T Consensus        74 ~~l~~aDlii~vG~~~~~~~~~~~~~~~--~~~~~kvI~Id~d~~~i  118 (175)
T d2ji7a1          74 FALAQCDVCVLIGARLNWLMQHGKGKTW--GDELKKYVQIDIQANEM  118 (175)
T ss_dssp             HHHHHCSEEEEESCCSSGGGGGGCSGGG--TTSCCEEEEEESCGGGT
T ss_pred             ceeecccceeeeeccCCccccccccccc--CCccceEEEEeccchhh
Confidence            3467899999999999755554444443  12357789999888765

>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Acetohydroxyacid synthase catalytic subunit
species: Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]

Probab=85.84  E-value=0.35  Score=41.79  Aligned_cols=47  Identities=19%  Similarity=0.159  Sum_probs=35.8

Q ss_pred             HHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccc
Q psy11832        188 RVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQ  238 (494)
Q Consensus       188 ~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h  238 (494)
                      .+...+++||++|++||.+.-........ +   .+++++|.|+.+|....
T Consensus        76 ~~~~~~~~aDlil~lG~~l~~~~~~~~~~-~---~~~~kiI~Id~d~~~~~  122 (179)
T d1ybha1          76 YANYAVEHSDLLLAFGVRFDDRVTGKLEA-F---ASRAKIVHIDIDSAEIG  122 (179)
T ss_dssp             HHHHHHHHCSEEEEESCCCCHHHHSSGGG-T---TTTSEEEEEESCTTTTT
T ss_pred             HHHHHHHhhhhhhhccccccccccccccc-c---CCCCeEEEEeCcccccc
Confidence            44567788999999999998776554422 2   36889999999998764

>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Carboxyethylarginine synthase
species: Streptomyces clavuligerus [TaxId: 1901]

Probab=84.21  E-value=0.38  Score=41.30  Aligned_cols=46  Identities=17%  Similarity=0.100  Sum_probs=33.0

Q ss_pred             HHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccccc
Q psy11832        188 RVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVV  237 (494)
Q Consensus       188 ~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~  237 (494)
                      .+.+.+++||++|+|||.+.......+-.    ..+++++|.|+.+|...
T Consensus        83 ~~~~~l~~aDlvl~vG~~~~~~~~~~~~~----~~~~~k~I~Id~d~~~i  128 (177)
T d2ihta1          83 ALQTMFAPVDLVLTVGYDYAEDLRPSMWQ----KGIEKKTVRISPTVNPI  128 (177)
T ss_dssp             HHHHHHTTCCEEEEETCCGGGCCCHHHHC----CSSCCEEEEEESSCCSC
T ss_pred             HHHHHhccCCceEEecccccccccccccc----cCCccceeEEcCCHHHh
Confidence            45678899999999999886433222221    24678899999888875

>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Pyruvate oxidase
species: Aerococcus viridans [TaxId: 1377]

Probab=82.94  E-value=0.47  Score=40.79  Aligned_cols=44  Identities=11%  Similarity=0.124  Sum_probs=31.8

Q ss_pred             HHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccccc
Q psy11832        188 RVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVV  237 (494)
Q Consensus       188 ~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~  237 (494)
                      .+.+.+++||++|+|||.+......   ..+   .+++++|.|+.+|...
T Consensus        78 ~~~~~l~~aDlvi~lG~~~~~~~~~---~~~---~~~~kiI~Id~d~~~i  121 (177)
T d2djia1          78 PANETILEADTVLFAGSNFPFSEVE---GTF---RNVDNFIQIDIDPAML  121 (177)
T ss_dssp             HHHHHHHHCSEEEEESCCCTTTTTT---TTT---TTCSEEEEEESCGGGT
T ss_pred             hhhhhhhccCceEEeeccCCCccce---ecc---ccccchheEEeccccc
Confidence            4556788999999999988543322   223   4678899999888764

>d1ovma1 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Indole-3-pyruvate decarboxylase
species: Enterobacter cloacae [TaxId: 550]

Probab=81.77  E-value=0.41  Score=40.49  Aligned_cols=46  Identities=17%  Similarity=0.190  Sum_probs=33.4

Q ss_pred             HHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccccc
Q psy11832        188 RVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVV  237 (494)
Q Consensus       188 ~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~  237 (494)
                      .+.+.++++|++|+|||++.-.....+...    .++.++|.|+.++...
T Consensus        89 ~~~~~i~~aDliL~iG~~l~~~~t~~~~~~----~~~~kiI~id~d~~~i  134 (161)
T d1ovma1          89 AVKEAIEGADTVLCVGTRFTDTLTAGFTHQ----LTPAQTIEVQPHAARV  134 (161)
T ss_dssp             HHHHHHHTSSEEEEESCCCCTTTTTTTCCC----CCTTTEEEECSSEEEE
T ss_pred             HHHHHHhcCCEEEEECCccccccccccccc----CCCceEEEEeCCHHHh
Confidence            456677899999999999876555554333    3677888888777654