Psyllid ID: psy11842

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160---
Protein Sequence
MLYEVLPRFLQEKVDIVRSEMVEAREYPKLGKVQFILVLIYALSLVAFQCLPRMSSILLEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAYIVSYIFSPGSFSYLKPMSLKYIMLAYNLFQTLFNAYIVSYNKN
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEcccccccHHHHHHHHHHHHHEEEEcccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHcEHHHHHcccc
Coil and Loop (DISEMBL)
MLYEVLPRFLQEKVDIVRSEMVeareypklgkVQFILVLIYALSLVAFQclprmssilledetvdnwflmQYQWPVITILVLYLAFVLKigpaymqnrkpMSLKYIMLAYNLFQTLFNAYIVSYIfspgsfsylkpmsLKYIMLAYNLFQTLFNAYIVSYNKN
Flexible Loop (DISEMBL)
mlyevlprflqekvdIVRSEMVeareypklgKVQFILVLIYALSLVAFQCLPRMSSILLEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAYIVSYIFSPGSFSYLKPMSLKYIMLAYNLFQTLFNAYIVSYNKN
Low Complexity Region (SEG)
MLYEVLPRFLQEKVDIVRSEMVEAREYPKLGKVQFILVLIYALSLVAFQCLPRMSSILLEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAYIVSYIFSPGSFSYLKPMSLKYIMLAYNLFQTLFNAYIVSYNKN
Disordered region (IsUnstruct)
**YEVLPRFLQEKVDIVRSEMVEAREYPKLGKVQFILVLIYALSLVAFQCLPRMSSILLEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAYIVSYIFSPGSFSYLKPMSLKYIMLAYNLFQTLFNAYIVSY***
Disordered Region (DISOPRED)
*LYEVLPRFLQEKVDIVRSEMVEAREYPKLGKVQFILVLIYALSLVAFQCLPRMSSILLEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAYIVSYIFSPGSFSYLKPMSLKYIMLAYNLFQTLFNAYIVSYNKN
Disordered Region (DISEMBL)
MLYEVLPRFLQEKVDIVRSEMVEAREYPKLGKVQFILVLIYALSLVAFQCLPRMSSILLEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAYIVSYIFSPGSFSYLKPMSLKYIMLAYNLFQTLFNAYIVSYNKN
Disordered Region (DISPRO)
MLYEVLPRFLQEKVDIVRSEMVEAREYPKLGKVQFILVLIYALSLVAFQCLPRMSSILLEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAYIVSYIFSPGSFSYLKPMSLKYIMLAYNLFQTLFNAYIVSYNK*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLYEVLPRFLQEKVDIVRSEMVEAREYPKLGKVQFILVLIYALSLVAFQCLPRMSSILLEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAYIVSYIFSPGSFSYLKPMSLKYIMLAYNLFQTLFNAYIVSYNKN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	163	2.2.26 [Sep-21-2011]
D4ADY9	281	Elongation of very long c	yes	N/A	0.380	0.220	0.467	2e-08
Q9GZR5	314	Elongation of very long c	yes	N/A	0.411	0.213	0.382	6e-08
Q3S8M4	314	Elongation of very long c	yes	N/A	0.411	0.213	0.382	8e-08
Q95K73	314	Elongation of very long c	N/A	N/A	0.411	0.213	0.382	8e-08
Q9EQC4	312	Elongation of very long c	yes	N/A	0.411	0.214	0.382	3e-07
A1L3X0	281	Elongation of very long c	no	N/A	0.380	0.220	0.419	4e-07
A0JNC4	281	Elongation of very long c	yes	N/A	0.374	0.217	0.426	8e-07
Q9D2Y9	281	Elongation of very long c	no	N/A	0.380	0.220	0.435	1e-06
Q32NI8	295	Elongation of very long c	N/A	N/A	0.374	0.206	0.419	4e-05
Q5M8U1	295	Elongation of very long c	no	N/A	0.374	0.206	0.419	6e-05

>sp|D4ADY9|ELOV7_RAT Elongation of very long chain fatty acids protein 7 OS=Rattus norvegicus GN=Elovl7 PE=3 SV=1

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 36/62 (58%)

Query: 61  DETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAY 120
           D  V+NW LM    P   IL LY+ FV  +GP  M+NRKP  LK  M+ YN F  LF+ Y
Sbjct: 22  DPRVENWLLMSSPLPQTIILGLYVYFVTSLGPKLMENRKPFELKKAMITYNFFIVLFSVY 81

Query: 121 IV 122
           + 
Sbjct: 82  MC 83

Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: nEC: 8

>sp|Q9GZR5|ELOV4_HUMAN Elongation of very long chain fatty acids protein 4 OS=Homo sapiens GN=ELOVL4 PE=1 SV=1

 Score = 57.0 bits (136), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 1/68 (1%)

Query: 59  LEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFN 118
           + D+ V+NW LMQ  WP ++I  LYL FV  +GP +M++R+P  ++ +++ YN    L N
Sbjct: 32  IADKRVENWPLMQSPWPTLSISTLYLLFVW-LGPKWMKDREPFQMRLVLIIYNFGMVLLN 90

Query: 119 AYIVSYIF 126
            +I   +F
Sbjct: 91  LFIFRELF 98

Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs). Elongates C24:0 and C26:0 acyl-CoAs. Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum. May be implicated in docosahexaenoic acid (DHA) biosynthesis, which requires dietary consumption of the essential alpha-linolenic acid and a subsequent series of three elongation steps. May play a critical role in early brain and skin development.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q3S8M4|ELOV4_MACMU Elongation of very long chain fatty acids protein 4 OS=Macaca mulatta GN=ELOVL4 PE=3 SV=1

 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 1/68 (1%)

Query: 59  LEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFN 118
           + D+ V+NW LMQ  WP ++I  LYL FV  +GP +M++R+P  ++ +++ YN    L N
Sbjct: 32  IADKRVENWPLMQSPWPTLSISTLYLLFVW-LGPKWMKDREPFQMRLVLIIYNFGMVLLN 90

Query: 119 AYIVSYIF 126
            +I   +F
Sbjct: 91  FFIFRELF 98

Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs) (By similarity). Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum (By similarity). May play a critical role in early brain and skin development.

Macaca mulatta (taxid: 9544)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q95K73|ELOV4_MACFA Elongation of very long chain fatty acids protein 4 OS=Macaca fascicularis GN=ELOVL4 PE=2 SV=1

 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 1/68 (1%)

Query: 59  LEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFN 118
           + D+ V+NW LMQ  WP ++I  LYL FV  +GP +M++R+P  ++ +++ YN    L N
Sbjct: 32  IADKRVENWPLMQSPWPTLSISTLYLLFVW-LGPKWMKDREPFQMRLVLIIYNFGMVLLN 90

Query: 119 AYIVSYIF 126
            +I   +F
Sbjct: 91  FFIFRELF 98

Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs) (By similarity). Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum (By similarity). May play a critical role in early brain and skin development.

Macaca fascicularis (taxid: 9541)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q9EQC4|ELOV4_MOUSE Elongation of very long chain fatty acids protein 4 OS=Mus musculus GN=Elovl4 PE=1 SV=2

 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 1/68 (1%)

Query: 59  LEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFN 118
           + D+ V +W LMQ  WP I+I  LYL FV  +GP +M++R+P  ++ +++ YN    L N
Sbjct: 32  IADKRVADWPLMQSPWPTISISTLYLLFVW-LGPKWMKDREPFQMRLVLIIYNFGMVLLN 90

Query: 119 AYIVSYIF 126
            +I   +F
Sbjct: 91  LFIFRELF 98

Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs) (By similarity). Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum. May play a critical role in early brain and skin development.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|A1L3X0|ELOV7_HUMAN Elongation of very long chain fatty acids protein 7 OS=Homo sapiens GN=ELOVL7 PE=1 SV=1

 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 61  DETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAY 120
           D  V++W LM    P   +L  Y+ FV  +GP  M+NRKP  LK  M+ YN F  LF+ Y
Sbjct: 22  DPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRKPFELKKAMITYNFFIVLFSVY 81

Query: 121 IV 122
           + 
Sbjct: 82  MC 83

Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs, especially C18:3(n-3) acyl-CoAs and C18:3(n-6)-CoAs. Also active toward C20:4-, C18:0-, C18:1-, C18:2-and C16:0-CoAs, and weakly toward C20:0-CoA. Little or no activity toward C22:0-, C24:0-, or C26:0-CoAs.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|A0JNC4|ELOV7_BOVIN Elongation of very long chain fatty acids protein 7 OS=Bos taurus GN=ELOVL7 PE=2 SV=1

 Score = 53.1 bits (126), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 35/61 (57%)

Query: 61  DETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAY 120
           D  V++W LM    P   IL  Y+ FV  +GP  M+NRKP  LK +M+ YN    LF+ Y
Sbjct: 22  DPRVEDWLLMSSPLPQTIILGFYVYFVTSLGPKLMENRKPFELKKVMITYNFSIVLFSVY 81

Query: 121 I 121
           +
Sbjct: 82  M 82

Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q9D2Y9|ELOV7_MOUSE Elongation of very long chain fatty acids protein 7 OS=Mus musculus GN=Elovl7 PE=2 SV=1

 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 36/62 (58%)

Query: 61  DETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAY 120
           D  V+++ LM    P   IL LY+ FV  +GP  M+NRKP  LK  M+ YN F  LF+ Y
Sbjct: 22  DPRVEDYLLMSSPLPQTIILGLYVYFVTSLGPKLMENRKPFELKKAMITYNFFIVLFSVY 81

Query: 121 IV 122
           + 
Sbjct: 82  MC 83

Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q32NI8|ELOV5_XENLA Elongation of very long chain fatty acids protein 5 OS=Xenopus laevis GN=elovl5 PE=2 SV=1

 Score = 47.4 bits (111), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 60  EDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNA 119
           +D  V  W L+    P I    LYL F++  GP YMQNR+P+S + I++ YNL  TL + 
Sbjct: 19  KDPRVKGWLLLDNYVPTIFFTALYL-FIVWRGPKYMQNRQPVSCRSILVVYNLGLTLLSF 77

Query: 120 YI 121
           Y+
Sbjct: 78  YM 79

Condensing enzyme that catalyzes the synthesis of very long chain fatty acids.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q5M8U1|ELOV5_XENTR Elongation of very long chain fatty acids protein 5 OS=Xenopus tropicalis GN=elovl5 PE=2 SV=1

 Score = 46.6 bits (109), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)

Query: 60  EDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNA 119
           +D  V  W L+    P I    LYL F++  GP YMQNR P+S + I++ YNL  TL + 
Sbjct: 19  KDPRVRGWLLLDNYVPTILFTALYL-FIVWRGPKYMQNRPPVSCRGILVVYNLGLTLLSL 77

Query: 120 YI 121
           Y+
Sbjct: 78  YM 79

Condensing enzyme that catalyzes the synthesis of very long chain fatty acids.

Xenopus tropicalis (taxid: 8364)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	163
328699135	282	PREDICTED: elongation of very long chain	0.521	0.301	0.488	6e-16
193596491	273	PREDICTED: elongation of very long chain	0.453	0.271	0.506	7e-16
328699191	240	PREDICTED: elongation of very long chain	0.472	0.320	0.525	2e-15
328722384	264	PREDICTED: elongation of very long chain	0.472	0.291	0.525	3e-15
193676359	278	PREDICTED: elongation of very long chain	0.631	0.370	0.461	3e-15
239791051	278	ACYPI007931 [Acyrthosiphon pisum]	0.631	0.370	0.451	3e-14
195454024	322	GK12817 [Drosophila willistoni] gi|19417	0.380	0.192	0.580	1e-13
125773197	321	GA19958 [Drosophila pseudoobscura pseudo	0.380	0.193	0.564	4e-13
195158469	323	GL13809 [Drosophila persimilis] gi|19411	0.380	0.191	0.564	5e-13
194746321	325	GF18858 [Drosophila ananassae] gi|190628	0.380	0.190	0.548	1e-12

>gi|328699135|ref|XP_003240836.1| PREDICTED: elongation of very long chain fatty acids protein 4-like [Acyrthosiphon pisum]

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 1/86 (1%)

Query: 49  QCLPRMSSILLEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIML 108
           Q L      L+ DE VD+W LM   WP+++IL +YL FVLK+GP  M+NRKP+++KY+ML
Sbjct: 19  QLLKLFEKELVFDEVVDSWPLMSTPWPILSILSMYLLFVLKLGPNMMENRKPLNIKYMML 78

Query: 109 AYNLFQTLFNAYIVSYIF-SPGSFSY 133
            YN  QTL+N ++ S+ F +PG+  Y
Sbjct: 79  LYNAIQTLYNGWLTSWFFLTPGAVDY 104

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193596491|ref|XP_001942907.1| PREDICTED: elongation of very long chain fatty acids protein 4-like [Acyrthosiphon pisum]

 Score = 88.6 bits (218), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 57/75 (76%), Gaps = 1/75 (1%)

Query: 61  DETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAY 120
           D+ VD+W LM   WPVI+IL+ Y+ FVLK+GP  M+NR+P  +K+IM+ YN+ QT++N +
Sbjct: 28  DKNVDSWMLMSTPWPVISILIAYMLFVLKLGPKMMENREPFKIKHIMMGYNMVQTIYNIF 87

Query: 121 IVSYI-FSPGSFSYL 134
           I+S + F+PG + YL
Sbjct: 88  IISEVFFTPGIYRYL 102

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328699191|ref|XP_003240858.1| PREDICTED: elongation of very long chain fatty acids protein 1-like [Acyrthosiphon pisum]

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/78 (52%), Positives = 57/78 (73%), Gaps = 1/78 (1%)

Query: 58  LLEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLF 117
           L  D T+D+W L+   WP+  IL LYL FVLK+GP  M+NR+PM++KY++L YNL QT+F
Sbjct: 15  LKSDSTIDSWPLVNSPWPICIILALYLTFVLKLGPKLMKNREPMNIKYLILFYNLMQTMF 74

Query: 118 NAYIVSYIF-SPGSFSYL 134
           N+YI +Y F  P  F+Y+
Sbjct: 75  NSYIFAYQFIKPEIFNYI 92

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328722384|ref|XP_003247564.1| PREDICTED: elongation of very long chain fatty acids protein 4-like [Acyrthosiphon pisum]

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/78 (52%), Positives = 57/78 (73%), Gaps = 1/78 (1%)

Query: 58  LLEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLF 117
           L  D T+D+W L+   WP+  IL LYL FVLK+GP  M+NR+PM++KY++L YNL QT+F
Sbjct: 16  LKSDSTIDSWPLVNSPWPICIILALYLTFVLKLGPKLMKNREPMNIKYLILFYNLMQTMF 75

Query: 118 NAYIVSYIF-SPGSFSYL 134
           N+YI +Y F  P  F+Y+
Sbjct: 76  NSYIFAYQFIRPEIFNYI 93

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193676359|ref|XP_001952377.1| PREDICTED: elongation of very long chain fatty acids protein 4-like [Acyrthosiphon pisum]

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/104 (46%), Positives = 67/104 (64%), Gaps = 1/104 (0%)

Query: 47  AFQCLPRMSSILLEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYI 106
           A Q    +   L+ D+ VD+WFLM+   PV +I+ +YL F+LKIGP  M+NR+P  LK+I
Sbjct: 14  ANQFFNTLEKELVFDDEVDSWFLMRSPLPVFSIVAVYLLFILKIGPNMMKNREPYRLKHI 73

Query: 107 MLAYNLFQTLFNAYIVSYI-FSPGSFSYLKPMSLKYIMLAYNLF 149
           ML YNLFQT +NA+I+ +I F+PG  S +   S   I  + N F
Sbjct: 74  MLVYNLFQTTYNAFILYWIFFTPGGLSNIWNYSCHPIERSKNTF 117

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|239791051|dbj|BAH72041.1| ACYPI007931 [Acyrthosiphon pisum]

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 1/104 (0%)

Query: 47  AFQCLPRMSSILLEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYI 106
           A Q    +   L+ D+ VD+WFLM+   PV +I+ +YL F+LKIGP  M+NR+P  LK+I
Sbjct: 14  ANQFFNTLEKELVFDDEVDSWFLMRSPLPVFSIVAVYLLFILKIGPNMMKNREPYRLKHI 73

Query: 107 MLAYNLFQTLFNAYIVSYI-FSPGSFSYLKPMSLKYIMLAYNLF 149
           ML YNLFQT +NA+I+ +I F+P   S +   S   I  + N F
Sbjct: 74  MLVYNLFQTTYNAFILYWIFFTPRGLSNIWNYSCHPIERSKNTF 117

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195454024|ref|XP_002074051.1| GK12817 [Drosophila willistoni] gi|194170136|gb|EDW85037.1| GK12817 [Drosophila willistoni]

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/62 (58%), Positives = 48/62 (77%)

Query: 61  DETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAY 120
           DETVD+WFLM    PV+T++++YLAFVLKIGP YM+NRKP  LK IM+ YN FQ  ++ +
Sbjct: 20  DETVDSWFLMSSPAPVVTVVLVYLAFVLKIGPEYMKNRKPKDLKRIMVLYNAFQVCYSIW 79

Query: 121 IV 122
           + 
Sbjct: 80  MC 81

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|125773197|ref|XP_001357857.1| GA19958 [Drosophila pseudoobscura pseudoobscura] gi|54637590|gb|EAL26992.1| GA19958 [Drosophila pseudoobscura pseudoobscura]

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 47/62 (75%)

Query: 61  DETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAY 120
           DETVD+WFLM    PV  +++LYLAF+LKIGP +M+NRKPM LK IM+ YN FQ  ++ +
Sbjct: 20  DETVDSWFLMSSPAPVFGVVLLYLAFILKIGPEFMKNRKPMDLKRIMVFYNAFQVCYSIW 79

Query: 121 IV 122
           + 
Sbjct: 80  MC 81

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195158469|ref|XP_002020108.1| GL13809 [Drosophila persimilis] gi|194116877|gb|EDW38920.1| GL13809 [Drosophila persimilis]

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 47/62 (75%)

Query: 61  DETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAY 120
           DETVD+WFLM    PV  +++LYLAF+LKIGP +M+NRKPM LK IM+ YN FQ  ++ +
Sbjct: 20  DETVDSWFLMSSPAPVFGVVLLYLAFILKIGPEFMKNRKPMDLKRIMVFYNAFQVCYSIW 79

Query: 121 IV 122
           + 
Sbjct: 80  MC 81

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194746321|ref|XP_001955629.1| GF18858 [Drosophila ananassae] gi|190628666|gb|EDV44190.1| GF18858 [Drosophila ananassae]

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/62 (54%), Positives = 47/62 (75%)

Query: 61  DETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAY 120
           DETVD+WFLM     V+ ++++YLAFVLKIGP YM+NRKPM LK +M+ YN FQ  ++ +
Sbjct: 20  DETVDSWFLMSSPTAVVGVVLVYLAFVLKIGPEYMKNRKPMDLKRVMVFYNAFQVCYSIW 79

Query: 121 IV 122
           + 
Sbjct: 80  MC 81

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	163
FB|FBgn0260942	322	bond "james bond" [Drosophila	0.374	0.189	0.606	8e-17
FB|FBgn0034382	263	CG18609 [Drosophila melanogast	0.325	0.201	0.490	1.3e-10
UNIPROTKB|F1SKV9	281	ELOVL7 "Uncharacterized protei	0.447	0.259	0.418	1.7e-10
UNIPROTKB|F1SKV8	284	ELOVL7 "Uncharacterized protei	0.447	0.257	0.418	1.7e-10
UNIPROTKB|Q9GZR5	314	ELOVL4 "Elongation of very lon	0.441	0.229	0.378	1.8e-10
RGD|1310560	281	Elovl7 "ELOVL fatty acid elong	0.447	0.259	0.418	2.2e-10
UNIPROTKB|Q3S8M4	314	ELOVL4 "Elongation of very lon	0.441	0.229	0.378	2.4e-10
UNIPROTKB|Q95K73	314	ELOVL4 "Elongation of very lon	0.441	0.229	0.378	2.4e-10
UNIPROTKB|Q2KJD9	299	ELOVL5 "Elongation of very lon	0.368	0.200	0.393	3.7e-10
RGD|1305630	314	Elovl4 "ELOVL fatty acid elong	0.441	0.229	0.364	6.7e-10

FB|FBgn0260942 bond "james bond" [Drosophila melanogaster (taxid:7227)]

 Score = 208 (78.3 bits), Expect = 8.0e-17, P = 8.0e-17
 Identities = 37/61 (60%), Positives = 49/61 (80%)

Query:    61 DETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAY 120
             DETVD+WFLM    PV+ ++++YLAFVLKIGP YM+NRKPM LK IM+ YN FQ L++ +
Sbjct:    20 DETVDSWFLMSSPMPVVAVVLVYLAFVLKIGPEYMKNRKPMDLKRIMVFYNAFQVLYSIW 79

Query:   121 I 121
             +
Sbjct:    80 M 80

GO:0016021 "integral to membrane" evidence=IEA

GO:0000915 "cytokinesis, actomyosin contractile ring assembly" evidence=IMP

GO:0051225 "spindle assembly" evidence=IMP

GO:0007111 "cytokinesis after meiosis II" evidence=IMP

GO:0007110 "cytokinesis after meiosis I" evidence=IMP

GO:0007112 "male meiosis cytokinesis" evidence=IMP

GO:0000212 "meiotic spindle organization" evidence=IMP

FB|FBgn0034382 CG18609 [Drosophila melanogaster (taxid:7227)]

 Score = 151 (58.2 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 26/53 (49%), Positives = 35/53 (66%)

Query:    74 WPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAYIVSYIF 126
             WP+  IL+ YL FVLK+G  +M+NRKP  LK ++  YNLFQ L+N      +F
Sbjct:    22 WPITLILIAYLLFVLKLGKIFMRNRKPYDLKTVLKVYNLFQVLYNGLYFGMVF 74

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1SKV9 ELOVL7 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 151 (58.2 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 31/74 (41%), Positives = 41/74 (55%)

Query:    61 DETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAY 120
             D  V++W LM    P   IL LY+ FV  +GP +M+NRKP  LK  M+ YN F  LF+ Y
Sbjct:    22 DPRVEDWLLMSSPLPQTIILGLYVYFVTSLGPKFMENRKPFELKKAMITYNFFIVLFSMY 81

Query:   121 IV-SYIFSPGSFSY 133
             I   ++ S     Y
Sbjct:    82 ICYEFVMSGWGTGY 95

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1SKV8 ELOVL7 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 151 (58.2 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 31/74 (41%), Positives = 41/74 (55%)

Query:    61 DETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAY 120
             D  V++W LM    P   IL LY+ FV  +GP +M+NRKP  LK  M+ YN F  LF+ Y
Sbjct:    22 DPRVEDWLLMSSPLPQTIILGLYVYFVTSLGPKFMENRKPFELKKAMITYNFFIVLFSMY 81

Query:   121 IV-SYIFSPGSFSY 133
             I   ++ S     Y
Sbjct:    82 ICYEFVMSGWGTGY 95

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=IEA

GO:0034626 "fatty acid elongation, polyunsaturated fatty acid" evidence=IEA

GO:0019367 "fatty acid elongation, saturated fatty acid" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9GZR5 ELOVL4 "Elongation of very long chain fatty acids protein 4" [Homo sapiens (taxid:9606)]

 Score = 152 (58.6 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 28/74 (37%), Positives = 47/74 (63%)

Query:    59 LEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFN 118
             + D+ V+NW LMQ  WP ++I  LYL FV  +GP +M++R+P  ++ +++ YN    L N
Sbjct:    32 IADKRVENWPLMQSPWPTLSISTLYLLFVW-LGPKWMKDREPFQMRLVLIIYNFGMVLLN 90

Query:   119 AYIVSYIFSPGSFS 132
              +I   +F  GS++
Sbjct:    91 LFIFRELFM-GSYN 103

GO:0016740 "transferase activity" evidence=IEA

GO:0008020 "G-protein coupled photoreceptor activity" evidence=NAS

GO:0006633 "fatty acid biosynthetic process" evidence=NAS

GO:0019367 "fatty acid elongation, saturated fatty acid" evidence=IDA

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=ISS;IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IDA

GO:0019432 "triglyceride biosynthetic process" evidence=TAS

GO:0035338 "long-chain fatty-acyl-CoA biosynthetic process" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0009584 "detection of visible light" evidence=NAS

RGD|1310560 Elovl7 "ELOVL fatty acid elongase 7" [Rattus norvegicus (taxid:10116)]

 Score = 150 (57.9 bits), Expect = 2.2e-10, P = 2.2e-10
 Identities = 31/74 (41%), Positives = 40/74 (54%)

Query:    61 DETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAY 120
             D  V+NW LM    P   IL LY+ FV  +GP  M+NRKP  LK  M+ YN F  LF+ Y
Sbjct:    22 DPRVENWLLMSSPLPQTIILGLYVYFVTSLGPKLMENRKPFELKKAMITYNFFIVLFSVY 81

Query:   121 IV-SYIFSPGSFSY 133
             +   ++ S     Y
Sbjct:    82 MCYEFVMSGWGTGY 95

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0019367 "fatty acid elongation, saturated fatty acid" evidence=IEA;ISO

GO:0034626 "fatty acid elongation, polyunsaturated fatty acid" evidence=IEA;ISO

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=IEA;ISO

UNIPROTKB|Q3S8M4 ELOVL4 "Elongation of very long chain fatty acids protein 4" [Macaca mulatta (taxid:9544)]

 Score = 151 (58.2 bits), Expect = 2.4e-10, P = 2.4e-10
 Identities = 28/74 (37%), Positives = 47/74 (63%)

Query:    59 LEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFN 118
             + D+ V+NW LMQ  WP ++I  LYL FV  +GP +M++R+P  ++ +++ YN    L N
Sbjct:    32 IADKRVENWPLMQSPWPTLSISTLYLLFVW-LGPKWMKDREPFQMRLVLIIYNFGMVLLN 90

Query:   119 AYIVSYIFSPGSFS 132
              +I   +F  GS++
Sbjct:    91 FFIFRELFM-GSYN 103

GO:0005783 "endoplasmic reticulum" evidence=ISS

GO:0019367 "fatty acid elongation, saturated fatty acid" evidence=ISS

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=ISS

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=ISS

UNIPROTKB|Q95K73 ELOVL4 "Elongation of very long chain fatty acids protein 4" [Macaca fascicularis (taxid:9541)]

 Score = 151 (58.2 bits), Expect = 2.4e-10, P = 2.4e-10
 Identities = 28/74 (37%), Positives = 47/74 (63%)

Query:    59 LEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFN 118
             + D+ V+NW LMQ  WP ++I  LYL FV  +GP +M++R+P  ++ +++ YN    L N
Sbjct:    32 IADKRVENWPLMQSPWPTLSISTLYLLFVW-LGPKWMKDREPFQMRLVLIIYNFGMVLLN 90

Query:   119 AYIVSYIFSPGSFS 132
              +I   +F  GS++
Sbjct:    91 FFIFRELFM-GSYN 103

GO:0005783 "endoplasmic reticulum" evidence=ISS

GO:0019367 "fatty acid elongation, saturated fatty acid" evidence=ISS

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=ISS

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=ISS

UNIPROTKB|Q2KJD9 ELOVL5 "Elongation of very long chain fatty acids protein 5" [Bos taurus (taxid:9913)]

 Score = 121 (47.7 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
 Identities = 24/61 (39%), Positives = 36/61 (59%)

Query:    61 DETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAY 120
             D  V+ WFL+    P +   +LYL  V  +GP YM+ R+P S + I++ YNL  TL + Y
Sbjct:    20 DTRVEGWFLLDNYVPTLVCSILYLLIVW-LGPKYMKTRQPFSCRGILVVYNLGLTLLSLY 78

Query:   121 I 121
             +
Sbjct:    79 M 79

GO:0034625 "fatty acid elongation, monounsaturated fatty acid" evidence=ISS

GO:0034626 "fatty acid elongation, polyunsaturated fatty acid" evidence=ISS

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=ISS

GO:0009922 "fatty acid elongase activity" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1305630 Elovl4 "ELOVL fatty acid elongase 4" [Rattus norvegicus (taxid:10116)]

 Score = 147 (56.8 bits), Expect = 6.7e-10, P = 6.7e-10
 Identities = 27/74 (36%), Positives = 47/74 (63%)

Query:    59 LEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFN 118
             + D+ V++W LMQ  WP ++I  LYL FV  +GP +M++R+P  ++ +++ YN    L N
Sbjct:    32 IADKRVEDWPLMQSPWPTLSISTLYLLFVW-LGPKWMKDREPFQMRLVLIIYNFGMVLLN 90

Query:   119 AYIVSYIFSPGSFS 132
              +I   +F  GS++
Sbjct:    91 LFIFRELFM-GSYN 103

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0008150 "biological_process" evidence=ND

GO:0019367 "fatty acid elongation, saturated fatty acid" evidence=IEA;ISO

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IEA;ISO

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	163
pfam01151	244	pfam01151, ELO, GNS1/SUR4 family	5e-13

>gnl|CDD|216332 pfam01151, ELO, GNS1/SUR4 family

 Score = 63.8 bits (156), Expect = 5e-13
 Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)

Query: 68  FLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAYIVSYIF 126
            L+   WPVI I+VLYL FV  +GP  M+NRKP  LK +++ +NLF  L + Y    + 
Sbjct: 1   PLLSSPWPVILIIVLYLVFV-FLGPKIMRNRKPFDLKRLLIVHNLFLVLLSLYGFYGLL 58

Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 affects plasma membrane H+-ATPase activity, and may act on a glucose-signaling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1. Length = 244

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	163
PTZ00251	272	fatty acid elongase; Provisional	99.73
KOG3071|consensus	274		99.71
PF01151	250	ELO: GNS1/SUR4 family; InterPro: IPR002076 This gr	99.62
KOG3072|consensus	282		98.93
PF06423	136	GWT1: GWT1; InterPro: IPR009447 Glycosylphosphatid	90.12

>PTZ00251 fatty acid elongase; Provisional

Probab=99.73  E-value=1.5e-17  Score=142.47  Aligned_cols=96  Identities=18%  Similarity=0.210  Sum_probs=80.9

Q ss_pred             CCccccccccccCchhHHHHHHHHHHHHHHhhHHhhcc----CCCcc-chHHHHHHHHHHHHHHHHHHHHHHH----hhh
Q psy11842         60 EDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQN----RKPMS-LKYIMLAYNLFQTLFNAYIVSYIFS----PGS  130 (163)
Q Consensus        60 ~D~rt~~WpLm~sp~~~i~I~i~YL~~V~~~Gpk~Mkn----RkPf~-Lk~lL~lyNl~qvv~S~ym~~e~l~----~~~  130 (163)
                      ..+|+++| +++||++++.++++|+++|+ .||++||+    |||++ ||+++.+||++|+++|++++++...    ..+
T Consensus        13 ~~~~~~~w-l~~~~~~~~~i~~~Yl~~V~-~Gp~~M~~~~~~Rkp~~~Lr~~l~~yNl~l~v~s~~~~~~~~~~~~~~~~   90 (272)
T PTZ00251         13 DGHAVQKW-LASNVDICVYIAAAYLTFVF-KGPQLVDAIFHGNPPVPLIKKCWALWNIGLSVFSMYGVYRVVPPLLNNLR   90 (272)
T ss_pred             CcHHHHHH-HHhCCHHHHHHHHHHHHHHH-HHHHHHhhccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35889999 89999999999999999999 99999975    99999 9999999999999999999998863    333


Q ss_pred             c-CC--------CCh-hhHHHHHHHHHHHHHhhhHHh
Q psy11842        131 F-SY--------LKP-MSLKYIMLAYNLFQTLFNAYI  157 (163)
Q Consensus       131 ~-~~--------~~P-~s~~~~~~~w~~f~~~~~~~~  157 (163)
                      . +.        .+| .+.+++..+|+||+||+-..+
T Consensus        91 ~~g~~~~~C~~~~~~~~~~~~~~~~~~f~lsK~~El~  127 (272)
T PTZ00251         91 KYGLHDTLCTFREDEFYTGKVGVAMGLFSISKVPEFG  127 (272)
T ss_pred             hcCcceeeecCCCCcchhHHHHHHHHHHHHHHHHHHH
Confidence            2 21        123 247889999999999986543

>KOG3071|consensus

Probab=99.71  E-value=3.1e-17  Score=141.28  Aligned_cols=97  Identities=32%  Similarity=0.449  Sum_probs=86.1

Q ss_pred             cCCccccccccccCchhHHHHHHHHHHHHHHhhHHhhccCCCccchHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-----
Q psy11842         59 LEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAYIVSYIFSPGSFSY-----  133 (163)
Q Consensus        59 ~~D~rt~~WpLm~sp~~~i~I~i~YL~~V~~~Gpk~MknRkPf~Lk~lL~lyNl~qvv~S~ym~~e~l~~~~~~~-----  133 (163)
                      ..|++++ ||++++|+++..++.+|+ +|.+.||++|+||||++||+++.+||+.|+++|+.++.+.....|...     
T Consensus        17 ~~~~~v~-~~~l~s~~~~~~il~~yl-~v~~~G~~~m~nrkp~~l~~~~~vyN~~~vl~s~~i~~~~~~~~~~~~~y~l~   94 (274)
T KOG3071|consen   17 SPDDRVR-SPLLSSPWPLLSILLAYL-FVLKLGPKLMRNRKPLKLRGLSQVYNLGQVLLSAAIFLEGELWRWLKTAYNLR   94 (274)
T ss_pred             CCCcccc-chhccCcHHHHHHHHHHH-HHHHhcHhhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccceE
Confidence            5567666 899999999999999999 666799999999999999999999999999999998888888777642     


Q ss_pred             -------CChhhHHHHHHHHHHHHHhhhHHh
Q psy11842        134 -------LKPMSLKYIMLAYNLFQTLFNAYI  157 (163)
Q Consensus       134 -------~~P~s~~~~~~~w~~f~~~~~~~~  157 (163)
                             .+|...|+...||+||+|||-..+
T Consensus        95 c~~~~~~~~~~~~r~~~~~~~yylsKflel~  125 (274)
T KOG3071|consen   95 CQPCFPSDHEPKLRERFWSYLYYLSKFLELL  125 (274)
T ss_pred             EEecCCCCCCcceeehHHHHHHHHHHHHHHH
Confidence                   358899999999999999997654

>PF01151 ELO: GNS1/SUR4 family; InterPro: IPR002076 This group of eukaryotic integral membrane proteins are evolutionary related, but exact function has not yet clearly been established

Probab=99.62  E-value=2.1e-15  Score=126.27  Aligned_cols=89  Identities=35%  Similarity=0.651  Sum_probs=74.0

Q ss_pred             ccccCchhHHHHHHHHHHHHHHhhHHhhccCCCccchHHHHHHHHHHHHHHHHHHHHHHHh--hh------cCCCC----
Q psy11842         68 FLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAYIVSYIFSP--GS------FSYLK----  135 (163)
Q Consensus        68 pLm~sp~~~i~I~i~YL~~V~~~Gpk~MknRkPf~Lk~lL~lyNl~qvv~S~ym~~e~l~~--~~------~~~~~----  135 (163)
                      .|++||++++.++++|+++|+ .||++||+|||++||+++.+||++|+++|++++++++..  .+      .+..|    
T Consensus         1 Wl~~~~~~~~~~~~~Yl~~V~-~g~~~m~~Rkp~~Lk~~~~~~N~~l~~~S~~~~~~~~~~~~~~~~~~g~~~~~C~~~~   79 (250)
T PF01151_consen    1 WLMSNPWFPILIVVLYLLFVF-LGPRFMKNRKPFNLKTLIIVYNLFLVVFSAYMFYGILPALFSSLFKGGLYSSFCQPVD   79 (250)
T ss_pred             CcccCCHHHHHHHHHHHHHHH-HHHHHHhhCCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccC
Confidence            157899999999999999997 999999999999999999999999999999999999843  21      11122    


Q ss_pred             -----hhhHHHHHHHHHHHHHhhhHHh
Q psy11842        136 -----PMSLKYIMLAYNLFQTLFNAYI  157 (163)
Q Consensus       136 -----P~s~~~~~~~w~~f~~~~~~~~  157 (163)
                           +...+.+-.+|+||.||+-..+
T Consensus        80 ~~~~~~~~~~~~~~~~~fylSK~~Ell  106 (250)
T PF01151_consen   80 FDPDSYSSGRVGFWYWLFYLSKYYELL  106 (250)
T ss_pred             CCCcccccchHHHHHHHHHHHHHHHHH
Confidence                 3355777788889999987654

The proteins have from 290 to 435 amino acid residues. Structurally, they seem to be formed of three sections: a N-terminal region with two transmembrane domains, a central hydrophilic loop and a C-terminal region that contains from one to three transmembrane domains. Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis []. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 (P40319 from SWISSPROT) affects plasma membrane H+-ATPase activity, and may act on a glucose-signalling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1 []. ; GO: 0016021 integral to membrane

>KOG3072|consensus

Probab=98.93  E-value=1.1e-09  Score=95.02  Aligned_cols=61  Identities=25%  Similarity=0.347  Sum_probs=51.6

Q ss_pred             ccccccccccCchhHHHHHHHHHHHHHHhhHHhhccCCCccchHHHHHHHHHHHHHHHHHHHH
Q psy11842         62 ETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAYIVSY  124 (163)
Q Consensus        62 ~rt~~WpLm~sp~~~i~I~i~YL~~V~~~Gpk~MknRkPf~Lk~lL~lyNl~qvv~S~ym~~e  124 (163)
                      .++..| +.+++...+.++++|++.|+ .|+++|+|||||+|+++|.+||.+++++|+.-+..
T Consensus        29 ~~~~~~-~~~~~~~si~is~~Y~v~if-~~q~fM~~RkpF~L~~pL~lWn~~La~FSi~g~lr   89 (282)
T KOG3072|consen   29 ESVVKF-FQEHWPLSIHISIAYLVLIF-GGQNFMKNRKPFQLTKPLNLWNFCLAAFSILGALR   89 (282)
T ss_pred             HHHHHH-HHhccchhHHHHHHHHHHHH-HHHHHHhcCCCCCCcChHHHHHHHHHHHHHHHHHH
Confidence            445555 34555567999999999999 99999999999999999999999999999984443

>PF06423 GWT1: GWT1; InterPro: IPR009447 Glycosylphosphatidylinositol (GPI) is a conserved post-translational modification to anchor cell surface proteins to plasma membrane in eukaryotes

Probab=90.12  E-value=3.8  Score=31.79  Aligned_cols=82  Identities=20%  Similarity=0.229  Sum_probs=50.1

Q ss_pred             hHHHHHHHHHHHHHHhhHHhhccCCCccchHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHhhh
Q psy11842         75 PVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAYIVSYIFSPGSFSYLKPMSLKYIMLAYNLFQTLFN  154 (163)
Q Consensus        75 ~~i~I~i~YL~~V~~~Gpk~MknRkPf~Lk~lL~lyNl~qvv~S~ym~~e~l~~~~~~~~~P~s~~~~~~~w~~f~~~~~  154 (163)
                      ..+.-+++|++-+- .|..+.++++...-+..-........++....+...+.........|.|+|++++.|...-.-+|
T Consensus         8 S~~GY~aIyl~g~~-~G~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~vSRRlaNl~Yvlwv~a~n   86 (136)
T PF06423_consen    8 SLPGYLAIYLIGVS-LGRYILPPSSSSNSSSRRQWIKLLIKLLILSFIFWALYYLLNSYIEPVSRRLANLPYVLWVLAFN   86 (136)
T ss_pred             hHHHHHHHHHHHHH-HhhhhhCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhHHhcchHHHHHHHHHH
Confidence            34556688888887 89999999887721111111112222222222222333333377889999999999998887777


Q ss_pred             HHh
Q psy11842        155 AYI  157 (163)
Q Consensus       155 ~~~  157 (163)
                      ...
T Consensus        87 ~~~   89 (136)
T PF06423_consen   87 TFF   89 (136)
T ss_pred             HHH
Confidence            654

GWT1 is involved in GPI anchor biosynthesis; it is required for inositol acylation in yeast [].; GO: 0016746 transferase activity, transferring acyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00