Psyllid ID: psy11849

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90----
Protein Sequence
MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFFHSAQVLIFDCGYPKLVAALLLLHSTIFFCLFSWH
Secondary Structure (PSIPRED)
ccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHEEEEEccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLifdcgypkllQFTLVFFHSAQVLIFDCGYPKLVAALLLLHSTIFFCLFSWH
Flexible Loop (DISEMBL)
MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFFHSAQVLIFDCGYPKLVAALLLLHSTIFFCLFSWH
Low Complexity Region (SEG)
MYFYYMVSAMGPEYQKYLWWKRHlttlqllqftlvffHSAQVLIFDCGYPKLLQFTLVFFHSAQVLIFDCGYPKLVAALLLLHSTIFFCLFSWH
Disordered region (IsUnstruct)
*YFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFFHSAQVLIFDCGYPKLVAALLLLHSTIFFCLFSW*
Disordered Region (DISOPRED)
MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFFHSAQVLIFDCGYPKLVAALLLLHSTIFFCLFSWH
Disordered Region (DISEMBL)
MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFFHSAQVLIFDCGYPKLVAALLLLHSTIFFCLFSWH
Disordered Region (DISPRO)
MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFFHSAQVLIFDCGYPKLVAALLLLHSTIFFCLFSWH
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFFHSAQVLIFDCGYPKLVAALLLLHSTIFFCLFSWH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	94	2.2.26 [Sep-21-2011]
Q1HRV8	358	Elongation of very long c	N/A	N/A	0.542	0.142	0.568	1e-12
D4ADY9	281	Elongation of very long c	yes	N/A	0.521	0.174	0.64	2e-11
Q9D2Y9	281	Elongation of very long c	yes	N/A	0.521	0.174	0.62	9e-11
Q9GZR5	314	Elongation of very long c	yes	N/A	0.723	0.216	0.455	3e-10
Q9EQC4	312	Elongation of very long c	no	N/A	0.723	0.217	0.455	3e-10
Q3S8M4	314	Elongation of very long c	yes	N/A	0.723	0.216	0.455	3e-10
Q95K73	314	Elongation of very long c	N/A	N/A	0.723	0.216	0.455	3e-10
A1L3X0	281	Elongation of very long c	no	N/A	0.521	0.174	0.58	2e-09
A0JNC4	281	Elongation of very long c	no	N/A	0.521	0.174	0.56	3e-09
Q9JLJ5	279	Elongation of very long c	no	N/A	0.744	0.250	0.387	2e-08

>sp|Q1HRV8|ELVL1_AEDAE Elongation of very long chain fatty acids protein AAEL008004 OS=Aedes aegypti GN=AAEL008004 PE=2 SV=2

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 41/51 (80%)

Query: 1   MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPK 51
           MY YY+ +AMGP++QKYLWWK++LT+LQ++QF  +  H+ Q+L  DC YPK
Sbjct: 183 MYTYYLFTAMGPQFQKYLWWKKYLTSLQMVQFVAIMVHAFQLLFIDCNYPK 233

Could be implicated in synthesis of very long chain fatty acids.
Aedes aegypti (taxid: 7159)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: nEC: 8

>sp|D4ADY9|ELOV7_RAT Elongation of very long chain fatty acids protein 7 OS=Rattus norvegicus GN=Elovl7 PE=3 SV=1

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/50 (64%), Positives = 37/50 (74%), Gaps = 1/50 (2%)

Query: 1   MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIF-DCGY 49
           MYFYY + AMGP YQKYLWWK+HLT+LQL+QF LV  H  Q+    DC Y
Sbjct: 184 MYFYYGLCAMGPAYQKYLWWKKHLTSLQLVQFVLVTVHIGQIFFMEDCNY 233

Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q9D2Y9|ELOV7_MOUSE Elongation of very long chain fatty acids protein 7 OS=Mus musculus GN=Elovl7 PE=2 SV=1

 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 1/50 (2%)

Query: 1   MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIF-DCGY 49
           MY YY + AMGP YQKYLWWK+HLT+LQL+QF LV  H  Q+    DC Y
Sbjct: 184 MYSYYGLCAMGPAYQKYLWWKKHLTSLQLVQFVLVTIHIGQIFFMEDCNY 233

Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q9GZR5|ELOV4_HUMAN Elongation of very long chain fatty acids protein 4 OS=Homo sapiens GN=ELOVL4 PE=1 SV=1

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 45/68 (66%)

Query: 1   MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFF 60
           MY YY ++A GP  QKYLWWKR+LT LQL+QF +   H+A  L  DC +PK + + L+ +
Sbjct: 195 MYSYYGLTAFGPWIQKYLWWKRYLTMLQLIQFHVTIGHTALSLYTDCPFPKWMHWALIAY 254

Query: 61  HSAQVLIF 68
             + + +F
Sbjct: 255 AISFIFLF 262

Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs). Elongates C24:0 and C26:0 acyl-CoAs. Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum. May be implicated in docosahexaenoic acid (DHA) biosynthesis, which requires dietary consumption of the essential alpha-linolenic acid and a subsequent series of three elongation steps. May play a critical role in early brain and skin development.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q9EQC4|ELOV4_MOUSE Elongation of very long chain fatty acids protein 4 OS=Mus musculus GN=Elovl4 PE=1 SV=2

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 45/68 (66%)

Query: 1   MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFF 60
           MY YY ++A GP  QKYLWWKR+LT LQL+QF +   H+A  L  DC +PK + + L+ +
Sbjct: 195 MYSYYGLTAFGPWIQKYLWWKRYLTMLQLVQFHVTIGHTALSLYTDCPFPKWMHWALIAY 254

Query: 61  HSAQVLIF 68
             + + +F
Sbjct: 255 AISFIFLF 262

Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs) (By similarity). Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum. May play a critical role in early brain and skin development.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q3S8M4|ELOV4_MACMU Elongation of very long chain fatty acids protein 4 OS=Macaca mulatta GN=ELOVL4 PE=3 SV=1

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 45/68 (66%)

Query: 1   MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFF 60
           MY YY ++A GP  QKYLWWKR+LT LQL+QF +   H+A  L  DC +PK + + L+ +
Sbjct: 195 MYSYYGLAAFGPWIQKYLWWKRYLTMLQLVQFHVTIGHTALSLYTDCPFPKWMHWALIAY 254

Query: 61  HSAQVLIF 68
             + + +F
Sbjct: 255 AISFIFLF 262

Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs) (By similarity). Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum (By similarity). May play a critical role in early brain and skin development.

Macaca mulatta (taxid: 9544)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q95K73|ELOV4_MACFA Elongation of very long chain fatty acids protein 4 OS=Macaca fascicularis GN=ELOVL4 PE=2 SV=1

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 45/68 (66%)

Query: 1   MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFF 60
           MY YY ++A GP  QKYLWWKR+LT LQL+QF +   H+A  L  DC +PK + + L+ +
Sbjct: 195 MYSYYGLAAFGPWIQKYLWWKRYLTMLQLVQFHVTIGHTALSLYTDCPFPKWMHWALIAY 254

Query: 61  HSAQVLIF 68
             + + +F
Sbjct: 255 AISFIFLF 262

Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs) (By similarity). Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum (By similarity). May play a critical role in early brain and skin development.

Macaca fascicularis (taxid: 9541)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|A1L3X0|ELOV7_HUMAN Elongation of very long chain fatty acids protein 7 OS=Homo sapiens GN=ELOVL7 PE=1 SV=1

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 1/50 (2%)

Query: 1   MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQ-VLIFDCGY 49
           MY YY +SA+GP YQKYLWWK++LT+LQL+QF +V  H +Q   + DC Y
Sbjct: 184 MYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKY 233

Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs, especially C18:3(n-3) acyl-CoAs and C18:3(n-6)-CoAs. Also active toward C20:4-, C18:0-, C18:1-, C18:2-and C16:0-CoAs, and weakly toward C20:0-CoA. Little or no activity toward C22:0-, C24:0-, or C26:0-CoAs.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|A0JNC4|ELOV7_BOVIN Elongation of very long chain fatty acids protein 7 OS=Bos taurus GN=ELOVL7 PE=2 SV=1

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)

Query: 1   MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIF-DCGY 49
           MY YY + A+GP+YQKYLWWK++LT+LQL+QF L+  H +Q     DC Y
Sbjct: 184 MYSYYGLCALGPDYQKYLWWKKYLTSLQLIQFVLITIHISQFFFMEDCKY 233

Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q9JLJ5|ELOV1_MOUSE Elongation of very long chain fatty acids protein 1 OS=Mus musculus GN=Elovl1 PE=2 SV=1

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 23/93 (24%)

Query: 1   MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQ-VLIFDCGYPKLLQFTLVF 59
           MY YY +SA+GP  Q YLWWK+H+T +QL+QF LV  H +Q   +  C Y          
Sbjct: 178 MYLYYGLSALGPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMPSCNY---------- 227

Query: 60  FHSAQVLIFDCGYPKLVAALLLLHSTIFFCLFS 92
                       YP ++  L+ ++ TIFF LFS
Sbjct: 228 -----------QYP-IIIHLIWMYGTIFFILFS 248

Involved in the biosynthesis of C26 fatty acids and sphingolipids. Condensing enzyme that catalyzes the synthesis of both saturated and monounsaturated very long chain fatty acids. Exhibits activity toward saturated C18 to C26 acyl-CoA substrates, with the highest activity towards C22:0 acyl-CoA. Important for saturated C24:0 and monounsaturated C24:1 sphingolipid synthesis. Important for sphingolipid biosynthesis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	94
242004853	221	hypothetical protein Phum_PHUM047430 [Pe	0.723	0.307	0.648	2e-24
383849794	304	PREDICTED: LOW QUALITY PROTEIN: elongati	0.734	0.226	0.673	4e-24
328712446	188	PREDICTED: elongation of very long chain	0.723	0.361	0.670	6e-24
380014340	299	PREDICTED: elongation of very long chain	0.734	0.230	0.663	7e-24
110764372	299	PREDICTED: elongation of very long chain	0.734	0.230	0.663	8e-24
340722439	299	PREDICTED: elongation of very long chain	0.734	0.230	0.641	5e-23
350416502	299	PREDICTED: elongation of very long chain	0.734	0.230	0.641	7e-23
307194401	377	Elongation of very long chain fatty acid	0.734	0.183	0.630	1e-22
156553612	305	PREDICTED: elongation of very long chain	0.723	0.222	0.626	3e-22
91093072	268	PREDICTED: similar to elongation of very	0.734	0.257	0.576	1e-20

>gi|242004853|ref|XP_002423291.1| hypothetical protein Phum_PHUM047430 [Pediculus humanus corporis] gi|212506293|gb|EEB10553.1| hypothetical protein Phum_PHUM047430 [Pediculus humanus corporis]

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/91 (64%), Positives = 65/91 (71%), Gaps = 23/91 (25%)

Query: 1   MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFF 60
           MYFYYM+SAMGPEYQKYLWWK+HLTT+QL QFTLVFFHSAQVL+FDC             
Sbjct: 137 MYFYYMMSAMGPEYQKYLWWKKHLTTIQLAQFTLVFFHSAQVLVFDC------------- 183

Query: 61  HSAQVLIFDCGYPKLVAALLLLHSTIFFCLF 91
                     GYPK +AALLL+HSTIFF LF
Sbjct: 184 ----------GYPKFIAALLLVHSTIFFALF 204

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383849794|ref|XP_003700521.1| PREDICTED: LOW QUALITY PROTEIN: elongation of very long chain fatty acids protein 7-like [Megachile rotundata]

 Score =  115 bits (287), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 62/92 (67%), Positives = 64/92 (69%), Gaps = 23/92 (25%)

Query: 1   MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFF 60
           MY YYMVSAMGPEYQKYLWWK+HLTT+QLLQF LVF HSAQ LIFDCG            
Sbjct: 212 MYLYYMVSAMGPEYQKYLWWKKHLTTVQLLQFFLVFVHSAQALIFDCG------------ 259

Query: 61  HSAQVLIFDCGYPKLVAALLLLHSTIFFCLFS 92
                      YPKLVAALLLLHSTIFF LFS
Sbjct: 260 -----------YPKLVAALLLLHSTIFFVLFS 280

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328712446|ref|XP_001950768.2| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like, partial [Acyrthosiphon pisum]

 Score =  114 bits (286), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 61/91 (67%), Positives = 66/91 (72%), Gaps = 23/91 (25%)

Query: 1   MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFF 60
           MYFYYM+SAMGP+YQKYLWWK+HLTT+QLLQFTLV                       FF
Sbjct: 102 MYFYYMMSAMGPQYQKYLWWKKHLTTIQLLQFTLV-----------------------FF 138

Query: 61  HSAQVLIFDCGYPKLVAALLLLHSTIFFCLF 91
           HSAQVL FDCGYPKLVAALLL+HSTIFF LF
Sbjct: 139 HSAQVLFFDCGYPKLVAALLLVHSTIFFVLF 169

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380014340|ref|XP_003691193.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Apis florea]

 Score =  114 bits (285), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 61/92 (66%), Positives = 64/92 (69%), Gaps = 23/92 (25%)

Query: 1   MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFF 60
           MY YYMVSAMGPEYQKYLWWK+HLTT+QL+QF LVF HSAQ LIFDCG            
Sbjct: 212 MYLYYMVSAMGPEYQKYLWWKKHLTTVQLVQFFLVFVHSAQALIFDCG------------ 259

Query: 61  HSAQVLIFDCGYPKLVAALLLLHSTIFFCLFS 92
                      YPKLVAALLLLHSTIFF LFS
Sbjct: 260 -----------YPKLVAALLLLHSTIFFVLFS 280

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|110764372|ref|XP_001120770.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Apis mellifera]

 Score =  114 bits (285), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 61/92 (66%), Positives = 64/92 (69%), Gaps = 23/92 (25%)

Query: 1   MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFF 60
           MY YYMVSAMGPEYQKYLWWK+HLTT+QL+QF LVF                        
Sbjct: 212 MYLYYMVSAMGPEYQKYLWWKKHLTTVQLVQFFLVFV----------------------- 248

Query: 61  HSAQVLIFDCGYPKLVAALLLLHSTIFFCLFS 92
           HSAQ LIFDCGYPKLVAALLLLHSTIFF LFS
Sbjct: 249 HSAQALIFDCGYPKLVAALLLLHSTIFFILFS 280

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340722439|ref|XP_003399613.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Bombus terrestris]

 Score =  111 bits (278), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 59/92 (64%), Positives = 63/92 (68%), Gaps = 23/92 (25%)

Query: 1   MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFF 60
           MY YYMVSAMGPEY KYLWWK+HLTT+QL+QF LVF HSAQ L+FDCG            
Sbjct: 212 MYMYYMVSAMGPEYHKYLWWKKHLTTVQLVQFFLVFVHSAQALVFDCG------------ 259

Query: 61  HSAQVLIFDCGYPKLVAALLLLHSTIFFCLFS 92
                      YPKLVAALLLLHSTIFF LFS
Sbjct: 260 -----------YPKLVAALLLLHSTIFFVLFS 280

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350416502|ref|XP_003490969.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Bombus impatiens]

 Score =  111 bits (277), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 59/92 (64%), Positives = 63/92 (68%), Gaps = 23/92 (25%)

Query: 1   MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFF 60
           MY YYMVSAMGPEY KYLWWK+HLTT+QL+QF LVF HSAQ L+FDCG            
Sbjct: 212 MYMYYMVSAMGPEYHKYLWWKKHLTTVQLVQFFLVFVHSAQALVFDCG------------ 259

Query: 61  HSAQVLIFDCGYPKLVAALLLLHSTIFFCLFS 92
                      YPKLVAALLLLHSTIFF LFS
Sbjct: 260 -----------YPKLVAALLLLHSTIFFVLFS 280

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307194401|gb|EFN76719.1| Elongation of very long chain fatty acids protein AAEL008004 [Harpegnathos saltator]

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/92 (63%), Positives = 62/92 (67%), Gaps = 23/92 (25%)

Query: 1   MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFF 60
           MY YYM++AMGPEYQKYLWWK+HLTTLQL+QF LVF                        
Sbjct: 289 MYAYYMLAAMGPEYQKYLWWKKHLTTLQLVQFFLVFV----------------------- 325

Query: 61  HSAQVLIFDCGYPKLVAALLLLHSTIFFCLFS 92
           HS Q LIFDCGYPKLVA LLLLHSTIFF LFS
Sbjct: 326 HSTQALIFDCGYPKLVAGLLLLHSTIFFVLFS 357

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156553612|ref|XP_001599942.1| PREDICTED: elongation of very long chain fatty acids protein 7-like [Nasonia vitripennis]

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 57/91 (62%), Positives = 63/91 (69%), Gaps = 23/91 (25%)

Query: 1   MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFF 60
           MYFYYM++A GPEYQKYLWWK+HLTT+QL+QF LVF HSAQ L+FDCG            
Sbjct: 216 MYFYYMLAAAGPEYQKYLWWKKHLTTVQLVQFFLVFVHSAQALVFDCG------------ 263

Query: 61  HSAQVLIFDCGYPKLVAALLLLHSTIFFCLF 91
                      YPKLVAALLLLHSTIFF LF
Sbjct: 264 -----------YPKLVAALLLLHSTIFFVLF 283

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91093072|ref|XP_968636.1| PREDICTED: similar to elongation of very long chain fatty acids protein 4 [Tribolium castaneum]

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/92 (57%), Positives = 61/92 (66%), Gaps = 23/92 (25%)

Query: 1   MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFF 60
           MYFYYMV+AMGPEYQKYLWWK+HLTT+QL+QF LVF                        
Sbjct: 183 MYFYYMVAAMGPEYQKYLWWKKHLTTIQLVQFGLVFI----------------------- 219

Query: 61  HSAQVLIFDCGYPKLVAALLLLHSTIFFCLFS 92
           HSAQ+L  DCGYP+ + ALLLLHS IFF LF+
Sbjct: 220 HSAQLLFTDCGYPRFIGALLLLHSAIFFALFT 251

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	94
FB|FBgn0051522	365	CG31522 [Drosophila melanogast	0.542	0.139	0.509	1.7e-10
FB|FBgn0051523	354	CG31523 [Drosophila melanogast	0.542	0.144	0.470	2e-10
FB|FBgn0038986	295	CG5278 [Drosophila melanogaste	0.829	0.264	0.402	7.3e-10
UNIPROTKB|Q1HRV8	358	AAEL008004 "Elongation of very	0.542	0.142	0.450	1.5e-09
FB|FBgn0260942	322	bond "james bond" [Drosophila	0.680	0.198	0.426	3.3e-09
UNIPROTKB|F1NXS3	280	ELOVL4 "Uncharacterized protei	0.723	0.242	0.338	4.8e-09
RGD|1310560	281	Elovl7 "ELOVL fatty acid elong	0.712	0.238	0.380	2.3e-08
UNIPROTKB|A5PKE6	314	ELOVL4 "ELOVL4 protein" [Bos t	0.723	0.216	0.352	3.1e-08
UNIPROTKB|I3LVJ0	304	LOC100623120 "Uncharacterized	0.723	0.223	0.352	3.7e-08
UNIPROTKB|F1RQL1	309	F1RQL1 "Uncharacterized protei	0.723	0.220	0.352	3.8e-08

FB|FBgn0051522 CG31522 [Drosophila melanogaster (taxid:7227)]

 Score = 154 (59.3 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 26/51 (50%), Positives = 31/51 (60%)

Query:     1 MYFYYMVSAMGPEYQKYLWWKRHXXXXXXXXXXXXXXHSAQVLIFDCGYPK 51
             MY YYM SAMGP+YQKYLWWK++              H+ Q+L  DC YPK
Sbjct:   183 MYTYYMFSAMGPQYQKYLWWKKYLTTLQMVQFILIMVHAFQLLFIDCNYPK 233

GO:0000038 "very long-chain fatty acid metabolic process" evidence=ISS

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0051523 CG31523 [Drosophila melanogaster (taxid:7227)]

 Score = 153 (58.9 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 24/51 (47%), Positives = 32/51 (62%)

Query:     1 MYFYYMVSAMGPEYQKYLWWKRHXXXXXXXXXXXXXXHSAQVLIFDCGYPK 51
             MYFYYM++AMGP+YQKY+WWK++              H  Q+L  +C YPK
Sbjct:   183 MYFYYMIAAMGPKYQKYIWWKKYLTTFQMVQFVAIFTHQFQLLFRECDYPK 233

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

GO:0000038 "very long-chain fatty acid metabolic process" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0038986 CG5278 [Drosophila melanogaster (taxid:7227)]

 Score = 146 (56.5 bits), Expect = 7.3e-10, P = 7.3e-10
 Identities = 33/82 (40%), Positives = 42/82 (51%)

Query:     1 MYFYYMVSAMGPEYQKYLWWKRHXXXXXXXXXXXXXXHSAQVLIFDCGYPKL-LQFTL-- 57
             MY YY +SA GP+ QKYLWWK++              H  Q+L  DCGYP+  + FTL  
Sbjct:   181 MYSYYFLSAFGPQMQKYLWWKKYITNLQMIQFCCAFIHQTQLLYTDCGYPRWSVCFTLPN 240

Query:    58 -VFFHSAQVLIFDCGYPKLVAA 78
              VFF+      +   Y K  AA
Sbjct:   241 AVFFYFLFNDFYQKSYKKKQAA 262

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q1HRV8 AAEL008004 "Elongation of very long chain fatty acids protein AAEL008004" [Aedes aegypti (taxid:7159)]

 Score = 145 (56.1 bits), Expect = 1.5e-09, P = 1.5e-09
 Identities = 23/51 (45%), Positives = 31/51 (60%)

Query:     1 MYFYYMVSAMGPEYQKYLWWKRHXXXXXXXXXXXXXXHSAQVLIFDCGYPK 51
             MY YY+ +AMGP++QKYLWWK++              H+ Q+L  DC YPK
Sbjct:   183 MYTYYLFTAMGPQFQKYLWWKKYLTSLQMVQFVAIMVHAFQLLFIDCNYPK 233

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=ISS

FB|FBgn0260942 bond "james bond" [Drosophila melanogaster (taxid:7227)]

 Score = 141 (54.7 bits), Expect = 3.3e-09, P = 3.3e-09
 Identities = 29/68 (42%), Positives = 35/68 (51%)

Query:     1 MYFYYMVSAMGPEYQKYLWWKRHXXXXXXXXXXXXXXHSAQVLIFDCGYPKLLQFTLVFF 60
             MYFYYMV+AMGP+YQKYLWWK++              +   V    C  PK    TL FF
Sbjct:   182 MYFYYMVAAMGPQYQKYLWWKKYMTSIQLIQFVLILGYMLTVGAKGCNMPK----TLTFF 237

Query:    61 HSAQVLIF 68
                  +IF
Sbjct:   238 FVGNTVIF 245

GO:0016021 "integral to membrane" evidence=IEA

GO:0000915 "cytokinesis, actomyosin contractile ring assembly" evidence=IMP

GO:0051225 "spindle assembly" evidence=IMP

GO:0007111 "cytokinesis after meiosis II" evidence=IMP

GO:0007110 "cytokinesis after meiosis I" evidence=IMP

GO:0007112 "male meiosis cytokinesis" evidence=IMP

GO:0000212 "meiotic spindle organization" evidence=IMP

UNIPROTKB|F1NXS3 ELOVL4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 138 (53.6 bits), Expect = 4.8e-09, P = 4.8e-09
 Identities = 23/68 (33%), Positives = 37/68 (54%)

Query:     1 MYFYYMVSAMGPEYQKYLWWKRHXXXXXXXXXXXXXXHSAQVLIFDCGYPKLLQFTLVFF 60
             MY YY ++A GP+ QKYLWWKR+              H+A  +  DC +PK + + ++F+
Sbjct:   161 MYMYYGLAACGPKVQKYLWWKRYLTILQLVQFHVTIGHTALSIYIDCPFPKWMHWGVIFY 220

Query:    61 HSAQVLIF 68
                 + +F
Sbjct:   221 AITFIFLF 228

GO:0019367 "fatty acid elongation, saturated fatty acid" evidence=IEA

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IEA

RGD|1310560 Elovl7 "ELOVL fatty acid elongase 7" [Rattus norvegicus (taxid:10116)]

 Score = 132 (51.5 bits), Expect = 2.3e-08, P = 2.3e-08
 Identities = 27/71 (38%), Positives = 36/71 (50%)

Query:     1 MYFYYMVSAMGPEYQKYLWWKRHXXXXXXXXXXXXXXHSAQVLIF-DCGY--PKLLQFTL 57
             MYFYY + AMGP YQKYLWWK+H              H  Q+    DC Y  P  L + +
Sbjct:   184 MYFYYGLCAMGPAYQKYLWWKKHLTSLQLVQFVLVTVHIGQIFFMEDCNYQYPVFL-YII 242

Query:    58 VFFHSAQVLIF 68
             + +    +L+F
Sbjct:   243 MSYGCIFLLLF 253

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0019367 "fatty acid elongation, saturated fatty acid" evidence=IEA;ISO

GO:0034626 "fatty acid elongation, polyunsaturated fatty acid" evidence=IEA;ISO

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=IEA;ISO

UNIPROTKB|A5PKE6 ELOVL4 "ELOVL4 protein" [Bos taurus (taxid:9913)]

 Score = 132 (51.5 bits), Expect = 3.1e-08, P = 3.1e-08
 Identities = 24/68 (35%), Positives = 36/68 (52%)

Query:     1 MYFYYMVSAMGPEYQKYLWWKRHXXXXXXXXXXXXXXHSAQVLIFDCGYPKLLQFTLVFF 60
             MY YY ++A GP  QKYLWWKR+              H+A  L  DC +PK + + L+ +
Sbjct:   195 MYSYYGLAAFGPWIQKYLWWKRYLTMLQLVQFHVTIGHTALSLYTDCPFPKWMHWALIVY 254

Query:    61 HSAQVLIF 68
               + + +F
Sbjct:   255 AVSFIFLF 262

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IEA

GO:0019367 "fatty acid elongation, saturated fatty acid" evidence=IEA

UNIPROTKB|I3LVJ0 LOC100623120 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 131 (51.2 bits), Expect = 3.7e-08, P = 3.7e-08
 Identities = 24/68 (35%), Positives = 36/68 (52%)

Query:     1 MYFYYMVSAMGPEYQKYLWWKRHXXXXXXXXXXXXXXHSAQVLIFDCGYPKLLQFTLVFF 60
             MY YY ++A GP  QKYLWWKR+              H+A  L  DC +PK + + L+ +
Sbjct:   185 MYSYYGLTAFGPWIQKYLWWKRYLTMLQLVQFHVTIGHTALSLYTDCPFPKWMHWALIAY 244

Query:    61 HSAQVLIF 68
               + + +F
Sbjct:   245 AISFIFLF 252

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1RQL1 F1RQL1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 131 (51.2 bits), Expect = 3.8e-08, P = 3.8e-08
 Identities = 24/68 (35%), Positives = 36/68 (52%)

Query:     1 MYFYYMVSAMGPEYQKYLWWKRHXXXXXXXXXXXXXXHSAQVLIFDCGYPKLLQFTLVFF 60
             MY YY ++A GP  QKYLWWKR+              H+A  L  DC +PK + + L+ +
Sbjct:   195 MYSYYGLTAFGPWIQKYLWWKRYLTMLQLVQFHVTIGHTALSLYTDCPFPKWMHWALIAY 254

Query:    61 HSAQVLIF 68
               + + +F
Sbjct:   255 AISFIFLF 262

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
D4ADY9	ELOV7_RAT	2, ., 3, ., 1, ., n, 8	0.64	0.5212	0.1743	yes	N/A
Q9D2Y9	ELOV7_MOUSE	2, ., 3, ., 1, ., n, 8	0.62	0.5212	0.1743	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	94
pfam01151	244	pfam01151, ELO, GNS1/SUR4 family	6e-09

>gnl|CDD|216332 pfam01151, ELO, GNS1/SUR4 family

 Score = 50.3 bits (121), Expect = 6e-09
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 1   MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFF 60
           MYFYY ++A+G      +WWK+++T LQ++QF L   H    L           F     
Sbjct: 157 MYFYYFLAALGAR-GLPVWWKKYITQLQIIQFVLGLAHVGYALYNYTKGGCGGPFPKAVR 215

Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 affects plasma membrane H+-ATPase activity, and may act on a glucose-signaling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1. Length = 244

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	94
KOG3071|consensus	274		99.76
PF01151	250	ELO: GNS1/SUR4 family; InterPro: IPR002076 This gr	99.58
PTZ00251	272	fatty acid elongase; Provisional	99.58
KOG3072|consensus	282		98.47

>KOG3071|consensus

Probab=99.76  E-value=9.9e-19  Score=136.31  Aligned_cols=69  Identities=42%  Similarity=0.710  Sum_probs=63.3

Q ss_pred             CchhhHHHhhCCCccchhhhhhhhhhhhhHHHHHHHHHHhhhhhhcCCCchHHHHHHHHHHHhhh-hc-cCCCCcHH-HH
Q psy11849          1 MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFFHSAQV-LI-FDCGYPKL-VA   77 (94)
Q Consensus         1 MY~YY~~sa~g~~~~~~lw~Kk~iT~lQivQF~i~~~h~~~~~~~~c~~~~~~qf~~i~~h~~~~-l~-~~C~~p~~-~~   77 (94)
                      ||+||++||+||++|+++||||++|.+|++||+++.+|.                       .+. ++ +||++|++ ++
T Consensus       180 MY~YYflsa~G~~v~~~lWWkky~t~vQlvqf~~~~~~~-----------------------~~~~~~~~~c~~~~~~~~  236 (274)
T KOG3071|consen  180 MYGYYFLSAFGPRVQWYLWWKKYITIVQLVQFLILFVHT-----------------------LYVHLFKPGCCFGIGAWA  236 (274)
T ss_pred             HHHHHHHHhhCcCccccchHHHHHHHHHHHHHHHHHHHH-----------------------hheeeecCCCCCchHHHH
Confidence            899999999999999999999999999999999999998                       344 44 59999999 88


Q ss_pred             HHHHHHHHHHHHhcc
Q psy11849         78 ALLLLHSTIFFCLFS   92 (94)
Q Consensus        78 ~~~~~~~~~~l~LF~   92 (94)
                      ..+..++++|+.||+
T Consensus       237 ~~~~~~~~~~l~LF~  251 (274)
T KOG3071|consen  237 FNGSVINVSFLLLFS  251 (274)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            888999999999996

>PF01151 ELO: GNS1/SUR4 family; InterPro: IPR002076 This group of eukaryotic integral membrane proteins are evolutionary related, but exact function has not yet clearly been established

Probab=99.58  E-value=1.8e-15  Score=114.40  Aligned_cols=72  Identities=39%  Similarity=0.729  Sum_probs=59.6

Q ss_pred             CchhhHHHhhCCCccchhhhhhhhhhhhhHHHHHHHHHHhhhhhhcCCCchHHHHHHHHHHHhhhhc--cCC---CCcHH
Q psy11849          1 MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFFHSAQVLI--FDC---GYPKL   75 (94)
Q Consensus         1 MY~YY~~sa~g~~~~~~lw~Kk~iT~lQivQF~i~~~h~~~~~~~~c~~~~~~qf~~i~~h~~~~l~--~~C---~~p~~   75 (94)
                      ||+||+++|+|.| +...||||+||.+||+||++++++..++.+                   ....  .||   ++|+.
T Consensus       159 MY~YY~l~a~g~~-~~~~~~k~~IT~~Qi~QF~~~~~~~~~~~~-------------------~~~~~~~~C~~~~~~~~  218 (250)
T PF01151_consen  159 MYSYYFLSALGIR-KVPRWWKKYITSLQIVQFVIGIVHTVYALY-------------------YYFFPGGDCDTSGYPKF  218 (250)
T ss_pred             HHHHHHHHhcccc-cchhHHHHHHhHHhhhhhHHHHHHHHHHhh-------------------eeccCCCCCCcchhHHH
Confidence            8999999999954 122699999999999999999999865531                   1111  489   88999


Q ss_pred             HHHHHHHHHHHHHHhcc
Q psy11849         76 VAALLLLHSTIFFCLFS   92 (94)
Q Consensus        76 ~~~~~~~~~~~~l~LF~   92 (94)
                      ...+...+.+++++||+
T Consensus       219 ~~~~~~~~~~s~l~LF~  235 (250)
T PF01151_consen  219 NAILGLVYYVSYLYLFI  235 (250)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999999996

The proteins have from 290 to 435 amino acid residues. Structurally, they seem to be formed of three sections: a N-terminal region with two transmembrane domains, a central hydrophilic loop and a C-terminal region that contains from one to three transmembrane domains. Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis []. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 (P40319 from SWISSPROT) affects plasma membrane H+-ATPase activity, and may act on a glucose-signalling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1 []. ; GO: 0016021 integral to membrane

>PTZ00251 fatty acid elongase; Provisional

Probab=99.58  E-value=3.6e-15  Score=115.57  Aligned_cols=74  Identities=28%  Similarity=0.318  Sum_probs=59.7

Q ss_pred             CchhhHHHhhCCCccchhhhhhhhhhhhhHHHHHHHHHHhhhhhh--cCCCchHHHHHHHHHHHhhhhccCCCCcH-HHH
Q psy11849          1 MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIF--DCGYPKLLQFTLVFFHSAQVLIFDCGYPK-LVA   77 (94)
Q Consensus         1 MY~YY~~sa~g~~~~~~lw~Kk~iT~lQivQF~i~~~h~~~~~~~--~c~~~~~~qf~~i~~h~~~~l~~~C~~p~-~~~   77 (94)
                      ||+||++||+||+ +...||||+||.+||+||+++++|..+++..  ||.+                 -.+|++|+ ...
T Consensus       179 MY~YY~lsa~g~~-~~~~~~kk~IT~lQi~Qfv~~~~~~~~~~~~~~~~~~-----------------~~~C~~~~~~~~  240 (272)
T PTZ00251        179 MYFYFALSEAGFK-KLVKPFAMYITLLQITQMVGGLFVSGYVIVQKLTKGD-----------------PKGCSGTTMATA  240 (272)
T ss_pred             HHHHHHHHhcCCc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-----------------CCCCCCchHHHH
Confidence            8999999999997 2223699999999999999999998766431  2332                 13799998 777


Q ss_pred             HHHHHHHHHHHHhcc
Q psy11849         78 ALLLLHSTIFFCLFS   92 (94)
Q Consensus        78 ~~~~~~~~~~l~LF~   92 (94)
                      .....+++++++||+
T Consensus       241 ~~~~~~~~s~l~LF~  255 (272)
T PTZ00251        241 RGQLMIYIFNFYLFS  255 (272)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            788889999999996

>KOG3072|consensus

Probab=98.47  E-value=9.9e-08  Score=75.25  Aligned_cols=70  Identities=27%  Similarity=0.391  Sum_probs=54.5

Q ss_pred             CchhhHHHhhCCCccchhhhhhhhhhhhhHHHHHHHHHHhhhhhhcCCCchHHHHHHHHHHHhhhh-cc--CCCCcHHHH
Q psy11849          1 MYFYYMVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCGYPKLLQFTLVFFHSAQVL-IF--DCGYPKLVA   77 (94)
Q Consensus         1 MY~YY~~sa~g~~~~~~lw~Kk~iT~lQivQF~i~~~h~~~~~~~~c~~~~~~qf~~i~~h~~~~l-~~--~C~~p~~~~   77 (94)
                      ||+||+++|+|.|.+|  |..+-+|.+|++||++...-..                    |-.... ..  +|.......
T Consensus       186 MY~YY~lrsl~ir~Pk--~vam~iTtlQi~Qm~i~~~i~~--------------------~v~~~~~~~~~~c~~s~~~~  243 (282)
T KOG3072|consen  186 MYSYYALRSLGIRLPK--SVAMAITTLQIVQMVIGCYIGT--------------------HVYYVKHTHQLLCQQSYKNL  243 (282)
T ss_pred             HHHHHHHHHcCCCCCh--HHHHHHHHHHHHHHHHHHheee--------------------EEEEEEecCCeeeeeeccch
Confidence            8999999999999885  7999999999999987754331                    001111 11  399888888


Q ss_pred             HHHHHHHHHHHHhcc
Q psy11849         78 ALLLLHSTIFFCLFS   92 (94)
Q Consensus        78 ~~~~~~~~~~l~LF~   92 (94)
                      .+..+..+++++||+
T Consensus       244 ~l~~~my~syfvLf~  258 (282)
T KOG3072|consen  244 SLCFLMYISYFVLFA  258 (282)
T ss_pred             hhHHHHHHHHHHHHH
Confidence            899999999999986

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00