Psyllid ID: psy11901

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Protein Sequence
MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKICRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA
Secondary Structure (PSIPRED)
cccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHccccccccccccccccccccccEcccHHHHcccccccccccccccccEEEccccccccccccHHHHHHccccHHcccEEEEccccccccc
Coil and Loop (DISEMBL)
mvcskcekklgkvitpdnwksgsrntiesggrrigenkaltaskarfnpytqkfesckicrQKVHQVGSHYCQACAYKKGICAMCGKKLLDVknykqsaa
Flexible Loop (DISEMBL)
mvcskcekklgkvitpdnwksgsrntiesggrrigenkaltaskarfnpytQKFESCKICRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVknykqsaa
Low Complexity Region (SEG)
MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKICRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA
Disordered region (IsUnstruct)
********************************************ARFNPYTQKFESCKICRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVK*******
Disordered Region (DISOPRED)
MVCSKCEKKLGKVITPD**************************************SCKICRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYK****
Disordered Region (DISEMBL)
MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKICRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA
Disordered Region (DISPRO)
*VCSKCEKKLGKVITPDNWKS**********RRIGENKALTASKARFNPYTQKFESCKICRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNY*****
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKICRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	100	2.2.26 [Sep-21-2011]
Q792Q4	101	Cysteine-rich PDZ-binding	yes	N/A	1.0	0.990	0.722	3e-39
O70333	101	Cysteine-rich PDZ-binding	yes	N/A	1.0	0.990	0.722	3e-39
Q9P021	101	Cysteine-rich PDZ-binding	yes	N/A	1.0	0.990	0.722	5e-39
Q3ZC66	101	Cysteine-rich PDZ-binding	yes	N/A	1.0	0.990	0.722	5e-39
Q6NU28	101	Cysteine-rich PDZ-binding	N/A	N/A	1.0	0.990	0.722	3e-38
Q567Z6	101	Cysteine-rich PDZ-binding	yes	N/A	1.0	0.990	0.693	8e-38
Q5ZKB6	101	Cysteine-rich PDZ-binding	yes	N/A	1.0	0.990	0.702	9e-38
Q1WCC0	101	Cysteine-rich PDZ-binding	N/A	N/A	1.0	0.990	0.702	1e-37

>sp|Q792Q4|CRIPT_RAT Cysteine-rich PDZ-binding protein OS=Rattus norvegicus GN=Cript PE=1 SV=1

 Score =  159 bits (403), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 73/101 (72%), Positives = 86/101 (85%), Gaps = 1/101 (0%)

Query: 1   MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 59
           MVC KCEKKLG+VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF +C+I
Sbjct: 1   MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60

Query: 60  CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA 100
           C+  VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++ 
Sbjct: 61  CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSV 101

Involved in the cytoskeletal anchoring of DLG4 in excitatory synapses.
Rattus norvegicus (taxid: 10116)

>sp|O70333|CRIPT_MOUSE Cysteine-rich PDZ-binding protein OS=Mus musculus GN=Cript PE=1 SV=1

 Score =  159 bits (403), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 73/101 (72%), Positives = 86/101 (85%), Gaps = 1/101 (0%)

Query: 1   MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 59
           MVC KCEKKLG+VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF +C+I
Sbjct: 1   MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60

Query: 60  CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA 100
           C+  VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++ 
Sbjct: 61  CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSV 101

Involved in the cytoskeletal anchoring of DLG4 in excitatory synapses.

Mus musculus (taxid: 10090)

>sp|Q9P021|CRIPT_HUMAN Cysteine-rich PDZ-binding protein OS=Homo sapiens GN=CRIPT PE=1 SV=1

 Score =  159 bits (402), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 73/101 (72%), Positives = 85/101 (84%), Gaps = 1/101 (0%)

Query: 1   MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 59
           MVC KCEKKLG VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF +C+I
Sbjct: 1   MVCEKCEKKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60

Query: 60  CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA 100
           C+  VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++ 
Sbjct: 61  CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSV 101

Involved in the cytoskeletal anchoring of DLG4 in excitatory synapses.

Homo sapiens (taxid: 9606)

>sp|Q3ZC66|CRIPT_BOVIN Cysteine-rich PDZ-binding protein OS=Bos taurus GN=CRIPT PE=1 SV=1

 Score =  159 bits (402), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 73/101 (72%), Positives = 85/101 (84%), Gaps = 1/101 (0%)

Query: 1   MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 59
           MVC KCEKKLG VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF +C+I
Sbjct: 1   MVCEKCEKKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60

Query: 60  CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA 100
           C+  VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++ 
Sbjct: 61  CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSV 101

Involved in the cytoskeletal anchoring of DLG4 in excitatory synapses.

Bos taurus (taxid: 9913)

>sp|Q6NU28|CRIPT_XENLA Cysteine-rich PDZ-binding protein OS=Xenopus laevis GN=cript PE=3 SV=1

 Score =  156 bits (395), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 73/101 (72%), Positives = 84/101 (83%), Gaps = 1/101 (0%)

Query: 1   MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 59
           MVC KCEKKLG VITPD WKSG+RNT ESGGR++ ENKALT+  ARFNPY + KF  C+I
Sbjct: 1   MVCDKCEKKLGTVITPDTWKSGARNTTESGGRKLNENKALTSKTARFNPYGKNKFAICRI 60

Query: 60  CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA 100
           C+  VHQ GSHYCQ CAYKKGICAMCGKK+L+ KNYKQ++ 
Sbjct: 61  CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLETKNYKQTSV 101

Xenopus laevis (taxid: 8355)

>sp|Q567Z6|CRIPT_DANRE Cysteine-rich PDZ-binding protein OS=Danio rerio GN=cript PE=3 SV=1

 Score =  155 bits (391), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 70/101 (69%), Positives = 84/101 (83%), Gaps = 1/101 (0%)

Query: 1   MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQK-FESCKI 59
           MVC KCEKKLG+VITPD WK G+RNT ESGGR++ ENK LT+ KARF+PY +  F +C+I
Sbjct: 1   MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKLNENKMLTSKKARFDPYGKSGFATCRI 60

Query: 60  CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA 100
           C+  VHQ GSHYCQ CAYKKGICAMCGKK++D KNYKQ++ 
Sbjct: 61  CKSSVHQSGSHYCQGCAYKKGICAMCGKKVIDTKNYKQTSV 101

Danio rerio (taxid: 7955)

>sp|Q5ZKB6|CRIPT_CHICK Cysteine-rich PDZ-binding protein OS=Gallus gallus GN=CRIPT PE=3 SV=1

 Score =  155 bits (391), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 71/101 (70%), Positives = 84/101 (83%), Gaps = 1/101 (0%)

Query: 1   MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 59
           MVC KCE+KLG VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF  C+I
Sbjct: 1   MVCEKCERKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFAICRI 60

Query: 60  CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA 100
           C+  VHQ GSHYCQ CAYKKGIC+MCGKK+LD KNYKQ++ 
Sbjct: 61  CKSSVHQPGSHYCQGCAYKKGICSMCGKKVLDTKNYKQTSV 101

Gallus gallus (taxid: 9031)

>sp|Q1WCC0|CRIPT_ICTPU Cysteine-rich PDZ-binding protein OS=Ictalurus punctatus GN=cript PE=3 SV=1

 Score =  154 bits (390), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 71/101 (70%), Positives = 83/101 (82%), Gaps = 1/101 (0%)

Query: 1   MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQK-FESCKI 59
           MVC KCEKKLG+VITPD WK G+RNT ESGGR+I ENK LT+ KA F+PY +  F +C+I
Sbjct: 1   MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKINENKMLTSKKAGFDPYGKSGFSTCRI 60

Query: 60  CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA 100
           C+  VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++ 
Sbjct: 61  CKSSVHQSGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSV 101

Ictalurus punctatus (taxid: 7998)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	100
307169189	1082	Histone demethylase UTX [Camponotus flor	0.99	0.091	0.828	1e-45
340710093	100	PREDICTED: cysteine-rich PDZ-binding pro	0.99	0.99	0.828	2e-43
383853702	100	PREDICTED: cysteine-rich PDZ-binding pro	0.99	0.99	0.818	2e-43
307206956	100	Cysteine-rich PDZ-binding protein [Harpe	0.99	0.99	0.818	2e-43
110771988	100	PREDICTED: cysteine-rich PDZ-binding pro	0.99	0.99	0.818	3e-43
357627435	507	putative postsynaptic protein CRIPT [Dan	0.97	0.191	0.814	4e-43
91092996	100	PREDICTED: similar to Cysteine-rich PDZ-	1.0	1.0	0.82	4e-43
322798625	100	hypothetical protein SINV_08093 [Solenop	0.99	0.99	0.828	4e-43
332023190	100	Cysteine-rich PDZ-binding protein [Acrom	1.0	1.0	0.81	9e-43
156548596	100	PREDICTED: cysteine-rich PDZ-binding pro	1.0	1.0	0.78	3e-42

>gi|307169189|gb|EFN62005.1| Histone demethylase UTX [Camponotus floridanus]

 Score =  186 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 82/99 (82%), Positives = 92/99 (92%)

Query: 1    MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 60
            MVC KCEKKLGKVITPD WK+G+RNT+ESGGR++GENKAL+A KARFNPYT KFE C+IC
Sbjct: 983  MVCEKCEKKLGKVITPDPWKTGARNTVESGGRQVGENKALSAGKARFNPYTTKFEICRIC 1042

Query: 61   RQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 99
            RQKVHQVGSHYCQ+CAYKK ICAMCGKKL++ KNYKQSA
Sbjct: 1043 RQKVHQVGSHYCQSCAYKKAICAMCGKKLMNTKNYKQSA 1081

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340710093|ref|XP_003393631.1| PREDICTED: cysteine-rich PDZ-binding protein-like [Bombus terrestris] gi|350413867|ref|XP_003490138.1| PREDICTED: cysteine-rich PDZ-binding protein-like [Bombus impatiens]

 Score =  179 bits (455), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 82/99 (82%), Positives = 91/99 (91%)

Query: 1  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 60
          MVC KCEKKLGKVITPD WKSG+RNT+ESGGR++GENKAL+A KARFNPYT  FE+C+IC
Sbjct: 1  MVCEKCEKKLGKVITPDPWKSGARNTVESGGRKVGENKALSAGKARFNPYTVTFETCRIC 60

Query: 61 RQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 99
          RQKVHQVGSHYCQ+CAYKK ICAMCGKKL+  KNYKQSA
Sbjct: 61 RQKVHQVGSHYCQSCAYKKAICAMCGKKLMSTKNYKQSA 99

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383853702|ref|XP_003702361.1| PREDICTED: cysteine-rich PDZ-binding protein-like [Megachile rotundata]

 Score =  179 bits (454), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 81/99 (81%), Positives = 91/99 (91%)

Query: 1  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 60
          MVC KCEKKLG+VITPD WKSG+RNT+ESGGR++GENKAL+A KARFNPYT  FE+C+IC
Sbjct: 1  MVCEKCEKKLGRVITPDPWKSGARNTVESGGRKVGENKALSAGKARFNPYTATFETCRIC 60

Query: 61 RQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 99
          RQKVHQVGSHYCQ+CAYKK ICAMCGKKL+  KNYKQSA
Sbjct: 61 RQKVHQVGSHYCQSCAYKKAICAMCGKKLMSTKNYKQSA 99

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307206956|gb|EFN84800.1| Cysteine-rich PDZ-binding protein [Harpegnathos saltator]

 Score =  179 bits (453), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 81/99 (81%), Positives = 92/99 (92%)

Query: 1  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 60
          MVC KC KKLG VITPD WK+G+RNT+ESGGR++GENKAL+A KARF PYT KFESC+IC
Sbjct: 1  MVCEKCAKKLGTVITPDPWKAGARNTVESGGRKVGENKALSAGKARFTPYTTKFESCRIC 60

Query: 61 RQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 99
          RQKVHQVGSHYCQ+CAYKKGICAMCGK+LL++KNYKQSA
Sbjct: 61 RQKVHQVGSHYCQSCAYKKGICAMCGKRLLNIKNYKQSA 99

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|110771988|ref|XP_001120258.1| PREDICTED: cysteine-rich PDZ-binding protein [Apis mellifera] gi|380026821|ref|XP_003697139.1| PREDICTED: cysteine-rich PDZ-binding protein-like [Apis florea]

 Score =  178 bits (452), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 81/99 (81%), Positives = 91/99 (91%)

Query: 1  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 60
          MVC KCEKKLGKVITPD WK+G+RNT+ESGGR++GENKAL+A KARFNPYT  FE+C+IC
Sbjct: 1  MVCEKCEKKLGKVITPDPWKNGARNTVESGGRKVGENKALSAGKARFNPYTTTFETCRIC 60

Query: 61 RQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 99
          RQKVHQVGSHYCQ+CAYKK ICAMCGKKL+  KNYKQSA
Sbjct: 61 RQKVHQVGSHYCQSCAYKKAICAMCGKKLMSTKNYKQSA 99

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357627435|gb|EHJ77123.1| putative postsynaptic protein CRIPT [Danaus plexippus]

 Score =  178 bits (452), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 79/97 (81%), Positives = 88/97 (90%)

Query: 1  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 60
          MVC KCEKKLG+VITPD WK+G+RNT+ESGGR++GENKALTA KAR+NPYT KF  CKIC
Sbjct: 1  MVCDKCEKKLGRVITPDPWKTGARNTVESGGRKVGENKALTAKKARYNPYTSKFYECKIC 60

Query: 61 RQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQ 97
          R KVHQVGSHYCQACAYKKGICAMCGKK+LD  NY+Q
Sbjct: 61 RTKVHQVGSHYCQACAYKKGICAMCGKKILDTSNYRQ 97

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91092996|ref|XP_968315.1| PREDICTED: similar to Cysteine-rich PDZ-binding protein (Cysteine-rich interactor of PDZ three) (Cysteine-rich interactor of PDZ3) [Tribolium castaneum] gi|270003175|gb|EEZ99622.1| hypothetical protein TcasGA2_TC002140 [Tribolium castaneum]

 Score =  178 bits (451), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 82/100 (82%), Positives = 90/100 (90%)

Query: 1   MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 60
           MVC KC+KKLGKVITPD WKSG+RNT ESGGR++ ENKALTASK RFNPYT  FE+C+IC
Sbjct: 1   MVCEKCQKKLGKVITPDPWKSGARNTTESGGRKVNENKALTASKNRFNPYTSSFETCRIC 60

Query: 61  RQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA 100
           RQKVHQVGSHYCQ+CAYKKGICAMCGKKLL  KNYKQS+ 
Sbjct: 61  RQKVHQVGSHYCQSCAYKKGICAMCGKKLLSTKNYKQSST 100

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322798625|gb|EFZ20229.1| hypothetical protein SINV_08093 [Solenopsis invicta]

 Score =  178 bits (451), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 82/99 (82%), Positives = 90/99 (90%)

Query: 1  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 60
          MVC KCEKKLGKVITPD WK+G+RNT ESGGR++GENKAL+A KARFNPYT KFE C+IC
Sbjct: 1  MVCEKCEKKLGKVITPDPWKTGARNTTESGGRKVGENKALSAGKARFNPYTTKFEICRIC 60

Query: 61 RQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 99
          RQKVHQVGSHYCQ+CAYKK ICAMCGKKL+  KNYKQSA
Sbjct: 61 RQKVHQVGSHYCQSCAYKKAICAMCGKKLMSTKNYKQSA 99

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332023190|gb|EGI63446.1| Cysteine-rich PDZ-binding protein [Acromyrmex echinatior]

 Score =  177 bits (448), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 81/100 (81%), Positives = 90/100 (90%)

Query: 1   MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 60
           MVC KCEKKLGKVITPD WK+G+RNT ESGGR++GENKAL+A KARFNPYT KFE C+IC
Sbjct: 1   MVCEKCEKKLGKVITPDPWKTGARNTTESGGRKVGENKALSAGKARFNPYTTKFEICRIC 60

Query: 61  RQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA 100
           RQKVHQVGSHYCQ+CAYKK IC+MCGKKL+  KNYKQSA 
Sbjct: 61  RQKVHQVGSHYCQSCAYKKAICSMCGKKLMSTKNYKQSAT 100

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156548596|ref|XP_001607753.1| PREDICTED: cysteine-rich PDZ-binding protein-like [Nasonia vitripennis]

 Score =  175 bits (444), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 78/100 (78%), Positives = 91/100 (91%)

Query: 1   MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 60
           MVC KCEKKLGKVITPD WK+G+RNT+ESGGR++GENKAL+ +K RFNPYT KFE+C+IC
Sbjct: 1   MVCDKCEKKLGKVITPDPWKAGARNTVESGGRKVGENKALSTAKNRFNPYTAKFEACRIC 60

Query: 61  RQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA 100
           RQKVHQ GSHYCQ+CAYKK ICAMCGKKL+  KNY+QSA+
Sbjct: 61  RQKVHQAGSHYCQSCAYKKAICAMCGKKLMSTKNYRQSAS 100

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	100
MGI|MGI:1929655	101	Cript "cysteine-rich PDZ-bindi	0.99	0.980	0.73	8.7e-40
RGD|621545	101	Cript "cysteine-rich PDZ-bindi	0.99	0.980	0.73	8.7e-40
UNIPROTKB|Q3ZC66	101	CRIPT "Cysteine-rich PDZ-bindi	0.99	0.980	0.73	1.8e-39
UNIPROTKB|Q9P021	101	CRIPT "Cysteine-rich PDZ-bindi	0.99	0.980	0.73	1.8e-39
UNIPROTKB|Q5ZKB6	101	CRIPT "Cysteine-rich PDZ-bindi	0.99	0.980	0.71	2.1e-38
ZFIN|ZDB-GENE-050417-451	101	cript "cysteine-rich PDZ-bindi	0.99	0.980	0.7	2.1e-38
TAIR|locus:2195738	98	AT1G61780 "AT1G61780" [Arabido	0.96	0.979	0.612	6.2e-30
WB|WBGene00044614	99	C36B1.14 [Caenorhabditis elega	0.95	0.959	0.43	9.5e-18
ASPGD|ASPL0000067618	135	AN7283 [Emericella nidulans (t	0.64	0.474	0.447	3.2e-10

MGI|MGI:1929655 Cript "cysteine-rich PDZ-binding protein" [Mus musculus (taxid:10090)]

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 73/100 (73%), Positives = 86/100 (86%)

Query:     1 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 59
             MVC KCEKKLG+VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF +C+I
Sbjct:     1 MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60

Query:    60 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 99
             C+  VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++
Sbjct:    61 CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTS 100

GO:0005737 "cytoplasm" evidence=IEA

GO:0014069 "postsynaptic density" evidence=ISO

GO:0030054 "cell junction" evidence=IEA

GO:0030165 "PDZ domain binding" evidence=ISO

GO:0030425 "dendrite" evidence=ISO

GO:0031122 "cytoplasmic microtubule organization" evidence=ISO

GO:0032403 "protein complex binding" evidence=ISO

GO:0042995 "cell projection" evidence=IEA

GO:0043025 "neuronal cell body" evidence=ISO

GO:0043197 "dendritic spine" evidence=ISO

GO:0043198 "dendritic shaft" evidence=ISO

GO:0045184 "establishment of protein localization" evidence=ISO

GO:0045202 "synapse" evidence=IEA

RGD|621545 Cript "cysteine-rich PDZ-binding protein" [Rattus norvegicus (taxid:10116)]

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 73/100 (73%), Positives = 86/100 (86%)

Query:     1 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 59
             MVC KCEKKLG+VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF +C+I
Sbjct:     1 MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60

Query:    60 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 99
             C+  VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++
Sbjct:    61 CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTS 100

GO:0005737 "cytoplasm" evidence=IEA

GO:0014069 "postsynaptic density" evidence=IDA

GO:0030054 "cell junction" evidence=IEA

GO:0030165 "PDZ domain binding" evidence=IDA

GO:0030425 "dendrite" evidence=IDA

GO:0031122 "cytoplasmic microtubule organization" evidence=IDA

GO:0032403 "protein complex binding" evidence=IPI

GO:0043025 "neuronal cell body" evidence=IDA

GO:0043197 "dendritic spine" evidence=IDA

GO:0043198 "dendritic shaft" evidence=IDA

GO:0045184 "establishment of protein localization" evidence=IDA

UNIPROTKB|Q3ZC66 CRIPT "Cysteine-rich PDZ-binding protein" [Bos taurus (taxid:9913)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 73/100 (73%), Positives = 85/100 (85%)

Query:     1 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 59
             MVC KCEKKLG VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF +C+I
Sbjct:     1 MVCEKCEKKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60

Query:    60 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 99
             C+  VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++
Sbjct:    61 CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTS 100

GO:0045202 "synapse" evidence=IEA

GO:0043197 "dendritic spine" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

UNIPROTKB|Q9P021 CRIPT "Cysteine-rich PDZ-binding protein" [Homo sapiens (taxid:9606)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 73/100 (73%), Positives = 85/100 (85%)

Query:     1 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 59
             MVC KCEKKLG VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF +C+I
Sbjct:     1 MVCEKCEKKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60

Query:    60 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 99
             C+  VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++
Sbjct:    61 CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTS 100

GO:0030054 "cell junction" evidence=IEA

GO:0014069 "postsynaptic density" evidence=IEA

GO:0030165 "PDZ domain binding" evidence=IEA

GO:0031122 "cytoplasmic microtubule organization" evidence=IEA

GO:0032403 "protein complex binding" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0043198 "dendritic shaft" evidence=IEA

GO:0045184 "establishment of protein localization" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|Q5ZKB6 CRIPT "Cysteine-rich PDZ-binding protein" [Gallus gallus (taxid:9031)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 71/100 (71%), Positives = 84/100 (84%)

Query:     1 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 59
             MVC KCE+KLG VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF  C+I
Sbjct:     1 MVCEKCERKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFAICRI 60

Query:    60 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 99
             C+  VHQ GSHYCQ CAYKKGIC+MCGKK+LD KNYKQ++
Sbjct:    61 CKSSVHQPGSHYCQGCAYKKGICSMCGKKVLDTKNYKQTS 100

GO:0005737 "cytoplasm" evidence=IEA

ZFIN|ZDB-GENE-050417-451 cript "cysteine-rich PDZ-binding protein" [Danio rerio (taxid:7955)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 70/100 (70%), Positives = 84/100 (84%)

Query:     1 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQK-FESCKI 59
             MVC KCEKKLG+VITPD WK G+RNT ESGGR++ ENK LT+ KARF+PY +  F +C+I
Sbjct:     1 MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKLNENKMLTSKKARFDPYGKSGFATCRI 60

Query:    60 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 99
             C+  VHQ GSHYCQ CAYKKGICAMCGKK++D KNYKQ++
Sbjct:    61 CKSSVHQSGSHYCQGCAYKKGICAMCGKKVIDTKNYKQTS 100

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA

TAIR|locus:2195738 AT1G61780 "AT1G61780" [Arabidopsis thaliana (taxid:3702)]

 Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
 Identities = 60/98 (61%), Positives = 71/98 (72%)

Query:     1 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 60
             MVC KCEKKL KVI PD WK G+RN  E GGR+I ENK L+  K R++PY+     C IC
Sbjct:     1 MVCDKCEKKLSKVIVPDKWKDGARNVTEGGGRKINENKLLS-KKNRWSPYSTCTTKCMIC 59

Query:    61 RQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQS 98
             +Q+VHQ G  YC  CAY KG+CAMCGK++LD K YKQS
Sbjct:    60 KQQVHQDGK-YCHTCAYSKGVCAMCGKQVLDTKMYKQS 96

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

WB|WBGene00044614 C36B1.14 [Caenorhabditis elegans (taxid:6239)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 43/100 (43%), Positives = 58/100 (58%)

Query:     1 MVCSKCEKKLGKVITPDNW--KSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCK 58
             MVC  CEKKL K++  D +  K  +RN   SG + +     L   + +      K   CK
Sbjct:     1 MVCGDCEKKLTKIVGVDPYRNKKVNRNADGSGPKTVTTKNRLIGVQKKATIVGAK---CK 57

Query:    59 ICRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQS 98
             +C+  +HQ GSHYC  CAY+KGICAMCGKK+ + K  +QS
Sbjct:    58 LCKMLIHQPGSHYCSTCAYQKGICAMCGKKIQNTKGLRQS 97

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0009790 "embryo development" evidence=IMP

GO:0001703 "gastrulation with mouth forming first" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0032502 "developmental process" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

ASPGD|ASPL0000067618 AN7283 [Emericella nidulans (taxid:162425)]

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 30/67 (44%), Positives = 38/67 (56%)

Query:    23 SRNTIESGGRRIGENKALTASKARFNPYTQKFESCKICRQKVHQVGSHYCQACAYKKGIC 82
             +R     G   + +NK L+A KA+ NPY     SC +C+ K  Q G  YCQ CAY+K  C
Sbjct:    53 NRTKATLGNTGVSKNKLLSA-KAK-NPYAAYSSSCDMCKAKTEQ-GRKYCQRCAYQKNAC 109

Query:    83 AMCGKKL 89
              MCGK L
Sbjct:   110 PMCGKSL 116


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.130   0.409    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      100       100   0.00091  102 3  11 22  0.39    30
                                                     29  0.47    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  584 (62 KB)
  Total size of DFA:  136 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.52u 0.13s 11.65t   Elapsed:  00:00:00
  Total cpu time:  11.52u 0.13s 11.65t   Elapsed:  00:00:00
  Start:  Thu Aug 15 13:25:39 2013   End:  Thu Aug 15 13:25:39 2013

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5ZKB6	CRIPT_CHICK	No assigned EC number	0.7029	1.0	0.9900	yes	N/A
Q3ZC66	CRIPT_BOVIN	No assigned EC number	0.7227	1.0	0.9900	yes	N/A
O70333	CRIPT_MOUSE	No assigned EC number	0.7227	1.0	0.9900	yes	N/A
Q6NU28	CRIPT_XENLA	No assigned EC number	0.7227	1.0	0.9900	N/A	N/A
Q1WCC0	CRIPT_ICTPU	No assigned EC number	0.7029	1.0	0.9900	N/A	N/A
Q792Q4	CRIPT_RAT	No assigned EC number	0.7227	1.0	0.9900	yes	N/A
Q567Z6	CRIPT_DANRE	No assigned EC number	0.6930	1.0	0.9900	yes	N/A
Q9P021	CRIPT_HUMAN	No assigned EC number	0.7227	1.0	0.9900	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	100
pfam10235	89	pfam10235, Cript, Microtubule-associated protein C	5e-34

>gnl|CDD|220641 pfam10235, Cript, Microtubule-associated protein CRIPT

 Score =  112 bits (281), Expect = 5e-34
 Identities = 58/90 (64%), Positives = 67/90 (74%), Gaps = 1/90 (1%)

Query: 11  GKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKICRQKVHQVGSH 70
            K+ TPD WK G+RNT   GGR+I +NK L+  KA+ NPY Q    CKIC+ KVHQ GS 
Sbjct: 1   TKLATPDVWKKGARNTATLGGRKINKNKLLS-KKAKRNPYAQYSSKCKICKTKVHQKGSK 59

Query: 71  YCQACAYKKGICAMCGKKLLDVKNYKQSAA 100
           YCQ CAYKKGICAMCGKK+LD KNYKQS+ 
Sbjct: 60  YCQRCAYKKGICAMCGKKILDTKNYKQSSV 89

The CRIPT protein is a cytoskeletal protein involved in microtubule production. The C-terminal domain is essential for binding to the PDZ3 domain of the SAP90 protein, one of a super-family of PDZ-containing proteins that play an important role in coupling the membrane ion channels with their signalling partners. SAP90 is concentrated in the post synaptic density of glutamatergic neurons. Length = 89

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	100
KOG3476|consensus	100		100.0
PF10235	90	Cript: Microtubule-associated protein CRIPT; Inter	100.0
PF10217	92	DUF2039: Uncharacterized conserved protein (DUF203	94.79
COG5152	259	Uncharacterized conserved protein, contains RING a	90.87
PF12773	50	DZR: Double zinc ribbon	90.37
KOG3241|consensus	227		89.6

>KOG3476|consensus

Probab=100.00  E-value=2.5e-58  Score=320.50  Aligned_cols=100  Identities=68%  Similarity=1.234  Sum_probs=97.9

Q ss_pred             CcchHHHhhhcCccCCCCCCCCCcccccCCCeeccccchhhhhhhhcCCCcccCccchhhhhhhccCCCccCcccccccc
Q psy11901          1 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKICRQKVHQVGSHYCQACAYKKG   80 (100)
Q Consensus         1 MVC~KCeKKL~kl~tPd~~k~gs~~~~~~g~rkv~eNKlLs~~k~r~~Py~~~~~~C~~CK~~v~q~g~~YCq~CAYkkG   80 (100)
                      |||++|||||++|++|||||+|+||++++|+|+|+|||.|.+.++||+||+..+.+|+|||+.|||+|+||||.|||+||
T Consensus         1 MVC~kCEkKLskvi~pd~wr~garn~~~sGgrkinenkaL~s~k~r~~p~gt~~~kC~iCk~~vHQ~GshYC~tCAY~Kg   80 (100)
T KOG3476|consen    1 MVCEKCEKKLSKVIGPDPWRDGARNTTESGGRKINENKALISKKKRATPYGTALAKCRICKQLVHQPGSHYCQTCAYKKG   80 (100)
T ss_pred             CchhHHHHHhccccccCcccccccccCCCCCeecchhhhhhhhhhhcCccccccchhHHHHHHhcCCcchhHhHhhhhhh
Confidence            99999999999999999999999999999999999999888889999999999999999999999999999999999999


Q ss_pred             cccccCcccccccccccccC
Q psy11901         81 ICAMCGKKLLDVKNYKQSAA  100 (100)
Q Consensus        81 iCamCGKki~dt~~ykqS~~  100 (100)
                      |||||||+|+||++|+||++
T Consensus        81 iCAMCGKki~nTK~ykQsst  100 (100)
T KOG3476|consen   81 ICAMCGKKILNTKNYKQSST  100 (100)
T ss_pred             HHHHhhhHhhccccccccCC
Confidence            99999999999999999986

>PF10235 Cript: Microtubule-associated protein CRIPT; InterPro: IPR019367 The CRIPT protein is a cytoskeletal protein involved in microtubule production

Probab=100.00  E-value=1.5e-49  Score=273.60  Aligned_cols=88  Identities=66%  Similarity=1.194  Sum_probs=84.0

Q ss_pred             cCccCCCCCCCCC--cccccCCCeeccccchhhhhhhhcCCCcccCccchhhhhhhccCCCccCcccccccccccccCcc
Q psy11901         11 GKVITPDNWKSGS--RNTIESGGRRIGENKALTASKARFNPYTQKFESCKICRQKVHQVGSHYCQACAYKKGICAMCGKK   88 (100)
Q Consensus        11 ~kl~tPd~~k~gs--~~~~~~g~rkv~eNKlLs~~k~r~~Py~~~~~~C~~CK~~v~q~g~~YCq~CAYkkGiCamCGKk   88 (100)
                      ++||||||||+|+  +++.++|+|+||||||||+. ++ |||++++++|+|||++|||+|+||||.|||++||||||||+
T Consensus         1 tklatPd~~k~~~~~~~~~~~g~r~i~eNKlLs~~-~~-nPy~~~~~~C~~CK~~v~q~g~~YCq~CAYkkGiCamCGKk   78 (90)
T PF10235_consen    1 TKLATPDPWKKGAMYRNTAESGGRKIGENKLLSKK-KK-NPYAPYSSKCKICKTKVHQPGAKYCQTCAYKKGICAMCGKK   78 (90)
T ss_pred             CccccCCccccCcccccccCCCCccccceeeeccc-cc-CcccccCccccccccccccCCCccChhhhcccCcccccCCe
Confidence            4799999999999  99999999999999999884 34 99999999999999999999999999999999999999999


Q ss_pred             cccccccccccC
Q psy11901         89 LLDVKNYKQSAA  100 (100)
Q Consensus        89 i~dt~~ykqS~~  100 (100)
                      |+||++|+||+|
T Consensus        79 i~dtk~ykqs~v   90 (90)
T PF10235_consen   79 ILDTKNYKQSSV   90 (90)
T ss_pred             ecccccccccCC
Confidence            999999999987

This C-terminal domain is essential for binding to the PDZ3 domain of the SAP90 protein, one of a super-family of PDZ-containing proteins that play an important role in coupling the membrane ion channels with their signalling partners [].

>PF10217 DUF2039: Uncharacterized conserved protein (DUF2039); InterPro: IPR019351 This entry is a region of approximately 100 residues containing three pairs of cysteine residues

Probab=94.79  E-value=0.0037  Score=43.60  Aligned_cols=35  Identities=34%  Similarity=0.768  Sum_probs=31.0

Q ss_pred             Cccchhhhh-hhccCCCccCcccccccccccccCcc
Q psy11901         54 FESCKICRQ-KVHQVGSHYCQACAYKKGICAMCGKK   88 (100)
Q Consensus        54 ~~~C~~CK~-~v~q~g~~YCq~CAYkkGiCamCGKk   88 (100)
                      ..+|-.|.+ .|.+.=|..|+.||-..++||.||++
T Consensus        55 p~kC~~C~qktVk~AYh~iC~~Ca~~~~vCaKC~k~   90 (92)
T PF10217_consen   55 PKKCNKCQQKTVKHAYHVICDPCAKELKVCAKCGKP   90 (92)
T ss_pred             CccccccccchHHHHHHHHHHHHHHhhccCcccCCC
Confidence            579999997 66776788999999999999999986

The region is conserved from plants to humans but its function is unknown.

>COG5152 Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only]

Probab=90.87  E-value=0.062  Score=43.15  Aligned_cols=49  Identities=33%  Similarity=0.876  Sum_probs=34.5

Q ss_pred             cccchhhhhhhhcCCCcccCccchhhhhhh-----ccCCCccCcccc---cccc-cccccCccc
Q psy11901         35 GENKALTASKARFNPYTQKFESCKICRQKV-----HQVGSHYCQACA---YKKG-ICAMCGKKL   89 (100)
Q Consensus        35 ~eNKlLs~~k~r~~Py~~~~~~C~~CK~~v-----~q~g~~YCq~CA---YkkG-iCamCGKki   89 (100)
                      .|.++++-. .-.-||     .|.|||...     ..-||++|..||   |++| .|-.||+..
T Consensus       183 Ee~~v~~~~-~e~IPF-----~C~iCKkdy~spvvt~CGH~FC~~Cai~~y~kg~~C~~Cgk~t  240 (259)
T COG5152         183 EEAPVISGP-GEKIPF-----LCGICKKDYESPVVTECGHSFCSLCAIRKYQKGDECGVCGKAT  240 (259)
T ss_pred             hhcccccCC-CCCCce-----eehhchhhccchhhhhcchhHHHHHHHHHhccCCcceecchhh
Confidence            345555432 233466     899999743     344999999999   6676 799999864

>PF12773 DZR: Double zinc ribbon

Probab=90.37  E-value=0.18  Score=29.76  Aligned_cols=33  Identities=24%  Similarity=0.673  Sum_probs=18.7

Q ss_pred             chhhhhhhccCCCccCcccccccc-------cccccCcccc
Q psy11901         57 CKICRQKVHQVGSHYCQACAYKKG-------ICAMCGKKLL   90 (100)
Q Consensus        57 C~~CK~~v~q~g~~YCq~CAYkkG-------iCamCGKki~   90 (100)
                      |..|.+.+.. ++.||..|-..-.       +|.-||..+.
T Consensus         1 Cp~Cg~~~~~-~~~fC~~CG~~l~~~~~~~~~C~~Cg~~~~   40 (50)
T PF12773_consen    1 CPHCGTPNPD-DAKFCPHCGTPLPPPDQSKKICPNCGAENP   40 (50)
T ss_pred             CCCcCCcCCc-cccCChhhcCChhhccCCCCCCcCCcCCCc
Confidence            4445555555 4566666655444       5666666654

>KOG3241|consensus

Probab=89.60  E-value=0.03  Score=44.20  Aligned_cols=46  Identities=28%  Similarity=0.755  Sum_probs=37.4

Q ss_pred             hcCCCcccCccchhhhh-hhccCCCccCcccccccccccccCcccccc
Q psy11901         46 RFNPYTQKFESCKICRQ-KVHQVGSHYCQACAYKKGICAMCGKKLLDV   92 (100)
Q Consensus        46 r~~Py~~~~~~C~~CK~-~v~q~g~~YCq~CAYkkGiCamCGKki~dt   92 (100)
                      .|-|.+. ..+|..|+. .|.|.-|..|..||-...+||-|+|.+.++
T Consensus        60 KYKpLt~-akkC~kC~~r~Vk~aYH~~Cr~CA~e~~vCAKC~ks~~~i  106 (227)
T KOG3241|consen   60 KYKPLTE-AKKCQKCTKRNVKQAYHKLCRGCAKEQKVCAKCCKSVDQI  106 (227)
T ss_pred             cccccch-hHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhccHHHh
Confidence            3555554 569999987 778888899999999999999999976543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	100
1m3v_A	122	FLIN4, fusion of the LIM interacting domain of LDB	87.87
2ecy_A	66	TNF receptor-associated factor 3; metal binding pr	86.27
2egp_A	79	Tripartite motif-containing protein 34; ZF-C3HC4 d	85.64
2ecv_A	85	Tripartite motif-containing protein 5; metal bindi	85.54
1g25_A	65	CDK-activating kinase assembly factor MAT1; ring f	85.1
2ecw_A	85	Tripartite motif-containing protein 30; metal bind	82.84

>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3

Probab=87.87  E-value=0.091  Score=34.89  Aligned_cols=36  Identities=17%  Similarity=0.351  Sum_probs=28.5

Q ss_pred             cchhhhhhhc--------cCCCccCcccccc----cccccccCccccc
Q psy11901         56 SCKICRQKVH--------QVGSHYCQACAYK----KGICAMCGKKLLD   91 (100)
Q Consensus        56 ~C~~CK~~v~--------q~g~~YCq~CAYk----kGiCamCGKki~d   91 (100)
                      +|..|+..+.        .+|..||..|-.+    +|.|+.|++.|.+
T Consensus        34 ~C~~C~~~L~~~~~~~~~~~g~~yC~~cy~~~f~~~~~C~~C~~~I~~   81 (122)
T 1m3v_A           34 KCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFGNSGAGGSGGHMGSG   81 (122)
T ss_dssp             CCSSSCCCTTTSEECCEEETTEEECHHHHHHHHCCCCSSSCSSCCSCC
T ss_pred             CcCCCCCcccccCCeEEEECCeeecHHHHHHHcCCCCccccCCCCcCc
Confidence            7888887773        3467899999875    4699999999985

>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=86.27  E-value=0.3  Score=28.63  Aligned_cols=37  Identities=19%  Similarity=0.680  Sum_probs=28.1

Q ss_pred             ccchhhhhhhccC-----CCccCccccc-----ccccccccCccccc
Q psy11901         55 ESCKICRQKVHQV-----GSHYCQACAY-----KKGICAMCGKKLLD   91 (100)
Q Consensus        55 ~~C~~CK~~v~q~-----g~~YCq~CAY-----kkGiCamCGKki~d   91 (100)
                      ..|.||...+..+     ||.||..|..     ....|.+|...+..
T Consensus        16 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~   62 (66)
T 2ecy_A           16 YKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVK   62 (66)
T ss_dssp             EECTTTCCEESSCCCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCT
T ss_pred             CCCCCCChHhcCeeECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCCh
Confidence            4788887755433     8899999986     24579999998864

>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}

Probab=85.64  E-value=0.26  Score=29.39  Aligned_cols=36  Identities=31%  Similarity=0.782  Sum_probs=27.8

Q ss_pred             ccchhhhhhhcc-----CCCccCcccccc-----------cccccccCcccc
Q psy11901         55 ESCKICRQKVHQ-----VGSHYCQACAYK-----------KGICAMCGKKLL   90 (100)
Q Consensus        55 ~~C~~CK~~v~q-----~g~~YCq~CAYk-----------kGiCamCGKki~   90 (100)
                      -.|.||...+..     =||.||..|...           ...|.+|...+.
T Consensus        13 ~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~   64 (79)
T 2egp_A           13 VTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYS   64 (79)
T ss_dssp             CEETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCC
T ss_pred             CCCcCCCcccCCeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCC
Confidence            478888765543     388999999874           668999999885

>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=85.54  E-value=0.32  Score=29.03  Aligned_cols=36  Identities=31%  Similarity=0.774  Sum_probs=28.7

Q ss_pred             ccchhhhhhhcc-----CCCccCcccccc----------cccccccCcccc
Q psy11901         55 ESCKICRQKVHQ-----VGSHYCQACAYK----------KGICAMCGKKLL   90 (100)
Q Consensus        55 ~~C~~CK~~v~q-----~g~~YCq~CAYk----------kGiCamCGKki~   90 (100)
                      ..|.||...+..     =||.||..|...          ...|.+|...+.
T Consensus        20 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~   70 (85)
T 2ecv_A           20 VTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQ   70 (85)
T ss_dssp             CCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSC
T ss_pred             CCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccC
Confidence            478888876543     388999999865          678999999876

>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1

Probab=85.10  E-value=0.19  Score=29.44  Aligned_cols=35  Identities=31%  Similarity=0.789  Sum_probs=25.3

Q ss_pred             cchhhhh-hh---------ccCCCccCccccccc-----ccccccCcccc
Q psy11901         56 SCKICRQ-KV---------HQVGSHYCQACAYKK-----GICAMCGKKLL   90 (100)
Q Consensus        56 ~C~~CK~-~v---------~q~g~~YCq~CAYkk-----GiCamCGKki~   90 (100)
                      .|.||.. ..         ..=||.||..|..+-     ..|.+|++.+.
T Consensus         5 ~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~   54 (65)
T 1g25_A            5 GCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLR   54 (65)
T ss_dssp             CCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCS
T ss_pred             cCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCccc
Confidence            6777777 22         234889999997433     57999999885

>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=82.84  E-value=0.37  Score=28.72  Aligned_cols=36  Identities=28%  Similarity=0.750  Sum_probs=28.4

Q ss_pred             ccchhhhhhhcc-----CCCccCcccccc----------cccccccCcccc
Q psy11901         55 ESCKICRQKVHQ-----VGSHYCQACAYK----------KGICAMCGKKLL   90 (100)
Q Consensus        55 ~~C~~CK~~v~q-----~g~~YCq~CAYk----------kGiCamCGKki~   90 (100)
                      ..|.||...+..     =||.||..|...          ...|.+|...+.
T Consensus        20 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~   70 (85)
T 2ecw_A           20 VTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYP   70 (85)
T ss_dssp             TSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCC
T ss_pred             CCCcCCChhhCcceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCC
Confidence            479999876543     388999999865          668999998876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00