Psyllid ID: psy11937

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300--

MSWSQPIAVESPGKSGAKFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVFSNHLTTHKKFDLKGSTVDREASEKEKEKDLPTFKDNDFVQGGTKIVIGDEAKEKLLETLNADVEFLTNLHLMDYSLLVGIHDCARAEAEELANENNGGGGGADDEDEEDSEGVGDRIPWGTTPPDSPHTLNRETSLQYDGAIIPELDIYAIPSAENAPVKEIYFIALIDVLTHYGVKKQAAKAAKTLKHGANVDGISTCDPEQYGKRFIEFLSKAME

ccccccccccccccccccEEEEccccEEEEEccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEccEEEEEEEEEcccccccccEEEEEEcccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHHHHHHHHHHcccccccccccEEEcHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEHHHHccHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcc

cccccccEcccccccccEEEEEccccEEEEEccHHHHHHHHHHcHHHHHHHHccccccccccEEEEEEEEEcccEEEEEEEcccccccEEEEEEEcccccccccccccHHHHccccccccHHHHHccccEEccHHHHHHHHHHHHHHHHHHHHHccccHEEEEEEccccHHHHHHHccccccccccccccccccccccccHHHHcccccHHHHHHHcccccccccccccccccccccccccccHHEEEEEEHHHHHHccHHHHHHHHHHHHHHccccccEEEEEcHHHHHHHHHHHHHHHcc

mswsqpiavespgksgakfYQSYDRLFIIKTLTSEEVERMHSFLKQyhpyiverhgktllpqylGMYRLTVDGVEHYVVAMRNVFSnhltthkkfdlkgstvdreasekekekdlptfkdndfvqggtkiVIGDEAKEKLLETLNADVEFLTNLHLMDYSLLVGIHDCARAEAEELanenngggggaddedeedsegvgdripwgttppdsphtlnretslqydgaiipeldiyaipsaenapvkeIYFIALIDVLTHYGVKKQAAKAAKTLkhganvdgistcdpeqYGKRFIEFLSKAME

mswsqpiavespgksgakfyQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVFSnhltthkkfdlkgstvdreasekekekdlptfkdndfvqggTKIVIGDEAKEKLLETLNADVEFLTNLHLMDYSLLVGIHDCARAEAEELanenngggggaddedeedSEGVGDRipwgttppdsphtlnRETSLQYDGAIIPELDIYAIPSAENAPVKEIYFIALIDVLTHYGVKKQAAKAAKtlkhganvdgistcdpeqYGKRFIEFLSKAME

MSWSQPIAVESPGKSGAKFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVFSNHLTTHKKFDLKGSTVDREASEKEKEKDLPTFKDNDFVQGGTKIVIGDEAKEKLLETLNADVEFLTNLHLMDYSLLVGIHDCaraeaeelanenngggggaddedeedsegvgdRIPWGTTPPDSPHTLNRETSLQYDGAIIPELDIYAIPSAENAPVKEIYFIALIDVLTHYGVkkqaakaakTLKHGANVDGISTCDPEQYGKRFIEFLSKAME

*****************KFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVFSNHLTTHKKF*************************NDFVQGGTKIVIGDEAKEKLLETLNADVEFLTNLHLMDYSLLVGIHDCAR**************************************************LQYDGAIIPELDIYAIPSAENAPVKEIYFIALIDVLTHYGVKKQAAKAAKTLKHGANVDGISTCDPEQYGKRFIEFL*****

*****************KFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVFSNHLTTHKKFDLKGSTVDRE*********LPTFKDNDFVQGGTKIVIGDEAKEKLLETLNADVEFLTNLHLMDYSLLVGIHDC*************************************************************ELDIYAIPSAENAPVKEIYFIALIDVLTHYGVKKQAAKAAKTLKHGANVDGISTCDPEQYGKRFIEFLSKAME

**************SGAKFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVFSNHLTTHKKFDLKGS*************DLPTFKDNDFVQGGTKIVIGDEAKEKLLETLNADVEFLTNLHLMDYSLLVGIHDCARAEAEE***********************GDRIPWGTTPPDSPHTLNRETSLQYDGAIIPELDIYAIPSAENAPVKEIYFIALIDVLTHYGVKKQAAKAAKTLKHGANVDGISTCDPEQYGKRFIEFLSKAME

****QPIAVE*PGKSGAKFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVFSNHLTTHKKFDLKGSTVDREASEKEKEKDLPTFKDNDFVQGGTKIVIGDEAKEKLLETLNADVEFLTNLHLMDYSLLVGIHDCARAEAE*****************************W***PPDSPHTLNRETSLQYDGAIIPELDIYAIPSAENAPVKEIYFIALIDVLTHYGVKKQAAKAAKTLKHGANVDGISTCDPEQYGKRFIEFLSKAME

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		302	2.2.26 [Sep-21-2011]
O88377		416	Phosphatidylinositol 5-ph	yes	N/A	0.976	0.709	0.554	9e-81
P78356		416	Phosphatidylinositol 5-ph	yes	N/A	0.970	0.704	0.551	1e-79
Q80XI4		416	Phosphatidylinositol 5-ph	yes	N/A	0.970	0.704	0.551	2e-78
Q5F356		405	Phosphatidylinositol 5-ph	no	N/A	0.956	0.713	0.569	9e-78
Q9R0I8		406	Phosphatidylinositol 5-ph	no	N/A	0.943	0.701	0.570	3e-77
O70172		405	Phosphatidylinositol 5-ph	no	N/A	0.943	0.703	0.563	3e-77
P48426		406	Phosphatidylinositol 5-ph	no	N/A	0.943	0.701	0.570	2e-76
O13010		406	Phosphatidylinositol 5-ph	yes	N/A	0.943	0.701	0.563	7e-75
Q6IQE1		416	Phosphatidylinositol 5-ph	no	N/A	0.966	0.701	0.496	4e-66
Q6GL14		419	Phosphatidylinositol 5-ph	no	N/A	0.950	0.684	0.489	4e-64

>sp\|O88377\|PI42B_RAT Phosphatidylinositol 5-phosphate 4-kinase type-2 beta OS=Rattus norvegicus GN=Pip4k2b PE=1 SV=1	Back alignment and function desciption

 Score =  300 bits (768), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 167/301 (55%), Positives = 211/301 (70%), Gaps = 6/301 (1%)

Query: 1   MSWSQPIAVESPGKSGAKFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLL 60
           ++ S PI  +S G+ G +F  +YDR F+IKT++SE+V  MH+ LK+YH +IVE HG TLL
Sbjct: 121 VTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLL 180

Query: 61  PQYLGMYRLTVDGVEHYVVAMRNVFSNHLTTHKKFDLKGSTVDREASEKEKEKDLPTFKD 120
           PQ+LGMYRLTVDGVE Y+V  RNVFS+ LT H+K+DLKGSTV REAS+KEK KDLPTFKD
Sbjct: 181 PQFLGMYRLTVDGVETYMVVTRNVFSHRLTVHRKYDLKGSTVAREASDKEKAKDLPTFKD 240

Query: 121 NDFVQGGTKIVIGDEAKEKLLETLNADVEFLTNLHLMDYSLLVGIHDCARAEAEELANEN 180
           NDF+  G K+ +G+E+K+  LE L  DVEFL  L +MDYSLLVGIHD  RAE EE   E+
Sbjct: 241 NDFLNEGQKLRVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAEQEETEVED 300

Query: 181 NGGGGGADDEDEEDSEGVGDRIPWGTTPPDSPHTLNRETSLQYDGAIIPELDIYAIPSAE 240
                  ++    D  G G    +G TPPDSP  L         G   P +D+YA+ S E
Sbjct: 301 RAEEEECEN----DGVGGGLLCSYG-TPPDSPGNLLSFPRFFGPGEFDPSVDVYAMKSHE 355

Query: 241 NAPVKEIYFIALIDVLTHYGVKKQAAKAAKTLKHGANVDGISTCDPEQYGKRFIEFLSKA 300
           +AP KE+YF+A+ID+LT Y  KK+AA AAKT+KHGA  + IST +PEQY KRF EF+S  
Sbjct: 356 SAPKKEVYFMAIIDILTPYDAKKKAAHAAKTVKHGAGAE-ISTVNPEQYSKRFNEFMSNI 414

Query: 301 M 301
           +
Sbjct: 415 L 415

Participates in the biosynthesis of phosphatidylinositol 4,5-bisphosphate.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 4EC: 9

>sp\|P78356\|PI42B_HUMAN Phosphatidylinositol 5-phosphate 4-kinase type-2 beta OS=Homo sapiens GN=PIP4K2B PE=1 SV=1	Back alignment and function description

>sp\|Q80XI4\|PI42B_MOUSE Phosphatidylinositol 5-phosphate 4-kinase type-2 beta OS=Mus musculus GN=Pip4k2b PE=1 SV=1	Back alignment and function description

>sp\|Q5F356\|PI42A_CHICK Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha OS=Gallus gallus GN=PIP4K2A PE=2 SV=1	Back alignment and function description

>sp\|Q9R0I8\|PI42A_RAT Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha OS=Rattus norvegicus GN=Pip4k2a PE=1 SV=1	Back alignment and function description

>sp\|O70172\|PI42A_MOUSE Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha OS=Mus musculus GN=Pip4k2a PE=1 SV=1	Back alignment and function description

>sp\|P48426\|PI42A_HUMAN Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha OS=Homo sapiens GN=PIP4K2A PE=1 SV=2	Back alignment and function description

>sp\|O13010\|PI42A_PIG Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha OS=Sus scrofa GN=PIP4K2A PE=2 SV=1	Back alignment and function description

>sp\|Q6IQE1\|PI42C_DANRE Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma OS=Danio rerio GN=pip4k2c PE=2 SV=1	Back alignment and function description

>sp\|Q6GL14\|PI42C_XENTR Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma OS=Xenopus tropicalis GN=pip4k2c PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		302
322796358		434	hypothetical protein SINV_03124 [Solenop	1.0	0.695	0.735	1e-129
307169342		499	Phosphatidylinositol-5-phosphate 4-kinas	0.990	0.599	0.738	1e-129
328785105		430	PREDICTED: phosphatidylinositol-5-phosph	0.976	0.686	0.734	1e-128
307201517		434	Phosphatidylinositol-5-phosphate 4-kinas	0.996	0.693	0.738	1e-128
380022357		430	PREDICTED: LOW QUALITY PROTEIN: phosphat	0.976	0.686	0.734	1e-128
332027212		500	Phosphatidylinositol-5-phosphate 4-kinas	0.990	0.598	0.732	1e-128
340724656		430	PREDICTED: phosphatidylinositol-5-phosph	0.980	0.688	0.736	1e-128
383854599		430	PREDICTED: phosphatidylinositol-5-phosph	0.980	0.688	0.733	1e-127
328708398		418	PREDICTED: phosphatidylinositol-5-phosph	1.0	0.722	0.788	1e-125
328708402		407	PREDICTED: phosphatidylinositol-5-phosph	1.0	0.742	0.788	1e-125

>gi\|322796358\|gb\|EFZ18899.1\| hypothetical protein SINV_03124 [Solenopsis invicta]	Back alignment and taxonomy information

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 236/321 (73%), Positives = 263/321 (81%), Gaps = 19/321 (5%)

Query: 1   MSWSQPIAVESPGKSGAKFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLL 60
           M+ SQP+  +S GKSGAKFYQSYD+LFIIKTLTSEEVERMHSFLK YHPYIVERHGKTLL
Sbjct: 114 MTRSQPVLDDSSGKSGAKFYQSYDKLFIIKTLTSEEVERMHSFLKHYHPYIVERHGKTLL 173

Query: 61  PQYLGMYRLTVDGVEHYVVAMRNVFSNHLTTHKKFDLKGSTVDREASEKEKEKDLPTFKD 120
           PQYLGMYRLTVDGVEHYVVA+RNVFSNHLTTHKKFDLKGSTVDREAS+KEKEKDLPT+KD
Sbjct: 174 PQYLGMYRLTVDGVEHYVVAIRNVFSNHLTTHKKFDLKGSTVDREASDKEKEKDLPTYKD 233

Query: 121 NDFVQGGTKIVIGDEAKEKLLETLNADVEFLTNLHLMDYSLLVGIHDCARAEAEE----- 175
           NDFV+ G KI IG+EAK KL+ETL ADV+FLT LHLMDYSLL+G+HDCARAE E      
Sbjct: 234 NDFVKEGMKIYIGEEAKAKLIETLTADVDFLTRLHLMDYSLLLGLHDCARAEQESRERAE 293

Query: 176 ---------LANENNGGGG----GADDEDEEDSEGVGDRIPWGTTPPDSPH-TLNRETSL 221
                      +++  G G    G   +      GVG  +    TPP+SPH  L RETSL
Sbjct: 294 REDDEDNHEEEDDSESGSGLESRGPVTDRLYSWSGVGHAVTNMATPPESPHAALMRETSL 353

Query: 222 QYDGAIIPELDIYAIPSAENAPVKEIYFIALIDVLTHYGVKKQAAKAAKTLKHGANVDGI 281
           QY+ AIIPELDIYAIPS E AP KEIYF+A+IDVLTHYGV+KQAAKAAKT+K+GANVDGI
Sbjct: 354 QYEDAIIPELDIYAIPSKEGAPTKEIYFLAIIDVLTHYGVRKQAAKAAKTVKYGANVDGI 413

Query: 282 STCDPEQYGKRFIEFLSKAME 302
           STCDPEQYGKRFIEF+SKA+E
Sbjct: 414 STCDPEQYGKRFIEFMSKAIE 434

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi\|307169342\|gb\|EFN62063.1\| Phosphatidylinositol-5-phosphate 4-kinase type-2 alpha [Camponotus floridanus]	Back alignment and taxonomy information

>gi\|328785105\|ref\|XP_392797.3\| PREDICTED: phosphatidylinositol-5-phosphate 4-kinase type-2 alpha-like isoform 1 [Apis mellifera]	Back alignment and taxonomy information

>gi\|307201517\|gb\|EFN81280.1\| Phosphatidylinositol-5-phosphate 4-kinase type-2 beta [Harpegnathos saltator]	Back alignment and taxonomy information

>gi\|380022357\|ref\|XP_003695016.1\| PREDICTED: LOW QUALITY PROTEIN: phosphatidylinositol-5-phosphate 4-kinase type-2 alpha-like [Apis florea]	Back alignment and taxonomy information

>gi\|332027212\|gb\|EGI67301.1\| Phosphatidylinositol-5-phosphate 4-kinase type-2 beta [Acromyrmex echinatior]	Back alignment and taxonomy information

>gi\|340724656\|ref\|XP_003400697.1\| PREDICTED: phosphatidylinositol-5-phosphate 4-kinase type-2 alpha-like isoform 1 [Bombus terrestris] gi\|350398183\|ref\|XP_003485111.1\| PREDICTED: phosphatidylinositol-5-phosphate 4-kinase type-2 alpha-like [Bombus impatiens]	Back alignment and taxonomy information

>gi\|383854599\|ref\|XP_003702808.1\| PREDICTED: phosphatidylinositol-5-phosphate 4-kinase type-2 alpha-like [Megachile rotundata]	Back alignment and taxonomy information

>gi\|328708398\|ref\|XP_001943744.2\| PREDICTED: phosphatidylinositol-5-phosphate 4-kinase type-2 beta-like isoform 1 [Acyrthosiphon pisum]	Back alignment and taxonomy information

>gi\|328708402\|ref\|XP_003243679.1\| PREDICTED: phosphatidylinositol-5-phosphate 4-kinase type-2 beta-like isoform 3 [Acyrthosiphon pisum]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		302
FB\|FBgn0039924		404	CG17471 [Drosophila melanogast	0.546	0.408	0.757	7.9e-93
UNIPROTKB\|F1NKL5		358	PIP4K2A "Phosphatidylinositol	0.543	0.458	0.640	7.5e-76
UNIPROTKB\|Q5F356		405	PIP4K2A "Phosphatidylinositol	0.543	0.404	0.640	7.5e-76
MGI\|MGI:1298206		405	Pip4k2a "phosphatidylinositol-	0.543	0.404	0.634	2.5e-75
RGD\|621708		406	Pip4k2a "phosphatidylinositol-	0.543	0.403	0.634	2.5e-75
UNIPROTKB\|F1MHT2		416	PIP4K2B "Uncharacterized prote	0.543	0.394	0.646	3.2e-75
UNIPROTKB\|F1PGQ7		416	PIP4K2B "Uncharacterized prote	0.543	0.394	0.646	3.2e-75
MGI\|MGI:1934234		416	Pip4k2b "phosphatidylinositol-	0.543	0.394	0.646	3.2e-75
RGD\|621710		416	Pip4k2b "phosphatidylinositol-	0.543	0.394	0.646	3.2e-75
UNIPROTKB\|F1NLK4		373	PIP4K2B "Uncharacterized prote	0.543	0.439	0.640	4.1e-75

FB\|FBgn0039924 CG17471 [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

 Score = 690 (248.0 bits), Expect = 7.9e-93, Sum P(2) = 7.9e-93
 Identities = 125/165 (75%), Positives = 149/165 (90%)

Query:     4 SQPIAVESPGKSGAKFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQY 63
             SQPI ++S GKSGA+FYQSYD+ FIIK+LTSEE+ERMH+FLKQYHPY+VERHGKTLLPQY
Sbjct:   117 SQPIQIDSSGKSGAQFYQSYDKFFIIKSLTSEEIERMHAFLKQYHPYVVERHGKTLLPQY 176

Query:    64 LGMYRLTVDGVEHYVVAMRNVFSNHLTTHKKFDLKGSTVDREASEKEKEKDLPTFKDNDF 123
             LGMYR+TV+ V++Y V MRNVFS+HLT HKKFDLKGSTVDREASEKE EK+LPTFKDNDF
Sbjct:   177 LGMYRITVESVQYYFVVMRNVFSSHLTIHKKFDLKGSTVDREASEKELEKNLPTFKDNDF 236

Query:   124 VQGGTKIVIGDEAKEKLLETLNADVEFLTNLHLMDYSLLVGIHDC 168
             ++   K+ IG EAK+KL++TL+ DV+ LT LH+MDYSLLVG+HDC
Sbjct:   237 IKQKVKLDIGKEAKDKLMDTLSNDVDLLTKLHIMDYSLLVGVHDC 281

GO:0016308 "1-phosphatidylinositol-4-phosphate 5-kinase activity" evidence=ISS;NAS

GO:0016310 "phosphorylation" evidence=NAS

GO:0007155 "cell adhesion" evidence=IMP

GO:0008360 "regulation of cell shape" evidence=IMP

GO:0007015 "actin filament organization" evidence=IMP

GO:0046488 "phosphatidylinositol metabolic process" evidence=IEA

UNIPROTKB\|F1NKL5 PIP4K2A "Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5F356 PIP4K2A "Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

MGI\|MGI:1298206 Pip4k2a "phosphatidylinositol-5-phosphate 4-kinase, type II, alpha" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

RGD\|621708 Pip4k2a "phosphatidylinositol-5-phosphate 4-kinase, type II, alpha" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|F1MHT2 PIP4K2B "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|F1PGQ7 PIP4K2B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

MGI\|MGI:1934234 Pip4k2b "phosphatidylinositol-5-phosphate 4-kinase, type II, beta" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

RGD\|621710 Pip4k2b "phosphatidylinositol-5-phosphate 4-kinase, type II, beta" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NLK4 PIP4K2B "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O13010	PI42A_PIG	2, ., 7, ., 1, ., 1, 4, 9	0.5637	0.9437	0.7019	yes	N/A
O88377	PI42B_RAT	2, ., 7, ., 1, ., 1, 4, 9	0.5548	0.9768	0.7091	yes	N/A
P78356	PI42B_HUMAN	2, ., 7, ., 1, ., 1, 4, 9	0.5511	0.9701	0.7043	yes	N/A
Q80XI4	PI42B_MOUSE	2, ., 7, ., 1, ., 1, 4, 9	0.5511	0.9701	0.7043	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.1.68	LOW CONFIDENCE prediction!
3rd Layer	2.7.1	0.921

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Alignment Graph	Length	Definition	E-value
Query		302
pfam01504		255	pfam01504, PIP5K, Phosphatidylinositol-4-phosphate	2e-85
smart00330		342	smart00330, PIPKc, Phosphatidylinositol phosphate	1e-81
cd00139		313	cd00139, PIPKc, Phosphatidylinositol phosphate kin	3e-63
PLN03185		765	PLN03185, PLN03185, phosphatidylinositol phosphate	2e-29
COG5253		612	COG5253, MSS4, Phosphatidylinositol-4-phosphate 5-	4e-27
cd00139		313	cd00139, PIPKc, Phosphatidylinositol phosphate kin	7e-10

>gnl\|CDD\|216538 pfam01504, PIP5K, Phosphatidylinositol-4-phosphate 5-Kinase	Back alignment and domain information

 Score =  256 bits (656), Expect = 2e-85
 Identities = 98/293 (33%), Positives = 137/293 (46%), Gaps = 53/293 (18%)

Query: 11  SPGKSGAKFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLT 70
           S GKSG+ FY+S D  FIIKT+   EV+ +  FL  Y  + V+ +  TLLP++ G+YR+ 
Sbjct: 14  SGGKSGSFFYKSRDDRFIIKTIKKSEVKFLLKFLPAYFEH-VKENPNTLLPKFYGLYRVK 72

Query: 71  V--DGVEHYVVAMRNVFSNHLTTHKKFDLKGSTVDREASEKEKEKDLPTFKDNDFVQGGT 128
                 + Y V M N+F +    H+++DLKGSTV R  S KE        KD DF++ G 
Sbjct: 73  KKGGEKKIYFVVMENLFYSPRDIHRRYDLKGSTVGRSVSPKE---KEKVLKDLDFLEDGR 129

Query: 129 KIVIGDEAKEKLLETLNADVEFLTNLHLMDYSLLVGIHDCARAEAEELANENNGGGGGAD 188
            I +G E K+ LLE L  D EFL +L++MDYSLLVGIH     ++EE             
Sbjct: 130 PIFLGPEKKKLLLEQLKRDCEFLESLNIMDYSLLVGIHRVEDEDSEE------------- 176

Query: 189 DEDEEDSEGVGDRIPWGTTPPDSPHTLNRETSLQYDGAIIPELDIYAIPSAENAPVKEIY 248
                                                A            A + P  EIY
Sbjct: 177 ---------------------------------GAAEASGEFDLDEGGIRAGDDPENEIY 203

Query: 249 FIALIDVLTHYGVKKQAAKAAKTLKHGANVDGISTCDPEQYGKRFIEFLSKAM 301
           +I +ID+LT Y   K+     K+L +      IS   P++Y KRF++F+ K  
Sbjct: 204 YIGIIDILTPYTWDKKLEHFVKSLLYLDG-KTISIVPPKEYAKRFLKFIEKYF 255

This family contains a region from the common kinase core found in the type I phosphatidylinositol-4-phosphate 5-kinase (PIP5K) family as described in. The family consists of various type I, II and III PIP5K enzymes. PIP5K catalyzes the formation of phosphoinositol-4,5-bisphosphate via the phosphorylation of phosphatidylinositol-4-phosphate a precursor in the phosphinositide signaling pathway. Length = 255

>gnl\|CDD\|214623 smart00330, PIPKc, Phosphatidylinositol phosphate kinases	Back alignment and domain information

>gnl\|CDD\|238081 cd00139, PIPKc, Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate	Back alignment and domain information

>gnl\|CDD\|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional	Back alignment and domain information

>gnl\|CDD\|227578 COG5253, MSS4, Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]	Back alignment and domain information

>gnl\|CDD\|238081 cd00139, PIPKc, Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		302
KOG0229\|consensus		420		100.0
cd00139		313	PIPKc Phosphatidylinositol phosphate kinases (PIPK	100.0
smart00330		342	PIPKc Phosphatidylinositol phosphate kinases.	100.0
PF01504		252	PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase;	100.0
PLN03185		765	phosphatidylinositol phosphate kinase; Provisional	100.0
KOG0230\|consensus		1598		100.0
COG5253		612	MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Si	100.0

>KOG0229\|consensus	Back alignment and domain information

Probab=100.00  E-value=2.1e-79  Score=581.72  Aligned_cols=291  Identities=41%  Similarity=0.665  Sum_probs=228.3

Q ss_pred             CCCCCCCCC-CCCCCccceEEeecCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCC-eEEEE
Q psy11937          1 MSWSQPIAV-ESPGKSGAKFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDG-VEHYV   78 (302)
Q Consensus         1 l~r~~~~~~-~s~GKSGs~F~~T~D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~-~~~~f   78 (302)
                      ||+++|+.+ .+||||||+||+|+|.+||||||+++|.++|+++||.||+|+.++++.||||||||||+|+..+ .++||
T Consensus       126 lc~~~~l~e~sspGksGS~Fy~S~DdrFiIKTv~~~E~~~l~~mLp~Yy~~v~~~~~~TLl~kf~Gly~vk~~gg~k~yf  205 (420)
T KOG0229|consen  126 LCGNPPLRELSSPGKSGSFFYLSYDDRFIIKTVRKSEVKVLLKMLPGYYQHVVEQNNRTLLPKFFGLYRVKPDGGKKIYF  205 (420)
T ss_pred             HhcchhhhhccCCCCccceEEEecCceEEEEeccHHHHHHHHHHHHHHHHHHHccCCceeehhhceeEEEeeCCCceEEE
Confidence            588999988 6669999999999999999999999999999999999999999877779999999999999954 99999


Q ss_pred             EEEeeccCCCCceeeeEEeeCCccccccCcccccCCCCccccccccCCCceEEeChHHHHHHHHHHhccccccccccccc
Q psy11937         79 VAMRNVFSNHLTTHKKFDLKGSTVDREASEKEKEKDLPTFKDNDFVQGGTKIVIGDEAKEKLLETLNADVEFLTNLHLMD  158 (302)
Q Consensus        79 vVM~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~vlkD~df~~~~~~i~l~~~~~~~l~~qL~~D~~FL~~~~IMD  158 (302)
                      |||+|+|+++..||++||||||+++|.++.+++.++.|||||+||++...+++|+++++++|++||++||+||++++|||
T Consensus       206 vVM~Nlf~~~~~iH~kyDLKGSt~~R~askke~~k~~pTlKDlDf~~~~~~~~l~~~~~~~l~~ql~~Dce~Le~~~IMD  285 (420)
T KOG0229|consen  206 VVMNNLFPSRLKVHRKYDLKGSTVGREASKKEKIKELPTLKDLDFLNEGQKLYLGKEAKKALLKQLKRDCEFLESLKIMD  285 (420)
T ss_pred             EEecccCCCccceeEEeecCCCcccccccchhhccCCCccccchhhccCceEecCHHHHHHHHHHHHHHHHHHHHhcchh
Confidence            99999999999999999999999999999889999999999999999888999999999999999999999999999999


Q ss_pred             cceeeEEEechhhHHHHHhhcCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCcc-cccccccCCCCccCCCCceeccc
Q psy11937        159 YSLLVGIHDCARAEAEELANENNGGGGGADDEDEEDSEGVGDRIPWGTTPPDSPHT-LNRETSLQYDGAIIPELDIYAIP  237 (302)
Q Consensus       159 YSLLvGih~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~  237 (302)
                      ||||||||++.++..+..+.+....    .++...+.+..++..  ..+++..+.. .+...|...+ ...+.... .++
T Consensus       286 YSLLvGiH~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~--~~~~~~~~~i~~g~~~p~~~~-~~~~~~~~-~~~  357 (420)
T KOG0229|consen  286 YSLLVGIHDRDRGQAEKEELEPQED----ESEREQRLSSASPED--VLTSTASPSIQLGANMPARAG-EERVDRME-YAP  357 (420)
T ss_pred             hhheeeeeeccccccchhhcCCCCC----ccccccccccccccc--cCCCCCcccccCCCCCCCccc-cccccccc-ccc
Confidence            9999999999875443322111000    000000000000000  0111111110 1111122221 11111112 222


Q ss_pred             CCCCCCCceEEEEEEeeeccccchhHHHHHHHHHhccCCCCCCccccChhhHHHHHHHHHHHhc
Q psy11937        238 SAENAPVKEIYFIALIDVLTHYGVKKQAAKAAKTLKHGANVDGISTCDPEQYGKRFIEFLSKAM  301 (302)
Q Consensus       238 ~~~~~~~~~vyylGIIDiLq~Y~~~KklE~~~Ks~~~~~~~~~iS~v~P~~Y~~RF~~f~~~if  301 (302)
                      .....+.+.|||+|||||||.|++.||+||+||++.+++  +.||||+|..|++||++||.++|
T Consensus       358 ~~~~~~~~~v~y~GIIDILq~Y~~~KK~EH~~Ksl~~d~--~tIS~v~P~~Ys~RF~dFi~~~~  419 (420)
T KOG0229|consen  358 AQNSGGYDVVLYIGIIDILQDYDIKKKLEHAYKSLQHDP--DTISAVDPKFYAKRFLDFISNIF  419 (420)
T ss_pred             ccccCcceEEEEEEeehhhhhcchhhHHHHHHhhhccCC--ceeeccCHHHHHHHHHHHHHhhc
Confidence            223346789999999999999999999999999999987  47999999999999999999987

>cd00139 PIPKc Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate	Back alignment and domain information

>smart00330 PIPKc Phosphatidylinositol phosphate kinases	Back alignment and domain information

>PF01504 PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase; InterPro: IPR002498 This entry represents a conserved region from the common kinase core found in the type I phosphatidylinositol-4-phosphate 5-kinase (PIP5K) family as described in []	Back alignment and domain information

>PLN03185 phosphatidylinositol phosphate kinase; Provisional	Back alignment and domain information

>KOG0230\|consensus	Back alignment and domain information

>COG5253 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		302
1bo1_A		416	Phosphatidylinositol Phosphate Kinase Type Ii Beta		6e-77
2ybx_A		394	Crystal Structure Of Human Phosphatidylinositol-5-P		2e-73
2gk9_A		392	Human Phosphatidylinositol-4-Phosphate 5-Kinase, Ty		5e-59

>pdb|1BO1|A Chain A, Phosphatidylinositol Phosphate Kinase Type Ii Beta Length = 416

Back alignment and structure

Iteration: 1

Score = 283 bits (725), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 150/301 (49%), Positives = 191/301 (63%), Gaps = 6/301 (1%) Query: 1 MSWSQPIAVESPGKSGAKFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLL 60 ++ S PI +S G+ G +F +YDR F+IKT++SE+V MH+ LK+YH +IVE HG TLL Sbjct: 121 VTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLL 180 Query: 61 PQYLGMYRLTVDGVEHYVVAMRNVFSNHLTTHKKFDLKGSTVDREASEKEKEKDLPTFKD 120 PQ+LGMYRLTVDGVE Y+V RNVFS+ LT H+K+DLKGSTV REAS+KEK KDLPTFKD Sbjct: 181 PQFLGMYRLTVDGVETYMVVTRNVFSHRLTVHRKYDLKGSTVAREASDKEKAKDLPTFKD 240 Query: 121 NDFVQGGTKIVIGDEAKEKLLETLNADVEFLTNLHLMDYSLLVGIHDCXXXXXXXXXXXX 180 NDF+ G K+ +G+E+K+ LE L DVEFL L +MDYSLLVGIHD Sbjct: 241 NDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAEQEEMEVEE 300 Query: 181 XXXXXXXXXXXXXXXXXXXXRIPWGTTPPDSPHTLNRETSLQYDGAIIPELDIYAIPSAE 240 +G TPPDSP L G P +D+YA+ S E Sbjct: 301 RAEDEECENDGVGGNLL----CSYG-TPPDSPGNLLSFPRFFGPGEFDPSVDVYAMKSHE 355 Query: 241 NAPVKEIYFIALIDVLTHYGVXXXXXXXXXTLKHGANVDGISTCDPEQYGKRFIEFLSKA 300 ++P KE+YF+A+ID+LT Y T+KHGA + IST +PEQY KRF EF+S Sbjct: 356 SSPKKEVYFMAIIDILTPYDTKKKAAHAAKTVKHGAGAE-ISTVNPEQYSKRFNEFMSNI 414 Query: 301 M 301 + Sbjct: 415 L 415

PyMOL of 1bo1

>pdb|2YBX|A Chain A, Crystal Structure Of Human Phosphatidylinositol-5-Phosphate 4-Kinase Type-2 Alpha Length = 394

Back alignment and structure

>pdb|2GK9|A Chain A, Human Phosphatidylinositol-4-Phosphate 5-Kinase, Type Ii, Gamma Length = 392

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		302
2ybx_A		394	Phosphatidylinositol-5-phosphate 4-kinase type-2;	8e-79
2gk9_A		392	Phosphatidylinositol-4-phosphate 5-kinase, type II	3e-74
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A Length = 394	Back alignment and structure

 Score =  244 bits (622), Expect = 8e-79
 Identities = 163/301 (54%), Positives = 204/301 (67%), Gaps = 11/301 (3%)

Query: 1   MSWSQPIAVESPGKSGAKFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLL 60
           ++ S P+  +S  +SGA+F+ SYD+ +IIKT+TSE+V  MH+ LK+YH YIVE HG TLL
Sbjct: 105 LTRSAPLPNDSQARSGARFHTSYDKRYIIKTITSEDVAEMHNILKKYHQYIVECHGITLL 164

Query: 61  PQYLGMYRLTVDGVEHYVVAMRNVFSNHLTTHKKFDLKGSTVDREASEKEKEKDLPTFKD 120
           PQ+LGMYRL VDGVE YV+  RNVFS+ L+ ++K+DLKGSTV REAS+KEK K+LPT KD
Sbjct: 165 PQFLGMYRLNVDGVEIYVIVTRNVFSHRLSVYRKYDLKGSTVAREASDKEKAKELPTLKD 224

Query: 121 NDFVQGGTKIVIGDEAKEKLLETLNADVEFLTNLHLMDYSLLVGIHDCARAEAEELANEN 180
           NDF+  G KI I D  K+  LE L  DVEFL  L LMDYSLLVGIHD  RAE EE+  E 
Sbjct: 225 NDFINEGQKIYIDDNNKKVFLEKLKKDVEFLAQLKLMDYSLLVGIHDVERAEQEEVECEE 284

Query: 181 NGGGGGADDEDEEDSEGVGDRIPWGTTPPDSPHTLNRETSLQYDGAIIPELDIYAIPSAE 240
           N G          + EG  D      TPPDSP      +     G   P +D+Y I   E
Sbjct: 285 NDG----------EEEGESDGTHPVGTPPDSPGNTLNSSPPLAPGEFDPNIDVYGIKCHE 334

Query: 241 NAPVKEIYFIALIDVLTHYGVKKQAAKAAKTLKHGANVDGISTCDPEQYGKRFIEFLSKA 300
           N+P KE+YF+A+I +LTHY  KK+AA AAKT+KHGA    IST +PEQY KRF++F+   
Sbjct: 335 NSPRKEVYFMAIIXILTHYDAKKKAAHAAKTVKHGAG-AEISTVNPEQYSKRFLDFIGHI 393

Query: 301 M 301
           +
Sbjct: 394 L 394

PyMOL of 2ybx

>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens} Length = 392	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		302
2ybx_A		394	Phosphatidylinositol-5-phosphate 4-kinase type-2;	100.0
2gk9_A		392	Phosphatidylinositol-4-phosphate 5-kinase, type II	100.0
2aqx_A		289	Predicted: inositol 1,4,5-trisphosphate 3-kinase;	93.75
1w2f_A		276	Inositol-trisphosphate 3-kinase A; inositol phosph	91.05
2iew_A		363	Inositol polyphosphate multikinase; ATP-grAsp fold	90.76
2a98_A		259	Inositol 1,4,5-trisphosphate 3-kinase C; structura	88.35

>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A	Back alignment and structure

Probab=100.00  E-value=1e-80  Score=599.87  Aligned_cols=289  Identities=57%  Similarity=0.928  Sum_probs=213.3

Q ss_pred             CCCCCCCCCCCCCCccceEEeecCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEE
Q psy11937          1 MSWSQPIAVESPGKSGAKFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVA   80 (302)
Q Consensus         1 l~r~~~~~~~s~GKSGs~F~~T~D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvV   80 (302)
                      |+||.||...|+|||||+||+|.|+|||||||+++|+++|+++||+||+||.++||+|||+||||+|+|++.+.+.||||
T Consensus       105 l~~~~~~~~~s~GKSGs~F~~T~D~rfiIKti~~~E~~~l~~~lp~Y~~~~~~~~~~TLL~k~~Gly~v~~~~~~~~fvV  184 (394)
T 2ybx_A          105 LTRSAPLPNDSQARSGARFHTSYDKRYIIKTITSEDVAEMHNILKKYHQYIVECHGITLLPQFLGMYRLNVDGVEIYVIV  184 (394)
T ss_dssp             HHSSCCEECC-----CCCEEECTTSSEEEEEECHHHHHHHHHHHHHHHHHHHHTTTCCSSCCEEEEEEEEETTEEEEEEE
T ss_pred             hcCCCccccCCCCCccCEEEEeCCCcEEEEeeCHHHHHHHHHHHHHHHHHHHhcCCCcChhhhcEEEEEEECCeEEEEEE
Confidence            57899986699999999999999999999999999999999999999999977789999999999999999999999999


Q ss_pred             EeeccCCCCceeeeEEeeCCccccccCcccccCCCCccccccccCCCceEEeChHHHHHHHHHHhccccccccccccccc
Q psy11937         81 MRNVFSNHLTTHKKFDLKGSTVDREASEKEKEKDLPTFKDNDFVQGGTKIVIGDEAKEKLLETLNADVEFLTNLHLMDYS  160 (302)
Q Consensus        81 M~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~vlkD~df~~~~~~i~l~~~~~~~l~~qL~~D~~FL~~~~IMDYS  160 (302)
                      |+|+|+++..||++||||||+++|.+..+++.++.+||||+||++.+.+|+|+++.++.|++||++||+||+++||||||
T Consensus       185 M~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~LkD~df~~~~~~i~l~~~~k~~l~~qL~~D~~FL~~~~iMDYS  264 (394)
T 2ybx_A          185 TRNVFSHRLSVYRKYDLKGSTVAREASDKEKAKELPTLKDNDFINEGQKIYIDDNNKKVFLEKLKKDVEFLAQLKLMDYS  264 (394)
T ss_dssp             EECSSCSSSCCSEEEEECCSSSCCCCCHHHHTSSSCEECHHHHHHTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTEESCE
T ss_pred             EecCCCCCcceeeeeeecccccCCccCccccccCcceecccchHhcCCeEEECHHHHHHHHHHHHHHHHHHHHCCCccce
Confidence            99999988889999999999999999888877778999999999888899999999999999999999999999999999


Q ss_pred             eeeEEEechhhHHHHHhhcCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCcc-cccccccCCCCccCCCCceecccCC
Q psy11937        161 LLVGIHDCARAEAEELANENNGGGGGADDEDEEDSEGVGDRIPWGTTPPDSPHT-LNRETSLQYDGAIIPELDIYAIPSA  239 (302)
Q Consensus       161 LLvGih~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~  239 (302)
                      ||||||..+++.++..+...+.      .+.+....+.  ...  .++|+++.+ +.+...+.++ .+++..+.+++.+.
T Consensus       265 LLvGIh~~~~~~~~~~~~~~~~------~~~~~~~~~~--~~~--~t~~~~~~~~~~~~~~~~~~-~~~~~~d~~~i~~~  333 (394)
T 2ybx_A          265 LLVGIHDVERAEQEEVECEEND------GEEEGESDGT--HPV--GTPPDSPGNTLNSSPPLAPG-EFDPNIDVYGIKCH  333 (394)
T ss_dssp             EEEEEEEHHHHHHHHHCC------------------------------------------CCCTT-CCCTTTSTTEEECC
T ss_pred             eEEEEecccccchhhccccccc------cccccccccc--ccc--CCCccccccccccccccccc-cccccccccccccc
Confidence            9999999877655443111000      0000000010  000  344544422 2333333344 56666778888877


Q ss_pred             CCCCCceEEEEEEeeeccccchhHHHHHHHHHhccCCCCCCccccChhhHHHHHHHHHHHhc
Q psy11937        240 ENAPVKEIYFIALIDVLTHYGVKKQAAKAAKTLKHGANVDGISTCDPEQYGKRFIEFLSKAM  301 (302)
Q Consensus       240 ~~~~~~~vyylGIIDiLq~Y~~~KklE~~~Ks~~~~~~~~~iS~v~P~~Y~~RF~~f~~~if  301 (302)
                      ++.+.+++||||||||||+|||+||+||++|+++++++.+ ||||+|+.|++||++||+++|
T Consensus       334 ~~~~~~~iyyiGIIDiLq~Y~~~KklE~~~Ks~~~~~~~~-iS~V~P~~Y~~RF~~fm~~if  394 (394)
T 2ybx_A          334 ENSPRKEVYFMAIIXILTHYDAKKKAAHAAKTVKHGAGAE-ISTVNPEQYSKRFLDFIGHIL  394 (394)
T ss_dssp             TTCSSCEEEEEEEECCCEESCC--------------------CCCCHHHHHHHHHHHHHHHC
T ss_pred             cCCCCceEEEEEEEEeeecCChhHHHHHHHHHhccCCCCC-CceECHHHHHHHHHHHHHHhC
Confidence            7788889999999999999999999999999998875444 999999999999999999987

PyMOL of 2ybx

>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens}	Back alignment and structure

>2aqx_A Predicted: inositol 1,4,5-trisphosphate 3-kinase; IP3K, ITPKB, IP3-3K, IP3-3KB, IP3, calmodu binding, transferase; HET: ATP; 2.50A {Mus musculus}	Back alignment and structure

>1w2f_A Inositol-trisphosphate 3-kinase A; inositol phosphate kinase, transferase, calmodulin-binding; 1.8A {Homo sapiens} SCOP: d.143.1.3 PDB: 1tzd_A* 1w2d_A* 1w2c_A*	Back alignment and structure

>2iew_A Inositol polyphosphate multikinase; ATP-grAsp fold related, transferase; 2.00A {Saccharomyces cerevisiae} PDB: 2if8_A*	Back alignment and structure

>2a98_A Inositol 1,4,5-trisphosphate 3-kinase C; structural genomics, structural genomics consortium, SGC, transferase; HET: I3P; 2.60A {Homo sapiens}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		302
d1bo1a_		383	d.143.1.2 (A:) Phosphatidylinositol phosphate kina	8e-98

>d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} Length = 383	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: SAICAR synthase-like
superfamily: SAICAR synthase-like
family: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta
domain: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  291 bits (745), Expect = 8e-98
 Identities = 167/296 (56%), Positives = 211/296 (71%), Gaps = 6/296 (2%)

Query: 4   SQPIAVESPGKSGAKFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQY 63
           S PI  +S G+ G +F  +YDR F+IKT++SE+V  MH+ LK+YH +IVE HG TLLPQ+
Sbjct: 91  SAPINSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQF 150

Query: 64  LGMYRLTVDGVEHYVVAMRNVFSNHLTTHKKFDLKGSTVDREASEKEKEKDLPTFKDNDF 123
           LGMYRLTVDGVE Y+V  RNVFS+ LT H+K+DLKGSTV REAS+KEK KDLPTFKDNDF
Sbjct: 151 LGMYRLTVDGVETYMVVTRNVFSHRLTVHRKYDLKGSTVAREASDKEKAKDLPTFKDNDF 210

Query: 124 VQGGTKIVIGDEAKEKLLETLNADVEFLTNLHLMDYSLLVGIHDCARAEAEELANENNGG 183
           +  G K+ +G+E+K+  LE L  DVEFL  L +MDYSLLVGIHD  RAE EE+  E    
Sbjct: 211 LNEGQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAEQEEMEVEER-- 268

Query: 184 GGGADDEDEEDSEGVGDRIPWGTTPPDSPHTLNRETSLQYDGAIIPELDIYAIPSAENAP 243
              A+DE+ E+    G+ +    TPPDSP  L         G   P +D+YA+ S E++P
Sbjct: 269 ---AEDEECENDGVGGNLLCSYGTPPDSPGNLLSFPRFFGPGEFDPSVDVYAMKSHESSP 325

Query: 244 VKEIYFIALIDVLTHYGVKKQAAKAAKTLKHGANVDGISTCDPEQYGKRFIEFLSK 299
            KE+YF+A+ID+LT Y  KK+AA AAKT+KHGA  + IST +PEQY KRF EF+S 
Sbjct: 326 KKEVYFMAIIDILTPYDTKKKAAHAAKTVKHGAGAE-ISTVNPEQYSKRFNEFMSN 380

PyMOL of d1bo1a_

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		302
d1bo1a_		383	Phosphatidylinositol phosphate kinase IIbeta, PIPK	100.0
d1w2fa_		276	Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A {H	89.99

>d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: SAICAR synthase-like
superfamily: SAICAR synthase-like
family: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta
domain: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-81  Score=602.34  Aligned_cols=295  Identities=56%  Similarity=0.891  Sum_probs=212.9

Q ss_pred             CCCCCCCCCCCCCCccceEEeecCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEE
Q psy11937          1 MSWSQPIAVESPGKSGAKFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVA   80 (302)
Q Consensus         1 l~r~~~~~~~s~GKSGs~F~~T~D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvV   80 (302)
                      |+++.+|.+.|+|||||+||+|+|++||||||+++|+++|+++||+||+||.++||+|||+||||+|+|++.+.+.||||
T Consensus        88 l~~~~~~~~~s~GkSGs~F~~t~D~rfiiKti~~~E~~~l~~~l~~Y~~h~~~~n~~TLL~k~~Gly~i~~~~~~~~fvV  167 (383)
T d1bo1a_          88 VTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVV  167 (383)
T ss_dssp             HHSSCCEECCCC----CCEEECTTSSEEEECCCHHHHHHHHHHHHHHHHHHHTTTTCCSSCCEEEEEEEEETTEEEEEEE
T ss_pred             hCCCccccccccCCcCCeEEEecCCcEEEEEeCHHHHHHHHHHHHHHHHHHHhcCCCcCHHhhheeeEEEeCCceEEEEE
Confidence            57899998789999999999999999999999999999999999999999987789999999999999999999999999


Q ss_pred             EeeccCCCCceeeeEEeeCCccccccCcccccCCCCccccccccCCCceEEeChHHHHHHHHHHhccccccccccccccc
Q psy11937         81 MRNVFSNHLTTHKKFDLKGSTVDREASEKEKEKDLPTFKDNDFVQGGTKIVIGDEAKEKLLETLNADVEFLTNLHLMDYS  160 (302)
Q Consensus        81 M~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~vlkD~df~~~~~~i~l~~~~~~~l~~qL~~D~~FL~~~~IMDYS  160 (302)
                      |+|+|+++..||++||||||+++|.+.++++.++.+||||+||++...+|+|+++.++.|++||++||+||+++||||||
T Consensus       168 M~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~lKD~df~~~~~~i~l~~~~k~~l~~ql~~D~~fL~~~~imDYS  247 (383)
T d1bo1a_         168 TRNVFSHRLTVHRKYDLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYS  247 (383)
T ss_dssp             EECSSCSSSCCSEEEEECCCSSSSCSCSGGGSSSCCEECHHHHHHTTCCCCCCSSHHHHHHHHHHHHHHHHHHHTCCSCC
T ss_pred             EeccccCCcccceeEeccCcccccCcCcccccccchhhhhHHHHhccCCeeeCHHHHHHHHHHHHHHHHHHHHCCcCcce
Confidence            99999998899999999999999999988888889999999999888899999999999999999999999999999999


Q ss_pred             eeeEEEechhhHHHHHhhcCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCcccccc-cccCCCCccCCCCceecccCC
Q psy11937        161 LLVGIHDCARAEAEELANENNGGGGGADDEDEEDSEGVGDRIPWGTTPPDSPHTLNRE-TSLQYDGAIIPELDIYAIPSA  239 (302)
Q Consensus       161 LLvGih~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~  239 (302)
                      ||||||+++++.++.......+.     ..................++|+++..+... ....++ .+.+..+.+++.+.
T Consensus       248 LLvGIh~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  321 (383)
T d1bo1a_         248 LLVGIHDVDRAEQEEMEVEERAE-----DEECENDGVGGNLLCSYGTPPDSPGNLLSFPRFFGPG-EFDPSVDVYAMKSH  321 (383)
T ss_dssp             EEEEEEEHHHHHHHHHHHHHHTT-----TTC------------------------------------CCSCCTTTSTTEE
T ss_pred             eeEeeeccchhhhhhhhcccccc-----cccccccccccccccccCCCCCCcchhhccccccccc-ccCCCccccccccc
Confidence            99999998877655432111100     000000000000001112333332221111 111122 45555666677766


Q ss_pred             CCCCCceEEEEEEeeeccccchhHHHHHHHHHhccCCCCCCccccChhhHHHHHHHHHHHhcC
Q psy11937        240 ENAPVKEIYFIALIDVLTHYGVKKQAAKAAKTLKHGANVDGISTCDPEQYGKRFIEFLSKAME  302 (302)
Q Consensus       240 ~~~~~~~vyylGIIDiLq~Y~~~KklE~~~Ks~~~~~~~~~iS~v~P~~Y~~RF~~f~~~if~  302 (302)
                      ++.+.++|||||||||||+||++||+||+||++.++.+. +||||+|+.|++||++||++||.
T Consensus       322 ~~~~~~~vyyiGIIDiLq~Y~~~KklE~~~Ksl~~~~g~-~IS~v~P~~Ya~RF~~Fi~~I~~  383 (383)
T d1bo1a_         322 ESSPKKEVYFMAIIDILTPYDTKKKAAHAAKTVKHGAGA-EISTVNPEQYSKRFNEFMSNILT  383 (383)
T ss_dssp             ECSSTTEEEEEEECCSCC------------------CCC-SSSCCCHHHHHHHHHHHHHHHCC
T ss_pred             CCCCCeEEEEEEEEEecCCCcHHHHHHHHHHHhccCCCC-CcccCCHHHHHHHHHHHHHHhcC
Confidence            777889999999999999999999999999999987543 49999999999999999999984

PyMOL of d1bo1a_

>d1w2fa_ d.143.1.3 (A:) Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure