Psyllid ID: psy12151

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------53
MEKINLTTTDTTDRTKWRHYKLLNHIVTSRAYLPKHRISVNHHSFRLSSVKMQTDPKAEEAFKRLPLPVKGLCDRYKYSVIQLKNGLTALLVSDVENLITLDENVTADDKMSMEQESEESGNESGDETASSVDSQGMEVDEFEEADRSKQEKKSDEKLAALSLTIGVGSFCDGHIPGLAHFLEHMVFMGSEKYPEENDFDAFLSTRGGSSNASTEYETTTFYFDVPEPHLKKSMDIFSNFFISPLLKRDSIASEMDIVDSEFQSSILNDTCRLEQLLATACTKENPAGKFVWGNLETLKNTVDENELYAALRNLQKTHYVANHMTLALQARLDLPTLEAWVVEHFSGIPSNESPKKTFSVETPFELDRWNRFYTVKPVDDVNVLYMTWYTPPVQQLYKTKPLDVLSWFIGHEGPGSIMSYLRKKFLAIEIEAGYHESGFEYNHLYTLFQINVTLTDQGVDQIQHIMDIIFQYLRLLSQSPISSEMYAEISNIHHIGFNYHSTKSSVDYVEELSLHMQYFPSQEYITGT
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccEEEEEEcccccccccccccHHHHHHHHcccccccccccHHHHHHHHccccccEEEccccEEEEEEEccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccccHHHHccccccHHHHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHHHccccccccccccccccccccccccccEEEEEEEcccccEEEEEEEccccccHHcccHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccccccccccEEEEEEEEEcccccHHcHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccccccEEEcc
ccEEEEEccccccccccHHHHHHHHEEccHHccccccccccccEEEEEEEEccccccHcEEEEEccccccccccccEEEEEEcccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccHHHEEEEEcccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHccccccccccccccEEEEEccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccccccccHHHHccccccccHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHHHHccccccccccccccccccccHHHHcEEEEEEEccccEEEEEEEccccHHHHHccccHHHHHHHHccccccHHHHHHHHcccHHHEEcccccccccccccEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccHHHEEccc
mekinltttdttdrtkWRHYKLLNHIVTSraylpkhrisvnhhsfrlssvkmqtdpkaeeafkrlplpvkglcdrYKYSVIQLKNGLTALLVSDVEnlitldenvtaddkmsmeqeseesgnesgdetassvdsqgmevdefeeadrskqekkSDEKLAALSLTIGvgsfcdghipGLAHFLEHMVfmgsekypeendfdaflstrggssnasteyetttfyfdvpephlkksmDIFSnffispllkrdsiasemdIVDSEFQSSILNDTCRLEQLLATActkenpagkfvwgnletlkntVDENELYAALRNLQKTHYVANHMTLALQARLDLPTLEAWVVEHfsgipsnespkktfsvetpfeldrwnrfytvkpvddvNVLYMtwytppvqqlyktkpldvlswfighegpgsiMSYLRKKFLAIEIEAgyhesgfeynHLYTLFQINVTLTDQGVDQIQHIMDIIFQYLRLlsqspissemYAEISNIHHigfnyhstkssVDYVEELSLHmqyfpsqeyitgt
mekinltttdttdrtkwrhyKLLNHIVTSRAYLPKHRISVNHHSFRLSSVKMQTDPKAeeafkrlplpvkgLCDRYKYSVIQLKNGLTALLVSDVENLITLDENVTADDKMSMEQEseesgnesgdetassvdsqgmEVDEFeeadrskqekksdEKLAALSLTIGVGSFCDGHIPGLAHFLEHMVFMGSEKYPEENDFDAFLSTRggssnasteyETTTFYFDVPEPHLKKSMDIFSNFFISPLLKRDSIASEMDIVDSEFQSSILNDTCRLEQLLATACtkenpagkfvwgnlETLKNTVDENELYAALRNLQKTHYVANHMTLALQARLDLPTLEAWVVEHFsgipsnespkktFSVETPFeldrwnrfytvkPVDDVNVLYMTWYTPPVQQLYKTKPLDVLSWFIGHEGPGSIMSYLRKKFLAIEIEAGYHESGFEYNHLYTLFQINVTLTDQGVDQIQHIMDIIFQYLRLLSQSPISSEMYAEISNIHHIGFNYHSTKSSVDYVEELSLHMqyfpsqeyitgt
MEKINLtttdttdrtKWRHYKLLNHIVTSRAYLPKHRISVNHHSFRLSSVKMQTDPKAEEAFKRLPLPVKGLCDRYKYSVIQLKNGLTALLVSDVENLITLDENVTADDKmsmeqeseesgnesgdeTASSVDSQGMEVDEFEEADRSKQEKKSDEKLAALSLTIGVGSFCDGHIPGLAHFLEHMVFMGSEKYPEENDFDAFLSTRGGSSNASTEYETTTFYFDVPEPHLKKSMDIFSNFFISPLLKRDSIASEMDIVDSEFQSSILNDTCRLEQLLATACTKENPAGKFVWGNLETLKNTVDENELYAALRNLQKTHYVANHMTLALQARLDLPTLEAWVVEHFSGIPSNESPKKTFSVETPFELDRWNRFYTVKPVDDVNVLYMTWYTPPVQQLYKTKPLDVLSWFIGHEGPGSIMSYLRKKFLAIEIEAGYHESGFEYNHLYTLFQINVTLTDQGVDQIQHIMDIIFQYLRLLSQSPISSEMYAEISNIHHIGFNYHSTKSSVDYVEELSLHMQYFPSQEYITGT
****************WRHYKLLNHIVTSRAYLPKHRISVNHHSFRL*************AFKRLPLPVKGLCDRYKYSVIQLKNGLTALLVSDVENLITLDE*******************************************************AALSLTIGVGSFCDGHIPGLAHFLEHMVFMGSEKY*****F*AF*************YETTTFYFDVPEPHLKKSMDIFSNFFISPLLK**********************TCRLEQLLATACTKENPAGKFVWGNLETLKNTVDENELYAALRNLQKTHYVANHMTLALQARLDLPTLEAWVVEHFSGI*********FSVETPFELDRWNRFYTVKPVDDVNVLYMTWYTPPVQQLYKTKPLDVLSWFIGHEGPGSIMSYLRKKFLAIEIEAGYHESGFEYNHLYTLFQINVTLTDQGVDQIQHIMDIIFQYLRLLSQSPISSEMYAEISNIHHIGFNYHSTKSSVDYVEELSLHMQYFP********
*****LT*TDTTDRTKWRHYKLLNHIVTSRAYLPKHRISVNH******************************CDRYKYSVIQLKNGLTALLVSDVEN************************************************DRSKQEKKSDEKLAALSLTIGVGSFCDGHIPGLAHFLEHMVFMGSEKYPEENDFDAFLSTRGGSSNASTEYETTTFYFDVPEPHLKKSMDIFSNFFISPLLKRDSIASEMDIVDSEFQSSILNDTCRLEQLLATACTKENPAGKFVWGNLETLKNTVDENELYAALRNLQKTHYVANHMTLALQARLDLPTLEAWVVEHFSGIPSNESPKKTFSVETPFELDRWNRFYTVKPVDDVNVLYMTWYTPPVQQLYKTKPLDVLSWFIGHEGPGSIMSYLRKKFLAIEIEAGYHESGFEYNHLYTLFQINVTLTDQGVDQIQHIMDIIFQYLRLLSQSPISSEMYAEISNIHHIGFNYHSTKSSVDYVEELSLHMQYFPSQEYITGT
MEKINLTTTDTTDRTKWRHYKLLNHIVTSRAYLPKHRISVNHHSFRLSSVKMQTDPKAEEAFKRLPLPVKGLCDRYKYSVIQLKNGLTALLVSDVENLITLDENVTAD************************************************KLAALSLTIGVGSFCDGHIPGLAHFLEHMVFMGSEKYPEENDFDAFLSTRGGSSNASTEYETTTFYFDVPEPHLKKSMDIFSNFFISPLLKRDSIASEMDIVDSEFQSSILNDTCRLEQLLATACTKENPAGKFVWGNLETLKNTVDENELYAALRNLQKTHYVANHMTLALQARLDLPTLEAWVVEHFSGIPSNESPKKTFSVETPFELDRWNRFYTVKPVDDVNVLYMTWYTPPVQQLYKTKPLDVLSWFIGHEGPGSIMSYLRKKFLAIEIEAGYHESGFEYNHLYTLFQINVTLTDQGVDQIQHIMDIIFQYLRLLSQSPISSEMYAEISNIHHIGFNYHSTKSSVDYVEELSLHMQYFPSQEYITGT
*EKINLTTTDTTDRTKWRHYKLLNHIVTSRAYLPKHRISVNHHSFRLSSVKMQTDPKAEEAFKRLPLPVKGLCDRYKYSVIQLKNGLTALLVSDV***********************************************EEADRSKQEKKSDEKLAALSLTIGVGSFCDGHIPGLAHFLEHMVFMGSEKYPEENDFDAFLSTRGGSSNASTEYETTTFYFDVPEPHLKKSMDIFSNFFISPLLKRDSIASEMDIVDSEFQSSILNDTCRLEQLLATACTKENPAGKFVWGNLETLKNTVDENELYAALRNLQKTHYVANHMTLALQARLDLPTLEAWVVEHFSGIPSNESPKKTFSVETPFELDRWNRFYTVKPVDDVNVLYMTWYTPPVQQLYKTKPLDVLSWFIGHEGPGSIMSYLRKKFLAIEIEAGYHESGFEYNHLYTLFQINVTLTDQGVDQIQHIMDIIFQYLRLLSQSPISSEMYAEISNIHHIGFNYHSTKSSVDYVEELSLHMQYFPSQEYITG*
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MEKINLTTTDTTDRTKWRHYKLLNHIVTSRAYLPKHRISVNHHSFRLSSVKMQTDPKAEEAFKRLPLPVKGLCDRYKYSVIQLKNGLTALLVSDVENLITLDENVTADDKMSMEQESEESGNESGDETASSVDSQGMEVDEFEEADRSKQEKKSDEKLAALSLTIGVGSFCDGHIPGLAHFLEHMVFMGSEKYPEENDFDAFLSTRGGSSNASTEYETTTFYFDVPEPHLKKSMDIFSNFFISPLLKRDSIASEMDIVDSEFQSSILNDTCRLEQLLATACTKENPAGKFVWGNLETLKNTVDENELYAALRNLQKTHYVANHMTLALQARLDLPTLEAWVVEHFSGIPSNESPKKTFSVETPFELDRWNRFYTVKPVDDVNVLYMTWYTPPVQQLYKTKPLDVLSWFIGHEGPGSIMSYLRKKFLAIEIEAGYHESGFEYNHLYTLFQINVTLTDQGVDQIQHIMDIIFQYLRLLSQSPISSEMYAEISNIHHIGFNYHSTKSSVDYVEELSLHMQYFPSQEYITGT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query528 2.2.26 [Sep-21-2011]
P47245 1161 Nardilysin OS=Rattus norv yes N/A 0.721 0.328 0.454 4e-95
Q8BHG1 1161 Nardilysin OS=Mus musculu yes N/A 0.721 0.328 0.454 5e-95
O43847 1150 Nardilysin OS=Homo sapien yes N/A 0.875 0.401 0.408 3e-94
Q5R4H6 1152 Nardilysin OS=Pongo abeli no N/A 0.714 0.327 0.448 3e-92
Q06010 1027 A-factor-processing enzym yes N/A 0.685 0.352 0.351 2e-56
Q9JHR7 1019 Insulin-degrading enzyme no N/A 0.689 0.357 0.330 3e-55
P35559 1019 Insulin-degrading enzyme no N/A 0.689 0.357 0.327 5e-55
Q24K02 1019 Insulin-degrading enzyme no N/A 0.689 0.357 0.325 2e-54
P14735 1019 Insulin-degrading enzyme no N/A 0.689 0.357 0.322 1e-53
O22941 970 Zinc-metallopeptidase, pe no N/A 0.698 0.380 0.312 2e-50
>sp|P47245|NRDC_RAT Nardilysin OS=Rattus norvegicus GN=Nrd1 PE=2 SV=1 Back     alignment and function desciption
 Score =  348 bits (894), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 175/385 (45%), Positives = 245/385 (63%), Gaps = 4/385 (1%)

Query: 147 RSKQEKKSDEKLAALSLTIGVGSFCD-GHIPGLAHFLEHMVFMGSEKYPEENDFDAFLST 205
           R +  KK+ EK +A +L +GVGSF D   +PGLAHFLEHMVFMGS KYP+EN FDAFL  
Sbjct: 210 RVEARKKTTEKQSAAALCVGVGSFADPDDLPGLAHFLEHMVFMGSLKYPDENGFDAFLKK 269

Query: 206 RGGSSNASTEYETTTFYFDVPEPHLKKSMDIFSNFFISPLLKRDSIASEMDIVDSEFQSS 265
            GGS NAST+ E T F FDV   + K+++D ++ FFI PL+ RD+I  E++ VDSE+Q +
Sbjct: 270 HGGSDNASTDCERTVFQFDVQRKYFKEALDRWAQFFIHPLMIRDAIDREVEAVDSEYQLA 329

Query: 266 ILNDTCRLEQLLATACTKENPAGKFVWGNLETLKNTVDENEL--YAALRNLQKTHYVANH 323
             +D  R E L  +     +P GKF WGN ETLK+   +N +  +A LR     +Y A++
Sbjct: 330 RPSDANRKEMLFGSLARPGHPMGKFFWGNAETLKHEPKKNNIDTHARLREFWMRYYSAHY 389

Query: 324 MTLALQARLDLPTLEAWVVEHFSGIPSNESPKKTFS-VETPFELDRWNRFYTVKPVDDVN 382
           MTL +Q++  L TLE WV E FS IP+N  PK  FS +  PF+   +N+ Y V P+  ++
Sbjct: 390 MTLVVQSKETLDTLEKWVTEIFSQIPNNGLPKPNFSHLTDPFDTPAFNKLYRVVPIRKIH 449

Query: 383 VLYMTWYTPPVQQLYKTKPLDVLSWFIGHEGPGSIMSYLRKKFLAIEIEAGYHESGFEYN 442
            L +TW  PP QQ Y+ KPL  +SW +GHEG GSI+SYLRKK  A+ +  G  E+GFE N
Sbjct: 450 ALTITWALPPQQQHYRVKPLHYISWLVGHEGKGSILSYLRKKCWALALFGGNGETGFEQN 509

Query: 443 HLYTLFQINVTLTDQGVDQIQHIMDIIFQYLRLLSQSPISSEMYAEISNIHHIGFNYHST 502
             Y++F I++TLTD+G +    +   +FQYL++L +      ++ EI  I    F+Y   
Sbjct: 510 STYSVFSISITLTDEGYEHFYEVAHTVFQYLKMLQKLGPEKRVFEEIQKIEDNEFHYQEQ 569

Query: 503 KSSVDYVEELSLHMQYFPSQEYITG 527
              V+YVE +  +MQ +P Q+++TG
Sbjct: 570 TDPVEYVENMCENMQLYPRQDFLTG 594
Cleaves peptide substrates on the N-terminus of arginine residues in dibasic pairs.
Rattus norvegicus (taxid: 10116)
EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: 6EC: 1
>sp|Q8BHG1|NRDC_MOUSE Nardilysin OS=Mus musculus GN=Nrd1 PE=1 SV=1 Back     alignment and function description
>sp|O43847|NRDC_HUMAN Nardilysin OS=Homo sapiens GN=NRD1 PE=1 SV=2 Back     alignment and function description
>sp|Q5R4H6|NRDC_PONAB Nardilysin OS=Pongo abelii GN=NRD1 PE=2 SV=1 Back     alignment and function description
>sp|Q06010|STE23_YEAST A-factor-processing enzyme OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STE23 PE=1 SV=2 Back     alignment and function description
>sp|Q9JHR7|IDE_MOUSE Insulin-degrading enzyme OS=Mus musculus GN=Ide PE=1 SV=1 Back     alignment and function description
>sp|P35559|IDE_RAT Insulin-degrading enzyme OS=Rattus norvegicus GN=Ide PE=1 SV=1 Back     alignment and function description
>sp|Q24K02|IDE_BOVIN Insulin-degrading enzyme OS=Bos taurus GN=IDE PE=2 SV=1 Back     alignment and function description
>sp|P14735|IDE_HUMAN Insulin-degrading enzyme OS=Homo sapiens GN=IDE PE=1 SV=4 Back     alignment and function description
>sp|O22941|PXM16_ARATH Zinc-metallopeptidase, peroxisomal OS=Arabidopsis thaliana GN=PXM16 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query528
242011202 1024 Nardilysin precursor, putative [Pediculu 0.846 0.436 0.439 1e-106
345478824 1144 PREDICTED: nardilysin-like [Nasonia vitr 0.975 0.450 0.400 1e-106
380020506 1132 PREDICTED: nardilysin-like [Apis florea] 0.878 0.409 0.426 1e-103
328784656 1109 PREDICTED: nardilysin isoform 2 [Apis me 0.876 0.417 0.421 1e-103
340726700 1153 PREDICTED: nardilysin-like [Bombus terre 0.914 0.418 0.405 1e-103
350424656 1156 PREDICTED: nardilysin-like [Bombus impat 0.899 0.410 0.411 1e-103
383851358 1148 PREDICTED: nardilysin-like [Megachile ro 0.892 0.410 0.417 1e-102
307175084 1103 Nardilysin [Camponotus floridanus] 0.712 0.340 0.481 1e-102
322799328 1133 hypothetical protein SINV_10157 [Solenop 0.876 0.408 0.434 1e-101
332021096 1098 Nardilysin [Acromyrmex echinatior] 0.748 0.359 0.451 6e-99
>gi|242011202|ref|XP_002426344.1| Nardilysin precursor, putative [Pediculus humanus corporis] gi|212510421|gb|EEB13606.1| Nardilysin precursor, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 204/464 (43%), Positives = 298/464 (64%), Gaps = 17/464 (3%)

Query: 69  VKGLCDRYKYSVIQLKNGLTALLVSDVENLITLDENVTADDKMSMEQESEESGNESGDET 128
           +K   D  +Y ++QL NGL  +LVSDV+ +I LD      DK S++ E+E+S  E  D++
Sbjct: 16  IKSENDLMEYRLLQLDNGLKVILVSDVQKIIDLD---NLSDKNSVDSENEDSNEEPSDDS 72

Query: 129 ASSVDSQGMEVDEFEEADRSKQ--EKKSDEKLAALSLTIGVGSFCDG-HIPGLAHFLEHM 185
            S         ++ EE D+     EK+++EKLAA +L +GVGSF D   IPGLAHF+EHM
Sbjct: 73  IS---------NDSEEEDKKGNLYEKEAEEKLAACALCVGVGSFSDPVDIPGLAHFVEHM 123

Query: 186 VFMGSEKYPEENDFDAFLSTRGGSSNASTEYETTTFYFDVPEPHLKKSMDIFSNFFISPL 245
           VFMGSEKYP+EN FD F+   GGS N STE E TTFY +  E +L++ M+ F+ FFISPL
Sbjct: 124 VFMGSEKYPQENGFDEFIKRHGGSDNGSTECEYTTFYLECNEKYLREGMNRFAQFFISPL 183

Query: 246 LKRDSIASEMDIVDSEFQSSILNDTCRLEQLLATACTKENPAGKFVWGNLETLKNTVDEN 305
           +  +++  E +++ SEF+ S+ +D  R EQ+L +    ++PA KF+WGNL TL+  +D++
Sbjct: 184 MISEAMTREREVIHSEFEMSLPSDGTRREQILGSLAPPDHPASKFLWGNLTTLRTNIDDD 243

Query: 306 ELYAALRNLQKTHYVANHMTLALQARLDLPTLEAWVVEHFSGIPSNESPKKTFS--VETP 363
            LY  +   QK HY A+ MT+A+QARL L TLE++V E FS +PSN  P + FS  + + 
Sbjct: 244 LLYKKVHEFQKRHYSAHRMTVAVQARLSLDTLESFVRESFSDVPSNNLPPEDFSSHIGSF 303

Query: 364 FELDRWNRFYTVKPVDDVNVLYMTWYTPPVQQLYKTKPLDVLSWFIGHEGPGSIMSYLRK 423
            E   +N+   VKPV D+  +++TW  P   + YK+KPLD + W IGHEG GS++SYLRK
Sbjct: 304 GESHDFNKIVWVKPVKDICQVHLTWVLPSYLKKYKSKPLDYVGWLIGHEGKGSLLSYLRK 363

Query: 424 KFLAIEIEAGYHESGFEYNHLYTLFQINVTLTDQGVDQIQHIMDIIFQYLRLLSQSPISS 483
           K  A++ EAG  ESGFE+N +Y+LF I++TLT++G   I  ++ ++F Y+ +L ++  + 
Sbjct: 364 KVWALQCEAGNDESGFEHNSIYSLFSISLTLTEEGYKNINEVIGLVFTYIFMLKKNVPNE 423

Query: 484 EMYAEISNIHHIGFNYHSTKSSVDYVEELSLHMQYFPSQEYITG 527
           ++Y E+  I  I F Y +   S  YVE L+  M  +    YI G
Sbjct: 424 DIYNELKTICEINFRYKTEIPSASYVEILAESMHLYEPHHYIVG 467

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|345478824|ref|XP_001599332.2| PREDICTED: nardilysin-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|380020506|ref|XP_003694124.1| PREDICTED: nardilysin-like [Apis florea] Back     alignment and taxonomy information
>gi|328784656|ref|XP_624437.3| PREDICTED: nardilysin isoform 2 [Apis mellifera] Back     alignment and taxonomy information
>gi|340726700|ref|XP_003401691.1| PREDICTED: nardilysin-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350424656|ref|XP_003493869.1| PREDICTED: nardilysin-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|383851358|ref|XP_003701200.1| PREDICTED: nardilysin-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|307175084|gb|EFN65226.1| Nardilysin [Camponotus floridanus] Back     alignment and taxonomy information
>gi|322799328|gb|EFZ20716.1| hypothetical protein SINV_10157 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|332021096|gb|EGI61483.1| Nardilysin [Acromyrmex echinatior] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query528
UNIPROTKB|O43847 1150 NRD1 "Nardilysin" [Homo sapien 0.746 0.342 0.442 4.7e-99
RGD|3210 1161 Nrd1 "nardilysin 1" [Rattus no 0.746 0.339 0.452 2.3e-97
UNIPROTKB|P47245 1161 Nrd1 "Nardilysin" [Rattus norv 0.746 0.339 0.452 2.3e-97
MGI|MGI:1201386 1161 Nrd1 "nardilysin, N-arginine d 0.746 0.339 0.45 2.3e-97
UNIPROTKB|J9P4J0 1159 NRD1 "Uncharacterized protein" 0.746 0.339 0.45 2.9e-97
UNIPROTKB|F1NLC8 1159 NRD1 "Uncharacterized protein" 0.746 0.339 0.436 2.6e-95
UNIPROTKB|E2RT71 1227 NRD1 "Uncharacterized protein" 0.748 0.321 0.438 1.3e-94
UNIPROTKB|F1S6G2 1156 NRD1 "Uncharacterized protein" 0.717 0.327 0.451 6.9e-94
UNIPROTKB|B1AKJ5 1219 NRD1 "Nardilysin" [Homo sapien 0.748 0.324 0.431 2.2e-93
ZFIN|ZDB-GENE-070912-417 1109 si:dkey-193b15.9 "si:dkey-193b 0.706 0.336 0.448 2.7e-92
UNIPROTKB|O43847 NRD1 "Nardilysin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
 Score = 890 (318.4 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
 Identities = 177/400 (44%), Positives = 254/400 (63%)

Query:   132 VDSQGMEVDEFEEADRSKQEKKSDEKLAALSLTIGVGSFCD-GHIPGLAHFLEHMVFMGS 190
             +D++  E++E EE  R++  KK+ EK +A +L +GVGSF D   +PGLAHFLEHMVFMGS
Sbjct:   185 LDTEDNELEELEE--RAEARKKTTEKQSAAALCVGVGSFADPDDLPGLAHFLEHMVFMGS 242

Query:   191 EKYPEENDFDAFLSTRGGSSNASTEYETTTFYFDVPEPHLKKSMDIFSNFFISPLLKRDS 250
              KYP+EN FDAFL   GGS NAST+ E T F FDV   + K+++D ++ FFI PL+ RD+
Sbjct:   243 LKYPDENGFDAFLKKHGGSDNASTDCERTVFQFDVQRKYFKEALDRWAQFFIHPLMIRDA 302

Query:   251 IASEMDIVDSEFQSSILNDTCRLEQLLATACTKENPAGKFVWGNLETLKNTVDENEL--Y 308
             I  E++ VDSE+Q +  +D  R E L  +     +P GKF WGN ETLK+   +N +  +
Sbjct:   303 IDREVEAVDSEYQLARPSDANRKEMLFGSLARPGHPMGKFFWGNAETLKHEPRKNNIDTH 362

Query:   309 AALRNLQKTHYVANHMTLALQARLDLPTLEAWVVEHFSGIPSNESPKKTFSVET-PFELD 367
             A LR     +Y +++MTL +Q++  L TLE WV E FS IP+N  P+  F   T PF+  
Sbjct:   363 ARLREFWMRYYSSHYMTLVVQSKETLDTLEKWVTEIFSQIPNNGLPRPNFGHLTDPFDTP 422

Query:   368 RWNRFYTVKPVDDVNVLYMTWYTPPVQQLYKTKPLDVLSWFIGHEGPGSIMSYLRKKFLA 427
              +N+ Y V P+  ++ L +TW  PP QQ Y+ KPL  +SW +GHEG GSI+S+LRKK  A
Sbjct:   423 AFNKLYRVVPIRKIHALTITWALPPQQQHYRVKPLHYISWLVGHEGKGSILSFLRKKCWA 482

Query:   428 IEIEAGYHESGFEYNHLYTLFQINVTLTDQGVDQIQHIMDIIFQYLRLLSQSPISSEMYA 487
             + +  G  E+GFE N  Y++F I++TLTD+G +    +   +FQYL++L +      ++ 
Sbjct:   483 LALFGGNGETGFEQNSTYSVFSISITLTDEGYEHFYEVAYTVFQYLKMLQKLGPEKRIFE 542

Query:   488 EISNIHHIGFNYHSTKSSVDYVEELSLHMQYFPSQEYITG 527
             EI  I    F+Y      V+YVE +  +MQ +P Q+ +TG
Sbjct:   543 EIRKIEDNEFHYQEQTDPVEYVENMCENMQLYPLQDILTG 582
GO:0046872 "metal ion binding" evidence=IEA
GO:0004222 "metalloendopeptidase activity" evidence=NAS
GO:0006508 "proteolysis" evidence=NAS
GO:0005829 "cytosol" evidence=TAS
GO:0009986 "cell surface" evidence=TAS
GO:0048408 "epidermal growth factor binding" evidence=TAS
GO:0016477 "cell migration" evidence=TAS
GO:0008283 "cell proliferation" evidence=TAS
GO:0007528 "neuromuscular junction development" evidence=TAS
GO:0051044 "positive regulation of membrane protein ectodomain proteolysis" evidence=IDA
GO:0005515 "protein binding" evidence=IPI
GO:0052548 "regulation of endopeptidase activity" evidence=IDA
RGD|3210 Nrd1 "nardilysin 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P47245 Nrd1 "Nardilysin" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1201386 Nrd1 "nardilysin, N-arginine dibasic convertase, NRD convertase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|J9P4J0 NRD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1NLC8 NRD1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E2RT71 NRD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1S6G2 NRD1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|B1AKJ5 NRD1 "Nardilysin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070912-417 si:dkey-193b15.9 "si:dkey-193b15.9" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.240.691

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query528
COG1025 937 COG1025, Ptr, Secreted/periplasmic Zn-dependent pe 2e-81
PRK15101 961 PRK15101, PRK15101, protease3; Provisional 1e-41
TIGR02110 696 TIGR02110, PQQ_syn_pqqF, coenzyme PQQ biosynthesis 4e-33
COG0612438 COG0612, PqqL, Predicted Zn-dependent peptidases [ 2e-28
pfam00675149 pfam00675, Peptidase_M16, Insulinase (Peptidase fa 3e-26
pfam05193182 pfam05193, Peptidase_M16_C, Peptidase M16 inactive 3e-21
COG1026 978 COG1026, COG1026, Predicted Zn-dependent peptidase 6e-07
>gnl|CDD|223956 COG1025, Ptr, Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
 Score =  272 bits (697), Expect = 2e-81
 Identities = 126/365 (34%), Positives = 193/365 (52%), Gaps = 11/365 (3%)

Query: 159 AALSLTIGVGSFCD-GHIPGLAHFLEHMVFMGSEKYPEENDFDAFLSTRGGSSNASTEYE 217
           ++ +L + VGSF D    PGLAHFLEHM+FMGSEKYP+E  F  FLS  GGS NAST  E
Sbjct: 46  SSAALVVPVGSFDDPEEYPGLAHFLEHMLFMGSEKYPDEGGFSEFLSKHGGSHNASTAGE 105

Query: 218 TTTFYFDVPEPHLKKSMDIFSNFFISPLLKRDSIASEMDIVDSEFQSSILNDTCRLEQLL 277
            T FYF+V    L+ ++D F++FFI PL  ++++  E + V+SEF  ++ +D  R+ Q+ 
Sbjct: 106 RTAFYFEVENDALEGALDRFADFFIEPLFNKEALDRERNAVNSEFTMNLTSDGWRMYQVQ 165

Query: 278 ATACTKENPAGKFVWGNLETLKNTVDENELYAALRNLQKTHYVANHMTLALQARLDLPTL 337
           A      +P  KF  GNLETL +      +   L+   + HY AN+M L +     L  L
Sbjct: 166 ALTANPGHPLSKFSTGNLETL-SDKPGLVVQQELKEFHEKHYSANNMKLVIYGNQPLDEL 224

Query: 338 EAWVVEHFSGIP--SNESPKKTFSVETPFELDRWNRFYTVKPVDDVNVLYMTWYTPPVQQ 395
                + F  IP  + + P     V T  +  +      + P      L + +       
Sbjct: 225 AKLAADLFGDIPNRARKIPPIPVPVVTDEQTGKIIH---IVPAKPRPRLRIYFPIDDNSA 281

Query: 396 LYKTKPLDVLSWFIGHEGPGSIMSYLRKKFLAIEIEAGYHESGFEYNHLYTLFQINVTLT 455
            +++KP + LS  IG+E PGS++++L+K+ L  E+ AG        +  Y +F I+  LT
Sbjct: 282 KFRSKPDEYLSHLIGNESPGSLLAWLKKQGLITELSAG----LDPISGNYGVFAISYELT 337

Query: 456 DQGVDQIQHIMDIIFQYLRLLSQSPISSEMYAEISNIHHIGFNYHSTKSSVDYVEELSLH 515
           D+G+     ++ + FQYL LL +  I    + E+ N+  + F Y S    +DYV  L+ +
Sbjct: 338 DKGLAHYDRVIALTFQYLNLLREKGIPKYTFDELQNVLDLDFRYPSKTRPMDYVSWLADN 397

Query: 516 MQYFP 520
           M+  P
Sbjct: 398 MEREP 402

Length = 937
>gnl|CDD|185056 PRK15101, PRK15101, protease3; Provisional Back     alignment and domain information
>gnl|CDD|233732 TIGR02110, PQQ_syn_pqqF, coenzyme PQQ biosynthesis probable peptidase PqqF Back     alignment and domain information
>gnl|CDD|223685 COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only] Back     alignment and domain information
>gnl|CDD|216056 pfam00675, Peptidase_M16, Insulinase (Peptidase family M16) Back     alignment and domain information
>gnl|CDD|218490 pfam05193, Peptidase_M16_C, Peptidase M16 inactive domain Back     alignment and domain information
>gnl|CDD|223957 COG1026, COG1026, Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 528
KOG0959|consensus 974 100.0
COG1025 937 Ptr Secreted/periplasmic Zn-dependent peptidases, 100.0
PRK15101 961 protease3; Provisional 100.0
TIGR02110 696 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable pe 100.0
COG0612438 PqqL Predicted Zn-dependent peptidases [General fu 100.0
KOG0960|consensus467 100.0
KOG2067|consensus472 100.0
PTZ00432 1119 falcilysin; Provisional 100.0
PRK15101961 protease3; Provisional 99.95
COG1026 978 Predicted Zn-dependent peptidases, insulinase-like 99.94
KOG2583|consensus429 99.94
PF00675149 Peptidase_M16: Insulinase (Peptidase family M16) T 99.91
KOG2019|consensus 998 99.9
PF05193184 Peptidase_M16_C: Peptidase M16 inactive domain; In 99.88
KOG0961|consensus 1022 99.85
COG1026978 Predicted Zn-dependent peptidases, insulinase-like 99.43
PTZ004321119 falcilysin; Provisional 99.3
KOG2019|consensus998 99.13
COG1025937 Ptr Secreted/periplasmic Zn-dependent peptidases, 98.82
KOG0959|consensus974 98.69
PF03410 590 Peptidase_M44: Protein G1; InterPro: IPR005072 In 98.23
PHA03081 595 putative metalloprotease; Provisional 98.06
KOG0961|consensus1022 98.02
PF08367248 M16C_assoc: Peptidase M16C associated; InterPro: I 97.12
KOG2067|consensus472 94.21
COG0612438 PqqL Predicted Zn-dependent peptidases [General fu 93.46
KOG0960|consensus467 88.5
PF00675149 Peptidase_M16: Insulinase (Peptidase family M16) T 88.24
>KOG0959|consensus Back     alignment and domain information 
Probab=100.00  E-value=4.7e-62  Score=532.36  Aligned_cols=399  Identities=38%  Similarity=0.687  Sum_probs=381.5

Q ss_pred             CCCCCCCCCCCcceeEEecCCCEEEEEecCCcccccccccccccccchhhhhcccCCCCCCCCCCCCCCCCccchhhhhh
Q psy12151         66 PLPVKGLCDRYKYSVIQLKNGLTALLVSDVENLITLDENVTADDKMSMEQESEESGNESGDETASSVDSQGMEVDEFEEA  145 (528)
Q Consensus        66 ~~~~~~~~d~~~~~~~~L~NGl~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (528)
                      ..++|+..|.+.||+++|+|||+|+|++|+..                                                
T Consensus        16 ~~~~k~~~d~r~yr~~~L~Ngl~alLisDp~t------------------------------------------------   47 (974)
T KOG0959|consen   16 VSIVKSLGDTREYRGIELTNGLRALLISDPKT------------------------------------------------   47 (974)
T ss_pred             cccccCCCCccceeEEEecCCceEEEecCCCC------------------------------------------------
Confidence            44899999999999999999999999999865                                                


Q ss_pred             hhhhhhccCccceEEEEEEecccCCcCC-CCCChHHHHHHHhccCCCCCCChhHHHHHHHhcCCccceEecCCeEEEEEE
Q psy12151        146 DRSKQEKKSDEKLAALSLTIGVGSFCDG-HIPGLAHFLEHMVFMGSEKYPEENDFDAFLSTRGGSSNASTEYETTTFYFD  224 (528)
Q Consensus       146 ~~~~~~~~~~~~~v~i~l~v~~Gs~~e~-~~~Glahllehllf~Gt~~~~~~~~l~~~L~~~G~~~na~t~~d~t~~~~~  224 (528)
                                 +.+++++.|.+||..|| +.+|+|||+|||+|+||++||.++.+..+|.++||+.||+|+.++|+|+|.
T Consensus        48 -----------D~ssaal~V~vGS~~DP~dl~GLAHF~EHMlFmGS~KYP~En~y~~~lsk~gGssNA~T~~e~T~y~F~  116 (974)
T KOG0959|consen   48 -----------DKSSAALDVKVGSFSDPEDLQGLAHFCEHMLFMGSEKYPDENEYSKFLSKNGGSSNAYTDSEHTNYYFD  116 (974)
T ss_pred             -----------CccceeeeeeccccCCccccccHHHHHHHHHhhccccCCCcchhHHHHHhcCCccccccccccceEEEe
Confidence                       37899999999999999 999999999999999999999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHcCCCCCCCCCCCCChhhhcccccc
Q psy12151        225 VPEPHLKKSMDIFSNFFISPLLKRDSIASEMDIVDSEFQSSILNDTCRLEQLLATACTKENPAGKFVWGNLETLKNTVDE  304 (528)
Q Consensus       225 ~~~~~l~~~L~lla~~l~~P~f~~~~~~~ek~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~G~~e~L~~it~~  304 (528)
                      +..+.|+.||++|+++|.+|.|.++.++||+.+|.+|++.+.+++.|+..++++.++-++|||++|.+|+.++|...+..
T Consensus       117 V~~~~l~~ALDrFaqFf~~Plf~~~a~eREv~AVdSE~~~nl~~D~wr~~ql~~~l~~~~hp~~kF~tGN~~tL~~~p~~  196 (974)
T KOG0959|consen  117 VQHDHLEGALDRFAQFFSDPLFNKSATEREVGAVDSEHEKNLNSDGWRFDQLLRSLSNPGHPYSKFSTGNKKTLLEGPRE  196 (974)
T ss_pred             cchHHHHHHHHHHHHHhhCcccChHHHHHHHHHHHHHHHhccCcchhHHHHHHHHhcCCCCcchhccccchhhhhhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999977


Q ss_pred             hHHHHHHHHHHHhhcCCCCcEEEEEcCCCHHHHHHHHHHHhcCCCCCCCCCCCCCcCCCcccCCCceEEEEeecCCcceE
Q psy12151        305 NELYAALRNLQKTHYVANHMTLALQARLDLPTLEAWVVEHFSGIPSNESPKKTFSVETPFELDRWNRFYTVKPVDDVNVL  384 (528)
Q Consensus       305 ~~i~e~L~~f~~~~y~~~~~~LvivGdi~~d~l~~lv~~~f~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  384 (528)
                      +.+++.|++||++||++++|+|||+|+.++|.++.++.+.|+.+++...+.|.++. .|+.....++.+.+.|.++...+
T Consensus       197 ~~~r~~L~kF~k~~Yssn~M~l~i~G~eslD~Le~lv~~~F~~i~N~~~~~p~f~~-~p~~~e~~~~~~~v~pik~~~~l  275 (974)
T KOG0959|consen  197 IDLRDELLKFYKNWYSSNIMTLVIVGKESLDVLESLVTRLFDEISNKKKPRPVFPE-PPFLPEELKKLVRVVPIKDGRSL  275 (974)
T ss_pred             chHHHHHHHHHHhhcccccceEEEEcCCChhHHHHHHHHHcccccccCCCCCcccC-CCCChHHhCcEEEEEeccccceE
Confidence            78899999999999999999999999999999999999999999999888877765 47777778888999999999999


Q ss_pred             EEEEEcCCccccccCCHHHHHHHHHhCCCCChHHHHHHHccccceeEeeeccccccccCcceEEEEEEEeccchhccHHH
Q psy12151        385 YMTWYTPPVQQLYKTKPLDVLSWFIGHEGPGSIMSYLRKKFLAIEIEAGYHESGFEYNHLYTLFQINVTLTDQGVDQIQH  464 (528)
Q Consensus       385 ~l~f~~p~~~~~~~~~~l~vl~~iLg~~~~~sL~~~LRe~glaysv~a~~~~~~~~~~~~~g~f~i~~~~~~~g~~~~~~  464 (528)
                      .|.|++|+....++..+.+++++++|++|.|+|+.+|+++||+.++.++...    ...+++.|.|.+.++.+|++++++
T Consensus       276 ~is~~~p~~~~~y~~kP~~y~~hLigheg~GSL~~~Lk~~gw~~sl~a~~~~----~as~~~~f~v~idLtd~G~e~~~~  351 (974)
T KOG0959|consen  276 MISWPVPPLNHHYKSKPLRYLSHLIGHEGPGSLLSYLKRLGWATSLEAGIPE----FASGYSFFNVSIDLTDEGLEHVDE  351 (974)
T ss_pred             EEEEecCCcccccccCcHHHHHHHhccCCcchHHHHHHHhhchheeecCCCc----cccccceEEEEEEeccccchhHHH
Confidence            9999999999889999999999999999999999999999999999998863    237889999999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHhccccCCCCCcHHHHHHHHHHcccCCccccccCC
Q psy12151        465 IMDIIFQYLRLLSQSPISSEMYAEISNIHHIGFNYHSTKSSVDYVEELSLHMQYFPSQEYITGT  528 (528)
Q Consensus       465 v~~~i~~~l~~L~~~git~~el~~ak~~~~~~f~~~~~~~~~~~~~~la~~l~~~~~e~~l~~~  528 (528)
                      ++..++++|..|+..|..++.+++...+-...|+|..+++|..++..++.+|++||++++|+|.
T Consensus       352 ii~~~f~yi~~l~~~~~~~~i~~E~~~~~~~~Frf~~k~~p~~~~~~~~~nlq~~P~~~il~~~  415 (974)
T KOG0959|consen  352 IIGLVFNYIKLLQSAGPEKWIFKELQLISEVKFRFQDKEPPMEYASEIASNLQYYPVEDVLTGS  415 (974)
T ss_pred             HHHHHHHHHHHHHhcCchhHHHHHHHHhhhhheeecccCCcHHHHHHHHhhcccCChHHhhcch
Confidence            9999999999999999999999999999999999999999999999999999999999999873

>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK15101 protease3; Provisional Back     alignment and domain information
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF Back     alignment and domain information
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only] Back     alignment and domain information
>KOG0960|consensus Back     alignment and domain information
>KOG2067|consensus Back     alignment and domain information
>PTZ00432 falcilysin; Provisional Back     alignment and domain information
>PRK15101 protease3; Provisional Back     alignment and domain information
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] Back     alignment and domain information
>KOG2583|consensus Back     alignment and domain information
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification Back     alignment and domain information
>KOG2019|consensus Back     alignment and domain information
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG0961|consensus Back     alignment and domain information
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] Back     alignment and domain information
>PTZ00432 falcilysin; Provisional Back     alignment and domain information
>KOG2019|consensus Back     alignment and domain information
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0959|consensus Back     alignment and domain information
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PHA03081 putative metalloprotease; Provisional Back     alignment and domain information
>KOG0961|consensus Back     alignment and domain information
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG2067|consensus Back     alignment and domain information
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only] Back     alignment and domain information
>KOG0960|consensus Back     alignment and domain information
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query528
3qz2_A 990 The Structure Of Cysteine-Free Human Insulin Degrad 2e-56
3p7l_A 978 Rat Insulin Degrading Enzyme (Insulysin) Length = 9 2e-56
3tuv_A 1019 Crystal Structure Of Insulysin With Bound Atp Lengt 3e-56
3e4z_A 990 Crystal Structure Of Human Insulin Degrading Enzyme 3e-56
3hgz_A 969 Crystal Structure Of Human Insulin-Degrading Enzyme 4e-56
2wby_A 990 Crystal Structure Of Human Insulin-Degrading Enzyme 4e-56
3e4a_A 1019 Human Ide-Inhibitor Complex At 2.6 Angstrom Resolut 4e-56
3cww_A 990 Crystal Structure Of Ide-Bradykinin Complex Length 2e-55
3p7o_A 1019 Rat Insulin Degrading Enzyme (Insulysin) E111f Muta 3e-55
2jg4_A 990 Substrate-Free Ide Structure In Its Closed Conforma 4e-55
2g47_A 990 Crystal Structure Of Human Insulin-Degrading Enzyme 1e-54
1q2l_A 939 Crystal Structure Of Pitrilysin Length = 939 8e-41
1hr6_B443 Yeast Mitochondrial Processing Peptidase Length = 4 3e-11
1hr7_B443 Yeast Mitochondrial Processing Peptidase Beta-E73q 8e-11
3hdi_A421 Crystal Structure Of Bacillus Halodurans Metallo Pe 4e-10
3amj_C437 The Crystal Structure Of The Heterodimer Of M16b Pe 1e-08
3ami_A445 The Crystal Structure Of The M16b Metallopeptidase 1e-08
1bcc_A446 Cytochrome Bc1 Complex From Chicken Length = 446 2e-07
3eoq_A406 The Crystal Structure Of Putative Zinc Protease Bet 9e-07
1bgy_A446 Cytochrome Bc1 Complex From Bovine Length = 446 8e-06
1qcr_A446 Crystal Structure Of Bovine Mitochondrial Cytochrom 9e-06
1sqb_A480 Crystal Structure Analysis Of Bovine Bc1 With Azoxy 9e-06
3cwb_A446 Chicken Cytochrome Bc1 Complex Inhibited By An Iodi 9e-06
>pdb|3QZ2|A Chain A, The Structure Of Cysteine-Free Human Insulin Degrading Enzyme Length = 990 Back     alignment and structure 
Iteration: 1

 Score =  217 bits (552), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/372 (32%), Positives = 204/372 (54%), Gaps = 8/372 (2%)
Query: 159 AALSLTIGVGSFCDG-HIPGLAHFLEHMVFMGSEKYPEENDFDAFLSTRGGSSNASTEYE 217
           ++ +L + +GS  D  +I GL+HFLEHM+F+G++KYP+EN++  FLS   GSSNA T  E
Sbjct: 57  SSAALDVHIGSLSDPPNIAGLSHFLEHMLFLGTKKYPKENEYSQFLSEHAGSSNAFTSGE 116
Query: 218 TTTFYFDVPEPHLKKSMDIFSNFFISPLLKRDSIASEMDIVDSEFQSSILNDTCRLEQLL 277
            T +YFDV   HL+ ++D F+ FF+SPL    +   E++ VDSE + +++ND  RL QL 
Sbjct: 117 HTNYYFDVSHEHLEGALDRFAQFFLSPLFDESAKDREVNAVDSEHEKNVMNDAWRLFQLE 176
Query: 278 ATACTKENPAGKFVWGNLETLKNTVDEN--ELYAALRNLQKTHYVANHMTLALQARLDLP 335
                 ++P  KF  GN  TL+   ++   ++   L      +Y +N M + +  R  L 
Sbjct: 177 KATGNPKHPFSKFGTGNKYTLETRPNQEGIDVRQELLKFHSAYYSSNLMAVVVLGRESLD 236
Query: 336 TLEAWVVEHFSGIPSNESPKKTFSVETPFELDRWNRFYTVKPVDDVNVLYMTWYTPPVQQ 395
            L   VV+ FS + +   P   F  E PF+ +   + Y + P+ D+  LY+T+  P +Q+
Sbjct: 237 DLTNLVVKLFSEVENKNVPLPEFP-EHPFQEEHLKQLYKIVPIKDIRNLYVTFPIPDLQK 295
Query: 396 LYKTKPLDVLSWFIGHEGPGSIMSYLRKKFLAIEIEAGYHESGFEYNHLYTLFQINVTLT 455
            YK+ P   L   IGHEGPGS++S L+ K     +  G  E        +  F INV LT
Sbjct: 296 YYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQKEGA----RGFMFFIINVDLT 351
Query: 456 DQGVDQIQHIMDIIFQYLRLLSQSPISSEMYAEISNIHHIGFNYHSTKSSVDYVEELSLH 515
           ++G+  ++ I+  +FQY++ L        ++ E+ +++ + F +   +    Y  +++  
Sbjct: 352 EEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPRGYTSKIAGI 411
Query: 516 MQYFPSQEYITG 527
           + Y+P +E +T 
Sbjct: 412 LHYYPLEEVLTA 423
>pdb|3P7L|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) Length = 978 Back     alignment and structure
>pdb|3TUV|A Chain A, Crystal Structure Of Insulysin With Bound Atp Length = 1019 Back     alignment and structure
>pdb|3E4Z|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In Complex With Insulin-Like Growth Factor Ii Length = 990 Back     alignment and structure
>pdb|3HGZ|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Amylin Length = 969 Back     alignment and structure
>pdb|2WBY|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Insulin Length = 990 Back     alignment and structure
>pdb|3E4A|A Chain A, Human Ide-Inhibitor Complex At 2.6 Angstrom Resolution Length = 1019 Back     alignment and structure
>pdb|3CWW|A Chain A, Crystal Structure Of Ide-Bradykinin Complex Length = 990 Back     alignment and structure
>pdb|3P7O|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) E111f Mutant With Two Bound Peptides Length = 1019 Back     alignment and structure
>pdb|2JG4|A Chain A, Substrate-Free Ide Structure In Its Closed Conformation Length = 990 Back     alignment and structure
>pdb|2G47|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Amyloid-Beta (1-40) Length = 990 Back     alignment and structure
>pdb|1Q2L|A Chain A, Crystal Structure Of Pitrilysin Length = 939 Back     alignment and structure
>pdb|1HR6|B Chain B, Yeast Mitochondrial Processing Peptidase Length = 443 Back     alignment and structure
>pdb|1HR7|B Chain B, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant Length = 443 Back     alignment and structure
>pdb|3HDI|A Chain A, Crystal Structure Of Bacillus Halodurans Metallo Peptidase Length = 421 Back     alignment and structure
>pdb|3AMJ|C Chain C, The Crystal Structure Of The Heterodimer Of M16b Peptidase From Sphingomonas Sp. A1 Length = 437 Back     alignment and structure
>pdb|3AMI|A Chain A, The Crystal Structure Of The M16b Metallopeptidase Subunit From Sphingomonas Sp. A1 Length = 445 Back     alignment and structure
>pdb|1BCC|A Chain A, Cytochrome Bc1 Complex From Chicken Length = 446 Back     alignment and structure
>pdb|3EOQ|A Chain A, The Crystal Structure Of Putative Zinc Protease Beta- Subunit From Thermus Thermophilus Hb8 Length = 406 Back     alignment and structure
>pdb|1BGY|A Chain A, Cytochrome Bc1 Complex From Bovine Length = 446 Back     alignment and structure
>pdb|1QCR|A Chain A, Crystal Structure Of Bovine Mitochondrial Cytochrome Bc1 Complex, Alpha Carbon Atoms Only Length = 446 Back     alignment and structure
>pdb|1SQB|A Chain A, Crystal Structure Analysis Of Bovine Bc1 With Azoxystrobin Length = 480 Back     alignment and structure
>pdb|3CWB|A Chain A, Chicken Cytochrome Bc1 Complex Inhibited By An Iodinated Analogue Of The Polyketide Crocacin-d Length = 446 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query528
3cww_A 990 Insulysin, insulin-degrading enzyme, insulinase; A 1e-108
1q2l_A 939 Protease III; hydrolase; 2.20A {Escherichia coli s 1e-104
3ami_A445 Zinc peptidase; alpha/beta, zinc binding, hydrolas 3e-35
3go9_A492 Insulinase family protease; IDP00573, structural g 4e-29
3eoq_A406 Putative zinc protease; two similar domains of bet 1e-22
2fge_A 995 Atprep2;, zinc metalloprotease (insulinase family) 9e-21
3hdi_A421 Processing protease; CAGE structure, M16B peptidas 3e-19
1hr6_A475 Alpha-MPP, mitochondrial processing peptidase alph 4e-19
1hr6_B443 Beta-MPP, mitochondrial processing peptidase beta 2e-18
3gwb_A434 Peptidase M16 inactive domain family protein; pept 5e-18
1pp9_A446 Ubiquinol-cytochrome C reductase complex core Pro 2e-17
3cx5_A431 Cytochrome B-C1 complex subunit 1, mitochondrial; 9e-17
1pp9_B439 Ubiquinol-cytochrome C reductase complex core Pro 2e-16
3amj_B424 Zinc peptidase inactive subunit; alpha/beta, zinc 2e-16
3s5m_A 1193 Falcilysin; M16 metalloprotease, peptidase, hydrol 3e-15
3d3y_A425 Uncharacterized protein; APC29635, conserved prote 2e-12
3cx5_B352 Cytochrome B-C1 complex subunit 2, mitochondrial; 4e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Length = 990 Back     alignment and structure
 Score =  344 bits (884), Expect = e-108
 Identities = 119/376 (31%), Positives = 201/376 (53%), Gaps = 8/376 (2%)

Query: 155 DEKLAALSLTIGVGSFCD-GHIPGLAHFLEHMVFMGSEKYPEENDFDAFLSTRGGSSNAS 213
               ++ +L + +GS  D  +I GL+HFL+HM+F+G++KYP+EN++  FLS   GSSNA 
Sbjct: 53  TTDKSSAALDVHIGSLSDPPNIAGLSHFLQHMLFLGTKKYPKENEYSQFLSEHAGSSNAF 112

Query: 214 TEYETTTFYFDVPEPHLKKSMDIFSNFFISPLLKRDSIASEMDIVDSEFQSSILNDTCRL 273
           T  E T +YFDV   HL+ ++D F+ FF+SPL    +   E++ VDSE + +++ND  RL
Sbjct: 113 TSGEHTNYYFDVSHEHLEGALDRFAQFFLSPLFDESAKDREVNAVDSEHEKNVMNDAWRL 172

Query: 274 EQLLATACTKENPAGKFVWGNLETLKN--TVDENELYAALRNLQKTHYVANHMTLALQAR 331
            QL       ++P  KF  GN  TL+     +  ++   L      +Y +N M + +  R
Sbjct: 173 FQLEKATGNPKHPFSKFGTGNKYTLETRPNQEGIDVRQELLKFHSAYYSSNLMAVVVLGR 232

Query: 332 LDLPTLEAWVVEHFSGIPSNESPKKTFSVETPFELDRWNRFYTVKPVDDVNVLYMTWYTP 391
             L  L   VV+ FS + +   P   F    PF+ +   + Y + P+ D+  LY+T+  P
Sbjct: 233 ESLDDLTNLVVKLFSEVENKNVPLPEFPEH-PFQEEHLKQLYKIVPIKDIRNLYVTFPIP 291

Query: 392 PVQQLYKTKPLDVLSWFIGHEGPGSIMSYLRKKFLAIEIEAGYHESGFEYNHLYTLFQIN 451
            +Q+ YK+ P   L   IGHEGPGS++S L+ K     +  G           +  F IN
Sbjct: 292 DLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQKAGARG----FMFFIIN 347

Query: 452 VTLTDQGVDQIQHIMDIIFQYLRLLSQSPISSEMYAEISNIHHIGFNYHSTKSSVDYVEE 511
           V LT++G+  ++ I+  +FQY++ L        ++ E+ +++ + F +   +    Y  +
Sbjct: 348 VDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPRGYTSK 407

Query: 512 LSLHMQYFPSQEYITG 527
           ++  + Y+P +E +T 
Sbjct: 408 IAGILHYYPLEEVLTA 423
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 939 Back     alignment and structure
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C Length = 445 Back     alignment and structure
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} Length = 492 Back     alignment and structure
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Length = 406 Back     alignment and structure
>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 995 Back     alignment and structure
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} Length = 421 Back     alignment and structure
>1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* Length = 475 Back     alignment and structure
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* Length = 443 Back     alignment and structure
>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} Length = 434 Back     alignment and structure
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... Length = 446 Back     alignment and structure
>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Length = 431 Back     alignment and structure
>1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... Length = 439 Back     alignment and structure
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} Length = 424 Back     alignment and structure
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A Length = 1193 Back     alignment and structure
>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Length = 425 Back     alignment and structure
>3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B* Length = 352 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query528
1q2l_A 939 Protease III; hydrolase; 2.20A {Escherichia coli s 100.0
3cww_A 990 Insulysin, insulin-degrading enzyme, insulinase; A 100.0
3eoq_A406 Putative zinc protease; two similar domains of bet 100.0
3ami_A445 Zinc peptidase; alpha/beta, zinc binding, hydrolas 100.0
3hdi_A421 Processing protease; CAGE structure, M16B peptidas 100.0
1pp9_A446 Ubiquinol-cytochrome C reductase complex core Pro 100.0
1hr6_B443 Beta-MPP, mitochondrial processing peptidase beta 100.0
1hr6_A475 Alpha-MPP, mitochondrial processing peptidase alph 100.0
3amj_B424 Zinc peptidase inactive subunit; alpha/beta, zinc 100.0
3gwb_A434 Peptidase M16 inactive domain family protein; pept 100.0
1pp9_B439 Ubiquinol-cytochrome C reductase complex core Pro 100.0
3d3y_A425 Uncharacterized protein; APC29635, conserved prote 100.0
2fge_A 995 Atprep2;, zinc metalloprotease (insulinase family) 100.0
3cx5_A431 Cytochrome B-C1 complex subunit 1, mitochondrial; 100.0
3go9_A492 Insulinase family protease; IDP00573, structural g 100.0
3s5m_A 1193 Falcilysin; M16 metalloprotease, peptidase, hydrol 100.0
3cx5_B352 Cytochrome B-C1 complex subunit 2, mitochondrial; 100.0
2fge_A995 Atprep2;, zinc metalloprotease (insulinase family) 99.94
1q2l_A939 Protease III; hydrolase; 2.20A {Escherichia coli s 99.94
3cww_A990 Insulysin, insulin-degrading enzyme, insulinase; A 99.9
3s5m_A1193 Falcilysin; M16 metalloprotease, peptidase, hydrol 99.85
3ih6_A197 Putative zinc protease; bordetella pertussis toham 99.5
3ih6_A197 Putative zinc protease; bordetella pertussis toham 98.0
3hdi_A421 Processing protease; CAGE structure, M16B peptidas 97.76
3cx5_A431 Cytochrome B-C1 complex subunit 1, mitochondrial; 97.59
3eoq_A406 Putative zinc protease; two similar domains of bet 97.57
3gwb_A434 Peptidase M16 inactive domain family protein; pept 97.55
1hr6_B443 Beta-MPP, mitochondrial processing peptidase beta 97.52
1hr6_A475 Alpha-MPP, mitochondrial processing peptidase alph 97.47
3amj_B424 Zinc peptidase inactive subunit; alpha/beta, zinc 97.44
1pp9_A446 Ubiquinol-cytochrome C reductase complex core Pro 97.4
1pp9_B439 Ubiquinol-cytochrome C reductase complex core Pro 97.23
3ami_A445 Zinc peptidase; alpha/beta, zinc binding, hydrolas 96.92
3d3y_A425 Uncharacterized protein; APC29635, conserved prote 96.61
3go9_A492 Insulinase family protease; IDP00573, structural g 95.29
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Back     alignment and structure
Probab=100.00  E-value=1e-56  Score=517.65  Aligned_cols=395  Identities=30%  Similarity=0.470  Sum_probs=353.1

Q ss_pred             cCCCCCCCCCCCCcceeEEecCCCEEEEEecCCcccccccccccccccchhhhhcccCCCCCCCCCCCCCCCCccchhhh
Q psy12151         64 RLPLPVKGLCDRYKYSVIQLKNGLTALLVSDVENLITLDENVTADDKMSMEQESEESGNESGDETASSVDSQGMEVDEFE  143 (528)
Q Consensus        64 ~~~~~~~~~~d~~~~~~~~L~NGl~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (528)
                      ....|+|++.|.+.|+.++|+|||+|++++++..|                                             
T Consensus         7 ~~~~~~~~~~d~~~~~~~~L~NGl~v~~~~~~~~~---------------------------------------------   41 (939)
T 1q2l_A            7 IQETIRKSDKDNRQYQAIRLDNGMVVLLVSDPQAV---------------------------------------------   41 (939)
T ss_dssp             CCSCCCCCTTCCCEEEEEEETTSCEEEEEECTTCS---------------------------------------------
T ss_pred             ccccCcCCCCCCcceEEEEecCCCEEEEEECCCCC---------------------------------------------
Confidence            33568999999999999999999999999998763                                             


Q ss_pred             hhhhhhhhccCccceEEEEEEecccCCcCC-CCCChHHHHHHHhccCCCCCCChhHHHHHHHhcCCccceEecCCeEEEE
Q psy12151        144 EADRSKQEKKSDEKLAALSLTIGVGSFCDG-HIPGLAHFLEHMVFMGSEKYPEENDFDAFLSTRGGSSNASTEYETTTFY  222 (528)
Q Consensus       144 ~~~~~~~~~~~~~~~v~i~l~v~~Gs~~e~-~~~Glahllehllf~Gt~~~~~~~~l~~~L~~~G~~~na~t~~d~t~~~  222 (528)
                                    .+++++++++|+++|| +.+|+|||+|||+|+||++|+...++.++++.+||.+||+|+.++|+|+
T Consensus        42 --------------~~~~~l~v~~Gs~~e~~~~~GlAH~lEHmlf~Gt~~~p~~~~~~~~l~~~Gg~~NA~T~~d~T~y~  107 (939)
T 1q2l_A           42 --------------KSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSHNASTAPYRTAFY  107 (939)
T ss_dssp             --------------SEEEEEEESCCGGGCCGGGTTHHHHHHHHTTSCBSSSCSTTHHHHHHHTTTCEEEEEECSSCEEEE
T ss_pred             --------------ceEEEEEeCccCCCCCCCCCchHHHHHHHHccCCCCCCCcchHHHHHHHcCCcceEEECCCcEEEE
Confidence                          8999999999999999 9999999999999999999997579999999999999999999999999


Q ss_pred             EEcChhhHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHcCCCCCCCCCCCCChhhhcc--
Q psy12151        223 FDVPEPHLKKSMDIFSNFFISPLLKRDSIASEMDIVDSEFQSSILNDTCRLEQLLATACTKENPAGKFVWGNLETLKN--  300 (528)
Q Consensus       223 ~~~~~~~l~~~L~lla~~l~~P~f~~~~~~~ek~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~G~~e~L~~--  300 (528)
                      +++++++|+.+|++|++++.+|.|++++|++||.+|.+|++.+.++|.+++.+.+..++|++|||+++++|+.++|..  
T Consensus       108 ~~~~~~~l~~~L~~l~d~~~~p~f~~~~~~~Er~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~  187 (939)
T 1q2l_A          108 LEVENDALPGAVDRLADAIAEPLLDKKYAERERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKP  187 (939)
T ss_dssp             EEECGGGHHHHHHHHHHHHHCBCCCSTTHHHHHHHHHHHHHHHTTSHHHHHHHHHHHSSCTTSGGGSCCSCCHHHHSCBT
T ss_pred             EEeCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHhcCCCCCCccCCCCCHHHHhcCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999999  


Q ss_pred             --cccchHHHHHHHHHHHhhcCCCCcEEEEEcCCCHHHHHHHHHHHhcCCCCCCCCCCCCCcCCCcccCCCceEEEEeec
Q psy12151        301 --TVDENELYAALRNLQKTHYVANHMTLALQARLDLPTLEAWVVEHFSGIPSNESPKKTFSVETPFELDRWNRFYTVKPV  378 (528)
Q Consensus       301 --it~~~~i~e~L~~f~~~~y~~~~~~LvivGdi~~d~l~~lv~~~f~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (528)
                        ++     +++|++||++||+|+||+|+|+|++++++++++|+++|+.||++..+.+.... +++........+...|.
T Consensus       188 ~~~~-----~~~l~~f~~~~Y~p~n~~l~v~G~~~~~~l~~~v~~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  261 (939)
T 1q2l_A          188 GNPV-----QQALKDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITV-PVVTDAQKGIIIHYVPA  261 (939)
T ss_dssp             TBCH-----HHHHHHHHHHHCCTTTCEEEEEESSCHHHHHHHHHHTGGGSCCCCCCCCCCCS-CSCCGGGSSEEEEECCS
T ss_pred             CchH-----HHHHHHHHHhccCHhheEEEEEcCCCHHHHHHHHHHHhhhhccCCCCCCCCCC-CCCCHHHcCEEEEEEeC
Confidence              99     99999999999999999999999999999999999999999976544332221 22322223344555566


Q ss_pred             CCcceEEEEEEcCCccccccCCHHHHHHHHHhCCCCChHHHHHHHccccceeEeeeccccccccCcceEEEEEEEeccch
Q psy12151        379 DDVNVLYMTWYTPPVQQLYKTKPLDVLSWFIGHEGPGSIMSYLRKKFLAIEIEAGYHESGFEYNHLYTLFQINVTLTDQG  458 (528)
Q Consensus       379 ~~~~~l~l~f~~p~~~~~~~~~~l~vl~~iLg~~~~~sL~~~LRe~glaysv~a~~~~~~~~~~~~~g~f~i~~~~~~~g  458 (528)
                      .+++.+.++|+.|.....++..++.+++.+||+++.|+|++.||++||+|+++++.....   ....|.|.|++.++++|
T Consensus       262 ~~~~~l~i~~~~~~~~~~~~~~~~~~l~~lLg~~~~s~L~~~L~~~gl~~~~~a~~~~~~---~~~~g~f~i~~~~~~~~  338 (939)
T 1q2l_A          262 LPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVEGISANSDPIV---NGNSGVLAISASLTDKG  338 (939)
T ss_dssp             SCCCEEEEEEEEECCGGGGGGCHHHHHHHHHHCCCTTSHHHHHHHTTCEEEEEEEEESST---TSSEEEEEEEEEECHHH
T ss_pred             CCCcEEEEEEEcCChHHhhhhCHHHHHHHHhcCCCCCcHHHHHHHcCCchheeecccccc---CCCceEEEEEEEEChhh
Confidence            778999999999987655577899999999999999999999999999999998853211   25789999999999876


Q ss_pred             hccHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHhccccCCCCCcHHHHHHHHHHcccCCcccccc
Q psy12151        459 VDQIQHIMDIIFQYLRLLSQSPISSEMYAEISNIHHIGFNYHSTKSSVDYVEELSLHMQYFPSQEYIT  526 (528)
Q Consensus       459 ~~~~~~v~~~i~~~l~~L~~~git~~el~~ak~~~~~~f~~~~~~~~~~~~~~la~~l~~~~~e~~l~  526 (528)
                      .++++++++.++++|+++++.|+++++++++|+.+...|.+...+++..++..++.++..+++++++.
T Consensus       339 ~~~~~~~~~~i~~~l~~l~~~g~~~~el~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  406 (939)
T 1q2l_A          339 LANRDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLD  406 (939)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHTTSCGGGTTT
T ss_pred             hhhHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHhhcCCHHHHhc
Confidence            67999999999999999999999999999999999999988766788899999999998888777654
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Back     alignment and structure
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Back     alignment and structure
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C Back     alignment and structure
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} Back     alignment and structure
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... Back     alignment and structure
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* Back     alignment and structure
>1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* Back     alignment and structure
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} Back     alignment and structure
>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} Back     alignment and structure
>1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... Back     alignment and structure
>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Back     alignment and structure
>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Back     alignment and structure
>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Back     alignment and structure
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} Back     alignment and structure
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A Back     alignment and structure
>3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B* Back     alignment and structure
>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Back     alignment and structure
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Back     alignment and structure
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Back     alignment and structure
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A Back     alignment and structure
>3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A Back     alignment and structure
>3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A Back     alignment and structure
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} Back     alignment and structure
>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Back     alignment and structure
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Back     alignment and structure
>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} Back     alignment and structure
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* Back     alignment and structure
>1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* Back     alignment and structure
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} Back     alignment and structure
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... Back     alignment and structure
>1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... Back     alignment and structure
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C Back     alignment and structure
>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Back     alignment and structure
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 528
d1q2la3240 d.185.1.1 (A:264-503) Protease III {Escherichia co 2e-33
d2fgea4257 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 3e-21
d1q2la4240 d.185.1.1 (A:24-263) Protease III {Escherichia col 1e-20
d3cx5b1202 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 9e-18
d1ppja1232 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 6e-17
d3cx5a1213 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 1e-14
d1hr6b1222 d.185.1.1 (B:24-245) Mitochondrial processing pept 2e-14
d1hr6a1220 d.185.1.1 (A:14-233) Mitochondrial processing pept 4e-11
d1ppjb1219 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 9e-10
d1q2la1229 d.185.1.1 (A:504-732) Protease III {Escherichia co 2e-08
>d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]} Length = 240 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: LuxS/MPP-like metallohydrolase
superfamily: LuxS/MPP-like metallohydrolase
family: MPP-like
domain: Protease III
species: Escherichia coli [TaxId: 562]

 Score =  125 bits (314), Expect = 2e-33
 Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 3/153 (1%)

Query: 375 VKPVDDVNVLYMTWYTPPVQQLYKTKPLDVLSWFIGHEGPGSIMSYLRKKFLAIEIEAGY 434
             P     VL + +        +++K  +++++ IG+  PG++  +L+K+ L   I A  
Sbjct: 18  YVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVEGISANS 77

Query: 435 HESGFEYNHLYTLFQINVTLTDQGVDQIQHIMDIIFQYLRLLSQSPISSEMYAEISNIHH 494
                       +  I+ +LTD+G+     ++  IF YL LL +  I  + + E++N+  
Sbjct: 78  DPIVNGN---SGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDELANVLD 134

Query: 495 IGFNYHSTKSSVDYVEELSLHMQYFPSQEYITG 527
           I F Y S    +DYVE L+  M   P +  +  
Sbjct: 135 IDFRYPSITRDMDYVEWLADTMIRVPVEHTLDA 167
>d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 257 Back     information, alignment and structure
>d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} Length = 240 Back     information, alignment and structure
>d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 202 Back     information, alignment and structure
>d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Length = 232 Back     information, alignment and structure
>d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213 Back     information, alignment and structure
>d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 222 Back     information, alignment and structure
>d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 220 Back     information, alignment and structure
>d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 219 Back     information, alignment and structure
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Length = 229 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query528
d1q2la4240 Protease III {Escherichia coli [TaxId: 562]} 100.0
d1hr6a1220 Mitochondrial processing peptidase (MPP) alpha cha 100.0
d1hr6b1222 Mitochondrial processing peptidase (MPP) beta chai 100.0
d1ppja1232 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 100.0
d1ppjb1219 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 100.0
d3cx5a1213 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 100.0
d2fgea4257 Presequence protease 1, PREP1 {Thale cress (Arabid 100.0
d3cx5b1202 Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc 99.97
d1q2la1229 Protease III {Escherichia coli [TaxId: 562]} 99.87
d1q2la3240 Protease III {Escherichia coli [TaxId: 562]} 99.82
d1ppjb2204 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 99.57
d1hr6b2217 Mitochondrial processing peptidase (MPP) beta chai 99.55
d1hr6a2237 Mitochondrial processing peptidase (MPP) alpha cha 99.4
d1ppja2209 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 99.32
d3cx5a2218 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 99.09
d2fgea2196 Presequence protease 1, PREP1 {Thale cress (Arabid 99.06
d2fgea1258 Presequence protease 1, PREP1 {Thale cress (Arabid 98.75
d1ppjb2204 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 98.42
d1ppja2209 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 98.12
d1hr6a2237 Mitochondrial processing peptidase (MPP) alpha cha 98.11
d1hr6b2217 Mitochondrial processing peptidase (MPP) beta chai 98.09
d1q2la2228 Protease III {Escherichia coli [TaxId: 562]} 98.05
d2fgea3268 Presequence protease 1, PREP1 {Thale cress (Arabid 97.69
d3cx5a2218 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 97.61
d1q2la2228 Protease III {Escherichia coli [TaxId: 562]} 96.83
d2fgea2196 Presequence protease 1, PREP1 {Thale cress (Arabid 96.79
d3cx5b2150 Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc 96.54
d2fgea3268 Presequence protease 1, PREP1 {Thale cress (Arabid 90.84
d1hr6b1222 Mitochondrial processing peptidase (MPP) beta chai 81.63
d3cx5a1213 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 80.92
d1hr6a1220 Mitochondrial processing peptidase (MPP) alpha cha 80.32
>d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: LuxS/MPP-like metallohydrolase
superfamily: LuxS/MPP-like metallohydrolase
family: MPP-like
domain: Protease III
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.7e-41  Score=321.72  Aligned_cols=232  Identities=34%  Similarity=0.519  Sum_probs=216.3

Q ss_pred             cCCCCCCCCCCCCcceeEEecCCCEEEEEecCCcccccccccccccccchhhhhcccCCCCCCCCCCCCCCCCccchhhh
Q psy12151         64 RLPLPVKGLCDRYKYSVIQLKNGLTALLVSDVENLITLDENVTADDKMSMEQESEESGNESGDETASSVDSQGMEVDEFE  143 (528)
Q Consensus        64 ~~~~~~~~~~d~~~~~~~~L~NGl~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (528)
                      ...++.|+..|.++|++++|+|||+|++++++..|                                             
T Consensus         7 ~~~~~~k~~~d~~~~~~~~L~NGl~V~~~~~~~~~---------------------------------------------   41 (240)
T d1q2la4           7 IQETIRKSDKDNRQYQAIRLDNGMVVLLVSDPQAV---------------------------------------------   41 (240)
T ss_dssp             CCSCCCCCTTCCCEEEEEEETTSCEEEEEECTTCS---------------------------------------------
T ss_pred             ccccCCCCCCCCcceEEEEcCCCCEEEEEECCCCC---------------------------------------------
Confidence            34677899999999999999999999999988763                                             


Q ss_pred             hhhhhhhhccCccceEEEEEEecccCCcCC-CCCChHHHHHHHhccCCCCCCChhHHHHHHHhcCCccceEecCCeEEEE
Q psy12151        144 EADRSKQEKKSDEKLAALSLTIGVGSFCDG-HIPGLAHFLEHMVFMGSEKYPEENDFDAFLSTRGGSSNASTEYETTTFY  222 (528)
Q Consensus       144 ~~~~~~~~~~~~~~~v~i~l~v~~Gs~~e~-~~~Glahllehllf~Gt~~~~~~~~l~~~L~~~G~~~na~t~~d~t~~~  222 (528)
                                    .+.+++++++|+++|+ +..|+||+++||+++|+.+++....+.++++.+|+.+|++|+.+++.|+
T Consensus        42 --------------~v~~~l~~~~Gs~~e~~~~~Gla~ll~~ll~~gt~~~~~~~~~~~~~~~~g~~~na~~~~~~t~~~  107 (240)
T d1q2la4          42 --------------KSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSHNASTAPYRTAFY  107 (240)
T ss_dssp             --------------SEEEEEEESCCGGGCCGGGTTHHHHHHHHTTSCBSSSCSTTHHHHHHHTTTCEEEEEECSSCEEEE
T ss_pred             --------------EEEEEEEEeCCccccccchHHHHHHHHHhhhcccCcchhhHHHHHHHHHcCCeecccccccceeee
Confidence                          9999999999999999 9999999999999999999877679999999999999999999999999


Q ss_pred             EEcChhhHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHcCCCCCCCCCCCCChhhhcccc
Q psy12151        223 FDVPEPHLKKSMDIFSNFFISPLLKRDSIASEMDIVDSEFQSSILNDTCRLEQLLATACTKENPAGKFVWGNLETLKNTV  302 (528)
Q Consensus       223 ~~~~~~~l~~~L~lla~~l~~P~f~~~~~~~ek~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~G~~e~L~~it  302 (528)
                      +++++++++.+|++|++++.+|.|++++|++++..+.++++...++|...+.+.+..++|++||++++..|+.++|..+.
T Consensus       108 ~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~k~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l~~~~  187 (240)
T d1q2la4         108 LEVENDALPGAVDRLADAIAEPLLDKKYAERERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKP  187 (240)
T ss_dssp             EEECGGGHHHHHHHHHHHHHCBCCCSTTHHHHHHHHHHHHHHHTTSHHHHHHHHHHHSSCTTSGGGSCCSCCHHHHSCBT
T ss_pred             ccccccccccchhhhhHHhcCCcchhhhhhhhhhhhhhhhhhhcchhHHHHHHHHHHHhcccCcccccCCCCchhHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998664


Q ss_pred             cchHHHHHHHHHHHhhcCCCCcEEEEEcCCCHHHHHHHHHHHhcCCCCCCCCC
Q psy12151        303 DENELYAALRNLQKTHYVANHMTLALQARLDLPTLEAWVVEHFSGIPSNESPK  355 (528)
Q Consensus       303 ~~~~i~e~L~~f~~~~y~~~~~~LvivGdi~~d~l~~lv~~~f~~ip~~~~~~  355 (528)
                       .+.+.++|++||++||+|+||+|+|+|++++++++++|+++||+||++..+.
T Consensus       188 -~~~~~~~l~~f~~~~y~p~n~~l~i~G~~~~~~l~~~i~~~fg~lp~~~~~~  239 (240)
T d1q2la4         188 -GNPVQQALKDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKK  239 (240)
T ss_dssp             -TBCHHHHHHHHHHHHCCTTTCEEEEEESSCHHHHHHHHHHTGGGSCCCCCCC
T ss_pred             -hhhhHHHHHHHHHHhCCcCcEEEEEEcCCCHHHHHHHHHHHhcCCCCCCCCC
Confidence             1111799999999999999999999999999999999999999999876544
>d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d3cx5b2 d.185.1.1 (B:219-368) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure