Psyllid ID: psy12266

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------
Protein Sequence
MVPKLFSTGVLQFCKLVARGELFTPKSHFSLACSMAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNEYKMVHK
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHccccccccccHHHHHHHccccHHHHHcccccccccccEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEc
Secondary Structure Prediction (SSPRO)
ccHHHHHccccEEEEEEEcccHHcHHHHccHHHHHHccHHHHHHHcccccccccccEEEEEEccccccHHHHHccccccccHHHHHHHHHHHHHHHHHcccEEEEEc
Coil and Loop (DISEMBL)
mvpklfstGVLQFCKLVargelftpkshFSLACSMAKSKFEYVREFeshdrclpncfivvrvdgkgfhkfteahgfdkpndrsgLWLMSKAAACVIEEFNEYKMVHK
Flexible Loop (DISEMBL)
MVPKLFSTGVLQFCKLVARGELFTPKSHFSLACSMAKSKFEYVREFEshdrclpnCFIVVRVDGKGFHKFteahgfdkpndrsGLWLMSKAAACVIEEFNEYKMVHK
Low Complexity Region (SEG)
MVPKLFSTGVLQFCKLVARGELFTPKSHFSLACSMAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNEYKMVHK
Disordered region (IsUnstruct)
****LFSTGVLQFCKLVARGELFTPKSHFSLACSMAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNEY*****
Disordered Region (DISOPRED)
***KLF*TGVLQFCKLVARGELFTPKSHFSLACSMAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNEYKMVHK
Disordered Region (DISEMBL)
MVPKLFSTGVLQFCKLVARGELFTPKSHFSLACSMAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNEYKMVHK
Disordered Region (DISPRO)
*VPKLFSTGVLQFCKLVARGELFTPKSHFSLACSMAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNEYKMVHK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVPKLFSTGVLQFCKLVARGELFTPKSHFSLACSMAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNEYKMVHK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	107	2.2.26 [Sep-21-2011]
Q9NWX6	298	Probable tRNA(His) guanyl	yes	N/A	0.738	0.265	0.518	2e-19
Q9CY52	298	Probable tRNA(His) guanyl	yes	N/A	0.663	0.238	0.577	3e-19
Q05B50	298	Probable tRNA(His) guanyl	yes	N/A	0.897	0.322	0.453	5e-19
Q5M965	298	Probable tRNA(His) guanyl	yes	N/A	0.663	0.238	0.563	6e-19
Q9Y7T3	261	tRNA(His) guanylyltransfe	yes	N/A	0.626	0.256	0.582	2e-17
Q9V3N8	286	Probable tRNA(His) guanyl	yes	N/A	0.672	0.251	0.5	1e-16
Q6FPX3	237	tRNA(His) guanylyltransfe	yes	N/A	0.607	0.274	0.553	3e-16
Q6CW75	237	tRNA(His) guanylyltransfe	yes	N/A	0.626	0.282	0.552	1e-15
Q75DJ3	237	tRNA(His) guanylyltransfe	yes	N/A	0.579	0.261	0.564	2e-15
Q7SDM8	293	tRNA(His) guanylyltransfe	N/A	N/A	0.672	0.245	0.5	2e-15

>sp|Q9NWX6|THG1_HUMAN Probable tRNA(His) guanylyltransferase OS=Homo sapiens GN=THG1L PE=1 SV=2

 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 41/79 (51%), Positives = 55/79 (69%)

Query: 23  FTPKSHFSLACSMAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDR 82
            T + +  L  +MAKSKFEYVR+FE+ D CL +C++VVR+DG+ FH+F E H F KPND 
Sbjct: 18  ITLRRYLRLGATMAKSKFEYVRDFEADDTCLAHCWVVVRLDGRNFHRFAEKHNFAKPNDS 77

Query: 83  SGLWLMSKAAACVIEEFNE 101
             L LM+K A  V+EE  +
Sbjct: 78  RALQLMTKCAQTVMEELED 96

Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage. This step is essential for proper recognition of the tRNA and for the fidelity of protein synthesis.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 7EC: 9

>sp|Q9CY52|THG1_MOUSE Probable tRNA(His) guanylyltransferase OS=Mus musculus GN=Thg1l PE=1 SV=1

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 51/71 (71%)

Query: 31  LACSMAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSK 90
           L  +MAKSKFEYVR FE  D CLP+C++VVR+DG+ FH+F E H F KPND   L LM+K
Sbjct: 26  LGVAMAKSKFEYVRNFEVQDTCLPHCWVVVRLDGRNFHRFAEEHNFAKPNDSRALHLMTK 85

Query: 91  AAACVIEEFNE 101
            A  V+EE  +
Sbjct: 86  CAQTVMEELED 96

Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage. This step is essential for proper recognition of the tRNA and for the fidelity of protein synthesis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 7

EC: 9

>sp|Q05B50|THG1_BOVIN Probable tRNA(His) guanylyltransferase OS=Bos taurus GN=THG1L PE=2 SV=1

 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 63/97 (64%), Gaps = 1/97 (1%)

Query: 5   LFSTGVLQFCKLVARGELFTPKSHFSLACSMAKSKFEYVREFESHDRCLPNCFIVVRVDG 64
           +++ G L+    +A   + T +    L  +MAKSKFEYVR+FE+ D CLP+C++VVR+DG
Sbjct: 1   MWAAGALKVRDCLAATSV-TLRRCLKLGATMAKSKFEYVRDFEADDTCLPHCWVVVRLDG 59

Query: 65  KGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNE 101
           + FH+F E H F KPND   L LM+K A  V+ E  +
Sbjct: 60  RNFHRFAEKHSFIKPNDSRALHLMTKCAQTVMNELED 96

Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage. This step is essential for proper recognition of the tRNA and for the fidelity of protein synthesis.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 7

EC: 9

>sp|Q5M965|THG1_RAT Probable tRNA(His) guanylyltransferase OS=Rattus norvegicus GN=Thg1l PE=2 SV=1

 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 52/71 (73%)

Query: 31  LACSMAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSK 90
           L  +MAKSKFEYVR+FE  D CLP+C++VVR+DG+ FH+F E H F KPND   L LM+K
Sbjct: 26  LGVAMAKSKFEYVRDFEVDDTCLPHCWVVVRLDGRNFHRFAEKHNFAKPNDSRALHLMTK 85

Query: 91  AAACVIEEFNE 101
            A  V++E  +
Sbjct: 86  CAQTVMQELED 96

Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage. This step is essential for proper recognition of the tRNA and for the fidelity of protein synthesis.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 7

EC: 9

>sp|Q9Y7T3|THG1_SCHPO tRNA(His) guanylyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thg1 PE=3 SV=1

 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 51/67 (76%)

Query: 35  MAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAAC 94
           MAKS+FEYV+++E  DR LP  +IV+R+DGKGFHKFT+ H F+KPND   L LM+ AA  
Sbjct: 1   MAKSRFEYVKQYERLDRLLPETYIVIRIDGKGFHKFTKKHDFEKPNDLRCLNLMNAAARV 60

Query: 95  VIEEFNE 101
           V+ EF +
Sbjct: 61  VMSEFTD 67

Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 7

EC: 9

>sp|Q9V3N8|THG1_DROME Probable tRNA(His) guanylyltransferase OS=Drosophila melanogaster GN=l(2)35Bc PE=2 SV=1

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 52/72 (72%)

Query: 35  MAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAAC 94
           MA S+FEYV+ FE  D  LPN +IV+R+DGK FHKF++ H F+KPND + L +M+ AA  
Sbjct: 1   MACSRFEYVKSFEQDDSILPNVWIVIRIDGKKFHKFSKTHDFEKPNDENALNVMNAAATA 60

Query: 95  VIEEFNEYKMVH 106
           V++EF +  + +
Sbjct: 61  VMQEFRDIVLAY 72

Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 7

EC: 9

>sp|Q6FPX3|THG1_CANGA tRNA(His) guanylyltransferase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=THG1 PE=3 SV=1

 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 36/65 (55%), Positives = 49/65 (75%)

Query: 35 MAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAAC 94
          MAKSK+EYV++FESHD  LP C+IVVR+DGK FH+F++ + F KPND   L LM+  A  
Sbjct: 1  MAKSKYEYVKQFESHDTLLPQCYIVVRIDGKKFHEFSKYYDFKKPNDERALKLMNACAKN 60

Query: 95 VIEEF 99
          V+ ++
Sbjct: 61 VVLQY 65

Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.

Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 7

EC: 9

>sp|Q6CW75|THG1_KLULA tRNA(His) guanylyltransferase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=THG1 PE=3 SV=1

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 37/67 (55%), Positives = 49/67 (73%)

Query: 35  MAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAAC 94
           MAKS+FEYVR+FE HD  LP+ +IVVRVDGK FH+F++ + F KPND   L LM+ AA  
Sbjct: 1   MAKSRFEYVRQFEVHDALLPDTYIVVRVDGKKFHEFSKYYNFAKPNDERALKLMNAAAKN 60

Query: 95  VIEEFNE 101
           V  ++ +
Sbjct: 61  VFMQYKQ 67

Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 7

EC: 9

>sp|Q75DJ3|THG1_ASHGO tRNA(His) guanylyltransferase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=THG1 PE=3 SV=1

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 47/62 (75%)

Query: 35 MAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAAC 94
          MAKS+FEYVRE+E HD  LP  +IVVR+DGK FH+F++ + F+KPND   L LM+ +A  
Sbjct: 1  MAKSRFEYVREYEVHDTLLPETYIVVRIDGKHFHEFSQHYSFEKPNDERALKLMNASAKN 60

Query: 95 VI 96
          V+
Sbjct: 61 VV 62

Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 7

EC: 9

>sp|Q7SDM8|THG1_NEUCR tRNA(His) guanylyltransferase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=thg-1 PE=3 SV=1

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 50/72 (69%)

Query: 35  MAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAAC 94
           MA SKFEYV++FE  D  LPN +IVVR+DG+GF KF+  + F+KPND+  L LM+ AA  
Sbjct: 1   MANSKFEYVKQFEQPDSLLPNTWIVVRLDGRGFTKFSTKYAFEKPNDKRALDLMNAAARS 60

Query: 95  VIEEFNEYKMVH 106
           V+ E  +  + +
Sbjct: 61  VMSELPDITIAY 72

Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 7

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	107
350414979	357	PREDICTED: probable tRNA(His) guanylyltr	0.887	0.266	0.531	1e-20
346472171	301	hypothetical protein [Amblyomma maculatu	0.626	0.222	0.671	2e-20
340714774	329	PREDICTED: probable tRNA(His) guanylyltr	0.887	0.288	0.531	2e-20
328721876	302	PREDICTED: probable tRNA(His) guanylyltr	0.728	0.258	0.564	3e-20
328791883	329	PREDICTED: probable tRNA(His) guanylyltr	0.887	0.288	0.531	4e-20
241096199	258	conserved hypothetical protein [Ixodes s	0.626	0.259	0.656	6e-20
321479120	256	hypothetical protein DAPPUDRAFT_39947 [D	0.626	0.261	0.686	7e-20
383860706	327	PREDICTED: probable tRNA(His) guanylyltr	0.887	0.290	0.520	1e-19
340714772	328	PREDICTED: probable tRNA(His) guanylyltr	0.626	0.204	0.656	2e-19
115921197	265	PREDICTED: probable tRNA(His) guanylyltr	0.672	0.271	0.597	2e-19

>gi|350414979|ref|XP_003490493.1| PREDICTED: probable tRNA(His) guanylyltransferase-like [Bombus impatiens]

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/96 (53%), Positives = 64/96 (66%), Gaps = 1/96 (1%)

Query: 6   FSTGVLQFCKLVARGELFTPKSHFSLACSMAKSKFEYVREFESHDRCLPNCFIVVRVDGK 65
           F T    F K+++  +      H SL   MAKSKFEYV+EFE  D CLPNC+IVVR+DG+
Sbjct: 4   FLTTGSNFLKIISLVKQVVNSRHISLT-RMAKSKFEYVKEFERDDSCLPNCWIVVRIDGR 62

Query: 66  GFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNE 101
            F KF EAH F KPND + L LM++AA  V+E+F E
Sbjct: 63  NFSKFCEAHQFTKPNDVAALQLMNRAAITVMEDFKE 98

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|346472171|gb|AEO35930.1| hypothetical protein [Amblyomma maculatum]

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 56/67 (83%)

Query: 35  MAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAAC 94
           MAKSKFEYVR+FE+ D+CLPNC+IV RVDGK FHKF++ HGF+KPND+  L LM++ A  
Sbjct: 41  MAKSKFEYVRQFETDDKCLPNCWIVTRVDGKAFHKFSDMHGFEKPNDKRALDLMTRCAER 100

Query: 95  VIEEFNE 101
           V+EEF E
Sbjct: 101 VMEEFGE 107

Source: Amblyomma maculatum

Species: Amblyomma maculatum

Genus: Amblyomma

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340714774|ref|XP_003395899.1| PREDICTED: probable tRNA(His) guanylyltransferase-like isoform 2 [Bombus terrestris]

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/96 (53%), Positives = 64/96 (66%), Gaps = 1/96 (1%)

Query: 6   FSTGVLQFCKLVARGELFTPKSHFSLACSMAKSKFEYVREFESHDRCLPNCFIVVRVDGK 65
           F T    F K+++  +      H SL   MAKSKFEYV+EFE  D CLPNC+IVVR+DG+
Sbjct: 4   FLTTGSNFLKIISLVKQVVNSRHISLM-RMAKSKFEYVKEFERDDSCLPNCWIVVRIDGR 62

Query: 66  GFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNE 101
            F KF EAH F KPND + L LM++AA  V+E+F E
Sbjct: 63  NFSKFCEAHQFTKPNDVAALQLMNRAAITVMEDFKE 98

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328721876|ref|XP_001951780.2| PREDICTED: probable tRNA(His) guanylyltransferase-like isoform 1 [Acyrthosiphon pisum]

 Score =  102 bits (254), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 44/78 (56%), Positives = 61/78 (78%)

Query: 29  FSLACSMAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLM 88
           FS + +MAKSK+EYVR FE  DRCL NC+IVVR+DG+ FH+FT +H F+KPND+  L LM
Sbjct: 25  FSTSKAMAKSKYEYVRTFEFEDRCLQNCWIVVRLDGRSFHRFTSSHKFEKPNDKRALELM 84

Query: 89  SKAAACVIEEFNEYKMVH 106
           +++AA V+EEF +  + +
Sbjct: 85  NRSAAAVMEEFRDVSLAY 102

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328791883|ref|XP_003251648.1| PREDICTED: probable tRNA(His) guanylyltransferase-like [Apis mellifera]

 Score =  102 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 51/96 (53%), Positives = 64/96 (66%), Gaps = 1/96 (1%)

Query: 6   FSTGVLQFCKLVARGELFTPKSHFSLACSMAKSKFEYVREFESHDRCLPNCFIVVRVDGK 65
           F T    F K+++  +      H SL   MAKSKFEYV+EFE  D CLPNC+IVVR+DG+
Sbjct: 4   FLTTGSNFLKIISLVKQVVNSRHISLM-RMAKSKFEYVKEFERDDCCLPNCWIVVRIDGR 62

Query: 66  GFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNE 101
            F KF EAH F KPND + L LM++AA  V+E+F E
Sbjct: 63  NFSKFCEAHQFTKPNDVAALQLMNRAAITVMEDFKE 98

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|241096199|ref|XP_002409551.1| conserved hypothetical protein [Ixodes scapularis] gi|215492776|gb|EEC02417.1| conserved hypothetical protein [Ixodes scapularis]

 Score =  101 bits (251), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 56/67 (83%)

Query: 35  MAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAAC 94
           MAKSKFEYVR+FE  DRCLPNC++VVRVDGK FH+F++AH F+KPND+  L LMS+ A  
Sbjct: 1   MAKSKFEYVRQFEQDDRCLPNCWLVVRVDGKAFHRFSDAHNFEKPNDKRALDLMSRCAER 60

Query: 95  VIEEFNE 101
           V++EF +
Sbjct: 61  VMDEFKD 67

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321479120|gb|EFX90076.1| hypothetical protein DAPPUDRAFT_39947 [Daphnia pulex]

 Score =  101 bits (251), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 54/67 (80%)

Query: 35  MAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAAC 94
           MAKSKFEYVR FE+ DRCLPN +IVVRVDGKGFHKF+  H ++KPND   L LM+KAA  
Sbjct: 1   MAKSKFEYVRLFETEDRCLPNSWIVVRVDGKGFHKFSTEHDYEKPNDMRALSLMNKAATS 60

Query: 95  VIEEFNE 101
           V+EEF +
Sbjct: 61  VMEEFKD 67

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383860706|ref|XP_003705830.1| PREDICTED: probable tRNA(His) guanylyltransferase-like [Megachile rotundata]

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/96 (52%), Positives = 64/96 (66%), Gaps = 1/96 (1%)

Query: 6   FSTGVLQFCKLVARGELFTPKSHFSLACSMAKSKFEYVREFESHDRCLPNCFIVVRVDGK 65
           F T    F K+++  +      H SL   MAKSKFEYV+EFE  D CLPNC+IVVR+DG+
Sbjct: 3   FLTTGSNFLKIISLVKQVVNSRHISLT-RMAKSKFEYVKEFERDDCCLPNCWIVVRIDGR 61

Query: 66  GFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNE 101
            F KF +AH F KPND + L LM++AA  V+E+F E
Sbjct: 62  NFSKFCDAHQFTKPNDVAALQLMNRAAITVMEDFKE 97

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340714772|ref|XP_003395898.1| PREDICTED: probable tRNA(His) guanylyltransferase-like isoform 1 [Bombus terrestris]

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/67 (65%), Positives = 53/67 (79%)

Query: 35  MAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAAC 94
           MAKSKFEYV+EFE  D CLPNC+IVVR+DG+ F KF EAH F KPND + L LM++AA  
Sbjct: 3   MAKSKFEYVKEFERDDSCLPNCWIVVRIDGRNFSKFCEAHQFTKPNDVAALQLMNRAAIT 62

Query: 95  VIEEFNE 101
           V+E+F E
Sbjct: 63  VMEDFKE 69

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|115921197|ref|XP_792143.2| PREDICTED: probable tRNA(His) guanylyltransferase-like [Strongylocentrotus purpuratus]

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/72 (59%), Positives = 57/72 (79%)

Query: 35  MAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAAC 94
           MAKSKFEYVR+FE+ D+ LPN +IV+R+DGK FHKF++ HGF+KPND  GL LMS+AA  
Sbjct: 1   MAKSKFEYVRQFETQDKLLPNSWIVIRIDGKNFHKFSDIHGFEKPNDLRGLSLMSEAATS 60

Query: 95  VIEEFNEYKMVH 106
           V+ EF +  + +
Sbjct: 61  VMTEFKDIILAY 72

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	107
UNIPROTKB|Q5ZIR4	269	THG1L "Uncharacterized protein	0.672	0.267	0.569	5.1e-19
UNIPROTKB|Q05B50	298	THG1L "Probable tRNA(His) guan	0.897	0.322	0.453	5.1e-19
UNIPROTKB|E5RIQ8	124	THG1L "Probable tRNA(His) guan	0.822	0.709	0.478	5.1e-19
UNIPROTKB|Q9NWX6	298	THG1L "Probable tRNA(His) guan	0.822	0.295	0.478	5.1e-19
MGI|MGI:1913878	298	Thg1l "tRNA-histidine guanylyl	0.663	0.238	0.577	8.3e-19
RGD|1359513	298	Thg1l "tRNA-histidine guanylyl	0.663	0.238	0.563	1.4e-18
UNIPROTKB|F1RQF4	292	THG1L "Uncharacterized protein	0.728	0.267	0.525	1.7e-18
ZFIN|ZDB-GENE-041114-170	269	thg1l "tRNA-histidine guanylyl	0.672	0.267	0.555	4.6e-18
UNIPROTKB|E2RA61	298	THG1L "Uncharacterized protein	0.663	0.238	0.549	7.5e-18
POMBASE|SPCC63.07	261	SPCC63.07 "tRNA guanylyltransf	0.672	0.275	0.541	2.5e-17

UNIPROTKB|Q5ZIR4 THG1L "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 41/72 (56%), Positives = 53/72 (73%)

Query:    35 MAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAAC 94
             MAKSKFEYVR+FE+ D CLPNC+IVVR+DG+ FH+F E H F KPND   L LM+K A  
Sbjct:     1 MAKSKFEYVRDFETDDTCLPNCWIVVRLDGRNFHRFAEQHEFKKPNDDRALHLMTKCAQT 60

Query:    95 VIEEFNEYKMVH 106
             V++E  +  + +
Sbjct:    61 VMQELEDIAIAY 72

GO:0006400 "tRNA modification" evidence=IEA

GO:0008193 "tRNA guanylyltransferase activity" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0051289 "protein homotetramerization" evidence=IEA

UNIPROTKB|Q05B50 THG1L "Probable tRNA(His) guanylyltransferase" [Bos taurus (taxid:9913)]

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 44/97 (45%), Positives = 63/97 (64%)

Query:     5 LFSTGVLQFCKLVARGELFTPKSHFSLACSMAKSKFEYVREFESHDRCLPNCFIVVRVDG 64
             +++ G L+    +A   + T +    L  +MAKSKFEYVR+FE+ D CLP+C++VVR+DG
Sbjct:     1 MWAAGALKVRDCLAATSV-TLRRCLKLGATMAKSKFEYVRDFEADDTCLPHCWVVVRLDG 59

Query:    65 KGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNE 101
             + FH+F E H F KPND   L LM+K A  V+ E  +
Sbjct:    60 RNFHRFAEKHSFIKPNDSRALHLMTKCAQTVMNELED 96

GO:0008193 "tRNA guanylyltransferase activity" evidence=ISS

GO:0008033 "tRNA processing" evidence=ISS

GO:0006400 "tRNA modification" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0051289 "protein homotetramerization" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

UNIPROTKB|E5RIQ8 THG1L "Probable tRNA(His) guanylyltransferase" [Homo sapiens (taxid:9606)]

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 44/92 (47%), Positives = 59/92 (64%)

Query:    14 CKLVARGEL----FTPKSHFSLACSMAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHK 69
             CK+     L     T + +  L  +MAKSKFEYVR+FE+ D CL +C++VVR+DG+ FH+
Sbjct:     5 CKVKVHDSLATISITLRRYLRLGATMAKSKFEYVRDFEADDTCLAHCWVVVRLDGRNFHR 64

Query:    70 FTEAHGFDKPNDRSGLWLMSKAAACVIEEFNE 101
             F E H F KPND   L LM+K A  V+EE  +
Sbjct:    65 FAEKHNFAKPNDSRALQLMTKCAQTVMEELED 96

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0006400 "tRNA modification" evidence=IEA

GO:0008193 "tRNA guanylyltransferase activity" evidence=IEA

UNIPROTKB|Q9NWX6 THG1L "Probable tRNA(His) guanylyltransferase" [Homo sapiens (taxid:9606)]

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 44/92 (47%), Positives = 59/92 (64%)

Query:    14 CKLVARGEL----FTPKSHFSLACSMAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHK 69
             CK+     L     T + +  L  +MAKSKFEYVR+FE+ D CL +C++VVR+DG+ FH+
Sbjct:     5 CKVKVHDSLATISITLRRYLRLGATMAKSKFEYVRDFEADDTCLAHCWVVVRLDGRNFHR 64

Query:    70 FTEAHGFDKPNDRSGLWLMSKAAACVIEEFNE 101
             F E H F KPND   L LM+K A  V+EE  +
Sbjct:    65 FAEKHNFAKPNDSRALQLMTKCAQTVMEELED 96

GO:0005737 "cytoplasm" evidence=ISS

GO:0006400 "tRNA modification" evidence=ISS

GO:0008193 "tRNA guanylyltransferase activity" evidence=ISS;IDA

GO:0008033 "tRNA processing" evidence=IDA

GO:0051289 "protein homotetramerization" evidence=IDA;IPI

GO:0005739 "mitochondrion" evidence=IDA

GO:0005525 "GTP binding" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0000049 "tRNA binding" evidence=TAS

GO:0042802 "identical protein binding" evidence=IPI

MGI|MGI:1913878 Thg1l "tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 41/71 (57%), Positives = 51/71 (71%)

Query:    31 LACSMAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSK 90
             L  +MAKSKFEYVR FE  D CLP+C++VVR+DG+ FH+F E H F KPND   L LM+K
Sbjct:    26 LGVAMAKSKFEYVRNFEVQDTCLPHCWVVVRLDGRNFHRFAEEHNFAKPNDSRALHLMTK 85

Query:    91 AAACVIEEFNE 101
              A  V+EE  +
Sbjct:    86 CAQTVMEELED 96

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=ISO

GO:0005524 "ATP binding" evidence=ISO

GO:0005525 "GTP binding" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0006400 "tRNA modification" evidence=IEA

GO:0008033 "tRNA processing" evidence=ISO

GO:0008193 "tRNA guanylyltransferase activity" evidence=ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0016779 "nucleotidyltransferase activity" evidence=IEA

GO:0042802 "identical protein binding" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0051289 "protein homotetramerization" evidence=ISO

RGD|1359513 Thg1l "tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 40/71 (56%), Positives = 52/71 (73%)

Query:    31 LACSMAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSK 90
             L  +MAKSKFEYVR+FE  D CLP+C++VVR+DG+ FH+F E H F KPND   L LM+K
Sbjct:    26 LGVAMAKSKFEYVRDFEVDDTCLPHCWVVVRLDGRNFHRFAEKHNFAKPNDSRALHLMTK 85

Query:    91 AAACVIEEFNE 101
              A  V++E  +
Sbjct:    86 CAQTVMQELED 96

GO:0000287 "magnesium ion binding" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=IEA;ISO

GO:0005525 "GTP binding" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=ISS

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0006400 "tRNA modification" evidence=ISS

GO:0008033 "tRNA processing" evidence=ISO;ISS

GO:0008193 "tRNA guanylyltransferase activity" evidence=ISO;ISS

GO:0042802 "identical protein binding" evidence=IEA;ISO

GO:0051289 "protein homotetramerization" evidence=IEA;ISO

UNIPROTKB|F1RQF4 THG1L "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 41/78 (52%), Positives = 54/78 (69%)

Query:    24 TPKSHFSLACSMAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRS 83
             T + +  L   MAKSKFEYVR+FE+ D CL +C++VVR+DG+ FH+F E H F KPND  
Sbjct:    19 TLRRYLKLGAIMAKSKFEYVRDFEADDTCLAHCWVVVRLDGRNFHRFAEKHHFAKPNDSR 78

Query:    84 GLWLMSKAAACVIEEFNE 101
              L LM+K A  V+EE  +
Sbjct:    79 ALHLMTKCAQTVMEELED 96

GO:0051289 "protein homotetramerization" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0008193 "tRNA guanylyltransferase activity" evidence=IEA

GO:0006400 "tRNA modification" evidence=IEA

ZFIN|ZDB-GENE-041114-170 thg1l "tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 40/72 (55%), Positives = 52/72 (72%)

Query:    35 MAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAAC 94
             MAKSKFEYVR FE  D CL NC+IVVR+DG+  HKF++ H F KPND   L LMS++A  
Sbjct:     1 MAKSKFEYVRNFELDDTCLRNCYIVVRLDGRNLHKFSDQHNFTKPNDDRALGLMSRSACS 60

Query:    95 VIEEFNEYKMVH 106
             V+EE ++  + +
Sbjct:    61 VMEELDDITIAY 72

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0008193 "tRNA guanylyltransferase activity" evidence=IEA

GO:0006400 "tRNA modification" evidence=IEA

UNIPROTKB|E2RA61 THG1L "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
 Identities = 39/71 (54%), Positives = 51/71 (71%)

Query:    31 LACSMAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSK 90
             L  +MAKSKFEYVR FE+ D CL +C++VVR+DG+ FH+F E H F KPND   L LM+K
Sbjct:    26 LGATMAKSKFEYVRNFEADDTCLAHCWVVVRLDGRNFHRFAEKHNFAKPNDSRALHLMTK 85

Query:    91 AAACVIEEFNE 101
              A  V++E  +
Sbjct:    86 CAQTVMKELED 96

GO:0051289 "protein homotetramerization" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0008193 "tRNA guanylyltransferase activity" evidence=IEA

GO:0006400 "tRNA modification" evidence=IEA

POMBASE|SPCC63.07 SPCC63.07 "tRNA guanylyltransferase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 39/72 (54%), Positives = 53/72 (73%)

Query:    35 MAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAAC 94
             MAKS+FEYV+++E  DR LP  +IV+R+DGKGFHKFT+ H F+KPND   L LM+ AA  
Sbjct:     1 MAKSRFEYVKQYERLDRLLPETYIVIRIDGKGFHKFTKKHDFEKPNDLRCLNLMNAAARV 60

Query:    95 VIEEFNEYKMVH 106
             V+ EF +  + +
Sbjct:    61 VMSEFTDIVLAY 72

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=ISO;ISS

GO:0005829 "cytosol" evidence=IDA

GO:0006400 "tRNA modification" evidence=ISO;ISS

GO:0008033 "tRNA processing" evidence=ISS

GO:0008193 "tRNA guanylyltransferase activity" evidence=ISO;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q75DJ3	THG1_ASHGO	2, ., 7, ., 7, ., 7, 9	0.5645	0.5794	0.2616	yes	N/A
Q9Y7T3	THG1_SCHPO	2, ., 7, ., 7, ., 7, 9	0.5820	0.6261	0.2567	yes	N/A
Q9CY52	THG1_MOUSE	2, ., 7, ., 7, ., 7, 9	0.5774	0.6635	0.2382	yes	N/A
P53215	THG1_YEAST	2, ., 7, ., 7, ., 7, 9	0.5230	0.6074	0.2742	yes	N/A
Q9NWX6	THG1_HUMAN	2, ., 7, ., 7, ., 7, 9	0.5189	0.7383	0.2651	yes	N/A
Q6CW75	THG1_KLULA	2, ., 7, ., 7, ., 7, 9	0.5522	0.6261	0.2827	yes	N/A
Q54E29	THG1_DICDI	2, ., 7, ., 7, ., 7, 9	0.5692	0.6074	0.2539	yes	N/A
Q5M965	THG1_RAT	2, ., 7, ., 7, ., 7, 9	0.5633	0.6635	0.2382	yes	N/A
Q6FPX3	THG1_CANGA	2, ., 7, ., 7, ., 7, 9	0.5538	0.6074	0.2742	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.7	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	107
pfam04446	131	pfam04446, Thg1, tRNAHis guanylyltransferase	8e-29
COG4021	249	COG4021, COG4021, Uncharacterized conserved protei	1e-24

>gnl|CDD|203016 pfam04446, Thg1, tRNAHis guanylyltransferase

 Score =  100 bits (251), Expect = 8e-29
 Identities = 39/68 (57%), Positives = 51/68 (75%)

Query: 39  KFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEE 98
           KFEYV++FE  DR LPN  IVVR+DG+GFHKFT+ HGF+KPND   L LM+ AA  ++EE
Sbjct: 1   KFEYVKQFEQDDRLLPNTPIVVRIDGRGFHKFTKKHGFEKPNDERALDLMNAAAKALMEE 60

Query: 99  FNEYKMVH 106
           F +  + +
Sbjct: 61  FPDIVLAY 68

The Thg1 protein from Saccharomyces cerevisiae is responsible for adding a GMP residue to the 5' end of tRNA His. The catalytic domain Thg1 contains a RRM (ferredoxin) fold palm domain, just like the viral RNA-dependent RNA polymerases, reverse transcriptases, family A and B DNA polymerases, adenylyl cyclases, diguanylate cyclases (GGDEF domain) and the predicted polymerase of the CRISPR system. Thg1 possesses an active site with three acidic residues that chelate Mg++ cations. Thg1 catalyzes polymerization similar to the 5'-3' polymerases. Length = 131

>gnl|CDD|226508 COG4021, COG4021, Uncharacterized conserved protein [Function unknown]

 Score = 92.6 bits (230), Expect = 1e-24
 Identities = 33/64 (51%), Positives = 45/64 (70%)

Query: 36 AKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACV 95
          AKSKF YVRE  +HDR LP  +IV+R+DG+GFHKFT+   F+KP D   L LM+  A  +
Sbjct: 1  AKSKFMYVREVYAHDRILPQTYIVLRIDGRGFHKFTKFLDFEKPYDERFLKLMNATAKNL 60

Query: 96 IEEF 99
          + ++
Sbjct: 61 VLKY 64

Length = 249

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	107
PF04446	135	Thg1: tRNAHis guanylyltransferase; InterPro: IPR00	99.97
KOG2721|consensus	260		99.97
COG4021	249	Uncharacterized conserved protein [Function unknow	99.92

>PF04446 Thg1: tRNAHis guanylyltransferase; InterPro: IPR007537 The Thg1 protein from Saccharomyces cerevisiae (Baker's yeast) is responsible for adding a GMP residue to the 5' end of tRNA His []

Probab=99.97  E-value=2.5e-32  Score=199.77  Aligned_cols=68  Identities=53%  Similarity=0.906  Sum_probs=56.4

Q ss_pred             chhhhhhcccCCC--cCCCCeEEEEEcCCCccccccccCCCCCCCHHHHHHHHHHHHHHHHhCCCceeee
Q psy12266         39 KFEYVREFESHDR--CLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNEYKMVH  106 (107)
Q Consensus        39 kyeYVK~fE~~d~--llP~~~IVVRIDGR~FhrFTk~h~FeKPnD~rfl~lM~~aA~~vm~ef~divlA~  106 (107)
                      ||||||.||..+.  ++|++|||||||||+||+||+.|+|+||||+|+++||++||++||++++|+++||
T Consensus         1 k~~~vk~~E~~~~~~l~p~~~ivvRiDG~~F~kft~~~~f~KP~D~r~~~~M~~aa~~l~~~~~~~~~aY   70 (135)
T PF04446_consen    1 KYEYVKDFEQDDDLRLLPNTPIVVRIDGRGFHKFTKRHGFEKPNDERFLKAMNEAAKALMEEFPDIVLAY   70 (135)
T ss_dssp             -SGGGGGG----B----TTSEEEEEEEETTHHHHHHHTT--SS--HHHHHHHHHHHHHHHHHSSSEEEEE
T ss_pred             CccHHHhhccccccccCCCCeEEEEEeCcchhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence            7999999999877  9999999999999999999999999999999999999999999999999999998

; PDB: 3OTE_A 3OTC_A 3OTD_A 3OTB_A.

>KOG2721|consensus

Probab=99.97  E-value=3e-31  Score=211.18  Aligned_cols=66  Identities=48%  Similarity=0.943  Sum_probs=65.5

Q ss_pred             hhhhhcccCCCcCCCCeEEEEEcCCCccccccccCCCCCCCHHHHHHHHHHHHHHHHhCCCceeee
Q psy12266         41 EYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNEYKMVH  106 (107)
Q Consensus        41 eYVK~fE~~d~llP~~~IVVRIDGR~FhrFTk~h~FeKPnD~rfl~lM~~aA~~vm~ef~divlA~  106 (107)
                      ||||+||.+|+++|+||||||||||+|||||+.|+|+||||+++++|||+||..||+||+||++||
T Consensus         1 eYVksFE~~d~~lp~~~iVvRIDGr~FhrFs~~h~FeKPNDe~aLnLMnscA~~Vl~ef~DIv~Ay   66 (260)
T KOG2721|consen    1 EYVKSFEVEDEVLPPCWIVVRIDGRDFHRFSKVHEFEKPNDETALNLMNSCASAVLEEFPDIVFAY   66 (260)
T ss_pred             CchhhhhcccccccceEEEEEEcCcchhhhhhhhcccCCChHHHHHHHHHHHHHHHHhccceEEEe
Confidence            799999999999999999999999999999999999999999999999999999999999999998

>COG4021 Uncharacterized conserved protein [Function unknown]

Probab=99.92  E-value=4.5e-26  Score=181.12  Aligned_cols=71  Identities=46%  Similarity=0.687  Sum_probs=67.1

Q ss_pred             hccchhhhhhcccCCCcCCCCeEEEEEcCCCccccccccCCCCCCCHHHHHHHHHHHHHHHH-hCCCceeee
Q psy12266         36 AKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIE-EFNEYKMVH  106 (107)
Q Consensus        36 A~skyeYVK~fE~~d~llP~~~IVVRIDGR~FhrFTk~h~FeKPnD~rfl~lM~~aA~~vm~-ef~divlA~  106 (107)
                      |+|++.|+|++|++++++|+|+||+|||||+||+||+.|+|+||||++|++||++||+.+|. ..+||+|||
T Consensus         1 ~k~~~~~~~evya~~R~~P~t~iVlRiDGr~Fhk~tk~l~FeKPyD~~f~~lM~~tA~~lv~~~~~~i~LaY   72 (249)
T COG4021           1 AKSKFMYVREVYAHDRILPQTYIVLRIDGRGFHKFTKFLDFEKPYDERFLKLMNATAKNLVLKYGLDIILAY   72 (249)
T ss_pred             CCCcchhhhhhhhhhcCCCCceEEEEecChhhhHHHhhcCcCCcchHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence            68999999999999999999999999999999999999999999999999999999996555 557999998

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	107
3otb_A	269	Crystal Structure Of Human Trnahis Guanylyltransfer		4e-19

>pdb|3OTB|A Chain A, Crystal Structure Of Human Trnahis Guanylyltransferase (Thg1) - Dgtp Complex Length = 269

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 50/67 (74%)
Query: 35  MAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAAC 94
           MAKSKFEYVR+FE+ D CL +C++VVR+DG+ FH+F E H F KPND   L LM+K A  
Sbjct: 1   MAKSKFEYVRDFEADDTCLAHCWVVVRLDGRNFHRFAEKHNFAKPNDSRALQLMTKCAQT 60
Query: 95  VIEEFNE 101
           V+EE  +
Sbjct: 61  VMEELED 67

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	107
3otd_A	269	TRNA(His) guanylyltransferase; polymerase-like PAL	2e-32

>3otd_A TRNA(His) guanylyltransferase; polymerase-like PALM domain, catalytic carboxylates; 2.28A {Homo sapiens} PDB: 3otc_A 3otb_A 3ote_A Length = 269

 Score =  113 bits (284), Expect = 2e-32
 Identities = 39/72 (54%), Positives = 52/72 (72%)

Query: 35  MAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAAC 94
           MAKSKFEYVR+FE+ D CL +C++VVR+DG+ FH+F E H F KPND   L LM+K A  
Sbjct: 1   MAKSKFEYVRDFEADDTCLAHCWVVVRLDGRNFHRFAEKHNFAKPNDSRALQLMTKCAQT 60

Query: 95  VIEEFNEYKMVH 106
           V+EE  +  + +
Sbjct: 61  VMEELEDIVIAY 72

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	107
3otd_A	269	TRNA(His) guanylyltransferase; polymerase-like PAL	100.0

>3otd_A TRNA(His) guanylyltransferase; polymerase-like PALM domain, catalytic carboxylates; 2.28A {Homo sapiens} PDB: 3otc_A 3otb_A 3ote_A

Probab=100.00  E-value=9.2e-36  Score=238.05  Aligned_cols=72  Identities=54%  Similarity=1.000  Sum_probs=69.6

Q ss_pred             hhccchhhhhhcccCCCcCCCCeEEEEEcCCCccccccccCCCCCCCHHHHHHHHHHHHHHHHhCCCceeee
Q psy12266         35 MAKSKFEYVREFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNEYKMVH  106 (107)
Q Consensus        35 MA~skyeYVK~fE~~d~llP~~~IVVRIDGR~FhrFTk~h~FeKPnD~rfl~lM~~aA~~vm~ef~divlA~  106 (107)
                      ||||||||||.||.+++|+|++|||||||||+||+||+.|+|+||||+|+++||++||+.||++|+||++||
T Consensus         1 ma~sk~eyvr~fE~~d~llp~~~iVVRiDGr~F~kfs~~~~F~KPnD~r~l~lM~~aA~~lm~~~~~i~~aY   72 (269)
T 3otd_A            1 MAKSKFEYVRDFEADDTCLAHCWVVVRLDGRNFHRFAEKHNFAKPNDSRALQLMTKCAQTVMEELEDIVIAY   72 (269)
T ss_dssp             --CCSSGGGGGGCCCCBCCTTSEEEEEEEETTHHHHHHHTTCCSSCCHHHHHHHHHHHHHHHHHSSSEEEEE
T ss_pred             CCCccchhhhhhccccccCCCCeEEEEEeCCccchhhhhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence            999999999999999999999999999999999999999999999999999999999999999999999998

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00