Psyllid ID: psy12411

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-
Protein Sequence
MKKWNLEDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEVDN
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHcccHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccHccccHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEcccccccccHcccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHccHHHHHHHHHccc
Coil and Loop (DISEMBL)
mkkwnleddsdedendnkdengktaeedidpldAFMQGVHEEMrkvnkpavpttadvkpadsgskpagVVIVTGVVKKSVEKAKGELMEEnqdgleysseeeqEDLTSTAANLASKQKKElskvdhstieylpfrkdfyvevpeiarmtpeeVEKYKEVDN
Flexible Loop (DISEMBL)
mkkwnleddsdedendnkdengktaeedidpLDAFMQGVHEEMRKVNKPAVPTTadvkpadsgskpagvvIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLAskqkkelskvdhstieylpfrkdfyvevPEIArmtpeevekykevdn
Low Complexity Region (SEG)
MKKWnleddsdedendnkdenGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAgvvivtgvvkksvEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEVDN
Disordered region (IsUnstruct)
*******************************************************************GVVIVTGVV**************************************************STIEYLPFRKDFYVEVPEIA***************
Disordered Region (DISOPRED)
*KKWNLE************************LDAFMQGV***************************************************************QEDLTSTAANL***QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEV**
Disordered Region (DISEMBL)
**********************KTAEEDIDPLDAFMQGVHEEMRKVNKPAVP***********SKPAGVVIVTGVVKKSVEKAKGELME*******************TAAN************DHSTIEYLPFRKDFYVEVPEIARMTPEE*********
Disordered Region (DISPRO)
***************************DIDPLDAFMQGVHEEMRKVN***************************************************S*EEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKKWNLEDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEVDN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	161	2.2.26 [Sep-21-2011]
Q4TVV3	1018	Probable ATP-dependent RN	yes	N/A	0.956	0.151	0.459	4e-26
Q62780	1032	Probable ATP-dependent RN	yes	N/A	0.968	0.151	0.440	9e-23
Q569Z5	1032	Probable ATP-dependent RN	yes	N/A	0.968	0.151	0.440	1e-22
Q5R6D8	1032	Probable ATP-dependent RN	yes	N/A	0.968	0.151	0.433	7e-22
Q7L014	1031	Probable ATP-dependent RN	yes	N/A	0.968	0.151	0.433	7e-22
Q8H0U8	1166	DEAD-box ATP-dependent RN	yes	N/A	0.788	0.108	0.357	2e-11
Q0J7Y8	947	DEAD-box ATP-dependent RN	yes	N/A	0.968	0.164	0.313	5e-09
Q9SF41	989	DEAD-box ATP-dependent RN	no	N/A	0.795	0.129	0.350	2e-08
Q84UQ1	1049	DEAD-box ATP-dependent RN	yes	N/A	0.801	0.122	0.314	3e-08
Q6BML1	913	Pre-mRNA-processing ATP-d	yes	N/A	0.354	0.062	0.421	4e-07

>sp|Q4TVV3|DDX46_DANRE Probable ATP-dependent RNA helicase DDX46 OS=Danio rerio GN=ddx46 PE=2 SV=1

 Score =  117 bits (292), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/161 (45%), Positives = 101/161 (62%), Gaps = 7/161 (4%)

Query: 2   KKWNLEDDSDEDENDNKDENGKTAEED-----IDPLDAFMQGVHEEMRKVNKPAVPTTAD 56
           KKW+LEDD +E +   + E  +  EE+     +DPLDA+M+ V EE++K N   +    D
Sbjct: 164 KKWSLEDDDEEQDKAAEAEESERMEEEEVGEEVDPLDAYMEEVKEEVKKFNMGTMKGAND 223

Query: 57  VKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASK 116
            K   S +K   VV    +   +  K KGELME +QD +EYSSEEE+ DL +      +K
Sbjct: 224 KKGGMSVTKVVTVVKTKKMPHAT--KKKGELMENDQDAMEYSSEEEEVDLQTALTGFQTK 281

Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
           Q+K L  VDH  I+Y PFRK+FYVEVPE+ARM+PEEV +Y+
Sbjct: 282 QRKVLEPVDHQKIQYEPFRKNFYVEVPELARMSPEEVSEYR 322

Plays an essential role in splicing, either prior to, or during A complex formation.
Danio rerio (taxid: 7955)
EC: 3EC: .EC: 6EC: .EC: 4EC: .EC: 1EC: 3

>sp|Q62780|DDX46_RAT Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus GN=Ddx46 PE=1 SV=1

 Score =  105 bits (263), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 70/159 (44%), Positives = 101/159 (63%), Gaps = 3/159 (1%)

Query: 2   KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
           KKW+LEDD D++++  +   E  +  +E++DPLDA+M+ V EE++K N  +V   A + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEDEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEK 255

Query: 59  PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
            +         V+ T       +K KGELME +QD +EYSSEEE+ DL +      +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDADKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315

Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
           K L  VDH  IEY PFRK+FYVEVPE+A+M+ EEV  ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354

Plays an essential role in splicing, either prior to, or during A complex formation.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 6

EC: .

EC: 4

EC: .

EC: 1

EC: 3

>sp|Q569Z5|DDX46_MOUSE Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus GN=Ddx46 PE=1 SV=2

 Score =  105 bits (262), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/159 (44%), Positives = 101/159 (63%), Gaps = 3/159 (1%)

Query: 2   KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
           KKW+LEDD D++++  +   E  +  +E++DPLDA+M+ V EE++K N  +V   A + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGTEMEDEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEK 255

Query: 59  PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
            +         V+ T       +K KGELME +QD +EYSSEEE+ DL +      +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDADKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315

Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
           K L  VDH  IEY PFRK+FYVEVPE+A+M+ EEV  ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354

Plays an essential role in splicing, either prior to, or during A complex formation.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 6

EC: .

EC: 4

EC: .

EC: 1

EC: 3

>sp|Q5R6D8|DDX46_PONAB Probable ATP-dependent RNA helicase DDX46 OS=Pongo abelii GN=DDX46 PE=2 SV=1

 Score =  102 bits (255), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)

Query: 2   KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
           KKW+LEDD D++++  +   E  +   E++DPLDA+M+ V EE++K N  +V     + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 255

Query: 59  PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
            +         V+ T       +K KGELME +QD +EYSSEEE+ DL +      +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315

Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
           K L  VDH  IEY PFRK+FYVEVPE+A+M+ EEV  ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354

Plays an essential role in splicing, either prior to, or during A complex formation.

Pongo abelii (taxid: 9601)

EC: 3

EC: .

EC: 6

EC: .

EC: 4

EC: .

EC: 1

EC: 3

>sp|Q7L014|DDX46_HUMAN Probable ATP-dependent RNA helicase DDX46 OS=Homo sapiens GN=DDX46 PE=1 SV=2

 Score =  102 bits (255), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)

Query: 2   KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
           KKW+LEDD D++++  +   E  +   E++DPLDA+M+ V EE++K N  +V     + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 255

Query: 59  PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
            +         V+ T       +K KGELME +QD +EYSSEEE+ DL +      +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315

Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
           K L  VDH  IEY PFRK+FYVEVPE+A+M+ EEV  ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354

Plays an essential role in splicing, either prior to, or during splicing A complex formation.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 6

EC: .

EC: 4

EC: .

EC: 1

EC: 3

>sp|Q8H0U8|RH42_ARATH DEAD-box ATP-dependent RNA helicase 42 OS=Arabidopsis thaliana GN=RH42 PE=1 SV=2

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 74/151 (49%), Gaps = 24/151 (15%)

Query: 21  NGKTAEEDIDPLDAFMQG-VHEEMRKVNKPAVPTTAD-------VKPADSGSKPAGVVIV 72
           +G   EE+IDPLDAFM   V  E+ K    A P   +       +   +SG +P      
Sbjct: 372 DGAVDEEEIDPLDAFMNTMVLPEVEKFCNGAPPPAVNDGTLDSKMNGKESGDRP------ 425

Query: 73  TGVVKKSVEKAKGELMEENQDGLEYS--SEEEQEDLTSTAANLASKQKK----ELSKVDH 126
               KK   KA G +++      +YS    ++   L         + KK    +LS VDH
Sbjct: 426 ----KKGFNKALGRIIQGEDSDSDYSEPKNDDDPSLDEDDEEFMKRVKKTKAEKLSLVDH 481

Query: 127 STIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
           S IEY PFRK+FY+EV +I+RMT EEV  Y+
Sbjct: 482 SKIEYEPFRKNFYIEVKDISRMTQEEVNTYR 512

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 4

EC: .

EC: 1

EC: 3

>sp|Q0J7Y8|RH45_ORYSJ DEAD-box ATP-dependent RNA helicase 45 OS=Oryza sativa subsp. japonica GN=Os08g0154200 PE=3 SV=2

 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 32/188 (17%)

Query: 2   KKWNL------EDDSDEDENDNKDENGKTA----------------EEDIDPLDAFMQG- 38
           KKW L      E+   ED  + +D+ G TA                E++IDPLDAFM   
Sbjct: 83  KKWTLDGEESDEEGYKEDSQNAEDDGGITADLPSEVNDANVAAPMEEDEIDPLDAFMSSM 142

Query: 39  VHEEMRKVNKPAVPTTADVKPADSGSKPAGVV--IVTGVVKKSVEKAKGELMEENQDGLE 96
           V  E+ K+ + AV +   +  ++ G K        V+   KK  +KA G +M+ +    +
Sbjct: 143 VLPEVAKL-ETAVASMESMPASNMGDKNGKSAKDAVSNGDKKGQKKAMGRIMQGDDSDSD 201

Query: 97  YSSEEEQ------EDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTP 150
           Y  +++       ED       +   + ++L+ VDHS IEY PFRK+ Y+EV +I  MT 
Sbjct: 202 YDDDDDDEGGSKDEDDEEFMKRVKKTKVEKLAIVDHSKIEYQPFRKNLYIEVKDITMMTG 261

Query: 151 EEVEKYKE 158
           EEV  Y++
Sbjct: 262 EEVATYRK 269

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 6

EC: .

EC: 4

EC: .

EC: 1

EC: 3

>sp|Q9SF41|RH45_ARATH DEAD-box ATP-dependent RNA helicase 45 OS=Arabidopsis thaliana GN=RH45 PE=2 SV=1

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 23/151 (15%)

Query: 20  ENG--KTAEED-IDPLDAFMQG-VHEEMRKVNKPAVPTTADVK--PADSGSKPAGVVIVT 73
           ENG  + A+ED IDPLDAFM   V  E+ K++   +    D K    ++G +        
Sbjct: 239 ENGGDRAADEDEIDPLDAFMNTMVLPEVEKLSNIVIDGILDFKMNGKETGDQ-------- 290

Query: 74  GVVKKSVEKAK-GELMEENQDGLEYS--SEEEQEDLTSTAANLASKQKK----ELSKVDH 126
              KK   KA  G +++      +YS    ++   L         + KK    +LS VDH
Sbjct: 291 --AKKGFNKAALGRIIQGEDSDSDYSEPKSDDDPSLDEDDEEFMKRVKKTKAEKLSLVDH 348

Query: 127 STIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
           S IEY PFRK+FY+EV +I+RMT + V  Y+
Sbjct: 349 SKIEYEPFRKNFYIEVKDISRMTQDAVNAYR 379

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 4

EC: .

EC: 1

EC: 3

>sp|Q84UQ1|RH42_ORYSJ DEAD-box ATP-dependent RNA helicase 42 OS=Oryza sativa subsp. japonica GN=Os08g0159900 PE=2 SV=1

 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 75/162 (46%), Gaps = 33/162 (20%)

Query: 15  NDNKDENGKTA--EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVV-- 70
           N   + NG  A  E++IDPLDAFM          N   +P  A ++     S PA  V  
Sbjct: 262 NGGDNANGANAMDEDEIDPLDAFM----------NSMVLPEVAKLE-----SMPAANVDD 306

Query: 71  --------IVTGVVKKSVEKAKGELME------ENQDGLEYSSEEEQEDLTSTAANLASK 116
                    VT   KK  +K  G +++      +  D  +     E ED       +   
Sbjct: 307 KNDKSAKDAVTNGDKKGPKKVMGRIIQGEDSDSDYADDEDDEGGSEDEDDEEFMKRVKKT 366

Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
           + ++L+ VDHS I+Y PFRK+FY+EV +I +M  EEV  Y++
Sbjct: 367 KAEKLAIVDHSKIDYQPFRKNFYIEVKDITKMAAEEVAAYRK 408

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 6

EC: .

EC: 4

EC: .

EC: 1

EC: 3

>sp|Q6BML1|PRP5_DEBHA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=PRP5 PE=3 SV=2

 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 38/57 (66%)

Query: 101 EEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
           ++Q+D+ S+  N    ++K+L  VDH+ I+Y PFRKDFY E  EI+++  EEV   +
Sbjct: 242 QKQQDILSSKLNRLQNKQKQLDDVDHNQIQYHPFRKDFYTEPTEISKLPEEEVANLR 298

ATP-dependent RNA helicase involved spliceosome assembly and in nuclear splicing. Catalyzes an ATP-dependent conformational change of U2 snRNP. Bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

EC: 3

EC: .

EC: 6

EC: .

EC: 4

EC: .

EC: 1

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	161
383854537	1035	PREDICTED: probable ATP-dependent RNA he	0.981	0.152	0.592	4e-43
307202910	1034	Probable ATP-dependent RNA helicase DDX4	0.975	0.151	0.584	8e-43
340724160	1030	PREDICTED: LOW QUALITY PROTEIN: probable	0.981	0.153	0.581	7e-42
345482984	1039	PREDICTED: probable ATP-dependent RNA he	0.937	0.145	0.551	1e-41
193683325	985	PREDICTED: probable ATP-dependent RNA he	0.906	0.148	0.576	1e-40
312371167	1161	hypothetical protein AND_22552 [Anophele	0.869	0.120	0.638	1e-40
157138330	1029	DEAD box ATP-dependent RNA helicase [Aed	0.950	0.148	0.626	8e-40
170039965	942	conserved hypothetical protein [Culex qu	0.937	0.160	0.621	2e-39
350408906	1030	PREDICTED: probable ATP-dependent RNA he	0.981	0.153	0.586	3e-39
158289704	968	AGAP010656-PA [Anopheles gambiae str. PE	0.950	0.158	0.593	4e-39

>gi|383854537|ref|XP_003702777.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Megachile rotundata]

 Score =  179 bits (454), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/179 (59%), Positives = 128/179 (71%), Gaps = 21/179 (11%)

Query: 1   MKKWNLEDDSDED----ENDNKD--ENGKTA-------------EEDIDPLDAFMQGVHE 41
           MKKW+LEDDSDE+    +N NK+  E+G+T              EE++DPLDAFM  V E
Sbjct: 178 MKKWSLEDDSDEETPVVQNSNKEVKEDGETKEEVEEVKEETKGDEEEVDPLDAFMAEVQE 237

Query: 42  EMRKVNK--PAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSS 99
           E+RKVNK       +A+      G++  GVVIVTGV K  V+K KGEL+E+NQDGLEYSS
Sbjct: 238 EVRKVNKLDSKSGKSANNGTGTGGTQSGGVVIVTGVAKNKVQKQKGELIEQNQDGLEYSS 297

Query: 100 EEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
           EEE E+L  TAA +A+KQK+EL+KVDH+T EY PFRK FYVEVPEIARMTPEEVE YKE
Sbjct: 298 EEEGENLHETAAGIANKQKRELAKVDHATTEYQPFRKSFYVEVPEIARMTPEEVEAYKE 356

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307202910|gb|EFN82130.1| Probable ATP-dependent RNA helicase DDX46 [Harpegnathos saltator]

 Score =  178 bits (451), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 104/178 (58%), Positives = 126/178 (70%), Gaps = 21/178 (11%)

Query: 1   MKKWNLEDDSDED----ENDNKD--------------ENGKTAEEDIDPLDAFMQGVHEE 42
           MKKW+LEDDSDE+    +N+ K+              E  K  EE++DPLDAFM  V EE
Sbjct: 179 MKKWSLEDDSDEETPVVQNNTKEAKEEGVKEEVEEVKEEVKDEEEEVDPLDAFMAEVQEE 238

Query: 43  MRKVNKP--AVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSE 100
           +RKVNK     P  A+     S ++  GVVIVTGV KK ++K KGEL+E+NQDGLEYSSE
Sbjct: 239 VRKVNKLDNKAPKNAN-NGTSSATQSGGVVIVTGVAKKKIQKQKGELIEQNQDGLEYSSE 297

Query: 101 EEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
           EE E+L  TAA +A+KQK+EL+KVDH+T +Y PFRK FYVEVPEIARMTPEEVE YKE
Sbjct: 298 EEGENLHETAAGIANKQKRELAKVDHATTDYQPFRKSFYVEVPEIARMTPEEVEIYKE 355

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340724160|ref|XP_003400452.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX46-like [Bombus terrestris]

 Score =  175 bits (443), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 104/179 (58%), Positives = 125/179 (69%), Gaps = 21/179 (11%)

Query: 1   MKKWNLEDDSDED----ENDNKD---------------ENGKTAEEDIDPLDAFMQGVHE 41
           MKKW+LEDDSDE+    +N NK+               E  K  EE++DPLDAFM  V E
Sbjct: 173 MKKWSLEDDSDEETPVVQNSNKECKEDGETKEQAEQVKEEAKCDEEEVDPLDAFMAEVQE 232

Query: 42  EMRKVNK--PAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSS 99
           E+RKVNK        A+     +G++  GVVIVTGV KK V+K KGEL+E+NQDGLEYSS
Sbjct: 233 EVRKVNKLDSKGGKNANNGTGTAGTQSGGVVIVTGVAKKKVQKQKGELIEQNQDGLEYSS 292

Query: 100 EEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
           EEE E+L  TAA +A+KQK+EL+KVDH+T EY PFRK FYVEVPEIARMT EEV+ YKE
Sbjct: 293 EEEGENLHETAAGIANKQKRELAKVDHATTEYQPFRKSFYVEVPEIARMTSEEVDAYKE 351

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345482984|ref|XP_001603634.2| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Nasonia vitripennis]

 Score =  174 bits (440), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/183 (55%), Positives = 122/183 (66%), Gaps = 32/183 (17%)

Query: 2   KKWNLEDDSDED--------------------ENDNKDENGKTAEEDIDPLDAFMQGVHE 41
           KKW+LEDDSDE+                      + K E  K  EE+IDPLDAFM  VH+
Sbjct: 181 KKWSLEDDSDEEMPIVVNKETKEEEEEEAKEENVEEKVETKKEDEEEIDPLDAFMAEVHQ 240

Query: 42  EMRKVNKPAVPTTADVKPADSGS------KPAGVVIVTGVVKKSVEKAKGELMEENQDGL 95
           E+RKVNK       D KP  +G+      +  GV+IVTGV KK V+K KGEL+E+NQDGL
Sbjct: 241 EVRKVNK------VDNKPLKTGTNCTGTGQTGGVMIVTGVAKKKVQKHKGELIEQNQDGL 294

Query: 96  EYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEK 155
           EYSSEEE E+L  TAA +A+KQK+EL+KVDH+  +Y+PF K FY EVPEIARMTPEEVE 
Sbjct: 295 EYSSEEEGENLHETAAGIANKQKRELAKVDHNATDYIPFTKAFYREVPEIARMTPEEVEL 354

Query: 156 YKE 158
           YKE
Sbjct: 355 YKE 357

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193683325|ref|XP_001948746.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Acyrthosiphon pisum]

 Score =  171 bits (432), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/177 (57%), Positives = 119/177 (67%), Gaps = 31/177 (17%)

Query: 2   KKWNLEDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNK------------- 48
           KKWNLEDDSDE+E    +      EE+IDPLDAFMQGV EE+RKVNK             
Sbjct: 131 KKWNLEDDSDEEEEAKNNAEKLIEEEEIDPLDAFMQGVQEEVRKVNKVDGHRSNLSEKNS 190

Query: 49  -------PAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEE 101
                  P V TT+           +GVVIV+GV KK     +GEL+E+NQD LEYSSEE
Sbjct: 191 LNDLNQSPGVDTTS-----------SGVVIVSGVAKKKDNNTRGELIEQNQDALEYSSEE 239

Query: 102 EQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
           EQEDL   AA+LA+KQKKEL K+DH+ I YLPFRK+FYVEVPEI+RMT EE+EKYKE
Sbjct: 240 EQEDLNVAAASLANKQKKELPKIDHAEISYLPFRKNFYVEVPEISRMTSEEIEKYKE 296

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312371167|gb|EFR19420.1| hypothetical protein AND_22552 [Anopheles darlingi]

 Score =  171 bits (432), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/144 (63%), Positives = 108/144 (75%), Gaps = 4/144 (2%)

Query: 16  DNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPT-TADVKPADSGSKPAGVVIVTG 74
           D   EN    EE+IDPLDA+M+ V+EE+RKVNK A P   +D K   S     GV I+TG
Sbjct: 331 DKTGENAVPEEEEIDPLDAYMRDVNEEVRKVNKLANPMPKSDGK---SSGTTGGVTIITG 387

Query: 75  VVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPF 134
           V K+  E  KGEL+E+NQDGLEYSSEEEQED+  TAANLA+KQKKEL+K+DHS I YLPF
Sbjct: 388 VAKQKTEAKKGELIEQNQDGLEYSSEEEQEDIKDTAANLANKQKKELAKIDHSGINYLPF 447

Query: 135 RKDFYVEVPEIARMTPEEVEKYKE 158
           RK FYVEVPEIARMT  EV+ YK+
Sbjct: 448 RKLFYVEVPEIARMTQTEVDAYKK 471

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157138330|ref|XP_001657248.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti] gi|108869525|gb|EAT33750.1| AAEL013985-PA [Aedes aegypti]

 Score =  168 bits (425), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 99/158 (62%), Positives = 125/158 (79%), Gaps = 5/158 (3%)

Query: 2   KKWNLEDDSDEDENDNKDE-NGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPA 60
           KKW+LEDD ++DE+D KD+ N    E+D+DPLDAFM+ V+EE+RKVNK  +P++A  +  
Sbjct: 196 KKWSLEDDEEDDEDDIKDKANNNDEEDDVDPLDAFMKEVNEEVRKVNK--LPSSAPKQDG 253

Query: 61  DSGSKPAGVVIVTGVVKKSVEKAK-GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK 119
            + S  +GV I+TGV KK+ E  K GEL+E+NQDGLEYSSEEEQED+  TAANLA+KQKK
Sbjct: 254 KAASN-SGVTIITGVAKKNTETTKKGELIEQNQDGLEYSSEEEQEDIKDTAANLANKQKK 312

Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
           EL+K+DHS I Y+PFRK FYVEVPEIA+MT  EV  YK
Sbjct: 313 ELAKIDHSGINYMPFRKAFYVEVPEIAKMTHAEVGVYK 350

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170039965|ref|XP_001847786.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167863566|gb|EDS26949.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  167 bits (422), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/161 (62%), Positives = 124/161 (77%), Gaps = 10/161 (6%)

Query: 2   KKWNLEDDSDEDENDNKDENGKT-AEEDIDPLDAFMQGVHEEMRKVNK---PAVPTTADV 57
           KKW+LEDD ++D++D + +      E+D+DPLDAFM+ V+EE+RKVNK   PA P  A+ 
Sbjct: 108 KKWSLEDDEEDDDDDGEGKGSANDGEDDVDPLDAFMKEVNEEVRKVNKITGPA-PKAAEG 166

Query: 58  KPADSGSKPAGVVIVTGVVKKSVEKAK-GELMEENQDGLEYSSEEEQEDLTSTAANLASK 116
           K A S    +GV I+TGV KK+ E  K GEL+E+NQDGLEYSSEEEQED+  TAANLA+K
Sbjct: 167 KAATS----SGVTIITGVAKKNTETVKKGELIEQNQDGLEYSSEEEQEDIKDTAANLANK 222

Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
           QKKEL+K+DHS I YLPFRK FYVEVPEIA+MT  EV+ YK
Sbjct: 223 QKKELAKIDHSGINYLPFRKVFYVEVPEIAKMTQTEVDAYK 263

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350408906|ref|XP_003488552.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Bombus impatiens]

 Score =  166 bits (420), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/179 (58%), Positives = 124/179 (69%), Gaps = 21/179 (11%)

Query: 1   MKKWNLEDDSDED----ENDNKD---------------ENGKTAEEDIDPLDAFMQGVHE 41
           MKKW+LEDDSDE+    +N NK+               E  K  EE++DPLDAFM  V E
Sbjct: 173 MKKWSLEDDSDEETPVVQNSNKECKEDGETKEQVEQVKEEAKCDEEEVDPLDAFMAEVQE 232

Query: 42  EMRKVNK--PAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSS 99
           E+RKVNK        A+      G++  GVVIVTGV KK V+K KGEL+E+NQDGLEYSS
Sbjct: 233 EVRKVNKLDSKGGKNANNGTGTGGTQSGGVVIVTGVAKKKVQKQKGELIEQNQDGLEYSS 292

Query: 100 EEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
           EEE E+L  TAA +A+KQK+EL+KVDH+T EY PFRK FYVEVPEIARMT EEVE YKE
Sbjct: 293 EEEGENLHETAAGIANKQKRELAKVDHATTEYQPFRKSFYVEVPEIARMTSEEVEAYKE 351

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158289704|ref|XP_311375.4| AGAP010656-PA [Anopheles gambiae str. PEST] gi|157018455|gb|EAA07045.4| AGAP010656-PA [Anopheles gambiae str. PEST]

 Score =  165 bits (418), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 95/160 (59%), Positives = 121/160 (75%), Gaps = 7/160 (4%)

Query: 2   KKWNLEDDSDEDEND---NKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVK 58
           KKW+LEDD ++DE +   +K +     EE+IDPLDAFM+ V+EE+RKVNK + P    + 
Sbjct: 201 KKWSLEDDEEDDETEDAKDKADGAAEEEEEIDPLDAFMKEVNEEVRKVNKLSNP----LP 256

Query: 59  PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
             D  +  +GV I+TGV K+  E  KGEL+E+NQDGLEYSSEEEQED+  TAANLA+KQK
Sbjct: 257 KTDGKASSSGVTIITGVAKQKQETKKGELIEQNQDGLEYSSEEEQEDIKDTAANLANKQK 316

Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
           KEL+K+DHS I Y+PFRK FYVEVPEIARMT  E++ YK+
Sbjct: 317 KELAKIDHSGINYMPFRKSFYVEVPEIARMTQTEIDAYKK 356

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	161
FB|FBgn0030631	1224	CG6227 [Drosophila melanogaste	0.763	0.100	0.5	7.4e-27
ZFIN|ZDB-GENE-030131-667	1035	ddx46 "DEAD (Asp-Glu-Ala-Asp)	0.801	0.124	0.473	2.3e-25
UNIPROTKB|E1BSC0	1031	DDX46 "Uncharacterized protein	0.813	0.127	0.462	1.6e-24
UNIPROTKB|D6RJA6	471	DDX46 "Probable ATP-dependent	0.807	0.276	0.443	7.2e-24
MGI|MGI:1920895	1032	Ddx46 "DEAD (Asp-Glu-Ala-Asp)	0.813	0.126	0.447	1.2e-23
RGD|708480	1032	Ddx46 "DEAD (Asp-Glu-Ala-Asp)	0.813	0.126	0.447	1.2e-23
UNIPROTKB|Q62780	1032	Ddx46 "Probable ATP-dependent	0.813	0.126	0.447	1.2e-23
UNIPROTKB|I3LR20	1032	DDX46 "Uncharacterized protein	0.838	0.130	0.438	3.9e-23
UNIPROTKB|Q7L014	1031	DDX46 "Probable ATP-dependent	0.807	0.126	0.443	5e-23
UNIPROTKB|F1PK90	1032	DDX46 "Uncharacterized protein	0.807	0.125	0.443	5e-23

FB|FBgn0030631 CG6227 [Drosophila melanogaster (taxid:7227)]

 Score = 315 (115.9 bits), Expect = 7.4e-27, P = 7.4e-27
 Identities = 66/132 (50%), Positives = 85/132 (64%)

Query:    26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXXEKAKG 85
             E++IDPLDA+MQ V+ EMR+VN    P      PA S                     KG
Sbjct:   370 EDEIDPLDAYMQEVNNEMRRVNNFVNP------PAKS---QGVVILTGVAKKKTTTLKKG 420

Query:    86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
             E++E+N D LEYSSE+E ED+  TA NLA K +KEL+K+DHS++ Y PFRK+FYVEVPE+
Sbjct:   421 EVIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNFYVEVPEL 480

Query:   146 ARMTPEEVEKYK 157
              RMT  +VEKY+
Sbjct:   481 TRMTAADVEKYR 492

GO:0003729 "mRNA binding" evidence=ISS

GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS

GO:0003724 "RNA helicase activity" evidence=ISS

GO:0005681 "spliceosomal complex" evidence=ISS

GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0000381 "regulation of alternative mRNA splicing, via spliceosome" evidence=IMP

GO:0005634 "nucleus" evidence=IC

ZFIN|ZDB-GENE-030131-667 ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46" [Danio rerio (taxid:7955)]

 Score = 300 (110.7 bits), Expect = 2.3e-25, P = 2.3e-25
 Identities = 62/131 (47%), Positives = 82/131 (62%)

Query:    27 EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXXEKAKGE 86
             E++DPLDA+M+ V EE++K N   +    D K   S +K                K KGE
Sbjct:   211 EEVDPLDAYMEEVKEEVKKFNMGTMKGANDKKGGMSVTKVVTVVKTKKMPHAT--KKKGE 268

Query:    87 LMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIA 146
             LME +QD +EYSSEEE+ DL +      +KQ+K L  VDH  I+Y PFRK+FYVEVPE+A
Sbjct:   269 LMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKVLEPVDHQKIQYEPFRKNFYVEVPELA 328

Query:   147 RMTPEEVEKYK 157
             RM+PEEV +Y+
Sbjct:   329 RMSPEEVSEYR 339

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0008026 "ATP-dependent helicase activity" evidence=IEA

GO:0004386 "helicase activity" evidence=IEA

GO:0000398 "mRNA splicing, via spliceosome" evidence=IMP

GO:0031017 "exocrine pancreas development" evidence=IMP

GO:0007420 "brain development" evidence=IMP

GO:0048546 "digestive tract morphogenesis" evidence=IMP

GO:0072576 "liver morphogenesis" evidence=IMP

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA

GO:0015030 "Cajal body" evidence=IEA

UNIPROTKB|E1BSC0 DDX46 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 292 (107.8 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 62/134 (46%), Positives = 84/134 (62%)

Query:    26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTT--ADVKPADSGSKPAXXXXXXXXXXXXXEKA 83
             +E++DPLDA+M+ V EE++K N  +V     ++ K   + +K               EK 
Sbjct:   221 DEELDPLDAYMEEVKEEVKKFNMRSVKGGGGSEKKSGPTVTK-VVTVVTTKKAVVETEKK 279

Query:    84 KGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVP 143
             KGELME +QD +EYSSEEE+ DL +      +KQ+K L  VDH  IEY PFRK+FYVEVP
Sbjct:   280 KGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVP 339

Query:   144 EIARMTPEEVEKYK 157
             E+A+MT EEV  Y+
Sbjct:   340 ELAKMTQEEVNVYR 353

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008026 "ATP-dependent helicase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

UNIPROTKB|D6RJA6 DDX46 "Probable ATP-dependent RNA helicase DDX46" [Homo sapiens (taxid:9606)]

 Score = 278 (102.9 bits), Expect = 7.2e-24, P = 7.2e-24
 Identities = 59/133 (44%), Positives = 82/133 (61%)

Query:    27 EDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXXXXEKAK 84
             E++DPLDA+M+ V EE++K N  +V      + K   + +K               +K K
Sbjct:   175 EELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTK-VVTVVTTKKAVVDSDKKK 233

Query:    85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
             GELME +QD +EYSSEEE+ DL +      +KQ+K L  VDH  IEY PFRK+FYVEVPE
Sbjct:   234 GELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPE 293

Query:   145 IARMTPEEVEKYK 157
             +A+M+ EEV  ++
Sbjct:   294 LAKMSQEEVNVFR 306

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0008026 "ATP-dependent helicase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

MGI|MGI:1920895 Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46" [Mus musculus (taxid:10090)]

 Score = 284 (105.0 bits), Expect = 1.2e-23, P = 1.2e-23
 Identities = 60/134 (44%), Positives = 84/134 (62%)

Query:    26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXXXXEKA 83
             +E++DPLDA+M+ V EE++K N  +V   A  + K   + +K               +K 
Sbjct:   222 DEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEKKSGPTVTK-VVTVVTTKKAVVDADKK 280

Query:    84 KGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVP 143
             KGELME +QD +EYSSEEE+ DL +      +KQ+K L  VDH  IEY PFRK+FYVEVP
Sbjct:   281 KGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVP 340

Query:   144 EIARMTPEEVEKYK 157
             E+A+M+ EEV  ++
Sbjct:   341 ELAKMSQEEVNVFR 354

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0004386 "helicase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0006397 "mRNA processing" evidence=IEA

GO:0008026 "ATP-dependent helicase activity" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

RGD|708480 Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46" [Rattus norvegicus (taxid:10116)]

 Score = 284 (105.0 bits), Expect = 1.2e-23, P = 1.2e-23
 Identities = 60/134 (44%), Positives = 84/134 (62%)

Query:    26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXXXXEKA 83
             +E++DPLDA+M+ V EE++K N  +V   A  + K   + +K               +K 
Sbjct:   222 DEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEKKSGPTVTK-VVTVVTTKKAVVDADKK 280

Query:    84 KGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVP 143
             KGELME +QD +EYSSEEE+ DL +      +KQ+K L  VDH  IEY PFRK+FYVEVP
Sbjct:   281 KGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVP 340

Query:   144 EIARMTPEEVEKYK 157
             E+A+M+ EEV  ++
Sbjct:   341 ELAKMSQEEVNVFR 354

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005730 "nucleolus" evidence=IEA;ISO

GO:0006397 "mRNA processing" evidence=IEA

GO:0008026 "ATP-dependent helicase activity" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

GO:0015030 "Cajal body" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA

UNIPROTKB|Q62780 Ddx46 "Probable ATP-dependent RNA helicase DDX46" [Rattus norvegicus (taxid:10116)]

 Score = 284 (105.0 bits), Expect = 1.2e-23, P = 1.2e-23
 Identities = 60/134 (44%), Positives = 84/134 (62%)

Query:    26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXXXXEKA 83
             +E++DPLDA+M+ V EE++K N  +V   A  + K   + +K               +K 
Sbjct:   222 DEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEKKSGPTVTK-VVTVVTTKKAVVDADKK 280

Query:    84 KGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVP 143
             KGELME +QD +EYSSEEE+ DL +      +KQ+K L  VDH  IEY PFRK+FYVEVP
Sbjct:   281 KGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVP 340

Query:   144 EIARMTPEEVEKYK 157
             E+A+M+ EEV  ++
Sbjct:   341 ELAKMSQEEVNVFR 354

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|I3LR20 DDX46 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 279 (103.3 bits), Expect = 3.9e-23, P = 3.9e-23
 Identities = 61/139 (43%), Positives = 84/139 (60%)

Query:    22 GKTAE-EDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXX 78
             G   E E++DPLDA+M+ V EE++K N  +V      + K   + +K             
Sbjct:   217 GNEVEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTK-VVTVVTTKKAVV 275

Query:    79 XXEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDF 138
               +K KGELME +QD +EYSSEEE+ DL +      +KQ+K L  VDH  IEY PFRK+F
Sbjct:   276 DSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNF 335

Query:   139 YVEVPEIARMTPEEVEKYK 157
             YVEVPE+A+M+ EEV  ++
Sbjct:   336 YVEVPELAKMSQEEVNVFR 354

GO:0005730 "nucleolus" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0008026 "ATP-dependent helicase activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q7L014 DDX46 "Probable ATP-dependent RNA helicase DDX46" [Homo sapiens (taxid:9606)]

 Score = 278 (102.9 bits), Expect = 5.0e-23, P = 5.0e-23
 Identities = 59/133 (44%), Positives = 82/133 (61%)

Query:    27 EDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXXXXEKAK 84
             E++DPLDA+M+ V EE++K N  +V      + K   + +K               +K K
Sbjct:   223 EELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTK-VVTVVTTKKAVVDSDKKK 281

Query:    85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
             GELME +QD +EYSSEEE+ DL +      +KQ+K L  VDH  IEY PFRK+FYVEVPE
Sbjct:   282 GELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPE 341

Query:   145 IARMTPEEVEKYK 157
             +A+M+ EEV  ++
Sbjct:   342 LAKMSQEEVNVFR 354

GO:0008026 "ATP-dependent helicase activity" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

GO:0015030 "Cajal body" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|F1PK90 DDX46 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 278 (102.9 bits), Expect = 5.0e-23, P = 5.0e-23
 Identities = 59/133 (44%), Positives = 82/133 (61%)

Query:    27 EDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXXXXEKAK 84
             E++DPLDA+M+ V EE++K N  +V      + K   + +K               +K K
Sbjct:   223 EELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTK-VVTVVTTKKAVVDSDKKK 281

Query:    85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
             GELME +QD +EYSSEEE+ DL +      +KQ+K L  VDH  IEY PFRK+FYVEVPE
Sbjct:   282 GELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPE 341

Query:   145 IARMTPEEVEKYK 157
             +A+M+ EEV  ++
Sbjct:   342 LAKMSQEEVNVFR 354

GO:0005524 "ATP binding" evidence=IEA

GO:0008026 "ATP-dependent helicase activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	161
PTZ00110	545	PTZ00110, PTZ00110, helicase; Provisional	5e-06

>gnl|CDD|240273 PTZ00110, PTZ00110, helicase; Provisional

 Score = 44.8 bits (106), Expect = 5e-06
 Identities = 15/42 (35%), Positives = 27/42 (64%)

Query: 114 ASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEK 155
           +S   K L  +D  +I  +PF K+FY E PE++ ++ +EV++
Sbjct: 69  SSTLGKRLQPIDWKSINLVPFEKNFYKEHPEVSALSSKEVDE 110

Length = 545

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	161
KOG0334|consensus	997		99.69
KOG0339|consensus	731		99.66
PTZ00110	545	helicase; Provisional	97.82
KOG0336|consensus	629		97.08
PLN00206	518	DEAD-box ATP-dependent RNA helicase; Provisional	94.86

>KOG0334|consensus

Probab=99.69  E-value=2.2e-17  Score=158.68  Aligned_cols=146  Identities=37%  Similarity=0.548  Sum_probs=101.5

Q ss_pred             CcccccCCCCcccc-c--c-----------ccccCCCCCcccCChHHHHHhhhHHHhhhhCCCCCCCCCCCCCCCCCCCC
Q psy12411          1 MKKWNLEDDSDEDE-N--D-----------NKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKP   66 (161)
Q Consensus         1 ~k~w~Ledd~dde~-~--~-----------~~~~~~~~eeeEiDPLDAFM~~v~~ev~k~~~~~~~~~~~~~~~~~g~~~   66 (161)
                      +|+|+|++++++++ +  +           ...+..-..++++|||||||..+..++..-+.......    .       
T Consensus       186 ~k~~~l~~~~d~~~~~~~~~~~s~q~~~~~~~~p~~~~~dd~~d~ld~~m~~~~~~~~~~~~~~~~~~----~-------  254 (997)
T KOG0334|consen  186 KKLWELEDEDDDDSANPAELGWSEQDVPELMKAPNLMLVDDEEDPLDAFMEQMVGKVLAKFSNSSHSK----A-------  254 (997)
T ss_pred             ccceEecCCCCccccCccccchhhccchhhccCccccccccccchHHHHHHHHHHHHHHHhcCCCccc----c-------
Confidence            58999999988665 1  0           11112224578899999999998755433222111100    0       


Q ss_pred             CcceEEeccchhhhh-hhhcccccc---ccCCCCCCchhhhhhHHHHHHhHHHhhcccCCCCCCCCCCcCcccccCCCCC
Q psy12411         67 AGVVIVTGVVKKSVE-KAKGELMEE---NQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEV  142 (161)
Q Consensus        67 ~~~~~~~~~~~~~~~-~~~ge~~e~---d~d~~e~~~eeed~d~~~~~~~~~~k~kk~L~~vdhs~i~y~pF~KnFY~E~  142 (161)
                       .++..+....+... +..|.++++   +.|.+++.++.+ ++...++++++.++++.|..++||++.|.|||||||+++
T Consensus       255 -~~~~~s~~~~~~~~~~~~g~v~e~~~~~~D~~e~~~~~~-~d~~~~~~~~~~~~~~~~~~~~~S~~~~epFRknfy~e~  332 (997)
T KOG0334|consen  255 -QVVEVSKDARKGLNPKLSGFVIEPGLVNGDNEEVELNGS-FDNRNAAKNMNLKAKKNLIQVDHSKISYEPFRKNFYIEV  332 (997)
T ss_pred             -cccccchhhhccCCccccceeccCCcCCcchhhhhhccc-cchHHHHHHhccccccceeecccccccchhhhhcccccc
Confidence             01111122222222 367899987   566677765544 778888888888888889999999999999999999999


Q ss_pred             hhhhcCCHHHHHHHHhh
Q psy12411        143 PEIARMTPEEVEKYKEV  159 (161)
Q Consensus       143 ~ei~~ms~eEV~~~R~~  159 (161)
                      ++|+.||.+||..||..
T Consensus       333 ~di~~ms~~eV~~yr~~  349 (997)
T KOG0334|consen  333 RDIKRMSAAEVDEYRCE  349 (997)
T ss_pred             hhHHHHHHHHHHHhhcC
Confidence            99999999999999963

>KOG0339|consensus

Probab=99.66  E-value=2e-17  Score=151.15  Aligned_cols=133  Identities=30%  Similarity=0.472  Sum_probs=91.1

Q ss_pred             cCCCCCcccCChHHHHHhhhHHHhhhhCCCCCCCCCCCCCCCCCCCCCcceEEeccchhhhhhhhccccccccCC-----
Q psy12411         20 ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDG-----   94 (161)
Q Consensus        20 ~~~~~eeeEiDPLDAFM~~v~~ev~k~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ge~~e~d~d~-----   94 (161)
                      .....+.+|+|||||||+.+.+++..............+...+. ..+ ..++.+++....++++.++|.++.-.     
T Consensus        68 ~~a~~~~de~d~ldafMA~~~d~~~sd~~~~e~kk~eRkn~dd~-~p~-~~vr~dI~~e~aae~~~kym~e~k~~~~~~e  145 (731)
T KOG0339|consen   68 AAAGGEVDEIDPLDAFMAKIEDQAQSDKKPLEQKKKERKNDDDD-DPT-ATVRADIDEEDAAEALFKYMSENKRAGAAKE  145 (731)
T ss_pred             hhccCCCCCCCCcchhhhhhhhhhhccCCccchHHHhhhccCCC-ccc-hhhhcchhhHHhHHHHHHHhhhcccchhhhh
Confidence            33456779999999999999999876443332111101000000 011 23456777777788888888765533     


Q ss_pred             -----CCCCchhhhhhHHHHHHhHHHhhcccCCCCCCCCCCcCcccccCCCCChhhhcCCHHHHHHHHhhcC
Q psy12411         95 -----LEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEVDN  161 (161)
Q Consensus        95 -----~e~~~eeed~d~~~~~~~~~~k~kk~L~~vdhs~i~y~pF~KnFY~E~~ei~~ms~eEV~~~R~~~~  161 (161)
                           ++|+++      .+.++. .||..++|++|+|++|+|+||+||||.+|.+|..|+..+|-.||+.-|
T Consensus       146 ~~~~~leydsd------~nPi~~-~kr~idpl~~idhs~i~y~p~~kdfy~e~esI~gl~~~d~~~~r~~Ln  210 (731)
T KOG0339|consen  146 CDDMCLEYDSD------GNPIAP-DKRQIDPLPPIDHSEIDYEPFNKDFYEEHESIEGLTKMDVIDLRLTLN  210 (731)
T ss_pred             cccceeecCCC------CCccCc-ccccCCCCCCcchhhccccccccccccChhhhhccccccchhhHhhhc
Confidence                 233322      123333 467889999999999999999999999999999999999999998644

>PTZ00110 helicase; Provisional

Probab=97.82  E-value=1.4e-05  Score=73.52  Aligned_cols=43  Identities=33%  Similarity=0.712  Sum_probs=40.0

Q ss_pred             ccCCCCCCCCCCcCcccccCCCCChhhhcCCHHHHHHHHhhcC
Q psy12411        119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEVDN  161 (161)
Q Consensus       119 k~L~~vdhs~i~y~pF~KnFY~E~~ei~~ms~eEV~~~R~~~~  161 (161)
                      ..|+.++|+.++|+||+||||.+++.++.|+.++|..+|..++
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (545)
T PTZ00110         74 KRLQPIDWKSINLVPFEKNFYKEHPEVSALSSKEVDEIRKEKE  116 (545)
T ss_pred             cccCCCCCccccccchhhhcccCChhhhcCCHHHHHHHHHhcC
Confidence            4689999999999999999999999999999999999998763

>KOG0336|consensus

Probab=97.08  E-value=0.00029  Score=64.53  Aligned_cols=36  Identities=19%  Similarity=0.506  Sum_probs=32.6

Q ss_pred             CCCCCCCcCcccccCCCCChhhhcCCHHHHHHHHhhcC
Q psy12411        124 VDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEVDN  161 (161)
Q Consensus       124 vdhs~i~y~pF~KnFY~E~~ei~~ms~eEV~~~R~~~~  161 (161)
                      ..|.  +++|+.||||+|+++.++||+.++..||.+|+
T Consensus       164 ~kW~--~lpPi~knfYke~~e~s~ls~~q~~~~r~en~  199 (629)
T KOG0336|consen  164 FKWA--KLPPIKKNFYKESNETSNLSKEQLQEWRKENF  199 (629)
T ss_pred             cccc--cCCchhhhhhhcCchhccCCHHHHHHHHHcCC
Confidence            3454  79999999999999999999999999999875

>PLN00206 DEAD-box ATP-dependent RNA helicase; Provisional

Probab=94.86  E-value=0.024  Score=51.90  Aligned_cols=40  Identities=15%  Similarity=0.166  Sum_probs=34.5

Q ss_pred             CCCCCCCCCc-CcccccCCCCChhhhc-CCHHHHHHHHhhcC
Q psy12411        122 SKVDHSTIEY-LPFRKDFYVEVPEIAR-MTPEEVEKYKEVDN  161 (161)
Q Consensus       122 ~~vdhs~i~y-~pF~KnFY~E~~ei~~-ms~eEV~~~R~~~~  161 (161)
                      ..++|+++.| ++|+|+||+.++.+.. |+..++..||..++
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~  108 (518)
T PLN00206         67 VAVGAPKPKRLPATDECFYVRDPGSTSGLSSSQAELLRRKLE  108 (518)
T ss_pred             CCcCCCchhhcCCcCCcCCccCcchhccCCHHHHHHHHHHCC
Confidence            4688888776 8899999999998865 99999999998754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00