Psyllid ID: psy12529

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------4
Protein Sequence
MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRPEGNV
Secondary Structure (PSIPRED)
cHHHHHHHHHcccccccccccccHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHccccccccccccccHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
MRRVLRKVAvndrevgdkstladEDVVDELFqnrpegnv
Flexible Loop (DISEMBL)
mrrvlrkvavndrevgdkstladedvvdelfqnrpegnv
Low Complexity Region (SEG)
MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRPEGNV
Disordered region (IsUnstruct)
***************************************
Disordered Region (DISOPRED)
MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRP****
Disordered Region (DISEMBL)
MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRPEGNV
Disordered Region (DISPRO)
*****R******REVGDKSTLADEDVVDELFQNRP****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiihhhhhhhhhhhhhhhhhhhhooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRPEGNV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	39	2.2.26 [Sep-21-2011]
Q9VP61	670	Acetyl-coenzyme A synthet	no	N/A	0.897	0.052	0.771	5e-10
Q3IFM6	646	Acetyl-coenzyme A synthet	yes	N/A	0.871	0.052	0.657	6e-06
Q9QXG4	701	Acetyl-coenzyme A synthet	yes	N/A	0.871	0.048	0.588	2e-05
Q9NR19	701	Acetyl-coenzyme A synthet	no	N/A	0.871	0.048	0.588	3e-05
Q21LV0	645	Acetyl-coenzyme A synthet	yes	N/A	0.871	0.052	0.628	5e-05
Q2G512	649	Acetyl-coenzyme A synthet	yes	N/A	0.923	0.055	0.594	6e-05
A6VZN8	652	Acetyl-coenzyme A synthet	yes	N/A	0.871	0.052	0.6	0.0001
Q0AAW0	645	Acetyl-coenzyme A synthet	yes	N/A	0.897	0.054	0.611	0.0001
Q15YI8	646	Acetyl-coenzyme A synthet	yes	N/A	0.871	0.052	0.6	0.0003
Q9A2I0	647	Acetyl-coenzyme A synthet	yes	N/A	0.871	0.052	0.6	0.0004

>sp|Q9VP61|ACSA_DROME Acetyl-coenzyme A synthetase OS=Drosophila melanogaster GN=AcCoAS PE=2 SV=1

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/35 (77%), Positives = 31/35 (88%)

Query: 1   MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRP 35
           MRRVLRK+AVNDR VGD STLADE +V++LF NRP
Sbjct: 632 MRRVLRKIAVNDRNVGDTSTLADEQIVEQLFANRP 666

Activates acetate so that it can be used for lipid synthesis or for energy generation.
Drosophila melanogaster (taxid: 7227)
EC: 6EC: .EC: 2EC: .EC: 1EC: .EC: 1

>sp|Q3IFM6|ACSA_PSEHT Acetyl-coenzyme A synthetase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=acsA PE=3 SV=1

 Score = 49.3 bits (116), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/35 (65%), Positives = 28/35 (80%), Gaps = 1/35 (2%)

Query: 1   MRRVLRKVAVNDRE-VGDKSTLADEDVVDELFQNR 34
           MRR+LRK+A N+ E +GD STLAD  VVDEL +NR
Sbjct: 609 MRRILRKIAANEHEQLGDTSTLADPSVVDELIENR 643

Pseudoalteromonas haloplanktis (strain TAC 125) (taxid: 326442)

EC: 6

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

>sp|Q9QXG4|ACSA_MOUSE Acetyl-coenzyme A synthetase, cytoplasmic OS=Mus musculus GN=Acss2 PE=1 SV=2

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/34 (58%), Positives = 27/34 (79%)

Query: 1   MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNR 34
           MRRVLRK+A ND ++GD ST+AD  V++ LF +R
Sbjct: 663 MRRVLRKIAQNDHDLGDTSTVADPSVINHLFSHR 696

Activates acetate so that it can be used for lipid synthesis or for energy generation.

Mus musculus (taxid: 10090)

EC: 6

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

>sp|Q9NR19|ACSA_HUMAN Acetyl-coenzyme A synthetase, cytoplasmic OS=Homo sapiens GN=ACSS2 PE=1 SV=1

 Score = 47.0 bits (110), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/34 (58%), Positives = 26/34 (76%)

Query: 1   MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNR 34
           MRRVLRK+A ND ++GD ST+AD  V+  LF +R
Sbjct: 663 MRRVLRKIAQNDHDLGDMSTVADPSVISHLFSHR 696

Activates acetate so that it can be used for lipid synthesis or for energy generation.

Homo sapiens (taxid: 9606)

EC: 6

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

>sp|Q21LV0|ACSA_SACD2 Acetyl-coenzyme A synthetase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=acsA PE=3 SV=1

 Score = 46.2 bits (108), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/35 (62%), Positives = 28/35 (80%), Gaps = 1/35 (2%)

Query: 1   MRRVLRKVAVNDRE-VGDKSTLADEDVVDELFQNR 34
           MRR+LRKVA N+ + +GD STLAD  VVD+L +NR
Sbjct: 608 MRRILRKVAANELDTLGDTSTLADPSVVDDLIENR 642

Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) (taxid: 203122)

EC: 6

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

>sp|Q2G512|ACSA_NOVAD Acetyl-coenzyme A synthetase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=acsA PE=3 SV=1

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/37 (59%), Positives = 26/37 (70%), Gaps = 1/37 (2%)

Query: 1   MRRVLRKVAVND-REVGDKSTLADEDVVDELFQNRPE 36
           MRR+LRK+  ND   +GD STLAD  VVD L  NRP+
Sbjct: 609 MRRILRKIGENDVSNLGDTSTLADPSVVDNLLANRPQ 645

Novosphingobium aromaticivorans (strain DSM 12444) (taxid: 279238)

EC: 6

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

>sp|A6VZN8|ACSA_MARMS Acetyl-coenzyme A synthetase OS=Marinomonas sp. (strain MWYL1) GN=acsA PE=3 SV=1

 Score = 45.4 bits (106), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/35 (60%), Positives = 28/35 (80%), Gaps = 1/35 (2%)

Query: 1   MRRVLRKVAVNDR-EVGDKSTLADEDVVDELFQNR 34
           MRR+LRK+A N+  ++GD STLAD  VVD+L +NR
Sbjct: 615 MRRILRKIAANEHDQLGDTSTLADPSVVDDLIENR 649

Marinomonas sp. (strain MWYL1) (taxid: 400668)

EC: 6

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

>sp|Q0AAW0|ACSA_ALHEH Acetyl-coenzyme A synthetase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=acsA PE=3 SV=1

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/36 (61%), Positives = 28/36 (77%), Gaps = 1/36 (2%)

Query: 1   MRRVLRKVAVNDRE-VGDKSTLADEDVVDELFQNRP 35
           MRR+LRKVA N+ + +GD STLAD  VVD L ++RP
Sbjct: 608 MRRILRKVAANELDSLGDTSTLADPTVVDNLIEDRP 643

Alkalilimnicola ehrlichei (strain MLHE-1) (taxid: 187272)

EC: 6

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

>sp|Q15YI8|ACSA_PSEA6 Acetyl-coenzyme A synthetase OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) GN=acsA PE=3 SV=1

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/35 (60%), Positives = 26/35 (74%), Gaps = 1/35 (2%)

Query: 1   MRRVLRKVAVNDRE-VGDKSTLADEDVVDELFQNR 34
           MRR+LRK+A N+ E +GD STLAD  VVD L + R
Sbjct: 609 MRRILRKIAANEYEQLGDTSTLADPSVVDTLIEQR 643

Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) (taxid: 342610)

EC: 6

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

>sp|Q9A2I0|ACSA_CAUCR Acetyl-coenzyme A synthetase OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=acsA PE=3 SV=1

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/35 (60%), Positives = 27/35 (77%), Gaps = 1/35 (2%)

Query: 1   MRRVLRKVAVNDR-EVGDKSTLADEDVVDELFQNR 34
           MRR+LRK+A N+   +GD STLAD  VVD+L +NR
Sbjct: 610 MRRILRKIAENELGSLGDTSTLADPSVVDDLVKNR 644

Caulobacter crescentus (strain ATCC 19089 / CB15) (taxid: 190650)

EC: 6

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	39
237858784	678	acetyl coenzyme A synthase [Acyrthosipho	0.923	0.053	0.833	6e-10
170062756	668	acetyl-CoA synthetase [Culex quinquefasc	0.897	0.052	0.771	1e-08
157108461	668	acetyl-coa synthetase [Aedes aegypti] gi	0.897	0.052	0.771	1e-08
58388862	669	AGAP006569-PA [Anopheles gambiae str. PE	0.897	0.052	0.771	2e-08
25012190	524	GM15363p [Drosophila melanogaster]	0.897	0.066	0.771	2e-08
24667955	670	acetyl coenzyme A synthase, isoform A [D	0.897	0.052	0.771	2e-08
24667959	524	acetyl coenzyme A synthase, isoform B [D	0.897	0.066	0.771	2e-08
34922289	670	RecName: Full=Acetyl-coenzyme A syntheta	0.897	0.052	0.771	2e-08
195592088	674	GD12130 [Drosophila simulans] gi|1941977	0.897	0.051	0.771	2e-08
195495647	595	GE22350 [Drosophila yakuba] gi|194181457	0.897	0.058	0.771	2e-08

>gi|237858784|ref|NP_001153823.1| acetyl coenzyme A synthase [Acyrthosiphon pisum]

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/36 (83%), Positives = 34/36 (94%)

Query: 1   MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRPE 36
           MRRVLRKVA+NDREVGD STLADE +V+ELF+NRPE
Sbjct: 641 MRRVLRKVAINDREVGDISTLADEHIVEELFKNRPE 676

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170062756|ref|XP_001866807.1| acetyl-CoA synthetase [Culex quinquefasciatus] gi|167880572|gb|EDS43955.1| acetyl-CoA synthetase [Culex quinquefasciatus]

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/35 (77%), Positives = 32/35 (91%)

Query: 1   MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRP 35
           MRRVLRKVAVNDRE+GD STLADE ++++LF NRP
Sbjct: 632 MRRVLRKVAVNDREIGDTSTLADEAIIEQLFANRP 666

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157108461|ref|XP_001650237.1| acetyl-coa synthetase [Aedes aegypti] gi|157130018|ref|XP_001655519.1| acetyl-coa synthetase [Aedes aegypti] gi|108868536|gb|EAT32761.1| AAEL015010-PA [Aedes aegypti] gi|108884402|gb|EAT48627.1| AAEL000321-PA [Aedes aegypti]

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/35 (77%), Positives = 32/35 (91%)

Query: 1   MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRP 35
           MRRVLRKVA+NDREVGD STLADE ++++LF NRP
Sbjct: 632 MRRVLRKVAINDREVGDTSTLADEAIIEQLFANRP 666

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|58388862|ref|XP_316594.2| AGAP006569-PA [Anopheles gambiae str. PEST] gi|55239326|gb|EAA11289.2| AGAP006569-PA [Anopheles gambiae str. PEST]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/35 (77%), Positives = 32/35 (91%)

Query: 1   MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRP 35
           MRRVLRKVAVNDR+VGD STLADE ++++LF NRP
Sbjct: 633 MRRVLRKVAVNDRDVGDTSTLADEAIIEQLFANRP 667

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|25012190|gb|AAN71211.1| GM15363p [Drosophila melanogaster]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/35 (77%), Positives = 31/35 (88%)

Query: 1   MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRP 35
           MRRVLRK+AVNDR VGD STLADE +V++LF NRP
Sbjct: 486 MRRVLRKIAVNDRNVGDTSTLADEQIVEQLFANRP 520

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24667955|ref|NP_730611.1| acetyl coenzyme A synthase, isoform A [Drosophila melanogaster] gi|442633865|ref|NP_001014599.2| acetyl coenzyme A synthase, isoform D [Drosophila melanogaster] gi|23094223|gb|AAF51695.2| acetyl coenzyme A synthase, isoform A [Drosophila melanogaster] gi|329112613|gb|AEB72010.1| FI04028p [Drosophila melanogaster] gi|440216111|gb|AAX52767.2| acetyl coenzyme A synthase, isoform D [Drosophila melanogaster]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/35 (77%), Positives = 31/35 (88%)

Query: 1   MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRP 35
           MRRVLRK+AVNDR VGD STLADE +V++LF NRP
Sbjct: 632 MRRVLRKIAVNDRNVGDTSTLADEQIVEQLFANRP 666

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24667959|ref|NP_524196.2| acetyl coenzyme A synthase, isoform B [Drosophila melanogaster] gi|23094224|gb|AAF51696.3| acetyl coenzyme A synthase, isoform B [Drosophila melanogaster]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/35 (77%), Positives = 31/35 (88%)

Query: 1   MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRP 35
           MRRVLRK+AVNDR VGD STLADE +V++LF NRP
Sbjct: 486 MRRVLRKIAVNDRNVGDTSTLADEQIVEQLFANRP 520

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|34922289|sp|Q9VP61.1|ACSA_DROME RecName: Full=Acetyl-coenzyme A synthetase; AltName: Full=Acetate--CoA ligase; AltName: Full=Acetyl-CoA synthetase; Short=ACS; Short=AceCS; AltName: Full=Acyl-activating enzyme gi|19528327|gb|AAL90278.1| LD12826p [Drosophila melanogaster]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/35 (77%), Positives = 31/35 (88%)

Query: 1   MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRP 35
           MRRVLRK+AVNDR VGD STLADE +V++LF NRP
Sbjct: 632 MRRVLRKIAVNDRNVGDTSTLADEQIVEQLFANRP 666

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195592088|ref|XP_002085768.1| GD12130 [Drosophila simulans] gi|194197777|gb|EDX11353.1| GD12130 [Drosophila simulans]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/35 (77%), Positives = 31/35 (88%)

Query: 1   MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRP 35
           MRRVLRK+AVNDR VGD STLADE +V++LF NRP
Sbjct: 636 MRRVLRKIAVNDRNVGDTSTLADEQIVEQLFANRP 670

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195495647|ref|XP_002095356.1| GE22350 [Drosophila yakuba] gi|194181457|gb|EDW95068.1| GE22350 [Drosophila yakuba]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/35 (77%), Positives = 31/35 (88%)

Query: 1   MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRP 35
           MRRVLRK+AVNDR VGD STLADE +V++LF NRP
Sbjct: 557 MRRVLRKIAVNDRNVGDTSTLADEQIVEQLFANRP 591

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	39
FB|FBgn0012034	670	AcCoAS "Acetyl Coenzyme A synt	0.897	0.052	0.771	9.5e-09
ZFIN|ZDB-GENE-040718-388	698	acss2 "acyl-CoA synthetase sho	0.871	0.048	0.647	2.3e-06
UNIPROTKB|F1S4Y0	701	ACSS2 "Uncharacterized protein	0.871	0.048	0.588	5.6e-05
MGI|MGI:1890410	701	Acss2 "acyl-CoA synthetase sho	0.871	0.048	0.588	5.6e-05
RGD|1305489	701	Acss2 "acyl-CoA synthetase sho	0.871	0.048	0.588	5.6e-05
UNIPROTKB|E7EWU3	651	ACSS2 "Acetyl-coenzyme A synth	0.871	0.052	0.588	6.6e-05
UNIPROTKB|Q9NR19	701	ACSS2 "Acetyl-coenzyme A synth	0.871	0.048	0.588	7.2e-05
UNIPROTKB|Q5QPH3	714	ACSS2 "Acetyl-coenzyme A synth	0.871	0.047	0.588	7.4e-05
UNIPROTKB|J9P7N4	701	ACSS2 "Uncharacterized protein	0.871	0.048	0.588	0.00012
UNIPROTKB|E2R0C6	714	ACSS2 "Uncharacterized protein	0.871	0.047	0.588	0.00012

FB|FBgn0012034 AcCoAS "Acetyl Coenzyme A synthase" [Drosophila melanogaster (taxid:7227)]

 Score = 142 (55.0 bits), Expect = 9.5e-09, P = 9.5e-09
 Identities = 27/35 (77%), Positives = 31/35 (88%)

Query:     1 MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRP 35
             MRRVLRK+AVNDR VGD STLADE +V++LF NRP
Sbjct:   632 MRRVLRKIAVNDRNVGDTSTLADEQIVEQLFANRP 666

GO:0003987 "acetate-CoA ligase activity" evidence=ISS;NAS

GO:0008152 "metabolic process" evidence=NAS

GO:0005737 "cytoplasm" evidence=NAS

GO:0016208 "AMP binding" evidence=IEA

GO:0019427 "acetyl-CoA biosynthetic process from acetate" evidence=IEA

GO:0048149 "behavioral response to ethanol" evidence=IMP

ZFIN|ZDB-GENE-040718-388 acss2 "acyl-CoA synthetase short-chain family member 2" [Danio rerio (taxid:7955)]

 Score = 120 (47.3 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 22/34 (64%), Positives = 29/34 (85%)

Query:     1 MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNR 34
             MRRVLRK+A N+R++GD STLAD  V++ LF+NR
Sbjct:   660 MRRVLRKIACNERDLGDVSTLADSSVIEHLFENR 693

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

UNIPROTKB|F1S4Y0 ACSS2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 107 (42.7 bits), Expect = 5.6e-05, P = 5.6e-05
 Identities = 20/34 (58%), Positives = 27/34 (79%)

Query:     1 MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNR 34
             MRRVLRK+A ND ++GD ST+AD  V+ +LF +R
Sbjct:   663 MRRVLRKIAQNDHDLGDTSTVADPSVITQLFSHR 696

GO:0006085 "acetyl-CoA biosynthetic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003987 "acetate-CoA ligase activity" evidence=IEA

MGI|MGI:1890410 Acss2 "acyl-CoA synthetase short-chain family member 2" [Mus musculus (taxid:10090)]

 Score = 107 (42.7 bits), Expect = 5.6e-05, P = 5.6e-05
 Identities = 20/34 (58%), Positives = 27/34 (79%)

Query:     1 MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNR 34
             MRRVLRK+A ND ++GD ST+AD  V++ LF +R
Sbjct:   663 MRRVLRKIAQNDHDLGDTSTVADPSVINHLFSHR 696

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003987 "acetate-CoA ligase activity" evidence=ISO;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0006085 "acetyl-CoA biosynthetic process" evidence=IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=ISO

GO:0016874 "ligase activity" evidence=IEA

GO:0019413 "acetate biosynthetic process" evidence=ISO

GO:0019542 "propionate biosynthetic process" evidence=ISO

RGD|1305489 Acss2 "acyl-CoA synthetase short-chain family member 2" [Rattus norvegicus (taxid:10116)]

 Score = 107 (42.7 bits), Expect = 5.6e-05, P = 5.6e-05
 Identities = 20/34 (58%), Positives = 27/34 (79%)

Query:     1 MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNR 34
             MRRVLRK+A ND ++GD ST+AD  V++ LF +R
Sbjct:   663 MRRVLRKIAQNDHDLGDTSTVADPSVINHLFSHR 696

GO:0003987 "acetate-CoA ligase activity" evidence=ISO;IDA

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0006085 "acetyl-CoA biosynthetic process" evidence=IEA;ISO

GO:0008610 "lipid biosynthetic process" evidence=ISO

GO:0019413 "acetate biosynthetic process" evidence=IDA

GO:0019542 "propionate biosynthetic process" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0005730 "nucleolus" evidence=ISO

UNIPROTKB|E7EWU3 ACSS2 "Acetyl-coenzyme A synthetase, cytoplasmic" [Homo sapiens (taxid:9606)]

 Score = 106 (42.4 bits), Expect = 6.6e-05, P = 6.6e-05
 Identities = 20/34 (58%), Positives = 26/34 (76%)

Query:     1 MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNR 34
             MRRVLRK+A ND ++GD ST+AD  V+  LF +R
Sbjct:   613 MRRVLRKIAQNDHDLGDMSTVADPSVISHLFSHR 646

GO:0003987 "acetate-CoA ligase activity" evidence=IEA

GO:0016208 "AMP binding" evidence=IEA

GO:0019427 "acetyl-CoA biosynthetic process from acetate" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|Q9NR19 ACSS2 "Acetyl-coenzyme A synthetase, cytoplasmic" [Homo sapiens (taxid:9606)]

 Score = 106 (42.4 bits), Expect = 7.2e-05, P = 7.2e-05
 Identities = 20/34 (58%), Positives = 26/34 (76%)

Query:     1 MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNR 34
             MRRVLRK+A ND ++GD ST+AD  V+  LF +R
Sbjct:   663 MRRVLRKIAQNDHDLGDMSTVADPSVISHLFSHR 696

GO:0019427 "acetyl-CoA biosynthetic process from acetate" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=IMP

GO:0005737 "cytoplasm" evidence=IC;IDA

GO:0016208 "AMP binding" evidence=IC

GO:0003987 "acetate-CoA ligase activity" evidence=IDA

GO:0005829 "cytosol" evidence=TAS

GO:0006069 "ethanol oxidation" evidence=TAS

GO:0006805 "xenobiotic metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|Q5QPH3 ACSS2 "Acetyl-coenzyme A synthetase, cytoplasmic" [Homo sapiens (taxid:9606)]

 Score = 106 (42.4 bits), Expect = 7.4e-05, P = 7.4e-05
 Identities = 20/34 (58%), Positives = 26/34 (76%)

Query:     1 MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNR 34
             MRRVLRK+A ND ++GD ST+AD  V+  LF +R
Sbjct:   676 MRRVLRKIAQNDHDLGDMSTVADPSVISHLFSHR 709

GO:0003987 "acetate-CoA ligase activity" evidence=IEA

GO:0006085 "acetyl-CoA biosynthetic process" evidence=IEA

GO:0019413 "acetate biosynthetic process" evidence=IEA

GO:0019542 "propionate biosynthetic process" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|J9P7N4 ACSS2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
 Identities = 20/34 (58%), Positives = 27/34 (79%)

Query:     1 MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNR 34
             MRRVLRK+A ND ++GD ST+AD  V+ +LF +R
Sbjct:   663 MRRVLRKIAQNDHDLGDTSTVADPTVICQLFNHR 696

GO:0003824 "catalytic activity" evidence=IEA

UNIPROTKB|E2R0C6 ACSS2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
 Identities = 20/34 (58%), Positives = 27/34 (79%)

Query:     1 MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNR 34
             MRRVLRK+A ND ++GD ST+AD  V+ +LF +R
Sbjct:   676 MRRVLRKIAQNDHDLGDTSTVADPTVICQLFNHR 709

GO:0003824 "catalytic activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A6UED8	ACSA_SINMW	6, ., 2, ., 1, ., 1	0.6	0.8717	0.0523	yes	N/A
Q0AAW0	ACSA_ALHEH	6, ., 2, ., 1, ., 1	0.6111	0.8974	0.0542	yes	N/A
Q9QXG4	ACSA_MOUSE	6, ., 2, ., 1, ., 1	0.5882	0.8717	0.0485	yes	N/A
Q15YI8	ACSA_PSEA6	6, ., 2, ., 1, ., 1	0.6	0.8717	0.0526	yes	N/A
O68040	ACSA_RHOCB	6, ., 2, ., 1, ., 1	0.6285	0.8717	0.0518	yes	N/A
Q6FYL4	ACSA_BARQU	6, ., 2, ., 1, ., 1	0.6	0.8717	0.0521	yes	N/A
Q9A2I0	ACSA_CAUCR	6, ., 2, ., 1, ., 1	0.6	0.8717	0.0525	yes	N/A
Q21LV0	ACSA_SACD2	6, ., 2, ., 1, ., 1	0.6285	0.8717	0.0527	yes	N/A
A1U2S9	ACSA_MARAV	6, ., 2, ., 1, ., 1	0.6	0.8717	0.0523	yes	N/A
Q0VSR6	ACSA_ALCBS	6, ., 2, ., 1, ., 1	0.5714	0.8717	0.0527	yes	N/A
A6VZN8	ACSA_MARMS	6, ., 2, ., 1, ., 1	0.6	0.8717	0.0521	yes	N/A
Q2G512	ACSA_NOVAD	6, ., 2, ., 1, ., 1	0.5945	0.9230	0.0554	yes	N/A
Q3IFM6	ACSA_PSEHT	6, ., 2, ., 1, ., 1	0.6571	0.8717	0.0526	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	39
PRK00174	637	PRK00174, PRK00174, acetyl-CoA synthetase; Provisi	1e-11
TIGR02188	625	TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase	2e-08
cd05966	602	cd05966, ACS, Acetyl-CoA synthetase (also known as	1e-07
PLN02654	666	PLN02654, PLN02654, acetate-CoA ligase	1e-06

>gnl|CDD|234677 PRK00174, PRK00174, acetyl-CoA synthetase; Provisional

 Score = 55.9 bits (136), Expect = 1e-11
 Identities = 18/36 (50%), Positives = 25/36 (69%)

Query: 1   MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRPE 36
           MRR+LRK+A  +  +GD STLAD  VV++L + R  
Sbjct: 600 MRRILRKIAEGEEILGDTSTLADPSVVEKLIEARQN 635

Length = 637

>gnl|CDD|233770 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase

 Score = 46.5 bits (111), Expect = 2e-08
 Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)

Query: 1   MRRVLRKVAVNDRE-VGDKSTLADEDVVDELFQN 33
           MRR+LRK+A  + E +GD STL D  VV+EL + 
Sbjct: 592 MRRLLRKIAAGEEEILGDTSTLEDPSVVEELIEA 625

This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by pfam00501. Length = 625

>gnl|CDD|213313 cd05966, ACS, Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme)

 Score = 44.5 bits (106), Expect = 1e-07
 Identities = 14/23 (60%), Positives = 18/23 (78%)

Query: 1   MRRVLRKVAVNDREVGDKSTLAD 23
           MRR+LRK+A  + E+GD STL D
Sbjct: 580 MRRILRKIAAGEEELGDTSTLED 602

Acetyl-CoA synthetase (ACS) catalyzes the formation of acetyl-CoA from acetate, CoA, and ATP. Synthesis of acetyl-CoA is carried out in a two-step reaction. In the first step, the enzyme catalyzes the synthesis of acetyl-AMP intermediate from acetate and ATP. In the second step, acetyl-AMP reacts with CoA to produce acetyl-CoA. This enzyme is widely present in all living organisms. The activity of this enzyme is crucial for maintaining the required levels of acetyl-CoA, a key intermediate in many important biosynthetic and catabolic processes. Acetyl-CoA is used in the biosynthesis of glucose, fatty acids, and cholesterol. It can also be used in the production of energy in the citric acid cycle. Eukaryotes typically have two isoforms of acetyl-CoA synthetase, a cytosolic form involved in biosynthetic processes and a mitochondrial form primarily involved in energy generation. Length = 602

>gnl|CDD|215353 PLN02654, PLN02654, acetate-CoA ligase

 Score = 41.8 bits (98), Expect = 1e-06
 Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 1/31 (3%)

Query: 1   MRRVLRKVAVND-REVGDKSTLADEDVVDEL 30
           MRR+LRK+A     E+GD STLAD  VVD+L
Sbjct: 630 MRRILRKIASRQLDELGDTSTLADPGVVDQL 660

Length = 666

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	39
KOG1175|consensus	626		98.42
PTZ00237	647	acetyl-CoA synthetase; Provisional	98.24
PRK10524	629	prpE propionyl-CoA synthetase; Provisional	98.12
TIGR02316	628	propion_prpE propionate--CoA ligase. This family c	97.9
PLN02654	666	acetate-CoA ligase	97.88
TIGR01217	652	ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym	97.86
PRK03584	655	acetoacetyl-CoA synthetase; Provisional	97.6
TIGR02188	625	Ac_CoA_lig_AcsA acetate--CoA ligase. This model de	97.59
PRK00174	637	acetyl-CoA synthetase; Provisional	97.35
PRK09188	365	serine/threonine protein kinase; Provisional	81.68

>KOG1175|consensus

Probab=98.42  E-value=2e-07  Score=63.21  Aligned_cols=33  Identities=55%  Similarity=0.700  Sum_probs=31.1

Q ss_pred             ChHHHHHHHhCCCCCCCCCccCCHHHHHHHHhhc
Q psy12529          1 MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNR   34 (39)
Q Consensus         1 mRr~Lr~i~~g~~~~gd~sTl~dp~vl~~I~~~~   34 (39)
                      |||+||+|+.|+ .+||+||++||+++++|++..
T Consensus       592 mRr~lrki~~g~-~~~d~st~~dp~v~~~~~~~~  624 (626)
T KOG1175|consen  592 MRRALRKIASGK-AVGDTSTLADPSVIDHLRSIL  624 (626)
T ss_pred             HHHHHHHHhccC-ccccccccCChHHHHHHHHhh
Confidence            799999999998 899999999999999998764

>PTZ00237 acetyl-CoA synthetase; Provisional

Probab=98.24  E-value=1.4e-06  Score=57.08  Aligned_cols=34  Identities=9%  Similarity=0.120  Sum_probs=30.6

Q ss_pred             ChHHHHHHHhCCCCCCCCCccCCHHHHHHHHhhcC
Q psy12529          1 MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRP   35 (39)
Q Consensus         1 mRr~Lr~i~~g~~~~gd~sTl~dp~vl~~I~~~~~   35 (39)
                      +|+.||++++|. .++|+|||+||+++++|++.++
T Consensus       613 ~R~~Lr~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  646 (647)
T PTZ00237        613 PRQIISKFLNDS-NYQLPDNVNDSEIFYKIKELYM  646 (647)
T ss_pred             eHHHHHHHHcCC-CCCCCccccCHHHHHHHHHHhh
Confidence            699999999886 8999999999999999987653

>PRK10524 prpE propionyl-CoA synthetase; Provisional

Probab=98.12  E-value=3.6e-06  Score=54.21  Aligned_cols=35  Identities=26%  Similarity=0.459  Sum_probs=31.3

Q ss_pred             ChHHHHHHHhCCCCCCCCCccCCHHHHHHHHhhcCC
Q psy12529          1 MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRPE   36 (39)
Q Consensus         1 mRr~Lr~i~~g~~~~gd~sTl~dp~vl~~I~~~~~~   36 (39)
                      +|+.||+++.|. +++|+|||+||+++++|++++.+
T Consensus       595 ~R~~L~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  629 (629)
T PRK10524        595 LRRAIQAIAEGR-DPGDLTTIEDPAALQQIRQALEE  629 (629)
T ss_pred             HHHHHHHHHcCC-CCCCcccccCHHHHHHHHHHhhC
Confidence            589999999986 89999999999999999987653

>TIGR02316 propion_prpE propionate--CoA ligase

Probab=97.90  E-value=1.3e-05  Score=51.88  Aligned_cols=34  Identities=21%  Similarity=0.416  Sum_probs=30.7

Q ss_pred             ChHHHHHHHhCCCCCCCCCccCCHHHHHHHHhhcC
Q psy12529          1 MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRP   35 (39)
Q Consensus         1 mRr~Lr~i~~g~~~~gd~sTl~dp~vl~~I~~~~~   35 (39)
                      +|+.||+++.|. +++|++|++||+++++|++.++
T Consensus       594 ~r~~L~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  627 (628)
T TIGR02316       594 LRRSIQALAEGR-DPGDLTTIDDPGALEQVRRAME  627 (628)
T ss_pred             HHHHHHHHHcCC-CCCCcccccCHHHHHHHHHHhh
Confidence            589999999986 8999999999999999988654

This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.

>PLN02654 acetate-CoA ligase

Probab=97.88  E-value=2e-05  Score=51.89  Aligned_cols=34  Identities=56%  Similarity=0.773  Sum_probs=29.8

Q ss_pred             ChHHHHHHHhCCC-CCCCCCccCCHHHHHHHHhhc
Q psy12529          1 MRRVLRKVAVNDR-EVGDKSTLADEDVVDELFQNR   34 (39)
Q Consensus         1 mRr~Lr~i~~g~~-~~gd~sTl~dp~vl~~I~~~~   34 (39)
                      +||.||+++.|.. +++|+|||+||+++++|++..
T Consensus       630 ~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  664 (666)
T PLN02654        630 MRRILRKIASRQLDELGDTSTLADPGVVDQLIALA  664 (666)
T ss_pred             hHHHHHHHHcCCCCCCCCcccccCHHHHHHHHHhh
Confidence            6999999999742 589999999999999998764

>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase

Probab=97.86  E-value=1.7e-05  Score=52.03  Aligned_cols=32  Identities=9%  Similarity=0.223  Sum_probs=29.2

Q ss_pred             ChHHHHHHHhCCCCCCCCCccCCHHHHHHHHhh
Q psy12529          1 MRRVLRKVAVNDREVGDKSTLADEDVVDELFQN   33 (39)
Q Consensus         1 mRr~Lr~i~~g~~~~gd~sTl~dp~vl~~I~~~   33 (39)
                      |||.||++++|+ +++++|||+||++++++++.
T Consensus       616 ~r~~Lr~~~~~~-~~~~~~~~~~~~~l~~~~~~  647 (652)
T TIGR01217       616 VEVAVKRVLQGT-PVDNPGAIDNPELLDLYEEL  647 (652)
T ss_pred             hHHHHHHHHcCC-CCCCcccccCHHHHHHHHHH
Confidence            699999999986 89999999999999999764

This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.

>PRK03584 acetoacetyl-CoA synthetase; Provisional

Probab=97.60  E-value=8e-05  Score=48.45  Aligned_cols=32  Identities=16%  Similarity=0.240  Sum_probs=28.5

Q ss_pred             ChHHHHHHHhCCCCCC---CCCccCCHHHHHHHHhh
Q psy12529          1 MRRVLRKVAVNDREVG---DKSTLADEDVVDELFQN   33 (39)
Q Consensus         1 mRr~Lr~i~~g~~~~g---d~sTl~dp~vl~~I~~~   33 (39)
                      +||.||+++.|. +++   |+||++||+++++|++.
T Consensus       615 ~r~~lr~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  649 (655)
T PRK03584        615 VELPVKKLLHGR-PVKKAVNRDALANPEALDWFADL  649 (655)
T ss_pred             hHHHHHHHHcCC-CCCCCCCcccccCHHHHHHHHHH
Confidence            699999999986 677   99999999999999764

>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase

Probab=97.59  E-value=8.5e-05  Score=47.90  Aligned_cols=32  Identities=53%  Similarity=0.835  Sum_probs=28.1

Q ss_pred             ChHHHHHHHhCCC-CCCCCCccCCHHHHHHHHh
Q psy12529          1 MRRVLRKVAVNDR-EVGDKSTLADEDVVDELFQ   32 (39)
Q Consensus         1 mRr~Lr~i~~g~~-~~gd~sTl~dp~vl~~I~~   32 (39)
                      +|+.||+++.|+. .++++||++||+++++|++
T Consensus       592 ~r~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~  624 (625)
T TIGR02188       592 MRRLLRKIAAGEEEILGDTSTLEDPSVVEELIE  624 (625)
T ss_pred             hHHHHHHHHcCCCCCCCCcccccCHHHHHHHHh
Confidence            5899999999863 3899999999999999975

This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.

>PRK00174 acetyl-CoA synthetase; Provisional

Probab=97.35  E-value=0.00025  Score=45.92  Aligned_cols=36  Identities=50%  Similarity=0.783  Sum_probs=30.4

Q ss_pred             ChHHHHHHHhCCCCCCCCCccCCHHHHHHHHhhcCC
Q psy12529          1 MRRVLRKVAVNDREVGDKSTLADEDVVDELFQNRPE   36 (39)
Q Consensus         1 mRr~Lr~i~~g~~~~gd~sTl~dp~vl~~I~~~~~~   36 (39)
                      +|+.|++++.++...+++|+++||+++++|++...+
T Consensus       600 ~R~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  635 (637)
T PRK00174        600 MRRILRKIAEGEEILGDTSTLADPSVVEKLIEARQN  635 (637)
T ss_pred             HHHHHHHHHcCCCCCCCcccccCHHHHHHHHHHHhh
Confidence            489999999875248999999999999999987643

>PRK09188 serine/threonine protein kinase; Provisional

Probab=81.68  E-value=2.4  Score=27.31  Aligned_cols=31  Identities=23%  Similarity=0.287  Sum_probs=20.3

Q ss_pred             ChHHHHHHHhCCC-CCCCCCccCCHHHHHHHHhh
Q psy12529          1 MRRVLRKVAVNDR-EVGDKSTLADEDVVDELFQN   33 (39)
Q Consensus         1 mRr~Lr~i~~g~~-~~gd~sTl~dp~vl~~I~~~   33 (39)
                      .|+.||.++.+.. .++|+  +.||++..++++.
T Consensus       318 ~R~~Lr~~~~~~~~~l~~~--~~~~~~~~~~~~~  349 (365)
T PRK09188        318 RDDILRLIAMNQIDELDDL--LREPEIRGLVEAI  349 (365)
T ss_pred             cHHHHHHHhhccccccccc--ccChhHHHHHHHH
Confidence            4889999998743 46777  5555555555443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	39
2p2q_A	652	Acetyl-Coa Synthetase, R584e Mutation Length = 652		8e-04
2p2b_A	652	Acetyl-coa Synthetase, V386a Mutation Length = 652		8e-04
2p2j_A	652	Acetyl-Coa Synthetase, K609a Mutation Length = 652		8e-04
2p2m_A	652	Acetyl-Coa Synthetase, R194a Mutation Length = 652		8e-04
2p20_A	652	Acetyl-Coa Synthetase, R584a Mutation Length = 652		8e-04
2p2f_A	652	Acetyl-coa Synthetase, Wild-type With Acetate, Amp,		8e-04
1pg3_A	652	Acetyl Coa Synthetase, Acetylated On Lys609 Length		8e-04

>pdb|2P2Q|A Chain A, Acetyl-Coa Synthetase, R584e Mutation Length = 652

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 1   MRRVLRKVAVND-REVGDKSTLADEDVVDELFQNR 34
           MRR+LRK+A  D   +GD STLAD  VV++L + +
Sbjct: 611 MRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEK 645

>pdb|2P2B|A Chain A, Acetyl-coa Synthetase, V386a Mutation Length = 652

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 1   MRRVLRKVAVND-REVGDKSTLADEDVVDELFQNR 34
           MRR+LRK+A  D   +GD STLAD  VV++L + +
Sbjct: 611 MRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEK 645

>pdb|2P2J|A Chain A, Acetyl-Coa Synthetase, K609a Mutation Length = 652

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 1   MRRVLRKVAVND-REVGDKSTLADEDVVDELFQNR 34
           MRR+LRK+A  D   +GD STLAD  VV++L + +
Sbjct: 611 MRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEK 645

>pdb|2P2M|A Chain A, Acetyl-Coa Synthetase, R194a Mutation Length = 652

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 1   MRRVLRKVAVND-REVGDKSTLADEDVVDELFQNR 34
           MRR+LRK+A  D   +GD STLAD  VV++L + +
Sbjct: 611 MRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEK 645

>pdb|2P20|A Chain A, Acetyl-Coa Synthetase, R584a Mutation Length = 652

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 1   MRRVLRKVAVND-REVGDKSTLADEDVVDELFQNR 34
           MRR+LRK+A  D   +GD STLAD  VV++L + +
Sbjct: 611 MRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEK 645

>pdb|2P2F|A Chain A, Acetyl-coa Synthetase, Wild-type With Acetate, Amp, And Coa Bound Length = 652

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 1   MRRVLRKVAVND-REVGDKSTLADEDVVDELFQNR 34
           MRR+LRK+A  D   +GD STLAD  VV++L + +
Sbjct: 611 MRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEK 645

>pdb|1PG3|A Chain A, Acetyl Coa Synthetase, Acetylated On Lys609 Length = 652

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 1   MRRVLRKVAVND-REVGDKSTLADEDVVDELFQNR 34
           MRR+LRK+A  D   +GD STLAD  VV++L + +
Sbjct: 611 MRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEK 645
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	39
1pg4_A	652	Acetyl-COA synthetase; AMP-forming, adenylate-form	1e-12
1ry2_A	663	Acetyl-coenzyme A synthetase 1, acyl-activating en	6e-12

>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Length = 652

 Score = 58.0 bits (141), Expect = 1e-12
 Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 1   MRRVLRKVAVND-REVGDKSTLADEDVVDELFQNRPE 36
           MRR+LRK+A  D   +GD STLAD  VV++L + +  
Sbjct: 611 MRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEKQA 647

>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Length = 663

 Score = 56.1 bits (136), Expect = 6e-12
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 1   MRRVLRKVAVNDRE-VGDKSTLADEDVVDELFQNR 34
           MRR+LRK+   + + +GD STL++  +V  L  + 
Sbjct: 627 MRRILRKILAGESDQLGDVSTLSNPGIVRHLIDSV 661

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	39
1ry2_A	663	Acetyl-coenzyme A synthetase 1, acyl-activating en	97.52
1pg4_A	652	Acetyl-COA synthetase; AMP-forming, adenylate-form	97.21

>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1

Probab=97.52  E-value=2.6e-05  Score=50.20  Aligned_cols=34  Identities=38%  Similarity=0.684  Sum_probs=19.7

Q ss_pred             ChHHHHHHHhCCC-CCCCCCccCCHHHHHHHHhhc
Q psy12529          1 MRRVLRKVAVNDR-EVGDKSTLADEDVVDELFQNR   34 (39)
Q Consensus         1 mRr~Lr~i~~g~~-~~gd~sTl~dp~vl~~I~~~~   34 (39)
                      +|+.||+++.++. +++|+|||+||+++++|++.+
T Consensus       627 ~R~~L~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~  661 (663)
T 1ry2_A          627 MRRILRKILAGESDQLGDVSTLSNPGIVRHLIDSV  661 (663)
T ss_dssp             CHHHHHHSCC-------------CCHHHHHHHHTT
T ss_pred             hHHHHHHHHcCCCCCCCCcccccCHHHHHHHHHHh
Confidence            6999999998631 589999999999999998754

>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*

Probab=97.21  E-value=0.00017  Score=46.19  Aligned_cols=34  Identities=53%  Similarity=0.889  Sum_probs=21.5

Q ss_pred             ChHHHHHHHhCCC-CCCCCCccCCHHHHHHHHhhc
Q psy12529          1 MRRVLRKVAVNDR-EVGDKSTLADEDVVDELFQNR   34 (39)
Q Consensus         1 mRr~Lr~i~~g~~-~~gd~sTl~dp~vl~~I~~~~   34 (39)
                      +|+.||+++.++. +++|+|||+||+++++|++..
T Consensus       611 ~R~~L~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~  645 (652)
T 1pg4_A          611 MRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEK  645 (652)
T ss_dssp             CHHHHHHHHHTC----------CCTTHHHHHHHHH
T ss_pred             hHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHh
Confidence            5999999999731 689999999999999997653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	39
d1pg4a_	643	e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en	5e-07
d1ry2a_	640	e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast	2e-05

>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643

class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

 Score = 40.8 bits (95), Expect = 5e-07
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)

Query: 1   MRRVLRKVAVND-REVGDKSTLADEDVVDELFQNR 34
           MRR+LRK+A  D   +GD STLAD  VV++L + +
Sbjct: 607 MRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEK 641

>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640

class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.4 bits (83), Expect = 2e-05
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 1   MRRVLRKVAVND-REVGDKSTLADEDVVDELFQN 33
           MRR+LRK+   +  ++GD STL++  +V  L  +
Sbjct: 604 MRRILRKILAGESDQLGDVSTLSNPGIVRHLIDS 637

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	39
d1ry2a_	640	Acetyl-CoA synthetase {Baker's yeast (Saccharomyce	98.07
d1pg4a_	643	Acetyl-CoA synthetase {Salmonella enterica [TaxId:	97.8

>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.07  E-value=4.6e-07  Score=55.51  Aligned_cols=35  Identities=37%  Similarity=0.658  Sum_probs=21.3

Q ss_pred             ChHHHHHHHhCCC-CCCCCCccCCHHHHHHHHhhcC
Q psy12529          1 MRRVLRKVAVNDR-EVGDKSTLADEDVVDELFQNRP   35 (39)
Q Consensus         1 mRr~Lr~i~~g~~-~~gd~sTl~dp~vl~~I~~~~~   35 (39)
                      +|+.||+++.|+. .++|+|||+||+++++|++++|
T Consensus       604 ~R~~Lr~~~~~~~~~~~d~~tl~np~~l~~~~~~~~  639 (640)
T d1ry2a_         604 MRRILRKILAGESDQLGDVSTLSNPGIVRHLIDSVK  639 (640)
T ss_dssp             CHHHHHHSCC-------------CCHHHHHHHHTTT
T ss_pred             cHHHHHHHHhCCccccCCcchhcCHHHHHHHHHHhc
Confidence            5999999999852 3899999999999999999876

>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]}

class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

Probab=97.80  E-value=4.1e-06  Score=52.12  Aligned_cols=35  Identities=51%  Similarity=0.862  Sum_probs=23.0

Q ss_pred             ChHHHHHHHhCCC-CCCCCCccCCHHHHHHHHhhcC
Q psy12529          1 MRRVLRKVAVNDR-EVGDKSTLADEDVVDELFQNRP   35 (39)
Q Consensus         1 mRr~Lr~i~~g~~-~~gd~sTl~dp~vl~~I~~~~~   35 (39)
                      +|+.||+++.|+. .++|+||++||+++++|++..+
T Consensus       607 ~R~~Lr~~~~~~~~~~~~~~t~~~p~~l~~~~~~~~  642 (643)
T d1pg4a_         607 MRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEKQ  642 (643)
T ss_dssp             CHHHHHHHHHTC----------CCTTHHHHHHHHHH
T ss_pred             cHHHHHHHhcCCccccCCccccCChHHHHHHHHHhc
Confidence            5999999999853 4899999999999999987654