Psyllid ID: psy12572


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360------
MMDPTVICKKTRRLKARLLEICKNEPAVLFEISRGIDMGTKECQYQFRNRRWNCTLLKKSMKKVLQRGKLYSDLYGDIDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQGKNLKPDNSNLPWKWEGCSDNLQYGLRKAKTFMNVGSLEMGDLKSLTMHHNLEAGRLVIGKSMQTECKCHGFSGSCTLRTCWRSLGPFRNVGNTLKKRFRSSIRVVPSNDGHSFVPISKTVKPPDKMDLVYSEISPNFCTENKTTGSLGTYGRECTMNSSATESCSHMCCGRGYKTDENIEYVRCNCSFKFCCDVVCDTCAKKTFIHHCL
cccHHHHHHHHHHccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHcccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEccccccHHHHHHHHHHHHcccccccccHHHHHHHHccHHHHHHHHHccccccccccccccccccEEccccccHHHHHHHHHHHHHcccEEEEcccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEcccEEEEEEEEEcccccEEEEEEEEc
cccccHHHcccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHcccEEEcccccccccccccccHHEccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEcccccccHHHHHHHHHHHccHHcccccHHHHHHHHccHHHHHHHHHHHHHHccccccccccEEHHHHHHccHHHHHHHHHHHHHcccEEEEEcccccEEEEcccccccccHccEEEEcccccccccccccccccccccEccccccccccccEEEccccccEEEEEEEEEEEEEEEEEEEEEEcEEEEEEEEEEcc
mmdptvicKKTRRLKARLLEICKNEPAVLFEISRGIDMGTKECQYQFRNRRWNCTLLKKSMKKVLQRGKLYsdlygdidskeTSFVNAVISAGVTYTLTKActkgsllncecgkikqdskETSFVNAVISAGVTYTLTKActkgsllncecgkikqgknlkpdnsnlpwkwegcsdnlqYGLRKAKtfmnvgslemgdlkslTMHHNLEAGRLVIGKsmqteckchgfsgsctlrtcwrslgpfrnvgnTLKKRFRssirvvpsndghsfvpisktvkppdkmdlvyseispnfctenkttgslgtygrectmnssatescshmccgrgyktdenieyvrcncsfkfccdvvcdtcakktfihhcl
mmdptvickktrrlKARLleicknepavlfeisrgidmGTKECQYQFRNRRWNCTLLKKSMKKVLQRGKLYSDLYGDIDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGkikqgknlkpdnsnlpwKWEGCSDNLQYGLRKAKTFMNVGSLEMGDLKSLTMHHNLEAGRLVIGKSMQTECKCHGFSGSCTLRTCWRSLGPFRNVGNTLKKrfrssirvvpsndghsfvpisktvkppdkMDLVYSEispnfctenkttgslgtyGRECTMNSSATESCSHMCCGRGYKTDENIEYVRCNCSFKFCCDVVCDTCAKKTFIHHCL
MMDPTVICKKTRRLKARLLEICKNEPAVLFEISRGIDMGTKECQYQFRNRRWNCTLLKKSMKKVLQRGKLYSDLYGDIDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQGKNLKPDNSNLPWKWEGCSDNLQYGLRKAKTFMNVGSLEMGDLKSLTMHHNLEAGRLVIGKSMQTECKCHGFSGSCTLRTCWRSLGPFRNVGNTLKKRFRSSIRVVPSNDGHSFVPISKTVKPPDKMDLVYSEISPNFCTENKTTGSLGTYGRECTMNSSATESCSHMCCGRGYKTDENIEYVRCNCSFKFCCDVVCDTCAKKTFIHHCL
*****VICKKTRRLKARLLEICKNEPAVLFEISRGIDMGTKECQYQFRNRRWNCTLLKKSMKKVLQRGKLYSDLYGDIDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQGKNLKPDNSNLPWKWEGCSDNLQYGLRKAKTFMNVGSLEMGDLKSLTMHHNLEAGRLVIGKSMQTECKCHGFSGSCTLRTCWRSLGPFRNVGNTLKKRFRSSIRVVP****HSFVPI*********MDLVYSEISPNFCTENKTTGSLGTYGRECTMNSSATESCSHMCCGRGYKTDENIEYVRCNCSFKFCCDVVCDTCAKKTFIHHC*
MMDPTVICKKTRRLKARLLEICKNEPAVLFEISRGIDMGTKECQYQFRNRRWNCTLLKKSMKKVLQRGKLYSDLYGDIDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECG*********SFVNAVISAGVTYTLTKA****************************WKWEGCSDNLQYGLRKAKTFM***************HHNLEAGRLVIGKSMQTECKCHGFSGSCTLRTCWRSLGPFRNVGNTLKKRFRS**************************DLVYSEISPNFCTENKTTGSLGTYGRECTMNSSATESCSHMCCGRGYKTDENIEYVRCNCSFKFCCDVVCDTCAKKTFIHHCL
MMDPTVICKKTRRLKARLLEICKNEPAVLFEISRGIDMGTKECQYQFRNRRWNCTLLKKSMKKVLQRGKLYSDLYGDIDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQGKNLKPDNSNLPWKWEGCSDNLQYGLRKAKTFMNVGSLEMGDLKSLTMHHNLEAGRLVIGKSMQTECKCHGFSGSCTLRTCWRSLGPFRNVGNTLKKRFRSSIRVVPSNDGHSFVPISKTVKPPDKMDLVYSEISPNFCTENKTTGSLGTYGRECTMNSSATESCSHMCCGRGYKTDENIEYVRCNCSFKFCCDVVCDTCAKKTFIHHCL
*MDPTVICKKTRRLKARLLEICKNEPAVLFEISRGIDMGTKECQYQFRNRRWNCTLLKKSMKKVLQRGKLYSDLYGDIDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKI************LPWKWEGCSDNLQYGLRKAKTFMNVGSLEMGDLKSLTMHHNLEAGRLVIGKSMQTECKCHGFSGSCTLRTCWRSLGPFRNVGNTLKKRFRSSIRVVPSNDGHSFVPISKTVKPPDKMDLVYSEISPNFCTENKTTGSLGTYGRECTMNSSATESCSHMCCGRGYKTDENIEYVRCNCSFKFCCDVVCDTCAKKTFIHHCL
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MMDPTVICKKTRRLKARLLEICKNEPAVLFEISRGIDMGTKECQYQFRNRRWNCTLLKKSMKKVLQRGKLYSDLYGDIDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQGKNLKPDNSNLPWKWEGCSDNLQYGLRKAKTFMNVGSLEMGDLKSLTMHHNLEAGRLVIGKSMQTECKCHGFSGSCTLRTCWRSLGPFRNVGNTLKKRFRSSIRVVPSNDGHSFVPISKTVKPPDKMDLVYSEISPNFCTENKTTGSLGTYGRECTMNSSATESCSHMCCGRGYKTDENIEYVRCNCSFKFCCDVVCDTCAKKTFIHHCL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query366 2.2.26 [Sep-21-2011]
P22727364 Protein Wnt-6 OS=Mus musc yes N/A 0.863 0.868 0.361 2e-72
Q9Y6F9365 Protein Wnt-6 OS=Homo sap yes N/A 0.860 0.863 0.357 1e-70
Q98SN7385 Protein Wnt-2b OS=Gallus no N/A 0.846 0.805 0.35 4e-63
Q2IBB5360 Protein Wnt-2 OS=Rhinolop N/A N/A 0.846 0.861 0.352 8e-63
Q2QL96360 Protein Wnt-2 OS=Monodelp no N/A 0.846 0.861 0.352 1e-62
Q2QL76360 Protein Wnt-2 OS=Didelphi N/A N/A 0.846 0.861 0.352 1e-62
Q1KYK5349 Protein Wnt-7a OS=Pongo p N/A N/A 0.849 0.891 0.354 1e-62
Q1KYL1349 Protein Wnt-7a OS=Pan tro yes N/A 0.849 0.891 0.354 1e-62
O00755349 Protein Wnt-7a OS=Homo sa no N/A 0.849 0.891 0.354 1e-62
Q1KYK7349 Protein Wnt-7a OS=Gorilla N/A N/A 0.849 0.891 0.354 1e-62
>sp|P22727|WNT6_MOUSE Protein Wnt-6 OS=Mus musculus GN=Wnt6 PE=1 SV=2 Back     alignment and function desciption
 Score =  272 bits (696), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 138/382 (36%), Positives = 201/382 (52%), Gaps = 66/382 (17%)

Query: 1   MMDPTVICKKTRRLKARLLEICKNEPAVLFEISRGIDMGTKECQYQFRNRRWNCTLLKKS 60
           +MDPT IC+K RRL  R  E+C+ EP V+ E++RG  +G +ECQ+QFR RRWNC+   K+
Sbjct: 33  VMDPTSICRKARRLAGRQAELCQAEPEVVAELARGARLGVRECQFQFRFRRWNCSSHSKA 92

Query: 61  MKKVLQRGKLYSDLYGDIDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQDSK 120
             +VL                                                  +QD +
Sbjct: 93  FGRVL--------------------------------------------------QQDIR 102

Query: 121 ETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQGKNLKPD---------------NS 165
           ET+FV A+ +AG ++ +T+AC+ G LL C C   +     +P                ++
Sbjct: 103 ETAFVFAITAAGASHAVTQACSMGELLQCGCQAPRGRAPPRPSGLLGTPGPPGPTGSPDA 162

Query: 166 NLPWKWEGCSDNLQYGLRKAKTFMNVGSLE-MGDLKSLTMHHNLEAGRLVIGKSMQTECK 224
           +  W+W GC D++ +G  K++ FM+       GD+++L   HN EAGRL +    +TECK
Sbjct: 163 SAAWEWGGCGDDVDFGDEKSRLFMDAQHKRGRGDIRALVQLHNNEAGRLAVRSHTRTECK 222

Query: 225 CHGFSGSCTLRTCWRSLGPFRNVGNTLKKRFRSSIRVVPSNDGHSFVPISKTVKPPDKMD 284
           CHG SGSC LRTCW+ L PFR VG  L +RF  + RV+ +NDG + +P  +T+KPP + D
Sbjct: 223 CHGLSGSCALRTCWQKLPPFREVGARLLERFHGASRVMGTNDGKALLPAVRTLKPPGRAD 282

Query: 285 LVYSEISPNFCTENKTTGSLGTYGRECTMNSSATESCSHMCCGRGYKTDENIEYVRCNCS 344
           L+Y+  SP+FC  N+ TGS GT GR C  ++     C  +CCGRG++ +       C C 
Sbjct: 283 LLYAADSPDFCAPNRRTGSPGTRGRACNSSAPDLSGCDLLCCGRGHRQESVQLEENCLCR 342

Query: 345 FKFCCDVVCDTCAKKTFIHHCL 366
           F +CC V C  C  +  +  CL
Sbjct: 343 FHWCCVVQCHRCRVRKELSLCL 364




Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. May be a signaling molecule which affects the development of discrete regions of tissues. Is likely to signal over only few cell diameters.
Mus musculus (taxid: 10090)
>sp|Q9Y6F9|WNT6_HUMAN Protein Wnt-6 OS=Homo sapiens GN=WNT6 PE=2 SV=2 Back     alignment and function description
>sp|Q98SN7|WNT2B_CHICK Protein Wnt-2b OS=Gallus gallus GN=WNT2B PE=2 SV=1 Back     alignment and function description
>sp|Q2IBB5|WNT2_RHIFE Protein Wnt-2 OS=Rhinolophus ferrumequinum GN=WNT2 PE=3 SV=1 Back     alignment and function description
>sp|Q2QL96|WNT2_MONDO Protein Wnt-2 OS=Monodelphis domestica GN=WNT2 PE=3 SV=1 Back     alignment and function description
>sp|Q2QL76|WNT2_DIDVI Protein Wnt-2 OS=Didelphis virginiana GN=WNT2 PE=3 SV=1 Back     alignment and function description
>sp|Q1KYK5|WNT7A_PONPY Protein Wnt-7a OS=Pongo pygmaeus GN=WNT7A PE=3 SV=1 Back     alignment and function description
>sp|Q1KYL1|WNT7A_PANTR Protein Wnt-7a OS=Pan troglodytes GN=WNT7A PE=3 SV=1 Back     alignment and function description
>sp|O00755|WNT7A_HUMAN Protein Wnt-7a OS=Homo sapiens GN=WNT7A PE=1 SV=2 Back     alignment and function description
>sp|Q1KYK7|WNT7A_GORGO Protein Wnt-7a OS=Gorilla gorilla gorilla GN=WNT7A PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query366
328792322356 PREDICTED: protein Wnt-6 [Apis mellifera 0.890 0.915 0.463 1e-94
380014049354 PREDICTED: LOW QUALITY PROTEIN: protein 0.890 0.920 0.460 7e-94
345486195358 PREDICTED: protein Wnt-6-like isoform 2 0.890 0.910 0.460 2e-93
350419167335 PREDICTED: protein Wnt-6-like isoform 2 0.879 0.961 0.460 2e-93
340709085356 PREDICTED: protein Wnt-6-like [Bombus te 0.879 0.904 0.460 3e-93
383864843356 PREDICTED: protein Wnt-6-like [Megachile 0.890 0.915 0.454 7e-93
345486193356 PREDICTED: protein Wnt-6-like isoform 1 0.890 0.915 0.454 7e-93
357615446345 putative Protein Wnt-6 precursor [Danaus 0.863 0.915 0.429 7e-86
321475204329 putative secreted signaling factor WNT6 0.846 0.942 0.424 3e-85
198473673395 GA18561 [Drosophila pseudoobscura pseudo 0.969 0.898 0.408 8e-84
>gi|328792322|ref|XP_396945.4| PREDICTED: protein Wnt-6 [Apis mellifera] Back     alignment and taxonomy information
 Score =  352 bits (904), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 169/365 (46%), Positives = 234/365 (64%), Gaps = 39/365 (10%)

Query: 1   MMDPTVICKKTRRLKARLLEICKNEPAVLFEISRGIDMGTKECQYQFRNRRWNCTLLKKS 60
           +MDP +ICKKTRRL+ ++ +IC+ EP++L EI+RG+ +GTKECQYQFRNRRWNCT +++S
Sbjct: 30  VMDPMLICKKTRRLRGKMADICRKEPSLLKEIARGVQVGTKECQYQFRNRRWNCTTIRRS 89

Query: 61  MKKVLQRGKLYSDLYGDIDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQDSK 120
           ++K+L R           D++ET FVNA+ +AGVTY +T+ACT G L+ C C K+     
Sbjct: 90  LRKILLR-----------DTRETGFVNAITAAGVTYAVTRACTMGHLVECSCDKMT---- 134

Query: 121 ETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQGKNLKPDNSNLPWKWEGCSDNLQY 180
                                +KG+ L      ++  K+L  +     W+W GC DN+++
Sbjct: 135 ---------------------SKGNKLGKLSRTVEMEKSLPTEGD---WEWGGCGDNVKF 170

Query: 181 GLRKAKTFMNVGSLEMGDLKSLTMHHNLEAGRLVIGKSMQTECKCHGFSGSCTLRTCWRS 240
           G +K++ FM+    +  D+K+L   HN  AGRL I + M TECKCHG SGSCT+RTCWR 
Sbjct: 171 GFKKSRDFMDAPYRKRSDIKTLVKLHNNNAGRLAIREFMSTECKCHGLSGSCTVRTCWRK 230

Query: 241 LGPFRNVGNTLKKRFRSSIRVVPSNDGHSFVPISKTVKPPDKMDLVYSEISPNFCTENKT 300
           + PFR+VGN LK+ F  + +V+PSNDGHSF+    T+KPPD+ DL+YSE SP+FC  N+ 
Sbjct: 231 MPPFRDVGNRLKESFDGAAKVIPSNDGHSFITEGPTIKPPDRFDLIYSEDSPDFCKPNRK 290

Query: 301 TGSLGTYGRECTMNSSATESCSHMCCGRGYKTDENIEYVRCNCSFKFCCDVVCDTCAKKT 360
           TGSLGT GR C   S   + C  +CCGRGY T    E + C C F++CC+V C+TC  K 
Sbjct: 291 TGSLGTQGRRCNSTSQGVDGCELLCCGRGYDTRVVKEKISCECRFRWCCEVTCNTCLVKK 350

Query: 361 FIHHC 365
            I+ C
Sbjct: 351 TINTC 355




Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380014049|ref|XP_003691056.1| PREDICTED: LOW QUALITY PROTEIN: protein Wnt-6-like [Apis florea] Back     alignment and taxonomy information
>gi|345486195|ref|XP_003425421.1| PREDICTED: protein Wnt-6-like isoform 2 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|350419167|ref|XP_003492094.1| PREDICTED: protein Wnt-6-like isoform 2 [Bombus impatiens] Back     alignment and taxonomy information
>gi|340709085|ref|XP_003393145.1| PREDICTED: protein Wnt-6-like [Bombus terrestris] gi|350419164|ref|XP_003492093.1| PREDICTED: protein Wnt-6-like isoform 1 [Bombus impatiens] Back     alignment and taxonomy information
>gi|383864843|ref|XP_003707887.1| PREDICTED: protein Wnt-6-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|345486193|ref|XP_001603351.2| PREDICTED: protein Wnt-6-like isoform 1 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|357615446|gb|EHJ69658.1| putative Protein Wnt-6 precursor [Danaus plexippus] Back     alignment and taxonomy information
>gi|321475204|gb|EFX86167.1| putative secreted signaling factor WNT6 [Daphnia pulex] Back     alignment and taxonomy information
>gi|198473673|ref|XP_001356397.2| GA18561 [Drosophila pseudoobscura pseudoobscura] gi|198138059|gb|EAL33459.2| GA18561 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query366
FB|FBgn0031902435 Wnt6 "Wnt oncogene analog 6" [ 0.579 0.487 0.430 2.8e-84
UNIPROTKB|J9NZJ2332 WNT6 "Protein Wnt" [Canis lupu 0.538 0.593 0.435 1.1e-72
ZFIN|ZDB-GENE-001106-1365 wnt3a "wingless-type MMTV inte 0.655 0.657 0.379 1.6e-65
FB|FBgn0004360352 Wnt2 "Wnt oncogene analog 2" [ 0.647 0.673 0.378 7.7e-64
UNIPROTKB|F1NZU6327 WNT6 "Protein Wnt" [Gallus gal 0.693 0.776 0.430 3.4e-61
UNIPROTKB|F1NZU7339 WNT6 "Protein Wnt" [Gallus gal 0.693 0.749 0.430 3.4e-61
UNIPROTKB|F1P4W3320 WNT6 "Protein Wnt" [Gallus gal 0.693 0.793 0.430 3.4e-61
ZFIN|ZDB-GENE-070912-513355 wnt6b "wingless-type MMTV inte 0.688 0.709 0.421 4e-58
UNIPROTKB|F1NPH2384 WNT2B "Protein Wnt" [Gallus ga 0.683 0.651 0.417 4e-58
UNIPROTKB|F1P5C4386 WNT2B "Protein Wnt" [Gallus ga 0.683 0.647 0.417 4e-58
FB|FBgn0031902 Wnt6 "Wnt oncogene analog 6" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 528 (190.9 bits), Expect = 2.8e-84, Sum P(2) = 2.8e-84
 Identities = 93/216 (43%), Positives = 134/216 (62%)

Query:   155 KQGKNLKPDNSNLP---WKWEGCSDNLQYGLRKAKTFMNVGSLEM-GDLKSLTMHHNLEA 210
             ++G+    DN   P   W+W GCSDN+ +GLR ++ F++    +   DL +L   HN  A
Sbjct:   220 RRGRRKFWDNIKFPEGQWEWGGCSDNVNFGLRHSRVFLDAKQRQRRSDLGTLVKFHNNNA 279

Query:   211 GRLVIGKSMQTECKCHGFSGSCTLRTCWRSLGPFRNVGNTLKKRFRSSIRVVPSNDGHSF 270
             GRL I  +M+ ECKCHG SGSCT++TCW  + PFR V   L+ R+ S+ +V   NDG+SF
Sbjct:   280 GRLAIRDAMRLECKCHGLSGSCTVKTCWLKMPPFREVAGRLRDRYDSARKVTLRNDGNSF 339

Query:   271 VPISKTVKPPDKMDLVYSEISPNFCTENKTTGSLGTYGRECTMNSSATESCSHMCCGRGY 330
             +P S   +P +K  LV+++ SP+FCT N  TG+LGT GREC + SS ++ C  +CC RG+
Sbjct:   340 MPESPHARPANKYQLVFADDSPDFCTPNSKTGALGTQGRECNVTSSGSDRCDRLCCNRGH 399

Query:   331 KTDENIEYVRCNCSFKFCCDVVCDTCAKKTFIHHCL 366
                   E   C C FK+CC+V C+ C +   ++ CL
Sbjct:   400 TRRIVEEQTNCKCVFKWCCEVTCEKCLEHRAVNTCL 435


GO:0016055 "Wnt receptor signaling pathway" evidence=ISS
GO:0005102 "receptor binding" evidence=ISS
GO:0005576 "extracellular region" evidence=ISS
GO:0005886 "plasma membrane" evidence=IBA
GO:0009798 "axis specification" evidence=IBA
GO:0060070 "canonical Wnt receptor signaling pathway" evidence=IBA
GO:0001664 "G-protein coupled receptor binding" evidence=IBA
GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IBA
GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IBA
GO:0005615 "extracellular space" evidence=IBA
GO:0009952 "anterior/posterior pattern specification" evidence=IBA
UNIPROTKB|J9NZJ2 WNT6 "Protein Wnt" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-001106-1 wnt3a "wingless-type MMTV integration site family, member 3A" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0004360 Wnt2 "Wnt oncogene analog 2" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1NZU6 WNT6 "Protein Wnt" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NZU7 WNT6 "Protein Wnt" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1P4W3 WNT6 "Protein Wnt" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070912-513 wnt6b "wingless-type MMTV integration site family, member 6b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NPH2 WNT2B "Protein Wnt" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1P5C4 WNT2B "Protein Wnt" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q1KYL1WNT7A_PANTRNo assigned EC number0.35400.84970.8911yesN/A
Q9Y6F9WNT6_HUMANNo assigned EC number0.35770.86060.8630yesN/A
P22727WNT6_MOUSENo assigned EC number0.36120.86330.8681yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query366
pfam00110308 pfam00110, wnt, wnt family 1e-110
smart00097305 smart00097, WNT1, found in Wnt-1 1e-101
>gnl|CDD|215724 pfam00110, wnt, wnt family Back     alignment and domain information
 Score =  324 bits (833), Expect = e-110
 Identities = 136/363 (37%), Positives = 202/363 (55%), Gaps = 58/363 (15%)

Query: 7   ICKKTRRLKARLLEICKNEPAVLFEISRGIDMGTKECQYQFRNRRWNCTLLKKSMKKVLQ 66
           IC K   L  +   +C+  P V+  +  G  +G +ECQ+QFRNRRWNC+ L  S      
Sbjct: 1   ICSKLPGLSRKQRRLCRRNPDVMASVGEGARLGIEECQHQFRNRRWNCSTLDSS------ 54

Query: 67  RGKLYSDLYGDIDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQDSKETSFVN 126
                  ++G I                                    +K+ ++ET+FV 
Sbjct: 55  ------SVFGKI------------------------------------LKRGTRETAFVY 72

Query: 127 AVISAGVTYTLTKACTKGSLLNCECGKIKQGKNLKPDNSNLPWKWEGCSDNLQYGLRKAK 186
           A+ SAGV + +T+AC++G+L +C C + ++G++         W+W GCSDN+++G+R ++
Sbjct: 73  AISSAGVVHAVTRACSEGNLESCGCDRSRRGRSGPGG-----WEWGGCSDNIKFGIRFSR 127

Query: 187 TFMNVGSLEMG-DLKSLTMHHNLEAGRLVIGKSMQTECKCHGFSGSCTLRTCWRSLGPFR 245
            F++  + E G D ++L   HN EAGR  + ++M+TECKCHG SGSCTL+TCW+ L  FR
Sbjct: 128 EFLD--ARERGRDARALMNLHNNEAGRKAVKRNMKTECKCHGVSGSCTLKTCWKQLPDFR 185

Query: 246 NVGNTLKKRFRSSIRVVPSNDGHSFVPISKTV--KPPDKMDLVYSEISPNFCTENKTTGS 303
            VG+ LK+++  +I+V  +N G     + K    KPP   DLVY E SP++C  N + GS
Sbjct: 186 EVGDLLKEKYDGAIKVEVNNRGKRRRLVRKNPKSKPPTSTDLVYLEDSPDYCERNPSLGS 245

Query: 304 LGTYGRECTMNSSATESCSHMCCGRGYKTDENIEYVRCNCSFKFCCDVVCDTCAKKTFIH 363
           LGT GREC   SS T+ C  +CCGRGY T   +   RCNC F +CC V C TC ++  ++
Sbjct: 246 LGTRGRECNKTSSGTDGCDLLCCGRGYNTRTVVVVERCNCKFHWCCYVKCKTCRERVEVY 305

Query: 364 HCL 366
            C 
Sbjct: 306 TCK 308


Wnt genes have been identified in vertebrates and invertebrates but not in plants, unicellular eukaryotes or prokaryotes. In humans, 19 WNT proteins are known. Because of their insolubility little is known about Wnt protein structure, but all have 23 or 24 Cys residues whose spacing is highly conserved. Signal transduction by Wnt proteins (including the Wnt/beta-catenin, the Wnt/Ca++, and the Wnt/polarity pathway) is mediated by receptors of the Frizzled and LDL-receptor-related protein (LRP) families. Length = 308

>gnl|CDD|128408 smart00097, WNT1, found in Wnt-1 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 366
KOG3913|consensus356 100.0
smart00097305 WNT1 found in Wnt-1. 100.0
PF00110310 wnt: wnt family; InterPro: IPR005817 Wnt proteins 100.0
>KOG3913|consensus Back     alignment and domain information
Probab=100.00  E-value=1.6e-126  Score=931.95  Aligned_cols=305  Identities=42%  Similarity=0.895  Sum_probs=290.8

Q ss_pred             hccccchhccHHHHHHHhcCchhHHHHHHHHHHHHHHHHHhhccCcccCCccc--chhhhhhhccccccCCCCCCCCcch
Q psy12572          6 VICKKTRRLKARLLEICKNEPAVLFEISRGIDMGTKECQYQFRNRRWNCTLLK--KSMKKVLQRGKLYSDLYGDIDSKET   83 (366)
Q Consensus         6 ~~C~~~~gL~~~Q~~lC~~~p~~m~~i~~G~~~ai~ECq~QF~~~RWNCs~~~--~~f~~~l~~~~~~~~~~~~~gtREt   83 (366)
                      .+|+++|||+++|+++|++||++|++|.+|+++||+|||+||+++|||||+.+  ++|+++|++           |+||+
T Consensus        46 ~~C~~l~gL~~~Q~~~Cr~~p~~~~sv~~G~~~~i~ECq~QFr~~RWNCs~~~~~~~~g~~l~~-----------g~REs  114 (356)
T KOG3913|consen   46 PLCDNLPGLSPRQRRLCRRNPDVMPSVAEGAREGIQECQFQFRFRRWNCSTLDQLPVFGPLLSR-----------GTRET  114 (356)
T ss_pred             cchhhccccCHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccccchhhcc-----------cchHH
Confidence            47999999999999999999999999999999999999999999999999976  689999999           99999


Q ss_pred             hhhhhhhhhhHHHHHHhhhcCCCCCCccCCCCcCCCcchhhhhhhhhcccccchhcccccCCcCccccCccccCCCCCCC
Q psy12572         84 SFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQGKNLKPD  163 (366)
Q Consensus        84 Afv~Ai~sAgv~~~itraCs~G~l~~C~C~~~~~~~~~~~~~~a~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  163 (366)
                      ||||||+||||+|+|||||++|.|..||||+                                       .+.+.     
T Consensus       115 AFv~AIssAgV~havtraCs~G~l~~CgCd~---------------------------------------~~~~~-----  150 (356)
T KOG3913|consen  115 AFVYAISSAGVAHAVTRACSQGNLESCGCDP---------------------------------------SPNGK-----  150 (356)
T ss_pred             HHHHHHHHhHHHHHHHHHhcCCCCCCcCCCC---------------------------------------CCCCC-----
Confidence            9999999999999999999999999999953                                       22221     


Q ss_pred             CCCCCCcccCCCCchhhhHHHHHhhhhccccccCchhHHHHhhhhhhhhHhhhcccccceeecCccCCcccceecccCCC
Q psy12572        164 NSNLPWKWEGCSDNLQYGLRKAKTFMNVGSLEMGDLKSLTMHHNLEAGRLVIGKSMQTECKCHGFSGSCTLRTCWRSLGP  243 (366)
Q Consensus       164 ~~~~~~~WgGCsdnv~~G~~~sr~Fld~~~e~~~~~~~lmnlHNn~aGR~~v~~~m~~~CKCHGvSGSC~~KTCW~~lp~  243 (366)
                      .++++|+||||||||+||++|||+|||+ +|+.+|++++||||||+|||+||.++|+++||||||||||++||||++||+
T Consensus       151 ~~~~~w~WGGCsDnv~fG~~fsr~FlD~-re~~~d~r~lmnlHNNeaGR~av~~~m~~~CKCHGvSGSC~~KTCW~~lp~  229 (356)
T KOG3913|consen  151 SGPEGWEWGGCSDNVDFGIRFSRKFLDA-REKRKDARALMNLHNNEAGRKAVKKNMRRECKCHGVSGSCTVKTCWKQLPD  229 (356)
T ss_pred             CCCCCccccCCCCchHHHHHHHHHhccc-cccccCHHHHHHHhhhHHHHHHHHHhhhhcccccCccccchhhhHHhhCcc
Confidence            2356699999999999999999999999 999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhHHHHHHhcccccccccCCCCCC----cccCCCCCCCCCCCCeEEecCCCCccccCCCCCCCCCCCCcccCCCCCCC
Q psy12572        244 FRNVGNTLKKRFRSSIRVVPSNDGHS----FVPISKTVKPPDKMDLVYSEISPNFCTENKTTGSLGTYGRECTMNSSATE  319 (366)
Q Consensus       244 F~~vg~~Lk~kY~~A~~V~~~~~~~~----~~~~~~~~~~~~~~dLVY~~~SPdyC~~n~~~Gs~GT~GR~Cn~ts~~~~  319 (366)
                      |++||+.||+||++|++|..++.+..    +.|..+.+++|++.||||+|+|||||++|+++||+||+||+||++|.+.|
T Consensus       230 Fr~vG~~Lk~KYd~A~~V~~~~~~~~~~~~~~~~~~~~~~~~~~dLVYle~SPdfC~~~~~~Gs~GT~GR~Cn~ts~g~d  309 (356)
T KOG3913|consen  230 FREVGDYLKEKYDGAIKVTVNNRGRRSAPALRPEKPRFKPPTETDLVYLEDSPDYCERNKKTGSLGTQGRECNKTSRGSD  309 (356)
T ss_pred             HHHHHHHHHHHhhhheEEeeccCCccccccccccccccCCCCCCceEEecCCChhhccCccCCCCCCCCcccCCCCCCCC
Confidence            99999999999999999999887754    77777889999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCceEEEEEEEEeeCceeEeeeEEeCccccEEEEEEeeC
Q psy12572        320 SCSHMCCGRGYKTDENIEYVRCNCSFKFCCDVVCDTCAKKTFIHHCL  366 (366)
Q Consensus       320 ~C~~LCCGRGy~t~~~~~~e~C~CkF~WCC~V~C~~C~~~~~~~~C~  366 (366)
                      +|++|||||||+|++++++|+|||||||||+|+|++|.+++++|+||
T Consensus       310 gC~~LCCGRGynt~~~~~~e~C~CkFhWCC~V~C~~C~~~~~v~tCk  356 (356)
T KOG3913|consen  310 GCDLLCCGRGYNTRRVEVVERCHCKFHWCCYVKCKECRERVEVYTCK  356 (356)
T ss_pred             CCccccCCCCCceeEEEEEEecCCEEEEeeEEECcccccEEEeeecC
Confidence            99999999999999999999999999999999999999999999997



>smart00097 WNT1 found in Wnt-1 Back     alignment and domain information
>PF00110 wnt: wnt family; InterPro: IPR005817 Wnt proteins constitute a large family of secreted molecules that are involved in intercellular signalling during development Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query366
4f0a_B316 Crystal Structure Of Xwnt8 In Complex With The Cyst 1e-42
>pdb|4F0A|B Chain B, Crystal Structure Of Xwnt8 In Complex With The Cysteine-Rich Domain Of Frizzled 8 Length = 316 Back     alignment and structure

Iteration: 1

Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 110/349 (31%), Positives = 161/349 (46%), Gaps = 70/349 (20%) Query: 32 ISRGIDMGTKECQYQFRNRRWNCTLLKKSMKKVLQRGKLYSDLYGDIDSKETSFVNAVIS 91 ++ G G +EC+YQF RWNC Sbjct: 22 VAVGAQNGIEECKYQFAWERWNCP------------------------------------ 45 Query: 92 AGVTYTLTKACTKGSLLNCECGKIKQDSKETSFVNAVISAGVTYTLTKACTKGSLLNCEC 151 TL A G ++ ++ETSFV+A+ SAGV YTLT+ C+ G NC C Sbjct: 46 ---ESTLQLATHNG---------LRSATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGC 93 Query: 152 GKIKQGKNLKPDNSNLPWKWEGCSDNLQYGLRKAKTFMNVGSLEMG-DLKSLTMHHNLEA 210 + G+ W W GCSDN ++G R +K F V LE G D ++L HN EA Sbjct: 94 DDSRNGRI-----GGRGWVWGGCSDNAEFGERISKLF--VDGLETGQDARALMNLHNNEA 146 Query: 211 GRLVIGKSMQTECKCHGFSGSCTLRTCWRSLGPFRNVGNTLKKRFRSSIRVV-------P 263 GRL + ++M+ CKCHG SGSC+++TCW L FR++GN LK + ++++ Sbjct: 147 GRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLEMDKRKMRS 206 Query: 264 SNDGHSFVPISKTVKPPDKMDLVYSEISPNFCTENKTTGSLGTYGREC-----TMNSSAT 318 N + I+ +L++ E SP++C +N + G GT GREC ++ Sbjct: 207 GNSADNRGAIADAFSSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGKNLSQWER 266 Query: 319 ESCSHMCCGRGYKTDENIEYV--RCNCSFKFCCDVVCDTCAKKTFIHHC 365 SC +C G + +E + CNC F +CC V C+ C + H C Sbjct: 267 RSCKRLCTDCGLRVEEKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFC 315

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query366
4f0a_B316 Protein WNT-8, XWNT-8; WNT signaling, ligand-recep 6e-70
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 9e-06
>4f0a_B Protein WNT-8, XWNT-8; WNT signaling, ligand-receptor complex, frizzled, fatty acylation, glycosylation, signaling protein; HET: NAG BMA MAN FUC PAM; 3.25A {Xenopus laevis} Length = 316 Back     alignment and structure
 Score =  221 bits (562), Expect = 6e-70
 Identities = 104/366 (28%), Positives = 160/366 (43%), Gaps = 68/366 (18%)

Query: 14  LKARLLEICKNEPAVLFEISRGIDMGTKECQYQFRNRRWNCTLLKKSMKKVLQRGKLYSD 73
           +   L+   K        ++ G   G +EC+YQF   RWNC      +            
Sbjct: 4   VNNFLMTGPKAYLTYSASVAVGAQNGIEECKYQFAWERWNCPESTLQLATH--------- 54

Query: 74  LYGDIDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQDSKETSFVNAVISAGV 133
                                                    ++  ++ETSFV+A+ SAGV
Sbjct: 55  ---------------------------------------NGLRSATRETSFVHAISSAGV 75

Query: 134 TYTLTKACTKGSLLNCECGKIKQGKNLKPDNSNLPWKWEGCSDNLQYGLRKAKTFMNVGS 193
            YTLT+ C+ G   NC C   + G+          W W GCSDN ++G R +K F++   
Sbjct: 76  MYTLTRNCSMGDFDNCGCDDSRNGRIGGRG-----WVWGGCSDNAEFGERISKLFVDGLE 130

Query: 194 LEMGDLKSLTMHHNLEAGRLVIGKSMQTECKCHGFSGSCTLRTCWRSLGPFRNVGNTLKK 253
               D ++L   HN EAGRL + ++M+  CKCHG SGSC+++TCW  L  FR++GN LK 
Sbjct: 131 TG-QDARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKI 189

Query: 254 RFRSSIRVVPS-------NDGHSFVPISKTVKPPDKMDLVYSEISPNFCTENKTTGSLGT 306
           +   ++++          N   +   I+         +L++ E SP++C +N + G  GT
Sbjct: 190 KHDQALKLEMDKRKMRSGNSADNRGAIADAFSSVAGSELIFLEDSPDYCLKNISLGLQGT 249

Query: 307 YGREC-----TMNSSATESCSHMCCGRGYKTDENIEYV--RCNCSFKFCCDVVCDTCAKK 359
            GREC      ++     SC  +C   G + +E    +   CNC F +CC V C+ C + 
Sbjct: 250 EGRECLQSGKNLSQWERRSCKRLCTDCGLRVEEKKTEIISSCNCKFHWCCTVKCEQCKQV 309

Query: 360 TFIHHC 365
              H C
Sbjct: 310 VIKHFC 315


>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query366
4f0a_B316 Protein WNT-8, XWNT-8; WNT signaling, ligand-recep 100.0
>4f0a_B Protein WNT-8, XWNT-8; WNT signaling, ligand-receptor complex, frizzled, fatty acylation, glycosylation, signaling protein; HET: NAG BMA MAN FUC PAM; 3.25A {Xenopus laevis} Back     alignment and structure
Probab=100.00  E-value=6.3e-115  Score=848.42  Aligned_cols=287  Identities=36%  Similarity=0.739  Sum_probs=258.1

Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhccCcccCCcccc-hhhh-hhhccccccCCCCCCCCcchhhhhhhhhhhHHHHHHhh
Q psy12572         24 NEPAVLFEISRGIDMGTKECQYQFRNRRWNCTLLKK-SMKK-VLQRGKLYSDLYGDIDSKETSFVNAVISAGVTYTLTKA  101 (366)
Q Consensus        24 ~~p~~m~~i~~G~~~ai~ECq~QF~~~RWNCs~~~~-~f~~-~l~~~~~~~~~~~~~gtREtAfv~Ai~sAgv~~~itra  101 (366)
                      +||++|++|++|+++||+|||+||+++|||||.... .|++ +|++           |+||+||||||+||||+|+||||
T Consensus        14 ~~~~~~~~v~~Ga~~~i~ECq~QFr~~RWNCs~~~~~~~~~~~l~~-----------g~REtAFv~AissAgv~~avtra   82 (316)
T 4f0a_B           14 AYLTYSASVAVGAQNGIEECKYQFAWERWNCPESTLQLATHNGLRS-----------ATRETSFVHAISSAGVMYTLTRN   82 (316)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTTSSSCCCCCTTHHHHCTTCCS-----------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cChHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCccccCCcccccC-----------CCHHHHHHHHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999997653 4555 5777           99999999999999999999999


Q ss_pred             hcCCCCCCccCCCCcCCCcchhhhhhhhhcccccchhcccccCCcCccccCccccCCCCCCCCCCCCCcccCCCCchhhh
Q psy12572        102 CTKGSLLNCECGKIKQDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQGKNLKPDNSNLPWKWEGCSDNLQYG  181 (366)
Q Consensus       102 Cs~G~l~~C~C~~~~~~~~~~~~~~a~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WgGCsdnv~~G  181 (366)
                      |++|.|..|+|+                                       ....+.     ..+++|+||||||||+||
T Consensus        83 Cs~G~l~~C~Cd---------------------------------------~~~~~~-----~~~~~w~WgGCsdnv~~G  118 (316)
T 4f0a_B           83 CSMGDFDNCGCD---------------------------------------DSRNGR-----IGGRGWVWGGCSDNAEFG  118 (316)
T ss_dssp             HHTTTCSSCCCC---------------------------------------CTTTTS-----EEETTEEECSCCCCHHHH
T ss_pred             HhCCCCCCCCCC---------------------------------------CCCCCC-----CcccCceeCCccchhHHH
Confidence            999999999994                                       322221     113579999999999999


Q ss_pred             HHHHHhhhhccccccCchhHHHHhhhhhhhhHhhhcccccceeecCccCCcccceecccCCChhhhHHHHHHhccccccc
Q psy12572        182 LRKAKTFMNVGSLEMGDLKSLTMHHNLEAGRLVIGKSMQTECKCHGFSGSCTLRTCWRSLGPFRNVGNTLKKRFRSSIRV  261 (366)
Q Consensus       182 ~~~sr~Fld~~~e~~~~~~~lmnlHNn~aGR~~v~~~m~~~CKCHGvSGSC~~KTCW~~lp~F~~vg~~Lk~kY~~A~~V  261 (366)
                      ++||++|||+ +|..+|++++||||||+|||+||.++|+++||||||||||++||||++||+|++||+.||+||++|++|
T Consensus       119 ~~fsr~F~D~-~e~~~d~r~lmnlHNn~aGR~~v~~~m~~~CKCHGvSGSCt~KTCW~~lp~Fr~VG~~LK~kyd~A~~V  197 (316)
T 4f0a_B          119 ERISKLFVDG-LETGQDARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKL  197 (316)
T ss_dssp             HHHHHHHHHH-HCCSSSHHHHHHHHHHHHHHHHHHHTCEEEEEECSGGGCTTSEEEEEECCCHHHHHHHHHHHHHTCEEC
T ss_pred             HHHHHHHhcc-ccccccHHHHHHhhchHHHHHHHHhcCeeeeecCCccccccceehcccCCCHHHHHHHHHHHhhhheEe
Confidence            9999999999 898899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCC----C---CcccCCCCCCCCCCCCeEEecCCCCccccCCCCCCCCCCCCcccCCCCCC-----CCCcccc--cC
Q psy12572        262 VPSNDG----H---SFVPISKTVKPPDKMDLVYSEISPNFCTENKTTGSLGTYGRECTMNSSAT-----ESCSHMC--CG  327 (366)
Q Consensus       262 ~~~~~~----~---~~~~~~~~~~~~~~~dLVY~~~SPdyC~~n~~~Gs~GT~GR~Cn~ts~~~-----~~C~~LC--CG  327 (366)
                      .+.+..    +   .+.|....+++|.++||||||+|||||++|+++||+||+||+||++|.|+     |||++||  ||
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~k~p~~~dLVYle~SPdfC~~n~~~Gs~GT~GR~Cn~tS~g~s~~~~dgCdlLC~~CG  277 (316)
T 4f0a_B          198 EMDKRKMRSGNSADNRGAIADAFSSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGKNLSQWERRSCKRLCTDCG  277 (316)
T ss_dssp             CC-------------CHHHHHHHHTSCSSSCEECSCCCCTTSEETTTTEECSTTCEECCCCTTCCHHHHTHHHHHTGGGT
T ss_pred             eecccccccccccccccccccccCCCCCCCeEEeCCCCcccccCCCCCCCCCCCcccCCCCCCCcCCCCCCHHHHHHhcC
Confidence            876531    1   12222233577899999999999999999999999999999999999999     9999999  99


Q ss_pred             CCceEEEEEEEEeeCceeEeeeEEeCccccEEEEEEeeC
Q psy12572        328 RGYKTDENIEYVRCNCSFKFCCDVVCDTCAKKTFIHHCL  366 (366)
Q Consensus       328 RGy~t~~~~~~e~C~CkF~WCC~V~C~~C~~~~~~~~C~  366 (366)
                      |||+|++++++|+|||||||||+|+|++|.+++++|+|.
T Consensus       278 RGy~t~~~~~~erC~CkF~WCC~V~C~~C~~~~~~~~C~  316 (316)
T 4f0a_B          278 LRVEEKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFCA  316 (316)
T ss_dssp             CCEEEEEEEEEEECSCBCCSSSCCBCCEEEEEEEEEEEC
T ss_pred             CceeEEEEEEEEeeCCEEEeeeEEECCcCCeEEEEEEeC
Confidence            999999999999999999999999999999999999994




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00