Psyllid ID: psy12572
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 366 | ||||||
| 328792322 | 356 | PREDICTED: protein Wnt-6 [Apis mellifera | 0.890 | 0.915 | 0.463 | 1e-94 | |
| 380014049 | 354 | PREDICTED: LOW QUALITY PROTEIN: protein | 0.890 | 0.920 | 0.460 | 7e-94 | |
| 345486195 | 358 | PREDICTED: protein Wnt-6-like isoform 2 | 0.890 | 0.910 | 0.460 | 2e-93 | |
| 350419167 | 335 | PREDICTED: protein Wnt-6-like isoform 2 | 0.879 | 0.961 | 0.460 | 2e-93 | |
| 340709085 | 356 | PREDICTED: protein Wnt-6-like [Bombus te | 0.879 | 0.904 | 0.460 | 3e-93 | |
| 383864843 | 356 | PREDICTED: protein Wnt-6-like [Megachile | 0.890 | 0.915 | 0.454 | 7e-93 | |
| 345486193 | 356 | PREDICTED: protein Wnt-6-like isoform 1 | 0.890 | 0.915 | 0.454 | 7e-93 | |
| 357615446 | 345 | putative Protein Wnt-6 precursor [Danaus | 0.863 | 0.915 | 0.429 | 7e-86 | |
| 321475204 | 329 | putative secreted signaling factor WNT6 | 0.846 | 0.942 | 0.424 | 3e-85 | |
| 198473673 | 395 | GA18561 [Drosophila pseudoobscura pseudo | 0.969 | 0.898 | 0.408 | 8e-84 |
| >gi|328792322|ref|XP_396945.4| PREDICTED: protein Wnt-6 [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 169/365 (46%), Positives = 234/365 (64%), Gaps = 39/365 (10%)
Query: 1 MMDPTVICKKTRRLKARLLEICKNEPAVLFEISRGIDMGTKECQYQFRNRRWNCTLLKKS 60
+MDP +ICKKTRRL+ ++ +IC+ EP++L EI+RG+ +GTKECQYQFRNRRWNCT +++S
Sbjct: 30 VMDPMLICKKTRRLRGKMADICRKEPSLLKEIARGVQVGTKECQYQFRNRRWNCTTIRRS 89
Query: 61 MKKVLQRGKLYSDLYGDIDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQDSK 120
++K+L R D++ET FVNA+ +AGVTY +T+ACT G L+ C C K+
Sbjct: 90 LRKILLR-----------DTRETGFVNAITAAGVTYAVTRACTMGHLVECSCDKMT---- 134
Query: 121 ETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQGKNLKPDNSNLPWKWEGCSDNLQY 180
+KG+ L ++ K+L + W+W GC DN+++
Sbjct: 135 ---------------------SKGNKLGKLSRTVEMEKSLPTEGD---WEWGGCGDNVKF 170
Query: 181 GLRKAKTFMNVGSLEMGDLKSLTMHHNLEAGRLVIGKSMQTECKCHGFSGSCTLRTCWRS 240
G +K++ FM+ + D+K+L HN AGRL I + M TECKCHG SGSCT+RTCWR
Sbjct: 171 GFKKSRDFMDAPYRKRSDIKTLVKLHNNNAGRLAIREFMSTECKCHGLSGSCTVRTCWRK 230
Query: 241 LGPFRNVGNTLKKRFRSSIRVVPSNDGHSFVPISKTVKPPDKMDLVYSEISPNFCTENKT 300
+ PFR+VGN LK+ F + +V+PSNDGHSF+ T+KPPD+ DL+YSE SP+FC N+
Sbjct: 231 MPPFRDVGNRLKESFDGAAKVIPSNDGHSFITEGPTIKPPDRFDLIYSEDSPDFCKPNRK 290
Query: 301 TGSLGTYGRECTMNSSATESCSHMCCGRGYKTDENIEYVRCNCSFKFCCDVVCDTCAKKT 360
TGSLGT GR C S + C +CCGRGY T E + C C F++CC+V C+TC K
Sbjct: 291 TGSLGTQGRRCNSTSQGVDGCELLCCGRGYDTRVVKEKISCECRFRWCCEVTCNTCLVKK 350
Query: 361 FIHHC 365
I+ C
Sbjct: 351 TINTC 355
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380014049|ref|XP_003691056.1| PREDICTED: LOW QUALITY PROTEIN: protein Wnt-6-like [Apis florea] | Back alignment and taxonomy information |
|---|
| >gi|345486195|ref|XP_003425421.1| PREDICTED: protein Wnt-6-like isoform 2 [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
| >gi|350419167|ref|XP_003492094.1| PREDICTED: protein Wnt-6-like isoform 2 [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|340709085|ref|XP_003393145.1| PREDICTED: protein Wnt-6-like [Bombus terrestris] gi|350419164|ref|XP_003492093.1| PREDICTED: protein Wnt-6-like isoform 1 [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|383864843|ref|XP_003707887.1| PREDICTED: protein Wnt-6-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
| >gi|345486193|ref|XP_001603351.2| PREDICTED: protein Wnt-6-like isoform 1 [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
| >gi|357615446|gb|EHJ69658.1| putative Protein Wnt-6 precursor [Danaus plexippus] | Back alignment and taxonomy information |
|---|
| >gi|321475204|gb|EFX86167.1| putative secreted signaling factor WNT6 [Daphnia pulex] | Back alignment and taxonomy information |
|---|
| >gi|198473673|ref|XP_001356397.2| GA18561 [Drosophila pseudoobscura pseudoobscura] gi|198138059|gb|EAL33459.2| GA18561 [Drosophila pseudoobscura pseudoobscura] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 366 | ||||||
| FB|FBgn0031902 | 435 | Wnt6 "Wnt oncogene analog 6" [ | 0.579 | 0.487 | 0.430 | 2.8e-84 | |
| UNIPROTKB|J9NZJ2 | 332 | WNT6 "Protein Wnt" [Canis lupu | 0.538 | 0.593 | 0.435 | 1.1e-72 | |
| ZFIN|ZDB-GENE-001106-1 | 365 | wnt3a "wingless-type MMTV inte | 0.655 | 0.657 | 0.379 | 1.6e-65 | |
| FB|FBgn0004360 | 352 | Wnt2 "Wnt oncogene analog 2" [ | 0.647 | 0.673 | 0.378 | 7.7e-64 | |
| UNIPROTKB|F1NZU6 | 327 | WNT6 "Protein Wnt" [Gallus gal | 0.693 | 0.776 | 0.430 | 3.4e-61 | |
| UNIPROTKB|F1NZU7 | 339 | WNT6 "Protein Wnt" [Gallus gal | 0.693 | 0.749 | 0.430 | 3.4e-61 | |
| UNIPROTKB|F1P4W3 | 320 | WNT6 "Protein Wnt" [Gallus gal | 0.693 | 0.793 | 0.430 | 3.4e-61 | |
| ZFIN|ZDB-GENE-070912-513 | 355 | wnt6b "wingless-type MMTV inte | 0.688 | 0.709 | 0.421 | 4e-58 | |
| UNIPROTKB|F1NPH2 | 384 | WNT2B "Protein Wnt" [Gallus ga | 0.683 | 0.651 | 0.417 | 4e-58 | |
| UNIPROTKB|F1P5C4 | 386 | WNT2B "Protein Wnt" [Gallus ga | 0.683 | 0.647 | 0.417 | 4e-58 |
| FB|FBgn0031902 Wnt6 "Wnt oncogene analog 6" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 528 (190.9 bits), Expect = 2.8e-84, Sum P(2) = 2.8e-84
Identities = 93/216 (43%), Positives = 134/216 (62%)
Query: 155 KQGKNLKPDNSNLP---WKWEGCSDNLQYGLRKAKTFMNVGSLEM-GDLKSLTMHHNLEA 210
++G+ DN P W+W GCSDN+ +GLR ++ F++ + DL +L HN A
Sbjct: 220 RRGRRKFWDNIKFPEGQWEWGGCSDNVNFGLRHSRVFLDAKQRQRRSDLGTLVKFHNNNA 279
Query: 211 GRLVIGKSMQTECKCHGFSGSCTLRTCWRSLGPFRNVGNTLKKRFRSSIRVVPSNDGHSF 270
GRL I +M+ ECKCHG SGSCT++TCW + PFR V L+ R+ S+ +V NDG+SF
Sbjct: 280 GRLAIRDAMRLECKCHGLSGSCTVKTCWLKMPPFREVAGRLRDRYDSARKVTLRNDGNSF 339
Query: 271 VPISKTVKPPDKMDLVYSEISPNFCTENKTTGSLGTYGRECTMNSSATESCSHMCCGRGY 330
+P S +P +K LV+++ SP+FCT N TG+LGT GREC + SS ++ C +CC RG+
Sbjct: 340 MPESPHARPANKYQLVFADDSPDFCTPNSKTGALGTQGRECNVTSSGSDRCDRLCCNRGH 399
Query: 331 KTDENIEYVRCNCSFKFCCDVVCDTCAKKTFIHHCL 366
E C C FK+CC+V C+ C + ++ CL
Sbjct: 400 TRRIVEEQTNCKCVFKWCCEVTCEKCLEHRAVNTCL 435
|
|
| UNIPROTKB|J9NZJ2 WNT6 "Protein Wnt" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-001106-1 wnt3a "wingless-type MMTV integration site family, member 3A" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0004360 Wnt2 "Wnt oncogene analog 2" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NZU6 WNT6 "Protein Wnt" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NZU7 WNT6 "Protein Wnt" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1P4W3 WNT6 "Protein Wnt" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-070912-513 wnt6b "wingless-type MMTV integration site family, member 6b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NPH2 WNT2B "Protein Wnt" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1P5C4 WNT2B "Protein Wnt" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 366 | |||
| pfam00110 | 308 | pfam00110, wnt, wnt family | 1e-110 | |
| smart00097 | 305 | smart00097, WNT1, found in Wnt-1 | 1e-101 |
| >gnl|CDD|215724 pfam00110, wnt, wnt family | Back alignment and domain information |
|---|
Score = 324 bits (833), Expect = e-110
Identities = 136/363 (37%), Positives = 202/363 (55%), Gaps = 58/363 (15%)
Query: 7 ICKKTRRLKARLLEICKNEPAVLFEISRGIDMGTKECQYQFRNRRWNCTLLKKSMKKVLQ 66
IC K L + +C+ P V+ + G +G +ECQ+QFRNRRWNC+ L S
Sbjct: 1 ICSKLPGLSRKQRRLCRRNPDVMASVGEGARLGIEECQHQFRNRRWNCSTLDSS------ 54
Query: 67 RGKLYSDLYGDIDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQDSKETSFVN 126
++G I +K+ ++ET+FV
Sbjct: 55 ------SVFGKI------------------------------------LKRGTRETAFVY 72
Query: 127 AVISAGVTYTLTKACTKGSLLNCECGKIKQGKNLKPDNSNLPWKWEGCSDNLQYGLRKAK 186
A+ SAGV + +T+AC++G+L +C C + ++G++ W+W GCSDN+++G+R ++
Sbjct: 73 AISSAGVVHAVTRACSEGNLESCGCDRSRRGRSGPGG-----WEWGGCSDNIKFGIRFSR 127
Query: 187 TFMNVGSLEMG-DLKSLTMHHNLEAGRLVIGKSMQTECKCHGFSGSCTLRTCWRSLGPFR 245
F++ + E G D ++L HN EAGR + ++M+TECKCHG SGSCTL+TCW+ L FR
Sbjct: 128 EFLD--ARERGRDARALMNLHNNEAGRKAVKRNMKTECKCHGVSGSCTLKTCWKQLPDFR 185
Query: 246 NVGNTLKKRFRSSIRVVPSNDGHSFVPISKTV--KPPDKMDLVYSEISPNFCTENKTTGS 303
VG+ LK+++ +I+V +N G + K KPP DLVY E SP++C N + GS
Sbjct: 186 EVGDLLKEKYDGAIKVEVNNRGKRRRLVRKNPKSKPPTSTDLVYLEDSPDYCERNPSLGS 245
Query: 304 LGTYGRECTMNSSATESCSHMCCGRGYKTDENIEYVRCNCSFKFCCDVVCDTCAKKTFIH 363
LGT GREC SS T+ C +CCGRGY T + RCNC F +CC V C TC ++ ++
Sbjct: 246 LGTRGRECNKTSSGTDGCDLLCCGRGYNTRTVVVVERCNCKFHWCCYVKCKTCRERVEVY 305
Query: 364 HCL 366
C
Sbjct: 306 TCK 308
|
Wnt genes have been identified in vertebrates and invertebrates but not in plants, unicellular eukaryotes or prokaryotes. In humans, 19 WNT proteins are known. Because of their insolubility little is known about Wnt protein structure, but all have 23 or 24 Cys residues whose spacing is highly conserved. Signal transduction by Wnt proteins (including the Wnt/beta-catenin, the Wnt/Ca++, and the Wnt/polarity pathway) is mediated by receptors of the Frizzled and LDL-receptor-related protein (LRP) families. Length = 308 |
| >gnl|CDD|128408 smart00097, WNT1, found in Wnt-1 | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 366 | |||
| KOG3913|consensus | 356 | 100.0 | ||
| smart00097 | 305 | WNT1 found in Wnt-1. | 100.0 | |
| PF00110 | 310 | wnt: wnt family; InterPro: IPR005817 Wnt proteins | 100.0 |
| >KOG3913|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-126 Score=931.95 Aligned_cols=305 Identities=42% Similarity=0.895 Sum_probs=290.8
Q ss_pred hccccchhccHHHHHHHhcCchhHHHHHHHHHHHHHHHHHhhccCcccCCccc--chhhhhhhccccccCCCCCCCCcch
Q psy12572 6 VICKKTRRLKARLLEICKNEPAVLFEISRGIDMGTKECQYQFRNRRWNCTLLK--KSMKKVLQRGKLYSDLYGDIDSKET 83 (366)
Q Consensus 6 ~~C~~~~gL~~~Q~~lC~~~p~~m~~i~~G~~~ai~ECq~QF~~~RWNCs~~~--~~f~~~l~~~~~~~~~~~~~gtREt 83 (366)
.+|+++|||+++|+++|++||++|++|.+|+++||+|||+||+++|||||+.+ ++|+++|++ |+||+
T Consensus 46 ~~C~~l~gL~~~Q~~~Cr~~p~~~~sv~~G~~~~i~ECq~QFr~~RWNCs~~~~~~~~g~~l~~-----------g~REs 114 (356)
T KOG3913|consen 46 PLCDNLPGLSPRQRRLCRRNPDVMPSVAEGAREGIQECQFQFRFRRWNCSTLDQLPVFGPLLSR-----------GTRET 114 (356)
T ss_pred cchhhccccCHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccccchhhcc-----------cchHH
Confidence 47999999999999999999999999999999999999999999999999976 689999999 99999
Q ss_pred hhhhhhhhhhHHHHHHhhhcCCCCCCccCCCCcCCCcchhhhhhhhhcccccchhcccccCCcCccccCccccCCCCCCC
Q psy12572 84 SFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQGKNLKPD 163 (366)
Q Consensus 84 Afv~Ai~sAgv~~~itraCs~G~l~~C~C~~~~~~~~~~~~~~a~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 163 (366)
||||||+||||+|+|||||++|.|..||||+ .+.+.
T Consensus 115 AFv~AIssAgV~havtraCs~G~l~~CgCd~---------------------------------------~~~~~----- 150 (356)
T KOG3913|consen 115 AFVYAISSAGVAHAVTRACSQGNLESCGCDP---------------------------------------SPNGK----- 150 (356)
T ss_pred HHHHHHHHhHHHHHHHHHhcCCCCCCcCCCC---------------------------------------CCCCC-----
Confidence 9999999999999999999999999999953 22221
Q ss_pred CCCCCCcccCCCCchhhhHHHHHhhhhccccccCchhHHHHhhhhhhhhHhhhcccccceeecCccCCcccceecccCCC
Q psy12572 164 NSNLPWKWEGCSDNLQYGLRKAKTFMNVGSLEMGDLKSLTMHHNLEAGRLVIGKSMQTECKCHGFSGSCTLRTCWRSLGP 243 (366)
Q Consensus 164 ~~~~~~~WgGCsdnv~~G~~~sr~Fld~~~e~~~~~~~lmnlHNn~aGR~~v~~~m~~~CKCHGvSGSC~~KTCW~~lp~ 243 (366)
.++++|+||||||||+||++|||+|||+ +|+.+|++++||||||+|||+||.++|+++||||||||||++||||++||+
T Consensus 151 ~~~~~w~WGGCsDnv~fG~~fsr~FlD~-re~~~d~r~lmnlHNNeaGR~av~~~m~~~CKCHGvSGSC~~KTCW~~lp~ 229 (356)
T KOG3913|consen 151 SGPEGWEWGGCSDNVDFGIRFSRKFLDA-REKRKDARALMNLHNNEAGRKAVKKNMRRECKCHGVSGSCTVKTCWKQLPD 229 (356)
T ss_pred CCCCCccccCCCCchHHHHHHHHHhccc-cccccCHHHHHHHhhhHHHHHHHHHhhhhcccccCccccchhhhHHhhCcc
Confidence 2356699999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHhcccccccccCCCCCC----cccCCCCCCCCCCCCeEEecCCCCccccCCCCCCCCCCCCcccCCCCCCC
Q psy12572 244 FRNVGNTLKKRFRSSIRVVPSNDGHS----FVPISKTVKPPDKMDLVYSEISPNFCTENKTTGSLGTYGRECTMNSSATE 319 (366)
Q Consensus 244 F~~vg~~Lk~kY~~A~~V~~~~~~~~----~~~~~~~~~~~~~~dLVY~~~SPdyC~~n~~~Gs~GT~GR~Cn~ts~~~~ 319 (366)
|++||+.||+||++|++|..++.+.. +.|..+.+++|++.||||+|+|||||++|+++||+||+||+||++|.+.|
T Consensus 230 Fr~vG~~Lk~KYd~A~~V~~~~~~~~~~~~~~~~~~~~~~~~~~dLVYle~SPdfC~~~~~~Gs~GT~GR~Cn~ts~g~d 309 (356)
T KOG3913|consen 230 FREVGDYLKEKYDGAIKVTVNNRGRRSAPALRPEKPRFKPPTETDLVYLEDSPDYCERNKKTGSLGTQGRECNKTSRGSD 309 (356)
T ss_pred HHHHHHHHHHHhhhheEEeeccCCccccccccccccccCCCCCCceEEecCCChhhccCccCCCCCCCCcccCCCCCCCC
Confidence 99999999999999999999887754 77777889999999999999999999999999999999999999999999
Q ss_pred CCcccccCCCceEEEEEEEEeeCceeEeeeEEeCccccEEEEEEeeC
Q psy12572 320 SCSHMCCGRGYKTDENIEYVRCNCSFKFCCDVVCDTCAKKTFIHHCL 366 (366)
Q Consensus 320 ~C~~LCCGRGy~t~~~~~~e~C~CkF~WCC~V~C~~C~~~~~~~~C~ 366 (366)
+|++|||||||+|++++++|+|||||||||+|+|++|.+++++|+||
T Consensus 310 gC~~LCCGRGynt~~~~~~e~C~CkFhWCC~V~C~~C~~~~~v~tCk 356 (356)
T KOG3913|consen 310 GCDLLCCGRGYNTRRVEVVERCHCKFHWCCYVKCKECRERVEVYTCK 356 (356)
T ss_pred CCccccCCCCCceeEEEEEEecCCEEEEeeEEECcccccEEEeeecC
Confidence 99999999999999999999999999999999999999999999997
|
|
| >smart00097 WNT1 found in Wnt-1 | Back alignment and domain information |
|---|
| >PF00110 wnt: wnt family; InterPro: IPR005817 Wnt proteins constitute a large family of secreted molecules that are involved in intercellular signalling during development | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 366 | ||||
| 4f0a_B | 316 | Crystal Structure Of Xwnt8 In Complex With The Cyst | 1e-42 |
| >pdb|4F0A|B Chain B, Crystal Structure Of Xwnt8 In Complex With The Cysteine-Rich Domain Of Frizzled 8 Length = 316 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 366 | |||
| 4f0a_B | 316 | Protein WNT-8, XWNT-8; WNT signaling, ligand-recep | 6e-70 | |
| 1qzv_F | 154 | Plant photosystem I: subunit PSAF; photosynthesis, | 9e-06 |
| >4f0a_B Protein WNT-8, XWNT-8; WNT signaling, ligand-receptor complex, frizzled, fatty acylation, glycosylation, signaling protein; HET: NAG BMA MAN FUC PAM; 3.25A {Xenopus laevis} Length = 316 | Back alignment and structure |
|---|
Score = 221 bits (562), Expect = 6e-70
Identities = 104/366 (28%), Positives = 160/366 (43%), Gaps = 68/366 (18%)
Query: 14 LKARLLEICKNEPAVLFEISRGIDMGTKECQYQFRNRRWNCTLLKKSMKKVLQRGKLYSD 73
+ L+ K ++ G G +EC+YQF RWNC +
Sbjct: 4 VNNFLMTGPKAYLTYSASVAVGAQNGIEECKYQFAWERWNCPESTLQLATH--------- 54
Query: 74 LYGDIDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQDSKETSFVNAVISAGV 133
++ ++ETSFV+A+ SAGV
Sbjct: 55 ---------------------------------------NGLRSATRETSFVHAISSAGV 75
Query: 134 TYTLTKACTKGSLLNCECGKIKQGKNLKPDNSNLPWKWEGCSDNLQYGLRKAKTFMNVGS 193
YTLT+ C+ G NC C + G+ W W GCSDN ++G R +K F++
Sbjct: 76 MYTLTRNCSMGDFDNCGCDDSRNGRIGGRG-----WVWGGCSDNAEFGERISKLFVDGLE 130
Query: 194 LEMGDLKSLTMHHNLEAGRLVIGKSMQTECKCHGFSGSCTLRTCWRSLGPFRNVGNTLKK 253
D ++L HN EAGRL + ++M+ CKCHG SGSC+++TCW L FR++GN LK
Sbjct: 131 TG-QDARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKI 189
Query: 254 RFRSSIRVVPS-------NDGHSFVPISKTVKPPDKMDLVYSEISPNFCTENKTTGSLGT 306
+ ++++ N + I+ +L++ E SP++C +N + G GT
Sbjct: 190 KHDQALKLEMDKRKMRSGNSADNRGAIADAFSSVAGSELIFLEDSPDYCLKNISLGLQGT 249
Query: 307 YGREC-----TMNSSATESCSHMCCGRGYKTDENIEYV--RCNCSFKFCCDVVCDTCAKK 359
GREC ++ SC +C G + +E + CNC F +CC V C+ C +
Sbjct: 250 EGRECLQSGKNLSQWERRSCKRLCTDCGLRVEEKKTEIISSCNCKFHWCCTVKCEQCKQV 309
Query: 360 TFIHHC 365
H C
Sbjct: 310 VIKHFC 315
|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 366 | |||
| 4f0a_B | 316 | Protein WNT-8, XWNT-8; WNT signaling, ligand-recep | 100.0 |
| >4f0a_B Protein WNT-8, XWNT-8; WNT signaling, ligand-receptor complex, frizzled, fatty acylation, glycosylation, signaling protein; HET: NAG BMA MAN FUC PAM; 3.25A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-115 Score=848.42 Aligned_cols=287 Identities=36% Similarity=0.739 Sum_probs=258.1
Q ss_pred cCchhHHHHHHHHHHHHHHHHHhhccCcccCCcccc-hhhh-hhhccccccCCCCCCCCcchhhhhhhhhhhHHHHHHhh
Q psy12572 24 NEPAVLFEISRGIDMGTKECQYQFRNRRWNCTLLKK-SMKK-VLQRGKLYSDLYGDIDSKETSFVNAVISAGVTYTLTKA 101 (366)
Q Consensus 24 ~~p~~m~~i~~G~~~ai~ECq~QF~~~RWNCs~~~~-~f~~-~l~~~~~~~~~~~~~gtREtAfv~Ai~sAgv~~~itra 101 (366)
+||++|++|++|+++||+|||+||+++|||||.... .|++ +|++ |+||+||||||+||||+|+||||
T Consensus 14 ~~~~~~~~v~~Ga~~~i~ECq~QFr~~RWNCs~~~~~~~~~~~l~~-----------g~REtAFv~AissAgv~~avtra 82 (316)
T 4f0a_B 14 AYLTYSASVAVGAQNGIEECKYQFAWERWNCPESTLQLATHNGLRS-----------ATRETSFVHAISSAGVMYTLTRN 82 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTSSSCCCCCTTHHHHCTTCCS-----------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCccccCCcccccC-----------CCHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999997653 4555 5777 99999999999999999999999
Q ss_pred hcCCCCCCccCCCCcCCCcchhhhhhhhhcccccchhcccccCCcCccccCccccCCCCCCCCCCCCCcccCCCCchhhh
Q psy12572 102 CTKGSLLNCECGKIKQDSKETSFVNAVISAGVTYTLTKACTKGSLLNCECGKIKQGKNLKPDNSNLPWKWEGCSDNLQYG 181 (366)
Q Consensus 102 Cs~G~l~~C~C~~~~~~~~~~~~~~a~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WgGCsdnv~~G 181 (366)
|++|.|..|+|+ ....+. ..+++|+||||||||+||
T Consensus 83 Cs~G~l~~C~Cd---------------------------------------~~~~~~-----~~~~~w~WgGCsdnv~~G 118 (316)
T 4f0a_B 83 CSMGDFDNCGCD---------------------------------------DSRNGR-----IGGRGWVWGGCSDNAEFG 118 (316)
T ss_dssp HHTTTCSSCCCC---------------------------------------CTTTTS-----EEETTEEECSCCCCHHHH
T ss_pred HhCCCCCCCCCC---------------------------------------CCCCCC-----CcccCceeCCccchhHHH
Confidence 999999999994 322221 113579999999999999
Q ss_pred HHHHHhhhhccccccCchhHHHHhhhhhhhhHhhhcccccceeecCccCCcccceecccCCChhhhHHHHHHhccccccc
Q psy12572 182 LRKAKTFMNVGSLEMGDLKSLTMHHNLEAGRLVIGKSMQTECKCHGFSGSCTLRTCWRSLGPFRNVGNTLKKRFRSSIRV 261 (366)
Q Consensus 182 ~~~sr~Fld~~~e~~~~~~~lmnlHNn~aGR~~v~~~m~~~CKCHGvSGSC~~KTCW~~lp~F~~vg~~Lk~kY~~A~~V 261 (366)
++||++|||+ +|..+|++++||||||+|||+||.++|+++||||||||||++||||++||+|++||+.||+||++|++|
T Consensus 119 ~~fsr~F~D~-~e~~~d~r~lmnlHNn~aGR~~v~~~m~~~CKCHGvSGSCt~KTCW~~lp~Fr~VG~~LK~kyd~A~~V 197 (316)
T 4f0a_B 119 ERISKLFVDG-LETGQDARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKL 197 (316)
T ss_dssp HHHHHHHHHH-HCCSSSHHHHHHHHHHHHHHHHHHHTCEEEEEECSGGGCTTSEEEEEECCCHHHHHHHHHHHHHTCEEC
T ss_pred HHHHHHHhcc-ccccccHHHHHHhhchHHHHHHHHhcCeeeeecCCccccccceehcccCCCHHHHHHHHHHHhhhheEe
Confidence 9999999999 898899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCC----C---CcccCCCCCCCCCCCCeEEecCCCCccccCCCCCCCCCCCCcccCCCCCC-----CCCcccc--cC
Q psy12572 262 VPSNDG----H---SFVPISKTVKPPDKMDLVYSEISPNFCTENKTTGSLGTYGRECTMNSSAT-----ESCSHMC--CG 327 (366)
Q Consensus 262 ~~~~~~----~---~~~~~~~~~~~~~~~dLVY~~~SPdyC~~n~~~Gs~GT~GR~Cn~ts~~~-----~~C~~LC--CG 327 (366)
.+.+.. + .+.|....+++|.++||||||+|||||++|+++||+||+||+||++|.|+ |||++|| ||
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~k~p~~~dLVYle~SPdfC~~n~~~Gs~GT~GR~Cn~tS~g~s~~~~dgCdlLC~~CG 277 (316)
T 4f0a_B 198 EMDKRKMRSGNSADNRGAIADAFSSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGKNLSQWERRSCKRLCTDCG 277 (316)
T ss_dssp CC-------------CHHHHHHHHTSCSSSCEECSCCCCTTSEETTTTEECSTTCEECCCCTTCCHHHHTHHHHHTGGGT
T ss_pred eecccccccccccccccccccccCCCCCCCeEEeCCCCcccccCCCCCCCCCCCcccCCCCCCCcCCCCCCHHHHHHhcC
Confidence 876531 1 12222233577899999999999999999999999999999999999999 9999999 99
Q ss_pred CCceEEEEEEEEeeCceeEeeeEEeCccccEEEEEEeeC
Q psy12572 328 RGYKTDENIEYVRCNCSFKFCCDVVCDTCAKKTFIHHCL 366 (366)
Q Consensus 328 RGy~t~~~~~~e~C~CkF~WCC~V~C~~C~~~~~~~~C~ 366 (366)
|||+|++++++|+|||||||||+|+|++|.+++++|+|.
T Consensus 278 RGy~t~~~~~~erC~CkF~WCC~V~C~~C~~~~~~~~C~ 316 (316)
T 4f0a_B 278 LRVEEKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFCA 316 (316)
T ss_dssp CCEEEEEEEEEEECSCBCCSSSCCBCCEEEEEEEEEEEC
T ss_pred CceeEEEEEEEEeeCCEEEeeeEEECCcCCeEEEEEEeC
Confidence 999999999999999999999999999999999999994
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00