Psyllid ID: psy12587
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 390 | 2.2.26 [Sep-21-2011] | |||||||
| Q9H553 | 416 | Alpha-1,3/1,6-mannosyltra | yes | N/A | 0.969 | 0.908 | 0.462 | 3e-90 | |
| Q9DBE8 | 415 | Alpha-1,3/1,6-mannosyltra | yes | N/A | 0.969 | 0.910 | 0.462 | 2e-88 | |
| Q7KWM5 | 420 | Alpha-1,3/1,6-mannosyltra | yes | N/A | 0.976 | 0.907 | 0.413 | 4e-77 | |
| O94738 | 455 | Alpha-1,3/1,6-mannosyltra | N/A | N/A | 0.907 | 0.778 | 0.392 | 1e-70 | |
| Q59LF2 | 428 | Alpha-1,3/1,6-mannosyltra | N/A | N/A | 0.951 | 0.866 | 0.383 | 3e-64 | |
| Q6CWQ0 | 503 | Alpha-1,3/1,6-mannosyltra | yes | N/A | 0.951 | 0.737 | 0.384 | 6e-64 | |
| Q6BVA4 | 476 | Alpha-1,3/1,6-mannosyltra | yes | N/A | 0.920 | 0.754 | 0.370 | 1e-61 | |
| Q6FJJ9 | 458 | Alpha-1,3/1,6-mannosyltra | yes | N/A | 0.928 | 0.790 | 0.363 | 3e-59 | |
| Q8X0H8 | 471 | Alpha-1,3/1,6-mannosyltra | N/A | N/A | 0.961 | 0.796 | 0.341 | 4e-59 | |
| Q96WW6 | 506 | Alpha-1,3/1,6-mannosyltra | yes | N/A | 0.825 | 0.636 | 0.380 | 4e-58 |
| >sp|Q9H553|ALG2_HUMAN Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Homo sapiens GN=ALG2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 332 bits (851), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 183/396 (46%), Positives = 256/396 (64%), Gaps = 18/396 (4%)
Query: 2 LGATARLTITAT----AWGATGPRTTAH---DHCFKETKDGTLPVKVIGDWLPRNIF--G 52
+G RL + A A G + TAH HCF E+++ LPV+ GDWLPR + G
Sbjct: 26 VGGAERLVLDAALALQARGCSVKIWTAHYDPGHCFAESRE--LPVRCAGDWLPRGLGWGG 83
Query: 53 KFYALCMYLRMIVIALYVAWYS-EKPDLVFCDLVSICIPI--LQAKQFKVLFYCHYPDQL 109
+ A+C Y+RM+ +ALYV + + E+ D+V CD VS CIP+ L ++ K+LFYCH+PD L
Sbjct: 84 RGAAVCAYVRMVFLALYVLFLADEEFDVVVCDQVSACIPVFRLARRRKKILFYCHFPDLL 143
Query: 110 LSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSV 169
L+K+ SFLK +YR P++ +EE+TT AD I+VNS+FT +V + TF+SL H D+LYPS+
Sbjct: 144 LTKRDSFLKRLYRAPIDWIEEYTTGMADCILVNSQFTAAVFKETFKSLSHIDPDVLYPSL 203
Query: 170 YTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKT 229
+ PE +++++ P + + LSINRYERKKNL LA+ +L LR RL+ +
Sbjct: 204 NVTSFDSVVPEKLDDLV---PKGKKFLLLSINRYERKKNLTLALEALVQLRGRLTSQDWE 260
Query: 230 HVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIY 289
V L+VAGGYD +ENVE+Y+EL +V++ L V FL S SD KISL C C++Y
Sbjct: 261 RVHLIVAGGYDERVLENVEHYQELKKMVQQSDLGQYVTFLRSFSDKQKISLLHSCTCVLY 320
Query: 290 TPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDND 349
TPSNEHFGIVP+EAM+ + PVIAVNSGGP ES+ TGFLCE + F++A++K + +
Sbjct: 321 TPSNEHFGIVPLEAMYMQCPVIAVNSGGPLESIDHSVTGFLCEPDPVHFSEAIEKFI-RE 379
Query: 350 GNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNML 385
++ G R EKFS +AF+ QL V +L
Sbjct: 380 PSLKATMGLAGRARVKEKFSPEAFTEQLYRYVTKLL 415
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Mannosylates Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. Homo sapiens (taxid: 9606) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 5EC: 7 |
| >sp|Q9DBE8|ALG2_MOUSE Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Mus musculus GN=Alg2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 326 bits (835), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/396 (46%), Positives = 256/396 (64%), Gaps = 18/396 (4%)
Query: 2 LGATARLTITAT----AWGATGPRTTAH---DHCFKETKDGTLPVKVIGDWLPRNIF--G 52
+G RL + A +G TAH +HCF ET++ L V+ GDWLPR++ G
Sbjct: 26 IGGAERLVLDAALALQEYGCDVKIWTAHYDPNHCFIETRE--LSVQCAGDWLPRSLGWGG 83
Query: 53 KFYALCMYLRMIVIALYVAWYS-EKPDLVFCDLVSICIPI--LQAKQFKVLFYCHYPDQL 109
+ A+C Y+RM+ +ALYV + S E+ D+V CD VS CIP+ L ++ +VLFYCH+PD L
Sbjct: 84 RGAAICSYVRMVFLALYVLFLSGEEFDVVVCDQVSACIPVFKLARRRKRVLFYCHFPDLL 143
Query: 110 LSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSV 169
L+++ S LK YR P++ +EE+TT AD+I+VNS++T SV + TF++L H+ D+LYPS+
Sbjct: 144 LTQRNSALKKFYRAPIDWIEEYTTGMADRILVNSQYTASVFKETFKTLSHRNPDVLYPSL 203
Query: 170 YTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKT 229
+ PE I++++ P + +FLSINRYERKKNL LA+ SL LR+RL +
Sbjct: 204 NIGSFDLAIPEKIDDLV---PKGKQFLFLSINRYERKKNLPLALRSLVQLRNRLPSQEWD 260
Query: 230 HVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIY 289
V L +AGGYD ENVE+YKEL +V++ L +V FL S SD KISL C C++Y
Sbjct: 261 KVHLFMAGGYDDRIPENVEHYKELKKMVQESDLERHVTFLRSFSDRQKISLLHGCLCVLY 320
Query: 290 TPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDND 349
TPSNEHFGIVP+EAM+ + PVIAVN+GGP ES+V TGFLCE + F++AM+K + +
Sbjct: 321 TPSNEHFGIVPLEAMYMQCPVIAVNNGGPLESIVHKVTGFLCEPDPVHFSEAMEKFI-HK 379
Query: 350 GNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNML 385
++ G R EKFS AF+ QL V ++
Sbjct: 380 PSLKATMGLAGKARVAEKFSADAFADQLYQYVTKLV 415
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Mannosylates Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 7 |
| >sp|Q7KWM5|ALG2_DICDI Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Dictyostelium discoideum GN=alg2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 288 bits (737), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 167/404 (41%), Positives = 247/404 (61%), Gaps = 23/404 (5%)
Query: 2 LGATARLTIT-ATAWGATGPR-----TTAHD--HCFKETKDGTLPVKVIGDWLPRNIFGK 53
+G RL + A + G T+ HD CFKET +G L V V G + PR+IF +
Sbjct: 19 IGGAERLIVDLALGLKSVGNNRITMYTSRHDPKRCFKETSNGELDVHVTGGYFPRHIFNR 78
Query: 54 FYALCMYLRMIVIALYVAWYS-EKPDLVFCDLVSICIPILQA-KQFKVLFYCHYPDQLLS 111
F +C +R ++ ALY+ ++S +K D++ D +S IP+ + KVLFYCH+PD+LL+
Sbjct: 79 FMVICAIIRNLLAALYIIFFSGQKYDVIVLDQISASIPLFKLFTNSKVLFYCHFPDKLLT 138
Query: 112 KQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYT 171
+ S +K +YR P++ EE+TT AD+++VNS FT S+ + +F+ L + +LYP + T
Sbjct: 139 SRTSLIKRLYRIPIDLFEEFTTGCADQVLVNSNFTSSIYKQSFKHLKNSP-SVLYPIINT 197
Query: 172 EGLEKT------TPEPIEN-VLNPLPGKEDIVFLSINRYERKKNLELAIYS----LNSLR 220
+KT + +PIEN ++NP+ + FLSINRYERKK+L+LA+ + +++
Sbjct: 198 NEFDKTKQSHNFSNQPIENNLINPIKLDDKKFFLSINRYERKKDLKLALDAFSVFISNSE 257
Query: 221 SRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISL 280
S S + K + LV AGGYD ENVE+ +EL K+ L + V+FL + ++ K L
Sbjct: 258 SGGSGKGKDEIYLVFAGGYDTGLKENVEHLQELKDKAKEYGLENRVIFLITINEEQKQWL 317
Query: 281 FKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAK 340
C C+IYTPS EHFGI P+E M+ +PVIAVN+GGP E+VVDG+TG+LC + FA
Sbjct: 318 LLNCCCLIYTPSFEHFGITPLEGMYAGKPVIAVNNGGPLETVVDGKTGYLCNPTVKDFAN 377
Query: 341 AMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNM 384
A KI+ ND ++ G R N+KFSF+ F+ LNTIV +
Sbjct: 378 AFNKII-NDPINSKKMGINGKQRVNDKFSFKPFAQNLNTIVKKL 420
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Mannosylates Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 7 |
| >sp|O94738|ALG2_RHIPU Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Rhizomucor pusillus GN=ALG2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 266 bits (681), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/385 (39%), Positives = 225/385 (58%), Gaps = 31/385 (8%)
Query: 22 TTAHD--HCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIV-IALYVAWYSEKPD 78
T+ HD HCF+ET+DGTL V+V GDWLPR IFG+FY LC LR V +A + W D
Sbjct: 42 TSHHDPNHCFEETRDGTLKVQVRGDWLPRTIFGRFYILCAILRQFVLVASLILWERHSYD 101
Query: 79 LVFCDLVSICIPILQA-KQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKAD 137
+ F D +S C+P+L+ K+LFYCH+PD+LL+++ S +K +YR P++K+EE TT +D
Sbjct: 102 IFFVDQLSACVPLLKWFTTAKILFYCHFPDKLLTQRNSTIKKLYRAPVDKMEELTTGMSD 161
Query: 138 KIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTP--EPIENVLNPLPGKEDI 195
I VNS FT + + +F S+ H+ ILYP + + ++ +P +L +
Sbjct: 162 LIAVNSGFTAGMFKKSFPSV-HQTPQILYPPINFDAYDRPVDRNDPTVKILE----TDKR 216
Query: 196 VFLSINRYERKKNLELAIYSLNSLRSR--LSDEMKTHVKLVVAGGYDPHNIENVEYYKEL 253
V LSINR+ERKKN+ELA+ + +L+ + + ++ + +LV+AGGYD ENVEY +EL
Sbjct: 217 VLLSINRFERKKNVELALRAFAALKIKNMVPKDVFANYRLVLAGGYDKRVRENVEYLEEL 276
Query: 254 GVLVKK-----------------LKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHF 296
L + + V+FL S +DA + L ++YTPSNEHF
Sbjct: 277 DQLATEEFGLQTFTIHPSSAAADVPADAQVVFLCSFNDAQRTFLLDQAKLLLYTPSNEHF 336
Query: 297 GIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQF 356
GI P+E M+ PVIAVN+GGP E+V + TG L S+ + +A+ ++ + N +Q
Sbjct: 337 GITPVEGMYASVPVIAVNTGGPVETVKNKETGLLLPSDPDVWAEGIRDFIIEKYN-GKQM 395
Query: 357 SQFGFNRFNEKFSFQAFSIQLNTIV 381
Q G KFS AF+ +L ++
Sbjct: 396 GQHGRQHVQSKFSLPAFADRLEAMM 420
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Mannosylates Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. Rhizomucor pusillus (taxid: 4840) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 7 |
| >sp|Q59LF2|ALG2_CANAL Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ALG2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 246 bits (627), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 161/420 (38%), Positives = 221/420 (52%), Gaps = 49/420 (11%)
Query: 2 LGATARLTITATAWGATGPRTTAHD-----------HCFKETKDGTLPVKVIGDWLPRNI 50
+G RL + A A G + HD HCF+E G L V V GD LP N+
Sbjct: 19 IGGAERLVVDA----AVGLQDFGHDIIIYTSHCDLTHCFEEVSSGQLKVSVHGDSLPTNL 74
Query: 51 FGKFYALCMYLRMIVIALYVAWYS--EKPDLVFCDLVSICIPILQA---KQFKVLFYCHY 105
FGK + LR + ++ + + D D +S CIP+L+ +VLFYCH+
Sbjct: 75 FGKLHIFFAILRQFYLVCWLIFTGTIKNYDYFIVDQLSFCIPLLKMFCNSNCQVLFYCHF 134
Query: 106 PDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDIL 165
PDQLL ++ SFLK +YR P + +EE+TT +D+IVVNS FTK + TF+ L+H ++
Sbjct: 135 PDQLLVRRTSFLKKLYRVPFDAIEEYTTGSSDQIVVNSNFTKQIFHDTFKKLNHIDPQVV 194
Query: 166 YPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSD 225
YP V TE + T V K+ FLSINR+ER KN+ELAI S +R++
Sbjct: 195 YPCVDTETIVDTNTSSNSEVSKFF--KDSPFFLSINRFERSKNIELAIKSF----ARMNK 248
Query: 226 EMKTHVK--LVVAGGYDPHNIENVEYYKELGVLVKKLKL--------------SDNVLFL 269
M T+ K LV+AGGYD ENVEY EL L +L L S +VLFL
Sbjct: 249 LMVTNKKPRLVIAGGYDSRVAENVEYLAELSTLCDELNLINFTIRGKLIMMPPSVDVLFL 308
Query: 270 TSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVV------ 323
S S K SL + ++YTP EHFGIVP+EAM K PV+A+N GGP E+VV
Sbjct: 309 PSISTQLKNSLIQQTELLLYTPPREHFGIVPLEAMLAKTPVLAINFGGPLETVVNYNGNN 368
Query: 324 -DGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVN 382
D TG+ + ++K + K + D + + + G NR KFS + + L+ I+N
Sbjct: 369 LDEATGYTETGDFTKWSKIIMKHYNLDESTKIKLGENGRNRVINKFSRKKLAQSLDNILN 428
|
Mannosylates Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 7 |
| >sp|Q6CWQ0|ALG2_KLULA Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ALG2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 244 bits (624), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 167/434 (38%), Positives = 233/434 (53%), Gaps = 63/434 (14%)
Query: 2 LGATARLTITATAW----GATGPRTTAH---DHCFKETKDGTLPVKVIGDWLPRNIFGKF 54
+G RL + A A G T+H HCF+E K+GTL V+V GD LP +IFGKF
Sbjct: 20 IGGAERLVVDAAAGLQNAGYDVTIYTSHCDKSHCFEEVKNGTLKVEVRGDALPTHIFGKF 79
Query: 55 YALCMYLRMIVIALYVAW------YSEKPDLVFCDLVSICIPILQ--AKQFKVLFYCHYP 106
LC LR LY+ W E+ D+ D +S C+P+L A KVLFYCH+P
Sbjct: 80 SILCANLRQ----LYLTWNLISTGKIEEYDVYIVDQLSSCVPLLHLNAPDSKVLFYCHFP 135
Query: 107 DQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSL--DHKCLDI 164
DQLL+++ LK +YR P + LE++T AD I+VNS FTK V TF+SL D K +
Sbjct: 136 DQLLARRDGLLKKLYRIPFDILEQFTMGVADTILVNSNFTKQVFAKTFQSLAVDPK---V 192
Query: 165 LYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLS 224
+YP V E E+ P ++++ + + +LSINRYERKKN+ELAI + + R S
Sbjct: 193 VYPCVNVEQ-EEILPLD-KDLMKKILKNNEKYYLSINRYERKKNIELAITAFAQSKQRTS 250
Query: 225 DEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSD-------------------- 264
KL ++GGYD +N EN++Y KEL L +LKL
Sbjct: 251 H------KLFISGGYDLNNSENIDYLKELETLATELKLKHVHLSYPEYSKSPDKCPSSNF 304
Query: 265 ---NVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKES 321
+LFLTS S + K L + ++YTPSNEHFGIVP+EAM PV+AV++GGP E+
Sbjct: 305 ADAQILFLTSVSSSLKELLLQSTEMLLYTPSNEHFGIVPLEAMKYGVPVLAVDTGGPLET 364
Query: 322 VVD--------GRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAF 373
VVD TG+L S+ + ++K + + VD F G R FS +A
Sbjct: 365 VVDYNETPSHIDATGWLRPSDADEWSKVLDQSVDIFEKNHSLFEVNGPKRIKYYFSREAM 424
Query: 374 SIQLNTIVNNMLDK 387
S + +++++ K
Sbjct: 425 SKNFDNTIDHIIWK 438
|
Mannosylates Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 7 |
| >sp|Q6BVA4|ALG2_DEBHA Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=ALG2 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 237 bits (604), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/397 (37%), Positives = 216/397 (54%), Gaps = 38/397 (9%)
Query: 27 HCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRM--IVIALYVAWYSEKPDLVFCDL 84
HCF+E L V+V GD+ P N+ +F+ L +R +V+AL ++ D D
Sbjct: 53 HCFEEVSSNLLDVEVYGDFFPTNVLKRFHILFAIIRQFYLVLALIFTGKIKQYDYFIVDQ 112
Query: 85 VSICIPIL---QAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVV 141
+S CIP+L + K+LFYCH+PDQLL+ +G FLK YR P + +EEWTT +D+IVV
Sbjct: 113 LSFCIPLLCCFSRPECKILFYCHFPDQLLALKGGFLKRFYRMPFDLIEEWTTGISDQIVV 172
Query: 142 NSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPI--ENVLNPLPGKEDIVFLS 199
NS+FTK + TF+ L + ++YP V T + + E V G + FLS
Sbjct: 173 NSKFTKGIFHKTFKGLKNIEPGVIYPCVDLNSATDTEEDKLMDEEVNEFFKGGK--FFLS 230
Query: 200 INRYERKKNLELAIYSLNSLRSRL----SDEMKTHVKLVVAGGYDPHNIENVEYYKELGV 255
+NR+ERKKN+ LAI S +++L S++ + +LVVAGG+DP +ENVEY +EL
Sbjct: 231 VNRFERKKNIGLAIQSFAKFKAQLPKNVSEDNRIKPRLVVAGGFDPRVLENVEYLQELNG 290
Query: 256 LVKKLKL--------------SDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPI 301
L + L L + ++LFL S + K SL K ++YTPS EHFGIVP+
Sbjct: 291 LSESLNLKCFTIRGKLLIIPPATDILFLPSIKSSLKKSLIKNAELLLYTPSFEHFGIVPV 350
Query: 302 EAMFCKRPVIAVNSGGPKESVVD-------GRTGFLCESNEEAFAKAMKKI-VDNDGNII 353
E+M K PV++ N+GGP ES+V TG+ E N+E ++K M + D
Sbjct: 351 ESMLFKTPVLSANNGGPLESIVHFTSDNIATATGYSQEPNDELWSKTMHTFYTELDEATK 410
Query: 354 QQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKKTK 390
+ + G R +E FS S + N++ +K
Sbjct: 411 LKLGENGLTRVHELFSRHQMS---EAFMQNLIQSNSK 444
|
Mannosylates Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 7 |
| >sp|Q6FJJ9|ALG2_CANGA Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ALG2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 229 bits (584), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 155/426 (36%), Positives = 234/426 (54%), Gaps = 64/426 (15%)
Query: 2 LGATARLTITATAWGATGPRTTAHD-----------HCFKETKDGTLPVKVIGDWLPRNI 50
+G RL + A A G + H+ HCF+E K+GTL V+V GD+LP ++
Sbjct: 18 IGGAERLVVDA----ALGLQEAGHEVIIYTSHCDKTHCFEEVKNGTLKVEVFGDFLPTDL 73
Query: 51 FGKFYALCMYLRMIVIA--LYVAWYSEKPDLVFCDLVSICIPILQAKQFKVLFYCHYPDQ 108
+F+ + LR + + + ++ S+ D+ D +S C+P + KVLFYCH+PDQ
Sbjct: 74 GKRFFIVFANLRQLYLTAKVVLSGRSKDKDVFIIDQLSTCVPFFKLANNKVLFYCHFPDQ 133
Query: 109 LLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPS 168
LL+ + +++KS+YR P + LE++T +D++VVNS FTKS+ + TF+ L K +++YP
Sbjct: 134 LLAIRTNWIKSLYRIPFDLLEQFTMYCSDEVVVNSNFTKSMYKKTFKYL-QKNPNVIYPC 192
Query: 169 VYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMK 228
V T+ E + + N L GK +LSINRYERKKN+ELAI + ++ S E
Sbjct: 193 VDTDT-ETLINDRDMQIGNLLVGKCPNFYLSINRYERKKNIELAIQAF----AKASVE-- 245
Query: 229 THVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLS------------------------D 264
+ LVV GGYDP ENV+Y +EL L K+L LS
Sbjct: 246 -NTNLVVCGGYDPRIHENVQYLQELTCLCKELDLSYTVNHYSDFIEDSYSVNEIEKLFGA 304
Query: 265 NVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVD 324
V+FLTS S + K L + ++YTPS EHFGIVP+EAM +PV+AVN+GGP E+VV
Sbjct: 305 KVIFLTSISSSLKEFLIQNMQLLLYTPSYEHFGIVPLEAMKYGKPVLAVNNGGPVETVVS 364
Query: 325 --------GRTGFLCESNEEAFAKAM---KKIVDNDGNIIQQFSQFGFNRFNEKFSFQAF 373
TG+L ++ + +A A+ K++++ + + F G R E FS +A
Sbjct: 365 YQKEDNEKSTTGWLRSADADEWASALIESKEVLNQNPEL---FKNNGPKRVIELFSRKAM 421
Query: 374 SIQLNT 379
+ + T
Sbjct: 422 TQEFET 427
|
Mannosylates Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 7 |
| >sp|Q8X0H8|ALG2_NEUCR Alpha-1,3/1,6-mannosyltransferase alg-2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=alg-2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 229 bits (583), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 145/424 (34%), Positives = 223/424 (52%), Gaps = 49/424 (11%)
Query: 2 LGATARLTITATAWGATGPRTTAHD-----------HCFKETKDGTLPVKVIGD-WLPRN 49
+G RL + A A G + H HCF E +DGTL V+V G+ +P +
Sbjct: 22 IGGAERLVVDA----AVGLQNRGHKVVIFTSHCDPRHCFDEARDGTLDVRVRGNSIIPPS 77
Query: 50 IFGKFYALCMYLRMIVIALYVAWYSEK-----PDLVFCDLVSICIPILQ--AKQFKVLFY 102
+ G+F LC LR + + L + + + P F D +S +P+L+ + FY
Sbjct: 78 LLGRFSILCAILRQLHLILQITLLTSELRTLSPSAFFVDQLSAGLPLLKLLVPTSPIFFY 137
Query: 103 CHYPDQLLSK-QGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHK- 160
CH+PD LL + + ++ K +YR P + EEW+ AD I VNS FTK +V T+ SL K
Sbjct: 138 CHFPDLLLVQGRQTWYKRLYRLPFDTWEEWSMGFADSIAVNSSFTKGIVSHTWPSLASKR 197
Query: 161 CLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLR 220
L++++P + ++ P ++ + LP + + LSINR+ERKK++ LAI + SL
Sbjct: 198 SLEVVHPCIDVRSTSDSSQNPNDDDKDVLPWTKTGIILSINRFERKKDIALAIKAFASL- 256
Query: 221 SRLSDEMKTHVKLVVAGGYDPHNIENVEYYKEL----------------GVLVKKLKLSD 264
S E + KL++AGGYD ENV Y+ +L +V L S
Sbjct: 257 ---SPEQRGKAKLIIAGGYDNRVHENVSYHMDLVDLAEGAPYHLKTATAKTVVSALNTSP 313
Query: 265 NV--LFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESV 322
+V LFL S + K L + ++YTPSNEHFGIVP+EAM PV+A N+GGP E+V
Sbjct: 314 DVEVLFLLSVPNTLKEILLRSAKLLVYTPSNEHFGIVPLEAMLRGVPVLAANNGGPTETV 373
Query: 323 VDGRTGFLCESNEEA-FAKAMKKIVDNDG-NIIQQFSQFGFNRFNEKFSFQAFSIQLNTI 380
V+G TG+L + N+ +AK M K+++ G +++ + G R +F+ + +L I
Sbjct: 374 VEGETGWLRDPNDVGEWAKVMDKVLNGMGEEELKRMGKKGVERVKGRFADTQMAERLEEI 433
Query: 381 VNNM 384
+ M
Sbjct: 434 IERM 437
|
Mannosylates Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 7 |
| >sp|Q96WW6|ALG2_SCHPO Alpha-1,3/1,6-mannosyltransferase alg2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=alg2 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 225 bits (574), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 134/352 (38%), Positives = 194/352 (55%), Gaps = 30/352 (8%)
Query: 2 LGATARLTITAT----AWGATGPRTTAH---DHCFKETKDGTLPVKVIGDWLPRNIFGKF 54
+G RL + A + G T+H HCF+E +DGT+ VKV GDWLP +IFG+
Sbjct: 28 IGGAERLVVDAAVGLQSLGKEVVVFTSHCDKKHCFEEIRDGTIKVKVYGDWLPSSIFGRL 87
Query: 55 YALCMYLRMIVIALYVAWYSEKPDLVFCDLVSICIPILQAKQFKVLFYCHYPDQLLSKQG 114
C LR + + + + D + D +S C+P L +LFYCH+PD+ L+K+G
Sbjct: 88 SIFCSSLRQVYLTMILLTNYMHFDAIIVDQLSTCVPFLLLASQMILFYCHFPDKYLAKRG 147
Query: 115 SFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGL 174
LK +YR P + +E + AD+IVVNS+FT SV + F + K L I++P V E
Sbjct: 148 GILKKLYRIPFDTVEAESVRLADRIVVNSKFTASVFKKAFPKI-RKPLRIVHPCVDIEAA 206
Query: 175 EKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLV 234
K P+E L P + + +S+NR+ERKK++ LAI + ++LR ++ ++ L+
Sbjct: 207 SK----PLEFQL-PEKILQRKLLISVNRFERKKDIRLAIDAFSALRDLSANRFPEYL-LL 260
Query: 235 VAGGYDPHNIENVEYYKELGVLVKKLKL----------------SDNVLFLTSPSDAAKI 278
VAGGYD EN Y KEL ++ L S NVLFL S +
Sbjct: 261 VAGGYDIRVSENRRYLKELQEFCEQKDLSYTTVKDNWDNITVAPSTNVLFLLSVPSKVRD 320
Query: 279 SLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFL 330
+L ++YTP NEHFGIVP+EAM K PV+A +GGP E+V+DG+ G+L
Sbjct: 321 ALISSSRILLYTPENEHFGIVPLEAMLRKVPVLAQTNGGPLETVIDGKNGWL 372
|
Mannosylates Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 7 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 390 | ||||||
| 383858774 | 407 | PREDICTED: alpha-1,3/1,6-mannosyltransfe | 0.992 | 0.950 | 0.494 | 1e-102 | |
| 307184501 | 406 | Alpha-1,3-mannosyltransferase ALG2 [Camp | 0.992 | 0.953 | 0.494 | 1e-102 | |
| 332022264 | 406 | Alpha-1,3-mannosyltransferase ALG2 [Acro | 0.992 | 0.953 | 0.5 | 1e-102 | |
| 380028023 | 407 | PREDICTED: alpha-1,3/1,6-mannosyltransfe | 0.982 | 0.941 | 0.492 | 1e-101 | |
| 66516093 | 407 | PREDICTED: alpha-1,3-mannosyltransferase | 0.987 | 0.945 | 0.494 | 1e-101 | |
| 322800819 | 405 | hypothetical protein SINV_09245 [Solenop | 0.987 | 0.950 | 0.5 | 2e-99 | |
| 291240515 | 401 | PREDICTED: alpha-1,3-mannosyltransferase | 0.961 | 0.935 | 0.497 | 3e-99 | |
| 350399024 | 407 | PREDICTED: alpha-1,3/1,6-mannosyltransfe | 0.935 | 0.896 | 0.512 | 5e-99 | |
| 340719035 | 407 | PREDICTED: alpha-1,3-mannosyltransferase | 0.935 | 0.896 | 0.509 | 1e-98 | |
| 195492793 | 424 | GE20359 [Drosophila yakuba] gi|194180244 | 0.979 | 0.900 | 0.460 | 2e-97 |
| >gi|383858774|ref|XP_003704874.1| PREDICTED: alpha-1,3/1,6-mannosyltransferase ALG2-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/396 (49%), Positives = 267/396 (67%), Gaps = 9/396 (2%)
Query: 2 LGATARLTITAT-AWGATGPR----TTAHD--HCFKETKDGTLPVKVIGDWLPRNIFGKF 54
+G RL + A A G TT HD HCF ETKDGT+PV V+GDWLPR+IFG+F
Sbjct: 13 IGGAERLVVDAALALKKNGHEVNFVTTHHDPEHCFSETKDGTIPVTVVGDWLPRHIFGRF 72
Query: 55 YALCMYLRMIVIALYVAWYSEKPDLVFCDLVSICIPILQAKQFKVLFYCHYPDQLLSKQG 114
+AL Y+RMI A Y+ + +++PD+VFCDLVS+CIPIL+ + ++FYCH+PDQLLS+
Sbjct: 73 FALFAYIRMIYAASYIIFCTKRPDIVFCDLVSVCIPILRLRIPSIIFYCHHPDQLLSQPE 132
Query: 115 SFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGL 174
K +YR PLN LEE TT A KI VNS +T++V + TF+ L H ++LYPS+ T
Sbjct: 133 GISKQLYRAPLNYLEEVTTGMAHKIFVNSIYTRNVFKDTFKRL-HVEPEVLYPSINTNFF 191
Query: 175 EKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLV 234
+KT +E VL+ + I+ LSINRYERKKNL+LAI +L L LS+E V L+
Sbjct: 192 DKTRVVSLERVLDKKLPADSIILLSINRYERKKNLDLAINALAELEKYLSEEEYKKVYLI 251
Query: 235 VAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNE 294
+AGGYD ENVEYY EL L +L +SD ++FL SPSD K+S+ + C ++YTP NE
Sbjct: 252 MAGGYDKRVEENVEYYLELMGLADELNVSDKMIFLRSPSDIDKVSVLQHCTILLYTPPNE 311
Query: 295 HFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQ 354
HFGIVP+EAM+ ++PVIA NSGGPKES++ G G+L + + +AFA + ++ N N ++
Sbjct: 312 HFGIVPLEAMYSEKPVIAHNSGGPKESIISGVNGYLVDLSGDAFASKIADLIKNPIN-VK 370
Query: 355 QFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKKTK 390
+F + G +RF + FSF AFS QLN V N+++ K
Sbjct: 371 EFGKAGKDRFMKTFSFSAFSAQLNQAVENLINSDKK 406
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307184501|gb|EFN70890.1| Alpha-1,3-mannosyltransferase ALG2 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/396 (49%), Positives = 263/396 (66%), Gaps = 9/396 (2%)
Query: 2 LGATARLTITAT-AWGATGPR----TTAHD--HCFKETKDGTLPVKVIGDWLPRNIFGKF 54
+G RL + A A G TT HD HCF ET+DGT+PV V+G WLPR+I G+F
Sbjct: 13 IGGAERLVVDAALALKKNGHDVNFVTTHHDPDHCFSETRDGTIPVTVVGTWLPRHILGRF 72
Query: 55 YALCMYLRMIVIALYVAWYSEKPDLVFCDLVSICIPILQAKQFKVLFYCHYPDQLLSKQG 114
YA C YLRMI A Y+ + +P++VFCDLVS+CIP+L+ + V+FYCH+PDQLLS+ G
Sbjct: 73 YAFCAYLRMIYAASYIIFCDRRPEVVFCDLVSVCIPVLRLRIPYVVFYCHHPDQLLSQPG 132
Query: 115 SFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGL 174
+ K +YR PLN LEE TT A K+ VNS +T SV ++TF+ L H ++LYPS+ T+
Sbjct: 133 GYSKQLYRMPLNYLEEITTGMAHKVFVNSIYTGSVFRSTFKRL-HIEPEVLYPSINTDFF 191
Query: 175 EKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLV 234
+KT ++ VL+ + IV LSINRYERKK L LAI +L L L+ E+ V L+
Sbjct: 192 DKTRIVSMDRVLDKKLPNDSIVLLSINRYERKKMLSLAIEALAELEKLLTKEIYKRVYLI 251
Query: 235 VAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNE 294
+AGGYD ENVEY+ EL L +L ++D V+FL SPSD K+S+ C +IYTP NE
Sbjct: 252 IAGGYDKRIEENVEYHLELIGLADELYVTDKVIFLRSPSDIDKVSILHHCKIVIYTPPNE 311
Query: 295 HFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQ 354
HFGIVP+EAM+ +PVIA SGGP ES+V G TGFL + + EAFA + ++ N I+
Sbjct: 312 HFGIVPLEAMYVGKPVIAHKSGGPMESIVSGETGFLVDLSAEAFASKISFLITNPDR-IE 370
Query: 355 QFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKKTK 390
F + G +RF + FSF AFS+QLN +++++ KKTK
Sbjct: 371 DFGRSGKDRFLKTFSFVAFSVQLNKAIDDLITKKTK 406
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332022264|gb|EGI62579.1| Alpha-1,3-mannosyltransferase ALG2 [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/396 (50%), Positives = 263/396 (66%), Gaps = 9/396 (2%)
Query: 2 LGATARLTITAT-AWGATGPR----TTAHD--HCFKETKDGTLPVKVIGDWLPRNIFGKF 54
+G RL + A A G TT HD HCF ETKDGT+PV V+G+WLPR+I G+F
Sbjct: 13 IGGAERLVVDAALALKKNGHDVNFVTTHHDPEHCFSETKDGTIPVTVVGNWLPRHILGRF 72
Query: 55 YALCMYLRMIVIALYVAWYSEKPDLVFCDLVSICIPILQAKQFKVLFYCHYPDQLLSKQG 114
YA C Y+RMI A Y+ + +P++VFCDLVSICI +L+ + V+FYCHYPDQLLS G
Sbjct: 73 YAFCAYIRMIYAASYIIFSDHRPEVVFCDLVSICIFVLRLRIPYVIFYCHYPDQLLSYPG 132
Query: 115 SFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGL 174
+ K +YR PLN LEE TT A KI VNS FT +V + TF+ L K +ILYPS+ T+
Sbjct: 133 GYFKQLYRMPLNYLEEITTGMAHKIFVNSCFTSNVFKNTFKRLKIKP-EILYPSINTDFF 191
Query: 175 EKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLV 234
+KT I+ V++ + I+ LS+NRYERKK L +AI +L L+ L+ E+ V L+
Sbjct: 192 DKTRIVSIDRVIDRKLPDDSIILLSVNRYERKKKLSIAIEALAELKKLLTKEVYKRVFLI 251
Query: 235 VAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNE 294
+AGGYD ENVEY+ EL L +L ++D V+FL SPSD K+S+ C +IYTP NE
Sbjct: 252 MAGGYDKRIEENVEYHLELIGLADELHVTDKVIFLRSPSDIDKVSIIHHCKIVIYTPPNE 311
Query: 295 HFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQ 354
HFGIVP+EAM+ +PVIA NSGGP ES++ G+TGFL + + EAFA + ++ N N ++
Sbjct: 312 HFGIVPLEAMYMGKPVIAHNSGGPTESIISGKTGFLVDLSGEAFATKIAYLITNP-NHLE 370
Query: 355 QFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKKTK 390
F + G RF+E FSF AFS QLN +NN+ + KTK
Sbjct: 371 DFGRSGQCRFSEIFSFAAFSAQLNKAINNLTNAKTK 406
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380028023|ref|XP_003697711.1| PREDICTED: alpha-1,3/1,6-mannosyltransferase ALG2-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/396 (49%), Positives = 260/396 (65%), Gaps = 13/396 (3%)
Query: 2 LGATARLTITATAWGATGPR-----TTAHD--HCFKETKDGTLPVKVIGDWLPRNIFGKF 54
+G RL I A G TT HD HCF ETKDGT+PV V+G+WLPR+IFG+F
Sbjct: 13 IGGAERLVIDAALALKKGGYEVNFVTTHHDPEHCFSETKDGTIPVTVVGNWLPRHIFGRF 72
Query: 55 YALCMYLRMIVIALYVAWYSEKPDLVFCDLVSICIPILQAKQFKVLFYCHYPDQLLSKQG 114
+A Y+RMI A Y+ + +PD+VFCDLVS+CIPIL+ + ++FYCHYPDQLLS+
Sbjct: 73 FAFFAYIRMIYAASYIIFCEHRPDIVFCDLVSVCIPILRLRIPYIIFYCHYPDQLLSQSE 132
Query: 115 SFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLD--ILYPSVYTE 172
K +YR PLN LEE TT A KI VNS +T SV + TF+ L C++ +LYPS+ T+
Sbjct: 133 GISKQLYRAPLNYLEELTTGMAHKIFVNSIYTLSVFKHTFKKL---CIEPEVLYPSINTD 189
Query: 173 GLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVK 232
+KT +E + + + I+ LSINRYERKKNLEL I +L L+ L++E V
Sbjct: 190 FFDKTRIISLERIFDKKLPSDSIILLSINRYERKKNLELTIEALAELQKYLTEEEYKKVY 249
Query: 233 LVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPS 292
L++AGGYD ENVEYY EL LV +L +++ V+FL SPSD KIS+ C I+YTP
Sbjct: 250 LIIAGGYDKRVEENVEYYLELIGLVDELHVTEKVIFLRSPSDVDKISILYHCKIILYTPP 309
Query: 293 NEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNI 352
NEHFGIVP+EAM+ +PVIA NSGGPKES++ G TGFL + + +AFA + ++ N
Sbjct: 310 NEHFGIVPLEAMYMSKPVIAHNSGGPKESIISGVTGFLVDLSSDAFASKIAYLIKNP-EY 368
Query: 353 IQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKK 388
IQ+F G +RF + FSF AF+ QLN + +++ K
Sbjct: 369 IQEFGNAGKDRFIKTFSFAAFNAQLNEAIEDLISSK 404
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|66516093|ref|XP_624358.1| PREDICTED: alpha-1,3-mannosyltransferase ALG2-like [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/394 (49%), Positives = 260/394 (65%), Gaps = 9/394 (2%)
Query: 2 LGATARLTITATAWGATGPR-----TTAHD--HCFKETKDGTLPVKVIGDWLPRNIFGKF 54
+G RL I A G TT HD HCF ETKDGT+P+ V+G+WLPR+IFG+F
Sbjct: 13 IGGAERLVIDAALALKKGGYEVNFVTTHHDPEHCFSETKDGTIPITVVGNWLPRHIFGRF 72
Query: 55 YALCMYLRMIVIALYVAWYSEKPDLVFCDLVSICIPILQAKQFKVLFYCHYPDQLLSKQG 114
+AL Y+RMI A Y+ + +PD+VFCDLVS+CIPIL+ + ++FYCHYPDQLLS+
Sbjct: 73 FALFAYIRMIYAASYIIFCEHRPDIVFCDLVSVCIPILRLRIPYIIFYCHYPDQLLSQSK 132
Query: 115 SFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGL 174
K +YR PLN LEE TT A KI VNS +T SV + TF+ L + ++LYPS+ T+
Sbjct: 133 GISKQLYRAPLNYLEELTTGMAHKIFVNSIYTLSVFKDTFKKL-YIEPEVLYPSINTDFF 191
Query: 175 EKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLV 234
+KT +E + + I+ LSINRYERKKNLELAI +L L+ L++E V L+
Sbjct: 192 DKTRIISLERIFDKKLPSNSIILLSINRYERKKNLELAIEALAELQKYLTEEEYKKVYLI 251
Query: 235 VAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNE 294
+AGGYD ENVEYY EL LV +L +++ V+FL SPSD KIS+ C I+YTP NE
Sbjct: 252 MAGGYDKRVEENVEYYLELIGLVDELHVTEKVIFLRSPSDIDKISILHHCKIILYTPPNE 311
Query: 295 HFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQ 354
HFGIVP+EAM+ +PVIA NSGGPKES++ G TGFL + + +AFA + ++ N IQ
Sbjct: 312 HFGIVPLEAMYMSKPVIAHNSGGPKESIISGVTGFLVDLSGDAFASKIAYLIKNP-EYIQ 370
Query: 355 QFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKK 388
+F G +RF + FSF AF+ QLN + +++ K
Sbjct: 371 EFGNAGKDRFMKTFSFAAFNAQLNEAIEDLISNK 404
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|322800819|gb|EFZ21694.1| hypothetical protein SINV_09245 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 197/394 (50%), Positives = 259/394 (65%), Gaps = 9/394 (2%)
Query: 2 LGATARLTITAT-AWGATGPR----TTAHD--HCFKETKDGTLPVKVIGDWLPRNIFGKF 54
+G RL + A A G TT +D HCF ETKDGT+PV V+G+WLPR+I G+F
Sbjct: 14 IGGAERLVVDAALALKKNGHDVNFVTTHYDLEHCFSETKDGTIPVTVVGNWLPRHILGRF 73
Query: 55 YALCMYLRMIVIALYVAWYSEKPDLVFCDLVSICIPILQAKQFKVLFYCHYPDQLLSKQG 114
YAL Y+RMI A Y+ + ++P++VFCDLVSICIPIL+ + V+FYCHYPDQLLS+ G
Sbjct: 74 YALFAYIRMIYAASYIIFCDQRPEVVFCDLVSICIPILRLRIPYVIFYCHYPDQLLSQPG 133
Query: 115 SFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGL 174
+K +YR PLN LEE TT A K+ VNS +T SV + TF+ L K +ILYPS+ T+
Sbjct: 134 GCIKQLYRIPLNYLEEITTGMAHKVFVNSNYTNSVFRNTFKRLKIKP-EILYPSINTDFF 192
Query: 175 EKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLV 234
KT +E VL+ + I+ LSINRYERKK L LAI +L L + L+ E+ V L+
Sbjct: 193 NKTRIVSLERVLDRKLPDDSIILLSINRYERKKKLSLAIEALAELENLLTKEIYKKVYLI 252
Query: 235 VAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNE 294
+AGGYD ENVEY+ EL L +L ++D V+FL SPSD KIS+ C +IYTP NE
Sbjct: 253 MAGGYDKRVEENVEYHLELIGLADELHVTDKVIFLRSPSDIDKISILHHCKIVIYTPPNE 312
Query: 295 HFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQ 354
HFGIVP+EAMF +PVIA NSGGP ES++ G TGFL + E FA + ++ N N ++
Sbjct: 313 HFGIVPLEAMFMGKPVIAHNSGGPTESIISGETGFLVDLFGEEFALKIAYLITNP-NQLE 371
Query: 355 QFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKK 388
F + G RF FSF AFS QLN ++++ D++
Sbjct: 372 NFGRSGQYRFLVTFSFAAFSAQLNKAISDLTDRQ 405
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|291240515|ref|XP_002740170.1| PREDICTED: alpha-1,3-mannosyltransferase ALG2-like [Saccoglossus kowalevskii] | Back alignment and taxonomy information |
|---|
Score = 368 bits (944), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 193/388 (49%), Positives = 258/388 (66%), Gaps = 13/388 (3%)
Query: 2 LGATARLTITAT----AWGATGPRTTAH---DHCFKETKDGTLPVKVIGDWLPRNIFGKF 54
+G RL + A + G + TAH HCFKET+DG+L V +GDWLPR+IFG
Sbjct: 13 IGGAERLVVDAALALKSQGHSVKLFTAHHDPSHCFKETQDGSLSVTCVGDWLPRSIFGGC 72
Query: 55 YALCMYLRMIVIALYVAWYSE-KPDLVFCDLVSICIPILQAKQFKVLFYCHYPDQLLSKQ 113
YALC Y+RM+ +ALY+ +S D+V CD +S CIPIL+ ++ K+LFYCH+PDQLL+K+
Sbjct: 73 YALCAYIRMMYVALYLVCFSGLHYDIVICDQISACIPILKFRKAKILFYCHFPDQLLTKR 132
Query: 114 GSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEG 173
SF+K +YR P++ LEE TT AD I+VNS+FT +TF +L H +LYPS+
Sbjct: 133 ISFMKKLYRGPIDWLEEKTTGMADCILVNSQFTGETFASTFTTLSHIKPQVLYPSLNFSA 192
Query: 174 LEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKL 233
+ P+ + + +P +FLSINRYERKKNL LAI + L+ L+D+ V L
Sbjct: 193 FDV----PVSDAGDLIPRNIRTLFLSINRYERKKNLGLAIEAFGDLKKNLADDRWGEVHL 248
Query: 234 VVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSN 293
V+AGGYD +EN E+Y EL L +KLKL+DNV FL S SD+ K++L C C++YTPSN
Sbjct: 249 VMAGGYDDRVVENKEHYLELRQLTEKLKLNDNVTFLRSFSDSEKLTLLHNCTCLLYTPSN 308
Query: 294 EHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNII 353
EHFGIVPIEAM+ KRPVIA NSGGP ES+ + TG+LC + FA+ MK+ VD DG +
Sbjct: 309 EHFGIVPIEAMYMKRPVIAANSGGPLESIDNEVTGYLCPPESKQFAEKMKRFVD-DGGLS 367
Query: 354 QQFSQFGFNRFNEKFSFQAFSIQLNTIV 381
+ + G R +KFSFQAF+ QL+ IV
Sbjct: 368 SKLGKAGHQRVIDKFSFQAFTDQLHNIV 395
|
Source: Saccoglossus kowalevskii Species: Saccoglossus kowalevskii Genus: Saccoglossus Family: Harrimaniidae Order: Class: Enteropneusta Phylum: Hemichordata Superkingdom: Eukaryota |
| >gi|350399024|ref|XP_003485389.1| PREDICTED: alpha-1,3/1,6-mannosyltransferase ALG2-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 367 bits (942), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 189/369 (51%), Positives = 247/369 (66%), Gaps = 4/369 (1%)
Query: 22 TTAHD--HCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYSEKPDL 79
TT HD HCF ETKDGT+PV V+G WLPR+I G+F+AL Y+RMI A Y+ + +PD+
Sbjct: 38 TTHHDSEHCFSETKDGTIPVTVVGSWLPRHILGRFFALFAYIRMIYAASYIVFCENRPDI 97
Query: 80 VFCDLVSICIPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKI 139
VFCDLVS CIPIL+ + ++FYCHYPDQLLS+ K +YR PLN LEE TT A KI
Sbjct: 98 VFCDLVSACIPILRLRIPYIIFYCHYPDQLLSRPEGLSKQLYRIPLNYLEEITTGMAHKI 157
Query: 140 VVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLS 199
VNS +T+SV + TF+ L + ++LYPS+ T+ +K P+E VL+ + LS
Sbjct: 158 FVNSLYTRSVFKDTFKRLTIEP-EVLYPSINTDYFDKARIIPLERVLDKKLPPNSTILLS 216
Query: 200 INRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKK 259
INRYERKKNL LAI +L L+ L +E V L++AGGYD ENVE+Y EL L +
Sbjct: 217 INRYERKKNLGLAIEALAELKKYLKEEEYKKVYLIMAGGYDKRVEENVEHYLELIGLADE 276
Query: 260 LKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPK 319
L ++D ++FL SPSD K+S+ C ++YTP NEHFGIVP+EAM+ +PVIA NSGGPK
Sbjct: 277 LNVTDKIIFLRSPSDIDKVSILYHCMVLLYTPPNEHFGIVPLEAMYMSKPVIAHNSGGPK 336
Query: 320 ESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNT 379
ESVV G TGFL + + +AFA + ++ N +QQF G RF E FS AFS QLN
Sbjct: 337 ESVVSGITGFLVDLSGDAFALKIADLIKNP-EYVQQFGDAGKVRFMETFSSAAFSAQLNK 395
Query: 380 IVNNMLDKK 388
+ +++D K
Sbjct: 396 TIEDLIDNK 404
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340719035|ref|XP_003397963.1| PREDICTED: alpha-1,3-mannosyltransferase ALG2-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 188/369 (50%), Positives = 247/369 (66%), Gaps = 4/369 (1%)
Query: 22 TTAHD--HCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYSEKPDL 79
TT HD HCF ETKDGT+PV V+G WLPR+I G+F+AL Y+RMI A Y+ + +PD+
Sbjct: 38 TTHHDSEHCFSETKDGTIPVTVVGSWLPRHILGRFFALFAYIRMIYAASYIVFCENRPDI 97
Query: 80 VFCDLVSICIPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKI 139
VFCDLVS CIPIL+ + ++FYCHYPDQLLS+ K +YR PLN LEE TT A KI
Sbjct: 98 VFCDLVSACIPILRLRIPYIIFYCHYPDQLLSRPEGLSKQLYRVPLNYLEEITTGMAHKI 157
Query: 140 VVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLS 199
VNS +T+SV + TF+ L + ++LYPS+ T+ +K P+E VL+ + LS
Sbjct: 158 FVNSLYTRSVFKDTFKRLTIEP-EVLYPSINTDYFDKARIIPLERVLDKRLPPNSTILLS 216
Query: 200 INRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKK 259
INRYERKKNL LAI +L L+ L +E V L++AGGYD ENVE+Y EL L +
Sbjct: 217 INRYERKKNLGLAIEALAQLKKYLKEEEYKKVYLIMAGGYDKRVEENVEHYLELIGLADE 276
Query: 260 LKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPK 319
L ++D ++FL SPSD K+S+ C ++YTP NEHFGIVP+EAM+ +PVIA NSGGPK
Sbjct: 277 LNVTDKIIFLRSPSDIDKVSILYHCMVLLYTPPNEHFGIVPLEAMYMSKPVIAHNSGGPK 336
Query: 320 ESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNT 379
ESVV G TGFL + + +AFA + ++ N +QQF G RF + FS AFS QLN
Sbjct: 337 ESVVSGITGFLVDLSGDAFALKIADLIKNP-EYVQQFGDAGKVRFMDTFSSAAFSAQLNK 395
Query: 380 IVNNMLDKK 388
+ +++D K
Sbjct: 396 TIEDLIDNK 404
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195492793|ref|XP_002094143.1| GE20359 [Drosophila yakuba] gi|194180244|gb|EDW93855.1| GE20359 [Drosophila yakuba] | Back alignment and taxonomy information |
|---|
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 185/402 (46%), Positives = 261/402 (64%), Gaps = 20/402 (4%)
Query: 2 LGATARLTITAT-AWGATGPR----TTAHD--HCFKETKDGTLPVKVIGDWLPRNIFGKF 54
+G RL + A A G + T HD HCFKET DGT PV V+GDWLPR +FG+F
Sbjct: 13 IGGAERLVVDAALALKERGHQVSFLTNHHDSTHCFKETADGTFPVHVVGDWLPRGLFGRF 72
Query: 55 YALCMYLRMIVIALYVAWY---SEKPDLVFCDLVSICIPILQ--AKQFKVLFYCHYPDQL 109
YA+C YLRM+ A+Y +++ E+ D+V CDL+S+CIP+L+ + KVLFYCH+PDQL
Sbjct: 73 YAICAYLRMLYAAIYASFFMPQREQVDVVVCDLISVCIPVLRFAPHRPKVLFYCHFPDQL 132
Query: 110 LSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSV 169
LS + LK +YR P+N LEE T ADK++VNS+FT V Q TFR L D+LYPS+
Sbjct: 133 LSSREGLLKRLYRLPINWLEEHTIGLADKVLVNSKFTLRVFQDTFRRLS-TVPDVLYPSL 191
Query: 170 YTEGLEKTTPEP------IENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRL 223
+T+ ++ + ++ ++P ++L INRYERKKN LA++SL L L
Sbjct: 192 HTQYFDQMQKKLEQRSALLDEPVHPRVPLNAFIYLDINRYERKKNHALALHSLRLLGDML 251
Query: 224 SDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKF 283
+L++AGGYD +ENVE++ ELG L ++LKL D+V+ L SP+D K L
Sbjct: 252 PTTDFKRCRLIIAGGYDTRCMENVEHFAELGQLTEELKLQDHVVLLRSPTDEEKCRLLFA 311
Query: 284 CHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMK 343
HC++YTP NEHFGIVP+E M+C +PV+A+NSGGP E+VV+ TGFLCE E++F AM
Sbjct: 312 AHCLLYTPENEHFGIVPLEGMYCSKPVVALNSGGPTETVVNTSTGFLCEKTEKSFGGAMH 371
Query: 344 KIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNML 385
++ ++ ++ Q G R +KFSFQAF+ +LN I+ +++
Sbjct: 372 QLFRDEQLRVKMGDQ-GHKRVQQKFSFQAFADRLNGIIRDLV 412
|
Source: Drosophila yakuba Species: Drosophila yakuba Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 390 | ||||||
| UNIPROTKB|F1NWX1 | 398 | ALG2 "Uncharacterized protein" | 0.948 | 0.929 | 0.502 | 6e-87 | |
| FB|FBgn0035401 | 424 | CG1291 [Drosophila melanogaste | 0.925 | 0.851 | 0.462 | 9.9e-87 | |
| ZFIN|ZDB-GENE-060502-2 | 455 | alg2 "asparagine-linked glycos | 0.951 | 0.815 | 0.476 | 1e-84 | |
| UNIPROTKB|F1SSE6 | 416 | ALG2 "Uncharacterized protein" | 0.969 | 0.908 | 0.462 | 3.2e-81 | |
| UNIPROTKB|A4FUG6 | 416 | ALG2 "ALG2 protein" [Bos tauru | 0.969 | 0.908 | 0.452 | 6.6e-81 | |
| UNIPROTKB|Q9H553 | 416 | ALG2 "Alpha-1,3/1,6-mannosyltr | 0.969 | 0.908 | 0.457 | 6.6e-81 | |
| UNIPROTKB|G3V6U3 | 415 | Alg2 "Asparagine-linked glycos | 0.969 | 0.910 | 0.457 | 4.7e-80 | |
| UNIPROTKB|F6X6I6 | 416 | ALG2 "Uncharacterized protein" | 0.969 | 0.908 | 0.446 | 7.6e-80 | |
| UNIPROTKB|E2R622 | 417 | ALG2 "Uncharacterized protein" | 0.969 | 0.906 | 0.443 | 3.3e-79 | |
| MGI|MGI:1914731 | 415 | Alg2 "asparagine-linked glycos | 0.969 | 0.910 | 0.454 | 3.3e-79 |
| UNIPROTKB|F1NWX1 ALG2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
Identities = 194/386 (50%), Positives = 246/386 (63%)
Query: 2 LGATARLTITAT-AWGATGPRT---TAH---DHCFKETKDGTLPVKVIGDWLPRNIFGKF 54
LG RL + A A A G R TAH CF ET+ L ++ G WLPR+++G+
Sbjct: 10 LGGAERLVVDAALALQARGCRVQVWTAHYDPGRCFAETR--RLALRCAGAWLPRSLWGRG 67
Query: 55 YALCMYLRMIVIALYVAWYS-EKPDLVFCDLVSICIPILQAKQF--KVLFYCHYPDQLLS 111
+A+C LRM +ALYV S E D CD VS CIPIL+ + KVLFYCH+PDQLL+
Sbjct: 68 HAVCAALRMAFVALYVLLLSGEHADAFICDQVSACIPILRLARTRKKVLFYCHFPDQLLT 127
Query: 112 KQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYT 171
K+ SFLK +YR PL+ LEE+TT AD IVVNS+FT SV + TF+SL H D+LYPS+ T
Sbjct: 128 KRESFLKRLYRMPLDWLEEYTTGMADCIVVNSKFTASVFKETFKSLSHINPDVLYPSLNT 187
Query: 172 EGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHV 231
E P I +++ P K +FLSINRYERKKNL LA+ +L+ LR RL + V
Sbjct: 188 SSFETVVPVDIADLI---PKKTKFLFLSINRYERKKNLALALEALHELRGRLDSHQWSEV 244
Query: 232 KLVVAGGYDPHNIENVEYYXXXXXXXXXXXXSDNVLFLTSPSDAAKISLFKFCHCIIYTP 291
LV+AGGYD +ENVE+Y SD+V FL S +D K+SL C C++YTP
Sbjct: 245 HLVMAGGYDKRVLENVEHYEELRGIAAKLNVSDHVTFLRSFTDEQKVSLLNNCVCVLYTP 304
Query: 292 SNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGN 351
SNEHFGIVP+EAM+ +RPVIAVNSGGP ES+++ TGFLC+ F++AM+KIV D
Sbjct: 305 SNEHFGIVPLEAMYMRRPVIAVNSGGPLESILNNVTGFLCDPLPTQFSEAMEKIV-RDPL 363
Query: 352 IIQQFSQFGFNRFNEKFSFQAFSIQL 377
+ G RF EKFS +AFS QL
Sbjct: 364 LKDSMGAAGRVRFMEKFSSEAFSEQL 389
|
|
| FB|FBgn0035401 CG1291 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
Identities = 175/378 (46%), Positives = 246/378 (65%)
Query: 22 TTAHD--HCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS---EK 76
T HD HCFKET DGT PV V+GDWLPR +FG+FYA+C YLRM+ A+Y +++ E+
Sbjct: 38 TNHHDSTHCFKETADGTFPVHVVGDWLPRGLFGRFYAICAYLRMLYAAIYASFFMPQREQ 97
Query: 77 PDLVFCDLVSICIPILQAKQF--KVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTC 134
D+V CDL+S+CIP+L+ KVLFYCH+PDQLLS + LK +YR P+N LEE T
Sbjct: 98 VDVVVCDLISVCIPVLRFAPHRPKVLFYCHFPDQLLSSREGLLKRLYRLPINWLEEHTIG 157
Query: 135 KADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTE---GLEKTTPEP---IENVLNP 188
ADK++VNS+FT V Q TFR L D+LYPS++T+ ++K + ++ ++P
Sbjct: 158 LADKVLVNSKFTLRVFQDTFRRLS-TVPDVLYPSLHTQYFDQMQKKLEQRSALLDEPVHP 216
Query: 189 LPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRL-SDEMKTHVKLVVAGGYDPHNIENV 247
++L INRYERKKN LA++SL L L + E K +L++AGGYD +ENV
Sbjct: 217 RVPLNAFIYLDINRYERKKNHALALHSLRLLGDMLPATEFK-RCRLIIAGGYDTRCMENV 275
Query: 248 EYYXXXXXXXXXXXXSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCK 307
E++ D+V+ L SP+D K L HC++YTP NEHFGIVP+E M+C
Sbjct: 276 EHFAELEHLTEELKLQDHVVLLRSPTDEEKCRLLFAAHCLLYTPENEHFGIVPLEGMYCS 335
Query: 308 RPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEK 367
+PV+A+NSGGP E+VV+ TGFLCE E++F AM ++ ++ ++ Q G R +K
Sbjct: 336 KPVVALNSGGPTETVVNTSTGFLCEKTEKSFGGAMLQLFRDEQLRVKMGDQ-GHKRVQQK 394
Query: 368 FSFQAFSIQLNTIVNNML 385
FSFQAF+ +LN I+ +++
Sbjct: 395 FSFQAFADRLNGIIRDLV 412
|
|
| ZFIN|ZDB-GENE-060502-2 alg2 "asparagine-linked glycosylation 2 homolog (S. cerevisiae, alpha-1,3-mannosyltransferase)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 848 (303.6 bits), Expect = 1.0e-84, P = 1.0e-84
Identities = 184/386 (47%), Positives = 243/386 (62%)
Query: 2 LGATARLTITAT----AWGATGPRTTAH---DHCFKETKDGTLPVKVIGDWLPRNIFGKF 54
+G RL + A + G + TAH HCF ET LPV +GDWLP ++FG F
Sbjct: 66 IGGAERLVVDAAVALRSRGCSVQIWTAHYDPQHCFSETLSPDLPVVCVGDWLPTSVFGYF 125
Query: 55 YALCMYLRMIVIALYVAWYS-EKPDLVFCDLVSICIPILQ-AKQFK-VLFYCHYPDQLLS 111
+ALC YLRMI + +Y+ +S E+ D+VFCD VS CIP L+ A+Q K VLFYCH+PDQLL+
Sbjct: 126 HALCAYLRMIYLTIYLVLFSGEEFDVVFCDQVSACIPFLRLARQRKKVLFYCHFPDQLLT 185
Query: 112 KQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYT 171
++ S LK +YR P++ EE TT AD+I+VNS+FT V + TF L D+LYPS+ +
Sbjct: 186 QRRSALKRLYRGPIDWFEELTTGMADRILVNSQFTAKVFKQTFPKLSEIHTDVLYPSLNS 245
Query: 172 EGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHV 231
+ + +E + LP ++LSINRYERKKNL LA+ +L +L+ RLS V
Sbjct: 246 SAFD----DEVEGLGGLLPEGRSFIYLSINRYERKKNLPLALQALANLKDRLSVGEWERV 301
Query: 232 KLVVAGGYDPHNIENVEYYXXXXXXXXXXXXSDNVLFLTSPSDAAKISLFKFCHCIIYTP 291
LV+AGGYD +ENVE+Y D+V FL S SD K+SL C++YTP
Sbjct: 302 HLVMAGGYDERVVENVEHYEELRSLVTSLGLEDHVTFLRSFSDKQKLSLLHNSTCVLYTP 361
Query: 292 SNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGN 351
SNEHFGIVPIE+M+ + PVIAVNSGGP ESV TGFLCE E F++AM+ V +D
Sbjct: 362 SNEHFGIVPIESMYLRCPVIAVNSGGPLESVAHEETGFLCEPTPERFSEAMQNFV-SDPK 420
Query: 352 IIQQFSQFGFNRFNEKFSFQAFSIQL 377
+ Q+ Q G R ++FS QAF+ QL
Sbjct: 421 LKQRMGQAGRERVQQRFSMQAFTEQL 446
|
|
| UNIPROTKB|F1SSE6 ALG2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 183/396 (46%), Positives = 253/396 (63%)
Query: 2 LGATARLTITAT----AWGATGPRTTAH-D--HCFKETKDGTLPVKVIGDWLPRNIF--G 52
+G RL + A A G + TAH D HCF E+++ LPV+ GDWLPR++ G
Sbjct: 26 VGGAERLVLDAALALQARGCSVKIWTAHYDPGHCFAESRE--LPVRCAGDWLPRSLGWGG 83
Query: 53 KFYALCMYLRMIVIALYVAWYSEKP-DLVFCDLVSICIPI--LQAKQFKVLFYCHYPDQL 109
+ A+C YLRMI +ALYV + S++ D+V CD VS CIP+ L ++ K+LFYCH+PD L
Sbjct: 84 RGGAVCAYLRMIYLALYVLFLSDEEFDVVVCDQVSACIPVFKLARRRKKILFYCHFPDLL 143
Query: 110 LSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSV 169
L+K+ SF+K +YR P++ +EE+TT AD I+VNS FT ++ + TF+SL H D+L PS+
Sbjct: 144 LTKRDSFIKRLYRAPIDWIEEYTTGMADCILVNSRFTAAIFKETFKSLSHIDPDVLSPSL 203
Query: 170 YTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKT 229
+ PE +++++ P GK+ +FLSINRYERKKNL LA+ +L LR RLS +
Sbjct: 204 NITNFDGADPEKLDDLV-P-KGKK-YLFLSINRYERKKNLTLALEALVKLRERLSSQDWD 260
Query: 230 HVKLVVAGGYDPHNIENVEYYXXXXXXXXXXXXSDNVLFLTSPSDAAKISLFKFCHCIIY 289
V L++AGGYD +ENV++Y V FL S SD KISL C C++Y
Sbjct: 261 KVHLIMAGGYDERVLENVQHYQELKKMVQQSDLGQYVTFLRSCSDKQKISLLHGCTCVLY 320
Query: 290 TPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDND 349
TPSNEHFGIVP+EAM+ + PVIAVNSGGP ES+V G TGFLCE + F++A++K + ++
Sbjct: 321 TPSNEHFGIVPLEAMYMQCPVIAVNSGGPLESIVHGVTGFLCEPDPVHFSEAIEKFI-HE 379
Query: 350 GNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNML 385
++ G R EKFS +AF QL V +L
Sbjct: 380 PSLKATMGLAGRARVKEKFSPEAFEEQLYQYVTKLL 415
|
|
| UNIPROTKB|A4FUG6 ALG2 "ALG2 protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 179/396 (45%), Positives = 253/396 (63%)
Query: 2 LGATARLTITAT----AWGATGPRTTAH-D--HCFKETKDGTLPVKVIGDWLPRNIF--G 52
+G RL + A A G + TAH D HCF E+++ L V GDWLPR++ G
Sbjct: 26 VGGAERLVLDAALALQARGCSVKIWTAHYDPGHCFAESRE--LSVHCAGDWLPRSLGWGG 83
Query: 53 KFYALCMYLRMIVIALYVAWYSEKP-DLVFCDLVSICIPI--LQAKQFKVLFYCHYPDQL 109
+ A+C Y+RMI +ALYV + ++ D+V CD VS CIP+ L ++ K+LFYCH+PD L
Sbjct: 84 RGAAVCAYVRMIFLALYVLFLGDEEFDVVVCDQVSACIPVFKLARRRKKILFYCHFPDLL 143
Query: 110 LSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSV 169
L+++ SF+K +YR P++ +EE+TT AD I+VNS FT ++ + TF+SL H +LYPS+
Sbjct: 144 LTRRDSFIKRLYRAPIDWVEEYTTGMADCILVNSRFTAAIFKETFKSLSHIDPAVLYPSL 203
Query: 170 YTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKT 229
+ PE +++++ P GK+ +FLSINRYERKKNL LA+ +L LR RL+ +
Sbjct: 204 NIVSFDSAIPEKLDDIV-P-QGKK-FIFLSINRYERKKNLTLAVEALVKLRGRLTSQDWD 260
Query: 230 HVKLVVAGGYDPHNIENVEYYXXXXXXXXXXXXSDNVLFLTSPSDAAKISLFKFCHCIIY 289
V L++AGGYD +ENV++Y V FL S SD KISL + C C++Y
Sbjct: 261 KVHLIIAGGYDERVLENVQHYQELKQVVQQSDLGQYVTFLRSCSDKQKISLLRGCTCVLY 320
Query: 290 TPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDND 349
TPSNEHFGIVP+EAM+ + PVIAVNSGGP ESVV TGFLC+ + E F++A++K + ++
Sbjct: 321 TPSNEHFGIVPLEAMYMQCPVIAVNSGGPLESVVHSVTGFLCDPDPEHFSEAIEKFI-HE 379
Query: 350 GNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNML 385
++ G NR EKFS +AF+ QL V +L
Sbjct: 380 PSLKATMGLAGRNRVKEKFSPEAFTEQLYQYVTKLL 415
|
|
| UNIPROTKB|Q9H553 ALG2 "Alpha-1,3/1,6-mannosyltransferase ALG2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 181/396 (45%), Positives = 251/396 (63%)
Query: 2 LGATARLTITAT----AWGATGPRTTAH-D--HCFKETKDGTLPVKVIGDWLPRNIF--G 52
+G RL + A A G + TAH D HCF E+++ LPV+ GDWLPR + G
Sbjct: 26 VGGAERLVLDAALALQARGCSVKIWTAHYDPGHCFAESRE--LPVRCAGDWLPRGLGWGG 83
Query: 53 KFYALCMYLRMIVIALYVAWYSEKP-DLVFCDLVSICIPI--LQAKQFKVLFYCHYPDQL 109
+ A+C Y+RM+ +ALYV + +++ D+V CD VS CIP+ L ++ K+LFYCH+PD L
Sbjct: 84 RGAAVCAYVRMVFLALYVLFLADEEFDVVVCDQVSACIPVFRLARRRKKILFYCHFPDLL 143
Query: 110 LSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSV 169
L+K+ SFLK +YR P++ +EE+TT AD I+VNS+FT +V + TF+SL H D+LYPS+
Sbjct: 144 LTKRDSFLKRLYRAPIDWIEEYTTGMADCILVNSQFTAAVFKETFKSLSHIDPDVLYPSL 203
Query: 170 YTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKT 229
+ PE +++++ P GK+ + LSINRYERKKNL LA+ +L LR RL+ +
Sbjct: 204 NVTSFDSVVPEKLDDLV-P-KGKK-FLLLSINRYERKKNLTLALEALVQLRGRLTSQDWE 260
Query: 230 HVKLVVAGGYDPHNIENVEYYXXXXXXXXXXXXSDNVLFLTSPSDAAKISLFKFCHCIIY 289
V L+VAGGYD +ENVE+Y V FL S SD KISL C C++Y
Sbjct: 261 RVHLIVAGGYDERVLENVEHYQELKKMVQQSDLGQYVTFLRSFSDKQKISLLHSCTCVLY 320
Query: 290 TPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDND 349
TPSNEHFGIVP+EAM+ + PVIAVNSGGP ES+ TGFLCE + F++A++K + +
Sbjct: 321 TPSNEHFGIVPLEAMYMQCPVIAVNSGGPLESIDHSVTGFLCEPDPVHFSEAIEKFI-RE 379
Query: 350 GNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNML 385
++ G R EKFS +AF+ QL V +L
Sbjct: 380 PSLKATMGLAGRARVKEKFSPEAFTEQLYRYVTKLL 415
|
|
| UNIPROTKB|G3V6U3 Alg2 "Asparagine-linked glycosylation 2 homolog (Yeast, alpha-1,3-mannosyltransferase), isoform CRA_a" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
Identities = 181/396 (45%), Positives = 250/396 (63%)
Query: 2 LGATARLTITATA----WGATGPRTTAH---DHCFKETKDGTLPVKVIGDWLPRNIF--G 52
+G RL + A +G TAH +HCF ET++ L V+ GDWLPR++ G
Sbjct: 26 IGGAERLVLDAALALQEYGCQVKIWTAHYDPNHCFIETRE--LSVQCAGDWLPRSLGWGG 83
Query: 53 KFYALCMYLRMIVIALYVAWYS-EKPDLVFCDLVSICIPI--LQAKQFKVLFYCHYPDQL 109
+ A+C Y+RM+ +ALYV + S E+ D+V CD VS CIP+ L ++ +VLFYCH+PD L
Sbjct: 84 RGAAICSYVRMVFLALYVLFLSGEEFDVVVCDQVSACIPVFKLARRRKRVLFYCHFPDLL 143
Query: 110 LSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSV 169
L+++ S LK YR P++ +EE+TT AD+I+VNS++T SV + TF++L H+ D+LYPS+
Sbjct: 144 LTQRNSSLKKFYRAPIDWIEEYTTGMADRILVNSQYTASVFKETFKTLSHRNPDVLYPSL 203
Query: 170 YTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKT 229
+ PE I++++ P GK+ +FLSINRYERKKNL LA+ SL LR+RL +
Sbjct: 204 NIGSFDLAVPEKIDDLV-P-KGKQ-FLFLSINRYERKKNLPLALSSLVQLRARLPPQEWE 260
Query: 230 HVKLVVAGGYDPHNIENVEYYXXXXXXXXXXXXSDNVLFLTSPSDAAKISLFKFCHCIIY 289
V L +AGGYD +ENVE+Y +V FL S SD KISL C C++Y
Sbjct: 261 KVHLFMAGGYDDRVLENVEHYKELKKIVQESDLERHVTFLRSFSDRQKISLLHGCLCVLY 320
Query: 290 TPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDND 349
TPSNEHFGIVP+EAM+ + PVIAVNSGGP ES+V TGFLCE + F++AM+K +
Sbjct: 321 TPSNEHFGIVPLEAMYMQCPVIAVNSGGPLESIVHKVTGFLCEPDPVHFSEAMEKFIHKP 380
Query: 350 GNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNML 385
++ G R EKFS AF+ QL V ++
Sbjct: 381 -SLKATMGLAGKARVAEKFSADAFADQLYQYVTKLV 415
|
|
| UNIPROTKB|F6X6I6 ALG2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 177/396 (44%), Positives = 253/396 (63%)
Query: 2 LGATARLTITAT----AWGATGPRTTAH-D--HCFKETKDGTLPVKVIGDWLPRNIF--G 52
+G RL + A A G + TAH D HCF +++ L V+ GDWLPR++ G
Sbjct: 26 VGGAERLVLDAALALQARGCSVKLWTAHYDPGHCFADSRG--LQVRCAGDWLPRSLGWGG 83
Query: 53 KFYALCMYLRMIVIALYVAWYSEKP-DLVFCDLVSICIPILQA--KQFKVLFYCHYPDQL 109
+ A+C Y+RM+ +ALYV + ++ D+V CD VS CIP+L+ ++ K+LFYCH+PD L
Sbjct: 84 RGAAVCAYVRMVFLALYVLFLGDEEFDVVVCDQVSACIPVLKLARRRKKILFYCHFPDLL 143
Query: 110 LSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSV 169
L+++ SFLK +YR P++ +EE+TT AD I+VNS FT ++ + TF+SL H D+LYPS+
Sbjct: 144 LTRRDSFLKRLYRAPIDWIEEYTTGMADCILVNSRFTAAIFKETFKSLSHIEPDVLYPSL 203
Query: 170 YTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKT 229
+ T PE +++++ P GK+ +FLSINRYERKKNL LA+ +L LR RL+ +
Sbjct: 204 NVTSFDSTAPEKLDDLV-P-EGKK-FLFLSINRYERKKNLTLALEALVKLRGRLTSQDWD 260
Query: 230 HVKLVVAGGYDPHNIENVEYYXXXXXXXXXXXXSDNVLFLTSPSDAAKISLFKFCHCIIY 289
V L++AGGYD +ENV++Y + V FL S SD KISL C C++Y
Sbjct: 261 KVHLIMAGGYDERVLENVDHYQELKKMVQQSDLAQCVTFLRSFSDKQKISLLHGCTCVLY 320
Query: 290 TPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDND 349
TPS+EHFGIVP+EAM+ + PVIAVNSGGP ES+ G TGFLCE + F++AM+K + ++
Sbjct: 321 TPSHEHFGIVPLEAMYMQCPVIAVNSGGPLESITHGVTGFLCEPDPVHFSEAMEKFI-HE 379
Query: 350 GNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNML 385
++ G R KFS +AF+ QL V +L
Sbjct: 380 PSLKATMGLAGRARVKAKFSSEAFTEQLYQYVTKLL 415
|
|
| UNIPROTKB|E2R622 ALG2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 176/397 (44%), Positives = 253/397 (63%)
Query: 2 LGATARLTITAT----AWGATGPRTTAH---DHCFKETKDGTLPVKVIGDWLPRNIF--G 52
+G RL + A A G + TAH HCF +++ L V+ GDWLPR++ G
Sbjct: 26 VGGAERLVLDAALALQARGCSVKLWTAHYDPGHCFADSRG--LQVRCAGDWLPRSLGWGG 83
Query: 53 KFYALCMYLRMIVIALYVAWYSEKP-DLVFCD-LVSICIPILQA--KQFKVLFYCHYPDQ 108
+ A+C Y+RM+ +ALYV + ++ D+V CD +VS CIP+L+ ++ K+LFYCH+PD
Sbjct: 84 RGAAVCAYVRMVFLALYVLFLGDEEFDVVVCDQVVSACIPVLKLARRRKKILFYCHFPDL 143
Query: 109 LLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPS 168
LL+++ SFLK +YR P++ +EE+TT AD I+VNS FT ++ + TF+SL H D+LYPS
Sbjct: 144 LLTRRDSFLKRLYRAPIDWIEEYTTGMADCILVNSRFTAAIFKETFKSLSHIEPDVLYPS 203
Query: 169 VYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMK 228
+ + T PE +++++ P GK+ +FLSINRYERKKNL LA+ +L LR RL+ +
Sbjct: 204 LNVTSFDSTAPEKLDDLV-P-EGKK-FLFLSINRYERKKNLTLALEALVKLRGRLTSQDW 260
Query: 229 THVKLVVAGGYDPHNIENVEYYXXXXXXXXXXXXSDNVLFLTSPSDAAKISLFKFCHCII 288
V L++AGGYD +ENV++Y + V FL S SD KISL C C++
Sbjct: 261 DKVHLIMAGGYDERVLENVDHYQELKKMVQQSDLAQCVTFLRSFSDKQKISLLHGCTCVL 320
Query: 289 YTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDN 348
YTPS+EHFGIVP+EAM+ + PVIAVNSGGP ES+ G TGFLCE + F++AM+K + +
Sbjct: 321 YTPSHEHFGIVPLEAMYMQCPVIAVNSGGPLESITHGVTGFLCEPDPVHFSEAMEKFI-H 379
Query: 349 DGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNML 385
+ ++ G R KFS +AF+ QL V +L
Sbjct: 380 EPSLKATMGLAGRARVKAKFSSEAFTEQLYQYVTKLL 416
|
|
| MGI|MGI:1914731 Alg2 "asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 180/396 (45%), Positives = 249/396 (62%)
Query: 2 LGATARLTITATA----WGATGPRTTAH---DHCFKETKDGTLPVKVIGDWLPRNIF--G 52
+G RL + A +G TAH +HCF ET++ L V+ GDWLPR++ G
Sbjct: 26 IGGAERLVLDAALALQEYGCDVKIWTAHYDPNHCFIETRE--LSVQCAGDWLPRSLGWGG 83
Query: 53 KFYALCMYLRMIVIALYVAWYS-EKPDLVFCDLVSICIPI--LQAKQFKVLFYCHYPDQL 109
+ A+C Y+RM+ +ALYV + S E+ D+V CD VS CIP+ L ++ +VLFYCH+PD L
Sbjct: 84 RGAAICSYVRMVFLALYVLFLSGEEFDVVVCDQVSACIPVFKLARRRKRVLFYCHFPDLL 143
Query: 110 LSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSV 169
L+++ S LK YR P++ +EE+TT AD+I+VNS++T SV + TF++L H+ D+LYPS+
Sbjct: 144 LTQRNSALKKFYRAPIDWIEEYTTGMADRILVNSQYTASVFKETFKTLSHRNPDVLYPSL 203
Query: 170 YTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKT 229
+ PE I++++ P GK+ +FLSINRYERKKNL LA+ SL LR+RL +
Sbjct: 204 NIGSFDLAIPEKIDDLV-P-KGKQ-FLFLSINRYERKKNLPLALRSLVQLRNRLPSQEWD 260
Query: 230 HVKLVVAGGYDPHNIENVEYYXXXXXXXXXXXXSDNVLFLTSPSDAAKISLFKFCHCIIY 289
V L +AGGYD ENVE+Y +V FL S SD KISL C C++Y
Sbjct: 261 KVHLFMAGGYDDRIPENVEHYKELKKMVQESDLERHVTFLRSFSDRQKISLLHGCLCVLY 320
Query: 290 TPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDND 349
TPSNEHFGIVP+EAM+ + PVIAVN+GGP ES+V TGFLCE + F++AM+K +
Sbjct: 321 TPSNEHFGIVPLEAMYMQCPVIAVNNGGPLESIVHKVTGFLCEPDPVHFSEAMEKFIHKP 380
Query: 350 GNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNML 385
++ G R EKFS AF+ QL V ++
Sbjct: 381 -SLKATMGLAGKARVAEKFSADAFADQLYQYVTKLV 415
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q6BVA4 | ALG2_DEBHA | 2, ., 4, ., 1, ., 2, 5, 7 | 0.3702 | 0.9205 | 0.7542 | yes | N/A |
| Q6C3V7 | ALG2_YARLI | 2, ., 4, ., 1, ., 2, 5, 7 | 0.3510 | 0.8974 | 0.7608 | yes | N/A |
| Q9DBE8 | ALG2_MOUSE | 2, ., 4, ., 1, ., 2, 5, 7 | 0.4621 | 0.9692 | 0.9108 | yes | N/A |
| Q9H553 | ALG2_HUMAN | 2, ., 4, ., 1, ., 2, 5, 7 | 0.4621 | 0.9692 | 0.9086 | yes | N/A |
| P43636 | ALG2_YEAST | 2, ., 4, ., 1, ., 2, 5, 7 | 0.3479 | 0.9666 | 0.7495 | yes | N/A |
| Q7KWM5 | ALG2_DICDI | 2, ., 4, ., 1, ., 2, 5, 7 | 0.4133 | 0.9769 | 0.9071 | yes | N/A |
| Q6FJJ9 | ALG2_CANGA | 2, ., 4, ., 1, ., 2, 5, 7 | 0.3638 | 0.9282 | 0.7903 | yes | N/A |
| Q6CWQ0 | ALG2_KLULA | 2, ., 4, ., 1, ., 2, 5, 7 | 0.3847 | 0.9512 | 0.7375 | yes | N/A |
| Q755C1 | ALG2_ASHGO | 2, ., 4, ., 1, ., 2, 5, 7 | 0.3433 | 0.9461 | 0.7178 | yes | N/A |
| Q96WW6 | ALG2_SCHPO | 2, ., 4, ., 1, ., 2, 5, 7 | 0.3806 | 0.8256 | 0.6363 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.691 |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 390 | |||
| cd03805 | 392 | cd03805, GT1_ALG2_like, This family is most closel | 1e-172 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 1e-39 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 4e-34 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 2e-30 | |
| cd03804 | 351 | cd03804, GT1_wbaZ_like, This family is most closel | 2e-29 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 4e-28 | |
| cd03806 | 419 | cd03806, GT1_ALG11_like, This family is most close | 3e-27 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 1e-23 | |
| cd03794 | 394 | cd03794, GT1_wbuB_like, This family is most closel | 2e-23 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 2e-23 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 3e-23 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 2e-21 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 8e-21 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 2e-20 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 2e-19 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 2e-19 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 3e-18 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 8e-18 | |
| PLN02949 | 463 | PLN02949, PLN02949, transferase, transferring glyc | 2e-16 | |
| cd03802 | 335 | cd03802, GT1_AviGT4_like, This family is most clos | 2e-16 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 1e-14 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 1e-14 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 2e-13 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 3e-12 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 1e-11 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 7e-11 | |
| TIGR03449 | 405 | TIGR03449, mycothiol_MshA, D-inositol-3-phosphate | 1e-10 | |
| TIGR02149 | 388 | TIGR02149, glgA_Coryne, glycogen synthase, Coryneb | 3e-10 | |
| PLN00142 | 815 | PLN00142, PLN00142, sucrose synthase | 1e-09 | |
| cd03822 | 366 | cd03822, GT1_ecORF704_like, This family is most cl | 2e-09 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 5e-09 | |
| cd04955 | 363 | cd04955, GT1_like_6, This family is most closely r | 1e-08 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 1e-08 | |
| cd03813 | 475 | cd03813, GT1_like_3, This family is most closely r | 2e-08 | |
| TIGR02470 | 784 | TIGR02470, sucr_synth, sucrose synthase | 3e-08 | |
| cd03792 | 372 | cd03792, GT1_Trehalose_phosphorylase, Trehalose ph | 4e-08 | |
| pfam13692 | 134 | pfam13692, Glyco_trans_1_4, Glycosyl transferases | 9e-08 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 1e-07 | |
| cd04949 | 372 | cd04949, GT1_gtfA_like, This family is most closel | 2e-06 | |
| TIGR02472 | 439 | TIGR02472, sucr_P_syn_N, sucrose-phosphate synthas | 2e-05 | |
| TIGR04047 | 373 | TIGR04047, MSMEG_0565_glyc, glycosyltransferase, M | 4e-05 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 7e-05 | |
| PRK15484 | 380 | PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety | 1e-04 | |
| TIGR04063 | 397 | TIGR04063, stp3, PEP-CTERM/exosortase A-associated | 2e-04 | |
| cd03812 | 358 | cd03812, GT1_CapH_like, This family is most closel | 0.003 |
| >gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 485 bits (1251), Expect = e-172
Identities = 192/363 (52%), Positives = 249/363 (68%), Gaps = 14/363 (3%)
Query: 22 TTAHD--HCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYV-AWYSEKPD 78
T+ HD HCF+ETKDGTLPV+V GDWLPR+IFG+F+ LC YLRM+ +ALY+ EK D
Sbjct: 37 TSHHDPSHCFEETKDGTLPVRVRGDWLPRSIFGRFHILCAYLRMLYLALYLLLLPDEKYD 96
Query: 79 LVFCDLVSICIPILQAKQF---KVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCK 135
+ D VS C+P+L K F K+LFYCH+PDQLL+++GS LK +YR P + LEE+TT
Sbjct: 97 VFIVDQVSACVPLL--KLFSPSKILFYCHFPDQLLAQRGSLLKRLYRKPFDWLEEFTTGM 154
Query: 136 ADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDI 195
ADKIVVNS FT SV + TF SL +++YP V T+ E T+ +P +L P GK
Sbjct: 155 ADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDPDPGLLIPKSGK--K 212
Query: 196 VFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGV 255
FLSINR+ERKKN+ LAI + L+ +L++ +V+LV+AGGYDP ENVEY +EL
Sbjct: 213 TFLSINRFERKKNIALAIEAFAILKDKLAE--FKNVRLVIAGGYDPRVAENVEYLEELQR 270
Query: 256 LVKKLK-LSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVN 314
L ++L L D V+FL S SD+ K L ++YTPSNEHFGIVP+EAM+ +PVIA N
Sbjct: 271 LAEELLLLEDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACN 330
Query: 315 SGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFS 374
SGGP E+VVDG TGFLCE E FA+AM K+ ND ++ + G R EKFS +AF+
Sbjct: 331 SGGPLETVVDGETGFLCEPTPEEFAEAMLKLA-NDPDLADRMGAAGRKRVKEKFSTEAFA 389
Query: 375 IQL 377
+L
Sbjct: 390 ERL 392
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 144 bits (366), Expect = 1e-39
Identities = 82/352 (23%), Positives = 139/352 (39%), Gaps = 32/352 (9%)
Query: 22 TTAHDHCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYSEKPDLVF 81
T E + G + V L L + LR ++ E+ D+V
Sbjct: 38 TPGDGGLPDEEEVGGIVVVRPPPLLRVRRLLLLLLLALRLRRLLRR-------ERFDVVH 90
Query: 82 C-DLVSICIPILQAKQFKV--LFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADK 138
D +++ L A+ + + H + + + LE +AD+
Sbjct: 91 AHDWLALLAAALAARLLGIPLVLTVHGLE---FGRPGNELGLLLKLARALERRALRRADR 147
Query: 139 IVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFL 198
I+ SE T+ ++ K + ++ V TE + P P +++ V L
Sbjct: 148 IIAVSEATREELRELGGVPPEK-ITVIPNGVDTE---RFRPAPRAARRRLGIPEDEPVIL 203
Query: 199 SINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVK 258
+ R +K ++L + +L LR D V+LV+ G +EL L
Sbjct: 204 FVGRLVPRKGVDLLLEALAKLRKEYPD-----VRLVIVGDG--------PLREELEALAA 250
Query: 259 KLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGP 318
+L L D V FL D +L+ + E FG+V +EAM PV+A + GG
Sbjct: 251 ELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGI 310
Query: 319 KESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFS 369
E V DG TG L + EA A+A+ +++D D + ++ + R E+FS
Sbjct: 311 PEVVEDGETGLLVPPGDPEALAEAILRLLD-DPELRRRLGEAARERVAERFS 361
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 130 bits (326), Expect = 4e-34
Identities = 83/343 (24%), Positives = 144/343 (41%), Gaps = 24/343 (6%)
Query: 47 PRNIFGKFYALCMYLRMIVIALYVAWYSEKPDLVFCDLVSICIPILQAKQFKVLFYCHYP 106
+ + L + L + + Y ++ L L+++ + L V + P
Sbjct: 62 LLIVRLRPALLRLLLLLKRLLPYDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIP 121
Query: 107 DQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILY 166
LL + L + R L +L++ AD+++ S K +++A + ++
Sbjct: 122 RILLLPRLLLLLGLLRLLLKRLKKALRLLADRVIAVSPALKELLEALGV---PNKIVVIP 178
Query: 167 PSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDE 226
+ TE + LP V L + R + +K L+L I + L+ R D
Sbjct: 179 NGIDTEKFAP-------ARIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD- 230
Query: 227 MKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHC 286
+KLV+ G E +EL L KKL L DNV FL D L
Sbjct: 231 ----IKLVIVGDGP-------ERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASADV 279
Query: 287 IIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCE-SNEEAFAKAMKKI 345
+ +E FG+V +EAM PVIA + GG E V DG TG L + E A A++++
Sbjct: 280 FVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQL 339
Query: 346 VDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKK 388
+++ + ++ + R E+FS++ + QL + +L +K
Sbjct: 340 LEDP-ELREELGEAARERVEEEFSWERIAEQLLELYEELLAEK 381
|
Length = 381 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 113 bits (286), Expect = 2e-30
Identities = 50/158 (31%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 193 EDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKE 252
+ + L + R +K L+L + + L+ + + +KLV+ G E K+
Sbjct: 1 DKPIILFVGRLVPEKGLDLLLEAFALLKEQHPN-----LKLVIVGD--------GEEEKK 47
Query: 253 LGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIA 312
L L KL L DNV+F+ D I L++ + E FG+V +EAM PVIA
Sbjct: 48 LKKLALKLGLEDNVIFVGFVPDEDLIELYRIADLFVLPSRYEGFGLVLLEAMAAGVPVIA 107
Query: 313 VNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDND 349
+ GGP E V DG TG L + + EA A+A++K++ ++
Sbjct: 108 TDVGGPAEIVKDGETGLLVDPGDAEALAEAIEKLLKDE 145
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 2e-29
Identities = 81/294 (27%), Positives = 114/294 (38%), Gaps = 75/294 (25%)
Query: 100 LFYCHYP--------DQLLSKQGSFLKSIYRFPLNKLEEWTTCKA---DKIVVNSEFTKS 148
+ YCH P L + G + R L+ L W A D + NS F
Sbjct: 107 ICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYFIANSRFVAR 166
Query: 149 VVQATFRSLDHKCL----DILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINR-- 202
++ K ++YP V T+ P KED +LS+ R
Sbjct: 167 RIK--------KYYGRDATVIYPPVDTDRFT------------PAEEKEDY-YLSVGRLV 205
Query: 203 -YERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLK 261
Y K ++LAI + N L +LVV G G + +L+
Sbjct: 206 PY---KRIDLAIEAFNKLG----------KRLVVIGD---------------GPELDRLR 237
Query: 262 --LSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPK 319
NV FL SD L+ ++ E FGIVP+EAM PVIA GG
Sbjct: 238 AKAGPNVTFLGRVSDEELRDLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGAL 296
Query: 320 ESVVDGRTGFL-CESNEEAFAKAMKKIVDN---DGNIIQQFS-QFGFNRFNEKF 368
E+V+DG TG L E E+ A A+++ N D I+ + +F +RF EK
Sbjct: 297 ETVIDGVTGILFEEQTVESLAAAVERFEKNEDFDPQAIRAHAERFSESRFREKI 350
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 4e-28
Identities = 71/368 (19%), Positives = 134/368 (36%), Gaps = 46/368 (12%)
Query: 24 AHDHCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYSEKPDLVFCD 83
+ G L L + L L + + +PDL+
Sbjct: 41 PWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGPLLYLLAARALLKLLKLKRFRPDLIHAH 100
Query: 84 LVS----ICIPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKI 139
+ + ++ H D L + L+++ R L + AD +
Sbjct: 101 FAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKRLLRALLRRALRR--------ADAV 152
Query: 140 VVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLS 199
+ SE ++A +D + + ++ V E+ +P ++ V L
Sbjct: 153 IAVSEALADELKALG--IDPEKVTVIPNGV---DTERFSPADRAEARKLGLPEDKKVILF 207
Query: 200 INRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKK 259
+ R +K ++ I +L L + D V LV+ G + + L L +
Sbjct: 208 VGRLVPRKGIDYLIEALARLLKKRPD-----VHLVIVG--------DGPLREALEALAAE 254
Query: 260 LKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPS-NEHFGIVPIEAMFCKRPVIAVNSGGP 318
L L D V FL + + + + PS E FG+V +EAM C PV+A + GG
Sbjct: 255 LGLEDRVTFLGAVPHEEVPAYYAAADVFVL-PSLREGFGLVLLEAMACGLPVVATDVGGI 313
Query: 319 KESVVDGRTGFLCES-NEEAFAKAMKKIVDN-----DGNIIQQFSQFGFNRFNEKFSFQA 372
E + DG G L + EA A+A+ +++ + ++ + E+FS++
Sbjct: 314 PEIITDGENGLLVPPGDPEALAEAILRLLADPWLRLGRAARRRVA--------ERFSWEN 365
Query: 373 FSIQLNTI 380
+ +L +
Sbjct: 366 VAERLLEL 373
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|99978 cd03806, GT1_ALG11_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 3e-27
Identities = 84/345 (24%), Positives = 148/345 (42%), Gaps = 59/345 (17%)
Query: 64 IVIALYVAWYSEKPDLVFCD---------LVSICIPILQAKQFKVLFYCHYP-------D 107
+++ L A PD +F D LV + V Y HYP
Sbjct: 96 MILGLE-ALLKLVPD-IFIDTMGYPFTYPLVRLLGGC------PVGAYVHYPTISTDMLQ 147
Query: 108 QLLSKQGSF--------------LKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQAT 153
++ S++ S+ K +Y L AD ++VNS +T++ +++
Sbjct: 148 KVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSL 207
Query: 154 FRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAI 213
++ + I+YP E L K L + LSI ++ +KN L +
Sbjct: 208 WKR--NTKPSIVYPPCDVEELLK---------LPLDEKTRENQILSIAQFRPEKNHPLQL 256
Query: 214 YSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPS 273
+ L RL +E+K +KLV+ G N ++ + ++L +L K+L L D V F+ +
Sbjct: 257 RAFAKLLKRLPEEIKEKIKLVLIGSC--RNEDDEKRVEDLKLLAKELGLEDKVEFVVNAP 314
Query: 274 DAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVV----DGRTGF 329
+ ++T NEHFGI +E M +A SGGP +V G TGF
Sbjct: 315 FEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGF 374
Query: 330 LCESNEEAFAKAMKKIV---DNDGNIIQQFSQFGFNRFNEKFSFQ 371
L + EE +A+A++KI+ + + I++ ++ RF+++ +
Sbjct: 375 LASTAEE-YAEAIEKILSLSEEERLRIRRAARSSVKRFSDEEFER 418
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. Length = 419 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 1e-23
Identities = 49/186 (26%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 190 PGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEY 249
P K I+ + R + +K ++ I + L LV+ GG P +
Sbjct: 218 PDKPRILAVG--RLDPRKGIDTLIRAYAELPELRER-----ANLVIVGG--PRDDILAMD 268
Query: 250 YKELGVLVKKLKLSDNVLFL--TSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCK 307
+EL L ++L + D V F S D L++ + E FG+ +EAM C
Sbjct: 269 EEELRELARELGVIDRVDFPGRVSREDLPA--LYRAADVFVNPALYEPFGLTALEAMACG 326
Query: 308 RPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNE 366
PV+A GGP++ VVDG TG L + + EA A A+++++ + + ++ S+ G R
Sbjct: 327 LPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDP-ALRRRLSRAGLRRARA 385
Query: 367 KFSFQA 372
+++++
Sbjct: 386 RYTWER 391
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 2e-23
Identities = 72/371 (19%), Positives = 129/371 (34%), Gaps = 42/371 (11%)
Query: 19 GPRTTAHDHCFKETKDGTLPVKVIGDWLP--RNIFGKFYALCMYLRMIVIALYVAWYSEK 76
P + +E DG V+V LP + L + L + +
Sbjct: 43 YPSGKIYKGYKREEVDG---VRVHRVPLPPYKKNGLLKRLLNYLSFALSALLALLKRRRR 99
Query: 77 PDLVFC--DLVSICIPILQAKQF---KVLFYCH--YPDQLLSKQGSFLKSIYRFPLNKLE 129
PD++ + I + L + + +P+ ++ S+ L KLE
Sbjct: 100 PDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLE 159
Query: 130 EWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPL 189
+AD IVV S + + R + + + ++ V E + + L
Sbjct: 160 RLIYRRADAIVVISPGMREYLVR--RGVPPEKISVIPNGVDLELFKPPPADESLRKELGL 217
Query: 190 PGKEDIVFL-SINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAG-GYDPHNIENV 247
K +++ +I R + L+ + + L+ R ++ ++ G G
Sbjct: 218 DDKFVVLYAGNIGRAQ---GLDTLLEAAALLKDR------PDIRFLIVGDG--------- 259
Query: 248 EYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYT--PSNEHFGIVP---IE 302
+EL L K L L DNV FL L + P G+ P E
Sbjct: 260 PEKEELKELAKALGL-DNVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFE 318
Query: 303 AMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGF 361
M +PV+A G E V + G + + EA A A+ +++D+ + + G
Sbjct: 319 YMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDP-EERAEMGENGR 377
Query: 362 NRFNEKFSFQA 372
EKFS +
Sbjct: 378 RYVEEKFSREK 388
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 96.9 bits (241), Expect = 2e-23
Identities = 57/225 (25%), Positives = 86/225 (38%), Gaps = 20/225 (8%)
Query: 108 QLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYP 167
+ L+++G ++ + L L K D + + + + L + L I
Sbjct: 24 KALARRGHEVEVVALLLLLLLRILRGFKPDVVHAHGYYPAPL----ALLLAARLLGIPLV 79
Query: 168 SVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEM 227
++L G D VF+ R +K L+ I + L+ R D
Sbjct: 80 LTVHGVNRSLLEGVPLSLLALSIGLADKVFVG--RLAPEKGLDDLIEAFALLKERGPD-- 135
Query: 228 KTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTS-PSDAAKISLFKFCHC 286
+KLV+AG + L L+ L L D V+FL + L
Sbjct: 136 ---LKLVIAGDGPE--------REYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADV 184
Query: 287 IIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLC 331
+ E FG+V +EAM C PVIA + GGP E V DG TG L
Sbjct: 185 FVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 99.3 bits (248), Expect = 3e-23
Identities = 74/333 (22%), Positives = 123/333 (36%), Gaps = 46/333 (13%)
Query: 45 WLPRNIFGKFYALCMYLRMIVIALYVAWYSEKPDLVFC---DLVSICIPILQAKQFKVLF 101
L A+ R++ EKPD+V ++ + K++
Sbjct: 58 VLKLKSLRDLLAILRLRRLL--------RKEKPDVVISHLTTTPNVLALLAARLGTKLIV 109
Query: 102 YCH-YPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHK 160
+ H L ++ L I +ADKIV SE K + K
Sbjct: 110 WEHNSLSLELKRKLRLLLLIR---------KLYRRADKIVAVSEGVKEDLLKLLGIPPDK 160
Query: 161 CLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLR 220
++++Y + E + EP+E + V L++ R +K + I + LR
Sbjct: 161 -IEVIYNPIDIEEIRALAEEPLE----LGIPPDGPVILAVGRLSPQKGFDTLIRAFALLR 215
Query: 221 SRLSDEMKTHVKLVVAG-GYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKIS 279
D +LV+ G G +E L K+L L+D V FL S+
Sbjct: 216 KEGPD-----ARLVILGDGPLREELEA---------LAKELGLADRVHFLGFQSNPYPY- 260
Query: 280 LFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAF 338
K + + E F V +EAM PV+A + GP+E + DG G L +E A
Sbjct: 261 -LKAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAAL 319
Query: 339 AKAMKKIVDN--DGNIIQQFSQFGFNRFNEKFS 369
A A ++D D + ++ + R ++S
Sbjct: 320 AAAALALLDLLLDPELRERLAAAARERVAREYS 352
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 93.8 bits (234), Expect = 2e-21
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 25/201 (12%)
Query: 188 PLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENV 247
++D VFL + R + K ++ + + L+++ +V+L++ G D N
Sbjct: 182 EPIPEDDPVFLFVARLLKDKGIDELLEAARILKAK-----GPNVRLLLVGDGDEEN---- 232
Query: 248 EYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSN-EHFGIVPIEAMFC 306
L ++KL L V FL D L + PS E V +EAM
Sbjct: 233 -PAAIL--EIEKLGLEGRVEFLGFRDDVP--ELLAAADVFVL-PSYREGLPRVLLEAMAM 286
Query: 307 KRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFN 365
RPVIA + G +E+V+DG GFL + EA A A+++++++ + + Q R
Sbjct: 287 GRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDP-ELRARMGQAARKRAE 345
Query: 366 EKFSFQAFSIQLNTIVNNMLD 386
E+F + +V +L+
Sbjct: 346 EEFDEEI-------VVKKLLE 359
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 92.4 bits (230), Expect = 8e-21
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 23/237 (9%)
Query: 135 KADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKED 194
+AD I+ SE TK + K + ++ V P VL L
Sbjct: 140 RADAIITVSEATKRDLLRYLGVPPDK-IVVIPLGV---DPRFRPPPAEAEVLRALYLLPR 195
Query: 195 IVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELG 254
FL + E +KNLE + + L ++ D KLV+ G N E + +ELG
Sbjct: 196 PYFLYVGTIEPRKNLERLLEAFARLPAKGPD-----PKLVIVGKRGWLNEELLARLRELG 250
Query: 255 VLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPS-NEHFGIVPIEAMFCKRPVIAV 313
L D V FL SD +L++ ++ PS E FG+ +EAM C PVIA
Sbjct: 251 -------LGDRVRFLGYVSDEELAALYRGARAFVF-PSLYEGFGLPVLEAMACGTPVIAS 302
Query: 314 NSGGPKESVVDGRTGFLCE-SNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFS 369
N E V G + + EA A A+++++++ + ++ + G R ++FS
Sbjct: 303 NISSLPE-VA-GDAALYFDPLDPEALAAAIERLLEDPA-LREELRERGLARA-KRFS 355
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 91.1 bits (227), Expect = 2e-20
Identities = 69/272 (25%), Positives = 102/272 (37%), Gaps = 42/272 (15%)
Query: 112 KQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSE--FTKSVVQATFRSLDHKCLDILYPSV 169
KQ LK +YR PL + +AD IV S S V FR K V
Sbjct: 119 KQKLLLK-LYR-PL---QRRFLRRADAIVATSPNYAETSPVLRRFR---DKV------RV 164
Query: 170 YTEGLEKTT-PEPIENVLNPLPGKED-IVFLSINRYERKKNLELAIYSLNSLRSRLSDEM 227
GL+ P P FL + R K L++ + + +L
Sbjct: 165 IPLGLDPARYPRPDALEEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAALPD------ 218
Query: 228 KTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCI 287
LV+ G EL L L L D V FL D K +L C
Sbjct: 219 ---APLVIVG--------EGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVF 267
Query: 288 IYTPSNEH---FGIVPIEAMFCKRPVIAVNSGGPKESVV-DGRTGFLCE-SNEEAFAKAM 342
++ PS E FGIV +EAM +PVI+ G V G TG + + A A+A+
Sbjct: 268 VF-PSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAI 326
Query: 343 KKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFS 374
++++++ + ++ + R E+F+
Sbjct: 327 RRLLEDP-ELRERLGEAARERAEEEFTADRMV 357
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 88.1 bits (219), Expect = 2e-19
Identities = 56/223 (25%), Positives = 91/223 (40%), Gaps = 31/223 (13%)
Query: 135 KADKIVVNSEFTKSVVQATFRSLDHKC----LDILY----PSVYTEGLEKTTPEPIENVL 186
+ D+++ S F ++ ++ + ++ + G PE I +
Sbjct: 124 RGDRVIAVSNFIADHIRE-----NYGVDPDRIRVIPRGVDLDRFDPG--AVPPERILALA 176
Query: 187 NPLPGKEDIVFLSI-NRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIE 245
P + + + R R K E+ I +L L+ D V L++ G
Sbjct: 177 REWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPD-----VHLLIVGDAQGRR-- 229
Query: 246 NVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEH--FGIVPIEA 303
YY EL L+K+L L D V F+ SD + ++ + S E FG +EA
Sbjct: 230 --FYYAELLELIKRLGLQDRVTFVGHCSDMPAA--YALADIVV-SASTEPEAFGRTAVEA 284
Query: 304 MFCKRPVIAVNSGGPKESVVDGRTGFLCESN-EEAFAKAMKKI 345
RPVIA + GG +E+V G TG L EA A+A+ +I
Sbjct: 285 QAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQI 327
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 88.1 bits (219), Expect = 2e-19
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 24/182 (13%)
Query: 174 LEKTTPEPIENVLNPLPGKED-IVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVK 232
L++ P ++ L ED V L + R ++KN++ I + L D VK
Sbjct: 181 LDRFEPVDGDDERRKLGIPEDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPD-----VK 235
Query: 233 LVVAG-GYDPHNIENVEYYKELGVLVKKLKLSDNVLFL--TSPSDAAKISLFKFCHCIIY 289
LV+ G G + +E L ++L L+D V+F + + ++
Sbjct: 236 LVIVGDGPEREELEE---------LARELGLADRVIFTGFVPREELPDY----YKAADLF 282
Query: 290 -TPSN-EHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVD 347
S E G+V +EAM PV+AV++ G + V DG GFL +EA A+A+ +++
Sbjct: 283 VFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDEALAEALLRLLQ 342
Query: 348 ND 349
+
Sbjct: 343 DP 344
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 84.6 bits (210), Expect = 3e-18
Identities = 70/313 (22%), Positives = 119/313 (38%), Gaps = 72/313 (23%)
Query: 60 YLRMIVIALYVAWYSEKPDLV--FCDLVSICIPILQAKQFKVLFYCH-YPDQLLSKQGSF 116
LR ++ + KPD+V F + + L K K++ H PD +
Sbjct: 74 RLRKLLK-------NNKPDVVISFLTSLLTFLASLGLKIVKLIVSEHNSPDAYKKRLRRL 126
Query: 117 L--KSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGL 174
L + +YR AD +VV +E + A + +K + ++ +
Sbjct: 127 LLRRLLYRR------------ADAVVVLTEEDR----ALYYKKFNKNVVVIPNPL----- 165
Query: 175 EKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLV 234
P P E + L K L++ R +K +L I + + + D KL
Sbjct: 166 ----PFPPEEPSSDLKSK---RILAVGRLVPQKGFDLLIEAWAKIAKKHPD-----WKLR 213
Query: 235 VAG-GYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSD------AAKISLFKFCHCI 287
+ G G + L L+K+L L D V+ L + A I +
Sbjct: 214 IVGDG---------PEREALEALIKELGLEDRVILLGFTKNIEEYYAKASIFVL------ 258
Query: 288 IYTPSNEHFGIVPIEAMFCKRPVIAVN-SGGPKESVVDGRTGFLCE-SNEEAFAKAMKKI 345
T E F +V +EAM PVI+ + GP E + DG G L + EA A+A+ ++
Sbjct: 259 --TSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRL 316
Query: 346 VDNDGNIIQQFSQ 358
+ D + ++
Sbjct: 317 M-EDEELRKRMGA 328
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 83.9 bits (208), Expect = 8e-18
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 22/201 (10%)
Query: 186 LNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIE 245
LP K I+FL R KK L+L I + ++L++ LV+AG D
Sbjct: 197 FPILPDKRIILFLG--RLHPKKGLDLLIEAF----AKLAERFP-DWHLVIAG-PDEG--- 245
Query: 246 NVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMF 305
Y EL + L L D V F K + + +E+FGIV EA+
Sbjct: 246 --GYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALA 303
Query: 306 CKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFN 365
C PV+ + +E +++ G++ + + +A A A+++ ++ ++ + G
Sbjct: 304 CGTPVVTTDKVPWQE-LIEYGCGWVVDDDVDALAAALRRALELP-QRLKAMGENGRALVE 361
Query: 366 EKFSFQAFSIQLNTIVNNMLD 386
E+FS+ A I +L+
Sbjct: 362 ERFSWTA-------IAQQLLE 375
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|215511 PLN02949, PLN02949, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 80.2 bits (198), Expect = 2e-16
Identities = 77/314 (24%), Positives = 131/314 (41%), Gaps = 45/314 (14%)
Query: 98 KVLFYCHYP-------------------DQLLSKQG--SFLKSIYRFPLNKLEEWTTCKA 136
KV+ Y HYP D +++ S K +Y + A
Sbjct: 162 KVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCA 221
Query: 137 DKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKED-I 195
+VNS +TKS ++A +R + + +YP T GL+ PL ED
Sbjct: 222 HLAMVNSSWTKSHIEALWRIPER--IKRVYPPCDTSGLQAL----------PLERSEDPP 269
Query: 196 VFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGV 255
+S+ ++ +K L + + +L ++ KL G N E+ E ++L
Sbjct: 270 YIISVAQFRPEKAHALQLEAFALALEKLDADVP-RPKLQFVGSC--RNKEDEERLQKLKD 326
Query: 256 LVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS 315
K+L L +V F + S + L +++ +EHFGI +E M IA NS
Sbjct: 327 RAKELGLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNS 386
Query: 316 GGPKESVV----DGRTGFLCESNEEAFAKAMKKIV---DNDGNIIQQFSQFGFNRFNEKF 368
GPK +V +TGFL + EE +A A+ +++ + + I ++ NRF+E+
Sbjct: 387 AGPKMDIVLDEDGQQTGFLATTVEE-YADAILEVLRMRETERLEIAAAARKRANRFSEQR 445
Query: 369 SFQAFSIQLNTIVN 382
+ F + I+N
Sbjct: 446 FNEDFKDAIRPILN 459
|
Length = 463 |
| >gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 78.8 bits (195), Expect = 2e-16
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 21/157 (13%)
Query: 190 PGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEY 249
P + ++FL R +K LAI + +R + + L +AG + +
Sbjct: 169 PKGDYLLFLG--RISPEKGPHLAIRA-----ARRAG-----IPLKLAGPV--SDPDYFYR 214
Query: 250 YKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPS-NEHFGIVPIEAMFCKR 308
+L ++ +L A K L +++ E FG+V IEAM C
Sbjct: 215 EIA-----PELLDGPDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGT 269
Query: 309 PVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKI 345
PVIA G E V DG TGFL + + E A A+ +
Sbjct: 270 PVIAFRRGAVPEVVEDGVTGFLVD-SVEELAAAVARA 305
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 74.6 bits (184), Expect = 1e-14
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 256 LVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS 315
L ++L L D+VLFL ++ + E FG+ +EAM C PV+A N+
Sbjct: 245 LARELGLQDDVLFLGKQDHVEEL--LSIADLFLLPSEKESFGLAALEAMACGVPVVASNA 302
Query: 316 GGPKESVVDGRTGFLCE-SNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFS 369
GG E V G TGFL + + EA A+ +++ D + Q+FS+ NR E+F
Sbjct: 303 GGIPEVVKHGETGFLVDVGDVEAMAEYALSLLE-DDELWQEFSRAARNRAAERFD 356
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 74.6 bits (184), Expect = 1e-14
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 256 LVKKLKLSDNVLFLTSPSDAAKI----SLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVI 311
LV++L L+D VLFL D A++ LF + E FG+ +EAM C PVI
Sbjct: 247 LVRELGLTDRVLFLGKQDDVAELLSISDLF------LLPSEKESFGLAALEAMACGVPVI 300
Query: 312 AVNSGGPKESVVDGRTGFLCE-SNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFS 369
A N+GG E V G TGFLC+ + E A+ ++ D ++Q+FS R E+F
Sbjct: 301 ASNAGGIPEVVEHGVTGFLCDVGDVETMAEYAISLL-EDEELLQRFSAAARERAKERFD 358
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 70.4 bits (173), Expect = 2e-13
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 32/198 (16%)
Query: 194 DIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAG-GYDPHNIENVEYYKE 252
V L++ R K+ + + L +KL++AG G +E
Sbjct: 188 TFVILAVGRLVEAKDYPNLLKAFAKL-----LSDYLDIKLLIAGDGPLRATLER------ 236
Query: 253 LGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIA 312
L+K L LS+ V L D A + + + + E FG+V EAM C+ PV+A
Sbjct: 237 ---LIKALGLSNRVKLLGLRDDIAA--YYNAADLFVLSSAWEGFGLVVAEAMACELPVVA 291
Query: 313 VNSGGPKESVVDGRTGFLCE-SNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFN--EKFS 369
++GG +E V D +G + S+ EA A + +I+ G ++ G R +KFS
Sbjct: 292 TDAGGVREVVGD--SGLIVPISDPEALANKIDEILKMSG---EERDIIGARRERIVKKFS 346
Query: 370 FQAFSIQLNTIVNNMLDK 387
+N+IV L
Sbjct: 347 -------INSIVQQWLTL 357
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 66.9 bits (164), Expect = 3e-12
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 283 FCHCIIYTPS-NEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCE-SNEEAFAK 340
F PS E FG+V +EAM PV+A ++GGP + V DG G L E + EAFA
Sbjct: 270 FVF-----PSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAA 324
Query: 341 AMKKIVDND 349
A+ ++ +
Sbjct: 325 ALAALLADP 333
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 65.0 bits (159), Expect = 1e-11
Identities = 46/169 (27%), Positives = 69/169 (40%), Gaps = 22/169 (13%)
Query: 190 PGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAG-GYDPHNIENVE 248
P + L + R+ KK L + + L R+ + V+LV+ G G P
Sbjct: 184 PARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPE-----VRLVIIGDG--P------- 229
Query: 249 YYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFK----FCHCIIYTPSN--EHFGIVPIE 302
L L + L L V FL + A L + F + PS E +V +E
Sbjct: 230 LLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLE 289
Query: 303 AMFCKRPVIAVNSGGPKESVVDGRTGFLC-ESNEEAFAKAMKKIVDNDG 350
A PV+A GG E+V DG TG L E + A A A+ +++ +
Sbjct: 290 AQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLADPD 338
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 7e-11
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 20/183 (10%)
Query: 192 KEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAG-GYDPHNIENVEYY 250
++ + + R +K+ + + L + + +L++ G G D N+E +
Sbjct: 191 EDTFLIGIVARLHPQKDHATLLRAAALLL-----KKFPNARLLLVGDGPDRANLELLAL- 244
Query: 251 KELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPV 310
K+L L D V+ L SD + + + +E F V +EAM C PV
Sbjct: 245 -------KELGLEDKVILLGERSDVPAL--LNALDVFVLSSLSEGFPNVLLEAMACGLPV 295
Query: 311 IAVNSGGPKESVVDGRTGFLCE-SNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFS 369
+A + G E V D TGFL + EA A+A++ ++ D + Q + R E FS
Sbjct: 296 VATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALL-ADPALRQALGEAARERIEENFS 352
Query: 370 FQA 372
+A
Sbjct: 353 IEA 355
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 1e-10
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 231 VKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYT 290
++++V GG + + EL +L ++D V FL + +++ ++
Sbjct: 253 LRVIVVGGPSGSGLATPDALIELAA---ELGIADRVRFLPPRPPEELVHVYRAAD-VVAV 308
Query: 291 PS-NEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNE-EAFAKAMKKIVDN 348
PS NE FG+V +EA C PV+A GG +V DG TG L + ++ +A A+ +++D+
Sbjct: 309 PSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDD 368
Query: 349 DG 350
Sbjct: 369 PR 370
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405 |
| >gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 3e-10
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 12/92 (13%)
Query: 288 IYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESN-------EEAFAK 340
IY P GIV +EAM C PV+A +GG E VVDG TGFL + + AK
Sbjct: 289 IYEP----LGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAK 344
Query: 341 AMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQA 372
A+ ++ D + ++ G R E+FS+ +
Sbjct: 345 AINILLA-DPELAKKMGIAGRKRAEEEFSWGS 375
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388 |
| >gnl|CDD|215073 PLN00142, PLN00142, sucrose synthase | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 1e-09
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 37/211 (17%)
Query: 192 KEDIVFLSINRYERKKNLE--LAIYSLNS-LRSRLSDEMKTHVKLVVAGGY-DP---HNI 244
K+ I+F S+ R +R KNL + Y N LR E+ V LVV GG+ DP +
Sbjct: 572 KKPIIF-SMARLDRVKNLTGLVEWYGKNKRLR-----EL---VNLVVVGGFIDPSKSKDR 622
Query: 245 ENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAK-------ISLFK--FCHCIIYTPSNEH 295
E + K++ L++K L ++ + ++ + I+ K F +Y E
Sbjct: 623 EEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALY----EA 678
Query: 296 FGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVD------ND 349
FG+ +EAM C P A GGP E +VDG +GF + +A KI D D
Sbjct: 679 FGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHG--DEAANKIADFFEKCKED 736
Query: 350 GNIIQQFSQFGFNRFNEKFSFQAFSIQLNTI 380
+ + S G R E ++++ ++ +L T+
Sbjct: 737 PSYWNKISDAGLQRIYECYTWKIYAERLLTL 767
|
Length = 815 |
| >gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 2e-09
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 26/160 (16%)
Query: 200 INRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKK 259
+ Y K LEL + +L L ++ D V+L+VAG P + Y E L ++
Sbjct: 194 LRPY---KGLELLLEALPLLVAKHPD-----VRLLVAGETHP---DLERYRGEAYALAER 242
Query: 260 LKLSDNVLFLTSPSDAAKI-SLFKFCHCII-------YTPSNEHFGIVPIEAMFCKRPVI 311
L L+D V+F+ ++ LF ++ T S G++ A+ +PVI
Sbjct: 243 LGLADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQS----GVLAY-AIGFGKPVI 297
Query: 312 AVNSGGPKESVVDGRTGFLC-ESNEEAFAKAMKKIVDNDG 350
+ G E V+DG TG L + A A+A+++++ +
Sbjct: 298 STPVGHA-EEVLDGGTGLLVPPGDPAALAEAIRRLLADPE 336
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 5e-09
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 291 PS--NEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCE-SNEEAFAKAMKKIVD 347
PS E+F +V EA+ PVIA + GG E V DG G L + E A A+++++D
Sbjct: 269 PSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLID 328
Query: 348 NDG 350
+
Sbjct: 329 DPD 331
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|100001 cd04955, GT1_like_6, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 1e-08
Identities = 52/286 (18%), Positives = 105/286 (36%), Gaps = 41/286 (14%)
Query: 89 IPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCK-ADKIVVNSEFTK 147
+P+L+ K KV+ + +K G K +F E K AD+++ +S K
Sbjct: 101 LPLLRLKGKKVVVNMDGLEWKRAKWGRPAKRYLKF-----GEKLAVKFADRLIADSPGIK 155
Query: 148 SVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKK 207
++ + + G + + +L + +L + R +
Sbjct: 156 EYLKEKYGR---------DSTYIPYGADHVVSSEEDEILKKYGLEPGRYYLLVGRIVPEN 206
Query: 208 NLELAI--YSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDN 265
N++ I +S + KLV+ G D N Y K L +K
Sbjct: 207 NIDDLIEAFSK----------SNSGKKLVIVGNAD----HNTPYGKLL---KEKAAADPR 249
Query: 266 VLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVP--IEAMFCKRPVIAVNSGGPKESVV 323
++F+ D + L ++ + Y + G P +EAM PV+A ++ +E +
Sbjct: 250 IIFVGPIYDQELLELLRY-AALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLG 308
Query: 324 DGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFS 369
D F + A +++ ++ D + ++ R EK++
Sbjct: 309 DKAIYF---KVGDDLASLLEE-LEADPEEVSAMAKAARERIREKYT 350
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in certain bacteria and Archaea. Length = 363 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 56.0 bits (136), Expect = 1e-08
Identities = 57/226 (25%), Positives = 92/226 (40%), Gaps = 32/226 (14%)
Query: 135 KADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKED 194
+AD +V SE+ + + D + +++ V LE+ P P P P E
Sbjct: 130 RADFVVAISEYNRQQLIR-LLGCDPDKIHVVHCGV---DLERFPPRP------PPPPGEP 179
Query: 195 IVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELG 254
+ LS+ R KK L+ + +L L+ R D +L + G EL
Sbjct: 180 LRILSVGRLVEKKGLDYLLEALALLKDRGID-----FRLDIVGDGPLR--------DELE 226
Query: 255 VLVKKLKLSDNVLFLTSPSDAAKISLFKFCH-----CIIYTPSNEHFGI--VPIEAMFCK 307
L+ +L L D V L + S L + + + G+ V +EAM
Sbjct: 227 ALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVT-AADGDREGLPVVLMEAMAMG 285
Query: 308 RPVIAVNSGGPKESVVDGRTGFLCESNE-EAFAKAMKKIVDNDGNI 352
PVI+ + G E V DG TG L + EA A A+++++D+
Sbjct: 286 LPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDPELR 331
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 2e-08
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 20/189 (10%)
Query: 190 PGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEY 249
P KE V I R K+++ I + + + ++ + V G D E+ EY
Sbjct: 289 PEKEPPVVGLIGRVVPIKDIKTFIRAA----AIVRKKIP-DAEGWVIGPTD----EDPEY 339
Query: 250 YKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRP 309
+E LV+ L L DNV F T + + ++ T +E +V +EAM P
Sbjct: 340 AEECRELVESLGLEDNVKF-TGFQNVKEY--LPKLDVLVLTSISEGQPLVILEAMAAGIP 396
Query: 310 VIAVNSGGPKESVVD------GRTGFLCE-SNEEAFAKAMKKIVDNDGNIIQQFSQFGFN 362
V+A + G +E + G G + ++ EA A+A+ +++ + + + + G
Sbjct: 397 VVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLKDPE-LRRAMGEAGRK 455
Query: 363 RFNEKFSFQ 371
R ++ +
Sbjct: 456 RVERYYTLE 464
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475 |
| >gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 3e-08
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 195 IVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGY----DPHNIENVEYY 250
I+F S+ R +R KNL L R S +++ V LVV G + + E
Sbjct: 552 IIF-SMARLDRVKNLT----GLVECYGR-SPKLRELVNLVVVAGKLDAKESKDREEQAEI 605
Query: 251 KELGVLVKKLKLSDNVLFLTSPSDAAKI-SLFK--------FCHCIIYTPSNEHFGIVPI 301
+++ L+ + +L + ++ + + + L++ F +Y E FG+ +
Sbjct: 606 EKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALY----EAFGLTVL 661
Query: 302 EAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIV------DNDGNIIQQ 355
EAM C P A GGP E + DG +GF + +A +KIV D D + Q+
Sbjct: 662 EAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPY--HGEEAAEKIVDFFEKCDEDPSYWQK 719
Query: 356 FSQFGFNRFNEKFSFQAFSIQLNTI 380
SQ G R EK++++ +S +L T+
Sbjct: 720 ISQGGLQRIYEKYTWKIYSERLLTL 744
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 784 |
| >gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Score = 54.5 bits (132), Expect = 4e-08
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 196 VFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGY---DPHNIENVEYYKE 252
++R++ K+ I + ++ R+ D +LV+ G DP E Y+E
Sbjct: 192 YITQVSRFDPWKDPFGVIDAYRKVKERVPD-----PQLVLVGSGATDDP---EGWIVYEE 243
Query: 253 LGVLVKKLKLSDNVLFLTSPSDAAK-ISLFKFCHCIIYTPS-NEHFGIVPIEAMFCKRPV 310
+ ++ + ++ LT P + ++ + ++ S E FG+ EA++ +PV
Sbjct: 244 V---LEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPV 300
Query: 311 IAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDND 349
IA GG + DG TGFL ++ EEA + + + D +
Sbjct: 301 IAGPVGGIPLQIEDGETGFLVDTVEEAAVRILYLLRDPE 339
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372 |
| >gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 9e-08
Identities = 32/149 (21%), Positives = 53/149 (35%), Gaps = 25/149 (16%)
Query: 201 NRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKL 260
+ L L +L LR L D V+L + G P +
Sbjct: 10 HAPNWDGLLWLLEEALPLLRKALPD-----VELHIIGSG-PEELA--------------- 48
Query: 261 KLSDNVLFLTSPSDAAKISLFKFCH-CIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPK 319
+L+ NV FL D A +L + + +EA+ PV+A + G
Sbjct: 49 RLAPNVHFLGFVEDLA--ALLASADVALAPLRFGAGSPLKLLEALAAGLPVVATDIGAEG 106
Query: 320 ESVVDGRTGFLCESNEEAFAKAMKKIVDN 348
D G L + E FA+A+ +++ +
Sbjct: 107 L-PEDLGWGVLVADDPEEFAEAIVRLLAD 134
|
Length = 134 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 52.6 bits (127), Expect = 1e-07
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 294 EHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDND 349
E+F IEA+ C PV+A + GG + V G TG+L + + E A+ ++ ++ +
Sbjct: 275 ENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP 331
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|99998 cd04949, GT1_gtfA_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 2e-06
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 197 FLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVL 256
+++ R +K L+ I + + ++ D L + G Y + E L
Sbjct: 207 IITVARLAPEKQLDQLIKAFAKVVKQVPD-----ATLDIYG-YGDEEEKLKE-------L 253
Query: 257 VKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIA--VN 314
+++L L D V D ++ ++ + T +E FG+ +EA+ PVI+ VN
Sbjct: 254 IEELGLEDYVFLKGYTRDLDEV--YQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVN 311
Query: 315 SGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQ 358
G P E + DG G+L + EA A+A+ +++++ +Q+FS+
Sbjct: 312 YG-PSEIIEDGENGYLVPKGDIEALAEAIIELLNDPKL-LQKFSE 354
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 372 |
| >gnl|CDD|131525 TIGR02472, sucr_P_syn_N, sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 294 EHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNI 352
E FG+ +EA C P++A + GGP++ + + R G L + + EA A A++ + +
Sbjct: 351 EPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQ- 409
Query: 353 IQQFSQFGFNRFNEKFSFQA 372
Q +S+ G +S+ A
Sbjct: 410 WQLWSRNGIEGVRRHYSWDA 429
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. Length = 439 |
| >gnl|CDD|234448 TIGR04047, MSMEG_0565_glyc, glycosyltransferase, MSMEG_0565 family | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 4e-05
Identities = 37/159 (23%), Positives = 65/159 (40%), Gaps = 20/159 (12%)
Query: 196 VFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGG-----YDPHNIENVEYY 250
L++ E +KN + + LR+R +LV+AGG YD Y
Sbjct: 195 YVLAVGGIEPRKNTIDLLEAFALLRARRPQ-----AQLVIAGGATLFDYDA-------YR 242
Query: 251 KELGVLVKKLKLSDNVLFLTSP-SDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRP 309
+E +L L + +T P DA +L++ + E FG+V +EA+ P
Sbjct: 243 REFEARAAELGLDPGAVVITGPVPDADLPALYRCADAFAFPSLKEGFGLVVLEALASGIP 302
Query: 310 VIAVNSGGPKESVVDGRTGFLCE-SNEEAFAKAMKKIVD 347
V+A + P + + S+ ++ A A+ +D
Sbjct: 303 VVA-SDIAPFTEYLGRFDAAWADPSDPDSIADALALALD 340
|
A conserved gene cluster found sporadically from Actinobacteria to Proteobacteria to Cyanobacteria features a radical SAM protein, an N-acetyltransferase, an oxidoreductase, and two additional proteins whose functional classes are unclear. The metabolic role of the cluster is probably biosynthetic. This glycosyltransferase, named from member MSMEG_0565 from Mycobacterium smegmatis, occurs in most but not all instances of the cluster [Unknown function, Enzymes of unknown specificity]. Length = 373 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 7e-05
Identities = 49/199 (24%), Positives = 72/199 (36%), Gaps = 19/199 (9%)
Query: 177 TTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVA 236
PI E +V ++ R + K+ + + L +L E ++LV+
Sbjct: 179 GDRSPILP--PDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLP-EGAERLRLVIV 235
Query: 237 G-GYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPS-NE 294
G G E + L LV D+V P+ + LF PS E
Sbjct: 236 GDGPARGACEQMVRAAGLAHLVWLPGERDDV-----PALMQALDLFVL-------PSLAE 283
Query: 295 HFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNE-EAFAKAMKKIVDNDGNII 353
+EAM PVIA GG E V G TG L + A A+A++ V +
Sbjct: 284 GISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAARR 343
Query: 354 QQFSQFGFNRFNEKFSFQA 372
G R ++FS A
Sbjct: 344 AH-GAAGRARAEQQFSINA 361
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 1e-04
Identities = 60/249 (24%), Positives = 105/249 (42%), Gaps = 24/249 (9%)
Query: 138 KIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVF 197
KI+V S+F K + + D + I+ E + + LN P ++ V
Sbjct: 142 KIIVPSQFLKKFYEERLPNAD---ISIVPNGFCLETYQSNPQPNLRQQLNISP--DETVL 196
Query: 198 LSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNI---ENVEYYKELG 254
L R K + L + + L + S+ +KLVV G DP E Y K++
Sbjct: 197 LYAGRISPDKGILLLMQAFEKLATAHSN-----LKLVVVG--DPTASSKGEKAAYQKKVL 249
Query: 255 VLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSN--EHFGIVPIEAMFCKRPVIA 312
K++ +L P K+ + ++ PS E F +V +EAM +PV+A
Sbjct: 250 EAAKRIGDRCIMLGGQPPE---KMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLA 306
Query: 313 VNSGGPKESVVDGRTGF-LCES-NEEAFAKAMKKIVDND--GNIIQQFSQFGFNRFNEKF 368
GG E V++G TG+ L E ++ + + + + I +Q F F++++ +
Sbjct: 307 STKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPELTQIAEQAKDFVFSKYSWEG 366
Query: 369 SFQAFSIQL 377
Q F Q+
Sbjct: 367 VTQRFEEQI 375
|
Length = 380 |
| >gnl|CDD|234452 TIGR04063, stp3, PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 300 PIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNE-EAFAKAMKKIVDND 349
P+EAM R V A + GG +E + DG TG L + + A A A+ ++DN
Sbjct: 311 PLEAMAQGRLVAASDVGGHRELIRDGETGVLFPAGDPAALAAALLALLDNR 361
|
PEP-CTERM/exosortase is a protein-sorting system associated with exopolysaccharide production. Members of this protein family are group 1 glycosyltransferases (see pfam00534) in which the overwhelming majority occur in species with the EpsH1 form of exosortase (see TIGR03109), and usually co-clustered with the exosortase. A typical member is Daro_2409 from Dechloromonas aromatica RCB. Length = 397 |
| >gnl|CDD|99983 cd03812, GT1_CapH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.003
Identities = 45/184 (24%), Positives = 72/184 (39%), Gaps = 29/184 (15%)
Query: 192 KEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYK 251
++ V + R+ +KN E I L + + KL++ G + E E K
Sbjct: 190 EDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPN-----AKLLLVG-----DGELEEEIK 239
Query: 252 ELGVLVKKLKLSDNVLFLTSPSDAAKI----SLFKFCHCIIYTPS-NEHFGIVPIEAMFC 306
+ VK+L L D V+FL +D ++ +F F PS E +V IEA
Sbjct: 240 KK---VKELGLEDKVIFLGVRNDVPELLQAMDVFLF-------PSLYEGLPLVLIEAQAS 289
Query: 307 KRPVIAVNSGGPKESVVDGRTGF--LCESNEEAFAKAMK-KIVDNDGNIIQQFSQFGFNR 363
P I ++ KE + F L ES E + +K K D + + G +
Sbjct: 290 GLPCI-LSDTITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDRRERSSESIKKKGLDA 348
Query: 364 FNEK 367
+E
Sbjct: 349 DDEA 352
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). Length = 358 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 390 | |||
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 100.0 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 100.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 100.0 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 100.0 | |
| KOG1111|consensus | 426 | 100.0 | ||
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 100.0 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 100.0 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 100.0 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 100.0 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 100.0 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 100.0 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 100.0 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 100.0 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 100.0 | |
| KOG0853|consensus | 495 | 100.0 | ||
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 100.0 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 100.0 | |
| KOG1387|consensus | 465 | 99.97 | ||
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.97 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.97 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.97 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.97 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.97 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.97 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.96 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.96 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.96 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.96 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.95 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.95 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.95 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.95 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.94 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.93 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.93 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.92 | |
| KOG2941|consensus | 444 | 99.91 | ||
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.9 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.9 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.89 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.88 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.85 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.85 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.84 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.83 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.8 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.75 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.73 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.72 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.72 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 99.71 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 99.68 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.68 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 99.66 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.66 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.66 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.64 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.61 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.6 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 99.54 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 99.42 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 99.41 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 99.4 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 99.39 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 99.37 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 99.36 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 99.33 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 99.33 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 99.26 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 99.25 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 99.24 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 99.23 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 99.18 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 99.17 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 99.15 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 99.13 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.13 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 99.12 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 98.91 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.81 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 98.79 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 98.72 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 98.63 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 98.6 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 98.59 | |
| KOG3742|consensus | 692 | 98.55 | ||
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 98.55 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 98.51 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 98.5 | |
| PLN02208 | 442 | glycosyltransferase family protein | 98.48 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 98.25 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 98.24 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 98.13 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 98.05 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 98.04 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 97.98 | |
| KOG1050|consensus | 732 | 97.88 | ||
| PLN02210 | 456 | UDP-glucosyl transferase | 97.85 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 97.84 | |
| PLN00414 | 446 | glycosyltransferase family protein | 97.79 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 97.78 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 97.78 | |
| PLN02764 | 453 | glycosyltransferase family protein | 97.78 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 97.62 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 97.58 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 97.52 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 97.5 | |
| KOG4626|consensus | 966 | 97.47 | ||
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 97.38 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 97.33 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 97.28 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 97.22 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 97.15 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 97.13 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 97.06 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 97.06 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 97.05 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 97.03 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 97.02 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 97.0 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 96.97 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 96.96 | |
| PF15024 | 559 | Glyco_transf_18: Glycosyltransferase family 18 | 96.94 | |
| PF10933 | 364 | DUF2827: Protein of unknown function (DUF2827); In | 96.92 | |
| COG2327 | 385 | WcaK Polysaccharide pyruvyl transferase family pro | 96.82 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 96.81 | |
| PF06925 | 169 | MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy | 96.8 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 96.74 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 96.71 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 96.49 | |
| PF04230 | 286 | PS_pyruv_trans: Polysaccharide pyruvyl transferase | 96.41 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 96.32 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 96.27 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 95.97 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 95.87 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 95.72 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 95.7 | |
| PF08660 | 170 | Alg14: Oligosaccharide biosynthesis protein Alg14 | 95.62 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 95.48 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 95.21 | |
| COG1887 | 388 | TagB Putative glycosyl/glycerophosphate transferas | 95.14 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 95.13 | |
| KOG1192|consensus | 496 | 95.1 | ||
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 94.82 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 94.71 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 94.2 | |
| PF03016 | 302 | Exostosin: Exostosin family; InterPro: IPR004263 H | 94.05 | |
| PF11997 | 268 | DUF3492: Domain of unknown function (DUF3492); Int | 93.54 | |
| PF04413 | 186 | Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid | 92.97 | |
| PF12038 | 168 | DUF3524: Domain of unknown function (DUF3524); Int | 92.89 | |
| PF11071 | 141 | DUF2872: Protein of unknown function (DUF2872); In | 92.81 | |
| KOG1021|consensus | 464 | 91.69 | ||
| TIGR03646 | 144 | YtoQ_fam YtoQ family protein. Members of this fami | 91.64 | |
| KOG0780|consensus | 483 | 89.21 | ||
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 87.01 | |
| smart00672 | 256 | CAP10 Putative lipopolysaccharide-modifying enzyme | 85.08 | |
| COG5017 | 161 | Uncharacterized conserved protein [Function unknow | 83.22 | |
| KOG3349|consensus | 170 | 83.09 | ||
| PF12996 | 79 | DUF3880: DUF based on E. rectale Gene description | 82.4 | |
| PF05686 | 395 | Glyco_transf_90: Glycosyl transferase family 90; I | 82.22 | |
| PRK00676 | 338 | hemA glutamyl-tRNA reductase; Validated | 81.6 |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-49 Score=358.58 Aligned_cols=368 Identities=51% Similarity=0.851 Sum_probs=291.8
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCc------cccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHC------FKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS 74 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (390)
.||+++++.+| ++|.++||+|+++... ..+...+++.++....+.+...+.....+..+++.........+.+
T Consensus 12 ~gG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (392)
T cd03805 12 IGGAERLVVDAALALQSRGHEVTIYTSHHDPSHCFEETKDGTLPVRVRGDWLPRSIFGRFHILCAYLRMLYLALYLLLLP 91 (392)
T ss_pred CchHHHHHHHHHHHHHhCCCeEEEEcCCCCchhcchhccCCeeEEEEEeEEEcchhhHhHHHHHHHHHHHHHHHHHHhcc
Confidence 59999999999 9999999999988211 1223333455666544444433333334444444443333322345
Q ss_pred -cCCCEEEEcccccchhHHHhhc-ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHH
Q psy12587 75 -EKPDLVFCDLVSICIPILQAKQ-FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQA 152 (390)
Q Consensus 75 -~~~Dvi~~~~~~~~~~~~~~~~-~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~ 152 (390)
.++|+||++......++..... .|+++++|.++..........+++++....++++++++.+|.++++|+..++.+.+
T Consensus 92 ~~~~Dvi~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~~~~ 171 (392)
T cd03805 92 DEKYDVFIVDQVSACVPLLKLFSPSKILFYCHFPDQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASVFKK 171 (392)
T ss_pred cCCCCEEEEcCcchHHHHHHHhcCCcEEEEEecChHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHHHHH
Confidence 8999999998665555554444 89999999766544444445555666667788999999999999999999999988
Q ss_pred HhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhc---cccccc
Q psy12587 153 TFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRL---SDEMKT 229 (390)
Q Consensus 153 ~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~---~~~~~~ 229 (390)
.++.....++.+++||+|.+.+.+........... ..++.++++++|++.+.||++.+++++.++.++. ++
T Consensus 172 ~~~~~~~~~~~vi~n~vd~~~~~~~~~~~~~~~~~--~~~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~---- 245 (392)
T cd03805 172 TFPSLAKNPREVVYPCVDTDSFESTSEDPDPGLLI--PKSGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKN---- 245 (392)
T ss_pred HhcccccCCcceeCCCcCHHHcCcccccccccccc--cCCCceEEEEEeeecccCChHHHHHHHHHHHhhcccccC----
Confidence 77655334456999999988776543221111111 3347789999999999999999999999998876 54
Q ss_pred ceEEEEEcCCCCCCcchhHHHHHHHHHHHH-cCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCC
Q psy12587 230 HVKLVVAGGYDPHNIENVEYYKELGVLVKK-LKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKR 308 (390)
Q Consensus 230 ~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~-~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~ 308 (390)
++|+++|+++.....+..|.+++++.+++ +++.++|.|+|+++++++..+|+.||++++||..|+||++++|||+||+
T Consensus 246 -~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~ 324 (392)
T cd03805 246 -VRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGK 324 (392)
T ss_pred -eEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCC
Confidence 99999999887656666788999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHH
Q psy12587 309 PVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQL 377 (390)
Q Consensus 309 pvi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (390)
|||+++.++..|++.++.+|+++++|+++++++|.+++++++ .++++++++++.+.++|+|+.+++++
T Consensus 325 PvI~s~~~~~~e~i~~~~~g~~~~~~~~~~a~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 325 PVIACNSGGPLETVVDGETGFLCEPTPEEFAEAMLKLANDPD-LADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred CEEEECCCCcHHHhccCCceEEeCCCHHHHHHHHHHHHhChH-HHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 999999999999999999999987699999999999999998 99999999999998999999998763
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=343.80 Aligned_cols=372 Identities=17% Similarity=0.186 Sum_probs=274.4
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCc----c--ccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHC----F--KETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS 74 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~----~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (390)
.||+++++.+| ++|.++||+|+++... . ......++.+..+.... ..... ...+...+..+.......+++
T Consensus 19 ~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~ 96 (405)
T TIGR03449 19 AGGMNVYILETATELARRGIEVDIFTRATRPSQPPVVEVAPGVRVRNVVAGP-YEGLD-KEDLPTQLCAFTGGVLRAEAR 96 (405)
T ss_pred CCCceehHHHHHHHHhhCCCEEEEEecccCCCCCCccccCCCcEEEEecCCC-cccCC-HHHHHHHHHHHHHHHHHHHhh
Confidence 59999999999 9999999999998211 1 11123455666552211 11111 111111111111111111222
Q ss_pred ---cCCCEEEEcccccchh---HHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHH
Q psy12587 75 ---EKPDLVFCDLVSICIP---ILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKS 148 (390)
Q Consensus 75 ---~~~Dvi~~~~~~~~~~---~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~ 148 (390)
.+||+||+|.+..+.. +.+..++|+|+++|+.....................+.++.+++.+|.++++|+...+
T Consensus 97 ~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~ 176 (405)
T TIGR03449 97 HEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEAR 176 (405)
T ss_pred ccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHH
Confidence 5899999998544332 2334458999999975321110000000011112334567789999999999999998
Q ss_pred HHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccc
Q psy12587 149 VVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMK 228 (390)
Q Consensus 149 ~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~ 228 (390)
.+.+.++ .+.+++.++|||+|.+.+.+......+..++ ++ .++++|+++|++.+.||++.++++++.+.++.++
T Consensus 177 ~~~~~~~-~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~-~~-~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~--- 250 (405)
T TIGR03449 177 DLVRHYD-ADPDRIDVVAPGADLERFRPGDRATERARLG-LP-LDTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPD--- 250 (405)
T ss_pred HHHHHcC-CChhhEEEECCCcCHHHcCCCcHHHHHHhcC-CC-CCCcEEEEecCCCcccCHHHHHHHHHHHHhhCCC---
Confidence 8887665 3357899999999998876554444445443 22 3678899999999999999999999999876652
Q ss_pred cceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCC
Q psy12587 229 THVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKR 308 (390)
Q Consensus 229 ~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~ 308 (390)
.+++|+++|+.... +..+.++++++++++++.++|.|+|+++++++.++|+.||++++||..|++|++++|||++|+
T Consensus 251 ~~~~l~ivG~~~~~---g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~ 327 (405)
T TIGR03449 251 RNLRVIVVGGPSGS---GLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQACGT 327 (405)
T ss_pred cceEEEEEeCCCCC---cchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCC
Confidence 24899999964321 112337889999999998999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhh
Q psy12587 309 PVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLD 386 (390)
Q Consensus 309 pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (390)
|||+++.++..|++.++.+|+++++ |+++++++|.+++++++ .++++++++++.+ ++|+|+.+++++.++|.++++
T Consensus 328 Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~-~~~~~~~~~~~~~-~~fsw~~~~~~~~~~y~~~~~ 404 (405)
T TIGR03449 328 PVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDPR-TRIRMGAAAVEHA-AGFSWAATADGLLSSYRDALA 404 (405)
T ss_pred CEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999998 99999999999999988 8999999999887 789999999999999998764
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-45 Score=338.52 Aligned_cols=373 Identities=18% Similarity=0.266 Sum_probs=260.6
Q ss_pred CCcchhhhHhh-HhhhhcCC--ceeecCCcc------------ccccCCCcceEEeccccccccchhhHHHHHHHHHHHH
Q psy12587 2 LGATARLTITA-TAWGATGP--RTTAHDHCF------------KETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVI 66 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~--~V~~~~~~~------------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (390)
.||+++++.+| ++|.++|| +|++++... ......++.+.+++.. +.. .........++..+..
T Consensus 25 ~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~~~~~~~gv~v~r~~~~-~~~-~~~~~~~~~~~~~~~~ 102 (439)
T TIGR02472 25 TGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIERIAPGARIVRLPFG-PRR-YLRKELLWPYLDELAD 102 (439)
T ss_pred CCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCCeeEeCCCcEEEEecCC-CCC-CcChhhhhhhHHHHHH
Confidence 69999999999 99999997 888872111 1112356677766422 111 1111222233222222
Q ss_pred HHHHHHhh--cCCCEEEEcccccchhHH---HhhcccEEEEeecCCccccc---hhhh----hhhhcccch-hhHHHHHh
Q psy12587 67 ALYVAWYS--EKPDLVFCDLVSICIPIL---QAKQFKVLFYCHYPDQLLSK---QGSF----LKSIYRFPL-NKLEEWTT 133 (390)
Q Consensus 67 ~~~~~~~~--~~~Dvi~~~~~~~~~~~~---~~~~~~~v~~~h~~~~~~~~---~~~~----~~~~~~~~~-~~~~~~~~ 133 (390)
.....+.+ .+|||||+|++..++... +..++|+|++.|+....... .... ....+.... ...+++++
T Consensus 103 ~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (439)
T TIGR02472 103 NLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLLGVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETL 182 (439)
T ss_pred HHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHhCCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHH
Confidence 22222222 379999999865444333 33448999999974321100 0000 011111000 12467789
Q ss_pred cCcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccc----hhhhcCC-CCCCCCeEEEEeecccccCC
Q psy12587 134 CKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEP----IENVLNP-LPGKEDIVFLSINRYERKKN 208 (390)
Q Consensus 134 ~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~----~~~~~~~-l~~~~~~~i~~~g~~~~~K~ 208 (390)
+.+|.++++|+.........+.+.+.+++.+||||+|.+.|.+..... .+..+.. ....+.++|+++||+.+.||
T Consensus 183 ~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg 262 (439)
T TIGR02472 183 AHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEKPPILAISRPDRRKN 262 (439)
T ss_pred HhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHHHhhccccCCcEEEEEcCCcccCC
Confidence 999999999976544433333445578999999999998886543211 1111100 01225678999999999999
Q ss_pred HHHHHHHHHHHHhhcccccccceEEE-EEcCCCCCCc---chhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhc
Q psy12587 209 LELAIYSLNSLRSRLSDEMKTHVKLV-VAGGYDPHNI---ENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFC 284 (390)
Q Consensus 209 ~~~ll~a~~~l~~~~~~~~~~~~~l~-i~G~~~~~~~---~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~a 284 (390)
++.+++|++.+..... ...++ ++|+++.... ....+.+++..+++++++.++|.|.|+++.+++..+|+.|
T Consensus 263 ~~~li~A~~~l~~~~~-----~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~a 337 (439)
T TIGR02472 263 IPSLVEAYGRSPKLQE-----MANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLA 337 (439)
T ss_pred HHHHHHHHHhChhhhh-----hccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHHH
Confidence 9999999986532111 12333 5687654311 1123455677788999999999999999999999999987
Q ss_pred ----ceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHH
Q psy12587 285 ----HCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQF 359 (390)
Q Consensus 285 ----dv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~ 359 (390)
|++++||..|+||++++|||+||+|||+|+.++.+|++.++.+|+++++ |+++++++|.+++++++ .+++++++
T Consensus 338 ~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~~~-~~~~~~~~ 416 (439)
T TIGR02472 338 ARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSS-QWQLWSRN 416 (439)
T ss_pred hhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 99999999999999999 99999999
Q ss_pred HHHHHhhhcCHHHHHHHHHHHHH
Q psy12587 360 GFNRFNEKFSFQAFSIQLNTIVN 382 (390)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
+++.+.++|||+.+++++.++++
T Consensus 417 a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 417 GIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999899999999999998763
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-45 Score=332.36 Aligned_cols=280 Identities=14% Similarity=0.144 Sum_probs=235.6
Q ss_pred Hhh-cCCCEEEEcccccchhHHHhh-----cccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHh
Q psy12587 72 WYS-EKPDLVFCDLVSICIPILQAK-----QFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEF 145 (390)
Q Consensus 72 ~~~-~~~Dvi~~~~~~~~~~~~~~~-----~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~ 145 (390)
+.+ .+||+||+|....+.....+. +.|+++++|+.+......... .....+..++++|.++++|+.
T Consensus 113 ~~~~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~~--------~~~~~~~~~~~ad~vv~~S~~ 184 (406)
T PRK15427 113 VATPFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLNH--------YTPEYQQLFRRGDLMLPISDL 184 (406)
T ss_pred hhccCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhhh--------hhHHHHHHHHhCCEEEECCHH
Confidence 445 889999999976544433332 247788999865432111110 112335567899999999999
Q ss_pred HHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhccc
Q psy12587 146 TKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSD 225 (390)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~ 225 (390)
.++.+.+. +.+.+++.++|||+|.+.|.+.... ..++++.|+++||+.+.||++.+++|++.+.+++++
T Consensus 185 ~~~~l~~~--g~~~~ki~vi~nGvd~~~f~~~~~~---------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~ 253 (406)
T PRK15427 185 WAGRLQKM--GCPPEKIAVSRMGVDMTRFSPRPVK---------APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVA 253 (406)
T ss_pred HHHHHHHc--CCCHHHEEEcCCCCCHHHcCCCccc---------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCC
Confidence 99998774 4446899999999999887643211 123567899999999999999999999999887775
Q ss_pred ccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCC------CCCCcc
Q psy12587 226 EMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSN------EHFGIV 299 (390)
Q Consensus 226 ~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~------e~~~~~ 299 (390)
+++.|+|+|+.. +++++.++++++.++|.|+|+++++++.++|+.||++++||.. ||+|++
T Consensus 254 -----~~l~ivG~G~~~--------~~l~~~~~~~~l~~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~ 320 (406)
T PRK15427 254 -----FRYRILGIGPWE--------RRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVA 320 (406)
T ss_pred -----EEEEEEECchhH--------HHHHHHHHHcCCCCeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHH
Confidence 999999999765 8899999999999999999999999999999999999999974 999999
Q ss_pred HHhhhhcCCCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhc-CChhHHHHHHHHHHHHHhhhcCHHHHHHHH
Q psy12587 300 PIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVD-NDGNIIQQFSQFGFNRFNEKFSFQAFSIQL 377 (390)
Q Consensus 300 ~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (390)
++|||+||+|||+|+.+|.+|++.++.+|+++++ |+++++++|.++++ |++ .+++|++++++.+.++|+|+.+++++
T Consensus 321 llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~-~~~~~~~~ar~~v~~~f~~~~~~~~l 399 (406)
T PRK15427 321 LMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTD-ELAPVVKRAREKVETDFNQQVINREL 399 (406)
T ss_pred HHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHH-HHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 9999999999999999999999999999999998 99999999999999 888 89999999999999999999999999
Q ss_pred HHHHHhh
Q psy12587 378 NTIVNNM 384 (390)
Q Consensus 378 ~~~~~~~ 384 (390)
.++|+++
T Consensus 400 ~~~~~~~ 406 (406)
T PRK15427 400 ASLLQAL 406 (406)
T ss_pred HHHHhhC
Confidence 9999763
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-45 Score=334.86 Aligned_cols=364 Identities=12% Similarity=0.096 Sum_probs=271.4
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecC-C-cc--------------ccccCCCcceEEeccccccccchhhHHHHHHHHHH
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHD-H-CF--------------KETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMI 64 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~-~-~~--------------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (390)
.||++.++.+| ++|.++||+|+++. . .. .+....++.+.+++.+.+... ..+..+.....+.
T Consensus 14 ~~g~~~~~~~l~~~L~~~G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~~~~~-~~~~~~~~~~~~~ 92 (412)
T PRK10307 14 LTGIGKYTGEMAEWLAARGHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLYVPKQP-SGLKRLLHLGSFA 92 (412)
T ss_pred ccchhhhHHHHHHHHHHCCCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccccCCCCc-cHHHHHHHHHHHH
Confidence 58999999999 99999999999982 1 11 112234566666643322111 1122222222222
Q ss_pred HHHHHHHHh--hcCCCEEEEcccccc-----hhHHHhhcccEEEEeecCCccccchhh-hhhhhcccchhhHHHHHhcCc
Q psy12587 65 VIALYVAWY--SEKPDLVFCDLVSIC-----IPILQAKQFKVLFYCHYPDQLLSKQGS-FLKSIYRFPLNKLEEWTTCKA 136 (390)
Q Consensus 65 ~~~~~~~~~--~~~~Dvi~~~~~~~~-----~~~~~~~~~~~v~~~h~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a 136 (390)
.......+. +.+||+||+|.+... ..+.+..++|+|+++|+.......... ........+..++++++++.+
T Consensus 93 ~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (412)
T PRK10307 93 LSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRF 172 (412)
T ss_pred HHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhC
Confidence 211111111 178999999875422 223344458999999875432111111 112223334556888999999
Q ss_pred ceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCcc---chhhhcCCCCCCCCeEEEEeecccccCCHHHHH
Q psy12587 137 DKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPE---PIENVLNPLPGKEDIVFLSINRYERKKNLELAI 213 (390)
Q Consensus 137 d~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll 213 (390)
|.++++|+.+++.+.+. +.+..++.++|||+|.+.+.+.... ..++.++ ..++.++++|+|++.+.||++.++
T Consensus 173 d~ii~~S~~~~~~~~~~--~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~G~l~~~kg~~~li 248 (412)
T PRK10307 173 DNVSTISRSMMNKAREK--GVAAEKVIFFPNWSEVARFQPVADADVDALRAQLG--LPDGKKIVLYSGNIGEKQGLELVI 248 (412)
T ss_pred CEEEecCHHHHHHHHHc--CCCcccEEEECCCcCHhhcCCCCccchHHHHHHcC--CCCCCEEEEEcCccccccCHHHHH
Confidence 99999999999998775 3446789999999998877654321 2444443 233678999999999999999999
Q ss_pred HHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCC
Q psy12587 214 YSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSN 293 (390)
Q Consensus 214 ~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~ 293 (390)
+|++.+.+ .+ +++|+|+|+|+.. +++++++++++++ +|.|+|+++.+++.++|+.||++++||..
T Consensus 249 ~a~~~l~~-~~-----~~~l~ivG~g~~~--------~~l~~~~~~~~l~-~v~f~G~~~~~~~~~~~~~aDi~v~ps~~ 313 (412)
T PRK10307 249 DAARRLRD-RP-----DLIFVICGQGGGK--------ARLEKMAQCRGLP-NVHFLPLQPYDRLPALLKMADCHLLPQKA 313 (412)
T ss_pred HHHHHhcc-CC-----CeEEEEECCChhH--------HHHHHHHHHcCCC-ceEEeCCCCHHHHHHHHHhcCEeEEeecc
Confidence 99998854 45 3999999999765 8899999999985 79999999999999999999999999998
Q ss_pred CC----CCccHHhhhhcCCCEEEecCCC--cccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhh
Q psy12587 294 EH----FGIVPIEAMFCKRPVIAVNSGG--PKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNE 366 (390)
Q Consensus 294 e~----~~~~~~Ea~a~G~pvi~~~~~~--~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 366 (390)
|+ +|.+++|||+||+|||+|+.+| ..+++. .+|+++++ |+++++++|.+++++++ .+++|++++++.+.+
T Consensus 314 e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~~~~~-~~~~~~~~a~~~~~~ 390 (412)
T PRK10307 314 GAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALARQAL-LRPKLGTVAREYAER 390 (412)
T ss_pred CcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHH
Confidence 87 5667899999999999999876 457776 58999998 99999999999999998 999999999999988
Q ss_pred hcCHHHHHHHHHHHHHhhhhhc
Q psy12587 367 KFSFQAFSIQLNTIVNNMLDKK 388 (390)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~ 388 (390)
+|||+.+++++.++|++++.++
T Consensus 391 ~fs~~~~~~~~~~~~~~~~~~~ 412 (412)
T PRK10307 391 TLDKENVLRQFIADIRGLVAER 412 (412)
T ss_pred HcCHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999988753
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-45 Score=332.71 Aligned_cols=347 Identities=16% Similarity=0.180 Sum_probs=262.6
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCcc-----ccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHCF-----KETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS- 74 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 74 (390)
.||+++++..+ ++|.++||+|+++.... .+....++.+..++...... ...+......+.. . ...++
T Consensus 13 ~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~v~~~p~~~~~~-~~~~~~~~~~~~~----l-~~~~~~ 86 (398)
T cd03796 13 LGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGIRYLTNGLKVYYLPFVVFYN-QSTLPTFFGTFPL----L-RNILIR 86 (398)
T ss_pred cccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCcccccCceeEEEecceeccC-CccccchhhhHHH----H-HHHHHh
Confidence 59999999999 99999999999882111 11223345555553211100 0011111111111 1 12333
Q ss_pred cCCCEEEEcccccch-----hHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHH
Q psy12587 75 EKPDLVFCDLVSICI-----PILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSV 149 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~-----~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 149 (390)
.+||+||+|++.... .+.+..++|+|++.|+....... . .....++.++.++++|.++++|+...+.
T Consensus 87 ~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~----~----~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 158 (398)
T cd03796 87 ERITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADA----S----SIHTNKLLRFSLADVDHVICVSHTSKEN 158 (398)
T ss_pred cCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccch----h----hHHhhHHHHHhhccCCEEEEecHhHhhH
Confidence 899999999854332 22334459999999974321100 0 1112345567789999999999998886
Q ss_pred HHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhccccccc
Q psy12587 150 VQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKT 229 (390)
Q Consensus 150 ~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~ 229 (390)
+.... +.+.+++.++|||+|.+.+.+.... ..++.++++++||+.+.||++.+++|++.+.++.++
T Consensus 159 ~~~~~-~~~~~k~~vi~ngvd~~~f~~~~~~---------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~---- 224 (398)
T cd03796 159 TVLRA-SLDPERVSVIPNAVDSSDFTPDPSK---------RDNDKITIVVISRLVYRKGIDLLVGIIPEICKKHPN---- 224 (398)
T ss_pred HHHHh-CCChhhEEEEcCccCHHHcCCCccc---------CCCCceEEEEEeccchhcCHHHHHHHHHHHHhhCCC----
Confidence 54432 2346789999999998877653221 123678999999999999999999999999888775
Q ss_pred ceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCC
Q psy12587 230 HVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRP 309 (390)
Q Consensus 230 ~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~p 309 (390)
++|+++|+++.. +.++++++++++.++|.|.|+++++++..+|+.||++++||..|++|++++|||+||+|
T Consensus 225 -~~l~i~G~g~~~--------~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~P 295 (398)
T cd03796 225 -VRFIIGGDGPKR--------ILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGLL 295 (398)
T ss_pred -EEEEEEeCCchH--------HHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCCC
Confidence 999999998754 78999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhhh
Q psy12587 310 VIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDK 387 (390)
Q Consensus 310 vi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (390)
||+++.++.+|++.++. ++++++|.++++++|.++++++. ....+.+++++.+.++|||+.+++++.++|++++..
T Consensus 296 VI~s~~gg~~e~i~~~~-~~~~~~~~~~l~~~l~~~l~~~~-~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~~ 371 (398)
T cd03796 296 VVSTRVGGIPEVLPPDM-ILLAEPDVESIVRKLEEAISILR-TGKHDPWSFHNRVKKMYSWEDVAKRTEKVYDRILQT 371 (398)
T ss_pred EEECCCCCchhheeCCc-eeecCCCHHHHHHHHHHHHhChh-hhhhHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhcC
Confidence 99999999999998764 44444499999999999999877 666778889999999999999999999999998764
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=328.29 Aligned_cols=369 Identities=23% Similarity=0.282 Sum_probs=285.1
Q ss_pred CCcchhhhHhh-HhhhhcCCc--eeecC-Ccc---ccc---cCCCcce---------EE-eccccccccchhhHHHHHHH
Q psy12587 2 LGATARLTITA-TAWGATGPR--TTAHD-HCF---KET---KDGTLPV---------KV-IGDWLPRNIFGKFYALCMYL 61 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~--V~~~~-~~~---~~~---~~~~~~i---------~~-~~~~~~~~~~~~~~~~~~~~ 61 (390)
.||+||++... .+|.++|++ |++++ +.. ++. ....+.+ .. ...|++...++++..+.+.+
T Consensus 46 ggG~ERvl~~a~~~l~~~~~~~~v~iyt~~~d~~~~~~l~~~~~~~~i~~~~~~~~v~l~~~~~~~~~~~~~~t~~~~~~ 125 (463)
T PLN02949 46 GGGGERVLWCAVRAIQEENPDLDCVIYTGDHDASPDSLAARARDRFGVELLSPPKVVHLRKRKWIEEETYPRFTMIGQSL 125 (463)
T ss_pred CCChhhHHHHHHHHHHhhCCCCeEEEEcCCCCCCHHHHHHHHHhhcceecCCCceEEEeccccccccccCCceehHHHHH
Confidence 36999999999 999999995 66662 211 110 1112223 22 35788888888888888888
Q ss_pred HHHHHHHHHHHhhcCCCEEEEcc--cccchhHHHhhcccEEEEeecCCcccc-------------------c--hhhhhh
Q psy12587 62 RMIVIALYVAWYSEKPDLVFCDL--VSICIPILQAKQFKVLFYCHYPDQLLS-------------------K--QGSFLK 118 (390)
Q Consensus 62 ~~~~~~~~~~~~~~~~Dvi~~~~--~~~~~~~~~~~~~~~v~~~h~~~~~~~-------------------~--~~~~~~ 118 (390)
+.++..+.. +.+..|| |++.+ .++.++++++.+.|+++++|.|+.... . .....+
T Consensus 126 ~~~~l~~~~-~~~~~p~-v~vDt~~~~~~~pl~~~~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k 203 (463)
T PLN02949 126 GSVYLAWEA-LCKFTPL-YFFDTSGYAFTYPLARLFGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCK 203 (463)
T ss_pred HHHHHHHHH-HHhcCCC-EEEeCCCcccHHHHHHhcCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHH
Confidence 887776665 2224555 55554 346778888778999999998754320 0 013344
Q ss_pred hhcccchhhHHHHHhcCcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEE
Q psy12587 119 SIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFL 198 (390)
Q Consensus 119 ~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 198 (390)
.+++..+.+++.+..+.||.++++|+++++.+.+.++. ..++.+++||+|.+.+...+.. ...+...++
T Consensus 204 ~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~~~~--~~~i~vvyp~vd~~~~~~~~~~---------~~~~~~~il 272 (463)
T PLN02949 204 ILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRI--PERIKRVYPPCDTSGLQALPLE---------RSEDPPYII 272 (463)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHHcCC--CCCeEEEcCCCCHHHcccCCcc---------ccCCCCEEE
Confidence 55666666778888899999999999999999887653 3578999999987655322110 112456789
Q ss_pred EeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHH
Q psy12587 199 SINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKI 278 (390)
Q Consensus 199 ~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~ 278 (390)
++||+.++||++.+|+|+..+.++.++ ..++++|+|+|++... ++..|.+++++++++++++++|.|+|+++++++.
T Consensus 273 ~vGR~~~~Kg~~llI~A~~~l~~~~~~-~~~~~~LvIvG~~~~~--~~~~~~~eL~~la~~l~L~~~V~f~g~v~~~el~ 349 (463)
T PLN02949 273 SVAQFRPEKAHALQLEAFALALEKLDA-DVPRPKLQFVGSCRNK--EDEERLQKLKDRAKELGLDGDVEFHKNVSYRDLV 349 (463)
T ss_pred EEEeeeccCCHHHHHHHHHHHHHhccc-cCCCcEEEEEeCCCCc--ccHHHHHHHHHHHHHcCCCCcEEEeCCCCHHHHH
Confidence 999999999999999999988754221 0124999999988532 3446778999999999999999999999999999
Q ss_pred HHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcc-cceec---CcceeeecCCHHHHHHHHHHHhcCChhHHH
Q psy12587 279 SLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPK-ESVVD---GRTGFLCESNEEAFAKAMKKIVDNDGNIIQ 354 (390)
Q Consensus 279 ~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~-e~i~~---~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~ 354 (390)
++|+.||++++|+..|+||++++|||++|+|||+++.||.. |++.+ +.+|++++ |+++++++|.++++++++.++
T Consensus 350 ~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~-~~~~la~ai~~ll~~~~~~r~ 428 (463)
T PLN02949 350 RLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT-TVEEYADAILEVLRMRETERL 428 (463)
T ss_pred HHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC-CHHHHHHHHHHHHhCCHHHHH
Confidence 99999999999999999999999999999999999998864 67665 56899987 999999999999986543788
Q ss_pred HHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhhhc
Q psy12587 355 QFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKK 388 (390)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (390)
+|++++++.+ ++|||+.+++++.+.+++++++.
T Consensus 429 ~m~~~ar~~~-~~FS~e~~~~~~~~~i~~l~~~~ 461 (463)
T PLN02949 429 EIAAAARKRA-NRFSEQRFNEDFKDAIRPILNSA 461 (463)
T ss_pred HHHHHHHHHH-HHcCHHHHHHHHHHHHHHHHhhh
Confidence 9999999998 78999999999999999987653
|
|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-45 Score=330.65 Aligned_cols=358 Identities=25% Similarity=0.321 Sum_probs=278.2
Q ss_pred CCcchhhhHhh-Hhhhhc--CCceeec-CC--------------ccccccCCCcceEEe---ccccccccchhhHHHHHH
Q psy12587 2 LGATARLTITA-TAWGAT--GPRTTAH-DH--------------CFKETKDGTLPVKVI---GDWLPRNIFGKFYALCMY 60 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~--G~~V~~~-~~--------------~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~~~~~ 60 (390)
.||+||++.+. .+|.++ ||+|+++ +. ++.+...+++.+..+ ..+.+.+.++++..+.++
T Consensus 13 ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 92 (419)
T cd03806 13 GGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLVEASTYPRFTLLGQA 92 (419)
T ss_pred CCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeeeccccCCceeeHHHH
Confidence 36999999999 999998 7889988 22 333444455564343 366777777887777777
Q ss_pred HHHHHHHHHHHHhhcCCCEEEEcc-cccchhHHHh-hcccEEEEeecC----Cccccc--------------hh---hhh
Q psy12587 61 LRMIVIALYVAWYSEKPDLVFCDL-VSICIPILQA-KQFKVLFYCHYP----DQLLSK--------------QG---SFL 117 (390)
Q Consensus 61 ~~~~~~~~~~~~~~~~~Dvi~~~~-~~~~~~~~~~-~~~~~v~~~h~~----~~~~~~--------------~~---~~~ 117 (390)
+..+...+.. +.+.+||||+.+. ++..+++.++ .+.|+|+++|.| +..... .. ...
T Consensus 93 ~~~~~~~~~~-~~~~~pDv~i~~~g~~~~~~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (419)
T cd03806 93 LGSMILGLEA-LLKLVPDIFIDTMGYPFTYPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKA 171 (419)
T ss_pred HHHHHHHHHH-HHhcCCCEEEEcCCcccHHHHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHH
Confidence 7766555443 2236899999987 5566676665 458999999977 332110 01 245
Q ss_pred hhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEE
Q psy12587 118 KSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVF 197 (390)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i 197 (390)
+.+++.++.+++++.++.||.++++|+++++.+.+.++. .+++.+++||+|.+.+.+.... ...+..+|
T Consensus 172 k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~--~~~~~vi~~gvd~~~~~~~~~~---------~~~~~~~i 240 (419)
T cd03806 172 KLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWKR--NTKPSIVYPPCDVEELLKLPLD---------EKTRENQI 240 (419)
T ss_pred HHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhCc--CCCcEEEcCCCCHHHhcccccc---------cccCCcEE
Confidence 566777777899999999999999999999999987652 2489999999998766543210 12356789
Q ss_pred EEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHH
Q psy12587 198 LSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAK 277 (390)
Q Consensus 198 ~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~ 277 (390)
+|+||+.+.||++.+++|+..+.+..++....+++++|+|++... ++..|.++++++++++++.++|.|+|.++++++
T Consensus 241 l~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~--~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l 318 (419)
T cd03806 241 LSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE--DDEKRVEDLKLLAKELGLEDKVEFVVNAPFEEL 318 (419)
T ss_pred EEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc--ccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHH
Confidence 999999999999999999999988765211124999999987543 234577899999999999999999999999999
Q ss_pred HHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCc-cccee---cCcceeeecCCHHHHHHHHHHHhcCChhHH
Q psy12587 278 ISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGP-KESVV---DGRTGFLCESNEEAFAKAMKKIVDNDGNII 353 (390)
Q Consensus 278 ~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~-~e~i~---~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~ 353 (390)
..+|+.||++++|+..|+||++++|||+||+|||+++.+|. .+++. ++.+|++++ |+++++++|.++++++++.+
T Consensus 319 ~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~-d~~~la~ai~~ll~~~~~~~ 397 (419)
T cd03806 319 LEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS-TAEEYAEAIEKILSLSEEER 397 (419)
T ss_pred HHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC-CHHHHHHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999999999998764 57887 789999987 99999999999999887244
Q ss_pred HHHHHHHHHHHhhhcCHHHHHH
Q psy12587 354 QQFSQFGFNRFNEKFSFQAFSI 375 (390)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~ 375 (390)
+.+ .++++.+.++||++.+.+
T Consensus 398 ~~~-~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 398 LRI-RRAARSSVKRFSDEEFER 418 (419)
T ss_pred HHH-HHHHHHHHHhhCHHHhcc
Confidence 445 555555668999998753
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-44 Score=342.32 Aligned_cols=377 Identities=15% Similarity=0.178 Sum_probs=274.5
Q ss_pred CCcchhhhHhh-HhhhhcC--CceeecCCccc---------cc-----------------cCCCcceEEeccccccccch
Q psy12587 2 LGATARLTITA-TAWGATG--PRTTAHDHCFK---------ET-----------------KDGTLPVKVIGDWLPRNIFG 52 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G--~~V~~~~~~~~---------~~-----------------~~~~~~i~~~~~~~~~~~~~ 52 (390)
+||.-.++.+| ++|+++| |+|.+++.... +. ...++.|.+++. -|...+-
T Consensus 194 tGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~~~~~~~~~~~g~rIvRip~-GP~~~~l 272 (1050)
T TIGR02468 194 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSENDGDEMGESSGAYIIRIPF-GPRDKYI 272 (1050)
T ss_pred CCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccccccccccccccccCCCCeEEEEecc-CCCCCCc
Confidence 59999999999 9999998 89999811110 00 113555555532 1221111
Q ss_pred hhHHHHHHHHHHHHHHHHHHh-------------h-cCCCEEEEcccccchhHHHhhc---ccEEEEeecCCccccc---
Q psy12587 53 KFYALCMYLRMIVIALYVAWY-------------S-EKPDLVFCDLVSICIPILQAKQ---FKVLFYCHYPDQLLSK--- 112 (390)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~-------------~-~~~Dvi~~~~~~~~~~~~~~~~---~~~v~~~h~~~~~~~~--- 112 (390)
.-..++.++..+.......+. + ..||+||+|.+.++..++.+++ +|+|+|.|+.......
T Consensus 273 ~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll 352 (1050)
T TIGR02468 273 PKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLL 352 (1050)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhc
Confidence 112233333333322222111 1 2499999999877776665554 9999999975321110
Q ss_pred hhh-----hhhhhcc-cchhhHHHHHhcCcceEEEccHhHHHHHHHHhccCC---------------------CCceeec
Q psy12587 113 QGS-----FLKSIYR-FPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLD---------------------HKCLDIL 165 (390)
Q Consensus 113 ~~~-----~~~~~~~-~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~---------------------~~~~~vi 165 (390)
..+ .....+. ......|..++..||.||+.|...++.+...|+.++ ..++.||
T Consensus 353 ~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VI 432 (1050)
T TIGR02468 353 KQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVI 432 (1050)
T ss_pred ccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEe
Confidence 000 0000111 111245788999999999999999998777775432 2389999
Q ss_pred CCCCCCCCCCCCCccc---------------------hhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcc
Q psy12587 166 YPSVYTEGLEKTTPEP---------------------IENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLS 224 (390)
Q Consensus 166 ~~~~~~~~~~~~~~~~---------------------~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~ 224 (390)
|||+|++.|.+..... ++..+ ...+.++|+++||+.+.||++.+|+|+..+++...
T Consensus 433 PpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~---~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~ 509 (1050)
T TIGR02468 433 PPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMRFF---TNPRKPMILALARPDPKKNITTLVKAFGECRPLRE 509 (1050)
T ss_pred CCCCcHHHccCCCccccchhcccccccccccchhhHHHHhhc---ccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhcc
Confidence 9999999887643211 11111 23356789999999999999999999999875322
Q ss_pred cccccceEEEEEcCCCCCCc---chhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhc----ceEEeCCCCCCCC
Q psy12587 225 DEMKTHVKLVVAGGYDPHNI---ENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFC----HCIIYTPSNEHFG 297 (390)
Q Consensus 225 ~~~~~~~~l~i~G~~~~~~~---~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~a----dv~v~ps~~e~~~ 297 (390)
. .++. +|+|.++.... ....+..+++++++++++.++|.|.|+++..++..+|+.| |+|++||.+|+||
T Consensus 510 ~---~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFG 585 (1050)
T TIGR02468 510 L---ANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFG 585 (1050)
T ss_pred C---CCEE-EEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCC
Confidence 1 1355 46676643211 1234567889999999999999999999999999999988 6999999999999
Q ss_pred ccHHhhhhcCCCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHH
Q psy12587 298 IVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQ 376 (390)
Q Consensus 298 ~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (390)
++++||||||+|||+|+.||..|++.++.+|+++++ |+++++++|.+++++++ .+++|++++++.+ ++|+|+.++++
T Consensus 586 LvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dpe-lr~~m~~~gr~~v-~~FSWe~ia~~ 663 (1050)
T TIGR02468 586 LTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQ-LWAECRQNGLKNI-HLFSWPEHCKT 663 (1050)
T ss_pred HHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCHH-HHHHHHHHHHHHH-HHCCHHHHHHH
Confidence 999999999999999999999999999999999999 99999999999999999 9999999999998 68999999999
Q ss_pred HHHHHHhhhhhc
Q psy12587 377 LNTIVNNMLDKK 388 (390)
Q Consensus 377 ~~~~~~~~~~~~ 388 (390)
+++.+..+..++
T Consensus 664 yl~~i~~~~~~~ 675 (1050)
T TIGR02468 664 YLSRIASCRPRH 675 (1050)
T ss_pred HHHHHHHHhccC
Confidence 999999887553
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-44 Score=320.65 Aligned_cols=345 Identities=18% Similarity=0.248 Sum_probs=260.0
Q ss_pred CCCcchhhhHhh-HhhhhcCCceeec---CC--ccccccCCCcceEEecccc-ccccchhhHHH--HHHHHHHHHHHHHH
Q psy12587 1 MLGATARLTITA-TAWGATGPRTTAH---DH--CFKETKDGTLPVKVIGDWL-PRNIFGKFYAL--CMYLRMIVIALYVA 71 (390)
Q Consensus 1 ~~GG~~~~~~~l-~~L~~~G~~V~~~---~~--~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~ 71 (390)
..||+|+++..+ +.|.. +||++ .. ...+....++.+++++... ....+.++..+ ..+...+.. ...
T Consensus 19 ~~g~ve~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 93 (380)
T PRK15484 19 GAAAVETWIYQVAKRTSI---PNRIACIKNPGYPEYTKVNDNCDIHYIGFSRIYKRLFQKWTRLDPLPYSQRILN--IAH 93 (380)
T ss_pred cccHHHHHHHHhhhhccC---CeeEEEecCCCCCchhhccCCCceEEEEeccccchhhhhhhccCchhHHHHHHH--HHH
Confidence 369999999999 99953 88888 11 2222445567888873211 11111121111 111111111 011
Q ss_pred Hhh-cCCCEEEEcccccchhHHHh--hcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHH
Q psy12587 72 WYS-EKPDLVFCDLVSICIPILQA--KQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKS 148 (390)
Q Consensus 72 ~~~-~~~Dvi~~~~~~~~~~~~~~--~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~ 148 (390)
..+ .++|+||+|+........+. .+.|+++++|+... ...+.+++.++++|+..++
T Consensus 94 ~~~~~~~~vi~v~~~~~~~~~~~~~~~~~~~v~~~h~~~~---------------------~~~~~~~~~ii~~S~~~~~ 152 (380)
T PRK15484 94 KFTITKDSVIVIHNSMKLYRQIRERAPQAKLVMHMHNAFE---------------------PELLDKNAKIIVPSQFLKK 152 (380)
T ss_pred hcCCCCCcEEEEeCcHHhHHHHHhhCCCCCEEEEEecccC---------------------hhHhccCCEEEEcCHHHHH
Confidence 233 67999999985433322222 23799999996311 1123467999999999999
Q ss_pred HHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccc
Q psy12587 149 VVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMK 228 (390)
Q Consensus 149 ~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~ 228 (390)
.+.+.++ ..++.++|||+|.+.+.+......++.++ ...+..+++|+||+.+.||++.+++|++.+.++.|+
T Consensus 153 ~~~~~~~---~~~i~vIpngvd~~~~~~~~~~~~~~~~~--~~~~~~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~--- 224 (380)
T PRK15484 153 FYEERLP---NADISIVPNGFCLETYQSNPQPNLRQQLN--ISPDETVLLYAGRISPDKGILLLMQAFEKLATAHSN--- 224 (380)
T ss_pred HHHhhCC---CCCEEEecCCCCHHHcCCcchHHHHHHhC--CCCCCeEEEEeccCccccCHHHHHHHHHHHHHhCCC---
Confidence 9888644 56899999999988776644444444444 223568899999999999999999999999988885
Q ss_pred cceEEEEEcCCCCCCc-chhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCC-CCCCccHHhhhhc
Q psy12587 229 THVKLVVAGGYDPHNI-ENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSN-EHFGIVPIEAMFC 306 (390)
Q Consensus 229 ~~~~l~i~G~~~~~~~-~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~-e~~~~~~~Ea~a~ 306 (390)
++|+|+|+++.... +...|.+++++++++++ +++.|+|+++.+++..+|+.||++++||.+ |+||++++|||+|
T Consensus 225 --~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~--~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~ 300 (380)
T PRK15484 225 --LKLVVVGDPTASSKGEKAAYQKKVLEAAKRIG--DRCIMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAA 300 (380)
T ss_pred --eEEEEEeCCccccccchhHHHHHHHHHHHhcC--CcEEEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHc
Confidence 99999998865322 23456678888887775 579999999999999999999999999985 9999999999999
Q ss_pred CCCEEEecCCCcccceecCcceee-ecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhh
Q psy12587 307 KRPVIAVNSGGPKESVVDGRTGFL-CES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNM 384 (390)
Q Consensus 307 G~pvi~~~~~~~~e~i~~~~~g~~-~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (390)
|+|||+|+.+|.+|++.++.+|++ +++ |+++++++|.++++|++ . .++++++++.+.++|+|+.+++++.++|++.
T Consensus 301 G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~-~-~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 301 GKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPE-L-TQIAEQAKDFVFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred CCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHH-H-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999984 566 99999999999999887 5 6799999999889999999999999999875
Q ss_pred h
Q psy12587 385 L 385 (390)
Q Consensus 385 ~ 385 (390)
.
T Consensus 379 ~ 379 (380)
T PRK15484 379 F 379 (380)
T ss_pred c
Confidence 4
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-44 Score=323.37 Aligned_cols=349 Identities=16% Similarity=0.153 Sum_probs=259.8
Q ss_pred CCcchhhhHhh-HhhhhcCCceeec--C--Ccc-ccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAH--D--HCF-KETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS- 74 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~--~--~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 74 (390)
.||+|+++.+| ++|.+.||+++++ . ... .+....++.+..+... ....+..+.... .+++
T Consensus 13 ~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~l~---------~~l~~ 79 (374)
T TIGR03088 13 VGGLENGLVNLINHLPADRYRHAVVALTEVSAFRKRIQRPDVAFYALHKQ----PGKDVAVYPQLY---------RLLRQ 79 (374)
T ss_pred CCcHHHHHHHHHhhccccccceEEEEcCCCChhHHHHHhcCceEEEeCCC----CCCChHHHHHHH---------HHHHH
Confidence 59999999999 9999999997666 1 111 1223345555555321 111111111111 2344
Q ss_pred cCCCEEEEcccccch--hHHHhhcccE-EEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHH
Q psy12587 75 EKPDLVFCDLVSICI--PILQAKQFKV-LFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQ 151 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~--~~~~~~~~~~-v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 151 (390)
.+||+||+|+..... .+.+..++|. +.+.|+.+........ ....++.+...+.+|.++++|+..++.+.
T Consensus 80 ~~~Divh~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~i~vs~~~~~~~~ 152 (374)
T TIGR03088 80 LRPDIVHTRNLAALEAQLPAALAGVPARIHGEHGRDVFDLDGSN-------WKYRWLRRLYRPLIHHYVAVSRDLEDWLR 152 (374)
T ss_pred hCCCEEEEcchhHHHHHHHHHhcCCCeEEEeecCcccccchhhH-------HHHHHHHHHHHhcCCeEEEeCHHHHHHHH
Confidence 899999999854322 2233334553 4444543221111111 11234445566778999999999999998
Q ss_pred HHhccCCCCceeecCCCCCCCCCCCCCccc--hhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhccccccc
Q psy12587 152 ATFRSLDHKCLDILYPSVYTEGLEKTTPEP--IENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKT 229 (390)
Q Consensus 152 ~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~ 229 (390)
+.++ .+..++.++|||+|.+.+.+..... ..+.. ...++.++++++||+.+.||++.+++|+..+.++.++ ...
T Consensus 153 ~~~~-~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~-~~~ 228 (374)
T TIGR03088 153 GPVK-VPPAKIHQIYNGVDTERFHPSRGDRSPILPPD--FFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPE-GAE 228 (374)
T ss_pred HhcC-CChhhEEEeccCccccccCCCccchhhhhHhh--cCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcc-ccc
Confidence 8764 3367899999999988776542111 11111 1234678999999999999999999999999877552 011
Q ss_pred ceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCC
Q psy12587 230 HVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRP 309 (390)
Q Consensus 230 ~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~p 309 (390)
+++|+++|+|+.. +++++.++++++.+++.+.|+. .++.++|+.||++++||..||+|++++|||+||+|
T Consensus 229 ~~~l~i~G~g~~~--------~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~P 298 (374)
T TIGR03088 229 RLRLVIVGDGPAR--------GACEQMVRAAGLAHLVWLPGER--DDVPALMQALDLFVLPSLAEGISNTILEAMASGLP 298 (374)
T ss_pred ceEEEEecCCchH--------HHHHHHHHHcCCcceEEEcCCc--CCHHHHHHhcCEEEeccccccCchHHHHHHHcCCC
Confidence 4899999998765 7899999999998999999965 45689999999999999999999999999999999
Q ss_pred EEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhh
Q psy12587 310 VIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNML 385 (390)
Q Consensus 310 vi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
||+|+.++.+|++.++.+|+++++ |+++++++|.+++++++ .+..+++++++.+.++|+|+.+++++.++|++++
T Consensus 299 vv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~-~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~ 374 (374)
T TIGR03088 299 VIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPA-ARRAHGAAGRARAEQQFSINAMVAAYAGLYDQLL 374 (374)
T ss_pred EEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhC
Confidence 999999999999999999999998 99999999999999988 8999999999999899999999999999998864
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-43 Score=328.82 Aligned_cols=297 Identities=16% Similarity=0.208 Sum_probs=231.6
Q ss_pred cCCCEEEEcccccchh--HHH-------hhcccEEEEeecCCccccchhhhhh------hhc---cc----chh--hHHH
Q psy12587 75 EKPDLVFCDLVSICIP--ILQ-------AKQFKVLFYCHYPDQLLSKQGSFLK------SIY---RF----PLN--KLEE 130 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~--~~~-------~~~~~~v~~~h~~~~~~~~~~~~~~------~~~---~~----~~~--~~~~ 130 (390)
.+|||||+|+|.+++. ++. +.++|+|+|+|+..+.......... ..+ .. ... .+.+
T Consensus 609 ~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK 688 (977)
T PLN02939 609 KKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVK 688 (977)
T ss_pred CCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHH
Confidence 6999999999987763 222 1227999999987543211110000 000 00 001 1224
Q ss_pred HHhcCcceEEEccHhHHHHHHHHhc-------cCCCCceeecCCCCCCCCCCCCCc-------------------cchhh
Q psy12587 131 WTTCKADKIVVNSEFTKSVVQATFR-------SLDHKCLDILYPSVYTEGLEKTTP-------------------EPIEN 184 (390)
Q Consensus 131 ~~~~~ad~ii~~s~~~~~~~~~~~~-------~~~~~~~~vi~~~~~~~~~~~~~~-------------------~~~~~ 184 (390)
..+..||.|+++|+..++.+...++ .....++.+|+||+|.+.|.+... ..+++
T Consensus 689 ~GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRk 768 (977)
T PLN02939 689 GAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRK 768 (977)
T ss_pred HHHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHH
Confidence 4566799999999999999876322 123578999999999998876532 23555
Q ss_pred hcCCCCC--CCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCC
Q psy12587 185 VLNPLPG--KEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKL 262 (390)
Q Consensus 185 ~~~~l~~--~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l 262 (390)
.++ ++. .+.++|+++||+.+.||++.+++|+..+.+. +++|+|+|+|+.. .|...++.+++++++
T Consensus 769 elG-L~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~-------dvqLVIvGdGp~~-----~~e~eL~~La~~l~l 835 (977)
T PLN02939 769 QLG-LSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAEL-------GGQFVLLGSSPVP-----HIQREFEGIADQFQS 835 (977)
T ss_pred HhC-CCcccccceEEEEeecCCcccChHHHHHHHHHHhhc-------CCEEEEEeCCCcH-----HHHHHHHHHHHHcCC
Confidence 565 443 2568899999999999999999999988653 3899999999653 445788899999998
Q ss_pred CCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceec---------CcceeeecC
Q psy12587 263 SDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVD---------GRTGFLCES 333 (390)
Q Consensus 263 ~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~---------~~~g~~~~~ 333 (390)
.++|.|+|..++.....+|+.||++++||.+|+||++++|||+||+|+|++++||..|.+.+ +.+|+++++
T Consensus 836 ~drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~ 915 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLT 915 (977)
T ss_pred CCeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecC
Confidence 89999999999887789999999999999999999999999999999999999999998865 578999998
Q ss_pred -CHHHHHHHHHHHhc----CChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhhhc
Q psy12587 334 -NEEAFAKAMKKIVD----NDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKK 388 (390)
Q Consensus 334 -~~~~l~~~i~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (390)
|+++++++|.++++ +++ .+++|++++. .+.|||+.++++|.++|++++.+.
T Consensus 916 ~D~eaLa~AL~rAL~~~~~dpe-~~~~L~~~am---~~dFSWe~~A~qYeeLY~~ll~~~ 971 (977)
T PLN02939 916 PDEQGLNSALERAFNYYKRKPE-VWKQLVQKDM---NIDFSWDSSASQYEELYQRAVARA 971 (977)
T ss_pred CCHHHHHHHHHHHHHHhccCHH-HHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHhh
Confidence 99999999998875 667 8888887653 378999999999999999988653
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=326.19 Aligned_cols=363 Identities=16% Similarity=0.171 Sum_probs=258.0
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCccccc-----------------------cCCCcceEEecccc--ccc-cchhh
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHCFKET-----------------------KDGTLPVKVIGDWL--PRN-IFGKF 54 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~~~~~-----------------------~~~~~~i~~~~~~~--~~~-~~~~~ 54 (390)
+||...++..| ++|+++||+|+++.+.+... ..+++.+..+.... .+. .++..
T Consensus 16 ~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~v~~~~~~~~~~~y~~~ 95 (466)
T PRK00654 16 TGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRLDLFTVLFGHLEGDGVPVYLIDAPHLFDRPSGYGYP 95 (466)
T ss_pred cCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhhcCceEEEEeeeEEEEEEeEEcCCceEEEEeCHHHcCCCCCCCCc
Confidence 79999999999 99999999999882222111 12345555543211 111 11111
Q ss_pred HHHHHHHHHHHHHHHHHHhh--cCCCEEEEcccccchhHHHhh--------cccEEEEeecCCccccchhhhhhhh----
Q psy12587 55 YALCMYLRMIVIALYVAWYS--EKPDLVFCDLVSICIPILQAK--------QFKVLFYCHYPDQLLSKQGSFLKSI---- 120 (390)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~--~~~Dvi~~~~~~~~~~~~~~~--------~~~~v~~~h~~~~~~~~~~~~~~~~---- 120 (390)
....++. .+.......+.+ .+|||||+|.+.+++....++ ++|+|+|+|+...............
T Consensus 96 d~~~r~~-~f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~ 174 (466)
T PRK00654 96 DNGERFA-FFSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPA 174 (466)
T ss_pred ChHHHHH-HHHHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCCh
Confidence 1111111 111111111222 599999999987766444332 4899999998653211110000000
Q ss_pred ----cccc----hhhHHHHHhcCcceEEEccHhHHHHHHHHh-c-------cCCCCceeecCCCCCCCCCCCCCc-----
Q psy12587 121 ----YRFP----LNKLEEWTTCKADKIVVNSEFTKSVVQATF-R-------SLDHKCLDILYPSVYTEGLEKTTP----- 179 (390)
Q Consensus 121 ----~~~~----~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~-~-------~~~~~~~~vi~~~~~~~~~~~~~~----- 179 (390)
...+ ...+.+..++.||.|+++|+..++.+.... + ..+..++.+||||+|.+.+.+...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~ 254 (466)
T PRK00654 175 EAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAA 254 (466)
T ss_pred HHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccCCccCccccc
Confidence 0000 113446678999999999999998887521 1 123568999999999998876432
Q ss_pred --------------cchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcc
Q psy12587 180 --------------EPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIE 245 (390)
Q Consensus 180 --------------~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~ 245 (390)
..+++.++ ++.++.++|+++||+.+.||++.+++|++++.++ +++|+|+|+|+.
T Consensus 255 ~~~~~~~~~k~~~k~~l~~~~g-l~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~-------~~~lvivG~g~~---- 322 (466)
T PRK00654 255 NYSADDLEGKAENKRALQERFG-LPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ-------GGQLVLLGTGDP---- 322 (466)
T ss_pred ccChhhhhchHHHHHHHHHHhC-CCCCCCcEEEEeeccccccChHHHHHHHHHHHhc-------CCEEEEEecCcH----
Confidence 12344444 4434678899999999999999999999998764 389999998753
Q ss_pred hhHHHHHHHHHHHHcCCCCcEEE-ecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceec
Q psy12587 246 NVEYYKELGVLVKKLKLSDNVLF-LTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVD 324 (390)
Q Consensus 246 ~~~y~~~~~~~~~~~~l~~~v~~-~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~ 324 (390)
.+.+++++++++++ .++.+ .|+ +.+.+..+|+.||++++||.+|+||++++|||+||+|+|+++.||+.|.+.+
T Consensus 323 --~~~~~l~~l~~~~~--~~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~ 397 (466)
T PRK00654 323 --ELEEAFRALAARYP--GKVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVID 397 (466)
T ss_pred --HHHHHHHHHHHHCC--CcEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeec
Confidence 34478888888886 45654 565 6666678999999999999999999999999999999999999999999988
Q ss_pred C------cceeeecC-CHHHHHHHHHHHhc---CChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhh
Q psy12587 325 G------RTGFLCES-NEEAFAKAMKKIVD---NDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLD 386 (390)
Q Consensus 325 ~------~~g~~~~~-~~~~l~~~i~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (390)
+ .+|+++++ |+++++++|.++++ +++ .+.++++++. .+.|||+.+++++.++|+++++
T Consensus 398 ~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~-~~~~~~~~~~---~~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 398 YNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPP-LWRALQRQAM---AQDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred CCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHH-HHHHHHHHHh---ccCCChHHHHHHHHHHHHHHhh
Confidence 8 89999999 99999999999876 566 6777877764 3689999999999999999875
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-43 Score=317.62 Aligned_cols=348 Identities=21% Similarity=0.289 Sum_probs=262.7
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCC--ccc-cccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cC
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDH--CFK-ETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EK 76 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~--~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (390)
.||+++++.++ ++|.+.||+|+++.. ... .....++.+..... . ..+.... ..+...... ....+++ .+
T Consensus 11 ~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~-~~~~~~~~~-~l~~~i~~~~ 84 (371)
T cd04962 11 YGGSGVVATELGKALARRGHEVHFITSSRPFRLDEYSPNIFFHEVEV--P--QYPLFQY-PPYDLALAS-KIAEVAKRYK 84 (371)
T ss_pred CCCccchHHHHHHHHHhcCCceEEEecCCCcchhhhccCeEEEEecc--c--ccchhhc-chhHHHHHH-HHHHHHhcCC
Confidence 69999999999 999999999998821 111 11112222222211 0 0000000 000011111 1123445 89
Q ss_pred CCEEEEcccccch----hHHHhh---cccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHH
Q psy12587 77 PDLVFCDLVSICI----PILQAK---QFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSV 149 (390)
Q Consensus 77 ~Dvi~~~~~~~~~----~~~~~~---~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 149 (390)
||+||+|.+.... ...+.. ++|+|+++|+.+...... ......+.+..++++|.++++|+..++.
T Consensus 85 ~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~--------~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 156 (371)
T cd04962 85 LDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDITLVGQ--------DPSFQPATRFSIEKSDGVTAVSESLRQE 156 (371)
T ss_pred ccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccccccc--------cccchHHHHHHHhhCCEEEEcCHHHHHH
Confidence 9999999743221 122222 489999999754321111 1122345677889999999999999999
Q ss_pred HHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhccccccc
Q psy12587 150 VQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKT 229 (390)
Q Consensus 150 ~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~ 229 (390)
+.+.+. . ..++.++|||++...+.+......+..++ ...+.++++++|++.+.||++.+++++..+.++.
T Consensus 157 ~~~~~~-~-~~~i~vi~n~~~~~~~~~~~~~~~~~~~~--~~~~~~~il~~g~l~~~K~~~~li~a~~~l~~~~------ 226 (371)
T cd04962 157 TYELFD-I-TKEIEVIPNFVDEDRFRPKPDEALKRRLG--APEGEKVLIHISNFRPVKRIDDVIRIFAKVRKEV------ 226 (371)
T ss_pred HHHhcC-C-cCCEEEecCCcCHhhcCCCchHHHHHhcC--CCCCCeEEEEecccccccCHHHHHHHHHHHHhcC------
Confidence 888753 2 57899999999987766544333333433 2336788999999999999999999999997653
Q ss_pred ceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCC
Q psy12587 230 HVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRP 309 (390)
Q Consensus 230 ~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~p 309 (390)
+++++++|.++.. +.+++.++++++.++|.+.|+.+ ++.++|+.||++++||..|++|++++|||++|+|
T Consensus 227 ~~~l~i~G~g~~~--------~~~~~~~~~~~~~~~v~~~g~~~--~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~P 296 (371)
T cd04962 227 PARLLLVGDGPER--------SPAERLARELGLQDDVLFLGKQD--HVEELLSIADLFLLPSEKESFGLAALEAMACGVP 296 (371)
T ss_pred CceEEEEcCCcCH--------HHHHHHHHHcCCCceEEEecCcc--cHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCCC
Confidence 3899999998765 78888999999988999999875 5689999999999999999999999999999999
Q ss_pred EEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhh
Q psy12587 310 VIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNM 384 (390)
Q Consensus 310 vi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (390)
||+++.++..|++.++.+|+++++ |++++++++.+++++++ .+.+|++++++.+.++|+|+.+++++.++|+++
T Consensus 297 vI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~-~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 297 VVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDE-LWQEFSRAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred EEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 999999999999999999999998 99999999999999998 999999999999889999999999999999864
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-43 Score=328.48 Aligned_cols=352 Identities=14% Similarity=0.144 Sum_probs=256.8
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecC--CccccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cCC
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHD--HCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EKP 77 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 77 (390)
+||+++++.++ ++|.++||+|+++. ....+. ..++.+..... .+........ ..+ ........+++ .+|
T Consensus 73 ~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~~~~-~~g~~v~~~~~-~~~~~~~~~~--~~~---~~~~~l~~~i~~~kp 145 (465)
T PLN02871 73 VSGYKNRFQNFIRYLREMGDEVLVVTTDEGVPQE-FHGAKVIGSWS-FPCPFYQKVP--LSL---ALSPRIISEVARFKP 145 (465)
T ss_pred cccHHHHHHHHHHHHHHCCCeEEEEecCCCCCcc-ccCceeeccCC-cCCccCCCce--eec---cCCHHHHHHHHhCCC
Confidence 59999999999 99999999999882 111111 12222221111 0000000000 000 00001112444 899
Q ss_pred CEEEEcccccch----hHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHH
Q psy12587 78 DLVFCDLVSICI----PILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQAT 153 (390)
Q Consensus 78 Dvi~~~~~~~~~----~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 153 (390)
|+||+|++.... .+.+..++|+|+++|+......... ......+. ...+++++++.+|.++++|+..++.+.+.
T Consensus 146 DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~-~~~~~~~~-~~~~~r~~~~~ad~ii~~S~~~~~~l~~~ 223 (465)
T PLN02871 146 DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRY-TFSWLVKP-MWDIIRFLHRAADLTLVTSPALGKELEAA 223 (465)
T ss_pred CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcc-cchhhHHH-HHHHHHHHHhhCCEEEECCHHHHHHHHHc
Confidence 999999854222 1234445999999996432211100 01111111 12455778899999999999999999876
Q ss_pred hccCCCCceeecCCCCCCCCCCCCCc-cchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceE
Q psy12587 154 FRSLDHKCLDILYPSVYTEGLEKTTP-EPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVK 232 (390)
Q Consensus 154 ~~~~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~ 232 (390)
+ ..+.+++.++|||+|.+.+.+... ...+..+. ....+.++|+|+|++.+.||++.++++++.+. +++
T Consensus 224 ~-~~~~~kv~vi~nGvd~~~f~p~~~~~~~~~~~~-~~~~~~~~i~~vGrl~~~K~~~~li~a~~~~~---------~~~ 292 (465)
T PLN02871 224 G-VTAANRIRVWNKGVDSESFHPRFRSEEMRARLS-GGEPEKPLIVYVGRLGAEKNLDFLKRVMERLP---------GAR 292 (465)
T ss_pred C-CCCcCeEEEeCCccCccccCCccccHHHHHHhc-CCCCCCeEEEEeCCCchhhhHHHHHHHHHhCC---------CcE
Confidence 3 223578999999999988765432 22333321 01235678999999999999999999988753 389
Q ss_pred EEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEE
Q psy12587 233 LVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIA 312 (390)
Q Consensus 233 l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~ 312 (390)
|+|+|+|+.. ++++++++. .+|.|+|+++++++..+|+.||++|+||..|++|++++|||+||+|||+
T Consensus 293 l~ivG~G~~~--------~~l~~~~~~----~~V~f~G~v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G~PVI~ 360 (465)
T PLN02871 293 LAFVGDGPYR--------EELEKMFAG----TPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMASGVPVVA 360 (465)
T ss_pred EEEEeCChHH--------HHHHHHhcc----CCeEEeccCCHHHHHHHHHHCCEEEECCcccccCcHHHHHHHcCCCEEE
Confidence 9999988654 777777764 4799999999999999999999999999999999999999999999999
Q ss_pred ecCCCcccceec---CcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHH-HHHhhhhh
Q psy12587 313 VNSGGPKESVVD---GRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNT-IVNNMLDK 387 (390)
Q Consensus 313 ~~~~~~~e~i~~---~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 387 (390)
++.++..|++.+ +.+|+++++ |+++++++|.+++++++ .+++|++++++.+ ++|+|+.+++++.+ .|++++..
T Consensus 361 s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~-~~~~~~~~a~~~~-~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 361 ARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPE-LRERMGAAAREEV-EKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred cCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999998 999999998 99999999999999998 9999999999988 68999999999998 69887653
|
|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-43 Score=319.22 Aligned_cols=364 Identities=19% Similarity=0.272 Sum_probs=267.8
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCC--c--cc--cccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDH--C--FK--ETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS 74 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~--~--~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (390)
.||+++++.+| ++|.++||+|+++.. . .. .....++.+..+... +...... ..+..+...+.......+.+
T Consensus 20 ~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 97 (398)
T cd03800 20 TGGQNVYVLELARALARLGHEVDIFTRRIDDALPPIVELAPGVRVVRVPAG-PAEYLPK-EELWPYLDEFADDLLRFLRR 97 (398)
T ss_pred CCceeehHHHHHHHHhccCceEEEEEecCCcccCCccccccceEEEecccc-cccCCCh-hhcchhHHHHHHHHHHHHHh
Confidence 58999999999 999999999998811 1 11 122334555544221 1111110 11111111122222222222
Q ss_pred c--CCCEEEEcccccchhHH---HhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHH
Q psy12587 75 E--KPDLVFCDLVSICIPIL---QAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSV 149 (390)
Q Consensus 75 ~--~~Dvi~~~~~~~~~~~~---~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 149 (390)
. +||+||+|.+..++... +..++|+|++.|+.......................++.+++.+|.++++|+..++.
T Consensus 98 ~~~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 177 (398)
T cd03800 98 EGGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEE 177 (398)
T ss_pred cCCCccEEEEecCccchHHHHHHhhcCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHH
Confidence 4 99999999865544333 333489999999754322111100000011122345678899999999999999999
Q ss_pred HHHHhccCCCCceeecCCCCCCCCCCCCCccch-hhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccc
Q psy12587 150 VQATFRSLDHKCLDILYPSVYTEGLEKTTPEPI-ENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMK 228 (390)
Q Consensus 150 ~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~ 228 (390)
+.+.+... ..++.++|||+|.+.+.+...... +.... ...++++|+|+||+...||++.+++++..+.++.++
T Consensus 178 ~~~~~~~~-~~~~~vi~ng~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~--- 251 (398)
T cd03800 178 LYSLYGAY-PRRIRVVPPGVDLERFTPYGRAEARRARLL--RDPDKPRILAVGRLDPRKGIDTLIRAYAELPELRER--- 251 (398)
T ss_pred HHHHcccc-ccccEEECCCCCccceecccchhhHHHhhc--cCCCCcEEEEEcccccccCHHHHHHHHHHHHHhCCC---
Confidence 88876432 456999999999887765432211 22221 234678899999999999999999999999987765
Q ss_pred cceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCC
Q psy12587 229 THVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKR 308 (390)
Q Consensus 229 ~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~ 308 (390)
++|+++|++..... ..+...++.+++.+++.+++.++|+++.+++..+++.||++++||..|++|++++|||++|+
T Consensus 252 --~~l~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~ 327 (398)
T cd03800 252 --ANLVIVGGPRDDIL--AMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMACGL 327 (398)
T ss_pred --eEEEEEECCCCcch--hhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhCCEEEecccccccCcHHHHHHhcCC
Confidence 99999998875421 22335578888889988999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHH
Q psy12587 309 PVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLN 378 (390)
Q Consensus 309 pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (390)
|||+++.++..+++.++.+|+++++ |+++++++|.+++++++ .++++++++++.+.++|||+.+++++.
T Consensus 328 Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 328 PVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPA-LRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred CEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 9999999999999999999999998 99999999999999988 999999999999989999999999875
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-43 Score=317.34 Aligned_cols=360 Identities=18% Similarity=0.214 Sum_probs=265.3
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCccccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cCCCE
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EKPDL 79 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dv 79 (390)
.||+++++.+| ++|.++ |+|+++..........++.+.....+... ......+......+. .... .+||+
T Consensus 15 ~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~di 86 (388)
T TIGR02149 15 YGGAGVHVEELTRELARL-MDVDVRCFGDQRFDSEGLTVKGYRPWSEL------KEANKALGTFSVDLA-MANDPVDADV 86 (388)
T ss_pred cccHhHHHHHHHHHHHHh-cCeeEEcCCCchhcCCCeEEEEecChhhc------cchhhhhhhhhHHHH-HhhCCCCCCe
Confidence 49999999999 999886 66555511111122334555544322111 111111111111111 1122 57999
Q ss_pred EEEcccccchh---HHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHHhcc
Q psy12587 80 VFCDLVSICIP---ILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRS 156 (390)
Q Consensus 80 i~~~~~~~~~~---~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~ 156 (390)
||+|++...+. +.+..++|+|++.|+............... ..+..++++..++.+|.++++|+.+++.+.+.+++
T Consensus 87 vh~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~ 165 (388)
T TIGR02149 87 VHSHTWYTFLAGHLAKKLYDKPLVVTAHSLEPLRPWKEEQLGGG-YKLSSWAEKTAIEAADRVIAVSGGMREDILKYYPD 165 (388)
T ss_pred EeecchhhhhHHHHHHHhcCCCEEEEeecccccccccccccccc-hhHHHHHHHHHHhhCCEEEEccHHHHHHHHHHcCC
Confidence 99998654432 223445999999998643211100000111 12345678888999999999999999999988755
Q ss_pred CCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEE
Q psy12587 157 LDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVA 236 (390)
Q Consensus 157 ~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~ 236 (390)
.+..++.++|||+|.+.+.+......+..++ ...+.++++|+||+.+.||++.++++++.+.. +++++++
T Consensus 166 ~~~~~i~vi~ng~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--------~~~l~i~ 235 (388)
T TIGR02149 166 LDPEKVHVIYNGIDTKEYKPDDGNVVLDRYG--IDRSRPYILFVGRITRQKGVPHLLDAVHYIPK--------DVQVVLC 235 (388)
T ss_pred CCcceEEEecCCCChhhcCCCchHHHHHHhC--CCCCceEEEEEcccccccCHHHHHHHHHHHhh--------cCcEEEE
Confidence 5567899999999998877654444455554 23367789999999999999999999998854 3788888
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHcCC-CCcEEEe-cCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEec
Q psy12587 237 GGYDPHNIENVEYYKELGVLVKKLKL-SDNVLFL-TSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVN 314 (390)
Q Consensus 237 G~~~~~~~~~~~y~~~~~~~~~~~~l-~~~v~~~-g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~ 314 (390)
|+++.. ..+.+++++.+.+++. .+++.+. |.++.+++..+|+.||++++||..|++|++++|||+||+|||+++
T Consensus 236 g~g~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~ 311 (388)
T TIGR02149 236 AGAPDT----PEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPVVASA 311 (388)
T ss_pred eCCCCc----HHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCCCEEEeC
Confidence 876543 2344667777777665 2346664 679999999999999999999999999999999999999999999
Q ss_pred CCCcccceecCcceeeecC-CH------HHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhh
Q psy12587 315 SGGPKESVVDGRTGFLCES-NE------EAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNML 385 (390)
Q Consensus 315 ~~~~~e~i~~~~~g~~~~~-~~------~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
.++..|++.++.+|+++++ |. ++++++|.+++++++ .+++|++++++.+.++|+|+.+++++.++|++++
T Consensus 312 ~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 312 TGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPE-LAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred CCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 9999999999999999988 87 999999999999998 9999999999999899999999999999999864
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=330.68 Aligned_cols=355 Identities=13% Similarity=0.080 Sum_probs=259.6
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCccccc--------------------------cCCCcceEEeccc---cccc-c
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHCFKET--------------------------KDGTLPVKVIGDW---LPRN-I 50 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~~~~~--------------------------~~~~~~i~~~~~~---~~~~-~ 50 (390)
+||...++..| ++|+++||+|.++.+.+... ...++.+..+... ..+. .
T Consensus 603 vGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~GV~vyfl~~~~~~F~r~~~ 682 (1036)
T PLN02316 603 VGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFGKVEGLSVYFLEPQNGMFWAGCV 682 (1036)
T ss_pred cCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEEEECCcEEEEEeccccccCCCCC
Confidence 69999999999 99999999998882222110 0112333333211 0000 0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhh--cCCCEEEEcccccchhHHHh---------hcccEEEEeecCCccccchhhhhhh
Q psy12587 51 FGKFYALCMYLRMIVIALYVAWYS--EKPDLVFCDLVSICIPILQA---------KQFKVLFYCHYPDQLLSKQGSFLKS 119 (390)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~Dvi~~~~~~~~~~~~~~---------~~~~~v~~~h~~~~~~~~~~~~~~~ 119 (390)
+.......++..+... ....+.+ .+|||||+|+|.+++....+ .++|+|+++|+.....
T Consensus 683 Yg~~Dd~~RF~~F~~A-ale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~~~~--------- 752 (1036)
T PLN02316 683 YGCRNDGERFGFFCHA-ALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEFGA--------- 752 (1036)
T ss_pred CCchhHHHHHHHHHHH-HHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcccch---------
Confidence 1111112222222111 1112222 68999999998766543322 2279999999854210
Q ss_pred hcccchhhHHHHHhcCcceEEEccHhHHHHHHHHhcc-CCCCceeecCCCCCCCCCCCCCc-------------------
Q psy12587 120 IYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRS-LDHKCLDILYPSVYTEGLEKTTP------------------- 179 (390)
Q Consensus 120 ~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~-~~~~~~~vi~~~~~~~~~~~~~~------------------- 179 (390)
...+..+..||.|+++|+..++.+...+.- ....++.+|+||||.+.|.+...
T Consensus 753 -------n~lk~~l~~AD~ViTVS~tya~EI~~~~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~ 825 (1036)
T PLN02316 753 -------NHIGKAMAYADKATTVSPTYSREVSGNSAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAA 825 (1036)
T ss_pred -------hHHHHHHHHCCEEEeCCHHHHHHHHhccCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhh
Confidence 112356788999999999999988774321 12478999999999987765321
Q ss_pred -cchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHH
Q psy12587 180 -EPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVK 258 (390)
Q Consensus 180 -~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~ 258 (390)
..+++.++ ++..+.++|+++||+.+.||++.+++|+..+.+. +++|+|+|+|+.. .+...++++++
T Consensus 826 k~~Lr~~lG-L~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~-------~~qlVIvG~Gpd~-----~~e~~l~~La~ 892 (1036)
T PLN02316 826 KEALQQRLG-LKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER-------NGQVVLLGSAPDP-----RIQNDFVNLAN 892 (1036)
T ss_pred HHHHHHHhC-CCcccCeEEEEEeccccccCHHHHHHHHHHHhhc-------CcEEEEEeCCCCH-----HHHHHHHHHHH
Confidence 12344554 4433678999999999999999999999998753 3899999998653 45578889999
Q ss_pred HcCC--CCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceecC-----------
Q psy12587 259 KLKL--SDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDG----------- 325 (390)
Q Consensus 259 ~~~l--~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~----------- 325 (390)
++++ +++|.|.+..+......+|+.||++++||.+|+||++.+|||+||+|+|++++||++|.+.++
T Consensus 893 ~Lg~~~~~rV~f~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g 972 (1036)
T PLN02316 893 QLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQG 972 (1036)
T ss_pred HhCccCCCeEEEEecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccc
Confidence 8865 578999887766544589999999999999999999999999999999999999999999874
Q ss_pred --cceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhh
Q psy12587 326 --RTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLD 386 (390)
Q Consensus 326 --~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (390)
.+|+++++ |+++++.+|.+++.+..+....++..+++.+.+.|||+..+++|.++|+++.+
T Consensus 973 ~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~~ 1036 (1036)
T PLN02316 973 LEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSARK 1036 (1036)
T ss_pred cCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhC
Confidence 58999999 99999999999998743156667888888888899999999999999998753
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=308.87 Aligned_cols=364 Identities=14% Similarity=0.108 Sum_probs=247.2
Q ss_pred cchhhhHhh-HhhhhcCCceeecCCccccccCCCcceEEeccccccc--cchhhHHHHHHHH---HHHHHHHHHHhh-cC
Q psy12587 4 ATARLTITA-TAWGATGPRTTAHDHCFKETKDGTLPVKVIGDWLPRN--IFGKFYALCMYLR---MIVIALYVAWYS-EK 76 (390)
Q Consensus 4 G~~~~~~~l-~~L~~~G~~V~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~-~~ 76 (390)
+.+-...+| ++|.++||+|++++.........++.+..+....... ...........+. ...........+ .+
T Consensus 8 ~~p~~~~~la~~L~~~G~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (396)
T cd03818 8 NFPGQFRHLAPALAAQGHEVVFLTEPNAAPPPGGVRVVRYRPPRGPTSGTHPYLREFEEAVLRGQAVARALLALRAKGFR 87 (396)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEecCCCCCCCCCeeEEEecCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 344456789 9999999999998222221111256666664332211 1111111111111 111111111134 78
Q ss_pred CCEEEEccccc-chhHHHhhc-ccEEEEeecCCccccc----hhhhhhhh--ccc--chhhHHHHHhcCcceEEEccHhH
Q psy12587 77 PDLVFCDLVSI-CIPILQAKQ-FKVLFYCHYPDQLLSK----QGSFLKSI--YRF--PLNKLEEWTTCKADKIVVNSEFT 146 (390)
Q Consensus 77 ~Dvi~~~~~~~-~~~~~~~~~-~~~v~~~h~~~~~~~~----~~~~~~~~--~~~--~~~~~~~~~~~~ad~ii~~s~~~ 146 (390)
||+||+|.... ++.+..... .|+|.++|.+...... ......+. ... ....+....++.+|.++++|+..
T Consensus 88 pdvi~~h~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~ 167 (396)
T cd03818 88 PDVIVAHPGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAGVSPTRWQ 167 (396)
T ss_pred CCEEEECCccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEEECCCHHH
Confidence 99999998543 333333323 7888777532111000 00000000 000 01112456789999999999999
Q ss_pred HHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeec-ccccCCHHHHHHHHHHHHhhccc
Q psy12587 147 KSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINR-YERKKNLELAIYSLNSLRSRLSD 225 (390)
Q Consensus 147 ~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~-~~~~K~~~~ll~a~~~l~~~~~~ 225 (390)
++.+.+.++ +++.+||||+|.+.+.+.............-..+.++++|+|| +.+.||++.+++|+..+.++.++
T Consensus 168 ~~~~~~~~~----~ki~vI~ngvd~~~f~~~~~~~~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~ 243 (396)
T cd03818 168 RSTFPAELR----SRISVIHDGIDTDRLRPDPQARLRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPD 243 (396)
T ss_pred HhhCcHhhc----cceEEeCCCccccccCCCchhhhcccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCC
Confidence 998877543 6899999999998887643321111000001135678899997 99999999999999999888775
Q ss_pred ccccceEEEEEcCCCCCC----cchhHHHHHHHHHHH-HcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccH
Q psy12587 226 EMKTHVKLVVAGGYDPHN----IENVEYYKELGVLVK-KLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVP 300 (390)
Q Consensus 226 ~~~~~~~l~i~G~~~~~~----~~~~~y~~~~~~~~~-~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~ 300 (390)
++|+|+|++.... .....+.+.+.+... +++ .++|.|+|+++++++..+|+.||++++||..|++|+++
T Consensus 244 -----~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~l 317 (396)
T cd03818 244 -----ARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLD-LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSL 317 (396)
T ss_pred -----cEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccC-cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHH
Confidence 9999999753210 001112222222222 222 47899999999999999999999999999999999999
Q ss_pred HhhhhcCCCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHH
Q psy12587 301 IEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLN 378 (390)
Q Consensus 301 ~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (390)
+||||||+|||+|+.++..|++.++.+|+++++ |+++++++|.+++++++ .+.+|++++++.+.++|+|+.++++|.
T Consensus 318 lEAmA~G~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~~-~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 318 LEAMACGCLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDPA-RRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred HHHHHCCCCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 999999999999999999999999999999998 99999999999999998 999999999999988899999999886
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-42 Score=310.44 Aligned_cols=279 Identities=22% Similarity=0.274 Sum_probs=232.8
Q ss_pred Hhh-cCCCEEEEcccccchhHH---HhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHH
Q psy12587 72 WYS-EKPDLVFCDLVSICIPIL---QAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTK 147 (390)
Q Consensus 72 ~~~-~~~Dvi~~~~~~~~~~~~---~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~ 147 (390)
+++ .+||+||+|....+..+. +..++|+|+++|+.+...........+ ......+++.+++.+|.++++|+.++
T Consensus 77 ~~~~~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~ 154 (367)
T cd05844 77 LLRRHRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALLLRSR--WALYARRRRRLARRAALFIAVSQFIR 154 (367)
T ss_pred HHHhhCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhhcccc--hhHHHHHHHHHHHhcCEEEECCHHHH
Confidence 455 999999999755444433 334499999999754322211111111 22234566778899999999999999
Q ss_pred HHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhccccc
Q psy12587 148 SVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEM 227 (390)
Q Consensus 148 ~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~ 227 (390)
+.+.+. +.+..++.++|||+|.+.+.+.. ...++..++++|++.+.||++.+++|+..+.++.++
T Consensus 155 ~~~~~~--~~~~~~i~vi~~g~d~~~~~~~~-----------~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~-- 219 (367)
T cd05844 155 DRLLAL--GFPPEKVHVHPIGVDTAKFTPAT-----------PARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPE-- 219 (367)
T ss_pred HHHHHc--CCCHHHeEEecCCCCHHhcCCCC-----------CCCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCC--
Confidence 998875 44467899999999987765432 223567899999999999999999999999888775
Q ss_pred ccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCC------CCCCCccHH
Q psy12587 228 KTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPS------NEHFGIVPI 301 (390)
Q Consensus 228 ~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~------~e~~~~~~~ 301 (390)
++|+++|.++.. +++++.++++++.++|.|+|+++++++..+|+.||++++||. .|++|++++
T Consensus 220 ---~~l~ivG~g~~~--------~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~ 288 (367)
T cd05844 220 ---VRLVIIGDGPLL--------AALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLL 288 (367)
T ss_pred ---eEEEEEeCchHH--------HHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHH
Confidence 999999987643 788999999998899999999999999999999999999986 589999999
Q ss_pred hhhhcCCCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHH
Q psy12587 302 EAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNT 379 (390)
Q Consensus 302 Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
|||+||+|||+++.++..|++.++.+|+++++ |+++++++|.+++++++ .+.+++.++++.+.++|+|+..++++.+
T Consensus 289 EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 289 EAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLADPD-LRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred HHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 99999999999999999999999999999988 99999999999999998 9999999999999899999999998875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-42 Score=316.38 Aligned_cols=362 Identities=19% Similarity=0.181 Sum_probs=259.4
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCcccc------------------------------ccCCCcceEEeccc--ccc
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHCFKE------------------------------TKDGTLPVKVIGDW--LPR 48 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~~~~------------------------------~~~~~~~i~~~~~~--~~~ 48 (390)
+||...++..| ++|+++||+|.++.+.+.. ....++.+..+... ..+
T Consensus 16 ~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~~~~r 95 (473)
T TIGR02095 16 TGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVEGVPVYFIDNPSLFDR 95 (473)
T ss_pred cCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEECCceEEEEECHHHcCC
Confidence 79999999999 9999999999888221111 11123444444221 111
Q ss_pred c--cch--hhHHHHHHHHHHHHHHHHHHh-h-cCCCEEEEcccccchhHHHh---hc---ccEEEEeecCCccccchhhh
Q psy12587 49 N--IFG--KFYALCMYLRMIVIALYVAWY-S-EKPDLVFCDLVSICIPILQA---KQ---FKVLFYCHYPDQLLSKQGSF 116 (390)
Q Consensus 49 ~--~~~--~~~~~~~~~~~~~~~~~~~~~-~-~~~Dvi~~~~~~~~~~~~~~---~~---~~~v~~~h~~~~~~~~~~~~ 116 (390)
. .++ ......++..+. ......+. . .+|||||+|.+.+++....+ .+ +|+|+++|+...........
T Consensus 96 ~~~~y~~~~~d~~~r~~~f~-~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~ 174 (473)
T TIGR02095 96 PGGIYGDDYPDNAERFAFFS-RAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADD 174 (473)
T ss_pred CCCCCCCCCCCHHHHHHHHH-HHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHH
Confidence 0 111 111222222111 11111122 2 79999999998766543322 22 89999999865321111111
Q ss_pred hhh------hcc-cc-----hhhHHHHHhcCcceEEEccHhHHHHHHHHhcc--------CCCCceeecCCCCCCCCCCC
Q psy12587 117 LKS------IYR-FP-----LNKLEEWTTCKADKIVVNSEFTKSVVQATFRS--------LDHKCLDILYPSVYTEGLEK 176 (390)
Q Consensus 117 ~~~------~~~-~~-----~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~--------~~~~~~~vi~~~~~~~~~~~ 176 (390)
... .+. .. .-.+.+..++.||.++++|+..++.+.....+ .+..++.+|+||+|.+.+.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p 254 (473)
T TIGR02095 175 FSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNP 254 (473)
T ss_pred HHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCC
Confidence 110 000 00 11235677899999999999999887652111 12468999999999998875
Q ss_pred CCc-------------------cchhhhcCCCCC-CCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEE
Q psy12587 177 TTP-------------------EPIENVLNPLPG-KEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVA 236 (390)
Q Consensus 177 ~~~-------------------~~~~~~~~~l~~-~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~ 236 (390)
... ..+++.++ ++. .+.++|+++||+.+.||++.+++|+..+.+. +++|+|+
T Consensus 255 ~~~~~~~~~~~~~~~~~k~~~k~~l~~~~g-l~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~-------~~~lvi~ 326 (473)
T TIGR02095 255 ATDPYLKANYSADDLAGKAENKEALQEELG-LPVDDDVPLFGVISRLTQQKGVDLLLAALPELLEL-------GGQLVVL 326 (473)
T ss_pred CCCcccccCcCccchhhhhhhHHHHHHHcC-CCccCCCCEEEEEecCccccChHHHHHHHHHHHHc-------CcEEEEE
Confidence 422 12344444 332 3678999999999999999999999999764 3899999
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCC
Q psy12587 237 GGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSG 316 (390)
Q Consensus 237 G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~ 316 (390)
|+|+. .+.+++++++++++ .++.+.+..+++++..+|+.||++++||.+|++|++++|||+||+|||+++.+
T Consensus 327 G~g~~------~~~~~l~~~~~~~~--~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~g 398 (473)
T TIGR02095 327 GTGDP------ELEEALRELAERYP--GNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTG 398 (473)
T ss_pred CCCCH------HHHHHHHHHHHHCC--CcEEEEEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCC
Confidence 99853 34477888887764 67888888888888899999999999999999999999999999999999999
Q ss_pred CcccceecC------cceeeecC-CHHHHHHHHHHHhc----CChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhh
Q psy12587 317 GPKESVVDG------RTGFLCES-NEEAFAKAMKKIVD----NDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNM 384 (390)
Q Consensus 317 ~~~e~i~~~------~~g~~~~~-~~~~l~~~i~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (390)
|..|++.++ .+|+++++ |+++++++|.++++ +++ .++++++++. .+.|||+.+++++.++|+++
T Consensus 399 g~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~-~~~~~~~~~~---~~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 399 GLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPS-LWEALQKNAM---SQDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred CccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHH-HHHHHHHHHh---ccCCCcHHHHHHHHHHHHhC
Confidence 999999988 89999999 99999999999887 777 8888988775 36899999999999999864
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=311.21 Aligned_cols=292 Identities=16% Similarity=0.161 Sum_probs=224.1
Q ss_pred cCCCEEEEcccccchhHHHhh-----cccEEEEeecCCccccchhhhh------hhhcc----cc--hhhHHHHHhcCcc
Q psy12587 75 EKPDLVFCDLVSICIPILQAK-----QFKVLFYCHYPDQLLSKQGSFL------KSIYR----FP--LNKLEEWTTCKAD 137 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~~~~-----~~~~v~~~h~~~~~~~~~~~~~------~~~~~----~~--~~~~~~~~~~~ad 137 (390)
.+|||||+|+|.+++....+. ++|+|+|+|+............ ...+. .. ...+.+..++.||
T Consensus 132 ~~pDIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad 211 (485)
T PRK14099 132 FVPDIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLAD 211 (485)
T ss_pred CCCCEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcC
Confidence 799999999987766443222 2799999998643221111000 00000 00 0124677899999
Q ss_pred eEEEccHhHHHHHHHHhcc--------CCCCceeecCCCCCCCCCCCCCc-------------------cchhhhcCCCC
Q psy12587 138 KIVVNSEFTKSVVQATFRS--------LDHKCLDILYPSVYTEGLEKTTP-------------------EPIENVLNPLP 190 (390)
Q Consensus 138 ~ii~~s~~~~~~~~~~~~~--------~~~~~~~vi~~~~~~~~~~~~~~-------------------~~~~~~~~~l~ 190 (390)
.|+++|+..++.+.+.+.+ .+.+++.+|+||+|.+.|.+... ..+++.++ ++
T Consensus 212 ~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~g-l~ 290 (485)
T PRK14099 212 RITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFG-LD 290 (485)
T ss_pred eeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcC-CC
Confidence 9999999999998764221 12578999999999998876432 22344444 33
Q ss_pred C-CCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcE-EE
Q psy12587 191 G-KEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNV-LF 268 (390)
Q Consensus 191 ~-~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v-~~ 268 (390)
. .+.++|+++||+.+.||++.+++|+..+.+. +++|+|+|+|+. .+.+++++++++++ +++ .+
T Consensus 291 ~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~-------~~~lvivG~G~~------~~~~~l~~l~~~~~--~~v~~~ 355 (485)
T PRK14099 291 PDPDALLLGVISRLSWQKGLDLLLEALPTLLGE-------GAQLALLGSGDA------ELEARFRAAAQAYP--GQIGVV 355 (485)
T ss_pred cccCCcEEEEEecCCccccHHHHHHHHHHHHhc-------CcEEEEEecCCH------HHHHHHHHHHHHCC--CCEEEE
Confidence 3 2567889999999999999999999998754 389999999863 34477888887764 445 68
Q ss_pred ecCCChHHHHHHH-HhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceecC---------cceeeecC-CHHH
Q psy12587 269 LTSPSDAAKISLF-KFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDG---------RTGFLCES-NEEA 337 (390)
Q Consensus 269 ~g~~~~~e~~~~~-~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~---------~~g~~~~~-~~~~ 337 (390)
+|+ ++++..+| +.||++++||.+|+||++.+|||+||+|+|++++||.+|.+.++ .+|+++++ |+++
T Consensus 356 ~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~ 433 (485)
T PRK14099 356 IGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADA 433 (485)
T ss_pred eCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCCHHH
Confidence 897 56778877 57999999999999999999999999999999999999998775 58999999 9999
Q ss_pred HHHHHHH---HhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhhhc
Q psy12587 338 FAKAMKK---IVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKK 388 (390)
Q Consensus 338 l~~~i~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (390)
++++|.+ ++++++ .+++++++++ .++|||+..++++.++|+++++++
T Consensus 434 La~ai~~a~~l~~d~~-~~~~l~~~~~---~~~fSw~~~a~~y~~lY~~l~~~~ 483 (485)
T PRK14099 434 LAAALRKTAALFADPV-AWRRLQRNGM---TTDVSWRNPAQHYAALYRSLVAER 483 (485)
T ss_pred HHHHHHHHHHHhcCHH-HHHHHHHHhh---hhcCChHHHHHHHHHHHHHHHhhh
Confidence 9999997 677887 8999998886 378999999999999999998754
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-41 Score=313.91 Aligned_cols=373 Identities=18% Similarity=0.206 Sum_probs=258.2
Q ss_pred CCcchhhhHhh-Hhh--------hhcCCc----eeecCCccc-----------ccc--CCCcceEEeccccccc-----c
Q psy12587 2 LGATARLTITA-TAW--------GATGPR----TTAHDHCFK-----------ETK--DGTLPVKVIGDWLPRN-----I 50 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L--------~~~G~~----V~~~~~~~~-----------~~~--~~~~~i~~~~~~~~~~-----~ 50 (390)
+||.-.++.++ ++| +++||+ |++++.... +.. ..++.|.+++. .+.. .
T Consensus 278 tGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~~~~~~~~~I~rvp~-g~~~~~~~~~ 356 (784)
T TIGR02470 278 TGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGTTCNQRLEKVYGTEHAWILRVPF-RTENGIILRN 356 (784)
T ss_pred CCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccccccccccccccCCCceEEEEecC-CCCccccccc
Confidence 59999999999 874 689994 557621111 111 13444544431 1111 1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhh---cCCCEEEEcccccchhHHHhh---cccEEEEeecCCccccchhhhhhh----h
Q psy12587 51 FGKFYALCMYLRMIVIALYVAWYS---EKPDLVFCDLVSICIPILQAK---QFKVLFYCHYPDQLLSKQGSFLKS----I 120 (390)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~Dvi~~~~~~~~~~~~~~~---~~~~v~~~h~~~~~~~~~~~~~~~----~ 120 (390)
+-.-..++.++..+.......+.. .+||+||+|.+..++.+..++ ++|.+.+.|+.............. .
T Consensus 357 ~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~ 436 (784)
T TIGR02470 357 WISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDK 436 (784)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhcCCCEEEECCcchhhcccccccccccchhH
Confidence 112233445555444444433332 579999999988766555444 499999999763321111110000 0
Q ss_pred cccchh-hHHHHHhcCcceEEEccHhHHHH----HHH-----------Hhc---cC--CCCceeecCCCCCCCCCCCCCc
Q psy12587 121 YRFPLN-KLEEWTTCKADKIVVNSEFTKSV----VQA-----------TFR---SL--DHKCLDILYPSVYTEGLEKTTP 179 (390)
Q Consensus 121 ~~~~~~-~~~~~~~~~ad~ii~~s~~~~~~----~~~-----------~~~---~~--~~~~~~vi~~~~~~~~~~~~~~ 179 (390)
++...+ ..+..+++.||.||+.|...... +.+ .|+ ++ +..++.++|+|+|.+.|.+...
T Consensus 437 ~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~ 516 (784)
T TIGR02470 437 YHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSD 516 (784)
T ss_pred HHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCc
Confidence 010001 11457788999999999754331 111 111 11 2468999999999987766433
Q ss_pred cch-------------------hhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCC
Q psy12587 180 EPI-------------------ENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYD 240 (390)
Q Consensus 180 ~~~-------------------~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~ 240 (390)
... ++.++-+...++++|+++||+.+.||++.+++|+.++....+ ++.|+|+|++.
T Consensus 517 ~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~-----~~~LVIVGGg~ 591 (784)
T TIGR02470 517 KEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE-----LVNLVVVAGKL 591 (784)
T ss_pred hhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC-----CeEEEEEeCCc
Confidence 111 123331223466789999999999999999999988765433 38999999875
Q ss_pred CC----CcchhHHHHHHHHHHHHcCCCCcEEEecCC-ChHHHHHHHH----hcceEEeCCCCCCCCccHHhhhhcCCCEE
Q psy12587 241 PH----NIENVEYYKELGVLVKKLKLSDNVLFLTSP-SDAAKISLFK----FCHCIIYTPSNEHFGIVPIEAMFCKRPVI 311 (390)
Q Consensus 241 ~~----~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~-~~~e~~~~~~----~adv~v~ps~~e~~~~~~~Ea~a~G~pvi 311 (390)
.. ..+...+..++.++++++++.++|.|+|.. +..+..++|+ .+|++++||.+|+||++++|||+||+|||
T Consensus 592 ~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVV 671 (784)
T TIGR02470 592 DAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTF 671 (784)
T ss_pred ccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEE
Confidence 31 122334667889999999999999999975 4444455554 35799999999999999999999999999
Q ss_pred EecCCCcccceecCcceeeecC-CHHHHHHHHHHHh----cCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHH
Q psy12587 312 AVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIV----DNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIV 381 (390)
Q Consensus 312 ~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
+|+.||..|++.++.+|+++++ |+++++++|.+++ +|++ .++++++++++.+.++|||+.+++++.++.
T Consensus 672 AT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~-~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 672 ATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPS-YWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred EcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999999999999999 9999999999876 5787 999999999999989999999999998875
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-41 Score=306.48 Aligned_cols=352 Identities=12% Similarity=0.085 Sum_probs=246.7
Q ss_pred CcchhhhHhh-HhhhhcCCceeec--CCcc--cc-ccCCCcceEEeccccccccchhhHHHHHHHHHHH---HHHHHHHh
Q psy12587 3 GATARLTITA-TAWGATGPRTTAH--DHCF--KE-TKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIV---IALYVAWY 73 (390)
Q Consensus 3 GG~~~~~~~l-~~L~~~G~~V~~~--~~~~--~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 73 (390)
+|.+.++.++ ++|+++||+|+++ .... .+ ....++.+..+.. +.........+..+..... ......++
T Consensus 14 ~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 91 (415)
T cd03816 14 IGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDEILSNPNITIHPLPP--PPQRLNKLPFLLFAPLKVLWQFFSLLWLLY 91 (415)
T ss_pred cCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHHHhcCCCEEEEECCC--CccccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 5677777889 9999999999998 1111 12 2334455555432 1101111122222221111 11111234
Q ss_pred h-cCCCEEEEcccccc------hhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhH
Q psy12587 74 S-EKPDLVFCDLVSIC------IPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFT 146 (390)
Q Consensus 74 ~-~~~Dvi~~~~~~~~------~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~ 146 (390)
+ .+||+||+|.++.. ..+.+..+.|+|+++|+..................+..++++++++.||.++++|+.+
T Consensus 92 ~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~ 171 (415)
T cd03816 92 KLRPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILALKLGENHPLVRLAKWYEKLFGRLADYNLCVTKAM 171 (415)
T ss_pred hcCCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhcccCCCCHHHHHHHHHHHHHhhcCCEeeecCHHH
Confidence 5 78999999874421 1123334599999999753211100101112223456788899999999999999999
Q ss_pred HHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhc--------------C--CCCCCCCeEEEEeecccccCCHH
Q psy12587 147 KSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVL--------------N--PLPGKEDIVFLSINRYERKKNLE 210 (390)
Q Consensus 147 ~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~--------------~--~l~~~~~~~i~~~g~~~~~K~~~ 210 (390)
++.+.+ ++ .+.+++.+||||. ...|.+.......... + .+..++..+++++||+.+.||++
T Consensus 172 ~~~l~~-~~-~~~~ki~vI~Ng~-~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~ 248 (415)
T cd03816 172 KEDLQQ-FN-NWKIRATVLYDRP-PEQFRPLPLEEKHELFLKLAKTFLTRELRIGAVQLSEERPALLVSSTSWTPDEDFG 248 (415)
T ss_pred HHHHHh-hh-ccCCCeeecCCCC-HHHceeCcHHHHHHHHHhccccccccccccccceecCCCceEEEEeccccCCCCHH
Confidence 999987 43 4478999999994 3444443221111100 0 01233557788999999999999
Q ss_pred HHHHHHHHHHhh------cccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhc
Q psy12587 211 LAIYSLNSLRSR------LSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFC 284 (390)
Q Consensus 211 ~ll~a~~~l~~~------~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~a 284 (390)
.+++|++.+.+. .| +++|+|+|+|+.. ++++++++++++++.+.+.|+++.+++.++|+.|
T Consensus 249 ~li~A~~~l~~~~~~~~~~~-----~i~l~ivG~G~~~--------~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~a 315 (415)
T cd03816 249 ILLDALVAYEKSAATGPKLP-----KLLCIITGKGPLK--------EKYLERIKELKLKKVTIRTPWLSAEDYPKLLASA 315 (415)
T ss_pred HHHHHHHHHHHhhcccccCC-----CEEEEEEecCccH--------HHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhC
Confidence 999999998753 24 4999999999875 8999999999986545556789999999999999
Q ss_pred ceEEeCCC---CCCCCccHHhhhhcCCCEEEecCCCcccceecCcceeeecCCHHHHHHHHHHHhcC---ChhHHHHHHH
Q psy12587 285 HCIIYTPS---NEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDN---DGNIIQQFSQ 358 (390)
Q Consensus 285 dv~v~ps~---~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~---~~~~~~~~~~ 358 (390)
|++++|+. .+++|++++||||||+|||+++.++..|+++++.+|++++ |+++++++|.++++| ++ .+++|++
T Consensus 316 Dv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~-d~~~la~~i~~ll~~~~~~~-~~~~m~~ 393 (415)
T cd03816 316 DLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG-DSEELAEQLIDLLSNFPNRG-KLNSLKK 393 (415)
T ss_pred CEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC-CHHHHHHHHHHHHhcCCCHH-HHHHHHH
Confidence 99987532 4789999999999999999999999999999999999997 999999999999999 67 8999999
Q ss_pred HHHHHHhhhcCHHHHHHH
Q psy12587 359 FGFNRFNEKFSFQAFSIQ 376 (390)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~ 376 (390)
++++.. .++|+....+
T Consensus 394 ~~~~~~--~~~~~~~~~~ 409 (415)
T cd03816 394 GAQEES--ELRWDENWDR 409 (415)
T ss_pred HHHHhh--hcCHHHHHHH
Confidence 999886 5566654433
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-41 Score=301.53 Aligned_cols=330 Identities=21% Similarity=0.239 Sum_probs=249.6
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecC--C-ccccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cC
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHD--H-CFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EK 76 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~--~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (390)
.||+++++.++ ++|.++||+|+++. . ........++.+..+... .... +..+. .... ...+++ .+
T Consensus 9 ~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~-~~~~-----l~~~~~~~~ 78 (355)
T cd03819 9 SGGVERGTLELARALVERGHRSLVASAGGRLVAELEAEGSRHIKLPFI-SKNP---LRILL-NVAR-----LRRLIREEK 78 (355)
T ss_pred cCcHHHHHHHHHHHHHHcCCEEEEEcCCCchHHHHHhcCCeEEEcccc-ccch---hhhHH-HHHH-----HHHHHHHcC
Confidence 49999999999 99999999998882 1 112222334444433211 1111 11111 1111 112344 99
Q ss_pred CCEEEEcccccchhH---HHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHH
Q psy12587 77 PDLVFCDLVSICIPI---LQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQAT 153 (390)
Q Consensus 77 ~Dvi~~~~~~~~~~~---~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 153 (390)
||+||+|+....+.. .+..++|+++++|+...... ....+++++|.++++|+...+.+.+.
T Consensus 79 ~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~----------------~~~~~~~~~~~vi~~s~~~~~~~~~~ 142 (355)
T cd03819 79 VDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF----------------RYNAIMARGDRVIAVSNFIADHIREN 142 (355)
T ss_pred CCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH----------------HHHHHHHhcCEEEEeCHHHHHHHHHh
Confidence 999999985433322 23345999999997532110 23445678999999999999999876
Q ss_pred hccCCCCceeecCCCCCCCCCCCCCccc-----hhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccc
Q psy12587 154 FRSLDHKCLDILYPSVYTEGLEKTTPEP-----IENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMK 228 (390)
Q Consensus 154 ~~~~~~~~~~vi~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~ 228 (390)
++ .+.+++.++|||+|...+.+..... .++.++ ..++.++++++||+.+.||++.+++++..+++..++
T Consensus 143 ~~-~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~--- 216 (355)
T cd03819 143 YG-VDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWP--LPKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPD--- 216 (355)
T ss_pred cC-CChhhEEEecCCccccccCccccchHHHHHHHHHcC--CCCCceEEEEeeccccccCHHHHHHHHHHHHhcCCC---
Confidence 65 4467899999999988776543211 222222 234678899999999999999999999999887664
Q ss_pred cceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCC-CCCCCCccHHhhhhcC
Q psy12587 229 THVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTP-SNEHFGIVPIEAMFCK 307 (390)
Q Consensus 229 ~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps-~~e~~~~~~~Ea~a~G 307 (390)
++++++|.++.. ..+...+.+.++++++.++|.++|+ .+++.++|+.||++++|| ..|++|++++|||+||
T Consensus 217 --~~l~ivG~~~~~----~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G 288 (355)
T cd03819 217 --VHLLIVGDAQGR----RFYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMG 288 (355)
T ss_pred --eEEEEEECCccc----chHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcC
Confidence 999999988653 2445667778888888889999999 556789999999999999 7899999999999999
Q ss_pred CCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhc-CChhHHHHHHHHHHHHHhhhcCHHH
Q psy12587 308 RPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVD-NDGNIIQQFSQFGFNRFNEKFSFQA 372 (390)
Q Consensus 308 ~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (390)
+|||+++.++..|++.++.+|+++++ |+++++++|..++. +++ .+.++++++++.+.++|+|+.
T Consensus 289 ~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~-~~~~~~~~a~~~~~~~f~~~~ 354 (355)
T cd03819 289 RPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPE-GRAKMFAKARMCVETLFSYDR 354 (355)
T ss_pred CCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHH-HHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999989999988 99999999976655 666 999999999999999999985
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=310.05 Aligned_cols=361 Identities=16% Similarity=0.162 Sum_probs=255.5
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCcccc------------------------------ccCCCcceEEeccccc--c
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHCFKE------------------------------TKDGTLPVKVIGDWLP--R 48 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~~~~------------------------------~~~~~~~i~~~~~~~~--~ 48 (390)
+||.+.++..| ++|+++||+|+++.+.+.. ...+++.+..+..... +
T Consensus 15 ~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~ 94 (476)
T cd03791 15 TGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDGVPVYFLDNPDYFDR 94 (476)
T ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCCceEEEEcChHHcCC
Confidence 79999999999 9999999999988211111 1123455555432111 1
Q ss_pred c------cchhhHHHHHHHHHHHHHHHHHHhh--cCCCEEEEcccccchhHHH---h------hcccEEEEeecCCcccc
Q psy12587 49 N------IFGKFYALCMYLRMIVIALYVAWYS--EKPDLVFCDLVSICIPILQ---A------KQFKVLFYCHYPDQLLS 111 (390)
Q Consensus 49 ~------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Dvi~~~~~~~~~~~~~---~------~~~~~v~~~h~~~~~~~ 111 (390)
. .........++..+... ....+.+ .+|||||+|++.+++.... . .++|+|+++|+......
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~f~~~-~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~ 173 (476)
T cd03791 95 PGLYDDSGYDYEDNAERFALFSRA-ALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGV 173 (476)
T ss_pred CCCCCccCCCCccHHHHHHHHHHH-HHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCC
Confidence 0 01111111222211111 1111222 7999999999876553322 1 25899999998654321
Q ss_pred chhhhhhhh-------------cccchhhHHHHHhcCcceEEEccHhHHHHHHHH--------hccCCCCceeecCCCCC
Q psy12587 112 KQGSFLKSI-------------YRFPLNKLEEWTTCKADKIVVNSEFTKSVVQAT--------FRSLDHKCLDILYPSVY 170 (390)
Q Consensus 112 ~~~~~~~~~-------------~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~--------~~~~~~~~~~vi~~~~~ 170 (390)
......... .......+++..+..||.++++|+..++.+.+. +...+..++.+|+||+|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid 253 (476)
T cd03791 174 FPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGID 253 (476)
T ss_pred CCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCc
Confidence 111100000 000112466788999999999999999888641 11122579999999999
Q ss_pred CCCCCCCCccc-------------------hhhhcCCCC-CCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccc
Q psy12587 171 TEGLEKTTPEP-------------------IENVLNPLP-GKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTH 230 (390)
Q Consensus 171 ~~~~~~~~~~~-------------------~~~~~~~l~-~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~ 230 (390)
.+.+.+..... +++.++ ++ ..+.++|+++||+.+.||++.+++++..+.++ +
T Consensus 254 ~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g-~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~-------~ 325 (476)
T cd03791 254 YDVWNPATDPHLPANYSADDLEGKAENKAALQEELG-LPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL-------G 325 (476)
T ss_pred CcccCccccchhhhcCCccccccHHHHHHHHHHHcC-CCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc-------C
Confidence 98887653321 334443 22 34778899999999999999999999998865 3
Q ss_pred eEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCE
Q psy12587 231 VKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPV 310 (390)
Q Consensus 231 ~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pv 310 (390)
++|+++|.|+. .+.+.++++++++ .+++.+.+..+++++..+|+.||++++||.+|++|++++|||+||+||
T Consensus 326 ~~lvi~G~g~~------~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pv 397 (476)
T cd03791 326 GQLVILGSGDP------EYEEALRELAARY--PGRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVP 397 (476)
T ss_pred cEEEEEecCCH------HHHHHHHHHHHhC--CCcEEEEEeCCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCC
Confidence 89999999853 3446677777765 467887766677777899999999999999999999999999999999
Q ss_pred EEecCCCcccceecCc------ceeeecC-CHHHHHHHHHHHhc---CChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHH
Q psy12587 311 IAVNSGGPKESVVDGR------TGFLCES-NEEAFAKAMKKIVD---NDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTI 380 (390)
Q Consensus 311 i~~~~~~~~e~i~~~~------~g~~~~~-~~~~l~~~i~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
|+++.||..|++.++. +|+++++ |+++++++|.++++ +++ .+.++++++. .+.|||+.+++++.++
T Consensus 398 I~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~-~~~~~~~~~~---~~~fsw~~~a~~~~~~ 473 (476)
T cd03791 398 IVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPE-AWRKLQRNAM---AQDFSWDRSAKEYLEL 473 (476)
T ss_pred EECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHH-HHHHHHHHHh---ccCCChHHHHHHHHHH
Confidence 9999999999999987 9999999 99999999999875 445 6667766654 3579999999999999
Q ss_pred HHh
Q psy12587 381 VNN 383 (390)
Q Consensus 381 ~~~ 383 (390)
|++
T Consensus 474 y~~ 476 (476)
T cd03791 474 YRS 476 (476)
T ss_pred HhC
Confidence 863
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=304.76 Aligned_cols=292 Identities=17% Similarity=0.172 Sum_probs=225.1
Q ss_pred cCCCEEEEcccccchhHHHh----------hcccEEEEeecCCccccchhhhhh-----hhcccc-----hhhHHHHHhc
Q psy12587 75 EKPDLVFCDLVSICIPILQA----------KQFKVLFYCHYPDQLLSKQGSFLK-----SIYRFP-----LNKLEEWTTC 134 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~~~----------~~~~~v~~~h~~~~~~~~~~~~~~-----~~~~~~-----~~~~~~~~~~ 134 (390)
.+|||||+|+|.+++....+ .++|+|+|+|+............. ...... ...+.+..+.
T Consensus 140 ~~pDiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~ 219 (489)
T PRK14098 140 WKPDIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVE 219 (489)
T ss_pred CCCCEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHH
Confidence 58999999998766543322 148999999986432111000000 000000 1234567789
Q ss_pred CcceEEEccHhHHHHHHHH--hc-cC------CCCceeecCCCCCCCCCCCCCccc-------------------hhhhc
Q psy12587 135 KADKIVVNSEFTKSVVQAT--FR-SL------DHKCLDILYPSVYTEGLEKTTPEP-------------------IENVL 186 (390)
Q Consensus 135 ~ad~ii~~s~~~~~~~~~~--~~-~~------~~~~~~vi~~~~~~~~~~~~~~~~-------------------~~~~~ 186 (390)
.||.|+++|+..++.+.+. ++ ++ ...++.+|+||+|.+.+.+..... +++.+
T Consensus 220 ~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~l 299 (489)
T PRK14098 220 HADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEV 299 (489)
T ss_pred hcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHHHHh
Confidence 9999999999999988752 11 11 157899999999999887654321 22333
Q ss_pred CCCC-CCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCc
Q psy12587 187 NPLP-GKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDN 265 (390)
Q Consensus 187 ~~l~-~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~ 265 (390)
+ ++ ..+.++|+++||+.+.||++.+++|+..+.+. +++|+|+|+|+. .|.++++++++++ +++
T Consensus 300 g-l~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~-------~~~lvivG~G~~------~~~~~l~~l~~~~--~~~ 363 (489)
T PRK14098 300 G-LPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL-------DIQLVICGSGDK------EYEKRFQDFAEEH--PEQ 363 (489)
T ss_pred C-CCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc-------CcEEEEEeCCCH------HHHHHHHHHHHHC--CCC
Confidence 3 33 23567899999999999999999999998764 499999998864 3457888888887 478
Q ss_pred EEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceec----CcceeeecC-CHHHHHH
Q psy12587 266 VLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVD----GRTGFLCES-NEEAFAK 340 (390)
Q Consensus 266 v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~----~~~g~~~~~-~~~~l~~ 340 (390)
|.+.|.++++++..+|+.||++++||..|++|++.+|||+||+|+|+++.||..|.+.+ +.+|+++++ |++++++
T Consensus 364 V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ 443 (489)
T PRK14098 364 VSVQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVA 443 (489)
T ss_pred EEEEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998864 679999999 9999999
Q ss_pred HHHHHh---cCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhh
Q psy12587 341 AMKKIV---DNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLD 386 (390)
Q Consensus 341 ~i~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (390)
+|.+++ ++++ .++++++++ ..+.|||+..++++.++|+++++
T Consensus 444 ai~~~l~~~~~~~-~~~~~~~~~---~~~~fsw~~~a~~y~~lY~~~~~ 488 (489)
T PRK14098 444 KLGEALALYHDEE-RWEELVLEA---MERDFSWKNSAEEYAQLYRELLG 488 (489)
T ss_pred HHHHHHHHHcCHH-HHHHHHHHH---hcCCCChHHHHHHHHHHHHHHhc
Confidence 999865 5666 777776655 34789999999999999998864
|
|
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-40 Score=298.09 Aligned_cols=339 Identities=17% Similarity=0.156 Sum_probs=245.9
Q ss_pred CCcchhhhHhh-HhhhhcCCceeec--CC-ccc-cccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-c
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAH--DH-CFK-ETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-E 75 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~--~~-~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 75 (390)
.||+++++.++ ++|.++||+|+++ +. ... .....++.+..++.... .........+.. .+. .+.+ .
T Consensus 14 ~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~~~---~~~-~~~~~~ 85 (363)
T cd04955 14 YGGFETFVEELAPRLVARGHEVTVYCRSPYPKQKETEYNGVRLIHIPAPEI----GGLGTIIYDILA---ILH-ALFVKR 85 (363)
T ss_pred cCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCcccccCCceEEEcCCCCc----cchhhhHHHHHH---HHH-HHhccC
Confidence 59999999999 9999999999988 11 111 22334555555432110 111111111111 111 1112 5
Q ss_pred CCCEEEEcccccch--hHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHH
Q psy12587 76 KPDLVFCDLVSICI--PILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQAT 153 (390)
Q Consensus 76 ~~Dvi~~~~~~~~~--~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 153 (390)
++|+||...+.... ...+..+.|++++.|+....... .....+.+..+.++..++.+|.++++|+..++.+.+.
T Consensus 86 ~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~----~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 161 (363)
T cd04955 86 DIDHVHALGPAIAPFLPLLRLKGKKVVVNMDGLEWKRAK----WGRPAKRYLKFGEKLAVKFADRLIADSPGIKEYLKEK 161 (363)
T ss_pred CeEEEEecCccHHHHHHHHHhcCCCEEEEccCcceeecc----cccchhHHHHHHHHHHHhhccEEEeCCHHHHHHHHHh
Confidence 66666665544322 22233359999999975432111 1112233455677888999999999999999999877
Q ss_pred hccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEE
Q psy12587 154 FRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKL 233 (390)
Q Consensus 154 ~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l 233 (390)
++. .. .++|||+|...+.+ ........+ . .+...++++|++.+.||++.+++|++++.. + ++|
T Consensus 162 ~~~---~~-~~i~ngv~~~~~~~--~~~~~~~~~--~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~---~-----~~l 224 (363)
T cd04955 162 YGR---DS-TYIPYGADHVVSSE--EDEILKKYG--L-EPGRYYLLVGRIVPENNIDDLIEAFSKSNS---G-----KKL 224 (363)
T ss_pred cCC---CC-eeeCCCcChhhcch--hhhhHHhcC--C-CCCcEEEEEecccccCCHHHHHHHHHhhcc---C-----ceE
Confidence 662 23 99999999876553 111222221 1 233457899999999999999999998865 2 899
Q ss_pred EEEcCCCCCCcchhHHHHHHHHHHH-HcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCC-CCCCccHHhhhhcCCCEE
Q psy12587 234 VVAGGYDPHNIENVEYYKELGVLVK-KLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSN-EHFGIVPIEAMFCKRPVI 311 (390)
Q Consensus 234 ~i~G~~~~~~~~~~~y~~~~~~~~~-~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~-e~~~~~~~Ea~a~G~pvi 311 (390)
+++|+++.. ..+.+.+. .+++.++|.++|+++++++..++++||++++||.. |++|++++|||+||+|||
T Consensus 225 ~ivG~~~~~--------~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~PvI 296 (363)
T cd04955 225 VIVGNADHN--------TPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVL 296 (363)
T ss_pred EEEcCCCCc--------chHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCCCEE
Confidence 999998654 44444444 56778899999999999999999999999999998 999999999999999999
Q ss_pred EecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q psy12587 312 AVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVN 382 (390)
Q Consensus 312 ~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
+|+.++..|++.+ +|.++++ +. ++++|.+++++++ .+.++++++++.+.++|||+.+++++.++|+
T Consensus 297 ~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~~~~~-~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 297 ASDNPFNREVLGD--KAIYFKVGDD--LASLLEELEADPE-EVSAMAKAARERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred EecCCccceeecC--CeeEecCchH--HHHHHHHHHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999999866 7888886 44 9999999999998 8999999999999888999999999999874
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-41 Score=310.60 Aligned_cols=285 Identities=20% Similarity=0.214 Sum_probs=236.0
Q ss_pred cCCCEEEEcccccc-hh---HHHhhcccEEEEeecCCccccc--------hhhhhhhhcccchhhHHHHHhcCcceEEEc
Q psy12587 75 EKPDLVFCDLVSIC-IP---ILQAKQFKVLFYCHYPDQLLSK--------QGSFLKSIYRFPLNKLEEWTTCKADKIVVN 142 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~-~~---~~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~ 142 (390)
.++|+||+|+...+ +. +.+..++|+|++.|+....... .....++.+..++..+++.+++.||.|+++
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii~~ 251 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITTL 251 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEEec
Confidence 68999999985332 22 2233449999999985321100 012233333445567788899999999999
Q ss_pred cHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhh
Q psy12587 143 SEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSR 222 (390)
Q Consensus 143 s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~ 222 (390)
|+..++...+. +.+.+++.+||||+|.+.+.+.... . ...+.++|+++||+.+.||++.+++|++.+.++
T Consensus 252 s~~~~~~~~~~--g~~~~ki~vIpNgid~~~f~~~~~~-----~---~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~ 321 (475)
T cd03813 252 YEGNRERQIED--GADPEKIRVIPNGIDPERFAPARRA-----R---PEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKK 321 (475)
T ss_pred CHHHHHHHHHc--CCCHHHeEEeCCCcCHHHcCCcccc-----c---cCCCCcEEEEEeccccccCHHHHHHHHHHHHHh
Confidence 99998876653 3446799999999999877654321 0 224678999999999999999999999999988
Q ss_pred cccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHh
Q psy12587 223 LSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIE 302 (390)
Q Consensus 223 ~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~E 302 (390)
.|+ ++++|+|+++. +..|.++++++++++++.++|.|+| ..++.++|+.+|++++||..|++|++++|
T Consensus 322 ~p~-----~~l~IvG~g~~----~~~~~~e~~~li~~l~l~~~V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlE 389 (475)
T cd03813 322 IPD-----AEGWVIGPTDE----DPEYAEECRELVESLGLEDNVKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILE 389 (475)
T ss_pred CCC-----eEEEEECCCCc----ChHHHHHHHHHHHHhCCCCeEEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHH
Confidence 875 99999998853 2367789999999999999999999 45678999999999999999999999999
Q ss_pred hhhcCCCEEEecCCCcccceec------CcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHH
Q psy12587 303 AMFCKRPVIAVNSGGPKESVVD------GRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSI 375 (390)
Q Consensus 303 a~a~G~pvi~~~~~~~~e~i~~------~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (390)
||+||+|||+|+.++.+|++.+ |.+|+++++ |+++++++|.++++|++ .++++++++++.+.+.|+|+.+++
T Consensus 390 Ama~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~~~-~~~~~~~~a~~~v~~~~s~~~~~~ 468 (475)
T cd03813 390 AMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLKDPE-LRRAMGEAGRKRVERYYTLERMID 468 (475)
T ss_pred HHHcCCCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHhCCHHHHHH
Confidence 9999999999999999999988 569999999 99999999999999999 999999999999999999999999
Q ss_pred HHHHHHH
Q psy12587 376 QLNTIVN 382 (390)
Q Consensus 376 ~~~~~~~ 382 (390)
++.++|+
T Consensus 469 ~y~~lY~ 475 (475)
T cd03813 469 SYRRLYL 475 (475)
T ss_pred HHHHHhC
Confidence 9999884
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-41 Score=301.91 Aligned_cols=350 Identities=17% Similarity=0.126 Sum_probs=242.0
Q ss_pred CCcchhhhHhh-HhhhhcCCceeec-CCccccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cCCC
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAH-DHCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EKPD 78 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~D 78 (390)
.||+++++.++ +.|.+.||+|+++ ...........-.+.............. ....+....... ...... .+||
T Consensus 11 ~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~D 87 (372)
T cd03792 11 GGGVAEILHSLVPLMRDLGVDTRWEVIKGDPEFFNVTKKFHNALQGADIELSEE--EKEIYLEWNEEN-AERPLLDLDAD 87 (372)
T ss_pred CCcHHHHHHHHHHHHHHcCCCceEEecCCChhHHHHHHHhhHhhcCCCCCCCHH--HHHHHHHHHHHH-hccccccCCCC
Confidence 69999999999 9999999999887 1111110000001111000000000010 011111111000 111233 7899
Q ss_pred EEEEcccccchhH-HHhh-cccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHHhcc
Q psy12587 79 LVFCDLVSICIPI-LQAK-QFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRS 156 (390)
Q Consensus 79 vi~~~~~~~~~~~-~~~~-~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~ 156 (390)
+||+|++...... +... ++|+|+++|+...... .. .....+..++++|.+++.|+.. ... .
T Consensus 88 vv~~h~~~~~~~~~~~~~~~~~~i~~~H~~~~~~~------~~-----~~~~~~~~~~~~d~~i~~~~~~---~~~---~ 150 (372)
T cd03792 88 VVVIHDPQPLALPLFKKKRGRPWIWRCHIDLSSPN------RR-----VWDFLQPYIEDYDAAVFHLPEY---VPP---Q 150 (372)
T ss_pred EEEECCCCchhHHHhhhcCCCeEEEEeeeecCCCc------HH-----HHHHHHHHHHhCCEEeecHHHh---cCC---C
Confidence 9999986533222 2222 4899999996432110 11 1122355677899999888322 222 2
Q ss_pred CCCCceeecCCCCCCCCCC--CCC---ccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccce
Q psy12587 157 LDHKCLDILYPSVYTEGLE--KTT---PEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHV 231 (390)
Q Consensus 157 ~~~~~~~vi~~~~~~~~~~--~~~---~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~ 231 (390)
.+..++ ++|||+|..... ... ....++.++ ...+.++|+++||+.+.||++.++++++.+.+..++ +
T Consensus 151 ~~~~~~-vipngvd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~-----~ 222 (372)
T cd03792 151 VPPRKV-IIPPSIDPLSGKNRELSPADIEYILEKYG--IDPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPD-----P 222 (372)
T ss_pred CCCceE-EeCCCCCCCccccCCCCHHHHHHHHHHhC--CCCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCC-----C
Confidence 223455 999999975311 111 123344444 234678899999999999999999999999887665 9
Q ss_pred EEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCC--ChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCC
Q psy12587 232 KLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSP--SDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRP 309 (390)
Q Consensus 232 ~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~--~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~p 309 (390)
+|+++|+++....+. .+.++++.+..++.++|.+.|.. +++++..+|+.||++++||..||||++++|||+||+|
T Consensus 223 ~l~i~G~g~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~P 299 (372)
T cd03792 223 QLVLVGSGATDDPEG---WIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKP 299 (372)
T ss_pred EEEEEeCCCCCCchh---HHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCC
Confidence 999999987532211 13344555456777889999886 8899999999999999999999999999999999999
Q ss_pred EEEecCCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhh
Q psy12587 310 VIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNM 384 (390)
Q Consensus 310 vi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (390)
||+|+.++..+++.++.+|++++ +.++++.+|.+++++++ .+++|++++++.+.++|+|+.+++++.++|+++
T Consensus 300 vv~s~~~~~~~~i~~~~~g~~~~-~~~~~a~~i~~ll~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 372 (372)
T cd03792 300 VIAGPVGGIPLQIEDGETGFLVD-TVEEAAVRILYLLRDPE-LRRKMGANAREHVRENFLITRHLKDYLYLISKL 372 (372)
T ss_pred EEEcCCCCchhhcccCCceEEeC-CcHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 99999999999999999999988 77889999999999988 999999999999888999999999999999863
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=309.91 Aligned_cols=357 Identities=13% Similarity=0.135 Sum_probs=253.4
Q ss_pred CCcchhhhHhh-HhhhhcCC--------------ceeec--C--C---cc-ccccCCCcceEEeccccccc------cch
Q psy12587 2 LGATARLTITA-TAWGATGP--------------RTTAH--D--H---CF-KETKDGTLPVKVIGDWLPRN------IFG 52 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~--------------~V~~~--~--~---~~-~~~~~~~~~i~~~~~~~~~~------~~~ 52 (390)
.||+|+++.+| .+|.+.++ .|.++ . . .+ ......++.+..+....... ...
T Consensus 293 ~GGAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~~~~~~~L~~~Gv~v~~l~~~~~~~~~~~~~~~~ 372 (694)
T PRK15179 293 AGGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGADFFAATLADAGIPVSVYSDMQAWGGCEFSSLLA 372 (694)
T ss_pred CCcHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCcchHHHHHHhCCCeEEEeccCCccCcccccccch
Confidence 69999999999 99999854 35543 1 1 11 12335678888774321110 001
Q ss_pred hhHHHHH----HHHHHHHHHHHHHhh-cCCCEEEEcccccch---hHHHhhcccEEE-EeecCCccccchhhhhhhhccc
Q psy12587 53 KFYALCM----YLRMIVIALYVAWYS-EKPDLVFCDLVSICI---PILQAKQFKVLF-YCHYPDQLLSKQGSFLKSIYRF 123 (390)
Q Consensus 53 ~~~~~~~----~~~~~~~~~~~~~~~-~~~Dvi~~~~~~~~~---~~~~~~~~~~v~-~~h~~~~~~~~~~~~~~~~~~~ 123 (390)
.+..+.. ....... ....+++ .+|||||+|.....+ .+.+..++|+|+ +.|+...... .......+
T Consensus 373 ~~~~~~~~lp~~~~~~~~-~L~~~lk~~kpDIVH~h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~--~~~~~~~~-- 447 (694)
T PRK15179 373 PYREYLRFLPKQIIEGTT-KLTDVMRSSVPSVVHIWQDGSIFACALAALLAGVPRIVLSVRTMPPVDR--PDRYRVEY-- 447 (694)
T ss_pred hhHHHhhhcchhHHHHHH-HHHHHHHHcCCcEEEEeCCcHHHHHHHHHHHcCCCEEEEEeCCCccccc--hhHHHHHH--
Confidence 1111100 0111111 1123566 899999999855432 334445588876 4464322111 11111111
Q ss_pred chhhHHHHH-hcCcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccch-hhhcCCCCCCCCeEEEEee
Q psy12587 124 PLNKLEEWT-TCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPI-ENVLNPLPGKEDIVFLSIN 201 (390)
Q Consensus 124 ~~~~~~~~~-~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~i~~~g 201 (390)
..+...+ ...++.+++.|+..++.+.+.++ .+.+++.|||||+|...+.+.+.... ...+.....++.++|+++|
T Consensus 448 --~~l~~~l~~~~~~i~Vs~S~~~~~~l~~~~g-~~~~kI~VI~NGVd~~~f~~~~~~~~~~~~~~~~~~~~~~vIg~VG 524 (694)
T PRK15179 448 --DIIYSELLKMRGVALSSNSQFAAHRYADWLG-VDERRIPVVYNGLAPLKSVQDDACTAMMAQFDARTSDARFTVGTVM 524 (694)
T ss_pred --HHHHHHHHhcCCeEEEeCcHHHHHHHHHHcC-CChhHEEEECCCcCHHhcCCCchhhHHHHhhccccCCCCeEEEEEE
Confidence 1111111 22456777788888888877654 44679999999999877754321110 1111100223567899999
Q ss_pred cccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHH
Q psy12587 202 RYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLF 281 (390)
Q Consensus 202 ~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~ 281 (390)
|+.+.||++.+++|+..+.++.++ ++|+|+|+|+.. ++++++++++++.++|.|.|+.+ ++..+|
T Consensus 525 RL~~~KG~~~LI~A~a~l~~~~p~-----~~LvIvG~G~~~--------~~L~~l~~~lgL~~~V~flG~~~--dv~~ll 589 (694)
T PRK15179 525 RVDDNKRPFLWVEAAQRFAASHPK-----VRFIMVGGGPLL--------ESVREFAQRLGMGERILFTGLSR--RVGYWL 589 (694)
T ss_pred eCCccCCHHHHHHHHHHHHHHCcC-----eEEEEEccCcch--------HHHHHHHHHcCCCCcEEEcCCcc--hHHHHH
Confidence 999999999999999999888875 999999998765 88999999999999999999976 468999
Q ss_pred HhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceecCcceeeecC-C--HHHHHHHHHHHhcCChhHHHHHHH
Q psy12587 282 KFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-N--EEAFAKAMKKIVDNDGNIIQQFSQ 358 (390)
Q Consensus 282 ~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~--~~~l~~~i~~l~~~~~~~~~~~~~ 358 (390)
+.+|++++||.+|+||++++|||+||+|||+|+.+|.+|++.++.+|+++++ | ++++++++.+++.+.. ....+++
T Consensus 590 ~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~-~~~~l~~ 668 (694)
T PRK15179 590 TQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCA-ADPGIAR 668 (694)
T ss_pred HhcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChh-ccHHHHH
Confidence 9999999999999999999999999999999999999999999999999986 4 5799999999888766 6677888
Q ss_pred HHHHHHhhhcCHHHHHHHHHHHHH
Q psy12587 359 FGFNRFNEKFSFQAFSIQLNTIVN 382 (390)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
++++.+.++|||+.+++++.++|+
T Consensus 669 ~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 669 KAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999889999999999999985
|
|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-40 Score=306.29 Aligned_cols=373 Identities=17% Similarity=0.236 Sum_probs=257.4
Q ss_pred CCcchhhhHh--------h-HhhhhcCCcee----ecCCc---------cc--cccCC--CcceEEecccccc-cc---c
Q psy12587 2 LGATARLTIT--------A-TAWGATGPRTT----AHDHC---------FK--ETKDG--TLPVKVIGDWLPR-NI---F 51 (390)
Q Consensus 2 ~GG~~~~~~~--------l-~~L~~~G~~V~----~~~~~---------~~--~~~~~--~~~i~~~~~~~~~-~~---~ 51 (390)
+||.-.++.+ | ++|+++||+|+ +++.. .+ +...+ +..|.+++ +.+. .. +
T Consensus 302 tGGQ~vYVl~~aral~~el~~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP-~g~~~~~l~~~ 380 (815)
T PLN00142 302 TGGQVVYILDQVRALENEMLLRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVP-FRTEKGILRKW 380 (815)
T ss_pred CCCceehHHHHHHHHHHHHHHHHHhcCCCccceeEEEEeccCCccCCcccCcceeccCCCceEEEecC-CCCCccccccc
Confidence 5788878864 5 67778899864 55111 11 12222 34444432 2221 01 1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhh---cCCCEEEEcccccchhHHHhhc---ccEEEEeecCCccccchhhhh----hhhc
Q psy12587 52 GKFYALCMYLRMIVIALYVAWYS---EKPDLVFCDLVSICIPILQAKQ---FKVLFYCHYPDQLLSKQGSFL----KSIY 121 (390)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~---~~~Dvi~~~~~~~~~~~~~~~~---~~~v~~~h~~~~~~~~~~~~~----~~~~ 121 (390)
-.-..++.++..+.......+.+ .+||+||+|.+..++.+..++. +|.+.+.|............. ...+
T Consensus 381 i~ke~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y 460 (815)
T PLN00142 381 ISRFDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKY 460 (815)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhh
Confidence 12234455555554444433433 5699999999887776655554 999999996542211111110 1111
Q ss_pred ccch-hhHHHHHhcCcceEEEccHhHHHHHH-------HH-----------hccC--CCCceeecCCCCCCCCCCCCCcc
Q psy12587 122 RFPL-NKLEEWTTCKADKIVVNSEFTKSVVQ-------AT-----------FRSL--DHKCLDILYPSVYTEGLEKTTPE 180 (390)
Q Consensus 122 ~~~~-~~~~~~~~~~ad~ii~~s~~~~~~~~-------~~-----------~~~~--~~~~~~vi~~~~~~~~~~~~~~~ 180 (390)
+... -..+..++..||.||+.|......+. .+ ..++ ...++.++|+|+|...|.+....
T Consensus 461 ~~~~r~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~ 540 (815)
T PLN00142 461 HFSCQFTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEK 540 (815)
T ss_pred hhhhchHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChH
Confidence 1111 12467788999999999977664221 11 1111 13488999999999877653321
Q ss_pred c-------------------hhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCC-
Q psy12587 181 P-------------------IENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYD- 240 (390)
Q Consensus 181 ~-------------------~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~- 240 (390)
. .++.++-+...+.++|+++||+.+.||++.+++|+.++.+..+ +++|+|+|++.
T Consensus 541 ~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~-----~~~LVIVGgg~d 615 (815)
T PLN00142 541 QKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRE-----LVNLVVVGGFID 615 (815)
T ss_pred HhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCC-----CcEEEEEECCcc
Confidence 1 0122221123456689999999999999999999998876555 39999999872
Q ss_pred CC---CcchhHHHHHHHHHHHHcCCCCcEEEecCC----ChHHHHHHHHh-cceEEeCCCCCCCCccHHhhhhcCCCEEE
Q psy12587 241 PH---NIENVEYYKELGVLVKKLKLSDNVLFLTSP----SDAAKISLFKF-CHCIIYTPSNEHFGIVPIEAMFCKRPVIA 312 (390)
Q Consensus 241 ~~---~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~----~~~e~~~~~~~-adv~v~ps~~e~~~~~~~Ea~a~G~pvi~ 312 (390)
.. ..+......++.++++++++.++|.|+|.. +..++..+++. +|++++||.+|+||++++|||+||+|||+
T Consensus 616 ~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVA 695 (815)
T PLN00142 616 PSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFA 695 (815)
T ss_pred ccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEE
Confidence 11 111223345688899999999999999854 34677777774 79999999999999999999999999999
Q ss_pred ecCCCcccceecCcceeeecC-CHHHHHHHHHHH----hcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHH
Q psy12587 313 VNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKI----VDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIV 381 (390)
Q Consensus 313 ~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
|+.||..|++.++.+|+++++ |+++++++|.++ ++|++ .+++|++++++.+.++|||+.++++++++.
T Consensus 696 TdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~-lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 696 TCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPS-YWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred cCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999999999999 999999998765 46888 999999999999989999999999999875
|
|
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-40 Score=293.92 Aligned_cols=331 Identities=21% Similarity=0.242 Sum_probs=254.1
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCccccccCCCcceEEeccccccccchhhHHHHHHHHHHHH-HHHHHHhh-cCCC
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVI-ALYVAWYS-EKPD 78 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~D 78 (390)
.+|.++++.++ ++|.++||+|+++................... . .... ...+..+.. ......++ .+||
T Consensus 10 ~~~~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~---~--~~~~---~~~~~~~~~~~~~~~~~~~~~~D 81 (355)
T cd03799 10 PRLSETFILREILALEAAGHEVEIFSLRPPEDTLVHPEDRAELA---R--TRYL---ARSLALLAQALVLARELRRLGID 81 (355)
T ss_pred CCcchHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccc---c--hHHH---HHHHHHHHHHHHHHHHHHhcCCC
Confidence 35688999999 99999999999881111100000000000000 0 0000 111111111 11112344 8999
Q ss_pred EEEEcccccchhHH----HhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHHh
Q psy12587 79 LVFCDLVSICIPIL----QAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATF 154 (390)
Q Consensus 79 vi~~~~~~~~~~~~----~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~ 154 (390)
+||+|.......+. +..++|+++++|+.+.+..... ..++..++.+|.++++|+..++.+.+.+
T Consensus 82 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~vi~~s~~~~~~l~~~~ 149 (355)
T cd03799 82 HIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSPDA------------IDLDEKLARADFVVAISEYNRQQLIRLL 149 (355)
T ss_pred EEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccCch------------HHHHHHHhhCCEEEECCHHHHHHHHHhc
Confidence 99999853322222 2234899999997544321110 4556778899999999999999999976
Q ss_pred ccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEE
Q psy12587 155 RSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLV 234 (390)
Q Consensus 155 ~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~ 234 (390)
+ .+..++.++|||+|.+.+..... . ...+++.++++|++.+.||++.+++++..+.+..++ ++++
T Consensus 150 ~-~~~~~~~vi~~~~d~~~~~~~~~----~-----~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~-----~~l~ 214 (355)
T cd03799 150 G-CDPDKIHVVHCGVDLERFPPRPP----P-----PPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGID-----FRLD 214 (355)
T ss_pred C-CCcccEEEEeCCcCHHHcCCccc----c-----ccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCC-----eEEE
Confidence 3 44689999999999887765420 0 223678899999999999999999999999887664 9999
Q ss_pred EEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCC------CCCCccHHhhhhcCC
Q psy12587 235 VAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSN------EHFGIVPIEAMFCKR 308 (390)
Q Consensus 235 i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~------e~~~~~~~Ea~a~G~ 308 (390)
++|.++.. +.+++.++++++.++|.+.|+++.+++..+|++||++++||.. |++|++++|||++|+
T Consensus 215 i~G~~~~~--------~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~ 286 (355)
T cd03799 215 IVGDGPLR--------DELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGL 286 (355)
T ss_pred EEECCccH--------HHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCC
Confidence 99998876 8888899999988999999999999999999999999999998 999999999999999
Q ss_pred CEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHH
Q psy12587 309 PVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQ 376 (390)
Q Consensus 309 pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (390)
|||+++.++.++++.++.+|+++++ |+++++++|.+++++++ .+.++++++++.+.++|+|+..+++
T Consensus 287 Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 287 PVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDPE-LRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred CEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 9999999999999999989999998 99999999999999999 8999999999999999999998875
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-40 Score=295.91 Aligned_cols=332 Identities=19% Similarity=0.206 Sum_probs=250.1
Q ss_pred CCcchhhhHhh-HhhhhcCCceeec--CCc--cccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-c
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAH--DHC--FKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-E 75 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~--~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 75 (390)
.||+++++.++ ++|.+.||+|+++ ... .......+..+................. .... ...+ .
T Consensus 13 ~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------~~~~~~ 82 (357)
T cd03795 13 RGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRDEERNGHRVIRAPSLLNVASTPFSPS---FFKQ-------LKKLAK 82 (357)
T ss_pred CCcHHHHHHHHHHHHHhCCCceEEEecCCCCcchhhhccCceEEEeecccccccccccHH---HHHH-------HHhcCC
Confidence 59999999999 9999999999988 111 1111122223333322111111111000 0000 0133 8
Q ss_pred CCCEEEEcccccchhH-HHh--hcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHH
Q psy12587 76 KPDLVFCDLVSICIPI-LQA--KQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQA 152 (390)
Q Consensus 76 ~~Dvi~~~~~~~~~~~-~~~--~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~ 152 (390)
+||+||+|.+...... ... .++|.++++|+.... ..........+++++++.+|.++++|+...+.+..
T Consensus 83 ~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--------~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~ 154 (357)
T cd03795 83 KADVIHLHFPNPLADLALLLLPRKKPVVVHWHSDIVK--------QKLLLKLYRPLQRRFLRRADAIVATSPNYAETSPV 154 (357)
T ss_pred CCCEEEEecCcchHHHHHHHhccCceEEEEEcChhhc--------cchhhhhhhHHHHHHHHhcCEEEeCcHHHHHHHHH
Confidence 9999999985432222 111 248899999963211 11222334566778899999999999999998877
Q ss_pred HhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceE
Q psy12587 153 TFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVK 232 (390)
Q Consensus 153 ~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~ 232 (390)
.+. . ..++.++|||++...+.+.......... ...+.+.++++|++.+.||++.++++++++. + ++
T Consensus 155 ~~~-~-~~~~~~i~~gi~~~~~~~~~~~~~~~~~---~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~----~-----~~ 220 (357)
T cd03795 155 LRR-F-RDKVRVIPLGLDPARYPRPDALEEAIWR---RAAGRPFFLFVGRLVYYKGLDVLLEAAAALP----D-----AP 220 (357)
T ss_pred hcC-C-ccceEEecCCCChhhcCCcchhhhHhhc---CCCCCcEEEEecccccccCHHHHHHHHHhcc----C-----cE
Confidence 643 2 3789999999998877654321111111 2346788999999999999999999999987 2 89
Q ss_pred EEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCC--CCCCCccHHhhhhcCCCE
Q psy12587 233 LVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPS--NEHFGIVPIEAMFCKRPV 310 (390)
Q Consensus 233 l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~--~e~~~~~~~Ea~a~G~pv 310 (390)
++++|+++.. ..+++.+++++..++|.++|+++++++..+|+.||++++||. .|++|++++|||++|+||
T Consensus 221 l~i~G~g~~~--------~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pv 292 (357)
T cd03795 221 LVIVGEGPLE--------AELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPV 292 (357)
T ss_pred EEEEeCChhH--------HHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCE
Confidence 9999998764 778888888888899999999999999999999999999986 599999999999999999
Q ss_pred EEecCCCcccceec-CcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHH
Q psy12587 311 IAVNSGGPKESVVD-GRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFS 374 (390)
Q Consensus 311 i~~~~~~~~e~i~~-~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (390)
|+++.++..+.+.+ +.+|+++++ |+++++++|.+++++++ .+++|++++++.+.++|||+.++
T Consensus 293 i~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~-~~~~~~~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 293 ISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDPE-LRERLGEAARERAEEEFTADRMV 357 (357)
T ss_pred EecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHhcchHhhC
Confidence 99999999998886 889999988 99999999999999999 99999999999999999999763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-40 Score=294.07 Aligned_cols=288 Identities=16% Similarity=0.157 Sum_probs=221.7
Q ss_pred HHhh-cCCCEEEEccccc---chhHHHhhcccEEEE-eecCCccccchhhhhhhhcccchhhHHH--HHhcCcceEEEcc
Q psy12587 71 AWYS-EKPDLVFCDLVSI---CIPILQAKQFKVLFY-CHYPDQLLSKQGSFLKSIYRFPLNKLEE--WTTCKADKIVVNS 143 (390)
Q Consensus 71 ~~~~-~~~Dvi~~~~~~~---~~~~~~~~~~~~v~~-~h~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ad~ii~~s 143 (390)
.+++ .+||+||+|...+ +.+++++.++|++++ .|+.... ........-+ ..+.+ .+...+| +++.|
T Consensus 274 ~~ir~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~--~~~r~~~~e~----~~~~~a~~i~~~sd-~v~~s 346 (578)
T PRK15490 274 PHLCERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPV--VRKRLFKPEY----EPLYQALAVVPGVD-FMSNN 346 (578)
T ss_pred HHHHHcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCc--chhhHHHHHH----HHhhhhceeEecch-hhhcc
Confidence 4677 9999999998654 334556667888665 5541110 0011000000 00111 2244455 77888
Q ss_pred HhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCcc--chhhhcC-CCCCCCCeEEEEeecccccCCHHHHHHHHHHHH
Q psy12587 144 EFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPE--PIENVLN-PLPGKEDIVFLSINRYERKKNLELAIYSLNSLR 220 (390)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~--~~~~~~~-~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~ 220 (390)
...++.+.+.++ .+++++.+||||+|...|.+.... ..+..+. .++ .+.++++++||+...||...+++++..+.
T Consensus 347 ~~v~~~l~~~lg-ip~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~-~~~~vIg~VgRl~~~Kg~~~LI~A~a~ll 424 (578)
T PRK15490 347 HCVTRHYADWLK-LEAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQ-DADTTIGGVFRFVGDKNPFAWIDFAARYL 424 (578)
T ss_pred HHHHHHHHHHhC-CCHHHEEEEeCCcchhhcCccchhhHHHHHHhhhccC-CCCcEEEEEEEEehhcCHHHHHHHHHHHH
Confidence 888888888764 558899999999999877664321 1122111 022 35578899999999999999999999988
Q ss_pred hhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccH
Q psy12587 221 SRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVP 300 (390)
Q Consensus 221 ~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~ 300 (390)
+..|+ ++|+|+|+|+.. ++++++++++++.++|.|+|+.+ ++..+|+.+|++++||.+|+||+++
T Consensus 425 k~~pd-----irLvIVGdG~~~--------eeLk~la~elgL~d~V~FlG~~~--Dv~~~LaaADVfVlPS~~EGfp~vl 489 (578)
T PRK15490 425 QHHPA-----TRFVLVGDGDLR--------AEAQKRAEQLGILERILFVGASR--DVGYWLQKMNVFILFSRYEGLPNVL 489 (578)
T ss_pred hHCCC-----eEEEEEeCchhH--------HHHHHHHHHcCCCCcEEECCChh--hHHHHHHhCCEEEEcccccCccHHH
Confidence 87775 999999999765 88999999999999999999854 5689999999999999999999999
Q ss_pred HhhhhcCCCEEEecCCCcccceecCcceeeecC-CHHHHHHHH---HHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHH
Q psy12587 301 IEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAM---KKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQ 376 (390)
Q Consensus 301 ~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (390)
+|||+||+|||+|+.+|.+|++.++.+|+++++ |++++++++ ..+.++.. .+..+++++++.+.++|||+.++++
T Consensus 490 LEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~-~~~~mg~~ARe~V~e~FS~e~Mv~~ 568 (578)
T PRK15490 490 IEAQMVGVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWR-SRTGICQQTQSFLQERFTVEHMVGT 568 (578)
T ss_pred HHHHHhCCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhCCHHHHHHH
Confidence 999999999999999999999999999999998 888888876 44555555 5667889999999999999999999
Q ss_pred HHHHHHh
Q psy12587 377 LNTIVNN 383 (390)
Q Consensus 377 ~~~~~~~ 383 (390)
|.++|.+
T Consensus 569 y~ki~~~ 575 (578)
T PRK15490 569 FVKTIAS 575 (578)
T ss_pred HHHHHHh
Confidence 9999975
|
|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=292.59 Aligned_cols=353 Identities=19% Similarity=0.165 Sum_probs=252.0
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecC--CccccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cCC
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHD--HCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EKP 77 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 77 (390)
.||+++++.++ ++|.+.||+|+++. ...................... ............ .......... .+|
T Consensus 13 ~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~ 88 (375)
T cd03821 13 YGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVALNGVPVKLFSINV---AYGLNLARYLFP-PSLLAWLRLNIREA 88 (375)
T ss_pred cCCeehHHHHHHHHHHhcCCcEEEEecCCCCccchhhccCceeeecccch---hhhhhhhhhccC-hhHHHHHHHhCCCC
Confidence 59999999999 99999999999881 1111111100000000000000 000000000000 0000111223 799
Q ss_pred CEEEEccccc--chhHHHh---hcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHH
Q psy12587 78 DLVFCDLVSI--CIPILQA---KQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQA 152 (390)
Q Consensus 78 Dvi~~~~~~~--~~~~~~~---~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~ 152 (390)
|+||+++... ....... .++|++++.|+.............+... ....++..++.++.+++.|+........
T Consensus 89 dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~s~~~~~~~~~ 166 (375)
T cd03821 89 DIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPHKALKKRLA--WFLFERRLLQAAAAVHATSEQEAAEIRR 166 (375)
T ss_pred CEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccccchhhhHHH--HHHHHHHHHhcCCEEEECCHHHHHHHHh
Confidence 9999998422 2222222 3499999999753322111111111111 1234567788999999999887777666
Q ss_pred HhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceE
Q psy12587 153 TFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVK 232 (390)
Q Consensus 153 ~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~ 232 (390)
... ..++.++|||+|.+.+........+...+ ..++.++++++|++.+.||++.+++++..+.+++++ ++
T Consensus 167 ~~~---~~~~~vi~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~-----~~ 236 (375)
T cd03821 167 LGL---KAPIAVIPNGVDIPPFAALPSRGRRRKFP--ILPDKRIILFLGRLHPKKGLDLLIEAFAKLAERFPD-----WH 236 (375)
T ss_pred hCC---cccEEEcCCCcChhccCcchhhhhhhhcc--CCCCCcEEEEEeCcchhcCHHHHHHHHHHhhhhcCC-----eE
Confidence 433 67899999999988776543222122222 334778999999999999999999999999988775 99
Q ss_pred EEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEE
Q psy12587 233 LVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIA 312 (390)
Q Consensus 233 l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~ 312 (390)
|+++|.++.. +...++..++++++.++|.++|+++++++.++|+.||++++||..|++|++++|||+||+|||+
T Consensus 237 l~i~G~~~~~------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~ 310 (375)
T cd03821 237 LVIAGPDEGG------YRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVT 310 (375)
T ss_pred EEEECCCCcc------hHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEE
Confidence 9999987652 3355666668889999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHH
Q psy12587 313 VNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLN 378 (390)
Q Consensus 313 ~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (390)
++.++..+++.+ .+|++++.+.++++++|.+++++++ .++.+++++++.+.++|+|+.+++++.
T Consensus 311 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~l~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 311 TDKVPWQELIEY-GCGWVVDDDVDALAAALRRALELPQ-RLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred cCCCCHHHHhhc-CceEEeCCChHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 999999999988 7888887777999999999999998 999999999999889999999999875
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=292.48 Aligned_cols=336 Identities=12% Similarity=0.082 Sum_probs=221.3
Q ss_pred CCcchhhhHhh-HhhhhcCCceeec---CCcccc-ccCCCcc-eEEeccccccccchhhHHHH------HHHHHHHHHHH
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAH---DHCFKE-TKDGTLP-VKVIGDWLPRNIFGKFYALC------MYLRMIVIALY 69 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~---~~~~~~-~~~~~~~-i~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 69 (390)
.||+|+.+.+| +.|.++||+|.+. +..... .....+. +..... .+.....+. ...........
T Consensus 12 ~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
T PRK10125 12 EGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTP-----RMTAMANIALFRLFNRDLFGNFNELY 86 (405)
T ss_pred CCchhHHHHHHHHHHHhcCCeEEEEEecCCCcccccccCCcceEEEecc-----cHHHHHHHHHHHhcchhhcchHHHHH
Confidence 59999999999 9999999998776 111111 1111111 111100 000000000 00000011111
Q ss_pred HHHhh-cCCCEEEEccccc---chh-HHH------hh--cccEEEEeecCCccccch------hhh------------h-
Q psy12587 70 VAWYS-EKPDLVFCDLVSI---CIP-ILQ------AK--QFKVLFYCHYPDQLLSKQ------GSF------------L- 117 (390)
Q Consensus 70 ~~~~~-~~~Dvi~~~~~~~---~~~-~~~------~~--~~~~v~~~h~~~~~~~~~------~~~------------~- 117 (390)
..+.+ .+|||||.|+... .+. +.. +. ++|+|+|.|+.+...... ..+ .
T Consensus 87 ~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~ 166 (405)
T PRK10125 87 RTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYP 166 (405)
T ss_pred HHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCC
Confidence 11224 8999999998654 222 111 22 289999999877542100 000 0
Q ss_pred hhhcc---c---chhhHHHHHhcCcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCC
Q psy12587 118 KSIYR---F---PLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPG 191 (390)
Q Consensus 118 ~~~~~---~---~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~ 191 (390)
..... + ..+...+.+.+.++.++++|++.++.+.+.++ ..++.+||||+|.+.+...+...... ..
T Consensus 167 ~~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~~---~~~i~vI~NGid~~~~~~~~~~~~~~-----~~ 238 (405)
T PRK10125 167 PVKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYG---PGRCRIINNGIDMATEAILAELPPVR-----ET 238 (405)
T ss_pred CCccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHcC---CCCEEEeCCCcCcccccccccccccc-----cC
Confidence 00000 0 11122233455678999999999999887655 57899999999964322211100000 11
Q ss_pred CCCeEEEEeecc--cccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEe
Q psy12587 192 KEDIVFLSINRY--ERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFL 269 (390)
Q Consensus 192 ~~~~~i~~~g~~--~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~ 269 (390)
.++++++++|+. .+.||++.+++|+..+.. +++|+++|.++.. . .+++.++
T Consensus 239 ~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~~--------~~~L~ivG~g~~~--------~-----------~~~v~~~ 291 (405)
T PRK10125 239 QGKPKIAVVAHDLRYDGKTDQQLVREMMALGD--------KIELHTFGKFSPF--------T-----------AGNVVNH 291 (405)
T ss_pred CCCCEEEEEEeccccCCccHHHHHHHHHhCCC--------CeEEEEEcCCCcc--------c-----------ccceEEe
Confidence 255678999984 368999999999998742 3899999987532 1 2468889
Q ss_pred cCC-ChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhc
Q psy12587 270 TSP-SDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVD 347 (390)
Q Consensus 270 g~~-~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~ 347 (390)
|+. +..++.++|+.||++++||..|+||++++||||||+|||+|+.||.+|++.++ +|+++++ |+++|++.+.
T Consensus 292 g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~~---- 366 (405)
T PRK10125 292 GFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTVSEEEVLQLAQLSK---- 366 (405)
T ss_pred cCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEECCCCHHHHHhccC----
Confidence 986 45788999999999999999999999999999999999999999999999875 8999999 9999998542
Q ss_pred CChhHHHH----HHHHHHHHHhhhcCHHHHHHHHHHHHHhh
Q psy12587 348 NDGNIIQQ----FSQFGFNRFNEKFSFQAFSIQLNTIVNNM 384 (390)
Q Consensus 348 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (390)
+. ..++ +..++++.+.++||++.+++++.++|+++
T Consensus 367 -~~-~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 367 -PE-IAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred -HH-HHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 22 3322 23567888888999999999999999864
|
|
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=292.67 Aligned_cols=329 Identities=16% Similarity=0.217 Sum_probs=234.0
Q ss_pred CCcchhhhHhh-Hhhhhc--CCceeec--CCccccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-c
Q psy12587 2 LGATARLTITA-TAWGAT--GPRTTAH--DHCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-E 75 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~--G~~V~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 75 (390)
.||+|+++.++ ++|.++ ||+|+++ +............+... .+.......... ... ..+. .+++ .
T Consensus 13 ~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~----~~l~-~~l~~~ 83 (359)
T PRK09922 13 FGGMETVISNVINTFEESKINCEMFFFCRNDKMDKAWLKEIKYAQS---FSNIKLSFLRRA-KHV----YNFS-KWLKET 83 (359)
T ss_pred CCchhHHHHHHHHHhhhcCcceeEEEEecCCCCChHHHHhcchhcc---cccchhhhhccc-HHH----HHHH-HHHHhc
Confidence 59999999999 999999 7888776 21111100000110000 000000000000 001 1111 3455 8
Q ss_pred CCCEEEEcccccchhHH---Hhhc--ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHH
Q psy12587 76 KPDLVFCDLVSICIPIL---QAKQ--FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVV 150 (390)
Q Consensus 76 ~~Dvi~~~~~~~~~~~~---~~~~--~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 150 (390)
+||+||+|+........ +..+ .+++.+.|.... .. ... . ...+..+|.++++|+..++.+
T Consensus 84 ~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~-----~~----~~~----~--~~~~~~~d~~i~~S~~~~~~~ 148 (359)
T PRK09922 84 QPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLD-----HK----KHA----E--CKKITCADYHLAISSGIKEQM 148 (359)
T ss_pred CCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCccc-----cc----chh----h--hhhhhcCCEEEEcCHHHHHHH
Confidence 99999999854333222 2223 345555563211 00 000 0 111368999999999999999
Q ss_pred HHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeeccc--ccCCHHHHHHHHHHHHhhcccccc
Q psy12587 151 QATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYE--RKKNLELAIYSLNSLRSRLSDEMK 228 (390)
Q Consensus 151 ~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~--~~K~~~~ll~a~~~l~~~~~~~~~ 228 (390)
.+. +.+.+++.++|||+|.+.+..... ...++++++++||+. ..||++.+++++..+..
T Consensus 149 ~~~--~~~~~ki~vi~N~id~~~~~~~~~----------~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~------- 209 (359)
T PRK09922 149 MAR--GISAQRISVIYNPVEIKTIIIPPP----------ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTTG------- 209 (359)
T ss_pred HHc--CCCHHHEEEEcCCCCHHHccCCCc----------ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhCC-------
Confidence 874 344678999999998654332111 113567899999986 46999999999998754
Q ss_pred cceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCCh--HHHHHHHHhcceEEeCCCCCCCCccHHhhhhc
Q psy12587 229 THVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSD--AAKISLFKFCHCIIYTPSNEHFGIVPIEAMFC 306 (390)
Q Consensus 229 ~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~--~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~ 306 (390)
+++|+++|+|+.. +++++.+++++++++|.|+|++++ +++.++|+.+|++++||.+||||++++|||||
T Consensus 210 -~~~l~ivG~g~~~--------~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~ 280 (359)
T PRK09922 210 -EWQLHIIGDGSDF--------EKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSY 280 (359)
T ss_pred -CeEEEEEeCCccH--------HHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCcEEEECCcccCcChHHHHHHHc
Confidence 3999999999875 889999999999999999999865 78899999999999999999999999999999
Q ss_pred CCCEEEec-CCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhh
Q psy12587 307 KRPVIAVN-SGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNM 384 (390)
Q Consensus 307 G~pvi~~~-~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (390)
|+|||+++ .++..|++.++.+|+++++ |+++++++|.+++++++ .+. .++......+|+.+.+.+++.++|..+
T Consensus 281 G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (359)
T PRK09922 281 GIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEV-KYQ---HDAIPNSIERFYEVLYFKNLNNALFSK 356 (359)
T ss_pred CCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCcc-cCC---HHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 99999999 8999999999999999998 99999999999999997 542 223333347888899999999999887
Q ss_pred hh
Q psy12587 385 LD 386 (390)
Q Consensus 385 ~~ 386 (390)
++
T Consensus 357 ~~ 358 (359)
T PRK09922 357 LQ 358 (359)
T ss_pred hc
Confidence 65
|
|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-39 Score=290.77 Aligned_cols=354 Identities=22% Similarity=0.276 Sum_probs=265.9
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCcc--ccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cCC
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHCF--KETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EKP 77 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 77 (390)
.||.+.++..+ ++|.+.||+|+++.... ............... ........ .............+++ .+|
T Consensus 13 ~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 86 (374)
T cd03801 13 VGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRP-PPLLRVRR-----LLLLLLLALRLRRLLRRERF 86 (374)
T ss_pred cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeeecCcceecC-Ccccccch-----hHHHHHHHHHHHHHhhhcCC
Confidence 38999999999 99999999998881111 111000000000000 00000000 0011111111123444 899
Q ss_pred CEEEEcccccchhH---HHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHHh
Q psy12587 78 DLVFCDLVSICIPI---LQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATF 154 (390)
Q Consensus 78 Dvi~~~~~~~~~~~---~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~ 154 (390)
|+||++.+...... .+..++|+++++|+......... ...........++..++.+|.+++.|+..++.+.+.+
T Consensus 87 Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~ 163 (374)
T cd03801 87 DVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGRPGNE---LGLLLKLARALERRALRRADRIIAVSEATREELRELG 163 (374)
T ss_pred cEEEEechhHHHHHHHHHHhcCCcEEEEeccchhhccccc---hhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhcC
Confidence 99999996554442 33344999999998654322211 1222333456677889999999999999999999876
Q ss_pred ccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEE
Q psy12587 155 RSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLV 234 (390)
Q Consensus 155 ~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~ 234 (390)
+.. ..++.++|||++...+.+.. ...+.... ...+.+.++++|++...||++.+++++..+.+..++ ++|+
T Consensus 164 ~~~-~~~~~~i~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~-----~~l~ 234 (374)
T cd03801 164 GVP-PEKITVIPNGVDTERFRPAP-RAARRRLG--IPEDEPVILFVGRLVPRKGVDLLLEALAKLRKEYPD-----VRLV 234 (374)
T ss_pred CCC-CCcEEEecCcccccccCccc-hHHHhhcC--CcCCCeEEEEecchhhhcCHHHHHHHHHHHhhhcCC-----eEEE
Confidence 522 36899999999988775432 11111111 334678999999999999999999999999887764 9999
Q ss_pred EEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEec
Q psy12587 235 VAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVN 314 (390)
Q Consensus 235 i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~ 314 (390)
++|.++.. ..+++.+++++..++|.+.|+++++++.++|+.||++++|+..|++|++++|||++|+|||+++
T Consensus 235 i~G~~~~~--------~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~ 306 (374)
T cd03801 235 IVGDGPLR--------EELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASD 306 (374)
T ss_pred EEeCcHHH--------HHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecchhccccchHHHHHHcCCcEEEeC
Confidence 99976543 7788888888888999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q psy12587 315 SGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVN 382 (390)
Q Consensus 315 ~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
.++..+++.++.+|+++++ |+++++++|.+++++++ .++++++++++.+.+.|+|+.+++++.++|+
T Consensus 307 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 307 VGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPE-LRRRLGEAARERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred CCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhC
Confidence 9999999998899999998 89999999999999999 9999999999888899999999999998873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=291.43 Aligned_cols=351 Identities=19% Similarity=0.256 Sum_probs=255.1
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCcccc--ccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cCC
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHCFKE--TKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EKP 77 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 77 (390)
.||+++.+..+ ++|.++||+|+++...... .......+..... ................ .....++ .+|
T Consensus 13 ~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 85 (374)
T cd03817 13 VNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEVVVVRPFRV--PTFKYPDFRLPLPIPR-----ALIIILKELGP 85 (374)
T ss_pred CCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCccccccccccccc--ccchhhhhhccccHHH-----HHHHHHhhcCC
Confidence 58999999999 9999999999988211111 1111111111100 0000011100111111 1112344 899
Q ss_pred CEEEEcccccch-hH---HHhhcccEEEEeecCCccccchhhhhhhhcccchh-hHHHHHhcCcceEEEccHhHHHHHHH
Q psy12587 78 DLVFCDLVSICI-PI---LQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLN-KLEEWTTCKADKIVVNSEFTKSVVQA 152 (390)
Q Consensus 78 Dvi~~~~~~~~~-~~---~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ad~ii~~s~~~~~~~~~ 152 (390)
|+||++.+.... .. .+..++|++++.|+..................... .+++..++.+|.++++|+..++.+.+
T Consensus 86 Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~ 165 (374)
T cd03817 86 DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLRE 165 (374)
T ss_pred CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHHh
Confidence 999999853322 22 22334899999997543221111111112222222 57788899999999999999988877
Q ss_pred HhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceE
Q psy12587 153 TFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVK 232 (390)
Q Consensus 153 ~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~ 232 (390)
.. . ..++.++|||+|...+.+......++.++ ..+++++++++|++.+.||++.++++++.+.++.++ ++
T Consensus 166 ~~--~-~~~~~vi~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~-----~~ 235 (374)
T cd03817 166 YG--V-KRPIEVIPTGIDLDRFEPVDGDDERRKLG--IPEDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPD-----VK 235 (374)
T ss_pred cC--C-CCceEEcCCccchhccCccchhHHHHhcC--CCCCCeEEEEEeeeecccCHHHHHHHHHHHHHhCCC-----eE
Confidence 52 2 45699999999988776654332222222 234678899999999999999999999999887664 99
Q ss_pred EEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEE
Q psy12587 233 LVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIA 312 (390)
Q Consensus 233 l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~ 312 (390)
++++|+++.. +.+++.++++++.++|.++|+++++++..+|+.||++++|+..|++|++++|||+||+|||+
T Consensus 236 l~i~G~~~~~--------~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~ 307 (374)
T cd03817 236 LVIVGDGPER--------EELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVVA 307 (374)
T ss_pred EEEEeCCchH--------HHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCcEEE
Confidence 9999988754 78888888889889999999999999999999999999999999999999999999999999
Q ss_pred ecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHh
Q psy12587 313 VNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNN 383 (390)
Q Consensus 313 ~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
++.++..+++.++.+|+++++ +. +++++|.+++++++ .++++++++++.+. +++ ..+++.++|++
T Consensus 308 ~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~-~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~ 373 (374)
T cd03817 308 VDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPE-LRRRLSKNAEESAE-KFS---FAKKVEKLYEE 373 (374)
T ss_pred eCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChH-HHHHHHHHHHHHHH-HHH---HHHHHHHHHhc
Confidence 999999999999999999988 55 99999999999999 88999999999984 444 55666666654
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=293.43 Aligned_cols=345 Identities=19% Similarity=0.164 Sum_probs=253.7
Q ss_pred CCcchhhhHhh-HhhhhcCCceeec--C-CccccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cC
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAH--D-HCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EK 76 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~--~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (390)
.||+++++.++ ++|.+.||+|+++ . ....................... ... ......... . ...+ .+
T Consensus 14 ~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~-~-~~~~~~~ 85 (365)
T cd03809 14 PTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLRAALRLLLRLPRRL---LWG---LLFLLRAGD-R-LLLLLLG 85 (365)
T ss_pred CCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccchhcccccccccccc---ccc---hhhHHHHHH-H-HHhhhcC
Confidence 59999999999 9999999998877 1 11111111000010000000000 000 011111000 1 1223 89
Q ss_pred CCEEEEcccccchhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHHhcc
Q psy12587 77 PDLVFCDLVSICIPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRS 156 (390)
Q Consensus 77 ~Dvi~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~ 156 (390)
||+||+++...... +..++|+++++|+........ ............+++.+++.+|.++++|+..++.+.+.++.
T Consensus 86 ~Dii~~~~~~~~~~--~~~~~~~i~~~hd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~ 161 (365)
T cd03809 86 LDLLHSPHNTAPLL--RLRGVPVVVTIHDLIPLRFPE--YFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYLGV 161 (365)
T ss_pred CCeeeecccccCcc--cCCCCCEEEEeccchhhhCcc--cCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHhCc
Confidence 99999999655444 455699999999754322211 11111223345677888999999999999999999998753
Q ss_pred CCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEE
Q psy12587 157 LDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVA 236 (390)
Q Consensus 157 ~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~ 236 (390)
+..++.++|||++...+....... +.... ...+++.++++|++.+.||++.+++++..+.+..++ ++|+++
T Consensus 162 -~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~-----~~l~i~ 232 (365)
T cd03809 162 -PPDKIVVIPLGVDPRFRPPPAEAE-VLRAL--YLLPRPYFLYVGTIEPRKNLERLLEAFARLPAKGPD-----PKLVIV 232 (365)
T ss_pred -CHHHEEeeccccCccccCCCchHH-HHHHh--cCCCCCeEEEeCCCccccCHHHHHHHHHHHHHhcCC-----CCEEEe
Confidence 357899999999988776543221 11111 234678899999999999999999999999988764 899999
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCC
Q psy12587 237 GGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSG 316 (390)
Q Consensus 237 G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~ 316 (390)
|.+.... ....+.+++.+..++|.++|+++++++.++|+.||++++||..|++|++++|||++|+|||+++.+
T Consensus 233 G~~~~~~-------~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~ 305 (365)
T cd03809 233 GKRGWLN-------EELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNIS 305 (365)
T ss_pred cCCcccc-------HHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCC
Confidence 9876531 333444467788899999999999999999999999999999999999999999999999999999
Q ss_pred CcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHH
Q psy12587 317 GPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLN 378 (390)
Q Consensus 317 ~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (390)
+..|++. .+|+++++ |.++++++|.+++++++ .+..+++++++.+ ++|+|+.+++++.
T Consensus 306 ~~~e~~~--~~~~~~~~~~~~~~~~~i~~l~~~~~-~~~~~~~~~~~~~-~~~sw~~~~~~~~ 364 (365)
T cd03809 306 SLPEVAG--DAALYFDPLDPEALAAAIERLLEDPA-LREELRERGLARA-KRFSWEKTARRTL 364 (365)
T ss_pred Cccceec--CceeeeCCCCHHHHHHHHHHHhcCHH-HHHHHHHHHHHHH-HhCCHHHHHHHHh
Confidence 9999884 46888888 99999999999999999 9999999999765 8999999999876
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-39 Score=288.37 Aligned_cols=340 Identities=21% Similarity=0.241 Sum_probs=259.3
Q ss_pred CCcchhhhHhh-HhhhhcCCceeec--C--Cc-cccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAH--D--HC-FKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS- 74 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~--~--~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 74 (390)
.||+++++..| ++|.+.||+|.++ . .. .......++.+..+..... ...+...... ..+++
T Consensus 11 ~gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~---~~~~~~~~~~---------~~~~~~ 78 (365)
T cd03807 11 VGGAERMLVRLLKGLDRDRFEHVVISLTDRGELGEELEEAGVPVYCLGKRPG---RPDPGALLRL---------YKLIRR 78 (365)
T ss_pred CccHHHHHHHHHHHhhhccceEEEEecCcchhhhHHHHhcCCeEEEEecccc---cccHHHHHHH---------HHHHHh
Confidence 49999999999 9999999998777 1 11 1122234556655532211 0111111111 12344
Q ss_pred cCCCEEEEcccccchh---HHHh-hcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHH
Q psy12587 75 EKPDLVFCDLVSICIP---ILQA-KQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVV 150 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~---~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 150 (390)
.+||+||++....... .... .++|++++.|+...... ........++.+.+.+.+|.++++|+...+.+
T Consensus 79 ~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~ 151 (365)
T cd03807 79 LRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG-------KKSTRLVARLRRLLSSFIPLIVANSAAAAEYH 151 (365)
T ss_pred hCCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc-------chhHhHHHHHHHHhccccCeEEeccHHHHHHH
Confidence 8999999987543332 2223 34899999997654321 11222334566777888999999999999998
Q ss_pred HHHhccCCCCceeecCCCCCCCCCCCCCc--cchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccc
Q psy12587 151 QATFRSLDHKCLDILYPSVYTEGLEKTTP--EPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMK 228 (390)
Q Consensus 151 ~~~~~~~~~~~~~vi~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~ 228 (390)
.+. +.+..++.++|||+|...+.+... ...+++++ ++ ++.+.++++|++.+.||++.+++++..+.++.++
T Consensus 152 ~~~--~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~--- 224 (365)
T cd03807 152 QAI--GYPPKKIVVIPNGVDTERFSPDLDARARLREELG-LP-EDTFLIGIVARLHPQKDHATLLRAAALLLKKFPN--- 224 (365)
T ss_pred HHc--CCChhheeEeCCCcCHHhcCCcccchHHHHHhcC-CC-CCCeEEEEecccchhcCHHHHHHHHHHHHHhCCC---
Confidence 875 344678999999999877655432 11223333 22 4678899999999999999999999999887775
Q ss_pred cceEEEEEcCCCCCCcchhHHHHHHHHHHH-HcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcC
Q psy12587 229 THVKLVVAGGYDPHNIENVEYYKELGVLVK-KLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCK 307 (390)
Q Consensus 229 ~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~-~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G 307 (390)
++|+++|.++.. ...+.... +.++.++|.+.|..+ ++..+|+.||++++||..|++|++++|||+||
T Consensus 225 --~~l~i~G~~~~~--------~~~~~~~~~~~~~~~~v~~~g~~~--~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g 292 (365)
T cd03807 225 --ARLLLVGDGPDR--------ANLELLALKELGLEDKVILLGERS--DVPALLNALDVFVLSSLSEGFPNVLLEAMACG 292 (365)
T ss_pred --eEEEEecCCcch--------hHHHHHHHHhcCCCceEEEccccc--cHHHHHHhCCEEEeCCccccCCcHHHHHHhcC
Confidence 999999998765 55566665 788889999999654 56899999999999999999999999999999
Q ss_pred CCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q psy12587 308 RPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVN 382 (390)
Q Consensus 308 ~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
+|||+++.++..+++.+ +|++++. |+++++++|.+++++++ .+.++++++++.+.++|+|+..++++.++|+
T Consensus 293 ~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 293 LPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALLADPA-LRQALGEAARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred CCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHHhChH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999999999999977 8899988 99999999999999998 9999999999999999999999999999874
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=285.69 Aligned_cols=350 Identities=21% Similarity=0.238 Sum_probs=262.9
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCcccccc-CCCcce---E---EeccccccccchhhHHHHHHHHHHHHHHHHHHh
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHCFKETK-DGTLPV---K---VIGDWLPRNIFGKFYALCMYLRMIVIALYVAWY 73 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~~~~~~-~~~~~i---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (390)
.||+++++..+ ++|.+.||+|+++........ ...... . ................. ..........+.
T Consensus 13 ~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~ 88 (377)
T cd03798 13 NGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGPLLY----LLAARALLKLLK 88 (377)
T ss_pred CchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhcccccccccccccCcchhhccccchhH----HHHHHHHHHHHh
Confidence 49999999999 999999999998821111110 000000 0 00000000000111111 111112222233
Q ss_pred --hcCCCEEEEcccccch-hHHHhh---cccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHH
Q psy12587 74 --SEKPDLVFCDLVSICI-PILQAK---QFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTK 147 (390)
Q Consensus 74 --~~~~Dvi~~~~~~~~~-~~~~~~---~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~ 147 (390)
..+||+|+++...... ...... ++|+++++|+.......... .....++..++.+|.++++|+..+
T Consensus 89 ~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~--------~~~~~~~~~~~~~d~ii~~s~~~~ 160 (377)
T cd03798 89 LKRFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR--------LLRALLRRALRRADAVIAVSEALA 160 (377)
T ss_pred cccCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh--------hHHHHHHHHHhcCCeEEeCCHHHH
Confidence 3899999999743322 222222 26999999986543222111 345666788999999999999999
Q ss_pred HHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhccccc
Q psy12587 148 SVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEM 227 (390)
Q Consensus 148 ~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~ 227 (390)
+.+.+.+ .+..++.++|||+|...+.+...... .... ..++.+.++++|++.+.||++.++++++.+.+++++
T Consensus 161 ~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~-- 233 (377)
T cd03798 161 DELKALG--IDPEKVTVIPNGVDTERFSPADRAEA-RKLG--LPEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPD-- 233 (377)
T ss_pred HHHHHhc--CCCCceEEcCCCcCcccCCCcchHHH-Hhcc--CCCCceEEEEeccCccccCHHHHHHHHHHHHhcCCC--
Confidence 9998864 33689999999999887765433211 1111 334778999999999999999999999999887664
Q ss_pred ccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcC
Q psy12587 228 KTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCK 307 (390)
Q Consensus 228 ~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G 307 (390)
++++++|.++.. +.+++.+++.++.++|.+.|+++++++.++|+.||++++|+..|++|++++|||++|
T Consensus 234 ---~~l~i~g~~~~~--------~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G 302 (377)
T cd03798 234 ---VHLVIVGDGPLR--------EALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACG 302 (377)
T ss_pred ---eEEEEEcCCcch--------HHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcC
Confidence 999999998765 778888888888899999999999999999999999999999999999999999999
Q ss_pred CCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhh
Q psy12587 308 RPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNM 384 (390)
Q Consensus 308 ~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (390)
+|||+++.++..+++.++.+|+++++ |+++++++|.++++++. . ++..++++.+.++|+|+..++++.++++++
T Consensus 303 ~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~-~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 303 LPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPW-L--RLGRAARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred CCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcH-H--HHhHHHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 99999999999999999999999998 99999999999999988 5 778888888889999999999999998763
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=285.35 Aligned_cols=338 Identities=20% Similarity=0.237 Sum_probs=248.2
Q ss_pred CCcchhhhHhh-HhhhhcCCceeec---CCccccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cC
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAH---DHCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EK 76 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (390)
.||+++++.++ ++|.++||+|+++ +...............+. ........ +.... . ...+++ .+
T Consensus 11 ~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------~~~~~-~-~~~~~~~~~ 79 (360)
T cd04951 11 LGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPPIDATIILNLN--MSKNPLSF-------LLALW-K-LRKILRQFK 79 (360)
T ss_pred CCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccchhhccceEEec--ccccchhh-------HHHHH-H-HHHHHHhcC
Confidence 59999999999 9999999999987 222111111111111111 11111111 11111 1 112445 89
Q ss_pred CCEEEEcccccchhHH---Hhh-cccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHH
Q psy12587 77 PDLVFCDLVSICIPIL---QAK-QFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQA 152 (390)
Q Consensus 77 ~Dvi~~~~~~~~~~~~---~~~-~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~ 152 (390)
||+||+|.....+... ... ++|++++.|+.... . ....+..+.....++.++++|+...+.+.+
T Consensus 80 pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~-----~-------~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 147 (360)
T cd04951 80 PDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEG-----G-------RLRMLAYRLTDFLSDLTTNVSKEALDYFIA 147 (360)
T ss_pred CCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCch-----h-------HHHHHHHHHHhhccCceEEEcHHHHHHHHh
Confidence 9999999865433221 122 27899999975321 0 011233345556688889999999998887
Q ss_pred HhccCCCCceeecCCCCCCCCCCCCCc--cchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccc
Q psy12587 153 TFRSLDHKCLDILYPSVYTEGLEKTTP--EPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTH 230 (390)
Q Consensus 153 ~~~~~~~~~~~vi~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~ 230 (390)
.. ..+.+++.++|||+|...+.+... ...++.++ ..+++++++++|++.+.||++.+++++..+.++.++
T Consensus 148 ~~-~~~~~~~~~i~ng~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~----- 219 (360)
T cd04951 148 SK-AFNANKSFVVYNGIDTDRFRKDPARRLKIRNALG--VKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLD----- 219 (360)
T ss_pred cc-CCCcccEEEEccccchhhcCcchHHHHHHHHHcC--cCCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCC-----
Confidence 63 234679999999999877654322 22333332 234678899999999999999999999999887775
Q ss_pred eEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCE
Q psy12587 231 VKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPV 310 (390)
Q Consensus 231 ~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pv 310 (390)
++|+|+|+++.. +++++.++++++.++|.++|+++ ++..+|+.||++++||..|++|++++|||++|+||
T Consensus 220 ~~l~i~G~g~~~--------~~~~~~~~~~~~~~~v~~~g~~~--~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~Pv 289 (360)
T cd04951 220 IKLLIAGDGPLR--------ATLERLIKALGLSNRVKLLGLRD--DIAAYYNAADLFVLSSAWEGFGLVVAEAMACELPV 289 (360)
T ss_pred eEEEEEcCCCcH--------HHHHHHHHhcCCCCcEEEecccc--cHHHHHHhhceEEecccccCCChHHHHHHHcCCCE
Confidence 999999998765 78888899999888999999864 56899999999999999999999999999999999
Q ss_pred EEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHh
Q psy12587 311 IAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNN 383 (390)
Q Consensus 311 i~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
|+++.++..|++.+ +|..+++ |+++++++|.++++++.+.+..++.+ ++.+.++|+|+.+++++.++|++
T Consensus 290 I~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y~~ 360 (360)
T cd04951 290 VATDAGGVREVVGD--SGLIVPISDPEALANKIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWLTLYTG 360 (360)
T ss_pred EEecCCChhhEecC--CceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhhC
Confidence 99999999999976 7888888 99999999999996555255566555 77788999999999999999863
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=285.57 Aligned_cols=336 Identities=20% Similarity=0.180 Sum_probs=241.8
Q ss_pred CCcchhhhHhh-HhhhhcCCceeec--CCccccccCCCc--ceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-c
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAH--DHCFKETKDGTL--PVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-E 75 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~--~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 75 (390)
.||+++++.+| ++|.+.||+|+++ ............ ..... ... ........ ...++ .
T Consensus 12 ~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~---------~~~~~~~ 75 (366)
T cd03822 12 KCGIATFTTDLVNALSARGPDVLVVSVAALYPSLLYGGEQEVVRVI----VLD---NPLDYRRA---------ARAIRLS 75 (366)
T ss_pred CCcHHHHHHHHHHHhhhcCCeEEEEEeecccCcccCCCcccceeee----ecC---CchhHHHH---------HHHHhhc
Confidence 59999999999 9999999998887 111111111000 00110 000 00000011 12344 8
Q ss_pred CCCEEEEccccc------chhHHHh---hcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhH
Q psy12587 76 KPDLVFCDLVSI------CIPILQA---KQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFT 146 (390)
Q Consensus 76 ~~Dvi~~~~~~~------~~~~~~~---~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~ 146 (390)
+||+||++.+.. ....... .++|+|+++|+..... ......++.+.+++.+|.++++|...
T Consensus 76 ~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~----------~~~~~~~~~~~~~~~~d~ii~~s~~~ 145 (366)
T cd03822 76 GPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHE----------PRPGDRALLRLLLRRADAVIVMSSEL 145 (366)
T ss_pred CCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccc----------cchhhhHHHHHHHhcCCEEEEeeHHH
Confidence 999999977321 1111221 3499999999851110 01122355677789999999997333
Q ss_pred HHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccc
Q psy12587 147 KSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDE 226 (390)
Q Consensus 147 ~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~ 226 (390)
...+... ....++.++|||++...+...... .... ...+.++++++|++.+.||++.+++++..+.+++++
T Consensus 146 ~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~--~~~~---~~~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~- 216 (366)
T cd03822 146 LRALLLR---AYPEKIAVIPHGVPDPPAEPPESL--KALG---GLDGRPVLLTFGLLRPYKGLELLLEALPLLVAKHPD- 216 (366)
T ss_pred HHHHHhh---cCCCcEEEeCCCCcCcccCCchhh--Hhhc---CCCCCeEEEEEeeccCCCCHHHHHHHHHHHHhhCCC-
Confidence 3222221 114799999999987766543221 1111 234678999999999999999999999999988775
Q ss_pred cccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecC-CChHHHHHHHHhcceEEeCCCCC--CCCccHHhh
Q psy12587 227 MKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTS-PSDAAKISLFKFCHCIIYTPSNE--HFGIVPIEA 303 (390)
Q Consensus 227 ~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~-~~~~e~~~~~~~adv~v~ps~~e--~~~~~~~Ea 303 (390)
++|+++|++...... ......++++++++.++|.++|. ++.+++..+|+.||++++||..| ++|++++||
T Consensus 217 ----~~l~i~G~~~~~~~~---~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea 289 (366)
T cd03822 217 ----VRLLVAGETHPDLER---YRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYA 289 (366)
T ss_pred ----eEEEEeccCccchhh---hhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHH
Confidence 999999988654110 00000134778899999999987 99999999999999999999999 999999999
Q ss_pred hhcCCCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q psy12587 304 MFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVN 382 (390)
Q Consensus 304 ~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
|+||+|||+++.++ .+.+.++.+|+++++ |+++++++|.+++++++ .+.++++++++.+.+ |+|+.+++++.++|+
T Consensus 290 ~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~~-~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~ 366 (366)
T cd03822 290 IGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADPE-LAQALRARAREYARA-MSWERVAERYLRLLA 366 (366)
T ss_pred HHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcChH-HHHHHHHHHHHHHhh-CCHHHHHHHHHHHhC
Confidence 99999999999998 777778889999998 99999999999999998 999999999999855 999999999999873
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=288.77 Aligned_cols=354 Identities=19% Similarity=0.165 Sum_probs=259.3
Q ss_pred CcchhhhHhh-HhhhhcCCceeecC--C--cccc-------ccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHH
Q psy12587 3 GATARLTITA-TAWGATGPRTTAHD--H--CFKE-------TKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYV 70 (390)
Q Consensus 3 GG~~~~~~~l-~~L~~~G~~V~~~~--~--~~~~-------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (390)
||.++++..+ ++|.++||+|+++. . .... ....++.+..+...... ....+..+..+..........
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 92 (394)
T cd03794 14 GGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKGYKREEVDGVRVHRVPLPPYK-KNGLLKRLLNYLSFALSALLA 92 (394)
T ss_pred CCcceeHHHHHHHHHhCCceEEEEecCCCcccccccccceEEecCCeEEEEEecCCCC-ccchHHHHHhhhHHHHHHHHH
Confidence 8999999999 99999999999881 1 1111 12234455444322111 111112222222222222222
Q ss_pred HHhh-cCCCEEEEccccc--chhHHH---hhcccEEEEeecCCccccchhhh--hhhhcccchhhHHHHHhcCcceEEEc
Q psy12587 71 AWYS-EKPDLVFCDLVSI--CIPILQ---AKQFKVLFYCHYPDQLLSKQGSF--LKSIYRFPLNKLEEWTTCKADKIVVN 142 (390)
Q Consensus 71 ~~~~-~~~Dvi~~~~~~~--~~~~~~---~~~~~~v~~~h~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~ 142 (390)
...+ .+||+||++.+.. ...... ..++|+++++|+........... ...........+++.+++.+|.++++
T Consensus 93 ~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 172 (394)
T cd03794 93 LLKRRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVI 172 (394)
T ss_pred HHhcccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEE
Confidence 2214 8999999997322 222222 22489999999754322111111 11111234567788899999999999
Q ss_pred cHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhh
Q psy12587 143 SEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSR 222 (390)
Q Consensus 143 s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~ 222 (390)
|+..++.+.. + ..+..++.++|||++...+.+......+.... ...+++.++++|++...||++.+++++..+.+.
T Consensus 173 s~~~~~~~~~-~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~ 248 (394)
T cd03794 173 SPGMREYLVR-R-GVPPEKISVIPNGVDLELFKPPPADESLRKEL--GLDDKFVVLYAGNIGRAQGLDTLLEAAALLKDR 248 (394)
T ss_pred CHHHHHHHHh-c-CCCcCceEEcCCCCCHHHcCCccchhhhhhcc--CCCCcEEEEEecCcccccCHHHHHHHHHHHhhc
Confidence 9999998873 2 34467999999999987665543221111111 334778999999999999999999999999876
Q ss_pred cccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCC-----C
Q psy12587 223 LSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHF-----G 297 (390)
Q Consensus 223 ~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~-----~ 297 (390)
++ ++++++|.++.. +.+++.+...++ ++|.++|+++++++.++|+.||++++|+..|++ |
T Consensus 249 -~~-----~~l~i~G~~~~~--------~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p 313 (394)
T cd03794 249 -PD-----IRFLIVGDGPEK--------EELKELAKALGL-DNVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSP 313 (394)
T ss_pred -CC-----eEEEEeCCcccH--------HHHHHHHHHcCC-CcEEEeCCCChHHHHHHHHhhCeeEEeccCcccccccCc
Confidence 53 999999998765 677776666665 689999999999999999999999999998765 7
Q ss_pred ccHHhhhhcCCCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHH
Q psy12587 298 IVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQ 376 (390)
Q Consensus 298 ~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (390)
++++|||++|+|||+++.++..+.+.++.+|+++++ |+++++++|.+++++++ .++++++++++.+.++|+|+.++++
T Consensus 314 ~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~ 392 (394)
T cd03794 314 SKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDPE-ERAEMGENGRRYVEEKFSREKLAER 392 (394)
T ss_pred hHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhChH-HHHHHHHHHHHHHHHhhcHHHHHHh
Confidence 789999999999999999999999999889999998 99999999999999999 9999999999999889999999987
Q ss_pred H
Q psy12587 377 L 377 (390)
Q Consensus 377 ~ 377 (390)
+
T Consensus 393 ~ 393 (394)
T cd03794 393 L 393 (394)
T ss_pred c
Confidence 6
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=283.44 Aligned_cols=314 Identities=20% Similarity=0.182 Sum_probs=230.0
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCccccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cCCCE
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EKPDL 79 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dv 79 (390)
.||+++++.+| ++|.+.||+|+++.......... ................ .............+++ .+||+
T Consensus 18 ~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~Di 90 (335)
T cd03802 18 YGGTERVVAALTEGLVARGHEVTLFASGDSKTAAP--LVPVVPEPLRLDAPGR-----DRAEAEALALAERALAAGDFDI 90 (335)
T ss_pred cCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccc--eeeccCCCcccccchh-----hHhhHHHHHHHHHHHhcCCCCE
Confidence 69999999999 99999999999882211111110 0111100000000000 0001111111123455 89999
Q ss_pred EEEcccccchhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHHhccCCC
Q psy12587 80 VFCDLVSICIPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDH 159 (390)
Q Consensus 80 i~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~ 159 (390)
||+|+........+..+.|+|++.|+........ ........+.++++|+..++.+...
T Consensus 91 vh~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~---------------~~~~~~~~~~~~~~s~~~~~~~~~~------ 149 (335)
T cd03802 91 VHNHSLHLPLPFARPLPVPVVTTLHGPPDPELLK---------------LYYAARPDVPFVSISDAQRRPWPPL------ 149 (335)
T ss_pred EEecCcccchhhhcccCCCEEEEecCCCCcccch---------------HHHhhCcCCeEEEecHHHHhhcccc------
Confidence 9999976555545555599999999764321110 1233567788999999888765442
Q ss_pred CceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCC
Q psy12587 160 KCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGY 239 (390)
Q Consensus 160 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~ 239 (390)
.++.++|||+|.+.+.+. + .++..++++|++.+.||++.+++++++. +++|+++|.+
T Consensus 150 ~~~~vi~ngvd~~~~~~~------------~-~~~~~i~~~Gr~~~~Kg~~~li~~~~~~----------~~~l~i~G~~ 206 (335)
T cd03802 150 PWVATVHNGIDLDDYPFR------------G-PKGDYLLFLGRISPEKGPHLAIRAARRA----------GIPLKLAGPV 206 (335)
T ss_pred cccEEecCCcChhhCCCC------------C-CCCCEEEEEEeeccccCHHHHHHHHHhc----------CCeEEEEeCC
Confidence 689999999999887652 2 2455789999999999999999997642 3899999999
Q ss_pred CCCCcchhHHHHHHHHHHHHcC-CCCcEEEecCCChHHHHHHHHhcceEEeCCC-CCCCCccHHhhhhcCCCEEEecCCC
Q psy12587 240 DPHNIENVEYYKELGVLVKKLK-LSDNVLFLTSPSDAAKISLFKFCHCIIYTPS-NEHFGIVPIEAMFCKRPVIAVNSGG 317 (390)
Q Consensus 240 ~~~~~~~~~y~~~~~~~~~~~~-l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~-~e~~~~~~~Ea~a~G~pvi~~~~~~ 317 (390)
+.. ..+.....+.. +.++|.|+|++++.++.++|+.+|++++||. .|++|++++|||+||+|||+++.++
T Consensus 207 ~~~--------~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~ 278 (335)
T cd03802 207 SDP--------DYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGA 278 (335)
T ss_pred CCH--------HHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCC
Confidence 764 44454444443 4689999999999999999999999999998 5999999999999999999999999
Q ss_pred cccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q psy12587 318 PKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVN 382 (390)
Q Consensus 318 ~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
..|++.++.+|++++ ++++++++|.++.+.+. +++++.+.++|||+.+++++.++|+
T Consensus 279 ~~e~i~~~~~g~l~~-~~~~l~~~l~~l~~~~~-------~~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 279 VPEVVEDGVTGFLVD-SVEELAAAVARADRLDR-------AACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred chhheeCCCcEEEeC-CHHHHHHHHHHHhccHH-------HHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999999 59999999999865432 3566777799999999999999874
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=286.32 Aligned_cols=341 Identities=21% Similarity=0.214 Sum_probs=249.3
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCcccc-c--cCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cC
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHCFKE-T--KDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EK 76 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~~~~-~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (390)
.||+++++..| ++|.++||+|+++...... . ......+..............+.. ... ....++ .+
T Consensus 13 ~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~~~~~~~ 83 (364)
T cd03814 13 VNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPARVVPVPSVPLPGYPEIRLALPP----RRR-----VRRLLDAFA 83 (364)
T ss_pred ccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCCCceeecccccCcccceEecccc----hhh-----HHHHHHhcC
Confidence 49999999999 9999999999988211111 0 001111111110000000000000 010 112334 89
Q ss_pred CCEEEEcccccc-h---hHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHH
Q psy12587 77 PDLVFCDLVSIC-I---PILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQA 152 (390)
Q Consensus 77 ~Dvi~~~~~~~~-~---~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~ 152 (390)
||+||++..... . ...+..++|+++++|+..... ...............+.+++++.+|.++++|+...+.+.+
T Consensus 84 pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~ 161 (364)
T cd03814 84 PDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEY--LRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRA 161 (364)
T ss_pred CCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHH--hhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhc
Confidence 999999874322 2 222333489999999643211 1111122222333566778889999999999999985554
Q ss_pred HhccCCCCceeecCCCCCCCCCCCCCc-cchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccce
Q psy12587 153 TFRSLDHKCLDILYPSVYTEGLEKTTP-EPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHV 231 (390)
Q Consensus 153 ~~~~~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~ 231 (390)
. + ..++.++++|+|.+.+.+... ...+..+ ...+++.++++|++...||++.++++++.+.++ ++ +
T Consensus 162 ~-~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~-~~-----~ 228 (364)
T cd03814 162 R-G---FRRVRLWPRGVDTELFHPRRRDEALRARL---GPPDRPVLLYVGRLAPEKNLEALLDADLPLRRR-PP-----V 228 (364)
T ss_pred c-C---CCceeecCCCccccccCcccccHHHHHHh---CCCCCeEEEEEeccccccCHHHHHHHHHHhhhc-CC-----c
Confidence 3 1 468999999999887765432 1222222 123568899999999999999999999999887 54 9
Q ss_pred EEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEE
Q psy12587 232 KLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVI 311 (390)
Q Consensus 232 ~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi 311 (390)
+|+++|.++.. +.++ +..++|.+.|+++.+++.++|+.||++++||..|++|++++|||+||+|||
T Consensus 229 ~l~i~G~~~~~--------~~~~------~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI 294 (364)
T cd03814 229 RLVIVGDGPAR--------ARLE------ARYPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASGLPVV 294 (364)
T ss_pred eEEEEeCCchH--------HHHh------ccCCcEEEEeccCHHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCCCEE
Confidence 99999988653 3333 345789999999999999999999999999999999999999999999999
Q ss_pred EecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q psy12587 312 AVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVN 382 (390)
Q Consensus 312 ~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
+++.++..+++.++.+|+++++ |.++++++|.+++++++ .++++++++++.+ ++|+|+.+++++.++|+
T Consensus 295 ~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 295 APDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADPE-LRRRMAARARAEA-ERRSWEAFLDNLLEAYR 364 (364)
T ss_pred EcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHH-hhcCHHHHHHHHHHhhC
Confidence 9999999999999899999998 99999999999999999 9999999999998 88999999999998873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=282.74 Aligned_cols=339 Identities=22% Similarity=0.216 Sum_probs=253.2
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecC--Cccc-cccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cC
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHD--HCFK-ETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EK 76 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~--~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (390)
.||.++++..+ ++|.+.||+|+++. .... .....++.+..++.... ....+..+.... .....++ .+
T Consensus 9 ~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~------~~~~~~~~~~ 80 (359)
T cd03808 9 DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELEELEALGVKVIPIPLDRR--GINPFKDLKALL------RLYRLLRKER 80 (359)
T ss_pred chhHHHHHHHHHHHHHhcCCeeEEEecCCCcccccccCCceEEecccccc--ccChHhHHHHHH------HHHHHHHhcC
Confidence 48999999999 99999999999881 1111 23334455554432210 111111111111 1112344 89
Q ss_pred CCEEEEcccccchhH---HH-hhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHH
Q psy12587 77 PDLVFCDLVSICIPI---LQ-AKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQA 152 (390)
Q Consensus 77 ~Dvi~~~~~~~~~~~---~~-~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~ 152 (390)
||+||++........ .+ ....++++..|+........ .........++++.++.+|.++++|+...+.+.+
T Consensus 81 ~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 155 (359)
T cd03808 81 PDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSG-----GLKRRLYLLLERLALRFTDKVIFQNEDDRDLALK 155 (359)
T ss_pred CCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccc-----hhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHH
Confidence 999999975433221 22 22377777777653322111 1123344567788899999999999999999988
Q ss_pred HhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceE
Q psy12587 153 TFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVK 232 (390)
Q Consensus 153 ~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~ 232 (390)
.+...+..++.+.+++++.+.+...... ...+++.++++|++.+.||++.++++++.+.+.+++ ++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~-----~~ 221 (359)
T cd03808 156 LGIIKKKKTVLIPGSGVDLDRFSPSPEP---------IPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPN-----VR 221 (359)
T ss_pred hcCCCcCceEEecCCCCChhhcCccccc---------cCCCCcEEEEEeccccccCHHHHHHHHHHHHhcCCC-----eE
Confidence 7542223577888899988776553211 123678999999999999999999999999877765 99
Q ss_pred EEEEcCCCCCCcchhHHHHHHHH-HHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEE
Q psy12587 233 LVVAGGYDPHNIENVEYYKELGV-LVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVI 311 (390)
Q Consensus 233 l~i~G~~~~~~~~~~~y~~~~~~-~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi 311 (390)
|+++|.++.. ..... .+.+.+..++|.+.|+ .+++.++|+.||++++||..|++|++++|||+||+|||
T Consensus 222 l~i~G~~~~~--------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~Pvi 291 (359)
T cd03808 222 LLLVGDGDEE--------NPAAILEIEKLGLEGRVEFLGF--RDDVPELLAAADVFVLPSYREGLPRVLLEAMAMGRPVI 291 (359)
T ss_pred EEEEcCCCcc--------hhhHHHHHHhcCCcceEEEeec--cccHHHHHHhccEEEecCcccCcchHHHHHHHcCCCEE
Confidence 9999998765 33333 2666777789999998 45678999999999999999999999999999999999
Q ss_pred EecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHH
Q psy12587 312 AVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLN 378 (390)
Q Consensus 312 ~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (390)
+++.++..+++.++.+|+++++ |+++++++|.+++++++ .+.++++++++.+.++|+|+.+++++.
T Consensus 292 ~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 292 ATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDPE-LRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred EecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9999999999998999999998 99999999999999999 999999999999889999999998875
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=286.52 Aligned_cols=322 Identities=17% Similarity=0.141 Sum_probs=234.4
Q ss_pred CCcchhhhHhh-HhhhhcCCceeec--CCcc----ccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAH--DHCF----KETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS 74 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~--~~~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (390)
.||+++++.++ ++|.+.||+|+++ .... ......+..+..... ... ....++..+. .+++
T Consensus 11 ~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~-----~~~~ 77 (358)
T cd03812 11 RGGIETFIMNYYRNLDRSKIQFDFLVTSKEEGDYDDEIEKLGGKIYYIPA----RKK----NPLKYFKKLY-----KLIK 77 (358)
T ss_pred CccHHHHHHHHHHhcCccceEEEEEEeCCCCcchHHHHHHcCCeEEEecC----CCc----cHHHHHHHHH-----HHHh
Confidence 69999999999 9999999999888 1111 111222333333211 111 1111121111 1344
Q ss_pred -cCCCEEEEcccccchhHHH---hhcc-cEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHH
Q psy12587 75 -EKPDLVFCDLVSICIPILQ---AKQF-KVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSV 149 (390)
Q Consensus 75 -~~~Dvi~~~~~~~~~~~~~---~~~~-~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 149 (390)
.+||+||+|.......... ..+. .++++.|+......... .... ...+++.+.+.+|.++++|+...+.
T Consensus 78 ~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~i~~s~~~~~~ 151 (358)
T cd03812 78 KNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKK----KILK--YKVLRKLINRLATDYLACSEEAGKW 151 (358)
T ss_pred cCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccc----hhhH--HHHHHHHHHhcCCEEEEcCHHHHHH
Confidence 8999999998653332222 2233 44666776432211111 1100 0355677788999999999999988
Q ss_pred HHHHhccCCCCceeecCCCCCCCCCCCCCcc-chhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccc
Q psy12587 150 VQATFRSLDHKCLDILYPSVYTEGLEKTTPE-PIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMK 228 (390)
Q Consensus 150 ~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~ 228 (390)
+.+. ....++.++|||+|.+.+...... ..+...+ ...++++|+++|++.+.||++.+++++..+.++.++
T Consensus 152 ~~~~---~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~--~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~--- 223 (358)
T cd03812 152 LFGK---VKNKKFKVIPNGIDLEKFIFNEEIRKKRRELG--ILEDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPN--- 223 (358)
T ss_pred HHhC---CCcccEEEEeccCcHHHcCCCchhhhHHHHcC--CCCCCEEEEEEeccccccChHHHHHHHHHHHHhCCC---
Confidence 8765 226789999999998776543221 1122222 334778999999999999999999999999988875
Q ss_pred cceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCC
Q psy12587 229 THVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKR 308 (390)
Q Consensus 229 ~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~ 308 (390)
++++++|+++.. +.+++.++++++.++|.++|+ .+++.++|+.||++++||..|++|++++|||++|+
T Consensus 224 --~~l~ivG~g~~~--------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~ 291 (358)
T cd03812 224 --AKLLLVGDGELE--------EEIKKKVKELGLEDKVIFLGV--RNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGL 291 (358)
T ss_pred --eEEEEEeCCchH--------HHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhcCEEEecccccCCCHHHHHHHHhCC
Confidence 999999998765 788888989999999999998 45678999999999999999999999999999999
Q ss_pred CEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHH
Q psy12587 309 PVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRF 364 (390)
Q Consensus 309 pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 364 (390)
|||+|+.++..+++.+ ..+++..+ ++++++++|.+++++++ .++.+...+....
T Consensus 292 PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~~~~~-~~~~~~~~~~~~~ 346 (358)
T cd03812 292 PCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLKSEDR-RERSSESIKKKGL 346 (358)
T ss_pred CEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHHhCcc-hhhhhhhhhhccc
Confidence 9999999999999988 45555555 78999999999999999 8888877776655
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-38 Score=280.63 Aligned_cols=326 Identities=22% Similarity=0.262 Sum_probs=243.4
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCcc----ccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-c
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHCF----KETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-E 75 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 75 (390)
.||+++++..+ ++|.+.||+|+++.... ......++.+..+...........+.. .. ....+++ .
T Consensus 12 ~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----~~~~~l~~~ 82 (348)
T cd03820 12 AGGAERVLSNLANALAEKGHEVTIISLDKGEPPFYELDPKIKVIDLGDKRDSKLLARFKK----LR-----RLRKLLKNN 82 (348)
T ss_pred CCChHHHHHHHHHHHHhCCCeEEEEecCCCCCCccccCCccceeecccccccchhccccc----hH-----HHHHhhccc
Confidence 59999999999 99999999999881111 111222333333322111100000000 11 1112455 8
Q ss_pred CCCEEEEcccccc-hhHHHhhcc-cEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHH
Q psy12587 76 KPDLVFCDLVSIC-IPILQAKQF-KVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQAT 153 (390)
Q Consensus 76 ~~Dvi~~~~~~~~-~~~~~~~~~-~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 153 (390)
+||+|+++.+... +......+. |++.+.|+.......... ....++.+++.+|.+++.|+..+....
T Consensus 83 ~~d~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---------~~~~~~~~~~~~d~ii~~s~~~~~~~~-- 151 (348)
T cd03820 83 KPDVVISFLTSLLTFLASLGLKIVKLIVSEHNSPDAYKKRLR---------RLLLRRLLYRRADAVVVLTEEDRALYY-- 151 (348)
T ss_pred CCCEEEEcCchHHHHHHHHhhccccEEEecCCCccchhhhhH---------HHHHHHHHHhcCCEEEEeCHHHHHHhh--
Confidence 9999999996521 222222334 999999975432111100 011467889999999999999872221
Q ss_pred hccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEE
Q psy12587 154 FRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKL 233 (390)
Q Consensus 154 ~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l 233 (390)
.....++.++|||++...+... ...+++.++++|++.+.||++.++++++.+.+..++ ++|
T Consensus 152 --~~~~~~~~vi~~~~~~~~~~~~------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~-----~~l 212 (348)
T cd03820 152 --KKFNKNVVVIPNPLPFPPEEPS------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPD-----WKL 212 (348)
T ss_pred --ccCCCCeEEecCCcChhhcccc------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHHhcCCC-----eEE
Confidence 2236789999999988765542 123677899999999999999999999999887775 999
Q ss_pred EEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEe
Q psy12587 234 VVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAV 313 (390)
Q Consensus 234 ~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~ 313 (390)
+++|.++.. ..+++.++++++.++|.+.|. .+++.++|++||++++||..|++|++++|||+||+|||++
T Consensus 213 ~i~G~~~~~--------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~ 282 (348)
T cd03820 213 RIVGDGPER--------EALEALIKELGLEDRVILLGF--TKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVISF 282 (348)
T ss_pred EEEeCCCCH--------HHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhCCEEEeCccccccCHHHHHHHHcCCCEEEe
Confidence 999998765 778888899999999999998 6778999999999999999999999999999999999999
Q ss_pred cCC-CcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHH
Q psy12587 314 NSG-GPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLN 378 (390)
Q Consensus 314 ~~~-~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (390)
+.+ +..+++.++.+|+++++ |+++++++|.+++++++ .++++++++++.+ ++|+|+.++++|.
T Consensus 283 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~ 347 (348)
T cd03820 283 DCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEE-LRKRMGANARESA-ERFSIENIIKQWE 347 (348)
T ss_pred cCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHH-HHhCHHHHHHHhc
Confidence 975 55677777779999998 99999999999999999 9999999997665 8999999999875
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=281.78 Aligned_cols=322 Identities=19% Similarity=0.224 Sum_probs=243.5
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCccccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cCCCE
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EKPDL 79 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dv 79 (390)
.||+++++..+ ++|.++||+|+++..... .+ ...++ .+||+
T Consensus 12 ~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~-------------------------~~------------~~~~~~~~~di 54 (365)
T cd03825 12 SGGAARAAYRLHRALQAAGVDSTMLVQEKK-------------------------AL------------ISKIEIINADI 54 (365)
T ss_pred CCcHHHHHHHHHHHHHhcCCceeEEEeecc-------------------------hh------------hhChhcccCCE
Confidence 59999999999 999999999988711100 00 01233 89999
Q ss_pred EEEcccccch---hHHHhh--cccEEEEeecCCccccch------hhh---------hh-----hhcccchhhHHHHHhc
Q psy12587 80 VFCDLVSICI---PILQAK--QFKVLFYCHYPDQLLSKQ------GSF---------LK-----SIYRFPLNKLEEWTTC 134 (390)
Q Consensus 80 i~~~~~~~~~---~~~~~~--~~~~v~~~h~~~~~~~~~------~~~---------~~-----~~~~~~~~~~~~~~~~ 134 (390)
||+|...... ...... ++|+|+++|+........ ... .. ................
T Consensus 55 ih~~~~~~~~~~~~~~~~~~~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (365)
T cd03825 55 VHLHWIHGGFLSIEDLSKLLDRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWAD 134 (365)
T ss_pred EEEEccccCccCHHHHHHHHcCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhcc
Confidence 9998843222 222222 699999999754321100 000 00 0111111122222235
Q ss_pred CcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccc--cCCHHHH
Q psy12587 135 KADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYER--KKNLELA 212 (390)
Q Consensus 135 ~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~--~K~~~~l 212 (390)
.++.++++|+..++.+.+.+. .+..++.++|||+|.+.+.+......+..++ ++ .+..++++.|+... .||++.+
T Consensus 135 ~~~~~v~~s~~~~~~~~~~~~-~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~-~~-~~~~~i~~~~~~~~~~~K~~~~l 211 (365)
T cd03825 135 LNLTIVAPSRWLADCARSSSL-FKGIPIEVIPNGIDTTIFRPRDKREARKRLG-LP-ADKKIILFGAVGGTDPRKGFDEL 211 (365)
T ss_pred CCcEEEehhHHHHHHHHhccc-cCCCceEEeCCCCcccccCCCcHHHHHHHhC-CC-CCCeEEEEEecCCCccccCHHHH
Confidence 678899999999999888653 3367999999999998876655444444443 23 35566667777655 8999999
Q ss_pred HHHHHHHHhh-cccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCC-hHHHHHHHHhcceEEeC
Q psy12587 213 IYSLNSLRSR-LSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPS-DAAKISLFKFCHCIIYT 290 (390)
Q Consensus 213 l~a~~~l~~~-~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~-~~e~~~~~~~adv~v~p 290 (390)
++++..+.++ .+ +++++++|.++.. .. .++.++|.++|+++ ++++..+|+.||++++|
T Consensus 212 l~a~~~l~~~~~~-----~~~~~i~G~~~~~--------~~-------~~~~~~v~~~g~~~~~~~~~~~~~~ad~~l~p 271 (365)
T cd03825 212 IEALKRLAERWKD-----DIELVVFGASDPE--------IP-------PDLPFPVHYLGSLNDDESLALIYSAADVFVVP 271 (365)
T ss_pred HHHHHHhhhccCC-----CeEEEEeCCCchh--------hh-------ccCCCceEecCCcCCHHHHHHHHHhCCEEEec
Confidence 9999998875 34 4999999988643 11 13457899999999 78899999999999999
Q ss_pred CCCCCCCccHHhhhhcCCCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcC
Q psy12587 291 PSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFS 369 (390)
Q Consensus 291 s~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ 369 (390)
|..|++|++++|||+||+|||+++.++..|++.++.+|++++. |++++++++.+++++++ .+.++++++++.+.++||
T Consensus 272 s~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~~-~~~~~~~~~~~~~~~~~s 350 (365)
T cd03825 272 SLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADPD-EREELGEAARELAENEFD 350 (365)
T ss_pred cccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999889999998 99999999999999998 899999999999988999
Q ss_pred HHHHHHHHHHHHHhh
Q psy12587 370 FQAFSIQLNTIVNNM 384 (390)
Q Consensus 370 ~~~~~~~~~~~~~~~ 384 (390)
|+.+++++.++|+++
T Consensus 351 ~~~~~~~~~~~y~~~ 365 (365)
T cd03825 351 SRVQAKRYLSLYEEL 365 (365)
T ss_pred HHHHHHHHHHHHhhC
Confidence 999999999999864
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >KOG1111|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=264.99 Aligned_cols=345 Identities=16% Similarity=0.208 Sum_probs=264.2
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCccccc-----cCCCcceEEecccc--ccccchhhHHHHHHHHHHHHHHHHHHh
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHCFKET-----KDGTLPVKVIGDWL--PRNIFGKFYALCMYLRMIVIALYVAWY 73 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~~~~~-----~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (390)
.||.|.+++.| +.|.+.||.|.+.+..+.+. ..+++.+.+++... ....++..+.-...++.. ++
T Consensus 14 ~ggveshiy~lSq~li~lghkVvvithayg~r~girylt~glkVyylp~~v~~n~tT~ptv~~~~Pllr~i-------~l 86 (426)
T KOG1111|consen 14 TGGVESHIYALSQCLIRLGHKVVVITHAYGNRVGIRYLTNGLKVYYLPAVVGYNQTTFPTVFSDFPLLRPI-------LL 86 (426)
T ss_pred CCChhhhHHHhhcchhhcCCeEEEEeccccCccceeeecCCceEEEEeeeeeecccchhhhhccCcccchh-------hh
Confidence 69999999999 99999999988874433322 23456666664221 122233333333334432 33
Q ss_pred hcCCCEEEEcccccch-----hHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHH
Q psy12587 74 SEKPDLVFCDLVSICI-----PILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKS 148 (390)
Q Consensus 74 ~~~~Dvi~~~~~~~~~-----~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~ 148 (390)
+++..+||.|++.+.+ ..++..+-++|++-|....+........+ .+....+...|.+||+|...++
T Consensus 87 rE~I~ivhghs~fS~lahe~l~hartMGlktVfTdHSlfGfad~~si~~n--------~ll~~sL~~id~~IcVshtske 158 (426)
T KOG1111|consen 87 RERIEIVHGHSPFSYLAHEALMHARTMGLKTVFTDHSLFGFADIGSILTN--------KLLPLSLANIDRIICVSHTSKE 158 (426)
T ss_pred hhceEEEecCChHHHHHHHHHHHHHhcCceEEEeccccccccchhhhhhc--------ceeeeeecCCCcEEEEeecCCC
Confidence 3899999999975544 34455558999999975443332222222 2334557788999999987776
Q ss_pred HHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccc
Q psy12587 149 VVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMK 228 (390)
Q Consensus 149 ~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~ 228 (390)
...-+ ..+.+.++.+|||.++...|.|.+... +..+...++.++|+-.+||+|.+++++.++.+++|+
T Consensus 159 ntvlr-~~L~p~kvsvIPnAv~~~~f~P~~~~~--------~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~--- 226 (426)
T KOG1111|consen 159 NTVLR-GALAPAKVSVIPNAVVTHTFTPDAADK--------PSADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPE--- 226 (426)
T ss_pred ceEEE-eccCHhHeeeccceeeccccccCcccc--------CCCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCC---
Confidence 53322 345578999999999999998854331 444558899999999999999999999999999996
Q ss_pred cceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCC
Q psy12587 229 THVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKR 308 (390)
Q Consensus 229 ~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~ 308 (390)
++|+|+|+||.. ..+++..+++.+.++|.++|.++++++.+.|.+.|+|++||..|.|+++++||++||+
T Consensus 227 --vrfii~GDGPk~--------i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaScGL 296 (426)
T KOG1111|consen 227 --VRFIIIGDGPKR--------IDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASCGL 296 (426)
T ss_pred --eeEEEecCCccc--------chHHHHHHHhhccCceEEecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhCCC
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhhhc
Q psy12587 309 PVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKK 388 (390)
Q Consensus 309 pvi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (390)
|||++..||.+|++.++ .-.+..+++++++++++++++.-. .......+.+.+.|+|+..+++..++|.++...+
T Consensus 297 ~VVsTrVGGIpeVLP~d-~i~~~~~~~~dl~~~v~~ai~~~~----~~p~~~h~~v~~~y~w~dVa~rTekvy~r~~~t~ 371 (426)
T KOG1111|consen 297 PVVSTRVGGIPEVLPED-MITLGEPGPDDLVGAVEKAITKLR----TLPLEFHDRVKKMYSWKDVAERTEKVYDRAATTS 371 (426)
T ss_pred EEEEeecCCccccCCcc-ceeccCCChHHHHHHHHHHHHHhc----cCchhHHHHHHHhccHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999765 222333388999999888876432 2234456667789999999999999999987654
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=285.85 Aligned_cols=277 Identities=13% Similarity=0.180 Sum_probs=217.9
Q ss_pred cCCCEEEEcccccch-hHHHhh-cccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHH
Q psy12587 75 EKPDLVFCDLVSICI-PILQAK-QFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQA 152 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~-~~~~~~-~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~ 152 (390)
.++||+|++.+.... .+.... ..|.++++|+.+.......... .++...+... ....+.+|.++++|+..++.+.+
T Consensus 210 ~~~di~i~dr~~~~~~~~~~~~~~~~~v~~lH~~h~~~~~~~~~~-~~~~~~y~~~-~~~~~~~D~iI~~S~~~~~~l~~ 287 (500)
T TIGR02918 210 TKKDIIILDRSTGIGQAVLENKGPAKLGVVVHAEHFSESATNETY-ILWNNYYEYQ-FSNADYIDFFITATDIQNQILKN 287 (500)
T ss_pred CCCCEEEEcCCcccchHHHhcCCCceEEEEEChhhhcCccCcchh-HHHHHHHHHH-HhchhhCCEEEECCHHHHHHHHH
Confidence 789999998855433 333333 2899999997443222111100 0111111111 12256789999999999998887
Q ss_pred HhccC--CCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccc
Q psy12587 153 TFRSL--DHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTH 230 (390)
Q Consensus 153 ~~~~~--~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~ 230 (390)
.++.. ...++.++|||++...+.+. ....+..|+++||+.+.||++.+++|+..+.++.|+
T Consensus 288 ~~~~~~~~~~ki~viP~g~~~~~~~~~------------~~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~----- 350 (500)
T TIGR02918 288 QFKKYYNIEPRIYTIPVGSLDELQYPE------------QERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPE----- 350 (500)
T ss_pred HhhhhcCCCCcEEEEcCCCcccccCcc------------cccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCC-----
Confidence 65421 24689999999765443321 112457899999999999999999999999988886
Q ss_pred eEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCE
Q psy12587 231 VKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPV 310 (390)
Q Consensus 231 ~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pv 310 (390)
++|.|+|.|+.. +.++++++++++.++|.+.|+. ++.++|+.||++++||..||||++++||||||+||
T Consensus 351 ~~l~i~G~G~~~--------~~l~~~i~~~~l~~~V~f~G~~---~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~PV 419 (500)
T TIGR02918 351 LTFDIYGEGGEK--------QKLQKIINENQAQDYIHLKGHR---NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLGM 419 (500)
T ss_pred eEEEEEECchhH--------HHHHHHHHHcCCCCeEEEcCCC---CHHHHHHhCCEEEEcCccccccHHHHHHHHhCCCE
Confidence 999999999765 8899999999999999999976 35689999999999999999999999999999999
Q ss_pred EEecCC-CcccceecCcceeeecC-----C----HHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHH
Q psy12587 311 IAVNSG-GPKESVVDGRTGFLCES-----N----EEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTI 380 (390)
Q Consensus 311 i~~~~~-~~~e~i~~~~~g~~~~~-----~----~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
|+++.+ |.+|++.++.+|++++. | +++++++|.+++ +++ .+++|++++++.+ ++|+|+.++++|.++
T Consensus 420 I~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll-~~~-~~~~~~~~a~~~a-~~fs~~~v~~~w~~l 496 (500)
T TIGR02918 420 IGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYF-NSN-DIDAFHEYSYQIA-EGFLTANIIEKWKKL 496 (500)
T ss_pred EEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHh-ChH-HHHHHHHHHHHHH-HhcCHHHHHHHHHHH
Confidence 999986 89999999999999973 2 889999999999 566 7899999999987 899999999999999
Q ss_pred HHhh
Q psy12587 381 VNNM 384 (390)
Q Consensus 381 ~~~~ 384 (390)
++++
T Consensus 497 l~~~ 500 (500)
T TIGR02918 497 VREV 500 (500)
T ss_pred HhhC
Confidence 8764
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-37 Score=275.15 Aligned_cols=332 Identities=16% Similarity=0.166 Sum_probs=238.6
Q ss_pred CCcchhhhHhh-HhhhhcCCceeec--CCccc--cccCCCcceEEec--cccccccchhhHHHHHHHHHHHHHHHHHHhh
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAH--DHCFK--ETKDGTLPVKVIG--DWLPRNIFGKFYALCMYLRMIVIALYVAWYS 74 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~--~~~~~--~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (390)
.||+++++.++ ++|.++||+|+++ ..... ............. ................+...........+++
T Consensus 14 ~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (359)
T cd03823 14 VGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEVIGVVVYGRPIDEVLRSALPRDLFHLSDYDNPAVVAEFARLLE 93 (359)
T ss_pred ccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCcccccccceeeccccccccCCCchhhhhHHHhccCHHHHHHHHHHHH
Confidence 59999999999 9999999999988 11111 1111111111110 0001111111111111111111222234555
Q ss_pred -cCCCEEEEcccccch-hH---HHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHH
Q psy12587 75 -EKPDLVFCDLVSICI-PI---LQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSV 149 (390)
Q Consensus 75 -~~~Dvi~~~~~~~~~-~~---~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 149 (390)
.+||+||++...... .+ .+..++|+++++|+....... . .......|.++++|+...+.
T Consensus 94 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~~-----~-----------~~~~~~~d~ii~~s~~~~~~ 157 (359)
T cd03823 94 DFRPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICPR-----Q-----------GLFKKGGDAVIAPSRFLLDR 157 (359)
T ss_pred HcCCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecch-----h-----------hhhccCCCEEEEeCHHHHHH
Confidence 899999999853221 11 223348999999975322110 0 11112339999999999999
Q ss_pred HHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhccccccc
Q psy12587 150 VQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKT 229 (390)
Q Consensus 150 ~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~ 229 (390)
+.+... ...++.++|||+|...+.+... . ...++++++++|++.+.||++.++++++.+.+ +
T Consensus 158 ~~~~~~--~~~~~~vi~n~~~~~~~~~~~~------~---~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~--~----- 219 (359)
T cd03823 158 YVANGL--FAEKISVIRNGIDLDRAKRPRR------A---PPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR--G----- 219 (359)
T ss_pred HHHcCC--CccceEEecCCcChhhcccccc------C---CCCCceEEEEEecCccccCHHHHHHHHHHHHh--c-----
Confidence 988632 1478999999999887765332 0 22477899999999999999999999999877 3
Q ss_pred ceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCC-CCCCCccHHhhhhcCC
Q psy12587 230 HVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPS-NEHFGIVPIEAMFCKR 308 (390)
Q Consensus 230 ~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~-~e~~~~~~~Ea~a~G~ 308 (390)
+++|+++|.++.. ....... +..++|.++|+++.+++.++|+.||++++||. .|++|++++|||+||+
T Consensus 220 ~~~l~i~G~~~~~--------~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~ 288 (359)
T cd03823 220 DIELVIVGNGLEL--------EEESYEL---EGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGV 288 (359)
T ss_pred CcEEEEEcCchhh--------hHHHHhh---cCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCCC
Confidence 4999999998754 2222222 45689999999999999999999999999998 7999999999999999
Q ss_pred CEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHh
Q psy12587 309 PVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNN 383 (390)
Q Consensus 309 pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
|||+++.++..|++.++.+|+++++ |++++++++.+++++++ .++.+++++++.... +.+++++.++|++
T Consensus 289 Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 359 (359)
T cd03823 289 PVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPD-LLERLRAGIEPPRSI----EDQAEEYLKLYRS 359 (359)
T ss_pred CEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhChH-HHHHHHHhHHHhhhH----HHHHHHHHHHhhC
Confidence 9999999999999999989999998 99999999999999998 999999988777632 8899999988863
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-37 Score=276.68 Aligned_cols=272 Identities=18% Similarity=0.218 Sum_probs=222.4
Q ss_pred cCCCEEEEcccccchhH-HHhhc----ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHH
Q psy12587 75 EKPDLVFCDLVSICIPI-LQAKQ----FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSV 149 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~-~~~~~----~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 149 (390)
.++|++|++........ ..+.+ .++|.+.|+.+.+..... .....+.+.+++.+|.++++|+..++.
T Consensus 126 ~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~~--------~~~~~~~~~~~~~~d~ii~~S~~~~~~ 197 (407)
T cd04946 126 GQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRYP--------SGYIPLRRYLLSSLDAVFPCSEQGRNY 197 (407)
T ss_pred cCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhcc--------ccchHHHHHHHhcCCEEEECCHHHHHH
Confidence 56778888764332222 22222 348999998654321111 111234456688999999999999999
Q ss_pred HHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhccccccc
Q psy12587 150 VQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKT 229 (390)
Q Consensus 150 ~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~ 229 (390)
+.+.++.. .+++.++++|++...+.... ..++.+.++++|++.+.||++.+++++..+.+..|+ .
T Consensus 198 l~~~~~~~-~~ki~vi~~gv~~~~~~~~~-----------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~---~ 262 (407)
T cd04946 198 LQKRYPAY-KEKIKVSYLGVSDPGIISKP-----------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPS---I 262 (407)
T ss_pred HHHHCCCc-cccEEEEECCcccccccCCC-----------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCC---c
Confidence 99988754 67899999999876554321 223678899999999999999999999999988753 2
Q ss_pred ceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHh--cceEEeCCCCCCCCccHHhhhhcC
Q psy12587 230 HVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKF--CHCIIYTPSNEHFGIVPIEAMFCK 307 (390)
Q Consensus 230 ~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~--adv~v~ps~~e~~~~~~~Ea~a~G 307 (390)
++.++++|+|+.. +.+++++++.+..++|.|+|+++++++.++|+. +|++++||..||+|++++|||+||
T Consensus 263 ~l~~~iiG~g~~~--------~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G 334 (407)
T cd04946 263 KIKWTHIGGGPLE--------DTLKELAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFG 334 (407)
T ss_pred eEEEEEEeCchHH--------HHHHHHHHhcCCCceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcC
Confidence 3778889998765 788888888888889999999999999999986 778999999999999999999999
Q ss_pred CCEEEecCCCcccceecCcceeeecC--CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHH
Q psy12587 308 RPVIAVNSGGPKESVVDGRTGFLCES--NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLN 378 (390)
Q Consensus 308 ~pvi~~~~~~~~e~i~~~~~g~~~~~--~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (390)
+|||+|+.||.+|++.++.+|+++++ |+++++++|.++++|++ .+.+|+++|++.+.++|+|+...+++.
T Consensus 335 ~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~~~-~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 335 IPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDNEE-EYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred CCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99999999999999999999999875 79999999999999998 999999999999999999999988875
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=272.67 Aligned_cols=318 Identities=11% Similarity=0.065 Sum_probs=221.0
Q ss_pred CcchhhhHhh-HhhhhcCC-ceeec---C-Ccc-ccccCCCcceEEeccccccccchhhHHHHHHHHH----HHHHHHHH
Q psy12587 3 GATARLTITA-TAWGATGP-RTTAH---D-HCF-KETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRM----IVIALYVA 71 (390)
Q Consensus 3 GG~~~~~~~l-~~L~~~G~-~V~~~---~-~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 71 (390)
+|.+..+..+ ..|.++|| +|+++ + ... ......++.+++.+.............+..++.. +....+..
T Consensus 15 ~g~~~r~~~~~~~l~~~~~~~v~vi~~~~~~~~~~~~~~~~v~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (371)
T PLN02275 15 FGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPALLNHPSIHIHLMVQPRLLQRLPRVLYALALLLKVAIQFLMLLWFL 94 (371)
T ss_pred CCCCHHHHHHHHHHHhcCCceEEEEEecCCCCCHHHhcCCcEEEEECCCcccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 4666666677 88888776 69888 1 111 2223345777776431111112222221112221 11111111
Q ss_pred Hhh-cCCCEEEEcccccch------hHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccH
Q psy12587 72 WYS-EKPDLVFCDLVSICI------PILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSE 144 (390)
Q Consensus 72 ~~~-~~~Dvi~~~~~~~~~------~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~ 144 (390)
..+ .+||+||+|+++... .+.+..+.|+|+++|+.+................+..++++++++.+|.++++|+
T Consensus 95 ~~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~ 174 (371)
T PLN02275 95 CVKIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTK 174 (371)
T ss_pred HhhCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCH
Confidence 245 899999998754311 1223445899999997532111111111223334567889999999999999999
Q ss_pred hHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHh---
Q psy12587 145 FTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRS--- 221 (390)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~--- 221 (390)
.+++.+.+.++ . ++.++||+. .+.+.+.... ... ..+...+++++|++.+.||++.+++|+..+..
T Consensus 175 ~~~~~l~~~~g-~---~i~vi~n~~-~~~f~~~~~~---~~~---~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~ 243 (371)
T PLN02275 175 AMQHELDQNWG-I---RATVLYDQP-PEFFRPASLE---IRL---RPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVA 243 (371)
T ss_pred HHHHHHHHhcC-C---CeEEECCCC-HHHcCcCCch---hcc---cCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhh
Confidence 99999987544 2 288999984 3445443211 111 22345677899999999999999999998742
Q ss_pred --------------hcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEec-CCChHHHHHHHHhcce
Q psy12587 222 --------------RLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLT-SPSDAAKISLFKFCHC 286 (390)
Q Consensus 222 --------------~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g-~~~~~e~~~~~~~adv 286 (390)
..| +++|+|+|+|+.. ++++++++++++++ +.+.+ +++.+++..+|+.||+
T Consensus 244 ~~~~~~~~~~~~~~~~~-----~i~l~ivG~G~~~--------~~l~~~~~~~~l~~-v~~~~~~~~~~~~~~~l~~aDv 309 (371)
T PLN02275 244 ARLNESDSASGKQSLYP-----RLLFIITGKGPQK--------AMYEEKISRLNLRH-VAFRTMWLEAEDYPLLLGSADL 309 (371)
T ss_pred hccccccccccccccCC-----CeEEEEEeCCCCH--------HHHHHHHHHcCCCc-eEEEcCCCCHHHHHHHHHhCCE
Confidence 234 4999999999876 89999999999965 77765 6999999999999999
Q ss_pred EEeCCC---CCCCCccHHhhhhcCCCEEEecCCCcccceecCcceeeecCCHHHHHHHHHHHh
Q psy12587 287 IIYTPS---NEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIV 346 (390)
Q Consensus 287 ~v~ps~---~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~ 346 (390)
+++|+. .|++|++++||||||+|||+++.++.+|++.++.+|++++ ++++++++|.+++
T Consensus 310 ~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~-~~~~la~~i~~l~ 371 (371)
T PLN02275 310 GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS-SSSELADQLLELL 371 (371)
T ss_pred EEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC-CHHHHHHHHHHhC
Confidence 997632 4889999999999999999999999999999999999998 8999999998874
|
|
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=271.97 Aligned_cols=329 Identities=24% Similarity=0.278 Sum_probs=243.7
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCccccccCCCcce----EEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-c
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHCFKETKDGTLPV----KVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-E 75 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~~~~~~~~~~~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 75 (390)
.||+++++..+ ++|.+.||+|+++.............. ..... ........ ..+.. ....+++ .
T Consensus 11 ~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~-----~~~~~~~~~ 80 (353)
T cd03811 11 GGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPSNVKLIPVRV-LKLKSLRD----LLAIL-----RLRRLLRKE 80 (353)
T ss_pred CCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccccchhhhceee-eecccccc----hhHHH-----HHHHHHHhc
Confidence 59999999999 999999999998811111111000000 00000 00000000 01111 1112444 8
Q ss_pred CCCEEEEccc-ccchhHHHhh--cccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHH
Q psy12587 76 KPDLVFCDLV-SICIPILQAK--QFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQA 152 (390)
Q Consensus 76 ~~Dvi~~~~~-~~~~~~~~~~--~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~ 152 (390)
+||+|+++.. ...+...... ++|+++++|+............. .+++..++.+|.++++|+..++.+.+
T Consensus 81 ~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~d~ii~~s~~~~~~~~~ 152 (353)
T cd03811 81 KPDVVISHLTTTPNVLALLAARLGTKLIVWEHNSLSLELKRKLRLL--------LLIRKLYRRADKIVAVSEGVKEDLLK 152 (353)
T ss_pred CCCEEEEcCccchhHHHHHHhhcCCceEEEEcCcchhhhccchhHH--------HHHHhhccccceEEEeccchhhhHHH
Confidence 9999999987 3333222222 38999999976443221111100 45678899999999999999999999
Q ss_pred HhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceE
Q psy12587 153 TFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVK 232 (390)
Q Consensus 153 ~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~ 232 (390)
.++. +..++.++|||++...+........ ... ..+++++++++|++.+.||++.++++++.+.++.++ ++
T Consensus 153 ~~~~-~~~~~~vi~~~~~~~~~~~~~~~~~--~~~--~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~-----~~ 222 (353)
T cd03811 153 LLGI-PPDKIEVIYNPIDIEEIRALAEEPL--ELG--IPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPD-----AR 222 (353)
T ss_pred hhcC-CccccEEecCCcChhhcCcccchhh--hcC--CCCCceEEEEEecchhhcChHHHHHHHHHhhhcCCC-----ce
Confidence 8763 2578999999999887765432211 111 234778999999999999999999999999987664 99
Q ss_pred EEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEE
Q psy12587 233 LVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIA 312 (390)
Q Consensus 233 l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~ 312 (390)
|+++|.++.. +.+++.++++++.++|.+.|++++ +.++++.||++++||..|++|++++|||++|+|||+
T Consensus 223 l~i~G~~~~~--------~~~~~~~~~~~~~~~v~~~g~~~~--~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~ 292 (353)
T cd03811 223 LVILGDGPLR--------EELEALAKELGLADRVHFLGFQSN--PYPYLKAADLFVLSSRYEGFPNVLLEAMALGTPVVA 292 (353)
T ss_pred EEEEcCCccH--------HHHHHHHHhcCCCccEEEecccCC--HHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCCEEE
Confidence 9999998765 778889999999999999999764 579999999999999999999999999999999999
Q ss_pred ecCCCcccceecCcceeeecC-CHHHH---HHHHHHHhcCChhHHHHHHHHHHHHHhhhcC
Q psy12587 313 VNSGGPKESVVDGRTGFLCES-NEEAF---AKAMKKIVDNDGNIIQQFSQFGFNRFNEKFS 369 (390)
Q Consensus 313 ~~~~~~~e~i~~~~~g~~~~~-~~~~l---~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ 369 (390)
++.++..|++.++.+|+++++ +.+++ ++.+..+.++++ .+.++++++++.+.++|+
T Consensus 293 ~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 293 TDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLDPE-LRERLAAAARERVAREYS 352 (353)
T ss_pred cCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCChH-HHHHHHHHHHHHHHHHhc
Confidence 999999999999999999998 88888 778888888888 889999888888877775
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=279.36 Aligned_cols=284 Identities=14% Similarity=0.123 Sum_probs=214.2
Q ss_pred HHhh-cCCCEEEEcccccchhHH-HhhcccEEEEeecCCccccchh----hh-hhhhcc---cchhhHHHHHhcCcceEE
Q psy12587 71 AWYS-EKPDLVFCDLVSICIPIL-QAKQFKVLFYCHYPDQLLSKQG----SF-LKSIYR---FPLNKLEEWTTCKADKIV 140 (390)
Q Consensus 71 ~~~~-~~~Dvi~~~~~~~~~~~~-~~~~~~~v~~~h~~~~~~~~~~----~~-~~~~~~---~~~~~~~~~~~~~ad~ii 140 (390)
.+++ .++|+||+++...+..+. +..++|+|++.|+.+...+... .. .+..++ ..+..+++.+++++|.++
T Consensus 98 ~~~~~~~~D~v~~~~~~~~~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi 177 (397)
T TIGR03087 98 ALLAAEPVDAIVVFSSAMAQYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGRLLLAYERAIAARFDAAT 177 (397)
T ss_pred HHHhhCCCCEEEEeccccceeccccccCCCeEeehhhHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhhCCeEE
Confidence 3555 899999999864443332 2345899999997542111110 01 111111 223467888999999999
Q ss_pred EccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHH----HHH
Q psy12587 141 VNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAI----YSL 216 (390)
Q Consensus 141 ~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll----~a~ 216 (390)
++|+..++.+.+.++. ...++.++|||+|.+.|.+..... .. ++ .+..+++|+|++.+.||++.++ +++
T Consensus 178 ~~S~~~~~~l~~~~~~-~~~~v~vipngvd~~~f~~~~~~~--~~---~~-~~~~~ilf~G~l~~~k~~~~l~~~~~~~~ 250 (397)
T TIGR03087 178 FVSRAEAELFRRLAPE-AAGRITAFPNGVDADFFSPDRDYP--NP---YP-PGKRVLVFTGAMDYWPNIDAVVWFAERVF 250 (397)
T ss_pred EcCHHHHHHHHHhCCC-CCCCeEEeecccchhhcCCCcccc--CC---CC-CCCcEEEEEEecCCccCHHHHHHHHHHHH
Confidence 9999999999876442 256899999999998876542210 10 11 2456889999999999999987 456
Q ss_pred HHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCC-CCC
Q psy12587 217 NSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPS-NEH 295 (390)
Q Consensus 217 ~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~-~e~ 295 (390)
..+.+..|+ ++|+|+|+++. +++++ ++..++|.|+|++++ +..+|+.||++++||. .||
T Consensus 251 ~~l~~~~p~-----~~l~ivG~g~~---------~~~~~----l~~~~~V~~~G~v~~--~~~~~~~adv~v~Ps~~~eG 310 (397)
T TIGR03087 251 PAVRARRPA-----AEFYIVGAKPS---------PAVRA----LAALPGVTVTGSVAD--VRPYLAHAAVAVAPLRIARG 310 (397)
T ss_pred HHHHHHCCC-----cEEEEECCCCh---------HHHHH----hccCCCeEEeeecCC--HHHHHHhCCEEEecccccCC
Confidence 666666775 99999999864 33333 333578999999984 5899999999999997 599
Q ss_pred CCccHHhhhhcCCCEEEecCCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHH
Q psy12587 296 FGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSI 375 (390)
Q Consensus 296 ~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (390)
+|++++|||+||+|||+|+.++. .+...+++|++++.|+++++++|.++++|++ .+++|++++++.+.++|||+..++
T Consensus 311 ~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~~~~~~la~ai~~ll~~~~-~~~~~~~~ar~~v~~~fsw~~~~~ 388 (397)
T TIGR03087 311 IQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVAADPADFAAAILALLANPA-EREELGQAARRRVLQHYHWPRNLA 388 (397)
T ss_pred cccHHHHHHHcCCCEEecCcccc-cccccCCcceEeCCCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHhCCHHHHHH
Confidence 99999999999999999997532 3333445788875699999999999999998 999999999999989999999999
Q ss_pred HHHHHHHh
Q psy12587 376 QLNTIVNN 383 (390)
Q Consensus 376 ~~~~~~~~ 383 (390)
++.++++.
T Consensus 389 ~~~~~l~~ 396 (397)
T TIGR03087 389 RLDALLEQ 396 (397)
T ss_pred HHHHHhcC
Confidence 99998853
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=265.42 Aligned_cols=269 Identities=15% Similarity=0.118 Sum_probs=195.2
Q ss_pred Hhh-cCCCEEEEcccccchh---HHHhhc--ccEEEEeecCCccccc-hh-hhhhhhcccchhhHHHHHhc-CcceEEEc
Q psy12587 72 WYS-EKPDLVFCDLVSICIP---ILQAKQ--FKVLFYCHYPDQLLSK-QG-SFLKSIYRFPLNKLEEWTTC-KADKIVVN 142 (390)
Q Consensus 72 ~~~-~~~Dvi~~~~~~~~~~---~~~~~~--~~~v~~~h~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~-~ad~ii~~ 142 (390)
.++ .+|||||++++..... ..++.+ .++|.++|.....+.. .. .....+ +.+.+.+++.+ .+|.++++
T Consensus 111 ~l~~~~pDVIHv~tP~~LG~~~~g~~~~~k~~~vV~tyHT~y~~Y~~~~~~g~~~~~---l~~~~~~~~~r~~~d~vi~p 187 (462)
T PLN02846 111 TIPDEEADIAVLEEPEHLTWYHHGKRWKTKFRLVIGIVHTNYLEYVKREKNGRVKAF---LLKYINSWVVDIYCHKVIRL 187 (462)
T ss_pred HHHhcCCCEEEEcCchhhhhHHHHHHHHhcCCcEEEEECCChHHHHHHhccchHHHH---HHHHHHHHHHHHhcCEEEcc
Confidence 444 9999999999654333 233332 5577788972211111 00 011111 12222233322 38999999
Q ss_pred cHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCC--CeEEEEeecccccCCHHHHHHHHHHHH
Q psy12587 143 SEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKE--DIVFLSINRYERKKNLELAIYSLNSLR 220 (390)
Q Consensus 143 s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~i~~~g~~~~~K~~~~ll~a~~~l~ 220 (390)
|....+ +.+ .+...++|+|.+.|.+.... .++... + ++ .+.++|+||+.++||++.++++++.+.
T Consensus 188 S~~~~~-l~~--------~~i~~v~GVd~~~f~~~~~~-~~~~~~--~-~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~ 254 (462)
T PLN02846 188 SAATQD-YPR--------SIICNVHGVNPKFLEIGKLK-LEQQKN--G-EQAFTKGAYYIGKMVWSKGYKELLKLLHKHQ 254 (462)
T ss_pred CHHHHH-Hhh--------CEEecCceechhhcCCCccc-HhhhcC--C-CCCcceEEEEEecCcccCCHHHHHHHHHHHH
Confidence 986654 332 23344589999988765432 222221 2 23 346899999999999999999999998
Q ss_pred hhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccH
Q psy12587 221 SRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVP 300 (390)
Q Consensus 221 ~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~ 300 (390)
+..++ ++|+|+|+|+.. +++++.++++++...+ |.|..+.+ ++++.+|+||+||..|++|+++
T Consensus 255 ~~~~~-----~~l~ivGdGp~~--------~~L~~~a~~l~l~~~v-f~G~~~~~---~~~~~~DvFv~pS~~Et~g~v~ 317 (462)
T PLN02846 255 KELSG-----LEVDLYGSGEDS--------DEVKAAAEKLELDVRV-YPGRDHAD---PLFHDYKVFLNPSTTDVVCTTT 317 (462)
T ss_pred hhCCC-----eEEEEECCCccH--------HHHHHHHHhcCCcEEE-ECCCCCHH---HHHHhCCEEEECCCcccchHHH
Confidence 87775 999999999987 8999999999886444 77865444 6999999999999999999999
Q ss_pred HhhhhcCCCEEEecCCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHH
Q psy12587 301 IEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTI 380 (390)
Q Consensus 301 ~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
+||||||+|||+++.++ .+++.++.+|+.++ |.+++++++..+++++. ..++..+ .+.|||+..++++.+.
T Consensus 318 lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~-~~~~~a~ai~~~l~~~~---~~~~~~a----~~~~SWe~~~~~l~~~ 388 (462)
T PLN02846 318 AEALAMGKIVVCANHPS-NEFFKQFPNCRTYD-DGKGFVRATLKALAEEP---APLTDAQ----RHELSWEAATERFLRV 388 (462)
T ss_pred HHHHHcCCcEEEecCCC-cceeecCCceEecC-CHHHHHHHHHHHHccCc---hhHHHHH----HHhCCHHHHHHHHHHH
Confidence 99999999999999987 59999999999997 89999999999998653 1222222 2599999999999999
Q ss_pred HH
Q psy12587 381 VN 382 (390)
Q Consensus 381 ~~ 382 (390)
++
T Consensus 389 ~~ 390 (462)
T PLN02846 389 AD 390 (462)
T ss_pred hc
Confidence 86
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=270.16 Aligned_cols=257 Identities=27% Similarity=0.411 Sum_probs=200.1
Q ss_pred cCCCEEEEcccccchhHHHhhcccEEEEeecCCccccch-------hhh-h---hhhcccchhhHHHHHhcCcceEEEcc
Q psy12587 75 EKPDLVFCDLVSICIPILQAKQFKVLFYCHYPDQLLSKQ-------GSF-L---KSIYRFPLNKLEEWTTCKADKIVVNS 143 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~-------~~~-~---~~~~~~~~~~~~~~~~~~ad~ii~~s 143 (390)
.++|+|++++......+....+.|.++++|.+..+.... ... . .......+..+++..++++|.++++|
T Consensus 82 ~~~D~v~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S 161 (351)
T cd03804 82 SGYDLVISSSHAVAKGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYFIANS 161 (351)
T ss_pred cCCCEEEEcCcHHhccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEEEECC
Confidence 899999998764444333334489999999753221110 000 0 01122334556677789999999999
Q ss_pred HhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhc
Q psy12587 144 EFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRL 223 (390)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~ 223 (390)
+.+++.+.+.++ .+..+++||+|.+.+.+.. .....++++|++.+.||++.+++|++.+.
T Consensus 162 ~~~~~~~~~~~~----~~~~vi~~~~d~~~~~~~~-------------~~~~~il~~G~~~~~K~~~~li~a~~~~~--- 221 (351)
T cd03804 162 RFVARRIKKYYG----RDATVIYPPVDTDRFTPAE-------------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG--- 221 (351)
T ss_pred HHHHHHHHHHhC----CCcEEECCCCCHhhcCcCC-------------CCCCEEEEEEcCccccChHHHHHHHHHCC---
Confidence 999999988654 4678999999988776432 13345799999999999999999998762
Q ss_pred ccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhh
Q psy12587 224 SDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEA 303 (390)
Q Consensus 224 ~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea 303 (390)
++|+|+|+++.. +++++ +..++|.|+|+++++++.++|+.||++++||. |++|++++||
T Consensus 222 -------~~l~ivG~g~~~--------~~l~~-----~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Ea 280 (351)
T cd03804 222 -------KRLVVIGDGPEL--------DRLRA-----KAGPNVTFLGRVSDEELRDLYARARAFLFPAE-EDFGIVPVEA 280 (351)
T ss_pred -------CcEEEEECChhH--------HHHHh-----hcCCCEEEecCCCHHHHHHHHHhCCEEEECCc-CCCCchHHHH
Confidence 579999998653 44444 34689999999999999999999999999999 9999999999
Q ss_pred hhcCCCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHH
Q psy12587 304 MFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQL 377 (390)
Q Consensus 304 ~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (390)
|+||+|||+++.++..|++.++.+|+++++ |+++++++|.++++++++.++.+ ++.+ ++|+|+.+.+++
T Consensus 281 ma~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~~~~~~~----~~~~-~~~~~~~~~~~~ 350 (351)
T cd03804 281 MASGTPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNEDFDPQAI----RAHA-ERFSESRFREKI 350 (351)
T ss_pred HHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcccCHHHH----HHHH-HhcCHHHHHHHh
Confidence 999999999999999999999999999988 99999999999999883134444 4444 579999888765
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=252.85 Aligned_cols=237 Identities=16% Similarity=0.154 Sum_probs=187.0
Q ss_pred ccEEEEeecCCccccchhhhhhhhcccchhhHHHHH-hcCcceEEEccHhHHHHHHHHhccCC-CCceeecCCCCCCCCC
Q psy12587 97 FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWT-TCKADKIVVNSEFTKSVVQATFRSLD-HKCLDILYPSVYTEGL 174 (390)
Q Consensus 97 ~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ad~ii~~s~~~~~~~~~~~~~~~-~~~~~vi~~~~~~~~~ 174 (390)
+|+++++|+.+ .+...++.++ .+++|.++++|+.+++.+.+.. .+ .+++.+||||+|.+.|
T Consensus 70 ~~~v~e~~~~~---------------~l~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~g--~~~~~~i~vIpNGVd~~~f 132 (331)
T PHA01630 70 KNIVFEVADTD---------------AISHTALYFFRNQPVDEIVVPSQWSKNAFYTSG--LKIPQPIYVIPHNLNPRMF 132 (331)
T ss_pred CceEEEEEeec---------------hhhHHHHHHHhhccCCEEEECCHHHHHHHHHcC--CCCCCCEEEECCCCCHHHc
Confidence 79999999722 1223444555 6889999999999999988752 22 4689999999998877
Q ss_pred CCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHH
Q psy12587 175 EKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELG 254 (390)
Q Consensus 175 ~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~ 254 (390)
.+... ....++++++.|++.+.||++.+++|++.+.++.++ ++++++|++... ..+
T Consensus 133 ~~~~~----------~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~-----~~llivG~~~~~--------~~l- 188 (331)
T PHA01630 133 EYKPK----------EKPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYD-----FYFLIKSSNMLD--------PRL- 188 (331)
T ss_pred CCCcc----------ccCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCC-----EEEEEEeCcccc--------hhh-
Confidence 64321 112556777888999999999999999999887775 999999965432 211
Q ss_pred HHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceecCcceeee---
Q psy12587 255 VLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLC--- 331 (390)
Q Consensus 255 ~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~--- 331 (390)
.++. .+.+.++.+++..+|+.||++++||..|+||++++||||||+|||+|+.+|.+|++.++.+|+++
T Consensus 189 -----~~~~---~~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~ 260 (331)
T PHA01630 189 -----FGLN---GVKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSG 260 (331)
T ss_pred -----cccc---ceeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeec
Confidence 1221 13567999999999999999999999999999999999999999999999999999998776665
Q ss_pred -----------------cCCHHHHHHHHHHHhcCC--hhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHh
Q psy12587 332 -----------------ESNEEAFAKAMKKIVDND--GNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNN 383 (390)
Q Consensus 332 -----------------~~~~~~l~~~i~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
++|.+++++++.+++.++ + .++++..++...+.++|||+.+++++.++|++
T Consensus 261 ~~~~~~~~~~~~~G~~v~~~~~~~~~~ii~~l~~~~~~-~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 261 RKPKLWYTNPIHVGYFLDPDIEDAYQKLLEALANWTPE-KKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred ccccccccCCcccccccCCCHHHHHHHHHHHHhCCCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 347788999999999875 5 44555455555556999999999999999975
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=260.17 Aligned_cols=271 Identities=21% Similarity=0.274 Sum_probs=217.3
Q ss_pred cCCCEEEEcccccchh-HHHhhc-ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHH
Q psy12587 75 EKPDLVFCDLVSICIP-ILQAKQ-FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQA 152 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~-~~~~~~-~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~ 152 (390)
.++|+++++....... +..... .+.++++|+......... .....+...... ...++++|.+++.|+..++.+.+
T Consensus 98 ~~~diii~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~d~ii~~s~~~~~~l~~ 174 (372)
T cd04949 98 TKPDVFILDRPTLDGQALLNMKKAAKVVVVLHSNHVSDNNDP--VHSLINNFYEYV-FENLDKVDGVIVATEQQKQDLQK 174 (372)
T ss_pred CCCCEEEECCccccchhHHhccCCceEEEEEChHHhCCcccc--cccccchhhHHH-HhChhhCCEEEEccHHHHHHHHH
Confidence 7899999998654443 333333 678889996443221110 011111111111 12357899999999999999998
Q ss_pred HhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceE
Q psy12587 153 TFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVK 232 (390)
Q Consensus 153 ~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~ 232 (390)
.++. ..++.++|||++...+.+... ....+..++++||+.+.||++.+++++..+.++.|+ ++
T Consensus 175 ~~~~--~~~v~~ip~g~~~~~~~~~~~----------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~-----~~ 237 (372)
T cd04949 175 QFGN--YNPIYTIPVGSIDPLKLPAQF----------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPD-----AT 237 (372)
T ss_pred HhCC--CCceEEEcccccChhhcccch----------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCC-----cE
Confidence 8763 245899999998876654310 112556889999999999999999999999998886 99
Q ss_pred EEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEE
Q psy12587 233 LVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIA 312 (390)
Q Consensus 233 l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~ 312 (390)
|+|+|.++.. ..++..+++++++++|.+.|+.+ ++.++|+.||++++||..||+|++++|||++|+|||+
T Consensus 238 l~i~G~g~~~--------~~~~~~~~~~~~~~~v~~~g~~~--~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~ 307 (372)
T cd04949 238 LDIYGYGDEE--------EKLKELIEELGLEDYVFLKGYTR--DLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVIS 307 (372)
T ss_pred EEEEEeCchH--------HHHHHHHHHcCCcceEEEcCCCC--CHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEE
Confidence 9999998765 77888888999999999999654 4689999999999999999999999999999999999
Q ss_pred ecCC-CcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHH
Q psy12587 313 VNSG-GPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQL 377 (390)
Q Consensus 313 ~~~~-~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (390)
++.+ |..+++.++.+|+++++ |+++++++|.+++++++ .++++++++++.+ ++|+|+.++++|
T Consensus 308 ~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~~-~~~~~~~~a~~~~-~~~s~~~~~~~w 372 (372)
T cd04949 308 YDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIELLNDPK-LLQKFSEAAYENA-ERYSEENVWEKW 372 (372)
T ss_pred ecCCCCcHHHcccCCCceEeCCCcHHHHHHHHHHHHcCHH-HHHHHHHHHHHHH-HHhhHHHHHhcC
Confidence 9987 88999999999999999 99999999999999998 9999999999995 899999998865
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >KOG0853|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=246.53 Aligned_cols=381 Identities=39% Similarity=0.630 Sum_probs=297.5
Q ss_pred CCcchhhhHhh-Hhhhh---------cCCceeec-C-----------CccccccCCCcceEEeccccccccc--hhhHHH
Q psy12587 2 LGATARLTITA-TAWGA---------TGPRTTAH-D-----------HCFKETKDGTLPVKVIGDWLPRNIF--GKFYAL 57 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~---------~G~~V~~~-~-----------~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~ 57 (390)
+||.++-...- -.+.. .||+|.++ . .+..+...+...+.....+.|+... ......
T Consensus 46 ~gg~er~~v~~~~~l~s~~~~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~~~~~~~~~ 125 (495)
T KOG0853|consen 46 IGGAERLVVDAAVHLLSGQDVLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWLPRAMGQFLEQVAG 125 (495)
T ss_pred cCchHHHhHHHHHHHHhcccccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeecCcccchhhhhhhc
Confidence 68999988886 77777 99998877 1 1233344444677777777776652 222222
Q ss_pred HHHHHHHHHHHHHHHhh--cCCCEEEEcccccchhHHHhhc-----ccEEEEeecCCccccchhhhhhhhcccchhhHHH
Q psy12587 58 CMYLRMIVIALYVAWYS--EKPDLVFCDLVSICIPILQAKQ-----FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEE 130 (390)
Q Consensus 58 ~~~~~~~~~~~~~~~~~--~~~Dvi~~~~~~~~~~~~~~~~-----~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (390)
..+.+.+...... +.+ .+.|+|+......+.++.+..+ .++.+++|.++..........+.+++..+.+++.
T Consensus 126 ~~~~~il~~~~~~-~~k~~~~~d~~i~d~~~~~~~l~~~~~~p~~~~~i~~~~h~~~~lla~r~g~~~~l~~~~l~~~e~ 204 (495)
T KOG0853|consen 126 CAYLRILRIPFGI-LFKWAEKVDPIIEDFVSACVPLLKQLSGPDVIIKIYFYCHFPDSLLAKRLGVLKVLYRHALDKIEE 204 (495)
T ss_pred cceeEEEEeccch-hhhhhhhhceeecchHHHHHHHHHHhcCCcccceeEEeccchHHHhccccCccceeehhhhhhhhh
Confidence 2222222221111 122 6789999888766777666655 7888999998888777777888899999999999
Q ss_pred HHhcCcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCC-------ccchhhhcCCCCCCCCeEEEEeecc
Q psy12587 131 WTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTT-------PEPIENVLNPLPGKEDIVFLSINRY 203 (390)
Q Consensus 131 ~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~i~~~g~~ 203 (390)
.....++.+++.|...+..+...+..+...++.+.+.++|.+.+.+.. ....+...+ -.+....+..+.++
T Consensus 205 e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~--v~~~d~~~~siN~~ 282 (495)
T KOG0853|consen 205 ETTGLAWKILVNSYFTKRQFKATFVSLSNSDITSTYPEIDGSWFTYGQYESHLELRLPVRLYRG--VSGIDRFFPSINRF 282 (495)
T ss_pred hhhhccceEecchhhhhhhhhhhhhhcCCCCcceeeccccchhccccccccchhcccccceeee--ecccceEeeeeeec
Confidence 999999999999999999999988877666789999999877655311 111111111 12236677888999
Q ss_pred cccCCHHHHHHHHHHHHhhcccccccceEEEEEc--CCCCCCcchhHHHHHHHHHHHHcCC-CCcEEEecCCChHHHHHH
Q psy12587 204 ERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAG--GYDPHNIENVEYYKELGVLVKKLKL-SDNVLFLTSPSDAAKISL 280 (390)
Q Consensus 204 ~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G--~~~~~~~~~~~y~~~~~~~~~~~~l-~~~v~~~g~~~~~e~~~~ 280 (390)
.+.|+++.+++++..+....++......++.++| +.+....++..|++++.++++++++ .+.|.|+...++.+...+
T Consensus 283 ~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~yrl 362 (495)
T KOG0853|consen 283 EPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAKYRL 362 (495)
T ss_pred CCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHHHHH
Confidence 9999999999999999888854334468899999 5566677888999999999999998 477778788888887788
Q ss_pred HHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceecCcceeeecCCHH---HHHHHHHHHhcCChhHHHHHH
Q psy12587 281 FKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEE---AFAKAMKKIVDNDGNIIQQFS 357 (390)
Q Consensus 281 ~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~~~~---~l~~~i~~l~~~~~~~~~~~~ 357 (390)
++.+.+.+.....|.||++++|||+||+|||+++.||..|++.++.+|++++++.+ .+++++.++.+|++ .+.+|+
T Consensus 363 ~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp~~e~~~~~a~~~~kl~~~p~-l~~~~~ 441 (495)
T KOG0853|consen 363 AADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDPGQEAVAELADALLKLRRDPE-LWARMG 441 (495)
T ss_pred HHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCCchHHHHHHHHHHHHHhcCHH-HHHHHH
Confidence 88888776655569999999999999999999999999999999999999998555 69999999999999 999999
Q ss_pred HHHHHHHhhhcCHHHHHHHHHHHHHhhhh
Q psy12587 358 QFGFNRFNEKFSFQAFSIQLNTIVNNMLD 386 (390)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (390)
+++++.+.+.|+|..+.+++.++..+...
T Consensus 442 ~~G~~rV~e~fs~~~~~~ri~~~~~~~~~ 470 (495)
T KOG0853|consen 442 KNGLKRVKEMFSWQHYSERIASVLGKYLQ 470 (495)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhHhcCC
Confidence 99999998889999999999998876543
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=248.53 Aligned_cols=267 Identities=15% Similarity=0.094 Sum_probs=194.1
Q ss_pred cCCCEEEEccccc-chh--HHHhhc--ccEEEEeecCCccccc-h-hhhhhhhcccchhhHHHHHhcC-cceEEEccHhH
Q psy12587 75 EKPDLVFCDLVSI-CIP--ILQAKQ--FKVLFYCHYPDQLLSK-Q-GSFLKSIYRFPLNKLEEWTTCK-ADKIVVNSEFT 146 (390)
Q Consensus 75 ~~~Dvi~~~~~~~-~~~--~~~~~~--~~~v~~~h~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~-ad~ii~~s~~~ 146 (390)
++|||||++++.. ++. +.++++ .|+|.++|.....+.. . ......+ +.+.+..++.+. ||.++++|..+
T Consensus 433 f~PDVVHLatP~~LGw~~~Glr~ArKl~PVVasyHTny~eYl~~y~~g~L~~~---llk~l~~~v~r~hcD~VIaPS~at 509 (794)
T PLN02501 433 KDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAF---FVKHINNWVTRAYCHKVLRLSAAT 509 (794)
T ss_pred cCCCEEEECCchhhccHHHHHHHHHHcCCeEEEEeCCcHHHHhHhcchhHHHH---HHHHHHHHHHHhhCCEEEcCCHHH
Confidence 8999999999532 333 222222 4899899964332111 1 1112221 111222222221 89999999777
Q ss_pred HHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccc
Q psy12587 147 KSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDE 226 (390)
Q Consensus 147 ~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~ 226 (390)
.+ + + ...+. ..||||.+.|.+.........++ ++. ....++|+||+.+.||++.+++|++.+.++.++
T Consensus 510 q~-L----~---~~vI~-nVnGVDte~F~P~~r~~~~r~lg-i~~-~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pn- 577 (794)
T PLN02501 510 QD-L----P---KSVIC-NVHGVNPKFLKIGEKVAEERELG-QQA-FSKGAYFLGKMVWAKGYRELIDLLAKHKNELDG- 577 (794)
T ss_pred HH-h----c---cccee-ecccccccccCCcchhHHHHhcC-Ccc-ccCceEEEEcccccCCHHHHHHHHHHHHhhCCC-
Confidence 63 2 1 12222 22799999998765433333332 111 234578999999999999999999999887774
Q ss_pred cccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhc
Q psy12587 227 MKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFC 306 (390)
Q Consensus 227 ~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~ 306 (390)
++|+|+|+|+.. ++++++++++++ +|.|+|..++. ..+|+.+|++++||..|+||++++|||||
T Consensus 578 ----vrLvIVGDGP~r--------eeLe~la~eLgL--~V~FLG~~dd~--~~lyasaDVFVlPS~sEgFGlVlLEAMA~ 641 (794)
T PLN02501 578 ----FNLDVFGNGEDA--------HEVQRAAKRLDL--NLNFLKGRDHA--DDSLHGYKVFINPSISDVLCTATAEALAM 641 (794)
T ss_pred ----eEEEEEcCCccH--------HHHHHHHHHcCC--EEEecCCCCCH--HHHHHhCCEEEECCCcccchHHHHHHHHc
Confidence 999999999886 889999999887 48999988766 47999999999999999999999999999
Q ss_pred CCCEEEecCCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHH
Q psy12587 307 KRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIV 381 (390)
Q Consensus 307 G~pvi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
|+|||+++.++. +++.++.+|+++. |+++++++|.++++++. .+..+.. ...+||+..++++++.-
T Consensus 642 GlPVVATd~pG~-e~V~~g~nGll~~-D~EafAeAI~~LLsd~~-~rl~~~a------~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 642 GKFVVCADHPSN-EFFRSFPNCLTYK-TSEDFVAKVKEALANEP-QPLTPEQ------RYNLSWEAATQRFMEYS 707 (794)
T ss_pred CCCEEEecCCCC-ceEeecCCeEecC-CHHHHHHHHHHHHhCch-hhhHHHH------HhhCCHHHHHHHHHHhh
Confidence 999999999875 4577777888765 99999999999999887 5433321 24899999999998864
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-30 Score=224.09 Aligned_cols=241 Identities=16% Similarity=0.193 Sum_probs=181.4
Q ss_pred ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCC
Q psy12587 97 FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEK 176 (390)
Q Consensus 97 ~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~ 176 (390)
++++.++|+.... ....++.. +.+.+|++|+.+++.+.+. +.+ .. .++++|+|.+.|.+
T Consensus 71 ~~~~tt~~g~~~~----------------~~y~~~m~-~~~~vIavS~~t~~~L~~~--G~~-~~-i~I~~GVD~~~f~p 129 (335)
T PHA01633 71 KYFYTTCDGIPNI----------------EIVNKYLL-QDVKFIPNSKFSAENLQEV--GLQ-VD-LPVFHGINFKIVEN 129 (335)
T ss_pred CceEEeeCCcCch----------------HHHHHHHh-cCCEEEeCCHHHHHHHHHh--CCC-Cc-eeeeCCCChhhcCc
Confidence 7888888875321 12223333 4568999999999999875 332 23 35789999988876
Q ss_pred CCc--cchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHH
Q psy12587 177 TTP--EPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELG 254 (390)
Q Consensus 177 ~~~--~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~ 254 (390)
... ...++.++ ....+.++++++||+.++||++.+++|++.+.++.++ ...+++++++|. ..
T Consensus 130 ~~~~~~~~r~~~~-~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~-~~~~i~l~ivG~------------~~-- 193 (335)
T PHA01633 130 AEKLVPQLKQKLD-KDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPD-IAKKIHFFVISH------------KQ-- 193 (335)
T ss_pred cchhhHHHHHHhC-cCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCC-ccccEEEEEEcH------------HH--
Confidence 432 23444432 1113567899999999999999999999999887653 001257777773 22
Q ss_pred HHHHHcCCCCcEEEe---cCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceec-------
Q psy12587 255 VLVKKLKLSDNVLFL---TSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVD------- 324 (390)
Q Consensus 255 ~~~~~~~l~~~v~~~---g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~------- 324 (390)
.++++++++|.|. |+++.+++.++|+.||++++||..|+||++++|||+||+|||+++.++++|+..+
T Consensus 194 --~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~ 271 (335)
T PHA01633 194 --FTQLEVPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIK 271 (335)
T ss_pred --HHHcCCCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeC
Confidence 2456678899998 5668899999999999999999999999999999999999999999998886441
Q ss_pred -----------CcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHH
Q psy12587 325 -----------GRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNT 379 (390)
Q Consensus 325 -----------~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
...|+.++. |+++++++|.++++..+ +...+.++++.+ ++|+|+.++++|++
T Consensus 272 ~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~--~~~~~~~~~~~a-~~f~~~~~~~~~~~ 335 (335)
T PHA01633 272 SSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD--REERSMKLKELA-KKYDIRNLYTRFLE 335 (335)
T ss_pred CCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC--hhhhhHHHHHHH-HhcCHHHHHHHhhC
Confidence 234678888 99999999999966543 333466777776 89999999999864
|
|
| >KOG1387|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-28 Score=202.40 Aligned_cols=370 Identities=21% Similarity=0.276 Sum_probs=271.8
Q ss_pred CCcchhhhHhh-HhhhhcCCc-e-eec-CCc---------------cccccCCCcceEEec--cccccccchhhHHHHHH
Q psy12587 2 LGATARLTITA-TAWGATGPR-T-TAH-DHC---------------FKETKDGTLPVKVIG--DWLPRNIFGKFYALCMY 60 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~-V-~~~-~~~---------------~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~ 60 (390)
.||.||++..- +.+.+.--+ + .++ ++. ..+....++...++. .++....++.+..+.+.
T Consensus 56 GGGGErVLW~Avr~~q~k~~n~~~viYsGD~n~t~~~IL~k~k~~F~idlDs~nI~Fi~Lk~R~lVea~~~~hfTllgQa 135 (465)
T KOG1387|consen 56 GGGGERVLWKAVRITQRKFPNNVIVIYSGDFNVTPENILNKVKNKFDIDLDSDNIFFIYLKLRYLVEASTWKHFTLLGQA 135 (465)
T ss_pred CCCcceehhHHHHHHHHhCCCceEEEEeCCCCCCHHHHHHHHHHhcCceecccceEEEEEEeeeeeecccccceehHHHH
Confidence 58999998888 887765333 3 333 221 011222333333332 33444555666666666
Q ss_pred HHHHHHHHHHHHhhcCCCEEEEcc-cccchhHHH-hhcccEEEEeecCCccccchhh-----------hhhhhcccchhh
Q psy12587 61 LRMIVIALYVAWYSEKPDLVFCDL-VSICIPILQ-AKQFKVLFYCHYPDQLLSKQGS-----------FLKSIYRFPLNK 127 (390)
Q Consensus 61 ~~~~~~~~~~~~~~~~~Dvi~~~~-~~~~~~~~~-~~~~~~v~~~h~~~~~~~~~~~-----------~~~~~~~~~~~~ 127 (390)
+..+...+- ++++..||+.+-+- .++.+++.+ +.++|++.++|.|-....-... +-+-.+.+++..
T Consensus 136 igsmIl~~E-ai~r~~Pdi~IDtMGY~fs~p~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~ 214 (465)
T KOG1387|consen 136 IGSMILAFE-AIIRFPPDIFIDTMGYPFSYPIFRRLRRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFAL 214 (465)
T ss_pred HHHHHHHHH-HHHhCCchheEecCCCcchhHHHHHHccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHH
Confidence 655544333 36669999988655 556677666 6669999999976543221111 112233444556
Q ss_pred HHHHHhcCcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccC
Q psy12587 128 LEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKK 207 (390)
Q Consensus 128 ~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K 207 (390)
+...+-..||.+++.|.++.+.+.+.++ ..++++++++++.+.+...... ..++.+.++++|.++|+|
T Consensus 215 lY~~~G~~ad~vm~NssWT~nHI~qiW~---~~~~~iVyPPC~~e~lks~~~t---------e~~r~~~ll~l~Q~RPEK 282 (465)
T KOG1387|consen 215 LYQSAGSKADIVMTNSSWTNNHIKQIWQ---SNTCSIVYPPCSTEDLKSKFGT---------EGERENQLLSLAQFRPEK 282 (465)
T ss_pred HHHhccccceEEEecchhhHHHHHHHhh---ccceeEEcCCCCHHHHHHHhcc---------cCCcceEEEEEeecCccc
Confidence 6777888999999999999999999987 4689999999988755433211 124678899999999999
Q ss_pred CHHHHHHHHHHHHhhccc-ccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcce
Q psy12587 208 NLELAIYSLNSLRSRLSD-EMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHC 286 (390)
Q Consensus 208 ~~~~ll~a~~~l~~~~~~-~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv 286 (390)
++. +++.......+.|. ....+++|.++|+.... ++.++.+.++.+++++.++++|.|.-.+|.+++..++..|.+
T Consensus 283 nH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRne--eD~ervk~Lkd~a~~L~i~~~v~F~~N~Py~~lv~lL~~a~i 359 (465)
T KOG1387|consen 283 NHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRNE--EDEERVKSLKDLAEELKIPKHVQFEKNVPYEKLVELLGKATI 359 (465)
T ss_pred ccH-HHHHHHHHHhcCchhhccCCceEEEEeccCCh--hhHHHHHHHHHHHHhcCCccceEEEecCCHHHHHHHhcccee
Confidence 999 55555444344332 23457999999987654 667888999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCCccHHhhhhcCCCEEEecCCCc-ccceec---CcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHH
Q psy12587 287 IIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGP-KESVVD---GRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFN 362 (390)
Q Consensus 287 ~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~-~e~i~~---~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~ 362 (390)
.++.-..|.||+++.||||+|+-+|+.+.||. -+++.+ ..+|++.+ +.++.++++.+++....+.+..|+++|+.
T Consensus 360 Gvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~ 438 (465)
T KOG1387|consen 360 GVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP-TDEEYAEAILKIVKLNYDERNMMRRNARK 438 (465)
T ss_pred ehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC-ChHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999888664 455543 33789887 89999999999988665368899999998
Q ss_pred HHhhhcCHHHHHHHHHHHHHhhhhhcC
Q psy12587 363 RFNEKFSFQAFSIQLNTIVNNMLDKKT 389 (390)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (390)
.+ .+|+-..+-+.|...+.+++.+..
T Consensus 439 s~-~RFsE~~F~kd~~~~i~kll~e~~ 464 (465)
T KOG1387|consen 439 SL-ARFGELKFDKDWENPICKLLEEEE 464 (465)
T ss_pred HH-HHhhHHHHHHhHhHHHHHhhcccc
Confidence 87 899999999999999999887643
|
|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=231.10 Aligned_cols=291 Identities=13% Similarity=0.123 Sum_probs=207.6
Q ss_pred cCCCEEEEcccccchhHHHhhc----ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHH
Q psy12587 75 EKPDLVFCDLVSICIPILQAKQ----FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVV 150 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~~~~~----~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 150 (390)
...|+|++|++...+....+.+ .|+++++|-+.+.... +..+ .....+.+. +-.+|.|.+.+......+
T Consensus 130 ~~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP~~e~----~~~l--p~~~~ll~~-~l~~D~igF~t~~~~~~F 202 (460)
T cd03788 130 RPGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEI----FRCL--PWREELLRG-LLGADLIGFQTERYARNF 202 (460)
T ss_pred CCCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCCChHH----HhhC--CChHHHHHH-HhcCCEEEECCHHHHHHH
Confidence 5679999999765443333322 7899999976432111 1100 001122222 334899999997665555
Q ss_pred HHHh----------------ccCCCCceeecCCCCCCCCCCCCCcc-ch----hhhcCCCCCCCCeEEEEeecccccCCH
Q psy12587 151 QATF----------------RSLDHKCLDILYPSVYTEGLEKTTPE-PI----ENVLNPLPGKEDIVFLSINRYERKKNL 209 (390)
Q Consensus 151 ~~~~----------------~~~~~~~~~vi~~~~~~~~~~~~~~~-~~----~~~~~~l~~~~~~~i~~~g~~~~~K~~ 209 (390)
.+.. .+. ..++.++|||+|.+.|.+.... .. ++..+ ...+.++|+++||+.+.||+
T Consensus 203 l~~~~~~l~~~~~~~~~i~~~g~-~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~--~~~~~~~il~vgRl~~~Kgi 279 (460)
T cd03788 203 LSCCSRLLGLEVTDDGGVEYGGR-RVRVGAFPIGIDPDAFRKLAASPEVQERAAELRE--RLGGRKLIVGVDRLDYSKGI 279 (460)
T ss_pred HHHHHHHcCCcccCCceEEECCE-EEEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHH--hcCCCEEEEEecCccccCCH
Confidence 5421 111 2468999999999887653221 11 11111 12367889999999999999
Q ss_pred HHHHHHHHHHHhhcccccccceEEEEEcCCCC-CCcchhHHHHHHHHHHHHcCC-------CCcEEEecCCChHHHHHHH
Q psy12587 210 ELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDP-HNIENVEYYKELGVLVKKLKL-------SDNVLFLTSPSDAAKISLF 281 (390)
Q Consensus 210 ~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~-~~~~~~~y~~~~~~~~~~~~l-------~~~v~~~g~~~~~e~~~~~ 281 (390)
+.+++|++.+.+++|+ ...++.|+++|.+.. ..+....+.+++++++.+.+. .+.+.+.|.++.+++..+|
T Consensus 280 ~~ll~A~~~ll~~~p~-~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y 358 (460)
T cd03788 280 PERLLAFERLLERYPE-WRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALY 358 (460)
T ss_pred HHHHHHHHHHHHhChh-hcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHH
Confidence 9999999999887773 111367888876532 122334555666666655432 2333456889999999999
Q ss_pred HhcceEEeCCCCCCCCccHHhhhhcCCC----EEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHH
Q psy12587 282 KFCHCIIYTPSNEHFGIVPIEAMFCKRP----VIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQF 356 (390)
Q Consensus 282 ~~adv~v~ps~~e~~~~~~~Ea~a~G~p----vi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~ 356 (390)
+.||++++||..||+|++++|||+||+| ||+|+.+|..+. +.+|+++++ |+++++++|.++++++.++++.+
T Consensus 359 ~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~ 435 (460)
T cd03788 359 RAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLVNPYDIDEVADAIHRALTMPLEERRER 435 (460)
T ss_pred HhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHH
Confidence 9999999999999999999999999999 999998888776 467999999 99999999999999886478888
Q ss_pred HHHHHHHHhhhcCHHHHHHHHHHH
Q psy12587 357 SQFGFNRFNEKFSFQAFSIQLNTI 380 (390)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
.+++++.+ ++|+++.+++++++-
T Consensus 436 ~~~~~~~v-~~~~~~~w~~~~l~~ 458 (460)
T cd03788 436 HRKLREYV-RTHDVQAWANSFLDD 458 (460)
T ss_pred HHHHHHHH-HhCCHHHHHHHHHHh
Confidence 88888887 789999999998764
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=226.31 Aligned_cols=323 Identities=11% Similarity=0.008 Sum_probs=222.6
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCc----cccccCCCcceEEeccccc--cccchhhHHHHHHHHHHHHHHHHHHhh
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHC----FKETKDGTLPVKVIGDWLP--RNIFGKFYALCMYLRMIVIALYVAWYS 74 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~----~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (390)
.||.++++.+| ++|.++||+|++++.. .......++.+..++.... ......+.....++..+.. ...+++
T Consensus 11 ~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~ik 88 (357)
T PRK00726 11 TGGHVFPALALAEELKKRGWEVLYLGTARGMEARLVPKAGIEFHFIPSGGLRRKGSLANLKAPFKLLKGVLQ--ARKILK 88 (357)
T ss_pred chHhhhHHHHHHHHHHhCCCEEEEEECCCchhhhccccCCCcEEEEeccCcCCCChHHHHHHHHHHHHHHHH--HHHHHH
Confidence 58899999999 9999999999888221 1122224666766643211 1111222222222222111 113456
Q ss_pred -cCCCEEEEcccccchh---HHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHH
Q psy12587 75 -EKPDLVFCDLVSICIP---ILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVV 150 (390)
Q Consensus 75 -~~~Dvi~~~~~~~~~~---~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 150 (390)
.+||+||+|.+...+. +.+..++|+|++.|+... ....+++++.+|.+++.++...
T Consensus 89 ~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~-----------------~~~~r~~~~~~d~ii~~~~~~~--- 148 (357)
T PRK00726 89 RFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQNAVP-----------------GLANKLLARFAKKVATAFPGAF--- 148 (357)
T ss_pred hcCCCEEEECCCcchhHHHHHHHHcCCCEEEEcCCCCc-----------------cHHHHHHHHHhchheECchhhh---
Confidence 8999999998543333 233445899887664211 1334666778999999887442
Q ss_pred HHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHH-HHHHHHHhhccccccc
Q psy12587 151 QATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAI-YSLNSLRSRLSDEMKT 229 (390)
Q Consensus 151 ~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll-~a~~~l~~~~~~~~~~ 229 (390)
.+ .+..+++++|||++.+.+.+.. .+..++ ++ .+.++++++|+....++...++ +|++++.+. +
T Consensus 149 ~~----~~~~~i~vi~n~v~~~~~~~~~---~~~~~~-~~-~~~~~i~~~gg~~~~~~~~~~l~~a~~~~~~~-~----- 213 (357)
T PRK00726 149 PE----FFKPKAVVTGNPVREEILALAA---PPARLA-GR-EGKPTLLVVGGSQGARVLNEAVPEALALLPEA-L----- 213 (357)
T ss_pred hc----cCCCCEEEECCCCChHhhcccc---hhhhcc-CC-CCCeEEEEECCcHhHHHHHHHHHHHHHHhhhC-c-----
Confidence 11 3368999999999987654322 111221 12 2566778888887777765555 888888653 2
Q ss_pred ceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCC
Q psy12587 230 HVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRP 309 (390)
Q Consensus 230 ~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~p 309 (390)
..++++|.++. +.+.+..+ +++. |.+.|++ +++.++|+.||++++++ .+.+++|||++|+|
T Consensus 214 -~~~~~~G~g~~---------~~~~~~~~-~~~~--v~~~g~~--~~~~~~~~~~d~~i~~~----g~~~~~Ea~~~g~P 274 (357)
T PRK00726 214 -QVIHQTGKGDL---------EEVRAAYA-AGIN--AEVVPFI--DDMAAAYAAADLVICRA----GASTVAELAAAGLP 274 (357)
T ss_pred -EEEEEcCCCcH---------HHHHHHhh-cCCc--EEEeehH--hhHHHHHHhCCEEEECC----CHHHHHHHHHhCCC
Confidence 45778898864 55555555 7663 9999998 45689999999999866 26889999999999
Q ss_pred EEEecCCC--------cccceecCcceeeecC-C--HHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHH
Q psy12587 310 VIAVNSGG--------PKESVVDGRTGFLCES-N--EEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLN 378 (390)
Q Consensus 310 vi~~~~~~--------~~e~i~~~~~g~~~~~-~--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (390)
+|+++.++ ..+.+.+..+|+++++ | +++++++|.+++++++ .+++|++++++.+ +.++.+.+++.+.
T Consensus 275 vv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~ 352 (357)
T PRK00726 275 AILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPE-RLEAMAEAARALG-KPDAAERLADLIE 352 (357)
T ss_pred EEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHH-HHHHHHHHHHhcC-CcCHHHHHHHHHH
Confidence 99987642 1255667778999987 6 9999999999999988 9999999999886 8899999999988
Q ss_pred HHHH
Q psy12587 379 TIVN 382 (390)
Q Consensus 379 ~~~~ 382 (390)
++++
T Consensus 353 ~~~~ 356 (357)
T PRK00726 353 ELAR 356 (357)
T ss_pred HHhh
Confidence 8765
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-29 Score=222.10 Aligned_cols=305 Identities=15% Similarity=0.151 Sum_probs=199.6
Q ss_pred cCCCEEEEcccccchhHHHhhc----ccEEEEeecCCccccchhhhhhhhc--------------cc--chhhHHHHHhc
Q psy12587 75 EKPDLVFCDLVSICIPILQAKQ----FKVLFYCHYPDQLLSKQGSFLKSIY--------------RF--PLNKLEEWTTC 134 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~~~~~----~~~v~~~h~~~~~~~~~~~~~~~~~--------------~~--~~~~~~~~~~~ 134 (390)
.++||+|+|.|..+..+..+++ +|+|+|.|.......-.... ..++ +. -...+|+.+..
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~-~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGN-VDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCC-cccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 5899999999988777666652 88999999654322101110 1111 11 12247899999
Q ss_pred CcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCcc------------c-----hhhhcCCCCCCCCeEE
Q psy12587 135 KADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPE------------P-----IENVLNPLPGKEDIVF 197 (390)
Q Consensus 135 ~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~------------~-----~~~~~~~l~~~~~~~i 197 (390)
.||.++++|+.++..+...|+.. +++ |+|||+|...|...... . ++..++ ++. ++.++
T Consensus 226 ~Ad~fttVS~it~~E~~~Ll~~~-pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~-~~~-d~tli 300 (590)
T cd03793 226 CAHVFTTVSEITAYEAEHLLKRK-PDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYD-FDL-DKTLY 300 (590)
T ss_pred hCCEEEECChHHHHHHHHHhCCC-CCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcC-CCC-CCeEE
Confidence 99999999999999999998743 334 99999999998765410 1 122222 222 44555
Q ss_pred EE-eecccc-cCCHHHHHHHHHHHHhhcccc--cccceEEEEEcCCCCC----CcchhHHHHHHHHH-------------
Q psy12587 198 LS-INRYER-KKNLELAIYSLNSLRSRLSDE--MKTHVKLVVAGGYDPH----NIENVEYYKELGVL------------- 256 (390)
Q Consensus 198 ~~-~g~~~~-~K~~~~ll~a~~~l~~~~~~~--~~~~~~l~i~G~~~~~----~~~~~~y~~~~~~~------------- 256 (390)
+| +||+.. +||++.+|+|+.++....... ...=+-|+++-..... ...++...+++++.
T Consensus 301 ~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~ 380 (590)
T cd03793 301 FFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLF 380 (590)
T ss_pred EEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhh
Confidence 55 799987 999999999999886632210 0011344544443211 00111211222221
Q ss_pred ------------------------------------------------------HHHcCCC----Cc--EEEecC-CC--
Q psy12587 257 ------------------------------------------------------VKKLKLS----DN--VLFLTS-PS-- 273 (390)
Q Consensus 257 ------------------------------------------------------~~~~~l~----~~--v~~~g~-~~-- 273 (390)
++++++. ++ |.|++. ++
T Consensus 381 ~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~ 460 (590)
T cd03793 381 EAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSST 460 (590)
T ss_pred hHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCC
Confidence 1222221 22 334332 21
Q ss_pred ----hHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCc----ccceecC-cceeeec-------C-CHH
Q psy12587 274 ----DAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGP----KESVVDG-RTGFLCE-------S-NEE 336 (390)
Q Consensus 274 ----~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~----~e~i~~~-~~g~~~~-------~-~~~ 336 (390)
..+..++++.||++++||.+|+||++++|||+||+|||+|+.+|+ .|.+.++ ..|+.+. + +.+
T Consensus 461 ~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~ 540 (590)
T cd03793 461 NPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQ 540 (590)
T ss_pred CCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHH
Confidence 234568999999999999999999999999999999999999988 4555444 3566665 3 678
Q ss_pred HHHHHHHHHhcCChhHHHHHHHHHH-HHHhhhcCHHHHHHHHHHHHHhhhhh
Q psy12587 337 AFAKAMKKIVDNDGNIIQQFSQFGF-NRFNEKFSFQAFSIQLNTIVNNMLDK 387 (390)
Q Consensus 337 ~l~~~i~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (390)
+++++|.++++. + .++++..++. +...+.|+|+..++.|.+.++.++++
T Consensus 541 ~La~~m~~~~~~-~-~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~~ 590 (590)
T cd03793 541 QLTQYMYEFCQL-S-RRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALSR 590 (590)
T ss_pred HHHHHHHHHhCC-c-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhC
Confidence 888999998854 4 5565555543 23348999999999999999887753
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-28 Score=222.97 Aligned_cols=291 Identities=11% Similarity=0.125 Sum_probs=206.7
Q ss_pred cCCCEEEEcccccchhHHHhhc----ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHH
Q psy12587 75 EKPDLVFCDLVSICIPILQAKQ----FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVV 150 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~~~~~----~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 150 (390)
..-|+|++|+....+....++. .++.++.|-|.+.... ++.+- .+.-.-..+-.||.|-+.+...++.+
T Consensus 126 ~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~~e~----f~~lp---~r~~il~gll~~dligF~t~~~~~~F 198 (456)
T TIGR02400 126 QPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEI----YRTLP---WRRELLEGLLAYDLVGFQTYDDARNF 198 (456)
T ss_pred CCCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCChHH----HhhCC---cHHHHHHHHhcCCEEEECCHHHHHHH
Confidence 4558999999876554443333 6888889965432111 11110 11111233557899999999888877
Q ss_pred HHHhcc--------------CCCCceeecCCCCCCCCCCCCCcc--------chhhhcCCCCCCCCeEEEEeecccccCC
Q psy12587 151 QATFRS--------------LDHKCLDILYPSVYTEGLEKTTPE--------PIENVLNPLPGKEDIVFLSINRYERKKN 208 (390)
Q Consensus 151 ~~~~~~--------------~~~~~~~vi~~~~~~~~~~~~~~~--------~~~~~~~~l~~~~~~~i~~~g~~~~~K~ 208 (390)
.+.... -...++.++|||+|++.|.+.... .+++.+ .++++|+++||+.+.||
T Consensus 199 l~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-----~~~~vIl~VgRLd~~KG 273 (456)
T TIGR02400 199 LSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESL-----KGRKLIIGVDRLDYSKG 273 (456)
T ss_pred HHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHc-----CCCeEEEEccccccccC
Confidence 763220 013568899999999988653211 123333 26678999999999999
Q ss_pred HHHHHHHHHHHHhhcccccccceEEEEEcCCC-CCCcchhHHHHHHHHHHHHc-------CCCCcEEEecCCChHHHHHH
Q psy12587 209 LELAIYSLNSLRSRLSDEMKTHVKLVVAGGYD-PHNIENVEYYKELGVLVKKL-------KLSDNVLFLTSPSDAAKISL 280 (390)
Q Consensus 209 ~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~-~~~~~~~~y~~~~~~~~~~~-------~l~~~v~~~g~~~~~e~~~~ 280 (390)
++.+++|++.+.+++|+ ...++.|+++|... ........+..++++++.+. +..+.+.+.|.++.+++..+
T Consensus 274 i~~ll~A~~~ll~~~p~-~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~al 352 (456)
T TIGR02400 274 LPERLLAFERFLEEHPE-WRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMAL 352 (456)
T ss_pred HHHHHHHHHHHHHhCcc-ccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHH
Confidence 99999999999888774 11235677775322 11111122333344333221 11233445678999999999
Q ss_pred HHhcceEEeCCCCCCCCccHHhhhhcCCC----EEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHH
Q psy12587 281 FKFCHCIIYTPSNEHFGIVPIEAMFCKRP----VIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQ 355 (390)
Q Consensus 281 ~~~adv~v~ps~~e~~~~~~~Ea~a~G~p----vi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~ 355 (390)
|+.||++++||..||||++++||||||+| +|+|+.+|..+.+. +|+++++ |+++++++|.++++++.+++++
T Consensus 353 y~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllVnP~d~~~lA~aI~~aL~~~~~er~~ 429 (456)
T TIGR02400 353 YRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLVNPYDIDGMADAIARALTMPLEEREE 429 (456)
T ss_pred HHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEECCCCHHHHHHHHHHHHcCCHHHHHH
Confidence 99999999999999999999999999999 99999988888773 7899999 9999999999999987658888
Q ss_pred HHHHHHHHHhhhcCHHHHHHHHHHHHH
Q psy12587 356 FSQFGFNRFNEKFSFQAFSIQLNTIVN 382 (390)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
+.+.+++.+ .+||+..+++++++-+.
T Consensus 430 r~~~~~~~v-~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 430 RHRAMMDKL-RKNDVQRWREDFLSDLN 455 (456)
T ss_pred HHHHHHHHH-hhCCHHHHHHHHHHHhh
Confidence 888899997 67999999999887553
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-28 Score=221.53 Aligned_cols=317 Identities=12% Similarity=0.041 Sum_probs=212.6
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecC--C-cccc-ccCCCcceEEecccc--ccccchhhHHHHHHHHHHHHHHHHHHhh
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHD--H-CFKE-TKDGTLPVKVIGDWL--PRNIFGKFYALCMYLRMIVIALYVAWYS 74 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~--~-~~~~-~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (390)
.||.++++..+ ++|.++||+|+++. . ...+ ....++.+..++... ....+..+.....++.... ....+++
T Consensus 9 ~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~ 86 (350)
T cd03785 9 TGGHIFPALALAEELRERGAEVLFLGTKRGLEARLVPKAGIPLHTIPVGGLRRKGSLKKLKAPFKLLKGVL--QARKILK 86 (350)
T ss_pred chhhhhHHHHHHHHHHhCCCEEEEEECCCcchhhcccccCCceEEEEecCcCCCChHHHHHHHHHHHHHHH--HHHHHHH
Confidence 58999999999 99999999998881 1 1111 122345666653211 1111122222222122111 1123455
Q ss_pred -cCCCEEEEcccccchh---HHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHH
Q psy12587 75 -EKPDLVFCDLVSICIP---ILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVV 150 (390)
Q Consensus 75 -~~~Dvi~~~~~~~~~~---~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 150 (390)
.+||+||+++....++ +++..++|++++.|+... ....+++++.+|.++++|+...+.
T Consensus 87 ~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~-----------------~~~~~~~~~~~~~vi~~s~~~~~~- 148 (350)
T cd03785 87 KFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVP-----------------GLANRLLARFADRVALSFPETAKY- 148 (350)
T ss_pred hcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCc-----------------cHHHHHHHHhhCEEEEcchhhhhc-
Confidence 8999999998544433 233444888876554211 123455667799999999988765
Q ss_pred HHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHH-HHHHHHHHHhhccccccc
Q psy12587 151 QATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLEL-AIYSLNSLRSRLSDEMKT 229 (390)
Q Consensus 151 ~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~-ll~a~~~l~~~~~~~~~~ 229 (390)
++ ..++.+++||++.+.+..... ++.++ +++ +.+++++.|+....|+... +++++..+.+.
T Consensus 149 ---~~---~~~~~~i~n~v~~~~~~~~~~---~~~~~-~~~-~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~------- 210 (350)
T cd03785 149 ---FP---KDKAVVTGNPVREEILALDRE---RARLG-LRP-GKPTLLVFGGSQGARAINEAVPEALAELLRK------- 210 (350)
T ss_pred ---CC---CCcEEEECCCCchHHhhhhhh---HHhcC-CCC-CCeEEEEECCcHhHHHHHHHHHHHHHHhhcc-------
Confidence 22 578999999999876654221 33332 233 5566677776666666654 45888888632
Q ss_pred ceE-EEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCC
Q psy12587 230 HVK-LVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKR 308 (390)
Q Consensus 230 ~~~-l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~ 308 (390)
++. +.++|.+. . +++++.++++ .++|.+.|++ +++.++|+.||++++++ .+++++|||++|+
T Consensus 211 ~~~~~~i~G~g~-~--------~~l~~~~~~~--~~~v~~~g~~--~~~~~~l~~ad~~v~~s----g~~t~~Eam~~G~ 273 (350)
T cd03785 211 RLQVIHQTGKGD-L--------EEVKKAYEEL--GVNYEVFPFI--DDMAAAYAAADLVISRA----GASTVAELAALGL 273 (350)
T ss_pred CeEEEEEcCCcc-H--------HHHHHHHhcc--CCCeEEeehh--hhHHHHHHhcCEEEECC----CHhHHHHHHHhCC
Confidence 255 45778773 2 6777777766 4789999998 56689999999999865 2688999999999
Q ss_pred CEEEecCCC--------cccceecCcceeeecC---CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHH
Q psy12587 309 PVIAVNSGG--------PKESVVDGRTGFLCES---NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSI 375 (390)
Q Consensus 309 pvi~~~~~~--------~~e~i~~~~~g~~~~~---~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (390)
|+|+++.++ ..+.+.+..+|++++. |+++++++|.+++++++ .+++|++++++.+ +.+..+++++
T Consensus 274 Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~~~~~~~-~~~~~~~i~~ 349 (350)
T cd03785 274 PAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPE-RLKAMAEAARSLA-RPDAAERIAD 349 (350)
T ss_pred CEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHH-HHHHHHHHHHhcC-CCCHHHHHHh
Confidence 999987643 2355666778999874 79999999999999888 9999999999887 5677666653
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-28 Score=217.54 Aligned_cols=265 Identities=14% Similarity=0.064 Sum_probs=183.4
Q ss_pred cCCCEEEEcccccchhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHHh
Q psy12587 75 EKPDLVFCDLVSICIPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATF 154 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~ 154 (390)
.+..+++++.+.+...+....+.++|+++++........ ... ....++.++++||.|+++|+...+.+.+.
T Consensus 101 ~~~~i~~~~~P~~~~~~~~~~~~~~Vyd~~D~~~~~~~~---~~~-----~~~~e~~~~~~ad~vi~~S~~l~~~~~~~- 171 (373)
T cd04950 101 FGRPILWYYTPYTLPVAALLQASLVVYDCVDDLSAFPGG---PPE-----LLEAERRLLKRADLVFTTSPSLYEAKRRL- 171 (373)
T ss_pred CCCcEEEEeCccHHHHHhhcCCCeEEEEcccchhccCCC---CHH-----HHHHHHHHHHhCCEEEECCHHHHHHHhhC-
Confidence 555666666554444444444589999998743221111 111 11678889999999999999999877764
Q ss_pred ccCCCCceeecCCCCCCCCCCCCCccchh-hhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEE
Q psy12587 155 RSLDHKCLDILYPSVYTEGLEKTTPEPIE-NVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKL 233 (390)
Q Consensus 155 ~~~~~~~~~vi~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l 233 (390)
..++.++|||+|.+.|.+....... +.. ...++++++|+|++.+.++++.+.++++ ..|+ ++|
T Consensus 172 ----~~~i~~i~ngvd~~~f~~~~~~~~~~~~~---~~~~~~~i~y~G~l~~~~d~~ll~~la~----~~p~-----~~~ 235 (373)
T cd04950 172 ----NPNVVLVPNGVDYEHFAAARDPPPPPADL---AALPRPVIGYYGAIAEWLDLELLEALAK----ARPD-----WSF 235 (373)
T ss_pred ----CCCEEEcccccCHHHhhcccccCCChhHH---hcCCCCEEEEEeccccccCHHHHHHHHH----HCCC-----CEE
Confidence 2689999999999888654321110 111 2246789999999999878766554443 3453 999
Q ss_pred EEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCC-----CCCCccHHhhhhcCC
Q psy12587 234 VVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSN-----EHFGIVPIEAMFCKR 308 (390)
Q Consensus 234 ~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~-----e~~~~~~~Ea~a~G~ 308 (390)
+++|.++.. .+...+ .. .+||+++|+++++++..+++.+|++++|+.. +++|++++||||||+
T Consensus 236 vliG~~~~~--------~~~~~~---~~-~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~ 303 (373)
T cd04950 236 VLIGPVDVS--------IDPSAL---LR-LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGK 303 (373)
T ss_pred EEECCCcCc--------cChhHh---cc-CCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCC
Confidence 999987322 111111 11 3789999999999999999999999999763 468999999999999
Q ss_pred CEEEecCCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHh
Q psy12587 309 PVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNN 383 (390)
Q Consensus 309 pvi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
|||+++.+...+ ....++++..|+++++++|.+++.++.....+ .+++ ..+.+||+..++++.+.+.+
T Consensus 304 PVVat~~~~~~~---~~~~~~~~~~d~~~~~~ai~~~l~~~~~~~~~---~~~~-~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 304 PVVATPLPEVRR---YEDEVVLIADDPEEFVAAIEKALLEDGPARER---RRLR-LAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred CEEecCcHHHHh---hcCcEEEeCCCHHHHHHHHHHHHhcCCchHHH---HHHH-HHHHCCHHHHHHHHHHHHHh
Confidence 999998655443 33334444438999999999976654412222 1222 45899999999999976654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-27 Score=209.72 Aligned_cols=293 Identities=18% Similarity=0.194 Sum_probs=221.7
Q ss_pred CCCEEEEcccccchhHHHhhc-------ccEEEEeecCCccccchh------hhhhhhcc------cchhhHHHHHhcCc
Q psy12587 76 KPDLVFCDLVSICIPILQAKQ-------FKVLFYCHYPDQLLSKQG------SFLKSIYR------FPLNKLEEWTTCKA 136 (390)
Q Consensus 76 ~~Dvi~~~~~~~~~~~~~~~~-------~~~v~~~h~~~~~~~~~~------~~~~~~~~------~~~~~~~~~~~~~a 136 (390)
.|||||+|+|.+++....++. +|.|+|+|+......... ......+. .-...+.+..+..|
T Consensus 130 ~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~a 209 (487)
T COG0297 130 LPDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYA 209 (487)
T ss_pred CCCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheec
Confidence 799999999988775544332 899999997544322210 00000000 01124557778899
Q ss_pred ceEEEccHhHHHHHHHH-hc-------cCCCCceeecCCCCCCCCCCCCCcc-------------------chhhhcCCC
Q psy12587 137 DKIVVNSEFTKSVVQAT-FR-------SLDHKCLDILYPSVYTEGLEKTTPE-------------------PIENVLNPL 189 (390)
Q Consensus 137 d~ii~~s~~~~~~~~~~-~~-------~~~~~~~~vi~~~~~~~~~~~~~~~-------------------~~~~~~~~l 189 (390)
|.+.++|+..++.+... ++ .....+++-|-||+|.+.+.+.... .+.+.++ +
T Consensus 210 d~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~g-L 288 (487)
T COG0297 210 DAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLG-L 288 (487)
T ss_pred cEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhC-C
Confidence 99999999999988721 11 0113567889999998877664322 1222333 4
Q ss_pred CC-CCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEE
Q psy12587 190 PG-KEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLF 268 (390)
Q Consensus 190 ~~-~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~ 268 (390)
+. .+.+.+.++||+..+||++.+++++..+.+. ..++++.|.|+. .+...+..+++.+. .++..
T Consensus 289 ~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~-------~~~~vilG~gd~------~le~~~~~la~~~~--~~~~~ 353 (487)
T COG0297 289 DVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQ-------GWQLVLLGTGDP------ELEEALRALASRHP--GRVLV 353 (487)
T ss_pred CCCCCCcEEEEeeccccccchhHHHHHHHHHHHh-------CceEEEEecCcH------HHHHHHHHHHHhcC--ceEEE
Confidence 53 3568999999999999999999999999887 488999999943 56678888888874 46766
Q ss_pred ecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceec--------CcceeeecC-CHHHHH
Q psy12587 269 LTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVD--------GRTGFLCES-NEEAFA 339 (390)
Q Consensus 269 ~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~--------~~~g~~~~~-~~~~l~ 339 (390)
.-..+..-...+++.||++++||++|++|++-++||.+|+++|+..+||..+.+.+ ..+|+++.+ ++++++
T Consensus 354 ~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~ 433 (487)
T COG0297 354 VIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLA 433 (487)
T ss_pred EeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHH
Confidence 66667777789999999999999999999999999999999999999999999875 468999998 999999
Q ss_pred HHHHHHhc---CChhH-HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhhhc
Q psy12587 340 KAMKKIVD---NDGNI-IQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKK 388 (390)
Q Consensus 340 ~~i~~l~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (390)
.+|.+.+. +++ . ++.+..++.. ..|+|+..++++.++|+.++...
T Consensus 434 ~al~rA~~~y~~~~-~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~~~~~~ 482 (487)
T COG0297 434 NALRRALVLYRAPP-LLWRKVQPNAMG---ADFSWDLSAKEYVELYKPLLSKP 482 (487)
T ss_pred HHHHHHHHHhhCCH-HHHHHHHHhhcc---cccCchhHHHHHHHHHHHHhccc
Confidence 99998764 454 4 6666655544 68999999999999999988653
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-27 Score=213.20 Aligned_cols=314 Identities=12% Similarity=0.031 Sum_probs=202.3
Q ss_pred CCcchhhh---Hhh-HhhhhcCCceeecCCcc---ccc-cCCCcceEEeccccc--cccchhhHHHHHHHHHHHHHHHHH
Q psy12587 2 LGATARLT---ITA-TAWGATGPRTTAHDHCF---KET-KDGTLPVKVIGDWLP--RNIFGKFYALCMYLRMIVIALYVA 71 (390)
Q Consensus 2 ~GG~~~~~---~~l-~~L~~~G~~V~~~~~~~---~~~-~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 71 (390)
.||...++ .+| ++|.++||+|++++... ... ...++.+..++.... ......+......+.... ....
T Consensus 7 ~g~~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~--~l~~ 84 (348)
T TIGR01133 7 AGGTGGHIFPALAVAEELIKRGVEVLWLGTKRGLEKRLVPKAGIEFYFIPVGGLRRKGSFRLIKTPLKLLKAVF--QARR 84 (348)
T ss_pred eCccHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchhcccccCCCceEEEeccCcCCCChHHHHHHHHHHHHHHH--HHHH
Confidence 35555544 589 99999999999882211 111 224566666532111 111111111111111111 1123
Q ss_pred Hhh-cCCCEEEEcccccchh---HHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHH
Q psy12587 72 WYS-EKPDLVFCDLVSICIP---ILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTK 147 (390)
Q Consensus 72 ~~~-~~~Dvi~~~~~~~~~~---~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~ 147 (390)
+++ .+||+||+|.....+. +.+..++|++++.++.. ..+.++++.+.+|.++++|+.++
T Consensus 85 ~i~~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~-----------------~~~~~~~~~~~~d~ii~~~~~~~ 147 (348)
T TIGR01133 85 ILKKFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAV-----------------PGLTNKLLSRFAKKVLISFPGAK 147 (348)
T ss_pred HHHhcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCC-----------------ccHHHHHHHHHhCeeEECchhHh
Confidence 556 8999999997544333 33444578875433211 01234667788999999999776
Q ss_pred HHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHH-HHHHHHHHHhhcccc
Q psy12587 148 SVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLEL-AIYSLNSLRSRLSDE 226 (390)
Q Consensus 148 ~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~-ll~a~~~l~~~~~~~ 226 (390)
+.+ +..+++||++...+.+.. .++.++ ++ ++.++++++|+....|++.. ++++++.+.+..
T Consensus 148 ~~~----------~~~~i~n~v~~~~~~~~~---~~~~~~-~~-~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~~--- 209 (348)
T TIGR01133 148 DHF----------EAVLVGNPVRQEIRSLPV---PRERFG-LR-EGKPTILVLGGSQGAKILNELVPKALAKLAEKG--- 209 (348)
T ss_pred hcC----------CceEEcCCcCHHHhcccc---hhhhcC-CC-CCCeEEEEECCchhHHHHHHHHHHHHHHHhhcC---
Confidence 543 237899999876554321 112222 23 36678889988777788655 458888876542
Q ss_pred cccceEE-EEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhh
Q psy12587 227 MKTHVKL-VVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMF 305 (390)
Q Consensus 227 ~~~~~~l-~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a 305 (390)
.++ +++|+++ . +++++.++++++.+.+.+. .. ++.++|+.||+++.++ .|++++|||+
T Consensus 210 ----~~~~~~~g~~~-~--------~~l~~~~~~~~l~~~v~~~---~~-~~~~~l~~ad~~v~~~----g~~~l~Ea~~ 268 (348)
T TIGR01133 210 ----IQIVHQTGKND-L--------EKVKNVYQELGIEAIVTFI---DE-NMAAAYAAADLVISRA----GASTVAELAA 268 (348)
T ss_pred ----cEEEEECCcch-H--------HHHHHHHhhCCceEEecCc---cc-CHHHHHHhCCEEEECC----ChhHHHHHHH
Confidence 444 3444432 2 6778888888775545554 22 6689999999999865 2689999999
Q ss_pred cCCCEEEecCCC-------cccceecCcceeeecC-C--HHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHH
Q psy12587 306 CKRPVIAVNSGG-------PKESVVDGRTGFLCES-N--EEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSI 375 (390)
Q Consensus 306 ~G~pvi~~~~~~-------~~e~i~~~~~g~~~~~-~--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (390)
+|+|+|+++.++ ..+++.++.+|++++. | +++++++|.++++|++ .+++|++++++.+ +....+++++
T Consensus 269 ~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~~~~~~~-~~~~~~~i~~ 346 (348)
T TIGR01133 269 AGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPA-NLEAMAEAARKLA-KPDAAKRIAE 346 (348)
T ss_pred cCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHH-HHHHHHHHHHhcC-CccHHHHHHh
Confidence 999999998754 2357778889999977 5 9999999999999988 9999999998876 5566555544
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-27 Score=216.20 Aligned_cols=331 Identities=16% Similarity=0.117 Sum_probs=219.0
Q ss_pred CcchhhhHhh-HhhhhcCCc----eeecCCcccc----ccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHh
Q psy12587 3 GATARLTITA-TAWGATGPR----TTAHDHCFKE----TKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWY 73 (390)
Q Consensus 3 GG~~~~~~~l-~~L~~~G~~----V~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (390)
.|-...+..| +.|.+++++ ||..+....+ ....++.+.+++...+ ..+. .++
T Consensus 60 ~Ge~~~~~~l~~~l~~~~~~~~i~~t~~t~~~~~~~~~~~~~~~~~~~~P~d~~-------~~~~------------~~l 120 (425)
T PRK05749 60 VGETRAAIPLIRALRKRYPDLPILVTTMTPTGSERAQALFGDDVEHRYLPYDLP-------GAVR------------RFL 120 (425)
T ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHhcCCCceEEEecCCcH-------HHHH------------HHH
Confidence 3566788889 999998766 3333211111 1122344444422111 1111 234
Q ss_pred h-cCCCEEEEcccccc---hhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHH
Q psy12587 74 S-EKPDLVFCDLVSIC---IPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSV 149 (390)
Q Consensus 74 ~-~~~Dvi~~~~~~~~---~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 149 (390)
+ .+||+++++..... +..++..++|++++.|..... + .... ....++.+.+++.+|.+++.|+..++.
T Consensus 121 ~~~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~-----s-~~~~--~~~~~~~r~~~~~~d~ii~~S~~~~~~ 192 (425)
T PRK05749 121 RFWRPKLVIIMETELWPNLIAELKRRGIPLVLANARLSER-----S-FKRY--QKFKRFYRLLFKNIDLVLAQSEEDAER 192 (425)
T ss_pred HhhCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChh-----h-HHHH--HHHHHHHHHHHHhCCEEEECCHHHHHH
Confidence 4 89999998753322 223334458888765532110 0 0000 113456677889999999999999999
Q ss_pred HHHHhccCCCCceeecCCCCCCCCCCCCC----ccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhccc
Q psy12587 150 VQATFRSLDHKCLDILYPSVYTEGLEKTT----PEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSD 225 (390)
Q Consensus 150 ~~~~~~~~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~ 225 (390)
+.+. +.+.+ +.+++|. +.+...... ....++.+ . .+..+++++|+. .|+.+.+++|++.+.++.|+
T Consensus 193 l~~~--g~~~~-i~vi~n~-~~d~~~~~~~~~~~~~~r~~~---~-~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~ 262 (425)
T PRK05749 193 FLAL--GAKNE-VTVTGNL-KFDIEVPPELAARAATLRRQL---A-PNRPVWIAASTH--EGEEELVLDAHRALLKQFPN 262 (425)
T ss_pred HHHc--CCCCC-cEecccc-cccCCCChhhHHHHHHHHHHh---c-CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCC
Confidence 9875 34345 8888885 222222111 11223333 2 245667777764 57899999999999887775
Q ss_pred ccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCC------------ChHHHHHHHHhcceEEe-CCC
Q psy12587 226 EMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSP------------SDAAKISLFKFCHCIIY-TPS 292 (390)
Q Consensus 226 ~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~------------~~~e~~~~~~~adv~v~-ps~ 292 (390)
++|+|+|+++.. .+++++.++++|+. .+.+.+.. +..|+..+|+.||++++ +|.
T Consensus 263 -----~~liivG~g~~r-------~~~l~~~~~~~gl~-~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~~S~ 329 (425)
T PRK05749 263 -----LLLILVPRHPER-------FKEVEELLKKAGLS-YVRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVGGSL 329 (425)
T ss_pred -----cEEEEcCCChhh-------HHHHHHHHHhCCCc-EEEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEECCCc
Confidence 999999998752 15788899988874 34443321 23588999999999655 677
Q ss_pred CCCCCccHHhhhhcCCCEEEecC-CCcccceecC-cceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcC
Q psy12587 293 NEHFGIVPIEAMFCKRPVIAVNS-GGPKESVVDG-RTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFS 369 (390)
Q Consensus 293 ~e~~~~~~~Ea~a~G~pvi~~~~-~~~~e~i~~~-~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ 369 (390)
.|++|.+++|||+||+|||+++. ++..++.+.. .+|.++++ |+++++++|.++++|++ .+++|++++++.+.++
T Consensus 330 ~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll~~~~-~~~~m~~~a~~~~~~~-- 406 (425)
T PRK05749 330 VKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLLTDPD-ARQAYGEAGVAFLKQN-- 406 (425)
T ss_pred CCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHhC--
Confidence 79999999999999999999875 5566655442 35777776 99999999999999999 9999999999998554
Q ss_pred HHHHHHHHHHHHHhhhhh
Q psy12587 370 FQAFSIQLNTIVNNMLDK 387 (390)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~ 387 (390)
....+++.+.+.+.+.+
T Consensus 407 -~~~~~~~~~~l~~~l~~ 423 (425)
T PRK05749 407 -QGALQRTLQLLEPYLPP 423 (425)
T ss_pred -ccHHHHHHHHHHHhccc
Confidence 35667777777776643
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-27 Score=211.38 Aligned_cols=264 Identities=17% Similarity=0.142 Sum_probs=187.6
Q ss_pred HHhh-cCCCEEEEcccccchhHHHhhc---ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhH
Q psy12587 71 AWYS-EKPDLVFCDLVSICIPILQAKQ---FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFT 146 (390)
Q Consensus 71 ~~~~-~~~Dvi~~~~~~~~~~~~~~~~---~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~ 146 (390)
.+++ .+||+||++.+...++.++... +|++..+++... ...++.+++|.++++|+..
T Consensus 98 ~~l~~~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~-------------------~~~~~~~~ad~i~~~s~~~ 158 (380)
T PRK13609 98 LLLQAEKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCL-------------------HKIWVHREVDRYFVATDHV 158 (380)
T ss_pred HHHHHhCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCC-------------------CcccccCCCCEEEECCHHH
Confidence 4566 9999999987655555443332 787644443210 0134567899999999999
Q ss_pred HHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccc
Q psy12587 147 KSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDE 226 (390)
Q Consensus 147 ~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~ 226 (390)
++.+.+. +.+.+++.+++++++..+.........++.++ ++.+.++++++.|+....|++..+++++.+. +
T Consensus 159 ~~~l~~~--gi~~~ki~v~G~p~~~~f~~~~~~~~~~~~~~-l~~~~~~il~~~G~~~~~k~~~~li~~l~~~----~-- 229 (380)
T PRK13609 159 KKVLVDI--GVPPEQVVETGIPIRSSFELKINPDIIYNKYQ-LCPNKKILLIMAGAHGVLGNVKELCQSLMSV----P-- 229 (380)
T ss_pred HHHHHHc--CCChhHEEEECcccChHHcCcCCHHHHHHHcC-CCCCCcEEEEEcCCCCCCcCHHHHHHHHhhC----C--
Confidence 9999875 45567898888877654333222333445554 3444566777789988889999998887642 3
Q ss_pred cccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhc
Q psy12587 227 MKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFC 306 (390)
Q Consensus 227 ~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~ 306 (390)
+++++++|+... ...+++++.+++++ ++|+++|++++ +.++|+.||+++. ++.|++++|||+|
T Consensus 230 ---~~~~viv~G~~~------~~~~~l~~~~~~~~--~~v~~~g~~~~--~~~l~~~aD~~v~----~~gg~t~~EA~a~ 292 (380)
T PRK13609 230 ---DLQVVVVCGKNE------ALKQSLEDLQETNP--DALKVFGYVEN--IDELFRVTSCMIT----KPGGITLSEAAAL 292 (380)
T ss_pred ---CcEEEEEeCCCH------HHHHHHHHHHhcCC--CcEEEEechhh--HHHHHHhccEEEe----CCCchHHHHHHHh
Confidence 388877754321 22366777776654 68999999864 5799999999884 3468899999999
Q ss_pred CCCEEEec-CCCcc----cceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHH
Q psy12587 307 KRPVIAVN-SGGPK----ESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTI 380 (390)
Q Consensus 307 G~pvi~~~-~~~~~----e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
|+|+|+++ .++.. +++.+ +|..+.. |+++++++|.+++++++ .+++|++++++.. +.++++.+++.+.+.
T Consensus 293 g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~~~l~~~i~~ll~~~~-~~~~m~~~~~~~~-~~~s~~~i~~~i~~~ 368 (380)
T PRK13609 293 GVPVILYKPVPGQEKENAMYFER--KGAAVVIRDDEEVFAKTEALLQDDM-KLLQMKEAMKSLY-LPEPADHIVDDILAE 368 (380)
T ss_pred CCCEEECCCCCCcchHHHHHHHh--CCcEEEECCHHHHHHHHHHHHCCHH-HHHHHHHHHHHhC-CCchHHHHHHHHHHh
Confidence 99999986 34421 23332 3433434 99999999999999998 9999999998876 678999999999988
Q ss_pred HHh
Q psy12587 381 VNN 383 (390)
Q Consensus 381 ~~~ 383 (390)
+..
T Consensus 369 ~~~ 371 (380)
T PRK13609 369 NHV 371 (380)
T ss_pred hhh
Confidence 764
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-26 Score=205.19 Aligned_cols=269 Identities=16% Similarity=0.164 Sum_probs=188.7
Q ss_pred HHhh-cCCCEEEEcccccchhHHHhh---cccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhH
Q psy12587 71 AWYS-EKPDLVFCDLVSICIPILQAK---QFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFT 146 (390)
Q Consensus 71 ~~~~-~~~Dvi~~~~~~~~~~~~~~~---~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~ 146 (390)
.+++ .+||+|+++.+...+..++.. ++|++....+.. .. ..|+.+.+|.+++.|+.+
T Consensus 98 ~~l~~~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~--------~~-----------~~w~~~~~d~~~v~s~~~ 158 (391)
T PRK13608 98 NLLIKEKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYR--------LH-----------KNWITPYSTRYYVATKET 158 (391)
T ss_pred HHHHHhCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCC--------cc-----------cccccCCCCEEEECCHHH
Confidence 4556 999999998764433333322 278754433310 00 123457899999999999
Q ss_pred HHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccc
Q psy12587 147 KSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDE 226 (390)
Q Consensus 147 ~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~ 226 (390)
++.+.+. +.+.+++.+++++++..+.........+..++ ++.+.+.++++.|++...|+++.+++++.+ ..+
T Consensus 159 ~~~l~~~--gi~~~ki~v~GiPv~~~f~~~~~~~~~~~~~~-l~~~~~~ilv~~G~lg~~k~~~~li~~~~~---~~~-- 230 (391)
T PRK13608 159 KQDFIDV--GIDPSTVKVTGIPIDNKFETPIDQKQWLIDNN-LDPDKQTILMSAGAFGVSKGFDTMITDILA---KSA-- 230 (391)
T ss_pred HHHHHHc--CCCHHHEEEECeecChHhcccccHHHHHHHcC-CCCCCCEEEEECCCcccchhHHHHHHHHHh---cCC--
Confidence 9998875 45578899998888765443333333444444 444456677789999988999999998632 223
Q ss_pred cccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhc
Q psy12587 227 MKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFC 306 (390)
Q Consensus 227 ~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~ 306 (390)
+++++++++.+. ...++++ +..+..++|.++|+++ ++.++|+.||+++.. +.|+++.|||++
T Consensus 231 ---~~~~vvv~G~~~------~l~~~l~---~~~~~~~~v~~~G~~~--~~~~~~~~aDl~I~k----~gg~tl~EA~a~ 292 (391)
T PRK13608 231 ---NAQVVMICGKSK------ELKRSLT---AKFKSNENVLILGYTK--HMNEWMASSQLMITK----PGGITISEGLAR 292 (391)
T ss_pred ---CceEEEEcCCCH------HHHHHHH---HHhccCCCeEEEeccc--hHHHHHHhhhEEEeC----CchHHHHHHHHh
Confidence 377766643321 1113333 3333456899999985 568999999999963 468899999999
Q ss_pred CCCEEEecC-CC----cccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHH
Q psy12587 307 KRPVIAVNS-GG----PKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIV 381 (390)
Q Consensus 307 G~pvi~~~~-~~----~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
|+|+|+++. ++ ...++.+.+.|+... |+++++++|.++++|++ .+++|++++++.. +.++++.+++.+.+++
T Consensus 293 G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~-~~~~l~~~i~~ll~~~~-~~~~m~~~~~~~~-~~~s~~~i~~~l~~l~ 369 (391)
T PRK13608 293 CIPMIFLNPAPGQELENALYFEEKGFGKIAD-TPEEAIKIVASLTNGNE-QLTNMISTMEQDK-IKYATQTICRDLLDLI 369 (391)
T ss_pred CCCEEECCCCCCcchhHHHHHHhCCcEEEeC-CHHHHHHHHHHHhcCHH-HHHHHHHHHHHhc-CCCCHHHHHHHHHHHh
Confidence 999999864 33 122334555666555 99999999999999998 9999999999986 6899999999999998
Q ss_pred Hhhhhh
Q psy12587 382 NNMLDK 387 (390)
Q Consensus 382 ~~~~~~ 387 (390)
....+.
T Consensus 370 ~~~~~~ 375 (391)
T PRK13608 370 GHSSQP 375 (391)
T ss_pred hhhhhh
Confidence 875543
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-25 Score=201.94 Aligned_cols=264 Identities=13% Similarity=0.075 Sum_probs=188.4
Q ss_pred HHhh-cCCCEEEEccccc----chhHHHhh-----cccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEE
Q psy12587 71 AWYS-EKPDLVFCDLVSI----CIPILQAK-----QFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIV 140 (390)
Q Consensus 71 ~~~~-~~~Dvi~~~~~~~----~~~~~~~~-----~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii 140 (390)
.+++ .+||+||++++.. ...+..+. ++|++.++.+.... ...++.+.+|.++
T Consensus 94 ~~i~~~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~------------------~~~w~~~~~d~~~ 155 (382)
T PLN02605 94 KGLMKYKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTC------------------HPTWFHKGVTRCF 155 (382)
T ss_pred HHHHhcCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCc------------------CcccccCCCCEEE
Confidence 4666 8999999976432 11222232 37887766553110 1134467899999
Q ss_pred EccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCC-CccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHH
Q psy12587 141 VNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKT-TPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSL 219 (390)
Q Consensus 141 ~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l 219 (390)
++|+..++.+.+. +.+.+++.+++++++.++..+. .....++.++ +++ +.++++++|+....|++..+++++..+
T Consensus 156 ~~s~~~~~~l~~~--g~~~~ki~v~g~~v~~~f~~~~~~~~~~r~~~g-l~~-~~~~il~~Gg~~g~~~~~~li~~l~~~ 231 (382)
T PLN02605 156 CPSEEVAKRALKR--GLEPSQIRVYGLPIRPSFARAVRPKDELRRELG-MDE-DLPAVLLMGGGEGMGPLEETARALGDS 231 (382)
T ss_pred ECCHHHHHHHHHc--CCCHHHEEEECcccCHhhccCCCCHHHHHHHcC-CCC-CCcEEEEECCCcccccHHHHHHHHHHh
Confidence 9999999998876 4657899999999987654432 2344566665 343 677889999988899999999999865
Q ss_pred Hh----hcccccccceE-EEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCC
Q psy12587 220 RS----RLSDEMKTHVK-LVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNE 294 (390)
Q Consensus 220 ~~----~~~~~~~~~~~-l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e 294 (390)
.. ..+ +.+ ++++|.+. .+.+++++. ....+|.++|+++ ++.++|+.||++|.++
T Consensus 232 ~~~~~~~~~-----~~~~~vi~G~~~-------~~~~~L~~~----~~~~~v~~~G~~~--~~~~l~~aaDv~V~~~--- 290 (382)
T PLN02605 232 LYDKNLGKP-----IGQVVVICGRNK-------KLQSKLESR----DWKIPVKVRGFVT--NMEEWMGACDCIITKA--- 290 (382)
T ss_pred hccccccCC-----CceEEEEECCCH-------HHHHHHHhh----cccCCeEEEeccc--cHHHHHHhCCEEEECC---
Confidence 31 122 254 66777652 112334332 2235799999996 5789999999999865
Q ss_pred CCCccHHhhhhcCCCEEEecC------CCcccceecCcceeeecCCHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHhhh
Q psy12587 295 HFGIVPIEAMFCKRPVIAVNS------GGPKESVVDGRTGFLCESNEEAFAKAMKKIVDN-DGNIIQQFSQFGFNRFNEK 367 (390)
Q Consensus 295 ~~~~~~~Ea~a~G~pvi~~~~------~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~ 367 (390)
.|++++|||+||+|+|+++. ++. +.+.+++.|+.+. |+++++++|.+++++ ++ .+++|++++++.. ..
T Consensus 291 -g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~g~g~~~~-~~~~la~~i~~ll~~~~~-~~~~m~~~~~~~~-~~ 365 (382)
T PLN02605 291 -GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDNGFGAFSE-SPKEIARIVAEWFGDKSD-ELEAMSENALKLA-RP 365 (382)
T ss_pred -CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhCCceeecC-CHHHHHHHHHHHHcCCHH-HHHHHHHHHHHhc-CC
Confidence 47899999999999999984 333 3444555676654 999999999999998 77 8999999999887 67
Q ss_pred cCHHHHHHHHHHHHH
Q psy12587 368 FSFQAFSIQLNTIVN 382 (390)
Q Consensus 368 ~~~~~~~~~~~~~~~ 382 (390)
.+.+.+++.+.+...
T Consensus 366 ~a~~~i~~~l~~~~~ 380 (382)
T PLN02605 366 EAVFDIVHDLHELVR 380 (382)
T ss_pred chHHHHHHHHHHHhh
Confidence 888888877766543
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=190.49 Aligned_cols=160 Identities=31% Similarity=0.505 Sum_probs=144.4
Q ss_pred CCCCCeEEEEeecccccCCHHHHHHHHHHHHhh-cccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEE
Q psy12587 190 PGKEDIVFLSINRYERKKNLELAIYSLNSLRSR-LSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLF 268 (390)
Q Consensus 190 ~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~-~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~ 268 (390)
..+++++|+++|++.+.||++.+++++..+.++ .+ ++.++|+|.+.. ...++..++.+++.+++.+
T Consensus 11 ~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~-----~~~l~i~G~~~~--------~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 11 IPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNP-----NYKLVIVGDGEY--------KKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp T-TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHT-----TEEEEEESHCCH--------HHHHHHHHHHTTCGTTEEE
T ss_pred CCCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCC-----CeEEEEEccccc--------ccccccccccccccccccc
Confidence 335889999999999999999999999999875 55 499999995543 3789999999999999999
Q ss_pred ecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhc
Q psy12587 269 LTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVD 347 (390)
Q Consensus 269 ~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~ 347 (390)
+|.++++++..+|+.||++++||..|++|.+++|||+||+|||+++.++..|++.++.+|+++++ |+++++++|.++++
T Consensus 78 ~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~~l~ 157 (172)
T PF00534_consen 78 LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEKLLN 157 (172)
T ss_dssp EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHHHHH
T ss_pred cccccccccccccccceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred CChhHHHHHHHHHHHH
Q psy12587 348 NDGNIIQQFSQFGFNR 363 (390)
Q Consensus 348 ~~~~~~~~~~~~~~~~ 363 (390)
+++ .++.|+++++++
T Consensus 158 ~~~-~~~~l~~~~~~~ 172 (172)
T PF00534_consen 158 DPE-LRQKLGKNARER 172 (172)
T ss_dssp HHH-HHHHHHHHHHHH
T ss_pred CHH-HHHHHHHHhcCC
Confidence 998 999999999864
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-25 Score=215.93 Aligned_cols=297 Identities=14% Similarity=0.162 Sum_probs=208.6
Q ss_pred HHhh--cCCCEEEEcccccchhHHHhhc----ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccH
Q psy12587 71 AWYS--EKPDLVFCDLVSICIPILQAKQ----FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSE 144 (390)
Q Consensus 71 ~~~~--~~~Dvi~~~~~~~~~~~~~~~~----~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~ 144 (390)
.+.+ ..=|+|++|++...+....+++ .++.++.|-|.+......... .+.-.-..+-.||.|-+.+.
T Consensus 140 ~i~~~~~~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e~fr~lp-------~r~~il~gll~aDligF~t~ 212 (797)
T PLN03063 140 VVKENYEEGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEIYKTLP-------SRSELLRAVLTADLIGFHTY 212 (797)
T ss_pred HHHHhcCCCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHHHHhhCC-------CHHHHHHHHhcCCEEEeCCH
Confidence 3444 4447999999776554433332 799999997654322111000 01111222457889988888
Q ss_pred hHHHHHHHHhcc---C-----------CCCceeecCCCCCCCCCCCCCcc--------chhhhcCCCCCCCCeEEEEeec
Q psy12587 145 FTKSVVQATFRS---L-----------DHKCLDILYPSVYTEGLEKTTPE--------PIENVLNPLPGKEDIVFLSINR 202 (390)
Q Consensus 145 ~~~~~~~~~~~~---~-----------~~~~~~vi~~~~~~~~~~~~~~~--------~~~~~~~~l~~~~~~~i~~~g~ 202 (390)
..+..+.+.... . ...++.++|+|||++.|.+.... .+++.+ .++.+|+++||
T Consensus 213 ~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-----~~~~lIl~VgR 287 (797)
T PLN03063 213 DFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFF-----AGRKVILGVDR 287 (797)
T ss_pred HHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhc-----CCCeEEEEecc
Confidence 887777652110 0 12468899999998877643211 112222 25678899999
Q ss_pred ccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcC--CC---------CcEEEecC
Q psy12587 203 YERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLK--LS---------DNVLFLTS 271 (390)
Q Consensus 203 ~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~--l~---------~~v~~~g~ 271 (390)
+.+.||+..+++|++.+.+++|+ ...++.|++++... . .+... ++++++.++++. +. +.+.+.+.
T Consensus 288 Ld~~KGi~~lL~Afe~lL~~~P~-~~~kvvLvqia~ps-r-~~~~~-y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~ 363 (797)
T PLN03063 288 LDMIKGIPQKYLAFEKFLEENPE-WRDKVMLVQIAVPT-R-NDVPE-YQKLKSQVHELVGRINGRFGSVSSVPIHHLDCS 363 (797)
T ss_pred cccccCHHHHHHHHHHHHHhCcc-ccCcEEEEEEecCC-C-CchHH-HHHHHHHHHHHHHHhhcccccCCCceeEEecCC
Confidence 99999999999999999888875 11124455444221 1 01112 244555555442 21 12234457
Q ss_pred CChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCC----EEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHh
Q psy12587 272 PSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRP----VIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIV 346 (390)
Q Consensus 272 ~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~p----vi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~ 346 (390)
++.+++..+|+.||++++||..||+|++++||||||+| +|+|..+|..+.+ +.+|+++++ |+++++++|.+++
T Consensus 364 v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL 441 (797)
T PLN03063 364 VDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGALLVNPWNITEVSSAIKEAL 441 (797)
T ss_pred CCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCeEEECCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 9999999988876 457999999 9999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhh
Q psy12587 347 DNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLD 386 (390)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (390)
+++.+++++..+..++.+ .+++|..+++.+++.++++..
T Consensus 442 ~m~~~er~~r~~~~~~~v-~~~~~~~Wa~~fl~~l~~~~~ 480 (797)
T PLN03063 442 NMSDEERETRHRHNFQYV-KTHSAQKWADDFMSELNDIIV 480 (797)
T ss_pred hCCHHHHHHHHHHHHHhh-hhCCHHHHHHHHHHHHHHHhh
Confidence 966547888888888887 799999999999999887764
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-24 Score=210.50 Aligned_cols=295 Identities=14% Similarity=0.171 Sum_probs=207.3
Q ss_pred cCCCEEEEcccccchhHHHhhc----ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHH
Q psy12587 75 EKPDLVFCDLVSICIPILQAKQ----FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVV 150 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~~~~~----~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 150 (390)
..-|+|++|++...+....++. .++-++.|.|.+..... +. .. .+.-.-..+-.+|.|-+.+......+
T Consensus 132 ~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~~~~f----~~-lp--~~~~ll~~ll~~Dligf~t~~~~r~F 204 (726)
T PRK14501 132 RPGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSFEVF----RL-LP--WREEILEGLLGADLIGFHTYDYVRHF 204 (726)
T ss_pred CCCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCChHHH----hh-CC--ChHHHHHHHhcCCeEEeCCHHHHHHH
Confidence 4558999999876554443332 68888999765422111 11 00 11111223457899999888877666
Q ss_pred HHHhcc------------C--CCCceeecCCCCCCCCCCCCCcc-c-------hhhhcCCCCCCCCeEEEEeecccccCC
Q psy12587 151 QATFRS------------L--DHKCLDILYPSVYTEGLEKTTPE-P-------IENVLNPLPGKEDIVFLSINRYERKKN 208 (390)
Q Consensus 151 ~~~~~~------------~--~~~~~~vi~~~~~~~~~~~~~~~-~-------~~~~~~~l~~~~~~~i~~~g~~~~~K~ 208 (390)
.+.... . ...++.++|+|+|++.|.+.... . +++.. .++++|+++||+.+.||
T Consensus 205 l~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~-----~~~~~il~VgRl~~~Kg 279 (726)
T PRK14501 205 LSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDL-----RGRKIILSIDRLDYTKG 279 (726)
T ss_pred HHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHc-----CCCEEEEEecCcccccC
Confidence 553110 0 02358999999999888654211 1 12221 35678999999999999
Q ss_pred HHHHHHHHHHHHhhcccccccceEEEEEcCCCCCC-cchhHHHHHHHHHHHHcC-------CCCcEEEecCCChHHHHHH
Q psy12587 209 LELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHN-IENVEYYKELGVLVKKLK-------LSDNVLFLTSPSDAAKISL 280 (390)
Q Consensus 209 ~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~-~~~~~y~~~~~~~~~~~~-------l~~~v~~~g~~~~~e~~~~ 280 (390)
+..+++|+..+.+++|+ ...+++|+++|.+.... +....+..++.+++.+.+ ..+.+.+.|.++.+++..+
T Consensus 280 i~~~l~A~~~ll~~~p~-~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~l 358 (726)
T PRK14501 280 IPRRLLAFERFLEKNPE-WRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVAL 358 (726)
T ss_pred HHHHHHHHHHHHHhCcc-ccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHH
Confidence 99999999999888774 11247888887432211 222344455555544332 1234567789999999999
Q ss_pred HHhcceEEeCCCCCCCCccHHhhhhcCC-----CEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHH
Q psy12587 281 FKFCHCIIYTPSNEHFGIVPIEAMFCKR-----PVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQ 354 (390)
Q Consensus 281 ~~~adv~v~ps~~e~~~~~~~Ea~a~G~-----pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~ 354 (390)
|+.||++++||..||+|++++|||+||+ ||++...|+..++. .|+++++ |+++++++|.++++++.+++.
T Consensus 359 y~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~llv~P~d~~~la~ai~~~l~~~~~e~~ 434 (726)
T PRK14501 359 YRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EALLVNPNDIEGIAAAIKRALEMPEEEQR 434 (726)
T ss_pred HHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC----cCeEECCCCHHHHHHHHHHHHcCCHHHHH
Confidence 9999999999999999999999999955 66666667777765 4899999 999999999999998753566
Q ss_pred HHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhhh
Q psy12587 355 QFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDK 387 (390)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (390)
...+++++.+ .+|||+.+++++++.++++..+
T Consensus 435 ~r~~~~~~~v-~~~~~~~w~~~~l~~l~~~~~~ 466 (726)
T PRK14501 435 ERMQAMQERL-RRYDVHKWASDFLDELREAAEK 466 (726)
T ss_pred HHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHhh
Confidence 6667788887 7999999999999999987543
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-22 Score=182.81 Aligned_cols=292 Identities=14% Similarity=0.086 Sum_probs=217.4
Q ss_pred cCCCEEEEcccccchhHHHhhc----ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHH
Q psy12587 75 EKPDLVFCDLVSICIPILQAKQ----FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVV 150 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~~~~~----~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 150 (390)
..-|+|++|+....+....+.. .++-+..|-|.+..... +.+- ....+ -..+-.||.|-+.+...++.+
T Consensus 131 ~~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs~eif----r~LP--~r~~l-l~glL~aDliGFqt~~y~~~F 203 (487)
T TIGR02398 131 AEGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADVF----NILP--WREQI-IGSLLCCDYIGFHIPRYVENF 203 (487)
T ss_pred CCCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCChHHH----hhCC--chHHH-HHHHhcCCeEEeCCHHHHHHH
Confidence 4458999999776554443333 68888889764422111 1100 01111 222447899999998888777
Q ss_pred HHHhcc---C--------------------------------CCCceeecCCCCCCCCCCCCCc--------cchhhhcC
Q psy12587 151 QATFRS---L--------------------------------DHKCLDILYPSVYTEGLEKTTP--------EPIENVLN 187 (390)
Q Consensus 151 ~~~~~~---~--------------------------------~~~~~~vi~~~~~~~~~~~~~~--------~~~~~~~~ 187 (390)
.+.... . ..-++.++|.|||++.|..... ..+++.++
T Consensus 204 l~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~ 283 (487)
T TIGR02398 204 VDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELA 283 (487)
T ss_pred HHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcC
Confidence 763210 0 0113788999999988755321 22444442
Q ss_pred CCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCC-CcchhHHHHHHHHHHHHc------
Q psy12587 188 PLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPH-NIENVEYYKELGVLVKKL------ 260 (390)
Q Consensus 188 ~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~-~~~~~~y~~~~~~~~~~~------ 260 (390)
++.+|++++|+...||+...++|+.++.+++|+ ...++.|+++|..... .+..+++..++++++.+.
T Consensus 284 -----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe-~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~ 357 (487)
T TIGR02398 284 -----GVKLILSAERVDYTKGILEKLNAYERLLERRPE-LLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFAR 357 (487)
T ss_pred -----CceEEEEecccccccCHHHHHHHHHHHHHhCcc-ccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCC
Confidence 678899999999999999999999999999885 2235789988865432 223355667777777765
Q ss_pred -CCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCC----CEEEecCCCcccceecCcceeeecC-C
Q psy12587 261 -KLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKR----PVIAVNSGGPKESVVDGRTGFLCES-N 334 (390)
Q Consensus 261 -~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~----pvi~~~~~~~~e~i~~~~~g~~~~~-~ 334 (390)
+..+.+.+.+.++.+++..+|+.||+++.+|..||++++..||++|+. |+|.|..+|..+.+ ..+++++| |
T Consensus 358 ~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGaa~~l---~~AllVNP~d 434 (487)
T TIGR02398 358 IGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVEL---KGALLTNPYD 434 (487)
T ss_pred CCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEeccccchhhc---CCCEEECCCC
Confidence 556678889999999999999999999999999999999999999998 99999999888766 35799999 9
Q ss_pred HHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHh
Q psy12587 335 EEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNN 383 (390)
Q Consensus 335 ~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
+++++++|.++++++.+++++..+..++.+ ..++...+++.+++-+..
T Consensus 435 ~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v-~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 435 PVRMDETIYVALAMPKAEQQARMREMFDAV-NYYDVQRWADEFLAAVSP 482 (487)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHhhh
Confidence 999999999999999866766667777777 789999999998876654
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.2e-24 Score=178.27 Aligned_cols=120 Identities=36% Similarity=0.507 Sum_probs=104.7
Q ss_pred EeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCC-hHHH
Q psy12587 199 SINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPS-DAAK 277 (390)
Q Consensus 199 ~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~-~~e~ 277 (390)
++|++.+.||++.+++++..+.++.++ ++++++|.+... ...+..+.+.+..++|.+.|+++ .+++
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~-----~~~~i~G~~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 175 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPD-----LKLVIAGDGPER--------EYLEELLAALLLLDRVIFLGGLDPEELL 175 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCC-----eEEEEEeCCCCh--------HHHHHHHHhcCCcccEEEeCCCCcHHHH
Confidence 889999999999999999999987775 999999998775 55555567777789999999984 4555
Q ss_pred HHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceecCcceeee
Q psy12587 278 ISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLC 331 (390)
Q Consensus 278 ~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~ 331 (390)
..+++.||++++|+..|++|++++|||++|+|+|+|+.++..|++.++.+|+++
T Consensus 176 ~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 176 ALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 556666999999999999999999999999999999999999999998899864
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-23 Score=184.00 Aligned_cols=243 Identities=15% Similarity=0.069 Sum_probs=172.1
Q ss_pred cCC-CEEEEcccccch------hHHHhhc--ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHh
Q psy12587 75 EKP-DLVFCDLVSICI------PILQAKQ--FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEF 145 (390)
Q Consensus 75 ~~~-Dvi~~~~~~~~~------~~~~~~~--~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~ 145 (390)
.++ |+||++++.... .+.++.+ +|+|+++|+.+....... ......++.++++||.++++|+.
T Consensus 62 ~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~--------~~~~~~~~~~~~~aD~iI~~S~~ 133 (333)
T PRK09814 62 LKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSN--------YYLMKEEIDMLNLADVLIVHSKK 133 (333)
T ss_pred CCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhcccc--------chhhHHHHHHHHhCCEEEECCHH
Confidence 566 999998864421 1223333 899999998654211100 01145678889999999999999
Q ss_pred HHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhccc
Q psy12587 146 TKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSD 225 (390)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~ 225 (390)
+++.+.+. +.+..++.++++..+....... . ..+..+.++|+|++..... + ....+
T Consensus 134 ~~~~l~~~--g~~~~~i~~~~~~~~~~~~~~~------~-----~~~~~~~i~yaG~l~k~~~----l------~~~~~- 189 (333)
T PRK09814 134 MKDRLVEE--GLTTDKIIVQGIFDYLNDIELV------K-----TPSFQKKINFAGNLEKSPF----L------KNWSQ- 189 (333)
T ss_pred HHHHHHHc--CCCcCceEeccccccccccccc------c-----cccCCceEEEecChhhchH----H------HhcCC-
Confidence 99999875 3435677777655433211110 0 1124568999999984322 1 11223
Q ss_pred ccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCC-----------CC
Q psy12587 226 EMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPS-----------NE 294 (390)
Q Consensus 226 ~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~-----------~e 294 (390)
+++|+++|+|+.. . ...++|.|+|+++.+|+..+|+. |+.+.+.. .-
T Consensus 190 ----~~~l~i~G~g~~~--------~---------~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~ 247 (333)
T PRK09814 190 ----GIKLTVFGPNPED--------L---------ENSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKY 247 (333)
T ss_pred ----CCeEEEECCCccc--------c---------ccCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhc
Confidence 3899999998753 2 23578999999999999999998 65544321 23
Q ss_pred CCCccHHhhhhcCCCEEEecCCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHH
Q psy12587 295 HFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFS 374 (390)
Q Consensus 295 ~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (390)
.+|.++.||||||+|||+++.++..++++++.+|++++ +.+++++++.++ +++ .+++|++++++.+ +++.-..+.
T Consensus 248 ~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~G~~v~-~~~el~~~l~~~--~~~-~~~~m~~n~~~~~-~~~~~g~~~ 322 (333)
T PRK09814 248 NNPHKLSLYLAAGLPVIVWSKAAIADFIVENGLGFVVD-SLEELPEIIDNI--TEE-EYQEMVENVKKIS-KLLRNGYFT 322 (333)
T ss_pred cchHHHHHHHHCCCCEEECCCccHHHHHHhCCceEEeC-CHHHHHHHHHhc--CHH-HHHHHHHHHHHHH-HHHhcchhH
Confidence 57888999999999999999999999999999999999 888999999986 345 7899999999887 555544444
Q ss_pred HH
Q psy12587 375 IQ 376 (390)
Q Consensus 375 ~~ 376 (390)
++
T Consensus 323 ~~ 324 (333)
T PRK09814 323 KK 324 (333)
T ss_pred HH
Confidence 43
|
|
| >KOG2941|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-21 Score=159.63 Aligned_cols=360 Identities=11% Similarity=0.097 Sum_probs=237.4
Q ss_pred CCcchhhhHhhHhhhhcCCceeec---CC-cccc-ccCCCcceEEeccccccccchhh-HHHHHHHHHHHHHHHHHHhh-
Q psy12587 2 LGATARLTITATAWGATGPRTTAH---DH-CFKE-TKDGTLPVKVIGDWLPRNIFGKF-YALCMYLRMIVIALYVAWYS- 74 (390)
Q Consensus 2 ~GG~~~~~~~l~~L~~~G~~V~~~---~~-~~~~-~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~- 74 (390)
+|-..|+.++-..|++.|++|.++ +. ..++ ....++.++.++........+++ ......+.++...++. +.-
T Consensus 23 vGRSPRMqYHA~Sla~~gf~VdliGy~~s~p~e~l~~hprI~ih~m~~l~~~~~~p~~~~l~lKvf~Qfl~Ll~a-L~~~ 101 (444)
T KOG2941|consen 23 VGRSPRMQYHALSLAKLGFQVDLIGYVESIPLEELLNHPRIRIHGMPNLPFLQGGPRVLFLPLKVFWQFLSLLWA-LFVL 101 (444)
T ss_pred cCCChHHHHHHHHHHHcCCeEEEEEecCCCChHHHhcCCceEEEeCCCCcccCCCchhhhhHHHHHHHHHHHHHH-HHhc
Confidence 355667776668889999999988 21 2222 23455666666432222222211 1111222222222222 333
Q ss_pred cCCCEEEEccccc--chhH----HHhhcccEEEEeecCCcc-ccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHH
Q psy12587 75 EKPDLVFCDLVSI--CIPI----LQAKQFKVLFYCHYPDQL-LSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTK 147 (390)
Q Consensus 75 ~~~Dvi~~~~~~~--~~~~----~~~~~~~~v~~~h~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~ 147 (390)
..+|+|.+++++. .+.+ ..+.+.++++++|+..+. ......-....+-.+.+++|+.+-+.||.-.|+|+.++
T Consensus 102 ~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~~~~g~~h~lV~l~~~~E~~fgk~a~~nLcVT~AMr 181 (444)
T KOG2941|consen 102 RPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLKLKLGFQHPLVRLVRWLEKYFGKLADYNLCVTKAMR 181 (444)
T ss_pred cCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHHhhcCCCCchHHHHHHHHHHhhcccccchhhHHHHH
Confidence 9999999999653 2222 234459999999986542 11111122233445678999999999999999999999
Q ss_pred HHHHHHhccCCCCceeecCCCC-------------------CCCCCCCC---C----ccchhhhcC----CCCCCCCeEE
Q psy12587 148 SVVQATFRSLDHKCLDILYPSV-------------------YTEGLEKT---T----PEPIENVLN----PLPGKEDIVF 197 (390)
Q Consensus 148 ~~~~~~~~~~~~~~~~vi~~~~-------------------~~~~~~~~---~----~~~~~~~~~----~l~~~~~~~i 197 (390)
+.+.+.++. .+..+++.-- |...|... . ...+.++.. .+..+.+.++
T Consensus 182 ~dL~qnWgi---~ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~taf~~k~~s~~v~~~~~~pall 258 (444)
T KOG2941|consen 182 EDLIQNWGI---NRAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAREPQDKALERTAFTKKDASGDVQLLPERPALL 258 (444)
T ss_pred HHHHHhcCC---ceeEEEecCCCCCCCchhHHHHHHhhhccccchhhhcccccchhhhhhHhhhcccchhhhccCCCeEE
Confidence 999998872 3445544211 10111100 0 000111110 0122356677
Q ss_pred EEeecccccCCHHHHHHHHHHHHhhccc--ccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChH
Q psy12587 198 LSINRYERKKNLELAIYSLNSLRSRLSD--EMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDA 275 (390)
Q Consensus 198 ~~~g~~~~~K~~~~ll~a~~~l~~~~~~--~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~ 275 (390)
+...++.+..++..+++|+..-.++..+ ..-+++-++|.|.|+.. +.+.+.++++++...-....+++.+
T Consensus 259 vsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPlk--------E~Y~~~I~~~~~~~v~~~tpWL~aE 330 (444)
T KOG2941|consen 259 VSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPLK--------EKYSQEIHEKNLQHVQVCTPWLEAE 330 (444)
T ss_pred EecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCchh--------HHHHHHHHHhcccceeeeecccccc
Confidence 8888889999999999999843222211 00135888999999987 8888889999885544557899999
Q ss_pred HHHHHHHhcceEEeC--CC-CCCCCccHHhhhhcCCCEEEecCCCcccceecCcceeeecCCHHHHHHHHHHHhc----C
Q psy12587 276 AKISLFKFCHCIIYT--PS-NEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVD----N 348 (390)
Q Consensus 276 e~~~~~~~adv~v~p--s~-~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~----~ 348 (390)
+.+.+++.||+.|+. |. .=-.|+++++...||+||++-+..-+.|++++++||+++. |.+++++.+..+++ +
T Consensus 331 DYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~-Ds~eLa~ql~~lf~~fp~~ 409 (444)
T KOG2941|consen 331 DYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFE-DSEELAEQLQMLFKNFPDN 409 (444)
T ss_pred cchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEec-cHHHHHHHHHHHHhcCCCC
Confidence 999999999976653 33 2347889999999999999999999999999999999999 99999999999998 6
Q ss_pred ChhHHHHHHHHHHHHHhhhcCHHHHHHHH
Q psy12587 349 DGNIIQQFSQFGFNRFNEKFSFQAFSIQL 377 (390)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (390)
.. ...++.+++++. +...|+..-++.
T Consensus 410 a~-~l~~lkkn~~e~--~e~RW~~~W~~~ 435 (444)
T KOG2941|consen 410 AD-ELNQLKKNLREE--QELRWDESWERT 435 (444)
T ss_pred HH-HHHHHHHhhHHH--HhhhHHHHHHHh
Confidence 66 888888888887 456666554443
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.6e-22 Score=178.42 Aligned_cols=271 Identities=17% Similarity=0.126 Sum_probs=176.6
Q ss_pred Hhh-cCCCEEEEcccccc----hhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHH-hcCcceEEEccHh
Q psy12587 72 WYS-EKPDLVFCDLVSIC----IPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWT-TCKADKIVVNSEF 145 (390)
Q Consensus 72 ~~~-~~~Dvi~~~~~~~~----~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ad~ii~~s~~ 145 (390)
+++ .+||+||+|+.... ..+++..++|++...++.... .. ... +.....+.+ .+.+|.++++|+.
T Consensus 81 ~l~~~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~-~~----~~~----~~~~~~r~~~~~~ad~~~~~s~~ 151 (365)
T TIGR00236 81 LLLEEKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTG-DR----YSP----MPEEINRQLTGHIADLHFAPTEQ 151 (365)
T ss_pred HHHHcCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcC-CC----CCC----CccHHHHHHHHHHHHhccCCCHH
Confidence 445 99999999974322 233444558986433221100 00 000 001112222 3358999999999
Q ss_pred HHHHHHHHhccCCCCceeecCCCC-CCCCCCC--CCccchhhhcCCCCCCCCeEEEEeeccc-ccCCHHHHHHHHHHHHh
Q psy12587 146 TKSVVQATFRSLDHKCLDILYPSV-YTEGLEK--TTPEPIENVLNPLPGKEDIVFLSINRYE-RKKNLELAIYSLNSLRS 221 (390)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~vi~~~~-~~~~~~~--~~~~~~~~~~~~l~~~~~~~i~~~g~~~-~~K~~~~ll~a~~~l~~ 221 (390)
.++.+.+. +.+++++.+++|++ |...... ......++.+ ..++.++++..++.. ..|+++.+++++.++.+
T Consensus 152 ~~~~l~~~--G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~---~~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~ 226 (365)
T TIGR00236 152 AKDNLLRE--NVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEF---GEDKRYILLTLHRRENVGEPLENIFKAIREIVE 226 (365)
T ss_pred HHHHHHHc--CCCcccEEEeCChHHHHHHHHHhhccchhHHHhc---CCCCCEEEEecCchhhhhhHHHHHHHHHHHHHH
Confidence 99999875 56678999999996 4322111 1122233333 222344544444542 45899999999999887
Q ss_pred hcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHH
Q psy12587 222 RLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPI 301 (390)
Q Consensus 222 ~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~ 301 (390)
+.++ +.+++.|.++. +....+.+.++..++|.+.|.++..++..+++.||+++.+| |..++
T Consensus 227 ~~~~-----~~~vi~~~~~~---------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~S-----g~~~~ 287 (365)
T TIGR00236 227 EFED-----VQIVYPVHLNP---------VVREPLHKHLGDSKRVHLIEPLEYLDFLNLAANSHLILTDS-----GGVQE 287 (365)
T ss_pred HCCC-----CEEEEECCCCh---------HHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhCCEEEECC-----hhHHH
Confidence 7664 88888765432 11112333445567899999999999999999999999877 55689
Q ss_pred hhhhcCCCEEEe-cCCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHH
Q psy12587 302 EAMFCKRPVIAV-NSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLN 378 (390)
Q Consensus 302 Ea~a~G~pvi~~-~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (390)
|||+||+|||++ +.++.++.+..+ .+.+++.|++++++++.+++++++ .+++++++...+. +..+++++++.+.
T Consensus 288 EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv~~d~~~i~~ai~~ll~~~~-~~~~~~~~~~~~g-~~~a~~ri~~~l~ 362 (365)
T TIGR00236 288 EAPSLGKPVLVLRDTTERPETVEAG-TNKLVGTDKENITKAAKRLLTDPD-EYKKMSNASNPYG-DGEASERIVEELL 362 (365)
T ss_pred HHHHcCCCEEECCCCCCChHHHhcC-ceEEeCCCHHHHHHHHHHHHhChH-HHHHhhhcCCCCc-CchHHHHHHHHHH
Confidence 999999999996 667788888765 555664499999999999999988 8888876552222 3344444444443
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.1e-21 Score=171.01 Aligned_cols=229 Identities=29% Similarity=0.412 Sum_probs=189.7
Q ss_pred CcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCC-CeEEEEeecccccCCHHHHH
Q psy12587 135 KADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKE-DIVFLSINRYERKKNLELAI 213 (390)
Q Consensus 135 ~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~i~~~g~~~~~K~~~~ll 213 (390)
.++.+++.+......+...+. ..++.++|++++...+...... +.... ...++++|++.+.||++.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~i~~~g~~~~~k~~~~~i 218 (381)
T COG0438 150 LADRVIAVSPALKELLEALGV---PNKIVVIPNGIDTEKFAPARIG--------LLPEGGKFVVLYVGRLDPEKGLDLLI 218 (381)
T ss_pred cccEEEECCHHHHHHHHHhCC---CCCceEecCCcCHHHcCccccC--------CCcccCceEEEEeeccChhcCHHHHH
Confidence 478899999888666666533 3478999999998877642000 12222 37899999999999999999
Q ss_pred HHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCC
Q psy12587 214 YSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSN 293 (390)
Q Consensus 214 ~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~ 293 (390)
+++..+....++ +.+.++|.++.. .+.+...+.+++..+++.+.|.++++++..+++.||++++||..
T Consensus 219 ~~~~~~~~~~~~-----~~~~~~g~~~~~-------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~ 286 (381)
T COG0438 219 EAAAKLKKRGPD-----IKLVIVGDGPER-------REELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLS 286 (381)
T ss_pred HHHHHhhhhcCC-----eEEEEEcCCCcc-------HHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCEEEecccc
Confidence 999999988764 899999998752 14566677787777899999999988888899999999999999
Q ss_pred CCCCccHHhhhhcCCCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHH
Q psy12587 294 EHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQA 372 (390)
Q Consensus 294 e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (390)
|++|++++|||++|+|||+++.++..+++.++.+|+++.. +.+++++++..++++.+ .++.+.+.+++.+.+.|+|+.
T Consensus 287 e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 365 (381)
T COG0438 287 EGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDPE-LREELGEAARERVEEEFSWER 365 (381)
T ss_pred ccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHhcCHHH
Confidence 9999999999999999999999999999988777887776 79999999999999986 788888766666668999999
Q ss_pred HHHHHHHHHHhhhhh
Q psy12587 373 FSIQLNTIVNNMLDK 387 (390)
Q Consensus 373 ~~~~~~~~~~~~~~~ 387 (390)
.++++.+++......
T Consensus 366 ~~~~~~~~~~~~~~~ 380 (381)
T COG0438 366 IAEQLLELYEELLAE 380 (381)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999877643
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-21 Score=177.77 Aligned_cols=270 Identities=12% Similarity=0.062 Sum_probs=173.0
Q ss_pred HHhh-cCCCEEEEcccc-cchh-H--HHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHh
Q psy12587 71 AWYS-EKPDLVFCDLVS-ICIP-I--LQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEF 145 (390)
Q Consensus 71 ~~~~-~~~Dvi~~~~~~-~~~~-~--~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~ 145 (390)
.+++ .+||+||+++.. .... + ++..++|++++.+...+ .. . ....+.+.+.+|.+++.|+.
T Consensus 79 ~~l~~~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~~~-~~---------~----~~~~~~~~~~~d~i~~~~~~ 144 (380)
T PRK00025 79 RRLLAEPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPSVW-AW---------R----QGRAFKIAKATDHVLALFPF 144 (380)
T ss_pred HHHHHcCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCchh-hc---------C----chHHHHHHHHHhhheeCCcc
Confidence 4556 999999998742 2222 2 23345898877553211 00 0 01112346778999999999
Q ss_pred HHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecc-ccc-CCHHHHHHHHHHHHhhc
Q psy12587 146 TKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRY-ERK-KNLELAIYSLNSLRSRL 223 (390)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~-~~~-K~~~~ll~a~~~l~~~~ 223 (390)
.++.+.+. + .++.+++|++.............++.++ ++.+...++++.|+- ... +.++.+++++..+.++.
T Consensus 145 ~~~~~~~~--g---~~~~~~G~p~~~~~~~~~~~~~~~~~l~-~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~ 218 (380)
T PRK00025 145 EAAFYDKL--G---VPVTFVGHPLADAIPLLPDRAAARARLG-LDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRY 218 (380)
T ss_pred CHHHHHhc--C---CCeEEECcCHHHhcccccChHHHHHHcC-CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 88887663 2 2477777776443222122233444454 333334445555533 332 45788999999998776
Q ss_pred ccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHc-CCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHh
Q psy12587 224 SDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKL-KLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIE 302 (390)
Q Consensus 224 ~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~-~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~E 302 (390)
++ ++++++|+.+. +.+++++.++++ ++. +.+.. .++..+|+.||+++++| |.+.+|
T Consensus 219 ~~-----~~~ii~~~~~~-------~~~~~~~~~~~~~~~~--v~~~~----~~~~~~~~~aDl~v~~s-----G~~~lE 275 (380)
T PRK00025 219 PD-----LRFVLPLVNPK-------RREQIEEALAEYAGLE--VTLLD----GQKREAMAAADAALAAS-----GTVTLE 275 (380)
T ss_pred CC-----eEEEEecCChh-------hHHHHHHHHhhcCCCC--eEEEc----ccHHHHHHhCCEEEECc-----cHHHHH
Confidence 64 89999876322 126677777776 553 54432 36789999999999987 788889
Q ss_pred hhhcCCCEEEe-----------------cCCCcccceecCc--ceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHH
Q psy12587 303 AMFCKRPVIAV-----------------NSGGPKESVVDGR--TGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFN 362 (390)
Q Consensus 303 a~a~G~pvi~~-----------------~~~~~~e~i~~~~--~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~ 362 (390)
||++|+|+|++ +.+++++++.++. .+++.+. |++++++.+.++++|++ .+++|++++.+
T Consensus 276 a~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~~~~~ 354 (380)
T PRK00025 276 LALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGA-RRQALLEGFTE 354 (380)
T ss_pred HHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHH-HHHHHHHHHHH
Confidence 99999999987 3344556665543 4466666 99999999999999999 99999988755
Q ss_pred HHhhhcCHHHHHHHHHHHHHhhhh
Q psy12587 363 RFNEKFSFQAFSIQLNTIVNNMLD 386 (390)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~ 386 (390)
... ... ...++++.+.+.+.+.
T Consensus 355 ~~~-~~~-~~a~~~~~~~i~~~~~ 376 (380)
T PRK00025 355 LHQ-QLR-CGADERAAQAVLELLK 376 (380)
T ss_pred HHH-HhC-CCHHHHHHHHHHHHhh
Confidence 542 222 2244555555555443
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-20 Score=170.24 Aligned_cols=250 Identities=17% Similarity=0.124 Sum_probs=170.5
Q ss_pred Hhh-cCCCEEEEccccc-ch---hHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhH
Q psy12587 72 WYS-EKPDLVFCDLVSI-CI---PILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFT 146 (390)
Q Consensus 72 ~~~-~~~Dvi~~~~~~~-~~---~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~ 146 (390)
+++ .+||+||+|+... .+ .+++..++|++...|+...+.. .. ........+.+.+|.++++|+..
T Consensus 83 ~l~~~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~~--~~--------~~~~~r~~~~~~ad~~~~~s~~~ 152 (363)
T cd03786 83 VLLEEKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFDR--GM--------PDEENRHAIDKLSDLHFAPTEEA 152 (363)
T ss_pred HHHHhCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCCC--CC--------CchHHHHHHHHHhhhccCCCHHH
Confidence 344 8999999997432 22 2334445898865554221100 00 00111223456789999999999
Q ss_pred HHHHHHHhccCCCCceeecCCCC-CCCCCCCC-Cc-cchhhhcCCCCCCCCeEEEEeecccc---cCCHHHHHHHHHHHH
Q psy12587 147 KSVVQATFRSLDHKCLDILYPSV-YTEGLEKT-TP-EPIENVLNPLPGKEDIVFLSINRYER---KKNLELAIYSLNSLR 220 (390)
Q Consensus 147 ~~~~~~~~~~~~~~~~~vi~~~~-~~~~~~~~-~~-~~~~~~~~~l~~~~~~~i~~~g~~~~---~K~~~~ll~a~~~l~ 220 (390)
++.+.+. +.+.+++.+++|++ |...+... .. ...+..++ ++ ++++++++.|+... .|+++.++++++.+.
T Consensus 153 ~~~l~~~--G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~-~~-~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~ 228 (363)
T cd03786 153 RRNLLQE--GEPPERIFVVGNTMIDALLRLLELAKKELILELLG-LL-PKKYILVTLHRVENVDDGEQLEEILEALAELA 228 (363)
T ss_pred HHHHHHc--CCCcccEEEECchHHHHHHHHHHhhccchhhhhcc-cC-CCCEEEEEeCCccccCChHHHHHHHHHHHHHH
Confidence 9998875 46678899999985 43222111 11 11122232 22 35677788888764 799999999999886
Q ss_pred hhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCC-CCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCcc
Q psy12587 221 SRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKL-SDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIV 299 (390)
Q Consensus 221 ~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l-~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~ 299 (390)
+. + +.+++.|.+... +.+++.+.++++ .++|.+.|.....++..+|+.||++|.+|. ..
T Consensus 229 ~~--~-----~~vi~~~~~~~~--------~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ad~~v~~Sg-----gi 288 (363)
T cd03786 229 EE--D-----VPVVFPNHPRTR--------PRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKNADLVLTDSG-----GI 288 (363)
T ss_pred hc--C-----CEEEEECCCChH--------HHHHHHHHhhccCCCCEEEECCcCHHHHHHHHHcCcEEEEcCc-----cH
Confidence 53 2 677777766544 778888888776 678999999888999999999999999983 35
Q ss_pred HHhhhhcCCCEEEecC-CCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHH
Q psy12587 300 PIEAMFCKRPVIAVNS-GGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFS 357 (390)
Q Consensus 300 ~~Ea~a~G~pvi~~~~-~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~ 357 (390)
..|||++|+|+|+++. +..++.+++|. +..+..|+++++++|.++++++. .+..|+
T Consensus 289 ~~Ea~~~g~PvI~~~~~~~~~~~~~~g~-~~~~~~~~~~i~~~i~~ll~~~~-~~~~~~ 345 (363)
T cd03786 289 QEEASFLGVPVLNLRDRTERPETVESGT-NVLVGTDPEAILAAIEKLLSDEF-AYSLMS 345 (363)
T ss_pred HhhhhhcCCCEEeeCCCCccchhhheee-EEecCCCHHHHHHHHHHHhcCch-hhhcCC
Confidence 7899999999999875 44556665442 33333279999999999999887 665653
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.9e-20 Score=168.48 Aligned_cols=218 Identities=14% Similarity=0.145 Sum_probs=178.5
Q ss_pred hcCcceEEEccHhHHHHHHHHhccC-CCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEee--cccccCCH
Q psy12587 133 TCKADKIVVNSEFTKSVVQATFRSL-DHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSIN--RYERKKNL 209 (390)
Q Consensus 133 ~~~ad~ii~~s~~~~~~~~~~~~~~-~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g--~~~~~K~~ 209 (390)
+..+|.+|+.|+...+.+.+.++.. ...++..||.+.. ...... ....+..+++++ |+ +.|.+
T Consensus 270 ~~~~d~iIv~T~~q~~~l~~~~~~~~~~~~v~~Ip~~~~-~~~~~~------------s~r~~~~~I~v~idrL-~ek~~ 335 (519)
T TIGR03713 270 LSRADLIIVDREDIERLLEENYRENYVEFDISRITPFDT-RLRLGQ------------SQQLYETEIGFWIDGL-SDEEL 335 (519)
T ss_pred hhhcCeEEEcCHHHHHHHHHHhhhcccCCcceeeCccce-EEecCh------------hhcccceEEEEEcCCC-ChHHH
Confidence 5678999999988888787766521 1135667776543 111110 112334567777 99 99999
Q ss_pred HHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCC--------------------------
Q psy12587 210 ELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLS-------------------------- 263 (390)
Q Consensus 210 ~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~-------------------------- 263 (390)
+.+|+++.++..+.|+ ++|.+.|.+... .+...+++.++++++.
T Consensus 336 ~~~I~av~~~~~~~p~-----~~L~~~gy~~~~-----~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (519)
T TIGR03713 336 QQILQQLLQYILKNPD-----YELKILTYNNDN-----DITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQ 405 (519)
T ss_pred HHHHHHHHHHHhhCCC-----eEEEEEEecCch-----hHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhc
Confidence 9999999999999996 999999988542 3346677777777665
Q ss_pred ---CcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceecCcceeeecCCHHHHHH
Q psy12587 264 ---DNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAK 340 (390)
Q Consensus 264 ---~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~ 340 (390)
+.|.|.|..+..++.+.|..+.++|.+|..|+++ +.+||++.|+|+| .-|..+++.++.||+++. |..+|++
T Consensus 406 ~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d~~NG~li~-d~~~l~~ 480 (519)
T TIGR03713 406 KEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYVEHNKNGYIID-DISELLK 480 (519)
T ss_pred ccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee---ecCCceeeEcCCCcEEeC-CHHHHHH
Confidence 7899999999888899999999999999999999 9999999999999 456789999999999997 9999999
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHH
Q psy12587 341 AMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIV 381 (390)
Q Consensus 341 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
++..++.+++ .+.++...+.+.+ ++||-+.+.++|.+++
T Consensus 481 al~~~L~~~~-~wn~~~~~sy~~~-~~yS~~~i~~kW~~~~ 519 (519)
T TIGR03713 481 ALDYYLDNLK-NWNYSLAYSIKLI-DDYSSENIIERLNELI 519 (519)
T ss_pred HHHHHHhCHH-HHHHHHHHHHHHH-HHhhHHHHHHHHHhhC
Confidence 9999999999 9999999999998 8999999999998753
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-18 Score=166.83 Aligned_cols=295 Identities=13% Similarity=0.156 Sum_probs=203.3
Q ss_pred cCCCEEEEcccccchhHHHhhc----ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHH
Q psy12587 75 EKPDLVFCDLVSICIPILQAKQ----FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVV 150 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~~~~~----~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 150 (390)
..=|+|++|++...+....++. .++-++.|-|.+...... .+-. ...+ -..+-.||.|-+.+...+..+
T Consensus 230 ~~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Eifr----~LP~--r~el-L~glL~aDlIGFqT~~y~rhF 302 (934)
T PLN03064 230 EEGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHR----TLPS--RSEL-LRSVLAADLVGFHTYDYARHF 302 (934)
T ss_pred CCCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCChHHHh----hCCc--HHHH-HHHHhcCCeEEeCCHHHHHHH
Confidence 4447999999876554443332 788899997654222111 1000 0111 222447899999998888777
Q ss_pred HHHhc---cCC-----------CCceeecCCCCCCCCCCCCCc--------cchhhhcCCCCCCCCeEEEEeecccccCC
Q psy12587 151 QATFR---SLD-----------HKCLDILYPSVYTEGLEKTTP--------EPIENVLNPLPGKEDIVFLSINRYERKKN 208 (390)
Q Consensus 151 ~~~~~---~~~-----------~~~~~vi~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~i~~~g~~~~~K~ 208 (390)
.+... +.. ..++.+.|.|||++.|..... ..+++.+ .++.+|++++|+...||
T Consensus 303 l~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~-----~g~kiIlgVDRLD~~KG 377 (934)
T PLN03064 303 VSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERF-----AGRKVMLGVDRLDMIKG 377 (934)
T ss_pred HHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHh-----CCceEEEEeeccccccC
Confidence 75221 000 123667899999988764321 1334443 25678999999999999
Q ss_pred HHHHHHHHHHHHhhcccccccceEEEEEcCCCC-CCcchhHHHHHHHHHHHHcC-------CCCcEEEecCCChHHHHHH
Q psy12587 209 LELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDP-HNIENVEYYKELGVLVKKLK-------LSDNVLFLTSPSDAAKISL 280 (390)
Q Consensus 209 ~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~-~~~~~~~y~~~~~~~~~~~~-------l~~~v~~~g~~~~~e~~~~ 280 (390)
+...+.|+..+.+++|+ ...++.|+-+..... ..++.+.+..++.+++.+.+ ..+-+.+...++.+++..+
T Consensus 378 I~~kL~AfE~fL~~~Pe-~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~Al 456 (934)
T PLN03064 378 IPQKILAFEKFLEENPE-WRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCAL 456 (934)
T ss_pred HHHHHHHHHHHHHhCcc-ccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHH
Confidence 99999999999888885 112344554442221 11122333344544444432 1122334455899999999
Q ss_pred HHhcceEEeCCCCCCCCccHHhhhhcCC----CEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHH
Q psy12587 281 FKFCHCIIYTPSNEHFGIVPIEAMFCKR----PVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQ 355 (390)
Q Consensus 281 ~~~adv~v~ps~~e~~~~~~~Ea~a~G~----pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~ 355 (390)
|+.||++++||..||++++..|||+|+. ++|.|...|..+.+ +..+++++| |.++++++|.++++.+.++++.
T Consensus 457 Y~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L--~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~ 534 (934)
T PLN03064 457 YAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVAASIAQALNMPEEEREK 534 (934)
T ss_pred HHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh--CCceEEECCCCHHHHHHHHHHHHhCCHHHHHH
Confidence 9999999999999999999999999954 45558888888777 446899999 9999999999999966658888
Q ss_pred HHHHHHHHHhhhcCHHHHHHHHHHHHHhhh
Q psy12587 356 FSQFGFNRFNEKFSFQAFSIQLNTIVNNML 385 (390)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
+.+..++.+ ..+++..+++.+++-+.++.
T Consensus 535 r~~~~~~~V-~~~d~~~Wa~~fl~~L~~~~ 563 (934)
T PLN03064 535 RHRHNFMHV-TTHTAQEWAETFVSELNDTV 563 (934)
T ss_pred HHHHHHhhc-ccCCHHHHHHHHHHHHHHHH
Confidence 888899988 78999999999988877664
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.5e-18 Score=158.41 Aligned_cols=302 Identities=14% Similarity=0.099 Sum_probs=218.0
Q ss_pred cCCCEEEEcccccchhHHHh-----------------hcccEEEEeecCCcccc--chhhhhhhh---------------
Q psy12587 75 EKPDLVFCDLVSICIPILQA-----------------KQFKVLFYCHYPDQLLS--KQGSFLKSI--------------- 120 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~~~-----------------~~~~~v~~~h~~~~~~~--~~~~~~~~~--------------- 120 (390)
.+||+||+|.+.+++....+ .+.++++|+|++..... .......+.
T Consensus 160 ~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~gl~~~~~ 239 (601)
T TIGR02094 160 IDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLGLPREQL 239 (601)
T ss_pred CCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhCCCHHHH
Confidence 79999999998776644331 12678999998755332 111111100
Q ss_pred ---cccc-----hhhHHHHHhcCcceEEEccHhHHHHHHHHhcc----CC--CCceeecCCCCCCCCCCCCCccc-----
Q psy12587 121 ---YRFP-----LNKLEEWTTCKADKIVVNSEFTKSVVQATFRS----LD--HKCLDILYPSVYTEGLEKTTPEP----- 181 (390)
Q Consensus 121 ---~~~~-----~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~----~~--~~~~~vi~~~~~~~~~~~~~~~~----- 181 (390)
.... .-.+.+..+..||.+.++|+...+...+.++. .+ ..++.-|-|||+...+.+.....
T Consensus 240 ~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~~~~~~~~i~gItNGId~~~W~~~~~~~l~~~y 319 (601)
T TIGR02094 240 LALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPGYEEEEVPIGYVTNGVHNPTWVAPELRDLYERY 319 (601)
T ss_pred HhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhhcccccCCccceeCCccccccCCHHHHHHHHHh
Confidence 0000 01445677889999999999888754443322 11 23478889999998666422100
Q ss_pred -------------------------h-------hhhcCC------------------------C-CCCCCeEEEEeeccc
Q psy12587 182 -------------------------I-------ENVLNP------------------------L-PGKEDIVFLSINRYE 204 (390)
Q Consensus 182 -------------------------~-------~~~~~~------------------------l-~~~~~~~i~~~g~~~ 204 (390)
+ +..+.+ + ...+.+.+++++|+.
T Consensus 320 ~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~dpd~~~ig~v~Rl~ 399 (601)
T TIGR02094 320 LGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRFLDPDVLTIGFARRFA 399 (601)
T ss_pred CCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccccCCCCcEEEEEEcch
Confidence 0 001100 0 123567899999999
Q ss_pred ccCCHHHHHHHHHHHHh--hcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHH
Q psy12587 205 RKKNLELAIYSLNSLRS--RLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFK 282 (390)
Q Consensus 205 ~~K~~~~ll~a~~~l~~--~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~ 282 (390)
.+||.+.++.++.++.+ ..|+ .+++|++.|.+.+.....+.+.+.+..++++...+++|.|+-..+..-...+++
T Consensus 400 ~yKr~dLil~~i~~l~~i~~~~~---~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f~~~Yd~~lA~~i~a 476 (601)
T TIGR02094 400 TYKRADLIFRDLERLARILNNPE---RPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVFLENYDINLARYLVS 476 (601)
T ss_pred hhhhHHHHHHHHHHHHHHhhCCC---CCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEEEEcCCCHHHHHHHhh
Confidence 99999999999888864 2211 138999999998877777788888988888755677899987777766688999
Q ss_pred hcceEEe-CCC-CCCCCccHHhhhhcCCCEEEecCCCcccceecCcceeeec------------C-CHHHHHHHHHHHh-
Q psy12587 283 FCHCIIY-TPS-NEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCE------------S-NEEAFAKAMKKIV- 346 (390)
Q Consensus 283 ~adv~v~-ps~-~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~------------~-~~~~l~~~i~~l~- 346 (390)
.||++++ ||. +|.+|++-+-||..|.+.+++-.|...|.. ++.||+.+. . |+++|.++|++.+
T Consensus 477 G~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~ 555 (601)
T TIGR02094 477 GVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVI 555 (601)
T ss_pred hheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccccccccccCCCHHHHHHHHHHHHH
Confidence 9999999 999 999999999999999999999888888876 567999997 5 8999999987655
Q ss_pred ----cC-----ChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHH
Q psy12587 347 ----DN-----DGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIV 381 (390)
Q Consensus 347 ----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
++ |. .+.++.+++.......|||++++++|.+.|
T Consensus 556 ~~yy~~~~~~~p~-~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 556 PLYYDRDEKGIPA-DWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred HHHhcCCcccCcH-HHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 23 34 577777777766556899999999999876
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-18 Score=154.67 Aligned_cols=309 Identities=11% Similarity=0.048 Sum_probs=182.0
Q ss_pred hh-HhhhhcCCceeec--C-Cccccc-cCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cCCCEEEEcc
Q psy12587 11 TA-TAWGATGPRTTAH--D-HCFKET-KDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EKPDLVFCDL 84 (390)
Q Consensus 11 ~l-~~L~~~G~~V~~~--~-~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dvi~~~~ 84 (390)
.+ ++|.++|++|.++ + ....+. ....+++..+.. ......+..+...++.+. ... .+++ .+||+|+.++
T Consensus 23 al~~~l~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~v---~G~~~~l~~~~~~~~~~~-~~~-~~l~~~kPd~vi~~g 97 (385)
T TIGR00215 23 GLRQQLKEHYPNARFIGVAGPRMAAEGCEVLYSMEELSV---MGLREVLGRLGRLLKIRK-EVV-QLAKQAKPDLLVGID 97 (385)
T ss_pred HHHHHHHhcCCCcEEEEEccHHHHhCcCccccChHHhhh---ccHHHHHHHHHHHHHHHH-HHH-HHHHhcCCCEEEEeC
Confidence 88 9999999998887 2 222111 111122222210 000112222222222222 111 3455 9999999998
Q ss_pred cccchh-----HHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHHhccCCC
Q psy12587 85 VSICIP-----ILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDH 159 (390)
Q Consensus 85 ~~~~~~-----~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~ 159 (390)
. .+++ .++..++|+++++ .|..|.+... ..+.+.+.+|.+++.++...+.+.+. .
T Consensus 98 ~-~~~~~~~a~aa~~~gip~v~~i-~P~~waw~~~-------------~~r~l~~~~d~v~~~~~~e~~~~~~~-----g 157 (385)
T TIGR00215 98 A-PDFNLTKELKKKDPGIKIIYYI-SPQVWAWRKW-------------RAKKIEKATDFLLAILPFEKAFYQKK-----N 157 (385)
T ss_pred C-CCccHHHHHHHhhCCCCEEEEe-CCcHhhcCcc-------------hHHHHHHHHhHhhccCCCcHHHHHhc-----C
Confidence 5 3322 2334459998766 4444333211 13455678999999999988887653 2
Q ss_pred CceeecCCCCCCCCCCC-CCccchhhhcCCCCCCCCeEEEEee-cccc-cCCHHHHHHHHHHHHhhcccccccceEEEEE
Q psy12587 160 KCLDILYPSVYTEGLEK-TTPEPIENVLNPLPGKEDIVFLSIN-RYER-KKNLELAIYSLNSLRSRLSDEMKTHVKLVVA 236 (390)
Q Consensus 160 ~~~~vi~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~i~~~g-~~~~-~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~ 236 (390)
.+..+++|++....... ......++.++ ++.+.+.++++.| |..+ .|++..+++++..+.+..|+ +++++.
T Consensus 158 ~~~~~vGnPv~~~~~~~~~~~~~~r~~lg-l~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~-----~~~vi~ 231 (385)
T TIGR00215 158 VPCRFVGHPLLDAIPLYKPDRKSAREKLG-IDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPD-----LRRVLP 231 (385)
T ss_pred CCEEEECCchhhhccccCCCHHHHHHHcC-CCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCC-----eEEEEE
Confidence 36677888874332211 12233444554 3443344444444 4444 68999999999999887775 887665
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecC-
Q psy12587 237 GGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS- 315 (390)
Q Consensus 237 G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~- 315 (390)
+..... .+.+++..+.++....|.+.+. ++..+|+.||++|++| |.+.+|+|++|+|+|....
T Consensus 232 ~~~~~~-------~~~~~~~~~~~~~~~~v~~~~~----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~ 295 (385)
T TIGR00215 232 VVNFKR-------RLQFEQIKAEYGPDLQLHLIDG----DARKAMFAADAALLAS-----GTAALEAALIKTPMVVGYRM 295 (385)
T ss_pred eCCchh-------HHHHHHHHHHhCCCCcEEEECc----hHHHHHHhCCEEeecC-----CHHHHHHHHcCCCEEEEEcC
Confidence 433211 1556666666665556665542 3467999999999998 7777899999999988731
Q ss_pred CCc----------------ccceecCcce-eee-cC-CHHHHHHHHHHHhcCC----hhHHHHHHHHHHHHHhhhc
Q psy12587 316 GGP----------------KESVVDGRTG-FLC-ES-NEEAFAKAMKKIVDND----GNIIQQFSQFGFNRFNEKF 368 (390)
Q Consensus 316 ~~~----------------~e~i~~~~~g-~~~-~~-~~~~l~~~i~~l~~~~----~~~~~~~~~~~~~~~~~~~ 368 (390)
..+ +.++.+.... .+. .. +++.+++.+.++++|+ + .++++.+...+. .+..
T Consensus 296 ~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~-~~~~~~~~~~~~-~~~l 369 (385)
T TIGR00215 296 KPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENGLKAYK-EMHRERQFFEEL-RQRI 369 (385)
T ss_pred CHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCCcccHH-HHHHHHHHHHHH-HHHh
Confidence 111 2222222211 112 33 7899999999999999 7 777776555444 2444
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.6e-19 Score=137.34 Aligned_cols=132 Identities=25% Similarity=0.343 Sum_probs=97.0
Q ss_pred CeEEEEeecccccCCHHHHHH-HHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCC
Q psy12587 194 DIVFLSINRYERKKNLELAIY-SLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSP 272 (390)
Q Consensus 194 ~~~i~~~g~~~~~K~~~~ll~-a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~ 272 (390)
-++|++.|++.+.|+++.+++ ++.++.++.|+ ++|+|+|.++ ++++++ ..++|.++|++
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~-----~~l~i~G~~~----------~~l~~~-----~~~~v~~~g~~ 61 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPD-----IELIIIGNGP----------DELKRL-----RRPNVRFHGFV 61 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTT-----EEEEEECESS-----------HHCCH-----HHCTEEEE-S-
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcC-----EEEEEEeCCH----------HHHHHh-----cCCCEEEcCCH
Confidence 467899999999999999999 99999999886 9999999965 334443 13689999999
Q ss_pred ChHHHHHHHHhcceEEeCCC-CCCCCccHHhhhhcCCCEEEecCCCcccceecCcceeeecCCHHHHHHHHHHHhcC
Q psy12587 273 SDAAKISLFKFCHCIIYTPS-NEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDN 348 (390)
Q Consensus 273 ~~~e~~~~~~~adv~v~ps~-~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~ 348 (390)
+++.++++.||+++.|+. .+++|.+++|||++|+|||+++. +..++......|.++..|+++++++|.++++|
T Consensus 62 --~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 62 --EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLVANDPEELAEAIERLLND 135 (135)
T ss_dssp --HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE-TT-HHHHHHHHHHHHH-
T ss_pred --HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEECCCHHHHHHHHHHHhcC
Confidence 588999999999999985 67899999999999999999998 56666665566767633999999999999875
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.4e-15 Score=131.67 Aligned_cols=321 Identities=13% Similarity=0.056 Sum_probs=194.3
Q ss_pred CCcchhhhHhh-HhhhhcCCc-eeec--CCcc--ccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHH-HHHhh
Q psy12587 2 LGATARLTITA-TAWGATGPR-TTAH--DHCF--KETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALY-VAWYS 74 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~-V~~~--~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 74 (390)
+||.-.....+ ++|.++|++ |.+. +... ......++.++.++....+.. ..+..+...++.+..... ..+++
T Consensus 10 TGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~l~~~~~~~~~~I~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~il~ 88 (357)
T COG0707 10 TGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAFLVKQYGIEFELIPSGGLRRK-GSLKLLKAPFKLLKGVLQARKILK 88 (357)
T ss_pred CccchhHHHHHHHHHHhhCccEEEEecccccceeeeccccCceEEEEeccccccc-CcHHHHHHHHHHHHHHHHHHHHHH
Confidence 57888888899 999999995 5555 2212 222233556666643222221 111223222332222222 14566
Q ss_pred -cCCCEEEEcccccchhHH---HhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHH
Q psy12587 75 -EKPDLVFCDLVSICIPIL---QAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVV 150 (390)
Q Consensus 75 -~~~Dvi~~~~~~~~~~~~---~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 150 (390)
.+||+|+..+...+.+.. ...++|++.+..+... ....++..+.|+.|.+.-+. .
T Consensus 89 ~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~-----------------G~ank~~~~~a~~V~~~f~~----~ 147 (357)
T COG0707 89 KLKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVP-----------------GLANKILSKFAKKVASAFPK----L 147 (357)
T ss_pred HcCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCc-----------------chhHHHhHHhhceeeecccc----c
Confidence 999999998865555443 4444888876665321 12224445667777765543 1
Q ss_pred HHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccc
Q psy12587 151 QATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTH 230 (390)
Q Consensus 151 ~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~ 230 (390)
.. ..+.+++.+..+++..+... .+....+... ..+...++++-|+.....--+.+.++...+.++
T Consensus 148 ~~---~~~~~~~~~tG~Pvr~~~~~-~~~~~~~~~~---~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~~-------- 212 (357)
T COG0707 148 EA---GVKPENVVVTGIPVRPEFEE-LPAAEVRKDG---RLDKKTILVTGGSQGAKALNDLVPEALAKLANR-------- 212 (357)
T ss_pred cc---cCCCCceEEecCcccHHhhc-cchhhhhhhc---cCCCcEEEEECCcchhHHHHHHHHHHHHHhhhC--------
Confidence 12 22256799999999887766 3222222221 222444555555554444334444444455442
Q ss_pred eEE-EEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCC
Q psy12587 231 VKL-VVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRP 309 (390)
Q Consensus 231 ~~l-~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~p 309 (390)
+.+ +++|... . +++++...+++. +...++.++ |..+|+.||++|+=+ .++++.|..++|+|
T Consensus 213 ~~v~~~~G~~~-~--------~~~~~~~~~~~~---~~v~~f~~d--m~~~~~~ADLvIsRa----Ga~Ti~E~~a~g~P 274 (357)
T COG0707 213 IQVIHQTGKND-L--------EELKSAYNELGV---VRVLPFIDD--MAALLAAADLVISRA----GALTIAELLALGVP 274 (357)
T ss_pred eEEEEEcCcch-H--------HHHHHHHhhcCc---EEEeeHHhh--HHHHHHhccEEEeCC----cccHHHHHHHhCCC
Confidence 554 4455442 2 566666666554 778888876 589999999999644 56899999999999
Q ss_pred EEEecCCCc--------ccceecCcceeeecC---CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHH
Q psy12587 310 VIAVNSGGP--------KESVVDGRTGFLCES---NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLN 378 (390)
Q Consensus 310 vi~~~~~~~--------~e~i~~~~~g~~~~~---~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (390)
+|--+.+.. ...+.+...|.+++. +++++.+.|.+++++++ ..++|.+++++.. ..-..+.+++...
T Consensus 275 ~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~-~l~~m~~~a~~~~-~p~aa~~i~~~~~ 352 (357)
T COG0707 275 AILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPE-KLKAMAENAKKLG-KPDAAERIADLLL 352 (357)
T ss_pred EEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHH-HHHHHHHHHHhcC-CCCHHHHHHHHHH
Confidence 999765332 234455566777765 58899999999999988 9999999988776 4444444444444
Q ss_pred H
Q psy12587 379 T 379 (390)
Q Consensus 379 ~ 379 (390)
.
T Consensus 353 ~ 353 (357)
T COG0707 353 A 353 (357)
T ss_pred H
Confidence 3
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.6e-15 Score=134.16 Aligned_cols=297 Identities=13% Similarity=0.149 Sum_probs=179.3
Q ss_pred HHhh--cCCCEEEEcccccchhHHHhhc----ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccH
Q psy12587 71 AWYS--EKPDLVFCDLVSICIPILQAKQ----FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSE 144 (390)
Q Consensus 71 ~~~~--~~~Dvi~~~~~~~~~~~~~~~~----~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~ 144 (390)
.+.+ ..-|+|++|+....+....+.. .++.+..|-|.+.... ++.+ . ....+ -..+-.||.|-+.+.
T Consensus 134 ~i~~~~~~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e~----fr~l-P-~r~ei-L~glL~aDlIgFqt~ 206 (474)
T PF00982_consen 134 AIAEVYRPGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSSEI----FRCL-P-WREEI-LRGLLGADLIGFQTF 206 (474)
T ss_dssp HHGGG--TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----HHH----HTTS-T-THHHH-HHHHTTSSEEEESSH
T ss_pred HHHHhCcCCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCHHH----HhhC-C-cHHHH-HHHhhcCCEEEEecH
Confidence 4455 7788999999776554433322 8888999976542211 1110 0 01111 222457899999999
Q ss_pred hHHHHHHHHhccC-----C-----------CCceeecCCCCCCCCCCCCC--------ccchhhhcCCCCCCCCeEEEEe
Q psy12587 145 FTKSVVQATFRSL-----D-----------HKCLDILYPSVYTEGLEKTT--------PEPIENVLNPLPGKEDIVFLSI 200 (390)
Q Consensus 145 ~~~~~~~~~~~~~-----~-----------~~~~~vi~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~i~~~ 200 (390)
..++.+....... . .-++.+.|-|||++.+.... ...+++.++ ++..+|+.+
T Consensus 207 ~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~----~~~~ii~gv 282 (474)
T PF00982_consen 207 EYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFK----GKRKIIVGV 282 (474)
T ss_dssp HHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHHHHHTT----T-SEEEEEE
T ss_pred HHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcC----CCcEEEEEe
Confidence 8888776532110 0 12367788899987665311 123444442 235889999
Q ss_pred ecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCC-CcchhHHHHHHHHHHHHc----CC---CCcEEEecCC
Q psy12587 201 NRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPH-NIENVEYYKELGVLVKKL----KL---SDNVLFLTSP 272 (390)
Q Consensus 201 g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~-~~~~~~y~~~~~~~~~~~----~l---~~~v~~~g~~ 272 (390)
.|++..||+..=+.|+.++.+++|+ ...++.|+-++..... ....+.+..++.+++.+. |- .+-+.+.+.+
T Consensus 283 Drld~~kGi~~kl~Afe~fL~~~P~-~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~ 361 (474)
T PF00982_consen 283 DRLDYTKGIPEKLRAFERFLERYPE-YRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSL 361 (474)
T ss_dssp --B-GGG-HHHHHHHHHHHHHH-GG-GTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S--
T ss_pred ccchhhcCHHHHHHHHHHHHHhCcC-ccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCC
Confidence 9999999999999999999999996 4457888777753322 122345556666666543 32 2234456679
Q ss_pred ChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCC----EEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhc
Q psy12587 273 SDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRP----VIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVD 347 (390)
Q Consensus 273 ~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~p----vi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~ 347 (390)
+.+++..+|+.||+++.+|..+|+.++..|+.+|..+ +|.|...|..+.+.+ ..++++| |.+++|++|.++++
T Consensus 362 ~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~--~al~VNP~d~~~~A~ai~~AL~ 439 (474)
T PF00982_consen 362 SFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSE--AALLVNPWDIEEVADAIHEALT 439 (474)
T ss_dssp -HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-TT--S-EEE-TT-HHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHcCC--ccEEECCCChHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999765 777888888887743 3489999 99999999999999
Q ss_pred CChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q psy12587 348 NDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVN 382 (390)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
.+.++++...+..++.+ ..++...+++.+++-++
T Consensus 440 M~~~Er~~r~~~~~~~v-~~~~~~~W~~~~l~~L~ 473 (474)
T PF00982_consen 440 MPPEERKERHARLREYV-REHDVQWWAESFLRDLK 473 (474)
T ss_dssp --HHHHHHHHHHHHHHH-HHT-HHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHh-HhCCHHHHHHHHHHHhh
Confidence 99867777777778877 78999999999988765
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.7e-16 Score=138.87 Aligned_cols=305 Identities=16% Similarity=0.174 Sum_probs=172.7
Q ss_pred EEEEcccccchhHHHhh--c--ccEEEEeecCCccccc---hhhhhhhh------------cccchhhHHHHHhcCcceE
Q psy12587 79 LVFCDLVSICIPILQAK--Q--FKVLFYCHYPDQLLSK---QGSFLKSI------------YRFPLNKLEEWTTCKADKI 139 (390)
Q Consensus 79 vi~~~~~~~~~~~~~~~--~--~~~v~~~h~~~~~~~~---~~~~~~~~------------~~~~~~~~~~~~~~~ad~i 139 (390)
+.|+|.|.+++.++.+. . +..|+|.|..-.-..- ...+...+ --.-...+|+.+...||.+
T Consensus 146 iaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~AdvF 225 (633)
T PF05693_consen 146 IAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADVF 225 (633)
T ss_dssp EEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSEE
T ss_pred EEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCee
Confidence 33777787665544433 3 8899999953211000 00000000 0001236788889999999
Q ss_pred EEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCc---------cch----hhh-cCC--CCCCCCeEEEEeecc
Q psy12587 140 VVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTP---------EPI----ENV-LNP--LPGKEDIVFLSINRY 203 (390)
Q Consensus 140 i~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~---------~~~----~~~-~~~--l~~~~~~~i~~~g~~ 203 (390)
.++|+-++.+....++ ..+-.|+|||++.+.++.... ..+ +.. ++. +..++.+.|...||.
T Consensus 226 TTVSeITa~Ea~~LL~---r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRY 302 (633)
T PF05693_consen 226 TTVSEITAKEAEHLLK---RKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRY 302 (633)
T ss_dssp EESSHHHHHHHHHHHS---S--SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS
T ss_pred eehhhhHHHHHHHHhC---CCCCEEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCccceEEEEeeece
Confidence 9999999999998776 346688999999988776532 111 111 111 122356788899999
Q ss_pred c-ccCCHHHHHHHHHHHHhhccc-cc-ccceEEEEEcCCCCCC----cchhH----------------------------
Q psy12587 204 E-RKKNLELAIYSLNSLRSRLSD-EM-KTHVKLVVAGGYDPHN----IENVE---------------------------- 248 (390)
Q Consensus 204 ~-~~K~~~~ll~a~~~l~~~~~~-~~-~~~~~l~i~G~~~~~~----~~~~~---------------------------- 248 (390)
+ .+||+|.+|+|+.+|...... .. ..=+-|+|+-...... ..++.
T Consensus 303 Ef~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~ 382 (633)
T PF05693_consen 303 EFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGR 382 (633)
T ss_dssp -TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred eeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 7 799999999999988543210 00 0013355544332210 00000
Q ss_pred ---------------------------------------HHHHHHHHHHHcCC----CCc--EEEecC-CC------hHH
Q psy12587 249 ---------------------------------------YYKELGVLVKKLKL----SDN--VLFLTS-PS------DAA 276 (390)
Q Consensus 249 ---------------------------------------y~~~~~~~~~~~~l----~~~--v~~~g~-~~------~~e 276 (390)
-.+.+...++++++ .++ |.|++. ++ +.+
T Consensus 383 ~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~ 462 (633)
T PF05693_consen 383 LPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLD 462 (633)
T ss_dssp S-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-
T ss_pred CCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCC
Confidence 11222233333333 123 344432 21 235
Q ss_pred HHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceec-----CcceeeecC----CH----HHHHHHHH
Q psy12587 277 KISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVD-----GRTGFLCES----NE----EAFAKAMK 343 (390)
Q Consensus 277 ~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~-----~~~g~~~~~----~~----~~l~~~i~ 343 (390)
..+++..||+.|+||.+|+||.+.+|+.++|+|.|+|+..|+...+.+ ...|+.+-. +. +++++.|.
T Consensus 463 Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~ 542 (633)
T PF05693_consen 463 YYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLY 542 (633)
T ss_dssp HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHH
T ss_pred HHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999888655543 335655522 44 45555555
Q ss_pred HHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhhh
Q psy12587 344 KIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDK 387 (390)
Q Consensus 344 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (390)
++......++..++.++.+.. +..+|+.+...|.+.++-++++
T Consensus 543 ~f~~~~~rqri~~Rn~ae~LS-~~~dW~~~~~yY~~Ay~~AL~~ 585 (633)
T PF05693_consen 543 KFCQLSRRQRIIQRNRAERLS-DLADWKNFGKYYEKAYDLALRR 585 (633)
T ss_dssp HHHT--HHHHHHHHHHHHHHG-GGGBHHHHCHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHh
Confidence 555555436777777776665 8999999999999999887765
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=9.2e-15 Score=130.96 Aligned_cols=295 Identities=9% Similarity=0.120 Sum_probs=207.2
Q ss_pred cCCCEEEEcccccchhHHHhhc----ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHH
Q psy12587 75 EKPDLVFCDLVSICIPILQAKQ----FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVV 150 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~~~~~----~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 150 (390)
..-|+|++|+....+....+.. .++-++.|-|.+.... ++.+-. ...+ -..+-.+|.|-+.+...++.+
T Consensus 122 ~~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs~ei----fr~LP~--r~ei-l~glL~aDlIGFqt~~y~rnF 194 (474)
T PRK10117 122 KDDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTPEI----FNALPP--HDEL-LEQLCDYDLLGFQTENDRLAF 194 (474)
T ss_pred CCCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCChHH----HhhCCC--hHHH-HHHHHhCccceeCCHHHHHHH
Confidence 4458999999876554433332 7888999976542221 111100 0111 122446899999998888777
Q ss_pred HHHhcc---C------------CCCceeecCCCCCCCCCCCCCc-------cchhhhcCCCCCCCCeEEEEeecccccCC
Q psy12587 151 QATFRS---L------------DHKCLDILYPSVYTEGLEKTTP-------EPIENVLNPLPGKEDIVFLSINRYERKKN 208 (390)
Q Consensus 151 ~~~~~~---~------------~~~~~~vi~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~i~~~g~~~~~K~ 208 (390)
.+.... . ..-++.+.|-|||++.+..... ..+++.+ .++.+|+.+.|++..||
T Consensus 195 l~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~~~~~~~~~lr~~~-----~~~~lilgVDRLDytKG 269 (474)
T PRK10117 195 LDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQLKAEL-----KNVQNIFSVERLDYSKG 269 (474)
T ss_pred HHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhchHHHHHHHHHHHc-----CCCeEEEEecccccccC
Confidence 753211 0 0123667788999877654221 1223332 25678899999999999
Q ss_pred HHHHHHHHHHHHhhcccccccceEEEEEcCCCC-CCcchhHHHHHHHHHHHHc----CC---CCcEEEecCCChHHHHHH
Q psy12587 209 LELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDP-HNIENVEYYKELGVLVKKL----KL---SDNVLFLTSPSDAAKISL 280 (390)
Q Consensus 209 ~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~-~~~~~~~y~~~~~~~~~~~----~l---~~~v~~~g~~~~~e~~~~ 280 (390)
+..=+.|+..+.+++|+ ...++.|+-+....- ...+.+++..++++++.+. |- .+-..+...++.+++..+
T Consensus 270 i~~rl~Afe~fL~~~Pe-~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~al 348 (474)
T PRK10117 270 LPERFLAYEALLEKYPQ-HHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKI 348 (474)
T ss_pred HHHHHHHHHHHHHhChh-hcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHH
Confidence 99999999999999996 445677776653321 1222345556666666553 21 122333466899999999
Q ss_pred HHhcceEEeCCCCCCCCccHHhhhhcCC-----CEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHH
Q psy12587 281 FKFCHCIIYTPSNEHFGIVPIEAMFCKR-----PVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQ 354 (390)
Q Consensus 281 ~~~adv~v~ps~~e~~~~~~~Ea~a~G~-----pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~ 354 (390)
|+.||+++.++..||+.++..|+.+|.. ++|.|...|..+.+. ..++++| |.++++++|.+.++.+.++++
T Consensus 349 yr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~---~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~ 425 (474)
T PRK10117 349 FRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYDRDEVAAALDRALTMPLAERI 425 (474)
T ss_pred HHhccEEEecccccccccccchheeeecCCCCccEEEecccchHHHhC---CCeEECCCCHHHHHHHHHHHHcCCHHHHH
Confidence 9999999999999999999999999976 378899888887773 4689999 999999999999999986777
Q ss_pred HHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhh
Q psy12587 355 QFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLD 386 (390)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (390)
+.-+..++.+ ..++...+++.+++-+..+..
T Consensus 426 ~R~~~l~~~v-~~~dv~~W~~~fL~~L~~~~~ 456 (474)
T PRK10117 426 SRHAEMLDVI-VKNDINHWQECFISDLKQIVP 456 (474)
T ss_pred HHHHHHHHHh-hhCCHHHHHHHHHHHHHHhhh
Confidence 7767777777 789999999999998877643
|
|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=99.71 E-value=8e-15 Score=139.29 Aligned_cols=305 Identities=14% Similarity=0.113 Sum_probs=213.7
Q ss_pred cCCCEEEEcccccchhHH-----Hh-------------hcccEEEEeecCCccc--cchhhhhhhh--------------
Q psy12587 75 EKPDLVFCDLVSICIPIL-----QA-------------KQFKVLFYCHYPDQLL--SKQGSFLKSI-------------- 120 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~-----~~-------------~~~~~v~~~h~~~~~~--~~~~~~~~~~-------------- 120 (390)
.+||+||+|.+++++... .+ .+..+++|+|++.... ........+.
T Consensus 247 ~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl~~~~ 326 (778)
T cd04299 247 IKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGLSRDR 326 (778)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCCCHHH
Confidence 689999999987766444 11 1267899999875433 1111111110
Q ss_pred -c---ccc------hhhHHHHHhcCcceEEEccHhHHHHHHHH----hccCC--CCceeecCCCCCCCCCC-CC------
Q psy12587 121 -Y---RFP------LNKLEEWTTCKADKIVVNSEFTKSVVQAT----FRSLD--HKCLDILYPSVYTEGLE-KT------ 177 (390)
Q Consensus 121 -~---~~~------~~~~~~~~~~~ad~ii~~s~~~~~~~~~~----~~~~~--~~~~~vi~~~~~~~~~~-~~------ 177 (390)
. ... .-.+.+..+..|+.+.++|+-..+..++. +++.+ ..++.-|-|||+...+. +.
T Consensus 327 ~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~~~~~i~~ITNGVh~~~W~~P~~~~l~~ 406 (778)
T cd04299 327 FLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPVEEVPIGHVTNGVHVPTWVAPEMRELYD 406 (778)
T ss_pred HhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCcccCceeceeCCcchhhhcCHHHHHHHH
Confidence 0 000 01445677899999999999875444443 33332 23688899999887665 11
Q ss_pred -----------------------Cc-----------cchhhhc---------------------CCCCCCCCeEEEEeec
Q psy12587 178 -----------------------TP-----------EPIENVL---------------------NPLPGKEDIVFLSINR 202 (390)
Q Consensus 178 -----------------------~~-----------~~~~~~~---------------------~~l~~~~~~~i~~~g~ 202 (390)
+. ..+.+.+ +..-+.+.+++++++|
T Consensus 407 ~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~~~~ldpd~ltigfarR 486 (778)
T cd04299 407 RYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIGEADDVLDPNVLTIGFARR 486 (778)
T ss_pred HhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhhhcCCccCCCccEEeeeec
Confidence 00 0000010 0001124568999999
Q ss_pred ccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHH
Q psy12587 203 YERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFK 282 (390)
Q Consensus 203 ~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~ 282 (390)
+..+|+.++++..+.++.+-..+ ....+.|++.|.+.+....++.+.+.+.++++....+++|.|+...+-.-...+++
T Consensus 487 fa~YKR~~Lil~dl~rl~~il~~-~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvfle~Yd~~lA~~Lva 565 (778)
T cd04299 487 FATYKRATLLLRDPERLKRLLND-PERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVFLEDYDMALARHLVQ 565 (778)
T ss_pred chhhhhHHHHHHHHHHHHHHhhC-CCCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEEEcCCCHHHHHHHHh
Confidence 99999999999998877541100 00139999999999887777888888888888666678999988777766688999
Q ss_pred hcceEEeCCC--CCCCCccHHhhhhcCCCEEEecCCCcccceecCcceeeecC-------------CHHHHHHHHHHH--
Q psy12587 283 FCHCIIYTPS--NEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-------------NEEAFAKAMKKI-- 345 (390)
Q Consensus 283 ~adv~v~ps~--~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-------------~~~~l~~~i~~l-- 345 (390)
.||+.+.||. .|.+|++=+-||..|.+-+++--|...|.. ++.||+.+.+ ++++|.+.+++.
T Consensus 566 G~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~ 644 (778)
T cd04299 566 GVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVI 644 (778)
T ss_pred hhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCccccChhhcchhhHHHHHHHHHHHHH
Confidence 9999999999 899999999999999999999988888877 7789999864 345555666442
Q ss_pred --hcC------ChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q psy12587 346 --VDN------DGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVN 382 (390)
Q Consensus 346 --~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
.-+ |. .+.+|.+++...+...|||++++++|.+-+-
T Consensus 645 p~yy~r~~~g~p~-~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 645 PLFYDRDEGGYPP-GWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred HHHhcCCCCCCCH-HHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 223 56 6888888887777789999999999987553
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.68 E-value=6.1e-14 Score=135.94 Aligned_cols=301 Identities=14% Similarity=0.149 Sum_probs=208.0
Q ss_pred HHhh-cCC--CEEEEcccccchhHHHhhc----ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEcc
Q psy12587 71 AWYS-EKP--DLVFCDLVSICIPILQAKQ----FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNS 143 (390)
Q Consensus 71 ~~~~-~~~--Dvi~~~~~~~~~~~~~~~~----~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s 143 (390)
.+.+ .++ |+|++|++...+....+++ .++-++.|-|.+..... +.+ ..+.-.-..+-.||.|-+.+
T Consensus 193 ~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~eif----r~L---P~r~eiL~glL~aDlIGFht 265 (854)
T PLN02205 193 RIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY----KTL---PIREELLRALLNSDLIGFHT 265 (854)
T ss_pred HHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChHHH----hhC---CcHHHHHHHHhcCCeEEecC
Confidence 3445 555 8999999876554433333 78889999765422111 110 01111122245789999999
Q ss_pred HhHHHHHHHHhc---cC---------------CCCceeecCCCCCCCCCCCCCc--------cchhhhcCCCCCCCCeEE
Q psy12587 144 EFTKSVVQATFR---SL---------------DHKCLDILYPSVYTEGLEKTTP--------EPIENVLNPLPGKEDIVF 197 (390)
Q Consensus 144 ~~~~~~~~~~~~---~~---------------~~~~~~vi~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~i 197 (390)
...+..+.+... +. ..-++.+.|-|||...+..... ..+++.+ ...++.+|
T Consensus 266 ~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~i 342 (854)
T PLN02205 266 FDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQF---CDQDRIML 342 (854)
T ss_pred HHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHh---ccCCCEEE
Confidence 888887776211 11 0124667888999887654211 1223333 22257889
Q ss_pred EEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCC-CCcchhHHHHHHHHHHHHc----C---CCCcEEEe
Q psy12587 198 LSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDP-HNIENVEYYKELGVLVKKL----K---LSDNVLFL 269 (390)
Q Consensus 198 ~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~-~~~~~~~y~~~~~~~~~~~----~---l~~~v~~~ 269 (390)
+.+.|+...||+..=+.|+.++.+++|+ ...++.|+.+..... ...+.+++..++.+.+.+. | ..+-+.+.
T Consensus 343 lgVDrlD~~KGi~~kl~A~e~~L~~~P~-~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~ 421 (854)
T PLN02205 343 LGVDDMDIFKGISLKLLAMEQLLMQHPE-WQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLID 421 (854)
T ss_pred EEccCcccccCHHHHHHHHHHHHHhCcc-ccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEe
Confidence 9999999999999999999999999996 334566766653322 2223345555666666543 2 22323444
Q ss_pred cCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCC-------------------CEEEecCCCcccceecCcceee
Q psy12587 270 TSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKR-------------------PVIAVNSGGPKESVVDGRTGFL 330 (390)
Q Consensus 270 g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~-------------------pvi~~~~~~~~e~i~~~~~g~~ 330 (390)
..++.+|+..+|+.||+++.++..+|+.++..|+.+|.. .+|.|...|....+. ..++
T Consensus 422 ~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L~---~Ai~ 498 (854)
T PLN02205 422 APLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSLS---GAIR 498 (854)
T ss_pred cCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeeccchhHHhC---cCeE
Confidence 679999999999999999999999999999999999864 367788777766662 3689
Q ss_pred ecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhh
Q psy12587 331 CES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLD 386 (390)
Q Consensus 331 ~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (390)
++| |.++++++|.+.++.+.++++..-+..++.+ ..++...+++.++.-++++.+
T Consensus 499 VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v-~~~d~~~W~~~fl~~l~~~~~ 554 (854)
T PLN02205 499 VNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYV-STHDVGYWARSFLQDLERTCR 554 (854)
T ss_pred ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHHHHHH
Confidence 999 9999999999999998756666666777777 789999999999988877654
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.6e-14 Score=125.93 Aligned_cols=293 Identities=11% Similarity=0.026 Sum_probs=165.0
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecC--Cccc-c-ccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHH-HHhh-
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHD--HCFK-E-TKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYV-AWYS- 74 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~--~~~~-~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~- 74 (390)
+||.-.-...+ ++|.++||+|.+++ ...+ + ....++.+..+... +......+..+...++.....+.. .+++
T Consensus 11 TGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~l~~~~g~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 89 (352)
T PRK12446 11 SAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKTIIEKENIPYYSISSG-KLRRYFDLKNIKDPFLVMKGVMDAYVRIRK 89 (352)
T ss_pred cHHHHHHHHHHHHHHHhCCCEEEEEECCCccccccCcccCCcEEEEecc-CcCCCchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46777777888 99999999998882 2211 1 22334555555321 111111222222322222222211 3456
Q ss_pred cCCCEEEEcccccc---hhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHH
Q psy12587 75 EKPDLVFCDLVSIC---IPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQ 151 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~---~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 151 (390)
.+||+|+.+....+ ..++++.++|++++..+... ....+.+.+.++.+++.-+...
T Consensus 90 ~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~-----------------g~~nr~~~~~a~~v~~~f~~~~---- 148 (352)
T PRK12446 90 LKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTP-----------------GLANKIALRFASKIFVTFEEAA---- 148 (352)
T ss_pred cCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCc-----------------cHHHHHHHHhhCEEEEEccchh----
Confidence 99999999986554 34556666888765443211 1233455677888877654332
Q ss_pred HHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCH-HHHHHHHHHHHhhcccccccc
Q psy12587 152 ATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNL-ELAIYSLNSLRSRLSDEMKTH 230 (390)
Q Consensus 152 ~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~-~~ll~a~~~l~~~~~~~~~~~ 230 (390)
+.++ .+++.++.+++..+..... ....++.++ +..+.+.++++-|+... +.+ +.+.+++..+.+.
T Consensus 149 ~~~~---~~k~~~tG~Pvr~~~~~~~-~~~~~~~~~-l~~~~~~iLv~GGS~Ga-~~in~~~~~~l~~l~~~-------- 214 (352)
T PRK12446 149 KHLP---KEKVIYTGSPVREEVLKGN-REKGLAFLG-FSRKKPVITIMGGSLGA-KKINETVREALPELLLK-------- 214 (352)
T ss_pred hhCC---CCCeEEECCcCCccccccc-chHHHHhcC-CCCCCcEEEEECCccch-HHHHHHHHHHHHhhccC--------
Confidence 2222 4688899999887654322 223333333 33434455555565543 334 3333444444322
Q ss_pred eEE-EEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCC
Q psy12587 231 VKL-VVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRP 309 (390)
Q Consensus 231 ~~l-~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~p 309 (390)
+++ +++|.... ++.. ... +++...+++. +++.++|+.||++|.-+ .++++.|++++|+|
T Consensus 215 ~~vv~~~G~~~~---------~~~~---~~~---~~~~~~~f~~-~~m~~~~~~adlvIsr~----G~~t~~E~~~~g~P 274 (352)
T PRK12446 215 YQIVHLCGKGNL---------DDSL---QNK---EGYRQFEYVH-GELPDILAITDFVISRA----GSNAIFEFLTLQKP 274 (352)
T ss_pred cEEEEEeCCchH---------HHHH---hhc---CCcEEecchh-hhHHHHHHhCCEEEECC----ChhHHHHHHHcCCC
Confidence 444 45564321 2211 111 2334456652 45689999999999643 57789999999999
Q ss_pred EEEecCCC---------cccceecCcceeeecC---CHHHHHHHHHHHhcCCh
Q psy12587 310 VIAVNSGG---------PKESVVDGRTGFLCES---NEEAFAKAMKKIVDNDG 350 (390)
Q Consensus 310 vi~~~~~~---------~~e~i~~~~~g~~~~~---~~~~l~~~i~~l~~~~~ 350 (390)
.|..+... ..+.+.+...+..+.. +++.+.+++.++++|++
T Consensus 275 ~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~ 327 (352)
T PRK12446 275 MLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNE 327 (352)
T ss_pred EEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHH
Confidence 99986431 1123334445555532 78999999999998876
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.8e-13 Score=120.87 Aligned_cols=297 Identities=11% Similarity=0.127 Sum_probs=208.1
Q ss_pred HHhh--cCCCEEEEcccccchhHHHhhc----ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccH
Q psy12587 71 AWYS--EKPDLVFCDLVSICIPILQAKQ----FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSE 144 (390)
Q Consensus 71 ~~~~--~~~Dvi~~~~~~~~~~~~~~~~----~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~ 144 (390)
.+.+ .+=|+|++|+....+....+.. .++.++.|-|.+.... ++-+- .+.-.-..+-.||.|-+.++
T Consensus 140 ~i~~~~~~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPssEv----fr~lP---~r~eIl~gll~~dligFqt~ 212 (486)
T COG0380 140 KIVEIYEPGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSEV----FRCLP---WREEILEGLLGADLIGFQTE 212 (486)
T ss_pred HHHHhcCCCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCHHH----HhhCc---hHHHHHHHhhcCCeeEecCH
Confidence 3444 5669999999765554333322 7888888876542211 11100 01111122557899999999
Q ss_pred hHHHHHHHHhccCC----------------CCceeecCCCCCCCCCCCCCc--------cchhhhcCCCCCCCCeEEEEe
Q psy12587 145 FTKSVVQATFRSLD----------------HKCLDILYPSVYTEGLEKTTP--------EPIENVLNPLPGKEDIVFLSI 200 (390)
Q Consensus 145 ~~~~~~~~~~~~~~----------------~~~~~vi~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~i~~~ 200 (390)
..+..+........ ..++..+|-|+|+..+..... ..+++.+ . ++..+|+.+
T Consensus 213 ~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~---~-~~~kiivgv 288 (486)
T COG0380 213 SYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAEL---G-RNKKLIVGV 288 (486)
T ss_pred HHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHh---c-CCceEEEEe
Confidence 88888776533221 135677888999887764321 1222322 2 247888999
Q ss_pred ecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCc-chhHHHHHHHHHHHHc-------CCCCcEEEecCC
Q psy12587 201 NRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNI-ENVEYYKELGVLVKKL-------KLSDNVLFLTSP 272 (390)
Q Consensus 201 g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~-~~~~y~~~~~~~~~~~-------~l~~~v~~~g~~ 272 (390)
.|++..||+..=+.|+.++..++|+ ...++.++-++....... +.+.+..+++..+.+. +..+-..+.-.+
T Consensus 289 DRlDy~kGi~~rl~Afe~lL~~~Pe-~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~ 367 (486)
T COG0380 289 DRLDYSKGIPQRLLAFERLLEEYPE-WRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDL 367 (486)
T ss_pred hhcccccCcHHHHHHHHHHHHhChh-hhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccC
Confidence 9999999999999999999999986 445677777775443321 1123444455544433 233444556669
Q ss_pred ChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcC----CCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhc
Q psy12587 273 SDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCK----RPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVD 347 (390)
Q Consensus 273 ~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G----~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~ 347 (390)
+..++..+|+.||+++.++..||+.++..|+.+|. =|.|-|...|....+.+ .++++| |.++++++|.+.++
T Consensus 368 ~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~---AliVNP~d~~~va~ai~~AL~ 444 (486)
T COG0380 368 DRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD---ALIVNPWDTKEVADAIKRALT 444 (486)
T ss_pred CHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhhcc---CEeECCCChHHHHHHHHHHhc
Confidence 99999999999999999999999999999999984 47788888777776644 689999 99999999999999
Q ss_pred CChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHh
Q psy12587 348 NDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNN 383 (390)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
.+.+++++.-+..++.+ ..++...++..+++-+..
T Consensus 445 m~~eEr~~r~~~~~~~v-~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 445 MSLEERKERHEKLLKQV-LTHDVARWANSFLDDLAQ 479 (486)
T ss_pred CCHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHh
Confidence 99867777667777777 789999999998887764
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.1e-14 Score=127.44 Aligned_cols=192 Identities=11% Similarity=0.132 Sum_probs=144.1
Q ss_pred cCcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHH
Q psy12587 134 CKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAI 213 (390)
Q Consensus 134 ~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll 213 (390)
.+.|.||+.++...+.+.++++. ..++.++|-|+-.. ++. ....+..+++++. +..|
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~--~~~~~~ip~g~i~~-~~~-------------~~r~~~~~l~~t~-------s~~I 294 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDN--EYQEQISQLGYLYP-FKK-------------DNKYRKQALILTN-------SDQI 294 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCc--ccCceEEEEEEEEe-ecc-------------ccCCcccEEEECC-------HHHH
Confidence 57799999999988888887763 35778888776422 111 1112334455551 8999
Q ss_pred HHHHHHHhhcccccccceEEEEEcCCCC-CCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCC
Q psy12587 214 YSLNSLRSRLSDEMKTHVKLVVAGGYDP-HNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPS 292 (390)
Q Consensus 214 ~a~~~l~~~~~~~~~~~~~l~i~G~~~~-~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~ 292 (390)
+++..+.+..|+ ++|.| |.+.. . +++.++ .++ +++..++......+.++|..||+++..+.
T Consensus 295 ~~i~~Lv~~lPd-----~~f~I-ga~te~s--------~kL~~L-~~y---~nvvly~~~~~~~l~~ly~~~dlyLdin~ 356 (438)
T TIGR02919 295 EHLEEIVQALPD-----YHFHI-AALTEMS--------SKLMSL-DKY---DNVKLYPNITTQKIQELYQTCDIYLDINH 356 (438)
T ss_pred HHHHHHHHhCCC-----cEEEE-EecCccc--------HHHHHH-Hhc---CCcEEECCcChHHHHHHHHhccEEEEccc
Confidence 999999999996 99999 76665 3 778777 666 44544444444556899999999999999
Q ss_pred CCCCCccHHhhhhcCCCEEEecCC-CcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCH
Q psy12587 293 NEHFGIVPIEAMFCKRPVIAVNSG-GPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSF 370 (390)
Q Consensus 293 ~e~~~~~~~Ea~a~G~pvi~~~~~-~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (390)
.|++++++.||++.|+||++.+.. +..+++.+ |.+++. ++++++++|.+++++++ .+++.-...++.+ ..-+.
T Consensus 357 ~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL~d~~-~~~~~~~~q~~~a-~~~~~ 431 (438)
T TIGR02919 357 GNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLLNDPN-QFRELLEQQREHA-NDISK 431 (438)
T ss_pred cccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHhcCHH-HHHHHHHHHHHHh-ccCCH
Confidence 999999999999999999998864 55577655 788888 99999999999999998 6666555555554 34444
Q ss_pred H
Q psy12587 371 Q 371 (390)
Q Consensus 371 ~ 371 (390)
+
T Consensus 432 ~ 432 (438)
T TIGR02919 432 E 432 (438)
T ss_pred H
Confidence 4
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-13 Score=124.29 Aligned_cols=268 Identities=13% Similarity=0.069 Sum_probs=165.5
Q ss_pred CCCEEEEcccccchhHHHhhcccEEE-EeecCCccccc-hhhhhhhhcccchhhH------HHHHhcCcceEEEccHhHH
Q psy12587 76 KPDLVFCDLVSICIPILQAKQFKVLF-YCHYPDQLLSK-QGSFLKSIYRFPLNKL------EEWTTCKADKIVVNSEFTK 147 (390)
Q Consensus 76 ~~Dvi~~~~~~~~~~~~~~~~~~~v~-~~h~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~ad~ii~~s~~~~ 147 (390)
+||+|++.+....+.++++.++|+++ -.|..+..... ........+.++.... .+...+.|+.+++..+...
T Consensus 93 ~p~~v~~~Gg~v~~~aA~~~~~p~~~~~~~esn~~~~~~~~~~~~~~~~~~~G~~~~p~e~n~l~~~~a~~v~~~~~~t~ 172 (396)
T TIGR03492 93 KGDLIVAVGDIVPLLFAWLSGKPYAFVGTAKSDYYWESGPRRSPSDEYHRLEGSLYLPWERWLMRSRRCLAVFVRDRLTA 172 (396)
T ss_pred cCCEEEEECcHHHHHHHHHcCCCceEEEeeccceeecCCCCCccchhhhccCCCccCHHHHHHhhchhhCEEeCCCHHHH
Confidence 99999999976666777777877665 34543332111 1111111112111111 3555678999999999988
Q ss_pred HHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeeccc--ccCCHHHHHHHHHHHHhhccc
Q psy12587 148 SVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYE--RKKNLELAIYSLNSLRSRLSD 225 (390)
Q Consensus 148 ~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~--~~K~~~~ll~a~~~l~~~~~~ 225 (390)
+.+.+. ..++.++.|++-....... .. . ++.+.+.+++..|+-. ..+++..+++++..+.++ ++
T Consensus 173 ~~l~~~-----g~k~~~vGnPv~d~l~~~~-~~----~---l~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~ 238 (396)
T TIGR03492 173 RDLRRQ-----GVRASYLGNPMMDGLEPPE-RK----P---LLTGRFRIALLPGSRPPEAYRNLKLLLRALEALPDS-QP 238 (396)
T ss_pred HHHHHC-----CCeEEEeCcCHHhcCcccc-cc----c---cCCCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhC-CC
Confidence 888764 2489999998744432211 11 1 2333455666666653 346778999999999765 43
Q ss_pred ccccceEEEEEc-CCCCCCcchhHHHHHHHHHHHHcCCC--------------CcEEEecCCChHHHHHHHHhcceEEeC
Q psy12587 226 EMKTHVKLVVAG-GYDPHNIENVEYYKELGVLVKKLKLS--------------DNVLFLTSPSDAAKISLFKFCHCIIYT 290 (390)
Q Consensus 226 ~~~~~~~l~i~G-~~~~~~~~~~~y~~~~~~~~~~~~l~--------------~~v~~~g~~~~~e~~~~~~~adv~v~p 290 (390)
+.+++.- +.... +.+++..++.++. +++.+..+. .++..+|+.||++|..
T Consensus 239 -----~~~v~~~~~~~~~--------~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~l~~ADlvI~r 303 (396)
T TIGR03492 239 -----FVFLAAIVPSLSL--------EKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGR--GAFAEILHWADLGIAM 303 (396)
T ss_pred -----eEEEEEeCCCCCH--------HHHHHHHHhcCceecCCccccchhhccCceEEEech--HhHHHHHHhCCEEEEC
Confidence 6665543 23222 5666666655543 125555443 4568999999999987
Q ss_pred CCCCCCCccHHhhhhcCCCEEEecCCCc---ccceecC----cceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHH
Q psy12587 291 PSNEHFGIVPIEAMFCKRPVIAVNSGGP---KESVVDG----RTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFN 362 (390)
Q Consensus 291 s~~e~~~~~~~Ea~a~G~pvi~~~~~~~---~e~i~~~----~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~ 362 (390)
| |.+..|++++|+|+|..+..+. ..+.+.. ..+..+.. +++.+++++.++++|++ .+++|.+++++
T Consensus 304 S-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d~~-~~~~~~~~~~~ 377 (396)
T TIGR03492 304 A-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLADPE-LLERCRRNGQE 377 (396)
T ss_pred c-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcCHH-HHHHHHHHHHH
Confidence 5 6667999999999999874322 1222220 13344444 88999999999999988 78788755544
Q ss_pred HHhhhcCHHHHHHHHH
Q psy12587 363 RFNEKFSFQAFSIQLN 378 (390)
Q Consensus 363 ~~~~~~~~~~~~~~~~ 378 (390)
...+....+.+++.+.
T Consensus 378 ~lg~~~a~~~ia~~i~ 393 (396)
T TIGR03492 378 RMGPPGASARIAESIL 393 (396)
T ss_pred hcCCCCHHHHHHHHHH
Confidence 4434444555554443
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.3e-15 Score=122.50 Aligned_cols=164 Identities=19% Similarity=0.207 Sum_probs=86.3
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCccccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cCCCE
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EKPDL 79 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dv 79 (390)
.||+|+++.+| ++|+++||+|+++.....+..... ...................+ ..... ...+++ .+||+
T Consensus 11 ~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~i~~~~~Di 83 (177)
T PF13439_consen 11 IGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEE-LVKIFVKIPYPIRKRFLRSF-FFMRR-----LRRLIKKEKPDI 83 (177)
T ss_dssp SSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SST-EEEE---TT-SSTSS--HHH-HHHHH-----HHHHHHHHT-SE
T ss_pred CChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhh-ccceeeeeecccccccchhH-HHHHH-----HHHHHHHcCCCe
Confidence 69999999999 999999999999822222221111 11111111101111111111 11111 112445 89999
Q ss_pred EEEcccccchhH-HHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHHhccCC
Q psy12587 80 VFCDLVSICIPI-LQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLD 158 (390)
Q Consensus 80 i~~~~~~~~~~~-~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~ 158 (390)
||+|........ ....++|++++.|+.... .............+...+++..++.+|.++++|+.+++.+.+ ++ .+
T Consensus 84 Vh~~~~~~~~~~~~~~~~~~~v~~~H~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~~-~~-~~ 160 (177)
T PF13439_consen 84 VHIHGPPAFWIALLACRKVPIVYTIHGPYFE-RRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELIK-FG-IP 160 (177)
T ss_dssp EECCTTHCCCHHHHHHHCSCEEEEE-HHH---HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHHH-HT---
T ss_pred EEecccchhHHHHHhccCCCEEEEeCCCccc-ccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHHH-hC-Cc
Confidence 999985543322 222279999999985421 000011111222223344556689999999999999999999 65 54
Q ss_pred CCceeecCCCCCCCCCC
Q psy12587 159 HKCLDILYPSVYTEGLE 175 (390)
Q Consensus 159 ~~~~~vi~~~~~~~~~~ 175 (390)
++++.+||||+|.+.|.
T Consensus 161 ~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 161 PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp SS-EEE----B-CCCH-
T ss_pred ccCCEEEECCccHHHcC
Confidence 78999999999998763
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.5e-15 Score=106.36 Aligned_cols=92 Identities=18% Similarity=0.260 Sum_probs=86.2
Q ss_pred eEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHh
Q psy12587 286 CIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFN 365 (390)
Q Consensus 286 v~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 365 (390)
+++.|+..++++..++|+||||+|+|+++.+++.+++.++..++.++ |++++.+++..+++|++ .++++++++++.+.
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~-~~~el~~~i~~ll~~~~-~~~~ia~~a~~~v~ 78 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN-DPEELAEKIEYLLENPE-ERRRIAKNARERVL 78 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC-CHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHH
Confidence 45778888999999999999999999999999999999998999999 99999999999999999 99999999999999
Q ss_pred hhcCHHHHHHHHHH
Q psy12587 366 EKFSFQAFSIQLNT 379 (390)
Q Consensus 366 ~~~~~~~~~~~~~~ 379 (390)
++|+|+..++++++
T Consensus 79 ~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 79 KRHTWEHRAEQILE 92 (92)
T ss_pred HhCCHHHHHHHHHC
Confidence 99999999998863
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.60 E-value=3e-15 Score=118.32 Aligned_cols=149 Identities=15% Similarity=0.105 Sum_probs=82.7
Q ss_pred CcchhhhHhh-HhhhhcCCceeec----CCccccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHh--h-
Q psy12587 3 GATARLTITA-TAWGATGPRTTAH----DHCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWY--S- 74 (390)
Q Consensus 3 GG~~~~~~~l-~~L~~~G~~V~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 74 (390)
||+++++.+| ++|.++||+|+++ .....+....++.+..++..........+..+..+ ..++ +
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~~ 71 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDEEEEDGVRVHRLPLPRRPWPLRLLRFLRRL---------RRLLAARR 71 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-SEEETTEEEEEE--S-SSSGGGHCCHHHHH---------HHHCHHCT
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccccccCCceEEeccCCccchhhhhHHHHHHH---------HHHHhhhc
Confidence 8999999999 9999999999988 12222233455666666422211111111111111 1233 4
Q ss_pred cCCCEEEEcccccchhHH--H-hhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHH
Q psy12587 75 EKPDLVFCDLVSICIPIL--Q-AKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQ 151 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~--~-~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 151 (390)
.+||+||++++...+... + ..++|+|+++|+.... .. ..+...+..++++.+++.||.++++|+.+++.+.
T Consensus 72 ~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~ 145 (160)
T PF13579_consen 72 ERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFR--RG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLR 145 (160)
T ss_dssp ---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T------------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHH
T ss_pred cCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchh--hc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHH
Confidence 999999999964333222 2 3349999999974321 11 2222333467788999999999999999999999
Q ss_pred HHhccCCCCceeecCCC
Q psy12587 152 ATFRSLDHKCLDILYPS 168 (390)
Q Consensus 152 ~~~~~~~~~~~~vi~~~ 168 (390)
+ ++ .+.+++.|||||
T Consensus 146 ~-~g-~~~~ri~vipnG 160 (160)
T PF13579_consen 146 R-YG-VPPDRIHVIPNG 160 (160)
T ss_dssp H-H----GGGEEE----
T ss_pred H-hC-CCCCcEEEeCcC
Confidence 9 44 557899999997
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.1e-12 Score=109.94 Aligned_cols=271 Identities=14% Similarity=0.134 Sum_probs=177.5
Q ss_pred cCCCEEEEcc---cccchhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHH
Q psy12587 75 EKPDLVFCDL---VSICIPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQ 151 (390)
Q Consensus 75 ~~~Dvi~~~~---~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 151 (390)
.+||+++... |+..+.-.+..++|.++.---.. ....+++. ..+.+.+.++++.|.|++.|+..++.+.
T Consensus 122 ~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRLS------~rS~~~y~--k~~~~~~~~~~~i~li~aQse~D~~Rf~ 193 (419)
T COG1519 122 WRPKLLIIMETELWPNLINELKRRGIPLVLVNARLS------DRSFARYA--KLKFLARLLFKNIDLILAQSEEDAQRFR 193 (419)
T ss_pred cCCCEEEEEeccccHHHHHHHHHcCCCEEEEeeeec------hhhhHHHH--HHHHHHHHHHHhcceeeecCHHHHHHHH
Confidence 7999988766 44444444555677765322100 01111111 1235667778899999999999999998
Q ss_pred HHhccCCCCceeecCCC-CCCCCCC--CCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccc
Q psy12587 152 ATFRSLDHKCLDILYPS-VYTEGLE--KTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMK 228 (390)
Q Consensus 152 ~~~~~~~~~~~~vi~~~-~~~~~~~--~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~ 228 (390)
+. |. .++.+..|- .|.+.-+ .......+..++ . .+.+++..+.. ...-+.++++++.++++.|+
T Consensus 194 ~L--Ga--~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~---~-~r~v~iaaSTH--~GEeei~l~~~~~l~~~~~~--- 260 (419)
T COG1519 194 SL--GA--KPVVVTGNLKFDIEPPPQLAAELAALRRQLG---G-HRPVWVAASTH--EGEEEIILDAHQALKKQFPN--- 260 (419)
T ss_pred hc--CC--cceEEecceeecCCCChhhHHHHHHHHHhcC---C-CCceEEEecCC--CchHHHHHHHHHHHHhhCCC---
Confidence 86 33 457777763 2221111 111133444442 2 26666776662 22345589999999999985
Q ss_pred cceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCC-------------cEEEecCCChHHHHHHHHhcceEEeC-CCCC
Q psy12587 229 THVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSD-------------NVLFLTSPSDAAKISLFKFCHCIIYT-PSNE 294 (390)
Q Consensus 229 ~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~-------------~v~~~g~~~~~e~~~~~~~adv~v~p-s~~e 294 (390)
..++++-..+++ .+.+.+++++.|+.- +|.+.. +-.|+..+|..||+.++. |..+
T Consensus 261 --~llIlVPRHpER-------f~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~D--tmGEL~l~y~~adiAFVGGSlv~ 329 (419)
T COG1519 261 --LLLILVPRHPER-------FKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGD--TMGELGLLYGIADIAFVGGSLVP 329 (419)
T ss_pred --ceEEEecCChhh-------HHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEe--cHhHHHHHHhhccEEEECCcccC
Confidence 999999988765 378889999887631 222211 125789999999987665 5566
Q ss_pred CCCccHHhhhhcCCCEEEecC-C---CcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCH
Q psy12587 295 HFGIVPIEAMFCKRPVIAVNS-G---GPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSF 370 (390)
Q Consensus 295 ~~~~~~~Ea~a~G~pvi~~~~-~---~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (390)
..|-.++|+.++|+|||..+. - ...+.+...+.|+.++ |.+.+++++..+++|++ .++++++++.+.+.++
T Consensus 330 ~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~-~~~~l~~~v~~l~~~~~-~r~~~~~~~~~~v~~~--- 404 (419)
T COG1519 330 IGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVE-DADLLAKAVELLLADED-KREAYGRAGLEFLAQN--- 404 (419)
T ss_pred CCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEEC-CHHHHHHHHHHhcCCHH-HHHHHHHHHHHHHHHh---
Confidence 678899999999999999653 2 3333344556788888 78888888888888877 9999999999988543
Q ss_pred HHHHHHHHHHHH
Q psy12587 371 QAFSIQLNTIVN 382 (390)
Q Consensus 371 ~~~~~~~~~~~~ 382 (390)
....++..+.++
T Consensus 405 ~gal~r~l~~l~ 416 (419)
T COG1519 405 RGALARTLEALK 416 (419)
T ss_pred hHHHHHHHHHhh
Confidence 223444444443
|
|
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.4e-11 Score=107.51 Aligned_cols=282 Identities=16% Similarity=0.164 Sum_probs=150.2
Q ss_pred cchhhhHhh-HhhhhcCCceeec--CCccccccCCCcceEEecccccccc---chhhHHHHHHH---HHHHHHH--HHHH
Q psy12587 4 ATARLTITA-TAWGATGPRTTAH--DHCFKETKDGTLPVKVIGDWLPRNI---FGKFYALCMYL---RMIVIAL--YVAW 72 (390)
Q Consensus 4 G~~~~~~~l-~~L~~~G~~V~~~--~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~--~~~~ 72 (390)
|.-.++..+ ++| +||+|+++ +... +.....+.+..++....... ........... ....... ...+
T Consensus 13 GH~~R~~~la~~L--rg~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (318)
T PF13528_consen 13 GHASRCLALARAL--RGHEVTFITSGPAP-EFLKPRFPVREIPGLGPIQENGRLDRWKTVRNNIRWLARLARRIRREIRW 89 (318)
T ss_pred CHHHHHHHHHHHH--ccCceEEEEcCCcH-HHhccccCEEEccCceEeccCCccchHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 667788889 999 48999988 3222 22221133333322211111 11111111111 1111111 1245
Q ss_pred hh-cCCCEEEEcccccchhHHHhhcccEEEEeecCCccccc-hhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHH
Q psy12587 73 YS-EKPDLVFCDLVSICIPILQAKQFKVLFYCHYPDQLLSK-QGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVV 150 (390)
Q Consensus 73 ~~-~~~Dvi~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 150 (390)
++ .+||+|++...+....+++..++|+|...|..+..... .......+...+.+...+..+..++..+..+-...
T Consensus 90 l~~~~pDlVIsD~~~~~~~aa~~~giP~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--- 166 (318)
T PF13528_consen 90 LREFRPDLVISDFYPLAALAARRAGIPVIVISNQYWFLHPNFWLPWDQDFGRLIERYIDRYHFPPADRRLALSFYPP--- 166 (318)
T ss_pred HHhcCCCEEEEcChHHHHHHHHhcCCCEEEEEehHHcccccCCcchhhhHHHHHHHhhhhccCCcccceecCCcccc---
Confidence 56 99999999987666667777789999888854332101 00000111111111111111334444444432200
Q ss_pred HHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccc
Q psy12587 151 QATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTH 230 (390)
Q Consensus 151 ~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~ 230 (390)
.....+..+++..+........ +.+.+.+++++|..... .++++++.+. +
T Consensus 167 -----~~~~~~~~~~~p~~~~~~~~~~------------~~~~~~iLv~~gg~~~~----~~~~~l~~~~----~----- 216 (318)
T PF13528_consen 167 -----LPPFFRVPFVGPIIRPEIRELP------------PEDEPKILVYFGGGGPG----DLIEALKALP----D----- 216 (318)
T ss_pred -----ccccccccccCchhcccccccC------------CCCCCEEEEEeCCCcHH----HHHHHHHhCC----C-----
Confidence 0001223333333222211111 22466788999987544 5666666643 2
Q ss_pred eEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCc-cHHhhhhcCCC
Q psy12587 231 VKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGI-VPIEAMFCKRP 309 (390)
Q Consensus 231 ~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~-~~~Ea~a~G~p 309 (390)
..++++|..... .. .++|.+.++. ..++.++|+.||++|.-+ |. ++.||+++|+|
T Consensus 217 ~~~~v~g~~~~~--------~~----------~~ni~~~~~~-~~~~~~~m~~ad~vIs~~-----G~~t~~Ea~~~g~P 272 (318)
T PF13528_consen 217 YQFIVFGPNAAD--------PR----------PGNIHVRPFS-TPDFAELMAAADLVISKG-----GYTTISEALALGKP 272 (318)
T ss_pred CeEEEEcCCccc--------cc----------CCCEEEeecC-hHHHHHHHHhCCEEEECC-----CHHHHHHHHHcCCC
Confidence 678888765321 00 4789988764 255689999999999644 44 59999999999
Q ss_pred EEEecCCCccc------ceecCcceeeec--C-CHHHHHHHHHHH
Q psy12587 310 VIAVNSGGPKE------SVVDGRTGFLCE--S-NEEAFAKAMKKI 345 (390)
Q Consensus 310 vi~~~~~~~~e------~i~~~~~g~~~~--~-~~~~l~~~i~~l 345 (390)
+|+-+..+..| .+++.+.|..++ . +++.+.+.|+++
T Consensus 273 ~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 273 ALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred EEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcC
Confidence 99988755444 234445566654 3 788888888764
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.2e-10 Score=104.02 Aligned_cols=267 Identities=13% Similarity=0.077 Sum_probs=153.4
Q ss_pred Hhh-cCCCEEEEcccc-cc---hhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhH
Q psy12587 72 WYS-EKPDLVFCDLVS-IC---IPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFT 146 (390)
Q Consensus 72 ~~~-~~~Dvi~~~~~~-~~---~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~ 146 (390)
+++ .+||+|++++-. .. ..++...++|++ ++|+...-... .. ....+.+-+.|+..+++++..
T Consensus 88 ~~~~~~Pd~vlv~GD~~~~la~alaA~~~~IPv~-HveaG~rs~~~----~e-------E~~r~~i~~la~l~f~~t~~~ 155 (365)
T TIGR03568 88 AFERLKPDLVVVLGDRFEMLAAAIAAALLNIPIA-HIHGGEVTEGA----ID-------ESIRHAITKLSHLHFVATEEY 155 (365)
T ss_pred HHHHhCCCEEEEeCCchHHHHHHHHHHHhCCcEE-EEECCccCCCC----ch-------HHHHHHHHHHHhhccCCCHHH
Confidence 344 999999999843 22 233445558876 56643221110 00 111122344578888999999
Q ss_pred HHHHHHHhccCCCCceeecCCC-CCCCCC-CCCCccchhhhcCCCCCCCCeEEEEeeccc--ccCCHHHHHHHHHHHHhh
Q psy12587 147 KSVVQATFRSLDHKCLDILYPS-VYTEGL-EKTTPEPIENVLNPLPGKEDIVFLSINRYE--RKKNLELAIYSLNSLRSR 222 (390)
Q Consensus 147 ~~~~~~~~~~~~~~~~~vi~~~-~~~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~--~~K~~~~ll~a~~~l~~~ 222 (390)
++.+.+. +.++.++.++.|. +|.-.. .........+.++ ++.+.+++++.+-+-. .....+.+.+.++.+.+.
T Consensus 156 ~~~L~~e--g~~~~~i~~tG~~~iD~l~~~~~~~~~~~~~~lg-l~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~ 232 (365)
T TIGR03568 156 RQRVIQM--GEDPDRVFNVGSPGLDNILSLDLLSKEELEEKLG-IDLDKPYALVTFHPVTLEKESAEEQIKELLKALDEL 232 (365)
T ss_pred HHHHHHc--CCCCCcEEEECCcHHHHHHhhhccCHHHHHHHhC-CCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHh
Confidence 9988775 4546788888885 443211 1112233444443 3322356555554432 223334444444444333
Q ss_pred cccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCC-CCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHH
Q psy12587 223 LSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKL-SDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPI 301 (390)
Q Consensus 223 ~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l-~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~ 301 (390)
.. ++.++.-..++.. ..+.+.+.++.- .+++.+.+.++..++..+++.|++++..| +..+-
T Consensus 233 ~~-----~~~vi~P~~~p~~--------~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~~vitdS-----Sggi~ 294 (365)
T TIGR03568 233 NK-----NYIFTYPNADAGS--------RIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADAVIGNS-----SSGII 294 (365)
T ss_pred cc-----CCEEEEeCCCCCc--------hHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCCEEEEcC-----hhHHH
Confidence 22 2433222222221 233333333211 36899999999999999999999999544 22348
Q ss_pred hhhhcCCCEEEecCCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHH
Q psy12587 302 EAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTI 380 (390)
Q Consensus 302 Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
||.++|+|+|+- +.-+|.+..+.+.+.+..|++++.+++.+++ ++. .+..+. .....|.....++++.++
T Consensus 295 EA~~lg~Pvv~l--~~R~e~~~~g~nvl~vg~~~~~I~~a~~~~~-~~~-~~~~~~-----~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 295 EAPSFGVPTINI--GTRQKGRLRADSVIDVDPDKEEIVKAIEKLL-DPA-FKKSLK-----NVKNPYGDGNSSERIIEI 364 (365)
T ss_pred hhhhcCCCEEee--cCCchhhhhcCeEEEeCCCHHHHHHHHHHHh-ChH-HHHHHh-----hCCCCCCCChHHHHHHHh
Confidence 999999999964 4566777777777777559999999999954 434 333331 122446555566666554
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.9e-10 Score=104.69 Aligned_cols=111 Identities=14% Similarity=0.152 Sum_probs=77.4
Q ss_pred CCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCc----ccceecCcceeeecC---C
Q psy12587 262 LSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGP----KESVVDGRTGFLCES---N 334 (390)
Q Consensus 262 l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~----~e~i~~~~~g~~~~~---~ 334 (390)
+++++.+.++++.. ++|..||++|..+ ...++.||+++|+|+|+....+- .+.+.+.+.|..+.. +
T Consensus 273 ~~~~v~~~~~~p~~---~ll~~~~~~I~hg----G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~ 345 (392)
T TIGR01426 273 LPPNVEVRQWVPQL---EILKKADAFITHG----GMNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPEEVT 345 (392)
T ss_pred CCCCeEEeCCCCHH---HHHhhCCEEEECC----CchHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccccCC
Confidence 35789999999875 5789999999644 23579999999999999664322 233444456666643 7
Q ss_pred HHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHH
Q psy12587 335 EEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIV 381 (390)
Q Consensus 335 ~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
.++++++|.+++++++ .++++.+- ++.+...-..+..++.+.+++
T Consensus 346 ~~~l~~ai~~~l~~~~-~~~~~~~l-~~~~~~~~~~~~aa~~i~~~~ 390 (392)
T TIGR01426 346 AEKLREAVLAVLSDPR-YAERLRKM-RAEIREAGGARRAADEIEGFL 390 (392)
T ss_pred HHHHHHHHHHHhcCHH-HHHHHHHH-HHHHHHcCCHHHHHHHHHHhh
Confidence 8999999999999887 66555433 333334556666666665543
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=99.39 E-value=8.4e-11 Score=100.16 Aligned_cols=216 Identities=10% Similarity=0.038 Sum_probs=150.9
Q ss_pred ceEEEccHhH-HHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHH
Q psy12587 137 DKIVVNSEFT-KSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYS 215 (390)
Q Consensus 137 d~ii~~s~~~-~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a 215 (390)
|.|++.++.. ++.+.+... ..++..+|.++|.+.+.+.++.. .-.--+.++|+..+. ..+.+-+.
T Consensus 140 d~v~~~g~~l~~~~yyq~~~---~~~~~~~~~a~d~~~~~~i~~da----------~~~~dL~~ign~~pD-r~e~~ke~ 205 (373)
T COG4641 140 DNVLSFGGGLVANKYYQEGG---ARNCYYLPWAVDDSLFHPIPPDA----------SYDVDLNLIGNPYPD-RVEEIKEF 205 (373)
T ss_pred hhhhhccchHHHHHHHHhhc---ccceeccCccCCchhcccCCccc----------cceeeeEEecCCCcc-HHHHHHHH
Confidence 4466666665 555554433 57899999999999888764321 123357788887655 22332232
Q ss_pred HHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCCh-HHHHHHHHhcceEEeCCC--
Q psy12587 216 LNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSD-AAKISLFKFCHCIIYTPS-- 292 (390)
Q Consensus 216 ~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~-~e~~~~~~~adv~v~ps~-- 292 (390)
+..-..+... +-++...|...+. .+.. ....+++...|+++. ..+...++..|+.+.-++
T Consensus 206 ~~~ps~kl~v----~rr~~~~g~~y~~---------~~~~----~~~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~ 268 (373)
T COG4641 206 FVEPSFKLMV----DRRFYVLGPRYPD---------DIWG----RTWEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRAS 268 (373)
T ss_pred hhccchhhhc----cceeeecCCccch---------hhhc----ccccchhhhhhccCccchhhhcccccceeeeecHHH
Confidence 2221111110 1345566654221 1111 111357778888766 788899999999887654
Q ss_pred -CCC---CCccHHhhhhcCCCEEEecCCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhc
Q psy12587 293 -NEH---FGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKF 368 (390)
Q Consensus 293 -~e~---~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~ 368 (390)
.++ +.+.++|+++||.|.+++...++..++.+|..-++.. |.+++.+.+..++..++ .++++.+.+++.+...|
T Consensus 269 ~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~-d~kdl~~~~~yll~h~~-erkeiae~~ye~V~~~h 346 (373)
T COG4641 269 IANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQ-DSKDLKEKLKYLLNHPD-ERKEIAECAYERVLARH 346 (373)
T ss_pred HHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEec-CHHHHHHHHHHHhcCcc-hHHHHHHhhHHHHHHhc
Confidence 222 2678999999999999999999999998888766666 99999999999999999 99999999999999999
Q ss_pred CHHHHHHHHHHHHHhhh
Q psy12587 369 SFQAFSIQLNTIVNNML 385 (390)
Q Consensus 369 ~~~~~~~~~~~~~~~~~ 385 (390)
+.+.-+..+++.+.++.
T Consensus 347 t~~~r~~~~~~~i~sI~ 363 (373)
T COG4641 347 TYEERIFKLLNEIASIN 363 (373)
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 99999988888877643
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.9e-10 Score=101.14 Aligned_cols=302 Identities=12% Similarity=0.129 Sum_probs=174.9
Q ss_pred hhhhHhh-HhhhhcCCceeec---CCccccccCCCcceEEe-ccccccccchhhHHHHHHHHHHHHHHHHHHhh-cCCCE
Q psy12587 6 ARLTITA-TAWGATGPRTTAH---DHCFKETKDGTLPVKVI-GDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EKPDL 79 (390)
Q Consensus 6 ~~~~~~l-~~L~~~G~~V~~~---~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dv 79 (390)
..+...| ++|.++.-++.++ |..... .|+..... ...--.....-+..+..+++.. .... ..++ .+||+
T Consensus 11 D~~ga~Li~~Lk~~~p~~~~~GvGG~~M~~---~G~~~l~d~~~lsvmG~~Evl~~l~~~~~~~-~~~~-~~~~~~~pd~ 85 (373)
T PF02684_consen 11 DLHGARLIRALKARDPDIEFYGVGGPRMQA---AGVESLFDMEELSVMGFVEVLKKLPKLKRLF-RKLV-ERIKEEKPDV 85 (373)
T ss_pred HHHHHHHHHHHHhhCCCcEEEEEechHHHh---CCCceecchHHhhhccHHHHHHHHHHHHHHH-HHHH-HHHHHcCCCE
Confidence 3466788 9999988777776 222222 22222211 1100011111122222222221 1111 2334 99999
Q ss_pred EEEcc-cccchhHHHhhc---cc--EEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHH
Q psy12587 80 VFCDL-VSICIPILQAKQ---FK--VLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQAT 153 (390)
Q Consensus 80 i~~~~-~~~~~~~~~~~~---~~--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 153 (390)
++.-+ +.+.+.+++..+ ++ +|+++ .|..|.+.... .+.+-+.+|.+++.=++..+.+.+.
T Consensus 86 vIlID~pgFNlrlak~lk~~~~~~~viyYI-~PqvWAWr~~R-------------~~~i~~~~D~ll~ifPFE~~~y~~~ 151 (373)
T PF02684_consen 86 VILIDYPGFNLRLAKKLKKRGIPIKVIYYI-SPQVWAWRPGR-------------AKKIKKYVDHLLVIFPFEPEFYKKH 151 (373)
T ss_pred EEEeCCCCccHHHHHHHHHhCCCceEEEEE-CCceeeeCccH-------------HHHHHHHHhheeECCcccHHHHhcc
Confidence 88766 666777766554 44 65554 35554443211 1333456799999999999988885
Q ss_pred hccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeeccc--ccCCHHHHHHHHHHHHhhcccccccce
Q psy12587 154 FRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYE--RKKNLELAIYSLNSLRSRLSDEMKTHV 231 (390)
Q Consensus 154 ~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~--~~K~~~~ll~a~~~l~~~~~~~~~~~~ 231 (390)
+ -++..+.|++-...-........++.+ ++.+++.+.+..|+=. -.+.+..++++++.+.+++|+ +
T Consensus 152 --g---~~~~~VGHPl~d~~~~~~~~~~~~~~~--l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~-----l 219 (373)
T PF02684_consen 152 --G---VPVTYVGHPLLDEVKPEPDRAEAREKL--LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPD-----L 219 (373)
T ss_pred --C---CCeEEECCcchhhhccCCCHHHHHHhc--CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCC-----e
Confidence 2 478888888533222222222333332 3555677777888643 245668889999999999986 8
Q ss_pred EEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEE
Q psy12587 232 KLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVI 311 (390)
Q Consensus 232 ~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi 311 (390)
++++...... ..+.+++.....+..-.+... ..+..+.|+.||+.+..| |++.+|++.+|+|.|
T Consensus 220 ~fvvp~a~~~-------~~~~i~~~~~~~~~~~~~~~~----~~~~~~~m~~ad~al~~S-----GTaTLE~Al~g~P~V 283 (373)
T PF02684_consen 220 QFVVPVAPEV-------HEELIEEILAEYPPDVSIVII----EGESYDAMAAADAALAAS-----GTATLEAALLGVPMV 283 (373)
T ss_pred EEEEecCCHH-------HHHHHHHHHHhhCCCCeEEEc----CCchHHHHHhCcchhhcC-----CHHHHHHHHhCCCEE
Confidence 8888764432 113355555554432223221 123368999999999876 999999999999988
Q ss_pred EecC-C----------------CcccceecCc--ceeeecC-CHHHHHHHHHHHhcCChhHHHH
Q psy12587 312 AVNS-G----------------GPKESVVDGR--TGFLCES-NEEAFAKAMKKIVDNDGNIIQQ 355 (390)
Q Consensus 312 ~~~~-~----------------~~~e~i~~~~--~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~ 355 (390)
+.-. + +++.++-+.. .-++-+. +++.+++++..+++|++ .++.
T Consensus 284 v~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~~-~~~~ 346 (373)
T PF02684_consen 284 VAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENPE-KRKK 346 (373)
T ss_pred EEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCHH-HHHH
Confidence 7432 2 2222221111 1122234 89999999999999987 5333
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.3e-11 Score=107.46 Aligned_cols=267 Identities=14% Similarity=0.106 Sum_probs=147.0
Q ss_pred cCCCEEEEcccccch----hHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHH
Q psy12587 75 EKPDLVFCDLVSICI----PILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVV 150 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~----~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 150 (390)
.+||+|++++-.... .++...++| |.++|+.-.-.....+.... .....+-+.|+..++.++..++.+
T Consensus 66 ~~Pd~Vlv~GD~~~~la~alaA~~~~ip-v~HieaGlRs~d~~~g~~de-------~~R~~i~~la~lhf~~t~~~~~~L 137 (346)
T PF02350_consen 66 EKPDAVLVLGDRNEALAAALAAFYLNIP-VAHIEAGLRSGDRTEGMPDE-------INRHAIDKLAHLHFAPTEEARERL 137 (346)
T ss_dssp HT-SEEEEETTSHHHHHHHHHHHHTT-E-EEEES-----S-TTSSTTHH-------HHHHHHHHH-SEEEESSHHHHHHH
T ss_pred cCCCEEEEEcCCchHHHHHHHHHHhCCC-EEEecCCCCccccCCCCchh-------hhhhhhhhhhhhhccCCHHHHHHH
Confidence 999999999854322 333444588 56777531100000011111 222334556899999999999999
Q ss_pred HHHhccCCCCceeecCCC-CCCCCCC-CCCccch-h-hhcCCCCCCCCeEEEEeeccccc---CCHHHHHHHHHHHHhhc
Q psy12587 151 QATFRSLDHKCLDILYPS-VYTEGLE-KTTPEPI-E-NVLNPLPGKEDIVFLSINRYERK---KNLELAIYSLNSLRSRL 223 (390)
Q Consensus 151 ~~~~~~~~~~~~~vi~~~-~~~~~~~-~~~~~~~-~-~~~~~l~~~~~~~i~~~g~~~~~---K~~~~ll~a~~~l~~~~ 223 (390)
.+. +.+++++.++.|. +|.-... +...... . .... ...+++++++.-+.... .....+.++++.+.+.
T Consensus 138 ~~~--G~~~~rI~~vG~~~~D~l~~~~~~~~~~~~~~~i~~--~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~- 212 (346)
T PF02350_consen 138 LQE--GEPPERIFVVGNPGIDALLQNKEEIEEKYKNSGILQ--DAPKPYILVTLHPVTNEDNPERLEQILEALKALAER- 212 (346)
T ss_dssp HHT--T--GGGEEE---HHHHHHHHHHHTTCC-HHHHHHHH--CTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-
T ss_pred Hhc--CCCCCeEEEEChHHHHHHHHhHHHHhhhhhhHHHHh--ccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-
Confidence 996 5667899999986 3322111 0111111 0 1100 12356666666554432 3467788888888776
Q ss_pred ccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHH-h
Q psy12587 224 SDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPI-E 302 (390)
Q Consensus 224 ~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~-E 302 (390)
+ ++.+++.....+ .....+.+..+++ +++.+...++..++..+++.|+++|--| | .+. |
T Consensus 213 ~-----~~~vi~~~hn~p------~~~~~i~~~l~~~---~~v~~~~~l~~~~~l~ll~~a~~vvgdS-----s-GI~eE 272 (346)
T PF02350_consen 213 Q-----NVPVIFPLHNNP------RGSDIIIEKLKKY---DNVRLIEPLGYEEYLSLLKNADLVVGDS-----S-GIQEE 272 (346)
T ss_dssp T-----TEEEEEE--S-H------HHHHHHHHHHTT----TTEEEE----HHHHHHHHHHESEEEESS-----H-HHHHH
T ss_pred C-----CCcEEEEecCCc------hHHHHHHHHhccc---CCEEEECCCCHHHHHHHHhcceEEEEcC-----c-cHHHH
Confidence 3 377777765332 2225565555555 3899999999999999999999999654 4 666 9
Q ss_pred hhhcCCCEEEec-CCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHH
Q psy12587 303 AMFCKRPVIAVN-SGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIV 381 (390)
Q Consensus 303 a~a~G~pvi~~~-~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
|.++|+|+|.-. .+.-.+....+.+-+ +..|.+++.+++.+++++.. .+.++.. ....|.-...++++.+++
T Consensus 273 a~~lg~P~v~iR~~geRqe~r~~~~nvl-v~~~~~~I~~ai~~~l~~~~-~~~~~~~-----~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 273 APSLGKPVVNIRDSGERQEGRERGSNVL-VGTDPEAIIQAIEKALSDKD-FYRKLKN-----RPNPYGDGNASERIVEIL 345 (346)
T ss_dssp GGGGT--EEECSSS-S-HHHHHTTSEEE-ETSSHHHHHHHHHHHHH-HH-HHHHHHC-----S--TT-SS-HHHHHHHHH
T ss_pred HHHhCCeEEEecCCCCCHHHHhhcceEE-eCCCHHHHHHHHHHHHhChH-HHHhhcc-----CCCCCCCCcHHHHHHHhh
Confidence 999999999974 455666666665544 65699999999999998744 4444321 123455555666666655
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.4e-11 Score=93.77 Aligned_cols=158 Identities=15% Similarity=0.092 Sum_probs=104.0
Q ss_pred CCcchhhhHhh-HhhhhcCCceeec--CCc--cccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-c
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAH--DHC--FKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-E 75 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~--~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 75 (390)
.||.|+++.+| ..|.++||+|+|+ ... .....-.++.+..++. + ..+....+...+..+..++.....+ .
T Consensus 16 YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~~~y~gv~l~~i~~--~--~~g~~~si~yd~~sl~~al~~~~~~~~ 91 (185)
T PF09314_consen 16 YGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYKEFEYNGVRLVYIPA--P--KNGSAESIIYDFLSLLHALRFIKQDKI 91 (185)
T ss_pred cCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCCCcccCCeEEEEeCC--C--CCCchHHHHHHHHHHHHHHHHHhhccc
Confidence 69999999999 9999999999998 222 2233335555665532 1 1222222222222222222111111 4
Q ss_pred CCCEEEEcccc---cchhHHHhhc---ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHH
Q psy12587 76 KPDLVFCDLVS---ICIPILQAKQ---FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSV 149 (390)
Q Consensus 76 ~~Dvi~~~~~~---~~~~~~~~~~---~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 149 (390)
+.|+++++... +.+++.+..+ .|+++..|+.++....++.+. +..++.-|+.+.+.||.+|+-|+...++
T Consensus 92 ~~~ii~ilg~~~g~~~~~~~r~~~~~g~~v~vN~DGlEWkR~KW~~~~----k~~lk~~E~~avk~ad~lIaDs~~I~~y 167 (185)
T PF09314_consen 92 KYDIILILGYGIGPFFLPFLRKLRKKGGKVVVNMDGLEWKRAKWGRPA----KKYLKFSEKLAVKYADRLIADSKGIQDY 167 (185)
T ss_pred cCCEEEEEcCCccHHHHHHHHhhhhcCCcEEECCCcchhhhhhcCHHH----HHHHHHHHHHHHHhCCEEEEcCHHHHHH
Confidence 68899998854 2334444432 589999999876544444433 4445688899999999999999999999
Q ss_pred HHHHhccCCCCceeecCCCCC
Q psy12587 150 VQATFRSLDHKCLDILYPSVY 170 (390)
Q Consensus 150 ~~~~~~~~~~~~~~vi~~~~~ 170 (390)
+.+.|+ ..++.+|++|.|
T Consensus 168 ~~~~y~---~~~s~~IaYGad 185 (185)
T PF09314_consen 168 IKERYG---RKKSTFIAYGAD 185 (185)
T ss_pred HHHHcC---CCCcEEecCCCC
Confidence 999987 468999999865
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.4e-10 Score=103.54 Aligned_cols=134 Identities=15% Similarity=0.139 Sum_probs=87.4
Q ss_pred CCCeEEEEeeccccc---CCHHHHHHHHHHHHhhcccccccceE-EEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEE
Q psy12587 192 KEDIVFLSINRYERK---KNLELAIYSLNSLRSRLSDEMKTHVK-LVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVL 267 (390)
Q Consensus 192 ~~~~~i~~~g~~~~~---K~~~~ll~a~~~l~~~~~~~~~~~~~-l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~ 267 (390)
+++.+++..|+.... +-...+++++..+ . .+ ++.+|..... . ..++++|.
T Consensus 238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~----~------~~~i~~~g~~~~~--------~--------~~~~~~v~ 291 (401)
T cd03784 238 GRPPVYVGFGSMVVRDPEALARLDVEAVATL----G------QRAILSLGWGGLG--------A--------EDLPDNVR 291 (401)
T ss_pred CCCcEEEeCCCCcccCHHHHHHHHHHHHHHc----C------CeEEEEccCcccc--------c--------cCCCCceE
Confidence 466777888887542 2334445555443 1 33 4455544321 1 23468999
Q ss_pred EecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCC----cccceecCcceeeecC---CHHHHHH
Q psy12587 268 FLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGG----PKESVVDGRTGFLCES---NEEAFAK 340 (390)
Q Consensus 268 ~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~----~~e~i~~~~~g~~~~~---~~~~l~~ 340 (390)
+.++++.. .+|..||++|. .|...++.||+++|+|+|+.+..+ ..+.+...+.|..+.. +.+++.+
T Consensus 292 ~~~~~p~~---~ll~~~d~~I~----hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l~~ 364 (401)
T cd03784 292 VVDFVPHD---WLLPRCAAVVH----HGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAERLAA 364 (401)
T ss_pred EeCCCCHH---HHhhhhheeee----cCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHHHHHH
Confidence 99999866 57899999994 234579999999999999987643 2334445556766644 6899999
Q ss_pred HHHHHhcCChhHHHHHHHHH
Q psy12587 341 AMKKIVDNDGNIIQQFSQFG 360 (390)
Q Consensus 341 ~i~~l~~~~~~~~~~~~~~~ 360 (390)
++.++++++ .+++..+.+
T Consensus 365 al~~~l~~~--~~~~~~~~~ 382 (401)
T cd03784 365 ALRRLLDPP--SRRRAAALL 382 (401)
T ss_pred HHHHHhCHH--HHHHHHHHH
Confidence 999999843 344444333
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.8e-09 Score=90.47 Aligned_cols=281 Identities=18% Similarity=0.139 Sum_probs=176.7
Q ss_pred HHHHHHHHHHHHhhcCCCEEEEcccccchh----HHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCc
Q psy12587 61 LRMIVIALYVAWYSEKPDLVFCDLVSICIP----ILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKA 136 (390)
Q Consensus 61 ~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~----~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 136 (390)
.......+...+.+.+||+|.+|+-..... ++...++|+....-+.-..... +.. ....+..-.-|
T Consensus 77 t~~~i~~~~~vl~~~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt~~~~---~PE-------E~NR~l~~~~S 146 (383)
T COG0381 77 TGNIIEGLSKVLEEEKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRTGDLY---FPE-------EINRRLTSHLS 146 (383)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHHHhCCceEEEecccccCCCC---CcH-------HHHHHHHHHhh
Confidence 333333333323339999999998433222 2233347765433332111100 000 01112334458
Q ss_pred ceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCC----CCccchhhh-cCCCCCCCCeEEEEeeccccc-CCHH
Q psy12587 137 DKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEK----TTPEPIENV-LNPLPGKEDIVFLSINRYERK-KNLE 210 (390)
Q Consensus 137 d~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~----~~~~~~~~~-~~~l~~~~~~~i~~~g~~~~~-K~~~ 210 (390)
|.-+++++..++.+.+. +.+.+++.++.|.+-...... ......... +. ..+++.+++..-|-... +++.
T Consensus 147 ~~hfapte~ar~nLl~E--G~~~~~IfvtGnt~iDal~~~~~~~~~~~~~~~~~~~--~~~~~~iLvT~HRreN~~~~~~ 222 (383)
T COG0381 147 DLHFAPTEIARKNLLRE--GVPEKRIFVTGNTVIDALLNTRDRVLEDSKILAKGLD--DKDKKYILVTAHRRENVGEPLE 222 (383)
T ss_pred hhhcCChHHHHHHHHHc--CCCccceEEeCChHHHHHHHHHhhhccchhhHHhhhc--cccCcEEEEEcchhhcccccHH
Confidence 89999999999999986 666778999999842211111 111111111 22 34456777777776543 8999
Q ss_pred HHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHH-HHcCCCCcEEEecCCChHHHHHHHHhcceEEe
Q psy12587 211 LAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLV-KKLKLSDNVLFLTSPSDAAKISLFKFCHCIIY 289 (390)
Q Consensus 211 ~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~-~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ 289 (390)
.+++++.++.+++++ +.++.--. +. +.+++.. ..++-.++|.++.++...++..+++.|.+++-
T Consensus 223 ~i~~al~~i~~~~~~-----~~viyp~H-~~---------~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~ilt 287 (383)
T COG0381 223 EICEALREIAEEYPD-----VIVIYPVH-PR---------PRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFLILT 287 (383)
T ss_pred HHHHHHHHHHHhCCC-----ceEEEeCC-CC---------hhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceEEEe
Confidence 999999999998764 55544332 22 3444444 45555578999999999999999999987775
Q ss_pred CCCCCCCCccHHhhhhcCCCEEEecC-CCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhc
Q psy12587 290 TPSNEHFGIVPIEAMFCKRPVIAVNS-GGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKF 368 (390)
Q Consensus 290 ps~~e~~~~~~~Ea~a~G~pvi~~~~-~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~ 368 (390)
-| |...=||-.+|+||++-.. ..-+|.++.| +-.++..+.+.+.+++..++++++ .+++|+... ..|
T Consensus 288 DS-----GgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg~~~~~i~~~~~~ll~~~~-~~~~m~~~~-----npY 355 (383)
T COG0381 288 DS-----GGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVGTDEENILDAATELLEDEE-FYERMSNAK-----NPY 355 (383)
T ss_pred cC-----CchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeCccHHHHHHHHHHHhhChH-HHHHHhccc-----CCC
Confidence 44 6677899999999999654 5566766444 445555589999999999999999 888886533 344
Q ss_pred CHHHHHHHHHHHHH
Q psy12587 369 SFQAFSIQLNTIVN 382 (390)
Q Consensus 369 ~~~~~~~~~~~~~~ 382 (390)
.-....+++.+++.
T Consensus 356 gdg~as~rIv~~l~ 369 (383)
T COG0381 356 GDGNASERIVEILL 369 (383)
T ss_pred cCcchHHHHHHHHH
Confidence 44444455555544
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.4e-08 Score=84.82 Aligned_cols=271 Identities=11% Similarity=0.083 Sum_probs=168.4
Q ss_pred cCCCEEEEccc-ccchhHHHhhc----ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHH
Q psy12587 75 EKPDLVFCDLV-SICIPILQAKQ----FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSV 149 (390)
Q Consensus 75 ~~~Dvi~~~~~-~~~~~~~~~~~----~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 149 (390)
.+.+-+++|+. ...+..+.+.+ .++.|++.+-|.+ ....++. .++...+.+.+.++..+|++ +......
T Consensus 38 ~r~~rff~HGqFn~~lwlall~g~~~~~q~yWhiWGaDLY-e~~~~lk----~rlfy~lRR~aq~rvg~v~a-trGD~~~ 111 (322)
T PRK02797 38 NRAQRFFLHGQFNPTLWLALLSGKIKPKQFYWHIWGADLY-EESKGLK----FRLFYPLRRLAQKRVGHVFA-TRGDLSY 111 (322)
T ss_pred CccceEEEecCCCHHHHHHHHhCCcCccceEEEEEChhhh-hcccchh----HHHHHHHHHHHHhhcCeEEE-ecchHHH
Confidence 78888899984 33333333333 5677777776654 2112222 33444667788889999999 7777777
Q ss_pred HHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecc-cccCCHHHHHHHHHHHHhhcccccc
Q psy12587 150 VQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRY-ERKKNLELAIYSLNSLRSRLSDEMK 228 (390)
Q Consensus 150 ~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~-~~~K~~~~ll~a~~~l~~~~~~~~~ 228 (390)
+.+..++. +.+....|.-.++.. .....+ . ..+++++ +.+|+- ++.-++..+++++++....
T Consensus 112 ~a~~~~~v-~~~llyfpt~m~~~l-~~~~~~---~-----~~~~~~t-IlvGNSgd~SN~Hie~L~~l~~~~~~------ 174 (322)
T PRK02797 112 FAQRHPKV-PGSLLYFPTRMDPSL-NTMAND---R-----QRAGKMT-ILVGNSGDRSNRHIEALRALHQQFGD------ 174 (322)
T ss_pred HHHhcCCC-CccEEecCCcchhhh-cccccc---c-----cCCCceE-EEEeCCCCCcccHHHHHHHHHHHhCC------
Confidence 65544444 233433333333221 111100 0 2224455 445554 4666777778888776543
Q ss_pred cceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEE-ecCCChHHHHHHHHhcceEEeCC-CCCCCCccHHhhhhc
Q psy12587 229 THVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLF-LTSPSDAAKISLFKFCHCIIYTP-SNEHFGIVPIEAMFC 306 (390)
Q Consensus 229 ~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~-~g~~~~~e~~~~~~~adv~v~ps-~~e~~~~~~~Ea~a~ 306 (390)
++++++-=+.+. .++.|.+++++..+++--++++.. ..+++-+|..++++.||+.++.- +..|.|+..+ .+.+
T Consensus 175 -~v~ii~PlsYp~---gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~l-Li~~ 249 (322)
T PRK02797 175 -NVKIIVPMGYPA---NNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCL-LIQL 249 (322)
T ss_pred -CeEEEEECCcCC---CCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHH-HHHC
Confidence 577776544432 246899999999999875466765 57799999999999999988764 4678887666 8999
Q ss_pred CCCEEEecC-CCcccceecCcceeeecC---CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q psy12587 307 KRPVIAVNS-GGPKESVVDGRTGFLCES---NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVN 382 (390)
Q Consensus 307 G~pvi~~~~-~~~~e~i~~~~~g~~~~~---~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
|+||+.+.. +...++.+.+ .-++++. |...+.+ ..+++....++.+. |+.+...+.|.++++
T Consensus 250 G~~v~l~r~n~fwqdl~e~g-v~Vlf~~d~L~~~~v~e-----------~~rql~~~dk~~I~--Ff~pn~~~~W~~~l~ 315 (322)
T PRK02797 250 GKPVVLSRDNPFWQDLTEQG-LPVLFTGDDLDEDIVRE-----------AQRQLASVDKNIIA--FFSPNYLQGWRNALA 315 (322)
T ss_pred CCcEEEecCCchHHHHHhCC-CeEEecCCcccHHHHHH-----------HHHHHHhhCcceee--ecCHhHHHHHHHHHH
Confidence 999999865 4445544443 3333433 3222222 23344455555553 999999999999998
Q ss_pred hhhhh
Q psy12587 383 NMLDK 387 (390)
Q Consensus 383 ~~~~~ 387 (390)
....+
T Consensus 316 ~~~g~ 320 (322)
T PRK02797 316 IAAGE 320 (322)
T ss_pred HhhCC
Confidence 76544
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.8e-09 Score=93.25 Aligned_cols=82 Identities=20% Similarity=0.116 Sum_probs=59.5
Q ss_pred CCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCccc------ceecCcceeeecC-CH
Q psy12587 263 SDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKE------SVVDGRTGFLCES-NE 335 (390)
Q Consensus 263 ~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e------~i~~~~~g~~~~~-~~ 335 (390)
++++.+.++.+ +++.++|..||++|.-+ ...++.||+++|+|+|..+..+..| .+.+.+.|..++. +.
T Consensus 228 ~~~v~~~~~~~-~~~~~~l~~ad~vI~~~----G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~ 302 (321)
T TIGR00661 228 NENVEIRRITT-DNFKELIKNAELVITHG----GFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL 302 (321)
T ss_pred CCCEEEEECCh-HHHHHHHHhCCEEEECC----ChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH
Confidence 47899888776 67789999999999754 2346899999999999988765434 3445556777766 55
Q ss_pred HHHHHHHHHHhcCCh
Q psy12587 336 EAFAKAMKKIVDNDG 350 (390)
Q Consensus 336 ~~l~~~i~~l~~~~~ 350 (390)
++.+++...++++.
T Consensus 303 -~~~~~~~~~~~~~~ 316 (321)
T TIGR00661 303 -RLLEAILDIRNMKR 316 (321)
T ss_pred -HHHHHHHhcccccc
Confidence 55556655555543
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=99.23 E-value=9.2e-10 Score=94.63 Aligned_cols=244 Identities=14% Similarity=0.115 Sum_probs=139.6
Q ss_pred CCcchhhhHhh-HhhhhcCCceeec-CCc----cccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAH-DHC----FKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS- 74 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~-~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 74 (390)
..|.-.++..| ++|.++|++|+.+ ... .......+..+..++.... ....... ...+++
T Consensus 13 G~GHv~Rcl~LA~~l~~~g~~v~f~~~~~~~~~~~~i~~~g~~v~~~~~~~~-----~~~d~~~---------~~~~l~~ 78 (279)
T TIGR03590 13 GLGHVMRCLTLARALHAQGAEVAFACKPLPGDLIDLLLSAGFPVYELPDESS-----RYDDALE---------LINLLEE 78 (279)
T ss_pred cccHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHcCCeEEEecCCCc-----hhhhHHH---------HHHHHHh
Confidence 34777788999 9999999999888 211 1223355566665532110 0000001 112444
Q ss_pred cCCCEEEEcccccchhHHHhhc--ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHH
Q psy12587 75 EKPDLVFCDLVSICIPILQAKQ--FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQA 152 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~~~~~--~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~ 152 (390)
.+||+|++.++..........+ .+.++.+-+.... -..||.++-.+.. .+..
T Consensus 79 ~~~d~vV~D~y~~~~~~~~~~k~~~~~l~~iDD~~~~-----------------------~~~~D~vin~~~~-~~~~-- 132 (279)
T TIGR03590 79 EKFDILIVDHYGLDADWEKLIKEFGRKILVIDDLADR-----------------------PHDCDLLLDQNLG-ADAS-- 132 (279)
T ss_pred cCCCEEEEcCCCCCHHHHHHHHHhCCeEEEEecCCCC-----------------------CcCCCEEEeCCCC-cCHh--
Confidence 7999999988643332222222 4444455543210 0157888877764 2221
Q ss_pred Hhcc-CCCCceeecCC---CCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccc
Q psy12587 153 TFRS-LDHKCLDILYP---SVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMK 228 (390)
Q Consensus 153 ~~~~-~~~~~~~vi~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~ 228 (390)
.|.+ .+......... .+..++....+.. .. ..+.+.++++.|...+.+....+++++..+....
T Consensus 133 ~y~~~~~~~~~~l~G~~Y~~lr~eF~~~~~~~-~~------~~~~~~iLi~~GG~d~~~~~~~~l~~l~~~~~~~----- 200 (279)
T TIGR03590 133 DYQGLVPANCRLLLGPSYALLREEFYQLATAN-KR------RKPLRRVLVSFGGADPDNLTLKLLSALAESQINI----- 200 (279)
T ss_pred HhcccCcCCCeEEecchHHhhhHHHHHhhHhh-hc------ccccCeEEEEeCCcCCcCHHHHHHHHHhccccCc-----
Confidence 1222 22333444433 2333222211100 00 1113457788888777766677888887653221
Q ss_pred cceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCC
Q psy12587 229 THVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKR 308 (390)
Q Consensus 229 ~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~ 308 (390)
++.+ ++|.+... .+++++.++.. +++.+.+++++ +.++|+.||++|.+ .|.++.|++++|+
T Consensus 201 -~i~v-v~G~~~~~-------~~~l~~~~~~~---~~i~~~~~~~~--m~~lm~~aDl~Is~-----~G~T~~E~~a~g~ 261 (279)
T TIGR03590 201 -SITL-VTGSSNPN-------LDELKKFAKEY---PNIILFIDVEN--MAELMNEADLAIGA-----AGSTSWERCCLGL 261 (279)
T ss_pred -eEEE-EECCCCcC-------HHHHHHHHHhC---CCEEEEeCHHH--HHHHHHHCCEEEEC-----CchHHHHHHHcCC
Confidence 1333 67766432 26777777653 47888888764 58999999999974 4689999999999
Q ss_pred CEEEecCC
Q psy12587 309 PVIAVNSG 316 (390)
Q Consensus 309 pvi~~~~~ 316 (390)
|+|+....
T Consensus 262 P~i~i~~~ 269 (279)
T TIGR03590 262 PSLAICLA 269 (279)
T ss_pred CEEEEEec
Confidence 99997653
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.4e-09 Score=97.61 Aligned_cols=186 Identities=13% Similarity=0.169 Sum_probs=124.7
Q ss_pred cchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHH
Q psy12587 180 EPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKK 259 (390)
Q Consensus 180 ~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~ 259 (390)
...|+.++ ||+ +.++|+.+.++ .|-.+..++++.++.++.|+ .+|++....... .+.+++.+++
T Consensus 273 ~~~R~~~g-Lp~-d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~-----S~L~L~~~~~~~-------~~~l~~~~~~ 336 (468)
T PF13844_consen 273 VTTRAQYG-LPE-DAVVFGSFNNL--FKISPETLDLWARILKAVPN-----SRLWLLRFPASG-------EARLRRRFAA 336 (468)
T ss_dssp EEETGGGT---S-SSEEEEE-S-G--GG--HHHHHHHHHHHHHSTT-----EEEEEEETSTTH-------HHHHHHHHHH
T ss_pred ccCHHHcC-CCC-CceEEEecCcc--ccCCHHHHHHHHHHHHhCCC-----cEEEEeeCCHHH-------HHHHHHHHHH
Confidence 44566776 565 77777766664 47789999999999999996 888776543221 2678888889
Q ss_pred cCCC-CcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccc-----eec-Ccceeeec
Q psy12587 260 LKLS-DNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKES-----VVD-GRTGFLCE 332 (390)
Q Consensus 260 ~~l~-~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~-----i~~-~~~g~~~~ 332 (390)
.|++ +++.|.+..+.++....++.+|+++-+. .-+.+.+.+||+.+|+|||+-....+..- +.. |-..++..
T Consensus 337 ~Gv~~~Ri~f~~~~~~~ehl~~~~~~DI~LDT~-p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~ 415 (468)
T PF13844_consen 337 HGVDPDRIIFSPVAPREEHLRRYQLADICLDTF-PYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIAD 415 (468)
T ss_dssp TTS-GGGEEEEE---HHHHHHHGGG-SEEE--S-SS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-S
T ss_pred cCCChhhEEEcCCCCHHHHHHHhhhCCEEeeCC-CCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCC
Confidence 9985 7899999999888888999999999764 34457889999999999999664333221 111 22334455
Q ss_pred CCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHh--hhcCHHHHHHHHHHHHHhh
Q psy12587 333 SNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFN--EKFSFQAFSIQLNTIVNNM 384 (390)
Q Consensus 333 ~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 384 (390)
|.+++.+...++.+|++ .++++++..++... .-|+...+++.+++.|+++
T Consensus 416 -s~~eYv~~Av~La~D~~-~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 416 -SEEEYVEIAVRLATDPE-RLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp -SHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHhCCHH-HHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 89999999999999999 89999888776553 3589999999999999875
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.7e-09 Score=90.88 Aligned_cols=242 Identities=13% Similarity=0.139 Sum_probs=151.9
Q ss_pred cCCCEEEEcc-cccchhHHHhhc-----ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHH
Q psy12587 75 EKPDLVFCDL-VSICIPILQAKQ-----FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKS 148 (390)
Q Consensus 75 ~~~Dvi~~~~-~~~~~~~~~~~~-----~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~ 148 (390)
.+||++++-+ +.+.+.+.+..+ +|+|+++- |..|.+.... ...+.+.+|.+.+.=++..+
T Consensus 84 ~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~-PsVWAWr~~R-------------a~~i~~~~D~lLailPFE~~ 149 (381)
T COG0763 84 NKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS-PSVWAWRPKR-------------AVKIAKYVDHLLAILPFEPA 149 (381)
T ss_pred cCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC-cceeeechhh-------------HHHHHHHhhHeeeecCCCHH
Confidence 9999998766 556666554433 66665543 3333333211 13345678999999999999
Q ss_pred HHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccc--cCCHHHHHHHHHHHHhhcccc
Q psy12587 149 VVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYER--KKNLELAIYSLNSLRSRLSDE 226 (390)
Q Consensus 149 ~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~--~K~~~~ll~a~~~l~~~~~~~ 226 (390)
.+.+. + .+++.+.++.-....-...+...++.++ ++.+.+.+.+..|+-.. .+....+.++++.++.+.|+
T Consensus 150 ~y~k~--g---~~~~yVGHpl~d~i~~~~~r~~ar~~l~-~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~- 222 (381)
T COG0763 150 FYDKF--G---LPCTYVGHPLADEIPLLPDREAAREKLG-IDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPD- 222 (381)
T ss_pred HHHhc--C---CCeEEeCChhhhhccccccHHHHHHHhC-CCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCC-
Confidence 88885 2 3578888875433222223444677775 56667777788886532 45677889999999999886
Q ss_pred cccceEEEEEcCCCCCCcchhHHHHHHHHHHH-HcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhh
Q psy12587 227 MKTHVKLVVAGGYDPHNIENVEYYKELGVLVK-KLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMF 305 (390)
Q Consensus 227 ~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~-~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a 305 (390)
.++++--.... | +.++.... .......+. +.+.+..+.|..||+.+..| |++.+|++.
T Consensus 223 ----~~~vlp~~~~~-------~-~~~~~~~~~~~~~~~~~~----~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL 281 (381)
T COG0763 223 ----LKFVLPLVNAK-------Y-RRIIEEALKWEVAGLSLI----LIDGEKRKAFAAADAALAAS-----GTATLEAAL 281 (381)
T ss_pred ----ceEEEecCcHH-------H-HHHHHHHhhccccCceEE----ecCchHHHHHHHhhHHHHhc-----cHHHHHHHH
Confidence 88888665432 1 23332222 221111122 33445578999999988866 899999999
Q ss_pred cCCCEEEecC-C----------------CcccceecCcc--eeeecC-CHHHHHHHHHHHhcCChhHHHHHHHH
Q psy12587 306 CKRPVIAVNS-G----------------GPKESVVDGRT--GFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQF 359 (390)
Q Consensus 306 ~G~pvi~~~~-~----------------~~~e~i~~~~~--g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~ 359 (390)
+|+|.|++-. . +.+.++-+... -++-.. .++.+++++..++.|.. .++.+.+.
T Consensus 282 ~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~-~~~~~~~~ 354 (381)
T COG0763 282 AGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGD-RREALKEK 354 (381)
T ss_pred hCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChH-hHHHHHHH
Confidence 9999988532 2 22222211110 011122 68999999999999985 55555443
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.6e-08 Score=90.70 Aligned_cols=272 Identities=15% Similarity=0.146 Sum_probs=172.9
Q ss_pred cCCCEEEEcccc---cchhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHH
Q psy12587 75 EKPDLVFCDLVS---ICIPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQ 151 (390)
Q Consensus 75 ~~~Dvi~~~~~~---~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 151 (390)
-..||.+--+.. .-..+...+..|+.+++-+...-... .... +=-+|..+.+ +....++.
T Consensus 334 d~IdILvDl~g~T~d~r~~v~A~RpAPiqvswlGy~aT~g~--p~~D--------------Y~I~D~y~vP-p~ae~yys 396 (620)
T COG3914 334 DGIDILVDLDGHTVDTRCQVFAHRPAPIQVSWLGYPATTGS--PNMD--------------YFISDPYTVP-PTAEEYYS 396 (620)
T ss_pred cCCeEEEeccCceeccchhhhhcCCCceEEeecccccccCC--Ccce--------------EEeeCceecC-chHHHHHH
Confidence 778888754422 12223333337888877654321110 0000 0124555555 55666666
Q ss_pred HHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccce
Q psy12587 152 ATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHV 231 (390)
Q Consensus 152 ~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~ 231 (390)
+..-.++ ..+.+. +.+.+..+...+..+| +|+ +.+++++.++ ..|-...+++.+.++.+.-|+ -
T Consensus 397 Ekl~RLp-----~cy~p~--d~~~~v~p~~sR~~lg-lp~-~avVf~c~~n--~~K~~pev~~~wmqIL~~vP~-----S 460 (620)
T COG3914 397 EKLWRLP-----QCYQPV--DGFEPVTPPPSRAQLG-LPE-DAVVFCCFNN--YFKITPEVFALWMQILSAVPN-----S 460 (620)
T ss_pred HHHHhcc-----cccCCC--CCcccCCCCcchhhcC-CCC-CeEEEEecCC--cccCCHHHHHHHHHHHHhCCC-----c
Confidence 6433221 112222 2333333334455555 454 6666555554 567889999999999999986 7
Q ss_pred EEEEEcCCCCCCcchhHHHHHHHHHHHHcCC-CCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCE
Q psy12587 232 KLVVAGGYDPHNIENVEYYKELGVLVKKLKL-SDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPV 310 (390)
Q Consensus 232 ~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l-~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pv 310 (390)
.|++.|+++.. .....+++++++.|+ .++..|.+..++++....|.-||+++-+. .-+...+.+||+.+|+||
T Consensus 461 vl~L~~~~~~~-----~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~~iADlvLDTy-PY~g~TTa~daLwm~vPV 534 (620)
T COG3914 461 VLLLKAGGDDA-----EINARLRDLAEREGVDSERLRFLPPAPNEDHRARYGIADLVLDTY-PYGGHTTASDALWMGVPV 534 (620)
T ss_pred EEEEecCCCcH-----HHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhhchhheeeecc-cCCCccchHHHHHhcCce
Confidence 88888887543 556889999999998 47899999999999999999999998643 345567899999999999
Q ss_pred EEecCCCc-----ccceec-CcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhh--hcCHHHHHHHHHHHHH
Q psy12587 311 IAVNSGGP-----KESVVD-GRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNE--KFSFQAFSIQLNTIVN 382 (390)
Q Consensus 311 i~~~~~~~-----~e~i~~-~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 382 (390)
|+-....+ ..++.+ |..-.++. +.++.++.-..+-+|.. .+++.+..-++.... -|+.+.+++++.++|.
T Consensus 535 lT~~G~~FasR~~~si~~~agi~e~vA~-s~~dYV~~av~~g~dra-l~q~~r~~l~~~r~tspL~d~~~far~le~~y~ 612 (620)
T COG3914 535 LTRVGEQFASRNGASIATNAGIPELVAD-SRADYVEKAVAFGSDRA-LRQQVRAELKRSRQTSPLFDPKAFARKLETLYW 612 (620)
T ss_pred eeeccHHHHHhhhHHHHHhcCCchhhcC-CHHHHHHHHHHhcccHH-HHHhhHHHHHhccccCcccCHHHHHHHHHHHHH
Confidence 99542111 112221 22334455 67777777777777776 666665444433322 6899999999999999
Q ss_pred hhhhh
Q psy12587 383 NMLDK 387 (390)
Q Consensus 383 ~~~~~ 387 (390)
++...
T Consensus 613 ~M~~~ 617 (620)
T COG3914 613 GMWSE 617 (620)
T ss_pred HHHHh
Confidence 87653
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=99.13 E-value=8.6e-08 Score=81.40 Aligned_cols=269 Identities=12% Similarity=0.072 Sum_probs=166.1
Q ss_pred cCCCEEEEcccc-cchhHHHhhc----ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHH
Q psy12587 75 EKPDLVFCDLVS-ICIPILQAKQ----FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSV 149 (390)
Q Consensus 75 ~~~Dvi~~~~~~-~~~~~~~~~~----~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 149 (390)
.+.+-++.|+.. ..+.++.+.+ .++.|++.+-|.+... .+ +..++...+.+.+.++.-.|++ ++.....
T Consensus 77 ~r~~kff~HGqFn~~lwlaLl~g~~~~~k~~WhIWGaDLYe~~-~~----~k~rlfy~lRr~aq~rvg~V~a-t~GDl~~ 150 (360)
T PF07429_consen 77 DRADKFFLHGQFNPWLWLALLFGKIKLKKCYWHIWGADLYEDS-RS----LKFRLFYFLRRLAQKRVGHVFA-TRGDLAY 150 (360)
T ss_pred CccceEEEeccCcHHHHHHHHcCCccccceEEEEeCchhhccc-cc----cchhHHHHHHHHHHhhcCeEEE-EcchHHH
Confidence 789999999843 3333333333 6778888876665432 12 2222334566777778888765 6888899
Q ss_pred HHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecc-cccCCHHHHHHHHHHHHhhcccccc
Q psy12587 150 VQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRY-ERKKNLELAIYSLNSLRSRLSDEMK 228 (390)
Q Consensus 150 ~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~-~~~K~~~~ll~a~~~l~~~~~~~~~ 228 (390)
+++.|+..+ ......|..++.......... ...++.. +.+|+- ++.-++-.+++++++....
T Consensus 151 ~~q~~~~~~-~~~lyfPt~m~~~~~~~~~~~---------~~~~~lt-ILvGNSgd~sNnHieaL~~L~~~~~~------ 213 (360)
T PF07429_consen 151 FQQRYPRVP-ASLLYFPTRMDPALTLSEKNK---------KNKGKLT-ILVGNSGDPSNNHIEALEALKQQFGD------ 213 (360)
T ss_pred HHHHcCCCC-ceEEEcCCCCchhhhcccccc---------CCCCceE-EEEcCCCCCCccHHHHHHHHHHhcCC------
Confidence 999988663 334444544544322211100 1124445 445554 4566677777777664332
Q ss_pred cceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEE-ecCCChHHHHHHHHhcceEEeCCC-CCCCCccHHhhhhc
Q psy12587 229 THVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLF-LTSPSDAAKISLFKFCHCIIYTPS-NEHFGIVPIEAMFC 306 (390)
Q Consensus 229 ~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~-~g~~~~~e~~~~~~~adv~v~ps~-~e~~~~~~~Ea~a~ 306 (390)
++++++-=+.+. .+++|.+++.+.++++--.+++.. ..+++-+|..++++.||+.++... ..|.|+..+ .+.+
T Consensus 214 -~~kIivPLsYg~---~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~ 288 (360)
T PF07429_consen 214 -DVKIIVPLSYGA---NNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL 288 (360)
T ss_pred -CeEEEEECCCCC---chHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc
Confidence 477665333221 145899999999998754567765 578999999999999999999865 577887665 9999
Q ss_pred CCCEEEecCCCcccceecCcceeeec--C-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHh
Q psy12587 307 KRPVIAVNSGGPKESVVDGRTGFLCE--S-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNN 383 (390)
Q Consensus 307 G~pvi~~~~~~~~e~i~~~~~g~~~~--~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
|+||+.+........+.+..--+++. . |...+.++=+++..-+. +.+ .|......+.|.+.+.-
T Consensus 289 G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql~~~dk-----------~~i--aFf~pny~~~w~~~l~~ 355 (360)
T PF07429_consen 289 GKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQLANVDK-----------QQI--AFFAPNYLQGWRQALRL 355 (360)
T ss_pred CCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHHhhCcc-----------cce--eeeCCchHHHHHHHHHH
Confidence 99999988776666665544334443 2 55555555444433222 222 24445556666665544
Q ss_pred h
Q psy12587 384 M 384 (390)
Q Consensus 384 ~ 384 (390)
+
T Consensus 356 ~ 356 (360)
T PF07429_consen 356 A 356 (360)
T ss_pred H
Confidence 3
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.13 E-value=2e-08 Score=92.38 Aligned_cols=243 Identities=14% Similarity=0.175 Sum_probs=144.5
Q ss_pred cCCCEEEEcc-cccchhHHHhhc---c--cEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHH
Q psy12587 75 EKPDLVFCDL-VSICIPILQAKQ---F--KVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKS 148 (390)
Q Consensus 75 ~~~Dvi~~~~-~~~~~~~~~~~~---~--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~ 148 (390)
++||+++.-+ +.+.+.+++..+ + |+|+++ .|..|.+... -.+.+-+.+|.+++.=+...+
T Consensus 309 ~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYV-sPqVWAWR~~-------------Rikki~k~vD~ll~IfPFE~~ 374 (608)
T PRK01021 309 TNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYV-CPSIWAWRPK-------------RKTILEKYLDLLLLILPFEQN 374 (608)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEE-CccceeeCcc-------------hHHHHHHHhhhheecCccCHH
Confidence 8999998855 666676665544 3 766655 3444443321 113334567999999999999
Q ss_pred HHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeeccc--ccCCHHHHHHHHH--HHHhhcc
Q psy12587 149 VVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYE--RKKNLELAIYSLN--SLRSRLS 224 (390)
Q Consensus 149 ~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~--~~K~~~~ll~a~~--~l~~~~~ 224 (390)
.+++. .-++..+.|+.-...-........+++++ ++++.+.+-+..|+-. -.+....++++++ .+.+
T Consensus 375 ~y~~~-----gv~v~yVGHPL~d~i~~~~~~~~~r~~lg-l~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~--- 445 (608)
T PRK01021 375 LFKDS-----PLRTVYLGHPLVETISSFSPNLSWKEQLH-LPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLAS--- 445 (608)
T ss_pred HHHhc-----CCCeEEECCcHHhhcccCCCHHHHHHHcC-CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhcc---
Confidence 99875 34788888885332111223344455554 3444566767788643 2456677788887 4433
Q ss_pred cccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhh
Q psy12587 225 DEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAM 304 (390)
Q Consensus 225 ~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~ 304 (390)
+.++++....+ .+.+.+++..+..++ -.+.+.. ..+-.++|+.||+.+..| |++.+|++
T Consensus 446 -----~l~fvvp~a~~-------~~~~~i~~~~~~~~~-~~~~ii~---~~~~~~~m~aaD~aLaaS-----GTaTLEaA 504 (608)
T PRK01021 446 -----THQLLVSSANP-------KYDHLILEVLQQEGC-LHSHIVP---SQFRYELMRECDCALAKC-----GTIVLETA 504 (608)
T ss_pred -----CeEEEEecCch-------hhHHHHHHHHhhcCC-CCeEEec---CcchHHHHHhcCeeeecC-----CHHHHHHH
Confidence 26776643221 112455555543321 1223321 111258999999999877 99999999
Q ss_pred hcCCCEEEec-CCCc------------------ccceecCc--ceee--ecC-CHHHHHHHHHHHhcCChhHHHHHHHHH
Q psy12587 305 FCKRPVIAVN-SGGP------------------KESVVDGR--TGFL--CES-NEEAFAKAMKKIVDNDGNIIQQFSQFG 360 (390)
Q Consensus 305 a~G~pvi~~~-~~~~------------------~e~i~~~~--~g~~--~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~ 360 (390)
.+|+|.|+.- .+.. +.++-+.. .-++ -++ +++.+++++ +++.|++ .++++.+..
T Consensus 505 L~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~-~r~~~~~~l 582 (608)
T PRK01021 505 LNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQ-SKEKQKDAC 582 (608)
T ss_pred HhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHH-HHHHHHHHH
Confidence 9999988832 2211 11111111 1122 134 899999996 8888887 777776555
Q ss_pred HHH
Q psy12587 361 FNR 363 (390)
Q Consensus 361 ~~~ 363 (390)
.+.
T Consensus 583 ~~l 585 (608)
T PRK01021 583 RDL 585 (608)
T ss_pred HHH
Confidence 443
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.2e-08 Score=87.03 Aligned_cols=277 Identities=14% Similarity=0.170 Sum_probs=155.7
Q ss_pred hhHhh-HhhhhcCCceeec----CCccccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cCCCEEE
Q psy12587 8 LTITA-TAWGATGPRTTAH----DHCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EKPDLVF 81 (390)
Q Consensus 8 ~~~~l-~~L~~~G~~V~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dvi~ 81 (390)
+...+ +.|.++||+|.+. +....-....++++..+.... .+...++.. ..... ..+. .+++ ++||+++
T Consensus 15 fFk~~I~eL~~~GheV~it~R~~~~~~~LL~~yg~~y~~iG~~g-~~~~~Kl~~---~~~R~-~~l~-~~~~~~~pDv~i 88 (335)
T PF04007_consen 15 FFKNIIRELEKRGHEVLITARDKDETEELLDLYGIDYIVIGKHG-DSLYGKLLE---SIERQ-YKLL-KLIKKFKPDVAI 88 (335)
T ss_pred HHHHHHHHHHhCCCEEEEEEeccchHHHHHHHcCCCeEEEcCCC-CCHHHHHHH---HHHHH-HHHH-HHHHhhCCCEEE
Confidence 45677 9999999998776 222222344567777664322 222222211 11111 1111 2344 8999999
Q ss_pred EcccccchhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHHhccCCCCc
Q psy12587 82 CDLVSICIPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKC 161 (390)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~ 161 (390)
+.+...+..+++..++|.|....+..... ..+..+..||.++++.-.-.+.+.+. + .+
T Consensus 89 s~~s~~a~~va~~lgiP~I~f~D~e~a~~-----------------~~~Lt~Pla~~i~~P~~~~~~~~~~~-G---~~- 146 (335)
T PF04007_consen 89 SFGSPEAARVAFGLGIPSIVFNDTEHAIA-----------------QNRLTLPLADVIITPEAIPKEFLKRF-G---AK- 146 (335)
T ss_pred ecCcHHHHHHHHHhCCCeEEEecCchhhc-----------------cceeehhcCCeeECCcccCHHHHHhc-C---Cc-
Confidence 98876666677888899998887643211 11233557899999876555554443 2 22
Q ss_pred eeec-CCCCCCCC----CCCCCccchhhhcCCCCCCCCeEEEEeecccc--cCCH-HHHHHHHHHHHhhcccccccceEE
Q psy12587 162 LDIL-YPSVYTEG----LEKTTPEPIENVLNPLPGKEDIVFLSINRYER--KKNL-ELAIYSLNSLRSRLSDEMKTHVKL 233 (390)
Q Consensus 162 ~~vi-~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~--~K~~-~~ll~a~~~l~~~~~~~~~~~~~l 233 (390)
-++. ++|++... |.+ .....+.++ +. +++++++=...+.. .++- ..+-+.++.+.+... . +
T Consensus 147 ~~i~~y~G~~E~ayl~~F~P--d~~vl~~lg-~~-~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~------~-v 215 (335)
T PF04007_consen 147 NQIRTYNGYKELAYLHPFKP--DPEVLKELG-LD-DEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGR------N-V 215 (335)
T ss_pred CCEEEECCeeeEEeecCCCC--ChhHHHHcC-CC-CCCEEEEEeccccCeeecCccchHHHHHHHHHhhCc------e-E
Confidence 3444 77765432 332 344555565 23 35555552222211 1122 334466666666532 3 6
Q ss_pred EEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEe
Q psy12587 234 VVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAV 313 (390)
Q Consensus 234 ~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~ 313 (390)
+++.+.... . ...++++ +.+... ..+..+++..||++|.- .|+...||...|+|.|.+
T Consensus 216 V~ipr~~~~--------~---~~~~~~~----~~i~~~--~vd~~~Ll~~a~l~Ig~-----ggTMa~EAA~LGtPaIs~ 273 (335)
T PF04007_consen 216 VIIPRYEDQ--------R---ELFEKYG----VIIPPE--PVDGLDLLYYADLVIGG-----GGTMAREAALLGTPAISC 273 (335)
T ss_pred EEecCCcch--------h---hHHhccC----ccccCC--CCCHHHHHHhcCEEEeC-----CcHHHHHHHHhCCCEEEe
Confidence 666655432 2 2223332 333222 11335899999999953 366789999999999997
Q ss_pred cCC---CcccceecCcceeeecC-CHHHHHHHHHHHhc
Q psy12587 314 NSG---GPKESVVDGRTGFLCES-NEEAFAKAMKKIVD 347 (390)
Q Consensus 314 ~~~---~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~ 347 (390)
-.+ +..+++.+ .|+++.. |++++.+.+.....
T Consensus 274 ~~g~~~~vd~~L~~--~Gll~~~~~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 274 FPGKLLAVDKYLIE--KGLLYHSTDPDEIVEYVRKNLG 309 (335)
T ss_pred cCCcchhHHHHHHH--CCCeEecCCHHHHHHHHHHhhh
Confidence 543 23344433 4777776 99998886666443
|
They are found in archaea and some bacteria and have no known function. |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.9e-07 Score=84.47 Aligned_cols=160 Identities=17% Similarity=0.204 Sum_probs=106.1
Q ss_pred CCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEe
Q psy12587 190 PGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFL 269 (390)
Q Consensus 190 ~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~ 269 (390)
+.+.+++.+..|+.... ..+++.+.......+ .++++...+ .. . ..-++++|+...
T Consensus 234 ~~d~~~vyvslGt~~~~---~~l~~~~~~a~~~l~------~~vi~~~~~-~~--------~------~~~~~p~n~~v~ 289 (406)
T COG1819 234 PADRPIVYVSLGTVGNA---VELLAIVLEALADLD------VRVIVSLGG-AR--------D------TLVNVPDNVIVA 289 (406)
T ss_pred cCCCCeEEEEcCCcccH---HHHHHHHHHHHhcCC------cEEEEeccc-cc--------c------ccccCCCceEEe
Confidence 44466777777776644 444444444444333 566666544 21 1 123457899999
Q ss_pred cCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCC----CcccceecCcceeeec--C-CHHHHHHHH
Q psy12587 270 TSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSG----GPKESVVDGRTGFLCE--S-NEEAFAKAM 342 (390)
Q Consensus 270 g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~----~~~e~i~~~~~g~~~~--~-~~~~l~~~i 342 (390)
++++.. .++..||++|+.. ...++.||+.+|+|+|+-+.+ ...+.+++-..|.... . +++.++++|
T Consensus 290 ~~~p~~---~~l~~ad~vI~hG----G~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av 362 (406)
T COG1819 290 DYVPQL---ELLPRADAVIHHG----GAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRAAV 362 (406)
T ss_pred cCCCHH---HHhhhcCEEEecC----CcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHHHH
Confidence 999998 4899999999744 456899999999999996653 2344556667787776 5 999999999
Q ss_pred HHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q psy12587 343 KKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVN 382 (390)
Q Consensus 343 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
.++++++. .++.. +...+.+.+.-..+..++.+.+...
T Consensus 363 ~~vL~~~~-~~~~~-~~~~~~~~~~~g~~~~a~~le~~~~ 400 (406)
T COG1819 363 NEVLADDS-YRRAA-ERLAEEFKEEDGPAKAADLLEEFAR 400 (406)
T ss_pred HHHhcCHH-HHHHH-HHHHHHhhhcccHHHHHHHHHHHHh
Confidence 99999887 44443 4444444455555555555554443
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.9e-08 Score=74.94 Aligned_cols=121 Identities=19% Similarity=0.157 Sum_probs=73.2
Q ss_pred chhhhHhh-HhhhhcCCceeec--CCcc-ccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cCCCE
Q psy12587 5 TARLTITA-TAWGATGPRTTAH--DHCF-KETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EKPDL 79 (390)
Q Consensus 5 ~~~~~~~l-~~L~~~G~~V~~~--~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dv 79 (390)
.+.++.++ ++|.++||+|+++ +... ......++.+..++..... ...+++ .. .. ..+++ .+||+
T Consensus 9 ~~~~~~~~~~~L~~~g~~V~ii~~~~~~~~~~~~~~i~~~~~~~~~k~--------~~~~~~-~~-~l-~k~ik~~~~Dv 77 (139)
T PF13477_consen 9 PSTFIYNLAKELKKRGYDVHIITPRNDYEKYEIIEGIKVIRLPSPRKS--------PLNYIK-YF-RL-RKIIKKEKPDV 77 (139)
T ss_pred cHHHHHHHHHHHHHCCCEEEEEEcCCCchhhhHhCCeEEEEecCCCCc--------cHHHHH-HH-HH-HHHhccCCCCE
Confidence 45678899 9999999999988 2221 2222455666655322111 111222 11 11 23555 99999
Q ss_pred EEEccccc-chh---HHHhhc-ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEcc
Q psy12587 80 VFCDLVSI-CIP---ILQAKQ-FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNS 143 (390)
Q Consensus 80 i~~~~~~~-~~~---~~~~~~-~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s 143 (390)
||+|.... ++. +.+..+ +|+|++.|+.+...... ..+ +.+++.+++++++|.+++.|
T Consensus 78 Ih~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~~~~---~~~----~~~~~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 78 IHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYNSSK---KKK----LKKFIIKFAFKRADKIIVQS 139 (139)
T ss_pred EEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeecCCc---hHH----HHHHHHHHHHHhCCEEEEcC
Confidence 99999654 232 234455 89999999865422211 111 34567788999999999875
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.6e-08 Score=83.81 Aligned_cols=79 Identities=18% Similarity=0.112 Sum_probs=48.8
Q ss_pred cCCCEEEEcccccchhHHHhh----------cccEEEEeecCCccccchhhhh-----h-hh--------cccchhhHHH
Q psy12587 75 EKPDLVFCDLVSICIPILQAK----------QFKVLFYCHYPDQLLSKQGSFL-----K-SI--------YRFPLNKLEE 130 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~~~~----------~~~~v~~~h~~~~~~~~~~~~~-----~-~~--------~~~~~~~~~~ 130 (390)
.+|||||+|+|.+++....++ ++|+++++|+............ . .. ..... .+.+
T Consensus 132 ~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~i-n~lk 210 (245)
T PF08323_consen 132 WKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQI-NFLK 210 (245)
T ss_dssp -S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEE-EHHH
T ss_pred CCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhcccccccccccc-CHHH
Confidence 599999999998877544332 2899999998644322211111 0 00 00111 3456
Q ss_pred HHhcCcceEEEccHhHHHHHHHHh
Q psy12587 131 WTTCKADKIVVNSEFTKSVVQATF 154 (390)
Q Consensus 131 ~~~~~ad~ii~~s~~~~~~~~~~~ 154 (390)
..+..||.|+++|+..++++.+..
T Consensus 211 ~gi~~AD~v~TVS~~Ya~Ei~~~~ 234 (245)
T PF08323_consen 211 AGIVYADKVTTVSPTYAREIQTPE 234 (245)
T ss_dssp HHHHHSSEEEESSHHHHHHTTSHH
T ss_pred HHHHhcCEeeeCCHHHHHHHhCcc
Confidence 788999999999999998887654
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=98.72 E-value=6e-06 Score=68.87 Aligned_cols=284 Identities=14% Similarity=0.124 Sum_probs=156.2
Q ss_pred hhhHhh-HhhhhcCCceeec----CCccccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cCCCEE
Q psy12587 7 RLTITA-TAWGATGPRTTAH----DHCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EKPDLV 80 (390)
Q Consensus 7 ~~~~~l-~~L~~~G~~V~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dvi 80 (390)
++..++ ..|+++||+|.+- +...+-...-++++..+..-...+...+ +..+.. ....+. .++. .+||+.
T Consensus 14 hfFk~lI~elekkG~ev~iT~rd~~~v~~LLd~ygf~~~~Igk~g~~tl~~K---l~~~~e-R~~~L~-ki~~~~kpdv~ 88 (346)
T COG1817 14 HFFKNLIWELEKKGHEVLITCRDFGVVTELLDLYGFPYKSIGKHGGVTLKEK---LLESAE-RVYKLS-KIIAEFKPDVA 88 (346)
T ss_pred hHHHHHHHHHHhCCeEEEEEEeecCcHHHHHHHhCCCeEeecccCCccHHHH---HHHHHH-HHHHHH-HHHhhcCCceE
Confidence 456778 9999999996554 3333344455677777643221111111 111111 111111 3455 999999
Q ss_pred EEcccccchhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHHhccCCCC
Q psy12587 81 FCDLVSICIPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHK 160 (390)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ 160 (390)
+.-............++|.|+...+.... ...+..+..|+.+++++....+.+... |.++.
T Consensus 89 i~~~s~~l~rvafgLg~psIi~~D~ehA~-----------------~qnkl~~Pla~~ii~P~~~~~~~~~~~--G~~p~ 149 (346)
T COG1817 89 IGKHSPELPRVAFGLGIPSIIFVDNEHAE-----------------AQNKLTLPLADVIITPEAIDEEELLDF--GADPN 149 (346)
T ss_pred eecCCcchhhHHhhcCCceEEecCChhHH-----------------HHhhcchhhhhheecccccchHHHHHh--CCCcc
Confidence 87332222233444458888877654331 112445677899999988777776664 32122
Q ss_pred ceeecCCCCC----CCCCCCCCccchhhhcCCCCCCCCeEEEEeecc-----cccCCHHHHHHHHHHHHhhcccccccce
Q psy12587 161 CLDILYPSVY----TEGLEKTTPEPIENVLNPLPGKEDIVFLSINRY-----ERKKNLELAIYSLNSLRSRLSDEMKTHV 231 (390)
Q Consensus 161 ~~~vi~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~-----~~~K~~~~ll~a~~~l~~~~~~~~~~~~ 231 (390)
+ .+-+||+. ...|.+ ....-+.+| +..++.++++=.-.+ ...++.+.+.++++.+.+.
T Consensus 150 ~-i~~~~giae~~~v~~f~p--d~evlkeLg-l~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~--------- 216 (346)
T COG1817 150 K-ISGYNGIAELANVYGFVP--DPEVLKELG-LEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKY--------- 216 (346)
T ss_pred c-eecccceeEEeecccCCC--CHHHHHHcC-CCCCCceEEEeeccccceeeccccchhhHHHHHHHHHhC---------
Confidence 2 23344532 222333 233444444 344345655532221 2245666677777777764
Q ss_pred EEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEE
Q psy12587 232 KLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVI 311 (390)
Q Consensus 232 ~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi 311 (390)
-.+++-.. +..++..+.+ +++...-.. .+-.+++-.|++++-. .|.-.-||...|+|.|
T Consensus 217 giV~ipr~-----------~~~~eife~~---~n~i~pk~~--vD~l~Llyya~lvig~-----ggTMarEaAlLGtpaI 275 (346)
T COG1817 217 GIVLIPRE-----------KEQAEIFEGY---RNIIIPKKA--VDTLSLLYYATLVIGA-----GGTMAREAALLGTPAI 275 (346)
T ss_pred cEEEecCc-----------hhHHHHHhhh---ccccCCccc--ccHHHHHhhhheeecC-----CchHHHHHHHhCCceE
Confidence 24455443 3444444443 223222222 2225688888888842 3555689999999999
Q ss_pred EecCC---CcccceecCcceeeecC-CHHHHHHHHHHHhcCCh
Q psy12587 312 AVNSG---GPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDG 350 (390)
Q Consensus 312 ~~~~~---~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~ 350 (390)
.+..| +..+++. +.|.++.. |+.+..+.+.+.+.++.
T Consensus 276 s~~pGkll~vdk~li--e~G~~~~s~~~~~~~~~a~~~l~~~~ 316 (346)
T COG1817 276 SCYPGKLLAVDKYLI--EKGLLYHSTDEIAIVEYAVRNLKYRR 316 (346)
T ss_pred EecCCccccccHHHH--hcCceeecCCHHHHHHHHHHHhhchh
Confidence 98854 2333332 36788877 88877777777776654
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.63 E-value=5.6e-06 Score=70.30 Aligned_cols=310 Identities=12% Similarity=0.059 Sum_probs=166.4
Q ss_pred cchhhhHhh-Hhhhhc--CCceeec-C-Ccccccc-CCCcceEEeccccccc-cc-------hhhHHHHHHHHHHHHHHH
Q psy12587 4 ATARLTITA-TAWGAT--GPRTTAH-D-HCFKETK-DGTLPVKVIGDWLPRN-IF-------GKFYALCMYLRMIVIALY 69 (390)
Q Consensus 4 G~~~~~~~l-~~L~~~--G~~V~~~-~-~~~~~~~-~~~~~i~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~ 69 (390)
|.-++...+ ++|.+. |.+|.++ + ....... ..++....++...... .. ..........+.+ +.
T Consensus 23 GHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~~~~gVd~V~LPsl~k~~~G~~~~~d~~~~l~e~~~~Rs~l---il 99 (400)
T COG4671 23 GHLRRALRIAHALVEDYLGFDILIISGGPPAGGFPGPAGVDFVKLPSLIKGDNGEYGLVDLDGDLEETKKLRSQL---IL 99 (400)
T ss_pred hHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCCCcccCceEecCceEecCCCceeeeecCCCHHHHHHHHHHH---HH
Confidence 566778888 999998 9999988 2 2222222 2455555554332211 10 1111111222211 11
Q ss_pred HHHhh-cCCCEEEEcccccchhH-----HHhhc---ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEE
Q psy12587 70 VAWYS-EKPDLVFCDLVSICIPI-----LQAKQ---FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIV 140 (390)
Q Consensus 70 ~~~~~-~~~Dvi~~~~~~~~~~~-----~~~~~---~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii 140 (390)
.-++ ++||++++...++++.. +...+ .+.+.-..+.-..... ..+.+.+ .-.+..+-+..|.|+
T Consensus 100 -~t~~~fkPDi~IVd~~P~Glr~EL~ptL~yl~~~~t~~vL~lr~i~D~p~~---~~~~w~~---~~~~~~I~r~yD~V~ 172 (400)
T COG4671 100 -STAETFKPDIFIVDKFPFGLRFELLPTLEYLKTTGTRLVLGLRSIRDIPQE---LEADWRR---AETVRLINRFYDLVL 172 (400)
T ss_pred -HHHHhcCCCEEEEeccccchhhhhhHHHHHHhhcCCcceeehHhhhhchhh---hccchhh---hHHHHHHHHhheEEE
Confidence 2233 99999999997766421 11111 3343333321111100 0011111 122334445679999
Q ss_pred EccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeeccccc-CCHHHHHHHHHHH
Q psy12587 141 VNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERK-KNLELAIYSLNSL 219 (390)
Q Consensus 141 ~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~-K~~~~ll~a~~~l 219 (390)
+..+-.-..+.+.|+..+.-+-.+.+.|+-....+..+.. ... ..+...+++.+|.-... .=++..++|...+
T Consensus 173 v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~~~~~~~p---~~~---~pE~~~Ilvs~GGG~dG~eLi~~~l~A~~~l 246 (400)
T COG4671 173 VYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRSLPHLPLP---PHE---APEGFDILVSVGGGADGAELIETALAAAQLL 246 (400)
T ss_pred EecCccccChhhcCCccHhhhhheeEeEEeeccCcCCCCC---CcC---CCccceEEEecCCChhhHHHHHHHHHHhhhC
Confidence 8887666666666665444456666666431111111100 000 12356677777764322 1122333333333
Q ss_pred HhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCcc
Q psy12587 220 RSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIV 299 (390)
Q Consensus 220 ~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~ 299 (390)
.+-. ..-+++.|...+. ++.+++...-.-.++|.+..+..+- .++++.|+..|.-+ .=++
T Consensus 247 ~~l~------~~~~ivtGP~MP~--------~~r~~l~~~A~~~p~i~I~~f~~~~--~~ll~gA~~vVSm~----GYNT 306 (400)
T COG4671 247 AGLN------HKWLIVTGPFMPE--------AQRQKLLASAPKRPHISIFEFRNDF--ESLLAGARLVVSMG----GYNT 306 (400)
T ss_pred CCCC------cceEEEeCCCCCH--------HHHHHHHHhcccCCCeEEEEhhhhH--HHHHHhhheeeecc----cchh
Confidence 3321 1357788877765 5555555544334789888887655 68999999999643 2258
Q ss_pred HHhhhhcCCCEEEecCCCccc-ce-e------cCcceeeecC--CHHHHHHHHHHHhcCC
Q psy12587 300 PIEAMFCKRPVIAVNSGGPKE-SV-V------DGRTGFLCES--NEEAFAKAMKKIVDND 349 (390)
Q Consensus 300 ~~Ea~a~G~pvi~~~~~~~~e-~i-~------~~~~g~~~~~--~~~~l~~~i~~l~~~~ 349 (390)
++|-+++|||.+.-+....+| .+ . =|-..++.+. +++.++++|..+++.|
T Consensus 307 vCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~P 366 (400)
T COG4671 307 VCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALARP 366 (400)
T ss_pred hhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcccCC
Confidence 899999999998876543333 21 1 1333444554 8999999999998854
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=0.00034 Score=63.66 Aligned_cols=255 Identities=9% Similarity=0.065 Sum_probs=136.0
Q ss_pred cCCCEEEEccccc-----------chhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEcc
Q psy12587 75 EKPDLVFCDLVSI-----------CIPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNS 143 (390)
Q Consensus 75 ~~~Dvi~~~~~~~-----------~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s 143 (390)
.+.|+++.-+... ....+++.++|+++.-++..++.. ...+.+.+++++++|.|.+=-
T Consensus 116 ~~aDlvI~gGG~lfqD~y~~~~~~y~l~A~l~gkpv~l~gqsiGPf~~-----------~~~r~l~r~vl~~~~~ItvRD 184 (426)
T PRK10017 116 SGYDAIIQVGGSFFVDLYGVPQFEHALCAFMAKKPLYMIGHSVGPFQD-----------EQFNQLANYVFGHCDALILRE 184 (426)
T ss_pred HhCCEEEECCCCccccCcccHHHHHHHHHHHcCCCEEEECCcCCCcCC-----------HHHHHHHHHHHhcCCEEEEcc
Confidence 7889998865321 112334555899988887644321 122466678899999999988
Q ss_pred HhHHHHHHHHhccCCCCceeecCCCCCCCCCCCC---CccchhhhcCCCCCCCCeEEEEeeccccc-C--C------HHH
Q psy12587 144 EFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKT---TPEPIENVLNPLPGKEDIVFLSINRYERK-K--N------LEL 211 (390)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~i~~~g~~~~~-K--~------~~~ 211 (390)
+...+.+.+. +++..++.+.+.++-.-..... +.......++ .+...+.+-+.+..+.+. + + ...
T Consensus 185 ~~S~~~Lk~l--Gv~~~~v~~~aDpAF~L~~~~~~~~~~~~~~~~~~-~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~ 261 (426)
T PRK10017 185 SVSLDLMKRS--NITTAKVEHGVDTAWLVDHHTEDFTASYAVQHWLD-VAAQQKTVAITLRELAPFDKRLGTTQQAYEKA 261 (426)
T ss_pred HHHHHHHHHh--CCCccceEEecChhhhCCccccccccchhhhhhhc-ccccCCEEEEEecccccccccccccHHHHHHH
Confidence 8888888776 4534567776643211000000 0000111111 012233333333433311 1 1 134
Q ss_pred HHHHHHHHHhhcccccccceEEEEEcCCCC--C-CcchhHHHHHHHHHHHHcCCCCcEEE-ecCCChHHHHHHHHhcceE
Q psy12587 212 AIYSLNSLRSRLSDEMKTHVKLVVAGGYDP--H-NIENVEYYKELGVLVKKLKLSDNVLF-LTSPSDAAKISLFKFCHCI 287 (390)
Q Consensus 212 ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~--~-~~~~~~y~~~~~~~~~~~~l~~~v~~-~g~~~~~e~~~~~~~adv~ 287 (390)
+.+++..+.+++ .+++++..... . ..++. ...++..+.+.-+.++++ .+..+..|+..++++||++
T Consensus 262 la~~i~~Li~~g-------~~Vv~lp~~~~~~~~~~dD~---~~~~~l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ 331 (426)
T PRK10017 262 FAGVVNRIIDEG-------YQVIALSTCTGIDSYNKDDR---MVALNLRQHVSDPARYHVVMDELNDLEMGKILGACELT 331 (426)
T ss_pred HHHHHHHHHHCC-------CeEEEEecccCccCCCCchH---HHHHHHHHhcccccceeEecCCCChHHHHHHHhhCCEE
Confidence 456666665543 44444443211 0 11111 222334444432333433 4445677889999999999
Q ss_pred EeCCCCCCCCccHHhhhhcCCCEEEecC-CCcccceec-Ccceee--ecC-CHHHHHHHHHHHhcCChhHHHHHHH
Q psy12587 288 IYTPSNEHFGIVPIEAMFCKRPVIAVNS-GGPKESVVD-GRTGFL--CES-NEEAFAKAMKKIVDNDGNIIQQFSQ 358 (390)
Q Consensus 288 v~ps~~e~~~~~~~Ea~a~G~pvi~~~~-~~~~e~i~~-~~~g~~--~~~-~~~~l~~~i~~l~~~~~~~~~~~~~ 358 (390)
|..-. -+++=|++.|+|+|+-.. .-...++.+ +...++ +.. +.+++.+.+.+++++.++.++++.+
T Consensus 332 ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~~~~~l~~~~Li~~v~~~~~~r~~~~~~l~~ 402 (426)
T PRK10017 332 VGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPALNARLAE 402 (426)
T ss_pred EEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEechhhCCHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 85332 245669999999999554 222222221 112232 334 7889999999999998733444433
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=98.59 E-value=0.00016 Score=66.97 Aligned_cols=92 Identities=13% Similarity=0.092 Sum_probs=60.2
Q ss_pred CcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCC----CcccceecC-cceeeec------
Q psy12587 264 DNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSG----GPKESVVDG-RTGFLCE------ 332 (390)
Q Consensus 264 ~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~----~~~e~i~~~-~~g~~~~------ 332 (390)
+++.+.+++++. +++...++..+-+ .+..++++||+++|+|+|+.+.. .....+.+. +.|+-+.
T Consensus 323 ~~~~v~~w~pQ~---~iL~h~~v~~fvt--HgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~ 397 (459)
T PLN02448 323 DMGLVVPWCDQL---KVLCHSSVGGFWT--HCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEE 397 (459)
T ss_pred CCEEEeccCCHH---HHhccCccceEEe--cCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccC
Confidence 467778999987 4777777633222 23456899999999999996642 233333331 3455442
Q ss_pred -C-CHHHHHHHHHHHhcCC-hhHHHHHHHHHH
Q psy12587 333 -S-NEEAFAKAMKKIVDND-GNIIQQFSQFGF 361 (390)
Q Consensus 333 -~-~~~~l~~~i~~l~~~~-~~~~~~~~~~~~ 361 (390)
. +.+++++++.+++.++ + .-+++++++.
T Consensus 398 ~~~~~~~l~~av~~vl~~~~~-~~~~~r~~a~ 428 (459)
T PLN02448 398 TLVGREEIAELVKRFMDLESE-EGKEMRRRAK 428 (459)
T ss_pred CcCcHHHHHHHHHHHhcCCch-hHHHHHHHHH
Confidence 3 7899999999999875 3 3444444443
|
|
| >KOG3742|consensus | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.2e-06 Score=72.89 Aligned_cols=251 Identities=18% Similarity=0.199 Sum_probs=145.6
Q ss_pred hHHHHHhcCcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCC---------ccchhhhcCC-------CC
Q psy12587 127 KLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTT---------PEPIENVLNP-------LP 190 (390)
Q Consensus 127 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~---------~~~~~~~~~~-------l~ 190 (390)
-+|+-+...|+...++|+-++-....... .++-.+.|||.+...|.... ++.+.+..++ +.
T Consensus 244 C~ERaa~h~AhVFTTVSeITa~EAeHlLk---RKPD~itPNGLNV~KFsA~HEFQNLHA~~KekIndFVRGHF~GhlDFd 320 (692)
T KOG3742|consen 244 CLERAAAHTAHVFTTVSEITALEAEHLLK---RKPDVITPNGLNVKKFSAVHEFQNLHAQKKEKINDFVRGHFHGHLDFD 320 (692)
T ss_pred HHHHHhhhhhhhhhhHHHHHHHHHHHHHh---cCCCeeCCCCcceeehhHHHHHHHHHHHHHHHHHHHhhhhcccccccc
Confidence 45677777888888999877766655544 45677889999988776532 1222221111 22
Q ss_pred CCCCeEEEEeeccc-ccCCHHHHHHHHHHHHhhcccc--cccceEEEEEcCCCCC----CcchhHHHHHHHHHHHH----
Q psy12587 191 GKEDIVFLSINRYE-RKKNLELAIYSLNSLRSRLSDE--MKTHVKLVVAGGYDPH----NIENVEYYKELGVLVKK---- 259 (390)
Q Consensus 191 ~~~~~~i~~~g~~~-~~K~~~~ll~a~~~l~~~~~~~--~~~~~~l~i~G~~~~~----~~~~~~y~~~~~~~~~~---- 259 (390)
-++...+..+||.+ .+||-|.+|+++++|.-...-. ...-+.|.|....... ...++...+++...+.+
T Consensus 321 LdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVesLkgqAv~kqL~dtv~~Vk~~ 400 (692)
T KOG3742|consen 321 LDKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVESLKGQAVRKQLWDTVNEVKEK 400 (692)
T ss_pred ccceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhhhccHHHHHHHHHHHHHHHHH
Confidence 34567788889987 6999999999999875432210 0011234444322211 11111111221111110
Q ss_pred --------------------------------------cCCC-----------------------------Cc--EEEec
Q psy12587 260 --------------------------------------LKLS-----------------------------DN--VLFLT 270 (390)
Q Consensus 260 --------------------------------------~~l~-----------------------------~~--v~~~g 270 (390)
-.++ ++ |.|++
T Consensus 401 ~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa~DpiL~~iRr~~LFN~~~DRVKvifHP 480 (692)
T KOG3742|consen 401 VGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDANDPILSSIRRIGLFNSPSDRVKVIFHP 480 (692)
T ss_pred HHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccccchHHHHhHhhhcccCcccceEEEecH
Confidence 0111 12 23332
Q ss_pred C-CC------hHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccce----ecC-cceeee-cC----
Q psy12587 271 S-PS------DAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESV----VDG-RTGFLC-ES---- 333 (390)
Q Consensus 271 ~-~~------~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i----~~~-~~g~~~-~~---- 333 (390)
. ++ .-+..++.+.|++.|+||.+|++|.+..|+--+|+|-|+|+..|..-++ .+. ..|+.+ +-
T Consensus 481 EFLss~sPllglDYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks 560 (692)
T KOG3742|consen 481 EFLSSTSPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKS 560 (692)
T ss_pred HHhccCCCCcCCCHHHHhccccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCC
Confidence 1 11 1234578899999999999999999999999999999999997765444 332 245443 21
Q ss_pred ---CHHHHHHHHHHHhcCChhHHHHHH-HHHHHHHhhhcCHHHHHHHHHHHHH
Q psy12587 334 ---NEEAFAKAMKKIVDNDGNIIQQFS-QFGFNRFNEKFSFQAFSIQLNTIVN 382 (390)
Q Consensus 334 ---~~~~l~~~i~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
+.+++++-+........ |+++. +|--+....-.+|..+...|.+.=.
T Consensus 561 ~deSv~qL~~~m~~F~~qsR--RQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~ 611 (692)
T KOG3742|consen 561 PDESVQQLASFMYEFCKQSR--RQRIIQRNRTERLSDLLDWKYLGRYYRKARH 611 (692)
T ss_pred hhhHHHHHHHHHHHHHHHHH--HHHHHHhcchhhHHHHHhHHHHhHHHHHHHH
Confidence 44555555555554333 44433 3334455567788888777765433
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=5e-06 Score=77.58 Aligned_cols=110 Identities=12% Similarity=0.054 Sum_probs=74.7
Q ss_pred CCCcEEEecCCChHHHHHHH--HhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCC----CcccceecCcceeeecC--
Q psy12587 262 LSDNVLFLTSPSDAAKISLF--KFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSG----GPKESVVDGRTGFLCES-- 333 (390)
Q Consensus 262 l~~~v~~~g~~~~~e~~~~~--~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~----~~~e~i~~~~~g~~~~~-- 333 (390)
+++||.+.+++|.. +++ .+++++|. -|...++.||+.+|+|+|+-+.. .....+...+.|..++.
T Consensus 344 ~p~Nv~i~~w~Pq~---~lL~hp~v~~fIt----HGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~ 416 (507)
T PHA03392 344 LPANVLTQKWFPQR---AVLKHKNVKAFVT----QGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVT 416 (507)
T ss_pred CCCceEEecCCCHH---HHhcCCCCCEEEe----cCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCC
Confidence 47899999999987 577 45888884 33456899999999999997652 23333445556777653
Q ss_pred -CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHH
Q psy12587 334 -NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNT 379 (390)
Q Consensus 334 -~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
+.+++.++|.++++++. .+++..+-+.....+..+....+-.+.+
T Consensus 417 ~t~~~l~~ai~~vl~~~~-y~~~a~~ls~~~~~~p~~~~~~av~~iE 462 (507)
T PHA03392 417 VSAAQLVLAIVDVIENPK-YRKNLKELRHLIRHQPMTPLHKAIWYTE 462 (507)
T ss_pred cCHHHHHHHHHHHhCCHH-HHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 88999999999999877 5555544444433233334443334443
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=7.2e-06 Score=72.19 Aligned_cols=179 Identities=14% Similarity=0.145 Sum_probs=107.4
Q ss_pred cCCCEEEEcc-cccchhHHHhhc-----ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHH
Q psy12587 75 EKPDLVFCDL-VSICIPILQAKQ-----FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKS 148 (390)
Q Consensus 75 ~~~Dvi~~~~-~~~~~~~~~~~~-----~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~ 148 (390)
.+||+++.-+ +.+.+.+++..+ +|+++++- |..|.+.... .+.+.+.+|.+.+.-++..+
T Consensus 75 ~~pd~~i~iD~p~Fnl~lak~~k~~~~~i~viyyi~-PqvWAWr~~R-------------~~~i~k~~d~vl~ifPFE~~ 140 (347)
T PRK14089 75 KQADKVLLMDSSSFNIPLAKKIKKAYPKKEIIYYIL-PQVWAWKKGR-------------AKILEKYCDFLASILPFEVQ 140 (347)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEEC-ccceeeCcch-------------HHHHHHHHhhhhccCCCCHH
Confidence 8999998755 666666555433 77766553 4444433221 13334567777776665554
Q ss_pred HHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccc--cCCHHHHHHHHHHHHhhcccc
Q psy12587 149 VVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYER--KKNLELAIYSLNSLRSRLSDE 226 (390)
Q Consensus 149 ~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~--~K~~~~ll~a~~~l~~~~~~~ 226 (390)
.+ + .+..++.|++-.. +.... ..+ +. ++.+.++.|+-.. .+.+..+++++.++.++
T Consensus 141 ~y----g----~~~~~VGhPl~d~-~~~~~-----~~~---~~-~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~---- 198 (347)
T PRK14089 141 FY----Q----SKATYVGHPLLDE-IKEFK-----KDL---DK-EGTIAFMPGSRKSEIKRLMPIFKELAKKLEGK---- 198 (347)
T ss_pred Hh----C----CCCEEECCcHHHh-hhhhh-----hhc---CC-CCEEEEECCCCHHHHHHHHHHHHHHHHHHhhc----
Confidence 44 2 3567888885332 11110 001 22 3566677776432 34556677888888764
Q ss_pred cccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhc
Q psy12587 227 MKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFC 306 (390)
Q Consensus 227 ~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~ 306 (390)
...+++.+.... +.+++...+. ..+.+.+ +..++|+.||+.+..| |++.+|++.+
T Consensus 199 ---~~~~~i~~a~~~---------~~i~~~~~~~---~~~~~~~-----~~~~~m~~aDlal~~S-----GT~TLE~al~ 253 (347)
T PRK14089 199 ---EKILVVPSFFKG---------KDLKEIYGDI---SEFEISY-----DTHKALLEAEFAFICS-----GTATLEAALI 253 (347)
T ss_pred ---CcEEEEeCCCcH---------HHHHHHHhcC---CCcEEec-----cHHHHHHhhhHHHhcC-----cHHHHHHHHh
Confidence 256777765421 4455544332 2344443 2368999999999866 8888899999
Q ss_pred CCCEEEec
Q psy12587 307 KRPVIAVN 314 (390)
Q Consensus 307 G~pvi~~~ 314 (390)
|+|.|..-
T Consensus 254 g~P~Vv~Y 261 (347)
T PRK14089 254 GTPFVLAY 261 (347)
T ss_pred CCCEEEEE
Confidence 99998844
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=98.50 E-value=9.8e-06 Score=73.23 Aligned_cols=271 Identities=15% Similarity=0.121 Sum_probs=125.5
Q ss_pred cCCCEEEEcccccc-hhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHH
Q psy12587 75 EKPDLVFCDLVSIC-IPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQAT 153 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~-~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 153 (390)
.+.+++++...... .......+.++|..+|+. +.-.......... .............|.+++.|+...+.+.+.
T Consensus 77 ~~Ak~~i~~~~~~~~~~~~~~~~~~~i~lwHG~-~~K~~g~~~~~~~---~~~~~~~~~~~~~d~~~~~s~~~~~~~~~~ 152 (369)
T PF04464_consen 77 ARAKYIISDSYFPDLIYFKKRKNQKYIQLWHGI-PLKKIGYDSPDNK---NYRKNYKRNYRNYDYFIVSSEFEKEIFKKA 152 (369)
T ss_dssp HHEEEEEESS---T--TS---TTSEEEE--SS---SB--GGG-S------TS-HHHHHHHTT-SEEEESSHHHHHHHHHH
T ss_pred HhCcEEEECCCCCcccccccCCCcEEEEecCCC-cccccchhccccc---cchhhhhhhccCCcEEEECCHHHHHHHHHH
Confidence 45678887753222 223333448999999986 2211000000000 000123445778899999999999999998
Q ss_pred hccCCCCceeecCCCCCCCCCCCCCc--cchhhhcCCCCCCCCeEEEEeecccccCCH------HH--HHHHHHHHHhhc
Q psy12587 154 FRSLDHKCLDILYPSVYTEGLEKTTP--EPIENVLNPLPGKEDIVFLSINRYERKKNL------EL--AIYSLNSLRSRL 223 (390)
Q Consensus 154 ~~~~~~~~~~vi~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~------~~--ll~a~~~l~~~~ 223 (390)
++.. .+++.+.+.+=....+..... ..+.+.++ ...++.+|+|+-+++..... .. -++.+..+.+.
T Consensus 153 f~~~-~~~i~~~G~PR~D~l~~~~~~~~~~i~~~~~--~~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~- 228 (369)
T PF04464_consen 153 FGYP-EDKILVTGYPRNDYLFNKSKENRNRIKKKLG--IDKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKN- 228 (369)
T ss_dssp TT---GGGEEES--GGGHHHHHSTT-HHHHHHHHTT----SS-EEEEEE----GGG--GGSS----TT-HHHHHHHHTT-
T ss_pred hccC-cceEEEeCCCeEhHHhccCHHHHHHHHHHhc--cCCCCcEEEEeeccccccccccccccccccCHHHHHHHhCC-
Confidence 7632 445555544422222222221 23344443 22356688998776544332 11 22333322222
Q ss_pred ccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHH-cCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHh
Q psy12587 224 SDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKK-LKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIE 302 (390)
Q Consensus 224 ~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~-~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~E 302 (390)
++.+++-.. +........ ....++|.+...- .++.+++..||++|.- ++.+++|
T Consensus 229 ------~~~li~k~H------------p~~~~~~~~~~~~~~~i~~~~~~--~~~~~ll~~aDiLITD-----ySSi~fD 283 (369)
T PF04464_consen 229 ------NYVLIIKPH------------PNMKKKFKDFKEDNSNIIFVSDN--EDIYDLLAAADILITD-----YSSIIFD 283 (369)
T ss_dssp ------TEEEEE--S------------HHHHTT----TT-TTTEEE-TT---S-HHHHHHT-SEEEES-----S-THHHH
T ss_pred ------CcEEEEEeC------------chhhhchhhhhccCCcEEECCCC--CCHHHHHHhcCEEEEe-----chhHHHH
Confidence 477776552 222222222 2234677765433 3668999999999953 4678999
Q ss_pred hhhcCCCEEEe--cCCCc---ccc---eecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHH
Q psy12587 303 AMFCKRPVIAV--NSGGP---KES---VVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFS 374 (390)
Q Consensus 303 a~a~G~pvi~~--~~~~~---~e~---i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (390)
++.+++|||.. |.... +.+ ..+...|..+. +.++|.++|..+++++. ...+..+...+.. -.|.-....
T Consensus 284 ~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~~-~~~eL~~~i~~~~~~~~-~~~~~~~~~~~~~-~~~~Dg~s~ 360 (369)
T PF04464_consen 284 FLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIVY-NFEELIEAIENIIENPD-EYKEKREKFRDKF-FKYNDGNSS 360 (369)
T ss_dssp HGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EES-SHHHHHHHHTTHHHHHH-HTHHHHHHHHHHH-STT--S-HH
T ss_pred HHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCceeC-CHHHHHHHHHhhhhCCH-HHHHHHHHHHHHh-CCCCCchHH
Confidence 99999999963 33211 111 22334566676 89999999999887766 4333333333333 123333455
Q ss_pred HHHHHHH
Q psy12587 375 IQLNTIV 381 (390)
Q Consensus 375 ~~~~~~~ 381 (390)
+++.+.+
T Consensus 361 eri~~~I 367 (369)
T PF04464_consen 361 ERIVNYI 367 (369)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555443
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=98.48 E-value=0.001 Score=61.08 Aligned_cols=231 Identities=10% Similarity=-0.029 Sum_probs=119.7
Q ss_pred HhcCcceEEEccHhHHH-HHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHH
Q psy12587 132 TTCKADKIVVNSEFTKS-VVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLE 210 (390)
Q Consensus 132 ~~~~ad~ii~~s~~~~~-~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~ 210 (390)
.+..+|.|++.|=...+ .+.+.+......++..|.+-.....-.........+.++. ...+..+++..|+... -..+
T Consensus 190 ~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~wLd~-~~~~sVvyvSfGS~~~-l~~~ 267 (442)
T PLN02208 190 GLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPDTSKPLEEQWSHFLSG-FPPKSVVFCSLGSQII-LEKD 267 (442)
T ss_pred hhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcCCCCCCHHHHHHHHhc-CCCCcEEEEecccccc-CCHH
Confidence 46689999998854443 2333332110124554444321111001112334444431 1124677778888753 2445
Q ss_pred HHHHHHHHH-HhhcccccccceEEEEEcC-CCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEE
Q psy12587 211 LAIYSLNSL-RSRLSDEMKTHVKLVVAGG-YDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCII 288 (390)
Q Consensus 211 ~ll~a~~~l-~~~~~~~~~~~~~l~i~G~-~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v 288 (390)
.+.+.+..+ ....| +.+++--. +.... ....-+.+.+..+. .++.+.+++|+. ++++...+..
T Consensus 268 q~~e~~~~l~~s~~p------f~wv~r~~~~~~~~--~~~lp~~f~~r~~~----~g~~v~~W~PQ~---~iL~H~~v~~ 332 (442)
T PLN02208 268 QFQELCLGMELTGLP------FLIAVKPPRGSSTV--QEGLPEGFEERVKG----RGVVWGGWVQQP---LILDHPSIGC 332 (442)
T ss_pred HHHHHHHHHHhCCCc------EEEEEeCCCcccch--hhhCCHHHHHHHhc----CCcEeeccCCHH---HHhcCCccCe
Confidence 566666654 33333 44444311 11000 00011334444432 567788999998 4788887655
Q ss_pred eCCCCCCCCccHHhhhhcCCCEEEecCC----Ccccceec-Ccceeeec-----C-CHHHHHHHHHHHhcCChhHHHHHH
Q psy12587 289 YTPSNEHFGIVPIEAMFCKRPVIAVNSG----GPKESVVD-GRTGFLCE-----S-NEEAFAKAMKKIVDNDGNIIQQFS 357 (390)
Q Consensus 289 ~ps~~e~~~~~~~Ea~a~G~pvi~~~~~----~~~e~i~~-~~~g~~~~-----~-~~~~l~~~i~~l~~~~~~~~~~~~ 357 (390)
+-++ +.-++++||+++|+|+|+.+.- ....++.+ -+.|+.+. . +.+++.++|.++++++.+..++++
T Consensus 333 FvtH--cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r 410 (442)
T PLN02208 333 FVNH--CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVR 410 (442)
T ss_pred EEcc--CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHH
Confidence 4443 3345899999999999996642 22233222 34565553 1 778999999999987632455555
Q ss_pred HHHHH---HHhhhcCHHHHHHHHHHHH
Q psy12587 358 QFGFN---RFNEKFSFQAFSIQLNTIV 381 (390)
Q Consensus 358 ~~~~~---~~~~~~~~~~~~~~~~~~~ 381 (390)
+++++ .+.+.=|.....+++.+-+
T Consensus 411 ~~~~~~~~~~~~~gsS~~~l~~~v~~l 437 (442)
T PLN02208 411 SNHTKLKEILVSPGLLTGYVDKFVEEL 437 (442)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 55543 3323334444444444443
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.8e-05 Score=61.58 Aligned_cols=96 Identities=14% Similarity=0.104 Sum_probs=60.7
Q ss_pred cCCCEEEEcccc-cchhHHHhh-cccEEEEeec------CCccccc--hhhhhhhhcccchhhHHHHHhcCcceEEEccH
Q psy12587 75 EKPDLVFCDLVS-ICIPILQAK-QFKVLFYCHY------PDQLLSK--QGSFLKSIYRFPLNKLEEWTTCKADKIVVNSE 144 (390)
Q Consensus 75 ~~~Dvi~~~~~~-~~~~~~~~~-~~~~v~~~h~------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~ 144 (390)
+.||||++|..+ ..+.+.-.. ..|++.++-. .+..+.. ..........++.+......+..||..+++|.
T Consensus 65 f~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E~~y~~~g~d~~FDpe~p~~~~~~~~~r~rN~~~l~~l~~~D~~isPT~ 144 (171)
T PF12000_consen 65 FVPDVIIAHPGWGETLFLKDVFPDAPLIGYFEFYYRASGADVGFDPEFPPSLDDRARLRMRNAHNLLALEQADAGISPTR 144 (171)
T ss_pred CCCCEEEEcCCcchhhhHHHhCCCCcEEEEEEEEecCCCCcCCCCCCCCCCHHHHHHHHHHhHHHHHHHHhCCcCcCCCH
Confidence 899999999944 344444444 3787766542 1111100 11111122222223344556888999999999
Q ss_pred hHHHHHHHHhccCCCCceeecCCCCCCCCC
Q psy12587 145 FTKSVVQATFRSLDHKCLDILYPSVYTEGL 174 (390)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~ 174 (390)
+.++.+-..+. +++.||+-|||++.+
T Consensus 145 wQ~~~fP~~~r----~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 145 WQRSQFPAEFR----SKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHhCCHHHH----cCcEEeecccchhhc
Confidence 99998888765 799999999998764
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.24 E-value=6.9e-05 Score=71.03 Aligned_cols=143 Identities=16% Similarity=0.184 Sum_probs=105.8
Q ss_pred CCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCC
Q psy12587 193 EDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSP 272 (390)
Q Consensus 193 ~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~ 272 (390)
+.+.++++-|+..+|.....+.-+..+.....+...+.+.+++.|...+...........+...++..+...+|.|+...
T Consensus 486 ~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~nY 565 (750)
T COG0058 486 NALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPNY 565 (750)
T ss_pred CcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCCC
Confidence 56788999999999988776544443333221000124777888887776555555666666666665545678888776
Q ss_pred ChHHHHHHHHhcceEEeCCC--CCCCCccHHhhhhcCCCEEEecCCCccccee--cCcceeeecCCH
Q psy12587 273 SDAAKISLFKFCHCIIYTPS--NEHFGIVPIEAMFCKRPVIAVNSGGPKESVV--DGRTGFLCESNE 335 (390)
Q Consensus 273 ~~~e~~~~~~~adv~v~ps~--~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~--~~~~g~~~~~~~ 335 (390)
+-.-...++..||+-...|. .|..|++-+-++.-|.+-|+|--|...|+.+ .+.||+++-.+.
T Consensus 566 dvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~~ 632 (750)
T COG0058 566 DVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGETV 632 (750)
T ss_pred ChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCch
Confidence 55555678999999988776 6999999999999999999999999999986 788999997633
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.13 E-value=7.1e-05 Score=61.77 Aligned_cols=134 Identities=18% Similarity=0.218 Sum_probs=80.2
Q ss_pred EEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEE-EcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCCh
Q psy12587 196 VFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVV-AGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSD 274 (390)
Q Consensus 196 ~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i-~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~ 274 (390)
+++..|.-++. ...++.++.+.+.. +.++| +|++.+. .+.+.+.++++ +++.++-. .
T Consensus 161 ilI~lGGsDpk---~lt~kvl~~L~~~~-------~nl~iV~gs~~p~-------l~~l~k~~~~~---~~i~~~~~--~ 218 (318)
T COG3980 161 ILITLGGSDPK---NLTLKVLAELEQKN-------VNLHIVVGSSNPT-------LKNLRKRAEKY---PNINLYID--T 218 (318)
T ss_pred EEEEccCCChh---hhHHHHHHHhhccC-------eeEEEEecCCCcc-------hhHHHHHHhhC---CCeeeEec--c
Confidence 45556654432 24567777776653 34433 4544332 26677777665 67777644 4
Q ss_pred HHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEE----ecCCCcccceec----CcceeeecCCHHHHHHHHHHHh
Q psy12587 275 AAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIA----VNSGGPKESVVD----GRTGFLCESNEEAFAKAMKKIV 346 (390)
Q Consensus 275 ~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~----~~~~~~~e~i~~----~~~g~~~~~~~~~l~~~i~~l~ 346 (390)
.++..+|++||+.+... |.++.||+..|+|.++ .+.......+.. ...|+-. ..+.....+.++.
T Consensus 219 ~dma~LMke~d~aI~Aa-----GstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~l--~~~~~~~~~~~i~ 291 (318)
T COG3980 219 NDMAELMKEADLAISAA-----GSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYHL--KDLAKDYEILQIQ 291 (318)
T ss_pred hhHHHHHHhcchheecc-----chHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCCC--chHHHHHHHHHhh
Confidence 45689999999998643 7899999999999433 222222221111 1122222 4566777788888
Q ss_pred cCChhHHHHHHHH
Q psy12587 347 DNDGNIIQQFSQF 359 (390)
Q Consensus 347 ~~~~~~~~~~~~~ 359 (390)
+|+. .+..+...
T Consensus 292 ~d~~-~rk~l~~~ 303 (318)
T COG3980 292 KDYA-RRKNLSFG 303 (318)
T ss_pred hCHH-Hhhhhhhc
Confidence 8888 66666543
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.011 Score=55.24 Aligned_cols=82 Identities=12% Similarity=0.117 Sum_probs=54.9
Q ss_pred CCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCC----Ccccceec-Ccceeee------
Q psy12587 263 SDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSG----GPKESVVD-GRTGFLC------ 331 (390)
Q Consensus 263 ~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~----~~~e~i~~-~~~g~~~------ 331 (390)
+.++.+.+++|+. .+++.+++..+-++ +.-++++||+++|+|+|+.+.. .....+.+ -..|+-+
T Consensus 344 ~~g~~v~~w~PQ~---~iL~h~~v~~fvtH--~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~ 418 (482)
T PLN03007 344 GKGLIIRGWAPQV---LILDHQATGGFVTH--CGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLV 418 (482)
T ss_pred cCCEEEecCCCHH---HHhccCccceeeec--CcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEecccccc
Confidence 3678889999987 58888876333232 3346899999999999996642 22222211 1122221
Q ss_pred ----cC-CHHHHHHHHHHHhcCC
Q psy12587 332 ----ES-NEEAFAKAMKKIVDND 349 (390)
Q Consensus 332 ----~~-~~~~l~~~i~~l~~~~ 349 (390)
.. +.+++.+++++++.++
T Consensus 419 ~~~~~~~~~~~l~~av~~~m~~~ 441 (482)
T PLN03007 419 KVKGDFISREKVEKAVREVIVGE 441 (482)
T ss_pred ccccCcccHHHHHHHHHHHhcCc
Confidence 23 8899999999999876
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.6e-07 Score=74.42 Aligned_cols=89 Identities=15% Similarity=0.226 Sum_probs=59.9
Q ss_pred CcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCc--------ccceecCcceeeecC--
Q psy12587 264 DNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGP--------KESVVDGRTGFLCES-- 333 (390)
Q Consensus 264 ~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~--------~e~i~~~~~g~~~~~-- 333 (390)
.+|.+.++.++. .++|+.||++|.-+ .+.++.|++++|+|.|.-+.... ...+.+...+..+..
T Consensus 55 ~~v~~~~~~~~m--~~~m~~aDlvIs~a----G~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~ 128 (167)
T PF04101_consen 55 PNVKVFGFVDNM--AELMAAADLVISHA----GAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESE 128 (167)
T ss_dssp CCCEEECSSSSH--HHHHHHHSEEEECS-----CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC
T ss_pred CcEEEEechhhH--HHHHHHcCEEEeCC----CccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCccc
Confidence 679999998754 79999999999633 35689999999999988766551 222333334444433
Q ss_pred -CHHHHHHHHHHHhcCChhHHHHHHHH
Q psy12587 334 -NEEAFAKAMKKIVDNDGNIIQQFSQF 359 (390)
Q Consensus 334 -~~~~l~~~i~~l~~~~~~~~~~~~~~ 359 (390)
+++++.++|..+++++. ....+.++
T Consensus 129 ~~~~~L~~~i~~l~~~~~-~~~~~~~~ 154 (167)
T PF04101_consen 129 LNPEELAEAIEELLSDPE-KLKEMAKA 154 (167)
T ss_dssp -SCCCHHHHHHCHCCCHH--SHHHCCC
T ss_pred CCHHHHHHHHHHHHcCcH-HHHHHHHH
Confidence 57889999999998887 55555444
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00075 Score=55.62 Aligned_cols=295 Identities=11% Similarity=0.040 Sum_probs=137.0
Q ss_pred cchhhhHhh-HhhhhcCCceeec---CCccccccC---CCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhhcC
Q psy12587 4 ATARLTITA-TAWGATGPRTTAH---DHCFKETKD---GTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYSEK 76 (390)
Q Consensus 4 G~~~~~~~l-~~L~~~G~~V~~~---~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (390)
|+.+...++ ..+.+.||+++++ ...+..... ..+.+..+ . ...+...++.. ..
T Consensus 2 GVTr~a~e~~~wf~KNg~~~~i~~a~e~sftR~dsH~~~~~si~k~---~-------~~e~de~v~~v----------N~ 61 (355)
T PF11440_consen 2 GVTRNALEMRDWFDKNGVEFTIVSADEKSFTRPDSHDSKSFSIPKY---L-------AKEYDETVKKV----------ND 61 (355)
T ss_dssp HHHHHHHHHHHHHHHTT-EEEEEEETSS--TTTTSSS-TTTEEEE----T-------TTHHHHHHHHH----------TS
T ss_pred CccccHHHHHHHHHhcCCeeEEEEecccccCCccccccceeeeehh---h-------HHHHHHHHHHh----------hc
Confidence 788999999 9999999999887 222211111 11122211 0 01111222211 89
Q ss_pred CCEEEEcccccchh-------HHHhh-c----ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccH
Q psy12587 77 PDLVFCDLVSICIP-------ILQAK-Q----FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSE 144 (390)
Q Consensus 77 ~Dvi~~~~~~~~~~-------~~~~~-~----~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~ 144 (390)
+|++.+.+.++.-. .-+.. + +++|...|+..... ..+.. . ..-+++.+|.|.+.|.
T Consensus 62 yDI~m~nSvPa~~vqE~~iNnY~kii~~Ik~~ik~V~~~Hdh~~ls------I~rn~-----~-le~~m~~~DvIfshs~ 129 (355)
T PF11440_consen 62 YDIVMFNSVPATKVQEAIINNYEKIIKKIKPSIKVVGFMHDHNKLS------IDRNP-----Y-LEGTMNEMDVIFSHSD 129 (355)
T ss_dssp SSEEEEEE--BTTS-HHHHHHHHHHHHCS-TTSEEEEEE---SHHH------HTTBS-----S-HHHHHHH-SEEEES-T
T ss_pred cCEEEEecccCchHHHHHHHHHHHHHHhccccceeEEEeeccceee------ccccc-----c-HHHHHHhhcEEEeccc
Confidence 99999988543210 11111 1 56788888643211 11110 1 1334778999999875
Q ss_pred h---HHHHHHHHhccC--CCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEE---EEeecccccCCHHHHHHHH
Q psy12587 145 F---TKSVVQATFRSL--DHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVF---LSINRYERKKNLELAIYSL 216 (390)
Q Consensus 145 ~---~~~~~~~~~~~~--~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i---~~~g~~~~~K~~~~ll~a~ 216 (390)
. .......++|.. ..+++.-.|...+.+.. .+-...+..+. .+...+.. .|+||...+||+..+++..
T Consensus 130 ~g~f~kv~m~~l~Ps~~~l~~~i~~~p~v~nfqpp--~~i~~~Rstyw--kd~se~nmnv~~yigR~Tt~kG~~~mfD~h 205 (355)
T PF11440_consen 130 NGWFSKVLMKELLPSKVSLFDRIKKFPMVFNFQPP--MDINKYRSTYW--KDVSEKNMNVNRYIGRQTTWKGPRRMFDLH 205 (355)
T ss_dssp TSHHHHTHHHHHS-SS--SSS-------EEE------B-HHHHHHHH-----GGGSEEEEEEEE--SSGGG-HHHHHHHH
T ss_pred cchHHHHHHHhhccccCchhhhhhhcceeeecCCc--ccHHHHHHHHh--hhhHhhhcccceeeeeeeeecCcHHHhhhH
Confidence 3 222233454421 12334444433222111 11112222221 22233444 7999999999999999999
Q ss_pred HHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHH-------------HcCC--CCcEEEecCCChHHHHHHH
Q psy12587 217 NSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVK-------------KLKL--SDNVLFLTSPSDAAKISLF 281 (390)
Q Consensus 217 ~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~-------------~~~l--~~~v~~~g~~~~~e~~~~~ 281 (390)
....+. + +++-++-|-.... ..+.-.-+ +..+ ...+.++|..-++|+.+.|
T Consensus 206 ~~~lK~-~-----~~~t~~~GierS~--------A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~~~Yi~~E~~~~M 271 (355)
T PF11440_consen 206 EKILKP-A-----GFKTIMEGIERSP--------AKISIKDHGIPYEYYPKLDCDEPKPAPNSPVPVYGPYIRSEGLERM 271 (355)
T ss_dssp HHTTTT-T-----T-EEEEE---SST--------HHHHHHHTT--EEEE-CTGGGG---SSS--EEEESS--HHHHHHHH
T ss_pred HHhcCC-c-----chhHHhhhhhcCC--------ceeeeecCCcccccCccccccCcccCCCCcceecchhhhHHHHHHH
Confidence 887665 4 3788887744332 21111100 1111 2347788888888999999
Q ss_pred HhcceEEeCCC------CCCCCccHHhhhhcCCCEEE-ecCCCc-------ccceecCcceeeecC-CHHHHHHHHHHHh
Q psy12587 282 KFCHCIIYTPS------NEHFGIVPIEAMFCKRPVIA-VNSGGP-------KESVVDGRTGFLCES-NEEAFAKAMKKIV 346 (390)
Q Consensus 282 ~~adv~v~ps~------~e~~~~~~~Ea~a~G~pvi~-~~~~~~-------~e~i~~~~~g~~~~~-~~~~l~~~i~~l~ 346 (390)
+.+-.....+. .+..-.+-+|..|||+-.|- ...|.. ..++......+.++. |.++-.+.|.++.
T Consensus 272 aks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~~I~~De~dle~T~ekl~E~a 351 (355)
T PF11440_consen 272 AKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYSAIYFDENDLESTVEKLIEVA 351 (355)
T ss_dssp HTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S-EEE-TTSHHHHHHHHHHHH
T ss_pred hhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcceeEeccchHHHHHHHHHHHh
Confidence 99877765544 23455678999999965555 333322 233433334455666 8888887777775
Q ss_pred cC
Q psy12587 347 DN 348 (390)
Q Consensus 347 ~~ 348 (390)
++
T Consensus 352 ~~ 353 (355)
T PF11440_consen 352 NN 353 (355)
T ss_dssp T-
T ss_pred cc
Confidence 54
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >KOG1050|consensus | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.0056 Score=59.10 Aligned_cols=295 Identities=13% Similarity=0.141 Sum_probs=173.8
Q ss_pred HHhh--cCCCEEEEcccccchhH--HHhh--cccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccH
Q psy12587 71 AWYS--EKPDLVFCDLVSICIPI--LQAK--QFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSE 144 (390)
Q Consensus 71 ~~~~--~~~Dvi~~~~~~~~~~~--~~~~--~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~ 144 (390)
.+++ ..-|+|++|..+..+.. .+-. +.++-+..|.+.+......... .+.-.-..+-.+|.+-..+.
T Consensus 133 ~ive~~~~~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfpssEi~r~lp-------~r~eIl~gll~~~~i~f~t~ 205 (732)
T KOG1050|consen 133 KIVEVYEEGDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPSSEIYRCLP-------VRKEILRGLLYDDLLGFHTD 205 (732)
T ss_pred HHHHhccCCCcEEEEcchhhccchhhhcccccceEEEeccCCCChHHHHHhcc-------cHHHHHHhhhccCccccccc
Confidence 4555 78899999997644422 2222 2555577776544222111100 00111122334555544444
Q ss_pred hHHHHHHHH------------hcc--C----CCCceeecCCCCCCCCCCCCCccc----hhhhcCCCCCCCCeEEEEeec
Q psy12587 145 FTKSVVQAT------------FRS--L----DHKCLDILYPSVYTEGLEKTTPEP----IENVLNPLPGKEDIVFLSINR 202 (390)
Q Consensus 145 ~~~~~~~~~------------~~~--~----~~~~~~vi~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~i~~~g~ 202 (390)
..+..+... ++. + +...+..+|-|++...+....... -...++ -+..++.+++.+-+
T Consensus 206 d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~-~~~~g~klilgvD~ 284 (732)
T KOG1050|consen 206 DYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLELPYVGSKGMEIK-EPFKGKKLILGVDR 284 (732)
T ss_pred cHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccchhHHHHHHHHh-hhccCCceEecccc
Confidence 333333321 000 0 012456677788877665432210 111111 02246778888889
Q ss_pred ccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHH---HHHHHHHHHHc----C---CCCcEEEecCC
Q psy12587 203 YERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEY---YKELGVLVKKL----K---LSDNVLFLTSP 272 (390)
Q Consensus 203 ~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y---~~~~~~~~~~~----~---l~~~v~~~g~~ 272 (390)
+...||...=+.++.++.+++|+ ....+.++.+...... ++.+| ...+...+.+. + -.+-+.+...+
T Consensus 285 ~d~~kg~~~Kl~a~e~~L~~~pe-~~~kVvliqi~~~~~~--~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~ 361 (732)
T KOG1050|consen 285 LDSIKGIQLKLLAFEQFLEEYPE-WIDKVVLIQIENPKRT--DGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDL 361 (732)
T ss_pred cccccCchHHHHHHHHHHHhChh-hhceEEEEEEecCCcc--cchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccC
Confidence 99999999999999999888885 3345566555543322 12121 12222222211 1 12233456778
Q ss_pred ChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcC----CCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhc
Q psy12587 273 SDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCK----RPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVD 347 (390)
Q Consensus 273 ~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G----~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~ 347 (390)
+..++.++++-+|+++..+..+|..++.+|+..|. .+.|.+...|..+.+++ ...++.+ +.++++.+|..+++
T Consensus 362 ~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d--~aivvnpw~~~~~~~~i~~al~ 439 (732)
T KOG1050|consen 362 PFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLED--AAIVVNPWDGDEFAILISKALT 439 (732)
T ss_pred CHHHHhhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEeeeccccccccc--cCEEECCcchHHHHHHHHHHhh
Confidence 99999999999999999999999999999999873 77888888787777644 3467888 99999999999999
Q ss_pred CChhHHHHHHHHHHHHHhhhcCHHHHHHHHHH
Q psy12587 348 NDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNT 379 (390)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
.+++.++..-...+..+ ..++...++..+..
T Consensus 440 ~s~~e~~~r~~~~~~~v-~~~~~~~W~~~~~~ 470 (732)
T KOG1050|consen 440 MSDEERELREPKHYKYV-STHDVVYWAKSFLQ 470 (732)
T ss_pred cCHHHHhhcchhhhhhh-cchhHHHHHHHHHH
Confidence 98833433333334443 44555555555554
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.024 Score=52.54 Aligned_cols=81 Identities=14% Similarity=0.110 Sum_probs=55.3
Q ss_pred CcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCC----Ccccceec-Ccceeeec------
Q psy12587 264 DNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSG----GPKESVVD-GRTGFLCE------ 332 (390)
Q Consensus 264 ~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~----~~~e~i~~-~~~g~~~~------ 332 (390)
++..+.+++|+. ++++.+++..+-++ +.-++++||+++|+|+|+.+.. .....+.+ -+.|+.+.
T Consensus 324 ~~g~v~~w~PQ~---~iL~h~~vg~FitH--~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~ 398 (456)
T PLN02210 324 GQGVVLEWSPQE---KILSHMAISCFVTH--CGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDG 398 (456)
T ss_pred CCeEEEecCCHH---HHhcCcCcCeEEee--CCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCC
Confidence 344567999988 47888874333232 2335899999999999996642 22333333 35666652
Q ss_pred C-CHHHHHHHHHHHhcCC
Q psy12587 333 S-NEEAFAKAMKKIVDND 349 (390)
Q Consensus 333 ~-~~~~l~~~i~~l~~~~ 349 (390)
. +.+++++++++++.++
T Consensus 399 ~~~~~~l~~av~~~m~~~ 416 (456)
T PLN02210 399 ELKVEEVERCIEAVTEGP 416 (456)
T ss_pred cCCHHHHHHHHHHHhcCc
Confidence 3 7899999999999764
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.007 Score=49.74 Aligned_cols=193 Identities=13% Similarity=0.081 Sum_probs=104.9
Q ss_pred cCCCEEEEcccccchhHHHhhc---ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHH
Q psy12587 75 EKPDLVFCDLVSICIPILQAKQ---FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQ 151 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~~~~~---~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 151 (390)
..||+++..+..+......+++ .+.++.+.+|..- .+..|.|+++-....+...
T Consensus 69 ~~Pdl~I~aGrrta~l~~~lkk~~~~~~vVqI~~Prlp-----------------------~~~fDlvivp~HD~~~~~s 125 (329)
T COG3660 69 QRPDLIITAGRRTAPLAFYLKKKFGGIKVVQIQDPRLP-----------------------YNHFDLVIVPYHDWREELS 125 (329)
T ss_pred CCCceEEecccchhHHHHHHHHhcCCceEEEeeCCCCC-----------------------cccceEEeccchhhhhhhh
Confidence 6699999988655554444433 4555555554221 2235888888776665533
Q ss_pred HHhccCCCCceee---cCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCH--H---HHHHHHHHHHhhc
Q psy12587 152 ATFRSLDHKCLDI---LYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNL--E---LAIYSLNSLRSRL 223 (390)
Q Consensus 152 ~~~~~~~~~~~~v---i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~--~---~ll~a~~~l~~~~ 223 (390)
.. ..++.- .+|.|....... ..+..+..+ |....++-+++|.-.+.-.+ + .+..++.+..++.
T Consensus 126 ~~-----~~Nilpi~Gs~h~Vt~~~lAa-~~e~~~~~~---p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~ 196 (329)
T COG3660 126 DQ-----GPNILPINGSPHNVTSQRLAA-LREAFKHLL---PLPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQ 196 (329)
T ss_pred cc-----CCceeeccCCCCcccHHHhhh-hHHHHHhhC---CCCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhC
Confidence 21 123322 233343332221 112222222 55567788888876544333 2 2333333333321
Q ss_pred ccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHH-cCCCCcEEEecC-CChHHHHHHHHhcceEEeCCCCCCCCccHH
Q psy12587 224 SDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKK-LKLSDNVLFLTS-PSDAAKISLFKFCHCIIYTPSNEHFGIVPI 301 (390)
Q Consensus 224 ~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~-~~l~~~v~~~g~-~~~~e~~~~~~~adv~v~ps~~e~~~~~~~ 301 (390)
...|.+.-+-... +.+++.++. +.-...+.+-+. ....-..++|+.||.++.+...- .-..
T Consensus 197 ------g~~~lisfSRRTp--------~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~TaDSi---nM~s 259 (329)
T COG3660 197 ------GGSFLISFSRRTP--------DTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADYIISTADSI---NMCS 259 (329)
T ss_pred ------CceEEEEeecCCc--------HHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcceEEEecchh---hhhH
Confidence 2555554443332 677777766 443455555443 12223468999999999765421 2357
Q ss_pred hhhhcCCCEEEecCC
Q psy12587 302 EAMFCKRPVIAVNSG 316 (390)
Q Consensus 302 Ea~a~G~pvi~~~~~ 316 (390)
||.+.|+||-+-...
T Consensus 260 EAasTgkPv~~~~~~ 274 (329)
T COG3660 260 EAASTGKPVFILEPP 274 (329)
T ss_pred HHhccCCCeEEEecC
Confidence 999999999885433
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0041 Score=57.26 Aligned_cols=213 Identities=8% Similarity=-0.040 Sum_probs=112.7
Q ss_pred hcCcceEEEccHhHHH-HHHHHhccCCCCceeecCCCCCCCCCC--CCCccchhhhcCCCCCCCCeEEEEeecccccCCH
Q psy12587 133 TCKADKIVVNSEFTKS-VVQATFRSLDHKCLDILYPSVYTEGLE--KTTPEPIENVLNPLPGKEDIVFLSINRYERKKNL 209 (390)
Q Consensus 133 ~~~ad~ii~~s~~~~~-~~~~~~~~~~~~~~~vi~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~ 209 (390)
...|+.|++.|=...+ .+.+.+......++.-|.+-+....-. .......-+.++.-+ .+..+.+.+|+.... ..
T Consensus 190 ~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~WLD~q~-~~sVvyvsfGS~~~~-~~ 267 (446)
T PLN00414 190 LKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQNKSGKPLEDRWNHWLNGFE-PGSVVFCAFGTQFFF-EK 267 (446)
T ss_pred hccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCcccccCcccHHHHHHHHhcCC-CCceEEEeecccccC-CH
Confidence 5678999998844433 233333211012455554433211100 001122334554223 255677778876533 33
Q ss_pred HHHHHHHHHHHhhcccccccceEEEEEcC-CCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEE
Q psy12587 210 ELAIYSLNSLRSRLSDEMKTHVKLVVAGG-YDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCII 288 (390)
Q Consensus 210 ~~ll~a~~~l~~~~~~~~~~~~~l~i~G~-~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v 288 (390)
+.+.+.+..|...+. ++-.++... +... . ....-+.+++.++. ....+.+++|+. .+++.+.+..
T Consensus 268 ~q~~e~a~gL~~s~~-----~Flwvvr~~~~~~~-~-~~~lp~~f~~r~~~----~g~vv~~w~PQ~---~vL~h~~v~~ 333 (446)
T PLN00414 268 DQFQEFCLGMELTGL-----PFLIAVMPPKGSST-V-QEALPEGFEERVKG----RGIVWEGWVEQP---LILSHPSVGC 333 (446)
T ss_pred HHHHHHHHHHHHcCC-----CeEEEEecCCCccc-c-hhhCChhHHHHhcC----CCeEEeccCCHH---HHhcCCccce
Confidence 556666665544432 233333321 1100 0 00111445555543 345667999998 4787775432
Q ss_pred eCCCCCCCCccHHhhhhcCCCEEEecCC----Ccccce-ecCcceeeec-----C-CHHHHHHHHHHHhcCChhHHHHHH
Q psy12587 289 YTPSNEHFGIVPIEAMFCKRPVIAVNSG----GPKESV-VDGRTGFLCE-----S-NEEAFAKAMKKIVDNDGNIIQQFS 357 (390)
Q Consensus 289 ~ps~~e~~~~~~~Ea~a~G~pvi~~~~~----~~~e~i-~~~~~g~~~~-----~-~~~~l~~~i~~l~~~~~~~~~~~~ 357 (390)
+-++ +.-++++||+++|+|+|+.+.. ....++ +.-+.|+.+. . +.+++.+++++++.++.+..++++
T Consensus 334 fvtH--~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r 411 (446)
T PLN00414 334 FVNH--CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVK 411 (446)
T ss_pred EEec--CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHH
Confidence 2222 3346899999999999996642 233344 2335566652 3 889999999999987532556666
Q ss_pred HHHHHH
Q psy12587 358 QFGFNR 363 (390)
Q Consensus 358 ~~~~~~ 363 (390)
+++++.
T Consensus 412 ~~a~~~ 417 (446)
T PLN00414 412 RNHKKL 417 (446)
T ss_pred HHHHHH
Confidence 665544
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00072 Score=62.41 Aligned_cols=116 Identities=10% Similarity=0.037 Sum_probs=76.5
Q ss_pred cEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecC----CCcccceecCcceeeec------C-
Q psy12587 265 NVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS----GGPKESVVDGRTGFLCE------S- 333 (390)
Q Consensus 265 ~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~----~~~~e~i~~~~~g~~~~------~- 333 (390)
.+.+.+++|+. ++++...+..+-++ +.-++++||+++|+|+|+.+. ......+...+.|+.+. .
T Consensus 340 G~vv~~W~PQ~---~IL~H~~v~~FvtH--cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~ 414 (472)
T PLN02670 340 GMIHVGWVPQV---KILSHESVGGFLTH--CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSF 414 (472)
T ss_pred CeEEeCcCCHH---HHhcCcccceeeec--CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcC
Confidence 36778999987 57877777443332 344689999999999999664 22333444455676663 2
Q ss_pred CHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhh
Q psy12587 334 NEEAFAKAMKKIVDNDG-NIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNML 385 (390)
Q Consensus 334 ~~~~l~~~i~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
+.+++.++|.+++.+++ +.+++-.+..++.+.++=+.+..++.+++.+.+..
T Consensus 415 ~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 415 TSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRENR 467 (472)
T ss_pred cHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHhc
Confidence 68999999999997752 02222223333444455667777787777776655
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.0067 Score=56.00 Aligned_cols=82 Identities=11% Similarity=0.032 Sum_probs=56.6
Q ss_pred CCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCC----CcccceecC-cceeeecC--CH
Q psy12587 263 SDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSG----GPKESVVDG-RTGFLCES--NE 335 (390)
Q Consensus 263 ~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~----~~~e~i~~~-~~g~~~~~--~~ 335 (390)
.++..+.+++|+.+ ++...++..+-++ +.-++++||+++|+|+|+.+.. .....+.+. +.|+.+.. +.
T Consensus 323 ~~~g~v~~w~PQ~~---iL~h~~v~~fvtH--~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~ 397 (451)
T PLN02410 323 SGRGYIVKWAPQKE---VLSHPAVGGFWSH--CGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDR 397 (451)
T ss_pred cCCeEEEccCCHHH---HhCCCccCeeeec--CchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCcccH
Confidence 35667779999984 7777666332222 2345899999999999996642 223333332 46766633 89
Q ss_pred HHHHHHHHHHhcCC
Q psy12587 336 EAFAKAMKKIVDND 349 (390)
Q Consensus 336 ~~l~~~i~~l~~~~ 349 (390)
+++++++.+++.++
T Consensus 398 ~~v~~av~~lm~~~ 411 (451)
T PLN02410 398 GAVERAVKRLMVEE 411 (451)
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999999775
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.0059 Score=56.09 Aligned_cols=238 Identities=8% Similarity=-0.010 Sum_probs=123.1
Q ss_pred hcCcceEEEccHhHHH-HHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHH
Q psy12587 133 TCKADKIVVNSEFTKS-VVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLEL 211 (390)
Q Consensus 133 ~~~ad~ii~~s~~~~~-~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ 211 (390)
++.++.|++.|=...+ .+.+.+......++..|.+-+....-........-+.++.-+ .+..+++.+|+... -..+.
T Consensus 197 ~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~~~~~~~~~cl~WLD~q~-~~sVvyvsfGS~~~-~~~~q 274 (453)
T PLN02764 197 LMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPDKTRELEERWVKWLSGYE-PDSVVFCALGSQVI-LEKDQ 274 (453)
T ss_pred hccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCccccccchhHHHHHHhCCC-CCceEEEeeccccc-CCHHH
Confidence 5678899988743333 233333211013455555432111000001123334443122 35577788888743 23355
Q ss_pred HHHHHHHHHhhcccccccceEEEEEcC-CCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeC
Q psy12587 212 AIYSLNSLRSRLSDEMKTHVKLVVAGG-YDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYT 290 (390)
Q Consensus 212 ll~a~~~l~~~~~~~~~~~~~l~i~G~-~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~p 290 (390)
+.+.+..|..... ++..++-.. +... . ....-+.++...+. ..+.+.+++|+.+ +++...+..+-
T Consensus 275 ~~ela~gL~~s~~-----pflwv~r~~~~~~~-~-~~~lp~~f~~r~~g----rG~v~~~W~PQ~~---vL~h~~v~~Fv 340 (453)
T PLN02764 275 FQELCLGMELTGS-----PFLVAVKPPRGSST-I-QEALPEGFEERVKG----RGVVWGGWVQQPL---ILSHPSVGCFV 340 (453)
T ss_pred HHHHHHHHHhCCC-----CeEEEEeCCCCCcc-h-hhhCCcchHhhhcc----CCcEEeCCCCHHH---HhcCcccCeEE
Confidence 5555555544433 244444311 1100 0 00011233333332 3467779999984 77776553322
Q ss_pred CCCCCCCccHHhhhhcCCCEEEecCC----Cccccee-cCcceeeec-----C-CHHHHHHHHHHHhcCChhHHHHHHHH
Q psy12587 291 PSNEHFGIVPIEAMFCKRPVIAVNSG----GPKESVV-DGRTGFLCE-----S-NEEAFAKAMKKIVDNDGNIIQQFSQF 359 (390)
Q Consensus 291 s~~e~~~~~~~Ea~a~G~pvi~~~~~----~~~e~i~-~~~~g~~~~-----~-~~~~l~~~i~~l~~~~~~~~~~~~~~ 359 (390)
++ +.-++++||+++|+|+|+.+.. .....+. .-+.|+.+. . +.+++.++++++++++.+..++++++
T Consensus 341 tH--~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~ 418 (453)
T PLN02764 341 SH--CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKN 418 (453)
T ss_pred ec--CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHH
Confidence 32 3456899999999999997652 2233342 223455431 3 88999999999998752145555555
Q ss_pred HH---HHHhhhcCHHHHHHHHHHHHHhhhhhc
Q psy12587 360 GF---NRFNEKFSFQAFSIQLNTIVNNMLDKK 388 (390)
Q Consensus 360 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (390)
++ +.+.+.=|.....+++.+.+.+..++.
T Consensus 419 a~~~~~~~~~~GSS~~~l~~lv~~~~~~~~~~ 450 (453)
T PLN02764 419 HTKWRETLASPGLLTGYVDNFIESLQDLVSGT 450 (453)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhcccc
Confidence 44 344333345556666666666655443
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00076 Score=65.05 Aligned_cols=148 Identities=13% Similarity=0.098 Sum_probs=109.1
Q ss_pred CCeEEEEeecccccCCHHH-HHHH---HHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHH----HcCCCC
Q psy12587 193 EDIVFLSINRYERKKNLEL-AIYS---LNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVK----KLKLSD 264 (390)
Q Consensus 193 ~~~~i~~~g~~~~~K~~~~-ll~a---~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~----~~~l~~ 264 (390)
+.+.++++-|+..+|...+ ++.. +.++++. |+.......+++.|...+.........+.+...++ .-.+.+
T Consensus 542 ~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~-p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 542 KALFDVQIKRIHEYKRQLMNVLHVITRYNRIKAD-PDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred ccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhC-CCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcC
Confidence 5678899999999999888 5554 5555543 21011238899999887765555555555555555 112234
Q ss_pred --cEEEecCCChHHHHHHHHhcceEEeCCC--CCCCCccHHhhhhcCCCEEEecCCCcccceec--CcceeeecCCHHHH
Q psy12587 265 --NVLFLTSPSDAAKISLFKFCHCIIYTPS--NEHFGIVPIEAMFCKRPVIAVNSGGPKESVVD--GRTGFLCESNEEAF 338 (390)
Q Consensus 265 --~v~~~g~~~~~e~~~~~~~adv~v~ps~--~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~--~~~g~~~~~~~~~l 338 (390)
+|.|+...+-.-...++..||+....|. .|..|++=+-+|.-|.+.+++--|...|+.++ ++||+++-.+.+++
T Consensus 621 ~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG~~~~ev 700 (815)
T PRK14986 621 KLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNTAEEV 700 (815)
T ss_pred ceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeCCCHHHH
Confidence 6888877655555689999999998777 69999999999999999999999999999876 78999997666666
Q ss_pred HHH
Q psy12587 339 AKA 341 (390)
Q Consensus 339 ~~~ 341 (390)
.+.
T Consensus 701 ~~~ 703 (815)
T PRK14986 701 EAL 703 (815)
T ss_pred HHH
Confidence 554
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00024 Score=67.17 Aligned_cols=158 Identities=14% Similarity=0.178 Sum_probs=81.0
Q ss_pred CCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecC
Q psy12587 192 KEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTS 271 (390)
Q Consensus 192 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~ 271 (390)
++..+++..|+... ...+..++++.+..++.|. +++..-.+... .. +++|+.+..+
T Consensus 275 ~~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~~~------~~iW~~~~~~~--------~~---------l~~n~~~~~W 330 (500)
T PF00201_consen 275 KKGVVYVSFGSIVS-SMPEEKLKEIAEAFENLPQ------RFIWKYEGEPP--------EN---------LPKNVLIVKW 330 (500)
T ss_dssp TTEEEEEE-TSSST-T-HHHHHHHHHHHHHCSTT------EEEEEETCSHG--------CH---------HHTTEEEESS
T ss_pred CCCEEEEecCcccc-hhHHHHHHHHHHHHhhCCC------ccccccccccc--------cc---------ccceEEEecc
Confidence 45677888888753 2344445555554445442 33333322211 11 2478899999
Q ss_pred CChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecC-C---CcccceecCcceeeecC---CHHHHHHHHHH
Q psy12587 272 PSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS-G---GPKESVVDGRTGFLCES---NEEAFAKAMKK 344 (390)
Q Consensus 272 ~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~-~---~~~e~i~~~~~g~~~~~---~~~~l~~~i~~ 344 (390)
+|+. ++++...+-++-+. |.-+++.||+.+|+|+|+-+. + .....+.+.+.|..++. +.+++.++|.+
T Consensus 331 ~PQ~---~lL~hp~v~~fitH--gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ 405 (500)
T PF00201_consen 331 LPQN---DLLAHPRVKLFITH--GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRAAIRE 405 (500)
T ss_dssp --HH---HHHTSTTEEEEEES----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHHHHHH
T ss_pred ccch---hhhhcccceeeeec--cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHHHHHHHHH
Confidence 9987 57876655333232 334589999999999999765 2 23334445556777653 88999999999
Q ss_pred HhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHH
Q psy12587 345 IVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNT 379 (390)
Q Consensus 345 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
+++|+. ..++..+-+...-.+..++...+-.|.|
T Consensus 406 vl~~~~-y~~~a~~ls~~~~~~p~~p~~~~~~~ie 439 (500)
T PF00201_consen 406 VLENPS-YKENAKRLSSLFRDRPISPLERAVWWIE 439 (500)
T ss_dssp HHHSHH-HHHHHHHHHHTTT---------------
T ss_pred HHhhhH-HHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 999876 5544443332222223444444444444
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0049 Score=56.95 Aligned_cols=88 Identities=13% Similarity=0.181 Sum_probs=61.7
Q ss_pred CCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecC----CCcccceec-CcceeeecC-CHH
Q psy12587 263 SDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS----GGPKESVVD-GRTGFLCES-NEE 336 (390)
Q Consensus 263 ~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~----~~~~e~i~~-~~~g~~~~~-~~~ 336 (390)
++++.+.+++|+. .+++..++..+-++ +.-++++||+.+|+|+|+.+. ......+.+ -+.|+-+.. +.+
T Consensus 327 ~~~~~v~~w~PQ~---~iL~h~~v~~fvtH--~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 401 (448)
T PLN02562 327 SKQGKVVSWAPQL---EVLKHQAVGCYLTH--CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQK 401 (448)
T ss_pred ccCEEEEecCCHH---HHhCCCccceEEec--CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHH
Confidence 3678888999988 57877775333332 334689999999999999664 233334433 245666666 899
Q ss_pred HHHHHHHHHhcCChhHHHHH
Q psy12587 337 AFAKAMKKIVDNDGNIIQQF 356 (390)
Q Consensus 337 ~l~~~i~~l~~~~~~~~~~~ 356 (390)
++++++.+++.+++ .+++.
T Consensus 402 ~l~~~v~~~l~~~~-~r~~a 420 (448)
T PLN02562 402 EVEEGLRKVMEDSG-MGERL 420 (448)
T ss_pred HHHHHHHHHhCCHH-HHHHH
Confidence 99999999998766 44443
|
|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.014 Score=55.88 Aligned_cols=207 Identities=15% Similarity=0.141 Sum_probs=120.1
Q ss_pred HHHhcCcceEEEccHhHHHHHHHH----hccCCCCceeecCCCCCCCCCCCCCc-------------------cch----
Q psy12587 130 EWTTCKADKIVVNSEFTKSVVQAT----FRSLDHKCLDILYPSVYTEGLEKTTP-------------------EPI---- 182 (390)
Q Consensus 130 ~~~~~~ad~ii~~s~~~~~~~~~~----~~~~~~~~~~vi~~~~~~~~~~~~~~-------------------~~~---- 182 (390)
..++..+..+-.+|.-..+.+++. |..+.++++.-+-|||.+..+-.... ..+
T Consensus 326 ~LAl~~S~~vNGVS~LH~ev~k~~~f~~f~~l~P~kf~nvTNGVh~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~ 405 (713)
T PF00343_consen 326 NLALRGSHSVNGVSKLHGEVLKQMVFKDFYELWPEKFGNVTNGVHPRRWLSQANPELSELITEYIGDDWRTDLEQLEKLE 405 (713)
T ss_dssp HHHHHCESEEEESSHHHHHHHHHTTTHHHHHHSGGGEEE----B-TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGG
T ss_pred HHHHHhcccccchHHHHHHHHHHHHhhhhhhcCCceeeccccCccCcccccccCHHHHHHHHHHhccccccCHHHHHHHH
Confidence 445777888889998877766542 22233678999999998766532100 000
Q ss_pred ---------------------------hhhcCC-CCCCCCeEEEEeecccccCCHHH-H---HHHHHHHHhhcccccccc
Q psy12587 183 ---------------------------ENVLNP-LPGKEDIVFLSINRYERKKNLEL-A---IYSLNSLRSRLSDEMKTH 230 (390)
Q Consensus 183 ---------------------------~~~~~~-l~~~~~~~i~~~g~~~~~K~~~~-l---l~a~~~l~~~~~~~~~~~ 230 (390)
.+..+. +. .+.+..+++-|+..+|...+ + +.-+.++++.. ......
T Consensus 406 ~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ld-p~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p-~~~~~P 483 (713)
T PF00343_consen 406 KFADDEEFQEELREVKQENKERLAEYIKKRTGVELD-PDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNP-NKKIRP 483 (713)
T ss_dssp GGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS----TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHST-TSCCS-
T ss_pred HhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC-cchhhhhhhhhcccccccCcccccHHHHHHHHHhcc-cCCCCC
Confidence 000010 22 25677899999999999887 3 34555555431 111124
Q ss_pred eEEEEEcCCCCCCcchhHHHHHHHHHHHH----cCCCC--cEEEecCCChHHHHHHHHhcceEEeCCC--CCCCCccHHh
Q psy12587 231 VKLVVAGGYDPHNIENVEYYKELGVLVKK----LKLSD--NVLFLTSPSDAAKISLFKFCHCIIYTPS--NEHFGIVPIE 302 (390)
Q Consensus 231 ~~l~i~G~~~~~~~~~~~y~~~~~~~~~~----~~l~~--~v~~~g~~~~~e~~~~~~~adv~v~ps~--~e~~~~~~~E 302 (390)
+.+++.|...+....++...+.+.+.++. -.+.+ +|.|+...+-.-...++..+|+-+..|+ .|..|++-+-
T Consensus 484 v~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK 563 (713)
T PF00343_consen 484 VQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMK 563 (713)
T ss_dssp EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHH
T ss_pred eEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcch
Confidence 88999998877644444444444444432 12333 6888887766666789999999999876 6999999999
Q ss_pred hhhcCCCEEEecCCCcccceec--CcceeeecCCHHHH
Q psy12587 303 AMFCKRPVIAVNSGGPKESVVD--GRTGFLCESNEEAF 338 (390)
Q Consensus 303 a~a~G~pvi~~~~~~~~e~i~~--~~~g~~~~~~~~~l 338 (390)
+|.-|.+.+++--|...|+.+. .+|.+++-.+.+++
T Consensus 564 ~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG~~~~ev 601 (713)
T PF00343_consen 564 AAMNGALNLSTLDGWNIEIAEAVGEENIFIFGLTAEEV 601 (713)
T ss_dssp HHHTT-EEEEESSTCHHHHHHHH-GGGSEEES-BHHHH
T ss_pred hhcCCCeEEecccchhHHHHHhcCCCcEEEcCCCHHHH
Confidence 9999999999998998888753 34677774455554
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >KOG4626|consensus | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0058 Score=56.41 Aligned_cols=182 Identities=13% Similarity=0.193 Sum_probs=123.8
Q ss_pred CCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCC-CcEE
Q psy12587 189 LPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLS-DNVL 267 (390)
Q Consensus 189 l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~-~~v~ 267 (390)
+|+ +.+++..+..+ .|--...++.+..+.++.|+ -.|++.-...... ..++..++++|++ ++|.
T Consensus 755 Lp~-d~vvf~~FNqL--yKidP~~l~~W~~ILk~VPn-----S~LwllrfPa~ge-------~rf~ty~~~~Gl~p~rii 819 (966)
T KOG4626|consen 755 LPE-DAVVFCNFNQL--YKIDPSTLQMWANILKRVPN-----SVLWLLRFPAVGE-------QRFRTYAEQLGLEPDRII 819 (966)
T ss_pred CCC-CeEEEeechhh--hcCCHHHHHHHHHHHHhCCc-----ceeEEEeccccch-------HHHHHHHHHhCCCcccee
Confidence 344 66665555544 45556789999999998885 5565544221110 7889999999984 6788
Q ss_pred EecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCccc-----ceecCcceeeecCCHHHHHHHH
Q psy12587 268 FLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKE-----SVVDGRTGFLCESNEEAFAKAM 342 (390)
Q Consensus 268 ~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e-----~i~~~~~g~~~~~~~~~l~~~i 342 (390)
|..-...+|-..-.+.+|+++-+....| -.+-+|.+.+|+|+|+-+...... .+..-+.|-++..+.++..+.-
T Consensus 820 fs~va~k~eHvrr~~LaDv~LDTplcnG-hTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak~~eEY~~ia 898 (966)
T KOG4626|consen 820 FSPVAAKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAKNREEYVQIA 898 (966)
T ss_pred eccccchHHHHHhhhhhhhcccCcCcCC-cccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhhhHHHHHHHH
Confidence 8777777777788889999987665443 345688999999999966432211 1111123333333888999998
Q ss_pred HHHhcCChhHHHHHHHHHHHHH--hhhcCHHHHHHHHHHHHHhhhhh
Q psy12587 343 KKIVDNDGNIIQQFSQFGFNRF--NEKFSFQAFSIQLNTIVNNMLDK 387 (390)
Q Consensus 343 ~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 387 (390)
.++-.|.+ ..+.++..-+..- .--|+-..++..+++.|.++.++
T Consensus 899 V~Latd~~-~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~ 944 (966)
T KOG4626|consen 899 VRLATDKE-YLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKK 944 (966)
T ss_pred HHhhcCHH-HHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHH
Confidence 99988888 7777776554432 23578888888888888877654
|
|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0024 Score=61.82 Aligned_cols=148 Identities=14% Similarity=0.134 Sum_probs=106.9
Q ss_pred CCeEEEEeecccccCCHHH-H---HHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHc----CCCC
Q psy12587 193 EDIVFLSINRYERKKNLEL-A---IYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKL----KLSD 264 (390)
Q Consensus 193 ~~~~i~~~g~~~~~K~~~~-l---l~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~----~l~~ 264 (390)
+.+..+++-|+..+|...+ + ++.+.++++. |+.......+++.|...+...........+...++.. .+.+
T Consensus 529 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~-p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~ 607 (797)
T cd04300 529 DSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKEN-PNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGD 607 (797)
T ss_pred CccEEEEeeechhhhhhhhHHHhhHHHHHHHHhC-CCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCC
Confidence 6678899999999999888 4 4445566554 2111123789999987776444444444555554421 1233
Q ss_pred --cEEEecCCChHHHHHHHHhcceEEeCCC--CCCCCccHHhhhhcCCCEEEecCCCcccceec--CcceeeecCCHHHH
Q psy12587 265 --NVLFLTSPSDAAKISLFKFCHCIIYTPS--NEHFGIVPIEAMFCKRPVIAVNSGGPKESVVD--GRTGFLCESNEEAF 338 (390)
Q Consensus 265 --~v~~~g~~~~~e~~~~~~~adv~v~ps~--~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~--~~~g~~~~~~~~~l 338 (390)
+|.|+....-.-...++..||+-...|. .|..|++=+-+|.-|.+.++|--|...|+.++ ++|++++-.+.+++
T Consensus 608 ~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ev 687 (797)
T cd04300 608 KLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAEEV 687 (797)
T ss_pred ceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEEeCCCHHHH
Confidence 6888776555444689999999988777 69999999999999999999999999998876 77999997666666
Q ss_pred HHH
Q psy12587 339 AKA 341 (390)
Q Consensus 339 ~~~ 341 (390)
.+.
T Consensus 688 ~~~ 690 (797)
T cd04300 688 EAL 690 (797)
T ss_pred HHH
Confidence 544
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.03 Score=51.88 Aligned_cols=193 Identities=13% Similarity=0.069 Sum_probs=98.6
Q ss_pred hcCcceEEEccHhHHHH-HHHHhcc-CCCCceeecCCCCCCC--CCCC---CCccchhhhcCCCCCCCCeEEEEeecccc
Q psy12587 133 TCKADKIVVNSEFTKSV-VQATFRS-LDHKCLDILYPSVYTE--GLEK---TTPEPIENVLNPLPGKEDIVFLSINRYER 205 (390)
Q Consensus 133 ~~~ad~ii~~s~~~~~~-~~~~~~~-~~~~~~~vi~~~~~~~--~~~~---~~~~~~~~~~~~l~~~~~~~i~~~g~~~~ 205 (390)
.+++|.++++|-...+. ..+.+.. ....++..|.+-.... .... .......+.++.-+ .+..+.+..|+...
T Consensus 209 ~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~-~~sVVyvSfGS~~~ 287 (468)
T PLN02207 209 FTKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQP-EASVVFLCFGSMGR 287 (468)
T ss_pred cccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCcccccCCCCccccchhhHHHHHHhcCC-CCcEEEEEeccCcC
Confidence 57799999999777665 3333321 0012344443322111 0000 01123444443112 24577777787642
Q ss_pred --cCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHh
Q psy12587 206 --KKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKF 283 (390)
Q Consensus 206 --~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ 283 (390)
.+.+..+..++..... ++ +..+....... ....-+.+.+.. .++..+.+++|+.+ +++.
T Consensus 288 ~~~~q~~ela~~l~~~~~--------~f-lW~~r~~~~~~--~~~lp~~f~er~-----~~~g~i~~W~PQ~~---IL~H 348 (468)
T PLN02207 288 LRGPLVKEIAHGLELCQY--------RF-LWSLRTEEVTN--DDLLPEGFLDRV-----SGRGMICGWSPQVE---ILAH 348 (468)
T ss_pred CCHHHHHHHHHHHHHCCC--------cE-EEEEeCCCccc--cccCCHHHHhhc-----CCCeEEEEeCCHHH---Hhcc
Confidence 2234445555554422 13 33333211100 000002222222 35667779999984 6777
Q ss_pred cceEEeCCCCCCCCccHHhhhhcCCCEEEecCC----Ccccceec-Ccceeee---------cC-CHHHHHHHHHHHhc
Q psy12587 284 CHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSG----GPKESVVD-GRTGFLC---------ES-NEEAFAKAMKKIVD 347 (390)
Q Consensus 284 adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~----~~~e~i~~-~~~g~~~---------~~-~~~~l~~~i~~l~~ 347 (390)
..+..+-++ +.-++++||+++|+|+|+.+.. ....++.+ -+.|+-+ .. +.+++.++|.+++.
T Consensus 349 ~~vg~FvTH--~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 349 KAVGGFVSH--CGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMN 425 (468)
T ss_pred cccceeeec--CccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHh
Confidence 666333232 2345899999999999996642 22332222 3345422 13 78999999999996
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.011 Score=51.47 Aligned_cols=191 Identities=15% Similarity=0.071 Sum_probs=105.3
Q ss_pred cCCCEEEEcccccchhHHHhhc---c-cEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHH
Q psy12587 75 EKPDLVFCDLVSICIPILQAKQ---F-KVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVV 150 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~~~~~---~-~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 150 (390)
..||+|++.+..+......+++ . ...+++.+|... .+..|.+|++.+.-.
T Consensus 56 ~~pdLiIsaGr~t~~~~~~l~r~~gg~~~~V~i~~P~~~-----------------------~~~FDlvi~p~HD~~--- 109 (311)
T PF06258_consen 56 PWPDLIISAGRRTAPAALALRRASGGRTKTVQIMDPRLP-----------------------PRPFDLVIVPEHDRL--- 109 (311)
T ss_pred CCCcEEEECCCchHHHHHHHHHHcCCCceEEEEcCCCCC-----------------------ccccCEEEECcccCc---
Confidence 6799999998665554444433 2 244445544221 235699999876411
Q ss_pred HHHhccCCCCceee---cCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccC--CHH---HHHHHHHHHHhh
Q psy12587 151 QATFRSLDHKCLDI---LYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKK--NLE---LAIYSLNSLRSR 222 (390)
Q Consensus 151 ~~~~~~~~~~~~~v---i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K--~~~---~ll~a~~~l~~~ 222 (390)
....++.. .+|.++.+...... ......+. ....+.+.+.+|.-+..- +.+ .+++.+..+.+.
T Consensus 110 ------~~~~Nvl~t~ga~~~i~~~~l~~a~-~~~~~~~~--~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~ 180 (311)
T PF06258_consen 110 ------PRGPNVLPTLGAPNRITPERLAEAA-AAWAPRLA--ALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAA 180 (311)
T ss_pred ------CCCCceEecccCCCcCCHHHHHHHH-Hhhhhhhc--cCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 01223322 23444443332211 11122222 122445556667543322 223 566677777666
Q ss_pred cccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHc-CCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHH
Q psy12587 223 LSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKL-KLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPI 301 (390)
Q Consensus 223 ~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~-~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~ 301 (390)
.. ..+.|..+--.. .+..+...+. +-.+.+.+...-+..-+..+|+.||.++++.. .-.-+.
T Consensus 181 ~~------~~~~vttSRRTp--------~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~~La~ad~i~VT~D---SvSMvs 243 (311)
T PF06258_consen 181 YG------GSLLVTTSRRTP--------PEAEAALRELLKDNPGVYIWDGTGENPYLGFLAAADAIVVTED---SVSMVS 243 (311)
T ss_pred CC------CeEEEEcCCCCc--------HHHHHHHHHhhcCCCceEEecCCCCCcHHHHHHhCCEEEEcCc---cHHHHH
Confidence 44 678887765433 4444444333 22356644444444446799999999998654 123468
Q ss_pred hhhhcCCCEEEecCCC
Q psy12587 302 EAMFCKRPVIAVNSGG 317 (390)
Q Consensus 302 Ea~a~G~pvi~~~~~~ 317 (390)
||++.|+||..-+..+
T Consensus 244 EA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 244 EAAATGKPVYVLPLPG 259 (311)
T ss_pred HHHHcCCCEEEecCCC
Confidence 9999999999987655
|
The function of this family is unknown. |
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.043 Score=47.51 Aligned_cols=87 Identities=16% Similarity=0.112 Sum_probs=59.3
Q ss_pred CHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceE
Q psy12587 208 NLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCI 287 (390)
Q Consensus 208 ~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~ 287 (390)
..+.+.+.++.+.++ + ++++++|+.+.. +..++..+..+-...+.+.|..+-.|+..+++.||++
T Consensus 138 ~~~~~~~l~~~l~~~--~-----~~ivl~g~~~e~--------~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l~ 202 (279)
T cd03789 138 PAERFAALADRLLAR--G-----ARVVLTGGPAER--------ELAEEIAAALGGPRVVNLAGKTSLRELAALLARADLV 202 (279)
T ss_pred CHHHHHHHHHHHHHC--C-----CEEEEEechhhH--------HHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCEE
Confidence 346777777777765 2 778888865542 3444444443222445667888889999999999999
Q ss_pred EeCCCCCCCCccHHhhhhcCCCEEEec
Q psy12587 288 IYTPSNEHFGIVPIEAMFCKRPVIAVN 314 (390)
Q Consensus 288 v~ps~~e~~~~~~~Ea~a~G~pvi~~~ 314 (390)
|.+. .|..-+ |.++|+|+|+--
T Consensus 203 I~~D----sg~~Hl-A~a~~~p~i~l~ 224 (279)
T cd03789 203 VTND----SGPMHL-AAALGTPTVALF 224 (279)
T ss_pred EeeC----CHHHHH-HHHcCCCEEEEE
Confidence 9764 244444 579999999943
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.011 Score=54.37 Aligned_cols=82 Identities=9% Similarity=0.026 Sum_probs=59.7
Q ss_pred CcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecC----CCccccee-cCcceeeec-----C
Q psy12587 264 DNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS----GGPKESVV-DGRTGFLCE-----S 333 (390)
Q Consensus 264 ~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~----~~~~e~i~-~~~~g~~~~-----~ 333 (390)
.++.+.+++|+. ++++.+++..+-++ +.-++++||+++|+|+|+.+. ......+. .-+.|+.++ .
T Consensus 334 ~g~~v~~W~PQ~---~iL~H~~v~~FvTH--~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~ 408 (451)
T PLN03004 334 KGMVVKSWAPQV---PVLNHKAVGGFVTH--CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGF 408 (451)
T ss_pred CcEEEEeeCCHH---HHhCCCccceEecc--CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCc
Confidence 578888999998 58899998443333 334589999999999999664 33344443 335676663 3
Q ss_pred -CHHHHHHHHHHHhcCCh
Q psy12587 334 -NEEAFAKAMKKIVDNDG 350 (390)
Q Consensus 334 -~~~~l~~~i~~l~~~~~ 350 (390)
+.+++++++.++++++.
T Consensus 409 ~~~e~l~~av~~vm~~~~ 426 (451)
T PLN03004 409 VSSTEVEKRVQEIIGECP 426 (451)
T ss_pred cCHHHHHHHHHHHhcCHH
Confidence 78999999999998754
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.021 Score=53.39 Aligned_cols=80 Identities=9% Similarity=0.008 Sum_probs=53.3
Q ss_pred CcEEEecCCChHHHHHHHHhcce--EEeCCCCCCCCccHHhhhhcCCCEEEecCC----Cccc-ceecCcceeeec----
Q psy12587 264 DNVLFLTSPSDAAKISLFKFCHC--IIYTPSNEHFGIVPIEAMFCKRPVIAVNSG----GPKE-SVVDGRTGFLCE---- 332 (390)
Q Consensus 264 ~~v~~~g~~~~~e~~~~~~~adv--~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~----~~~e-~i~~~~~g~~~~---- 332 (390)
++..+.+++++. .+++...+ ||. -+.-++++||+++|+|+|+.+.. .... .++.-+.|+.+.
T Consensus 340 ~rg~v~~w~PQ~---~iL~h~~vg~fvt----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~ 412 (475)
T PLN02167 340 GRGLVCGWAPQV---EILAHKAIGGFVS----HCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYV 412 (475)
T ss_pred cCeeeeccCCHH---HHhcCcccCeEEe----eCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccc
Confidence 345667999887 47777554 552 22345899999999999996642 2222 233334565542
Q ss_pred -----C-CHHHHHHHHHHHhcCCh
Q psy12587 333 -----S-NEEAFAKAMKKIVDNDG 350 (390)
Q Consensus 333 -----~-~~~~l~~~i~~l~~~~~ 350 (390)
. +.+++++++.+++.+++
T Consensus 413 ~~~~~~~~~~~l~~av~~~m~~~~ 436 (475)
T PLN02167 413 SAYGEIVKADEIAGAVRSLMDGED 436 (475)
T ss_pred cccCCcccHHHHHHHHHHHhcCCH
Confidence 3 78999999999997653
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.05 Score=50.75 Aligned_cols=77 Identities=8% Similarity=0.059 Sum_probs=52.0
Q ss_pred CcEEEecCCChHHHHHHHHhc--ceEEeCCCCCCCCccHHhhhhcCCCEEEecC----CCccccee-cCcceeee-----
Q psy12587 264 DNVLFLTSPSDAAKISLFKFC--HCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS----GGPKESVV-DGRTGFLC----- 331 (390)
Q Consensus 264 ~~v~~~g~~~~~e~~~~~~~a--dv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~----~~~~e~i~-~~~~g~~~----- 331 (390)
.++.+.+++++. .++... ++||. .+.-++++||+++|+|+|+.+. ......+. .-+.|+.+
T Consensus 343 ~g~~v~~w~PQ~---~vL~h~~v~~fvt----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~ 415 (477)
T PLN02863 343 RGLVIRGWAPQV---AILSHRAVGAFLT----HCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGAD 415 (477)
T ss_pred CCEEecCCCCHH---HHhcCCCcCeEEe----cCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCC
Confidence 568888999987 477764 45552 2344589999999999999654 22333332 22456555
Q ss_pred cC-CHHHHHHHHHHHhc
Q psy12587 332 ES-NEEAFAKAMKKIVD 347 (390)
Q Consensus 332 ~~-~~~~l~~~i~~l~~ 347 (390)
.. +.+++.+++.+++.
T Consensus 416 ~~~~~~~v~~~v~~~m~ 432 (477)
T PLN02863 416 TVPDSDELARVFMESVS 432 (477)
T ss_pred CCcCHHHHHHHHHHHhh
Confidence 12 67899999999884
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.012 Score=54.61 Aligned_cols=81 Identities=7% Similarity=-0.014 Sum_probs=56.8
Q ss_pred CcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCC----Ccccce-ecCcceeeec----C-
Q psy12587 264 DNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSG----GPKESV-VDGRTGFLCE----S- 333 (390)
Q Consensus 264 ~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~----~~~e~i-~~~~~g~~~~----~- 333 (390)
.++.+.+++++. ++++...+..+-+. +.-++++||+.+|+|+|+.+.. .....+ +.-+.|..++ .
T Consensus 338 rg~vv~~W~PQ~---~iL~h~~vg~FitH--~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~ 412 (481)
T PLN02992 338 RGFVVPSWAPQA---EILAHQAVGGFLTH--CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPKEVI 412 (481)
T ss_pred CCEEEeecCCHH---HHhCCcccCeeEec--CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCCCcc
Confidence 468888999987 47888776333232 3446899999999999997652 233343 2334566652 3
Q ss_pred CHHHHHHHHHHHhcCC
Q psy12587 334 NEEAFAKAMKKIVDND 349 (390)
Q Consensus 334 ~~~~l~~~i~~l~~~~ 349 (390)
+.++++++|.+++.++
T Consensus 413 ~~~~l~~av~~vm~~~ 428 (481)
T PLN02992 413 SRSKIEALVRKVMVEE 428 (481)
T ss_pred cHHHHHHHHHHHhcCC
Confidence 7899999999999764
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.036 Score=51.79 Aligned_cols=92 Identities=5% Similarity=-0.005 Sum_probs=59.2
Q ss_pred cEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecC----CCcccce-ecCcceeeec-------
Q psy12587 265 NVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS----GGPKESV-VDGRTGFLCE------- 332 (390)
Q Consensus 265 ~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~----~~~~e~i-~~~~~g~~~~------- 332 (390)
.+.+.+++++. .+++.+++..+-++ +.-++++||+++|+|+|+.+. ......+ +.-+.|+.+.
T Consensus 340 g~~v~~w~PQ~---~iL~h~~vg~fvtH--~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~ 414 (480)
T PLN00164 340 GLVWPTWAPQK---EILAHAAVGGFVTH--CGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDN 414 (480)
T ss_pred CeEEeecCCHH---HHhcCcccCeEEee--cccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCC
Confidence 46677999988 57888885333332 234589999999999999664 2223333 3334566552
Q ss_pred C-CHHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy12587 333 S-NEEAFAKAMKKIVDNDGNIIQQFSQFGF 361 (390)
Q Consensus 333 ~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~ 361 (390)
. +.++++++|.+++.++.++.+.+++++.
T Consensus 415 ~~~~e~l~~av~~vm~~~~~~~~~~r~~a~ 444 (480)
T PLN00164 415 FVEAAELERAVRSLMGGGEEEGRKAREKAA 444 (480)
T ss_pred cCcHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 2 6799999999999765311334444443
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0043 Score=59.90 Aligned_cols=148 Identities=13% Similarity=0.104 Sum_probs=105.3
Q ss_pred CCeEEEEeecccccCCHHH-HHH---HHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHc----CCCC
Q psy12587 193 EDIVFLSINRYERKKNLEL-AIY---SLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKL----KLSD 264 (390)
Q Consensus 193 ~~~~i~~~g~~~~~K~~~~-ll~---a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~----~l~~ 264 (390)
+.+..+++-|+..+|...+ ++. .+.++++. |+.......+++.|...+.........+.+...++.. .+.+
T Consensus 526 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~-p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~ 604 (794)
T TIGR02093 526 NSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKED-PPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGD 604 (794)
T ss_pred cccchhhheechhhhHHHHHHhhhHHHHHHHHhC-CCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCC
Confidence 5677789999999998888 544 45555543 2211123689999987776444444444444444321 1334
Q ss_pred --cEEEecCCChHHHHHHHHhcceEEeCCC--CCCCCccHHhhhhcCCCEEEecCCCcccceec--CcceeeecCCHHHH
Q psy12587 265 --NVLFLTSPSDAAKISLFKFCHCIIYTPS--NEHFGIVPIEAMFCKRPVIAVNSGGPKESVVD--GRTGFLCESNEEAF 338 (390)
Q Consensus 265 --~v~~~g~~~~~e~~~~~~~adv~v~ps~--~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~--~~~g~~~~~~~~~l 338 (390)
+|.|+....-.-...++..||+....|. .|..|++=+-+|.-|.+.++|--|...|+.++ ++|++++-.+.+++
T Consensus 605 ~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ev 684 (794)
T TIGR02093 605 KLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFGLTVEEV 684 (794)
T ss_pred ceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcCCCHHHH
Confidence 6888776555544689999999988777 69999999999999999999999999998876 77899987676766
Q ss_pred HHH
Q psy12587 339 AKA 341 (390)
Q Consensus 339 ~~~ 341 (390)
.+.
T Consensus 685 ~~~ 687 (794)
T TIGR02093 685 EAL 687 (794)
T ss_pred HHH
Confidence 654
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0034 Score=60.52 Aligned_cols=148 Identities=13% Similarity=0.111 Sum_probs=105.8
Q ss_pred CCeEEEEeecccccCCHHH-HHHH---HHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcC----CCC
Q psy12587 193 EDIVFLSINRYERKKNLEL-AIYS---LNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLK----LSD 264 (390)
Q Consensus 193 ~~~~i~~~g~~~~~K~~~~-ll~a---~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~----l~~ 264 (390)
+.+.++++-|+..+|...+ ++.. +.++++. |+.......+++.|...+.........+.+...++..+ +.+
T Consensus 528 ~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~-p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~ 606 (798)
T PRK14985 528 QAIFDVQIKRLHEYKRQHLNLLHILALYKEIREN-PQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGD 606 (798)
T ss_pred hhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhC-CCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCC
Confidence 5677788999999998887 5544 4455543 21111237899999887765444444444444443331 223
Q ss_pred --cEEEecCCChHHHHHHHHhcceEEeCCC--CCCCCccHHhhhhcCCCEEEecCCCcccceec--CcceeeecCCHHHH
Q psy12587 265 --NVLFLTSPSDAAKISLFKFCHCIIYTPS--NEHFGIVPIEAMFCKRPVIAVNSGGPKESVVD--GRTGFLCESNEEAF 338 (390)
Q Consensus 265 --~v~~~g~~~~~e~~~~~~~adv~v~ps~--~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~--~~~g~~~~~~~~~l 338 (390)
+|.|+....-.-...++..||+....|. .|..|++=+-+|.-|.+.+++--|...|+.++ ++||+++-.+.+++
T Consensus 607 ~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG~~~~ev 686 (798)
T PRK14985 607 KLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFGHTVEQV 686 (798)
T ss_pred ceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeCCCHHHH
Confidence 6888877555555689999999998777 69999999999999999999999998888875 77999997666665
Q ss_pred HHH
Q psy12587 339 AKA 341 (390)
Q Consensus 339 ~~~ 341 (390)
.+.
T Consensus 687 ~~~ 689 (798)
T PRK14985 687 KAL 689 (798)
T ss_pred HHH
Confidence 554
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.03 Score=51.59 Aligned_cols=93 Identities=11% Similarity=0.105 Sum_probs=61.7
Q ss_pred CCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecC----CCcccceecC-cceeeec-----
Q psy12587 263 SDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS----GGPKESVVDG-RTGFLCE----- 332 (390)
Q Consensus 263 ~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~----~~~~e~i~~~-~~g~~~~----- 332 (390)
.+++.+.+++|+. ++++...+..+-++ +..++++||+++|+|+|+.+. ......+.+. +.|+-+.
T Consensus 316 ~~~~~i~~W~PQ~---~iL~H~~v~~FvtH--cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~ 390 (449)
T PLN02173 316 KDKSLVLKWSPQL---QVLSNKAIGCFMTH--CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKES 390 (449)
T ss_pred CCceEEeCCCCHH---HHhCCCccceEEec--CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccC
Confidence 3678888999987 57888775444343 345799999999999999664 2233344332 3454442
Q ss_pred -C-CHHHHHHHHHHHhcCChhHHHHHHHHHHH
Q psy12587 333 -S-NEEAFAKAMKKIVDNDGNIIQQFSQFGFN 362 (390)
Q Consensus 333 -~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~ 362 (390)
. +.+++++++.+++.+++ .+++++++++
T Consensus 391 ~~~~~e~v~~av~~vm~~~~--~~~~r~~a~~ 420 (449)
T PLN02173 391 GIAKREEIEFSIKEVMEGEK--SKEMKENAGK 420 (449)
T ss_pred CcccHHHHHHHHHHHhcCCh--HHHHHHHHHH
Confidence 1 67999999999997753 3444444433
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.04 Score=51.63 Aligned_cols=79 Identities=9% Similarity=-0.025 Sum_probs=52.6
Q ss_pred CcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCC----Ccc-cceecCcceeeec------
Q psy12587 264 DNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSG----GPK-ESVVDGRTGFLCE------ 332 (390)
Q Consensus 264 ~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~----~~~-e~i~~~~~g~~~~------ 332 (390)
+++.+.+++|+. ++++...+..+-+ .+.-++++||+.+|+|+|+.+.. ... ..++.-+.|..+.
T Consensus 342 ~~g~v~~W~PQ~---~iL~H~~v~~Fvt--H~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~ 416 (481)
T PLN02554 342 DIGKVIGWAPQV---AVLAKPAIGGFVT--HCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGD 416 (481)
T ss_pred cCceEEeeCCHH---HHhCCcccCcccc--cCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecccccc
Confidence 567778999987 4775444432222 23346899999999999997642 222 2233334555542
Q ss_pred -------C-CHHHHHHHHHHHhc
Q psy12587 333 -------S-NEEAFAKAMKKIVD 347 (390)
Q Consensus 333 -------~-~~~~l~~~i~~l~~ 347 (390)
. +.+++.++|.+++.
T Consensus 417 ~~~~~~~~~~~e~l~~av~~vm~ 439 (481)
T PLN02554 417 LLAGEMETVTAEEIERGIRCLME 439 (481)
T ss_pred ccccccCeEcHHHHHHHHHHHhc
Confidence 3 88999999999996
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.023 Score=52.51 Aligned_cols=83 Identities=8% Similarity=0.124 Sum_probs=55.8
Q ss_pred CCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecC----CCcccceecC-cceeeec-----
Q psy12587 263 SDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS----GGPKESVVDG-RTGFLCE----- 332 (390)
Q Consensus 263 ~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~----~~~~e~i~~~-~~g~~~~----- 332 (390)
.++..+.+++|+. ++++..++..+-++ +..++++||+.+|+|+|+.+. ......+.+. +.|+-+.
T Consensus 326 ~~~g~v~~W~PQ~---~iL~h~~vg~fvtH--~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~ 400 (455)
T PLN02152 326 EEVGMIVSWCSQI---EVLRHRAVGCFVTH--CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEG 400 (455)
T ss_pred cCCeEEEeeCCHH---HHhCCcccceEEee--CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCC
Confidence 4667778999987 57888886444333 345689999999999999664 2222333221 1333331
Q ss_pred C-CHHHHHHHHHHHhcCCh
Q psy12587 333 S-NEEAFAKAMKKIVDNDG 350 (390)
Q Consensus 333 ~-~~~~l~~~i~~l~~~~~ 350 (390)
. +.+++++++.++++++.
T Consensus 401 ~~~~e~l~~av~~vm~~~~ 419 (455)
T PLN02152 401 LVERGEIRRCLEAVMEEKS 419 (455)
T ss_pred cCcHHHHHHHHHHHHhhhH
Confidence 3 78999999999997543
|
|
| >PF15024 Glyco_transf_18: Glycosyltransferase family 18 | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.025 Score=52.21 Aligned_cols=152 Identities=14% Similarity=0.066 Sum_probs=102.2
Q ss_pred CCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCC
Q psy12587 193 EDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSP 272 (390)
Q Consensus 193 ~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~ 272 (390)
.+..++|--...-+++-+..++++.+..+ ++-.|.+.... ...+++.|.-+|.+
T Consensus 277 ~~~AlVyGK~~~~w~~k~~~l~~l~~~~e---------ih~tV~~~~~~-----------------~~~~P~~V~NHG~l 330 (559)
T PF15024_consen 277 KNQALVYGKERYMWKGKEKYLDVLHKYME---------IHGTVYDEPQR-----------------PPNVPSFVKNHGIL 330 (559)
T ss_pred cceeEEEccchhhhcCcHHHHHHHHhhcE---------EEEEeccCCCC-----------------CcccchhhhhcCcC
Confidence 33444554444457788888888866432 66666554321 12235567778999
Q ss_pred ChHHHHHHHHhcceEEeCCC-CCCCCccHHhhhhcCCCEEEecCCCc---------------cc----------ceecCc
Q psy12587 273 SDAAKISLFKFCHCIIYTPS-NEHFGIVPIEAMFCKRPVIAVNSGGP---------------KE----------SVVDGR 326 (390)
Q Consensus 273 ~~~e~~~~~~~adv~v~ps~-~e~~~~~~~Ea~a~G~pvi~~~~~~~---------------~e----------~i~~~~ 326 (390)
+..|+..+++.+.++|-... +| |=+.+||+|.|+|.|-...... ++ ++. .-
T Consensus 331 ~~~ef~~lL~~akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG-~P 407 (559)
T PF15024_consen 331 SGDEFQQLLRKAKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIG-EP 407 (559)
T ss_pred CHHHHHHHHHhhhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCC-CC
Confidence 99999999999999996443 23 4478999999999988654211 11 111 11
Q ss_pred ceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHh
Q psy12587 327 TGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNN 383 (390)
Q Consensus 327 ~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
..+.|+. |.+++.++|+++++++. ..++--.|+.+.+.+++..+++.
T Consensus 408 hVytVd~~n~~~v~~Avk~il~~~v----------~Py~P~efT~egmLeRv~~~ie~ 455 (559)
T PF15024_consen 408 HVYTVDINNSTEVEAAVKAILATPV----------EPYLPYEFTCEGMLERVNALIEK 455 (559)
T ss_pred eEEEEcCCCHHHHHHHHHHHHhcCC----------CCcCCcccCHHHHHHHHHHHHHh
Confidence 3456777 99999999999998765 12333578899999998887764
|
|
| >PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.21 Score=43.57 Aligned_cols=267 Identities=9% Similarity=0.084 Sum_probs=153.9
Q ss_pred cCCCEEEEccccc---chhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHH---H
Q psy12587 75 EKPDLVFCDLVSI---CIPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTK---S 148 (390)
Q Consensus 75 ~~~Dvi~~~~~~~---~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~---~ 148 (390)
.+.||++=-+... .....+..+.|+|.+..+.+.........+.+....+ ..-...|.|.+.-+... .
T Consensus 72 ~~lDVlIEmg~ql~~~~~~~~~~~G~KvV~y~~GndYv~~~E~~lF~k~~~~~------f~~~~yD~VW~lPq~~~~~~~ 145 (364)
T PF10933_consen 72 DELDVLIEMGAQLDPEWLDYMRARGGKVVSYRCGNDYVMDIESMLFNKPSGHL------FNGAPYDEVWTLPQFENTCAP 145 (364)
T ss_pred ccCCEEEEccCccCHHHHHHHHHcCCeEEEEeCCchHHHHhhHHhcCCCCCcc------CCCCCCceeEeccchhhhchH
Confidence 6889998766322 2334455569999999987654433322222221111 11346788887665333 2
Q ss_pred HHHHHhccCCCCceeecCCCCCCCCCCCCCccc--hhhhcCCCCCCCCeEE-EEeecccccCCHHHHHHHHHHHHhhccc
Q psy12587 149 VVQATFRSLDHKCLDILYPSVYTEGLEKTTPEP--IENVLNPLPGKEDIVF-LSINRYERKKNLELAIYSLNSLRSRLSD 225 (390)
Q Consensus 149 ~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~i-~~~g~~~~~K~~~~ll~a~~~l~~~~~~ 225 (390)
.+.-.+ ..+++++|.-.++-+++...... ....+|=-|...+.++ +|=-+++--|.--.=+-++.+.-+..|+
T Consensus 146 yl~~l~----r~Pv~~vP~iWsP~F~~~~~~~l~~~~~~FGY~p~~~~~RvavfEPNi~vvK~~~~PmLi~E~aYR~~P~ 221 (364)
T PF10933_consen 146 YLETLH----RCPVRVVPHIWSPRFLDQRIAQLPEHGLRFGYQPGRPGKRVAVFEPNISVVKTCFIPMLICEEAYRADPD 221 (364)
T ss_pred HHHHHh----cCCceeeCccCCchhHHHHHHhhhhcCCccccccCCCCceEEEecCCceEEeecCccHHHHHHHHHhChh
Confidence 333332 46889999887776655422110 0011110021222222 2333334445444434445555555554
Q ss_pred ccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCC--CCcEEEecCCChHHHHHHHH-hcceEEeCCCCCCCCccHHh
Q psy12587 226 EMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKL--SDNVLFLTSPSDAAKISLFK-FCHCIIYTPSNEHFGIVPIE 302 (390)
Q Consensus 226 ~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l--~~~v~~~g~~~~~e~~~~~~-~adv~v~ps~~e~~~~~~~E 302 (390)
.+..+.+...... .++ +.+...+..+.+ .....|.|..+-.+ +|+ ..|++|.--...+....-+|
T Consensus 222 ----~v~~~~V~Nt~~~-ke~----~~F~~f~~~ldlvr~gkasfegR~~~p~---fla~~tD~VvSHqWeN~lNYlY~d 289 (364)
T PF10933_consen 222 ----AVEHVYVTNTYHL-KEH----PTFVNFANSLDLVRDGKASFEGRFDFPD---FLAQHTDAVVSHQWENPLNYLYYD 289 (364)
T ss_pred ----hcceEEEecchhh-hcC----HHHHHHHHhhHHhhcCeeEEeeecChHH---HHHhCCCEEEeccccchhhHHHHH
Confidence 3554444433221 111 555566665544 45678888876664 444 47888854433456667899
Q ss_pred hhhcCCCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHH
Q psy12587 303 AMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQ 371 (390)
Q Consensus 303 a~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (390)
|+.-|=|.|-.. .++.+ .|+.++. |..+=++++.+++.+-+...+..++++++.+ ..+++.
T Consensus 290 aLyggYPLVHNS-----~~l~d--~GYYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l-~~~~p~ 351 (364)
T PF10933_consen 290 ALYGGYPLVHNS-----PLLKD--VGYYYPDFDAFEGARQLLRAIREHDADLDAYRARARRLL-DRLSPE 351 (364)
T ss_pred HHhcCCCcccCc-----chhcc--cCcCCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHH-HhhCCC
Confidence 999999999743 45533 8999999 9999999999988765547888888888877 566544
|
|
| >COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.33 Score=43.17 Aligned_cols=245 Identities=11% Similarity=0.109 Sum_probs=125.8
Q ss_pred cCCCEEEEcccc---------cc------hhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceE
Q psy12587 75 EKPDLVFCDLVS---------IC------IPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKI 139 (390)
Q Consensus 75 ~~~Dvi~~~~~~---------~~------~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~i 139 (390)
.+.|++++.+.. +. +.++++.++|+++.-|+..+. .+...+++....++.++.+
T Consensus 88 ~~~d~~I~~Gg~l~~d~~~~~~~~~~~~~~~la~l~~kp~~~~g~svGP~-----------~~~~s~~~~~~~~~~~s~i 156 (385)
T COG2327 88 GKADLIIIGGGGLLQDVTSSRSIIYYGGSILLARLAGKPTFFFGQSVGPL-----------KHPLSRQLLNYVLGGCSAI 156 (385)
T ss_pred hhCCEEEEcCcccccCccccceehhhHHHHHHHHHcCCCEEEEeccCCCc-----------cCHHHHHHHHHHhcCCcEE
Confidence 789999875521 11 233455669999998875432 2333456677888999999
Q ss_pred EEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHH-----HHHH
Q psy12587 140 VVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLE-----LAIY 214 (390)
Q Consensus 140 i~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~-----~ll~ 214 (390)
++=-+...+.++.. +. +..... |+.+.-+.+......... ....+.+.+....+.+...-+ .+-+
T Consensus 157 ~vRD~~S~~llk~~--gi---~a~l~~---D~Af~L~~~~~~~~~~~~--~~~~~~~~i~lr~~~~~~t~~~~~~~~v~~ 226 (385)
T COG2327 157 SVRDPVSYELLKQL--GI---NARLVT---DPAFLLPASSQNATASDV--EAREKTVAITLRGLHPDNTAQRSILKYVNE 226 (385)
T ss_pred EEecHHhHHHHHHc--CC---CeEeec---Ccceeccccccccccccc--ccccceEEEEecccCCchhhhHHHHHHHHH
Confidence 99888888888854 22 333333 333222111111111000 111233333333333322111 2223
Q ss_pred HHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCC
Q psy12587 215 SLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNE 294 (390)
Q Consensus 215 a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e 294 (390)
++..+....+. +.++...-.+... + ..-.+..+....-.+++.+......+++...++++|++|-.-.
T Consensus 227 ~l~~~~~~~~~----~~~i~~~~~~~s~---d---~~va~~ia~~~~~~~~i~~~~d~~~~~~~~~l~~~dl~Vg~R~-- 294 (385)
T COG2327 227 ALDLVERQVKA----LWRITLIDYGASD---D---LAVADAIAQLVLDSAEILVSSDEYAEELGGILAACDLIVGMRL-- 294 (385)
T ss_pred HHHHHHHhhhc----ceEEEeeeccccc---h---hHHHHHHHhhcCCccceEeecchHHHHHHHHhccCceEEeehh--
Confidence 33332111111 2333332222221 0 1334444444433466766543335677789999999885321
Q ss_pred CCCccHHhhhhcCCCEEEecCC-Ccccceec-Ccceeee--cC-CHHHHHHHHHHHhcCChhHHHH
Q psy12587 295 HFGIVPIEAMFCKRPVIAVNSG-GPKESVVD-GRTGFLC--ES-NEEAFAKAMKKIVDNDGNIIQQ 355 (390)
Q Consensus 295 ~~~~~~~Ea~a~G~pvi~~~~~-~~~e~i~~-~~~g~~~--~~-~~~~l~~~i~~l~~~~~~~~~~ 355 (390)
-+++=|++.|+|+|+-... -...+.++ +..++.. .+ +.+.+.+...+.+.+.++.+++
T Consensus 295 ---HsaI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~~i~~~~~~~l~~~~~e~~~~~~~~~~~ 357 (385)
T COG2327 295 ---HSAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFAIDIDPLDAEILSAVVLERLTKLDELRER 357 (385)
T ss_pred ---HHHHHHHhcCCCeEEEeecHHHHHHHHHcCCCcccccCCCCchHHHHHHHHHHHhccHHHHhh
Confidence 2455599999999996542 12222222 2233333 34 8888998888887766623333
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.097 Score=48.51 Aligned_cols=77 Identities=10% Similarity=-0.004 Sum_probs=51.2
Q ss_pred EEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCC----Ccccce-ecCcceeeec------C-
Q psy12587 266 VLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSG----GPKESV-VDGRTGFLCE------S- 333 (390)
Q Consensus 266 v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~----~~~e~i-~~~~~g~~~~------~- 333 (390)
+.+.+++++.+ +++...+..+-++ +.-++++||+++|+|+|+.+.. .....+ +.-..|+-+. .
T Consensus 337 l~v~~W~PQ~~---vL~h~~vg~fvtH--~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v 411 (470)
T PLN03015 337 LVVTQWAPQVE---ILSHRSIGGFLSH--CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVI 411 (470)
T ss_pred eEEEecCCHHH---HhccCccCeEEec--CCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCcc
Confidence 56779999885 6666665433332 2345899999999999997642 122222 2223454442 3
Q ss_pred CHHHHHHHHHHHhc
Q psy12587 334 NEEAFAKAMKKIVD 347 (390)
Q Consensus 334 ~~~~l~~~i~~l~~ 347 (390)
+.++++++|++++.
T Consensus 412 ~~e~i~~~v~~lm~ 425 (470)
T PLN03015 412 GREEVASLVRKIVA 425 (470)
T ss_pred CHHHHHHHHHHHHc
Confidence 78999999999995
|
|
| >PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.015 Score=46.04 Aligned_cols=80 Identities=15% Similarity=0.125 Sum_probs=51.1
Q ss_pred HHHhh-cCCCEEEEcccccchh-HHHh--hc----ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEE
Q psy12587 70 VAWYS-EKPDLVFCDLVSICIP-ILQA--KQ----FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVV 141 (390)
Q Consensus 70 ~~~~~-~~~Dvi~~~~~~~~~~-~~~~--~~----~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~ 141 (390)
..+++ .+||+|++..+..... +..+ .+ +|++..+-+..... . .|+-..+|..++
T Consensus 82 ~~~l~~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H---~---------------~W~~~~~D~y~V 143 (169)
T PF06925_consen 82 IRLLREFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVH---P---------------FWIHPGVDRYFV 143 (169)
T ss_pred HHHHhhcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCC---c---------------CeecCCCCEEEE
Confidence 35666 9999999998753333 3322 22 55443333321100 0 233457899999
Q ss_pred ccHhHHHHHHHHhccCCCCceeecCCCC
Q psy12587 142 NSEFTKSVVQATFRSLDHKCLDILYPSV 169 (390)
Q Consensus 142 ~s~~~~~~~~~~~~~~~~~~~~vi~~~~ 169 (390)
.|+.+++.+.+. |++++++.+..-+|
T Consensus 144 ase~~~~~l~~~--Gi~~~~I~vtGiPV 169 (169)
T PF06925_consen 144 ASEEVKEELIER--GIPPERIHVTGIPV 169 (169)
T ss_pred CCHHHHHHHHHc--CCChhHEEEeCccC
Confidence 999999999985 67788888876543
|
; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process |
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.31 Score=42.66 Aligned_cols=178 Identities=15% Similarity=0.085 Sum_probs=95.3
Q ss_pred hhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCC
Q psy12587 94 AKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEG 173 (390)
Q Consensus 94 ~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~ 173 (390)
..++|+++.-.+..+... ...+++.+.+++.+|.+.+=.+...+.+++. + . ++.+.|-++ .
T Consensus 97 ~~~k~~~~~g~giGP~~~-----------~~~r~~~~~~l~~~~~i~vRD~~S~~~l~~~-g-~---~i~~~~D~a---~ 157 (298)
T TIGR03609 97 LFGKPVILWGQGIGPLRR-----------RLSRWLVRRVLRGCRAISVRDAASYRLLKRL-G-I---PAELAADPV---W 157 (298)
T ss_pred HcCCCEEEEecccCCcCC-----------HHHHHHHHHHHccCCEEEEeCHHHHHHHHHh-C-C---CceEeCChh---h
Confidence 344888887776433211 1223556777899999998777777777654 2 2 455555432 1
Q ss_pred CCCCCccchhhhcCCCCCCCCeEEEEeeccc--ccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHH
Q psy12587 174 LEKTTPEPIENVLNPLPGKEDIVFLSINRYE--RKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYK 251 (390)
Q Consensus 174 ~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~--~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~ 251 (390)
.-+... ..... ..+.+.+.+.+..+. .....+.+.+++..+.++.. .+++++...... +. +
T Consensus 158 ~l~~~~--~~~~~---~~~~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g------~~v~~i~~~~~~---D~---~ 220 (298)
T TIGR03609 158 LLPPEP--WPGGE---PLPEPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTG------AFVLFLPFQQPQ---DL---P 220 (298)
T ss_pred hCCCCc--ccccc---cCCCCeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhC------CeEEEEeCCcch---hH---H
Confidence 111100 00000 112333433333221 11234567777777766532 455454432211 11 2
Q ss_pred HHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEec
Q psy12587 252 ELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVN 314 (390)
Q Consensus 252 ~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~ 314 (390)
..+++.+.+.-+..+ ....+..|+..++++||++|.... -.++=|+.+|+|+|+-.
T Consensus 221 ~~~~l~~~~~~~~~i--~~~~~~~e~~~~i~~~~~vI~~Rl-----H~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 221 LARALRDQLLGPAEV--LSPLDPEELLGLFASARLVIGMRL-----HALILAAAAGVPFVALS 276 (298)
T ss_pred HHHHHHHhcCCCcEE--EecCCHHHHHHHHhhCCEEEEech-----HHHHHHHHcCCCEEEee
Confidence 333333333322333 356677899999999998885442 24556999999999854
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.12 Score=48.25 Aligned_cols=91 Identities=14% Similarity=0.141 Sum_probs=58.9
Q ss_pred CCcEEEecCCChHHHHHHHHh--cceEEeCCCCCCCCccHHhhhhcCCCEEEecCC----CcccceecC-cceeee----
Q psy12587 263 SDNVLFLTSPSDAAKISLFKF--CHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSG----GPKESVVDG-RTGFLC---- 331 (390)
Q Consensus 263 ~~~v~~~g~~~~~e~~~~~~~--adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~----~~~e~i~~~-~~g~~~---- 331 (390)
.+++.+.+++|+.+ +++. +.+||. .+.-++++||+.+|+|+|+.+.- ....++.+. +.|+.+
T Consensus 336 ~~~g~v~~W~PQ~~---iL~H~~v~~Fvt----H~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~ 408 (480)
T PLN02555 336 GDKGKIVQWCPQEK---VLAHPSVACFVT----HCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGE 408 (480)
T ss_pred CCceEEEecCCHHH---HhCCCccCeEEe----cCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCc
Confidence 46778889999874 6644 444552 23356899999999999997642 223333332 456555
Q ss_pred --c-C-CHHHHHHHHHHHhcCChhHHHHHHHHHHH
Q psy12587 332 --E-S-NEEAFAKAMKKIVDNDGNIIQQFSQFGFN 362 (390)
Q Consensus 332 --~-~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~ 362 (390)
. . +.+++.+++.+++.+++ -+++++++++
T Consensus 409 ~~~~~v~~~~v~~~v~~vm~~~~--g~~~r~ra~~ 441 (480)
T PLN02555 409 AENKLITREEVAECLLEATVGEK--AAELKQNALK 441 (480)
T ss_pred cccCcCcHHHHHHHHHHHhcCch--HHHHHHHHHH
Confidence 1 2 68999999999997643 3444444443
|
|
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.066 Score=47.34 Aligned_cols=132 Identities=14% Similarity=0.134 Sum_probs=78.3
Q ss_pred CCeEEEEeecccccCCH--HHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEec
Q psy12587 193 EDIVFLSINRYERKKNL--ELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLT 270 (390)
Q Consensus 193 ~~~~i~~~g~~~~~K~~--~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g 270 (390)
++.+++..|.-.+.|.+ +.+.+.+..+.++ +..+++.|+++.+ .+..++..+..+ +..+.|
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~-------~~~~vl~~g~~~e-------~~~~~~i~~~~~---~~~l~g 241 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLAR-------GLQIVLPWGNDAE-------KQRAERIAEALP---GAVVLP 241 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC-------CCeEEEeCCCHHH-------HHHHHHHHhhCC---CCeecC
Confidence 56777777765666765 4677777777654 2677777544321 022334433332 235678
Q ss_pred CCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccce-ecCcc-ee----eecC-CHHHHHHHHH
Q psy12587 271 SPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESV-VDGRT-GF----LCES-NEEAFAKAMK 343 (390)
Q Consensus 271 ~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i-~~~~~-g~----~~~~-~~~~l~~~i~ 343 (390)
..+=.|+..+++.||++|..-. |..=+ |.|+|+|+|+--.+..+... .-+.+ .. .... +++++.+++.
T Consensus 242 ~~sL~el~ali~~a~l~I~~DS----gp~Hl-Aaa~g~P~i~lfg~t~p~~~~P~~~~~~~~~~~~~~~I~~~~V~~ai~ 316 (319)
T TIGR02193 242 KMSLAEVAALLAGADAVVGVDT----GLTHL-AAALDKPTVTLYGATDPGRTGGYGKPNVALLGESGANPTPDEVLAALE 316 (319)
T ss_pred CCCHHHHHHHHHcCCEEEeCCC----hHHHH-HHHcCCCEEEEECCCCHhhcccCCCCceEEccCccCCCCHHHHHHHHH
Confidence 8899999999999999997542 33333 77899999983211111110 00111 01 1334 7888888887
Q ss_pred HHh
Q psy12587 344 KIV 346 (390)
Q Consensus 344 ~l~ 346 (390)
+++
T Consensus 317 ~~~ 319 (319)
T TIGR02193 317 ELL 319 (319)
T ss_pred hhC
Confidence 653
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.53 Score=40.38 Aligned_cols=185 Identities=15% Similarity=0.115 Sum_probs=94.1
Q ss_pred cccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCC
Q psy12587 96 QFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLE 175 (390)
Q Consensus 96 ~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~ 175 (390)
++|+++.-.+.... .....+...+.++++++.+.+=.+...+.+.+. +.+. ++.++|...= ...
T Consensus 99 ~~pv~~~g~g~gp~-----------~~~~~~~~~~~~l~~~~~i~vRD~~S~~~l~~~--g~~~-~~~~~~D~af--~l~ 162 (286)
T PF04230_consen 99 GKPVIILGQGIGPF-----------RSEEFKKLLRRILSKADYISVRDEYSYELLKKL--GISG-NVKLVPDPAF--LLP 162 (286)
T ss_pred CCCeEEECceECcc-----------CCHHHHHHHHHHHhCCCEEEECCHHHHHHHHHc--CCCC-CcEEEeCchh--hcC
Confidence 38888776654111 111223445667888999888777777755553 3312 7777776541 111
Q ss_pred CCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHH
Q psy12587 176 KTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGV 255 (390)
Q Consensus 176 ~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~ 255 (390)
+......... +......+..........-.+.+.+.+..+.+.... +.+......+... .......
T Consensus 163 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-----~~~~~~~ 228 (286)
T PF04230_consen 163 PSYPDEDKSK----PKRNYISVSNSPSRNNEEYIEEIAELIQRLLDKGYK-----IVLLPFSPSDDDE-----DDDDFNE 228 (286)
T ss_pred cccccccccc----cccceeeeccccchhhhhHHHHHHHHHHHhhcccce-----eEEEEeeeccchh-----hHHHHHh
Confidence 1111000000 000111111111112233455566677776664332 4444444333220 0011111
Q ss_pred HHH-HcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecC
Q psy12587 256 LVK-KLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS 315 (390)
Q Consensus 256 ~~~-~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~ 315 (390)
... ..............+..|+..++++|+++|.... - ..+=|+++|+|+|+-+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Is~Rl----H-~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 229 IDIKAEKFFNVIIIDYSLSPDELLELISQADLVISMRL----H-GAILALSLGVPVIAISY 284 (286)
T ss_pred hhhhcccccceeEecCCCCHHHHHHHHhcCCEEEecCC----H-HHHHHHHcCCCEEEEec
Confidence 110 1122234455667888999999999999996543 2 34559999999998653
|
CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ]. |
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.013 Score=53.12 Aligned_cols=93 Identities=15% Similarity=0.144 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHHHhh---cCCCEEEEcccccchhHHHhhc---ccEEEEeecCCccccchhhhh----hhhcccch
Q psy12587 56 ALCMYLRMIVIALYVAWYS---EKPDLVFCDLVSICIPILQAKQ---FKVLFYCHYPDQLLSKQGSFL----KSIYRFPL 125 (390)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~---~~~Dvi~~~~~~~~~~~~~~~~---~~~v~~~h~~~~~~~~~~~~~----~~~~~~~~ 125 (390)
.++.|+..+.......+.+ .+||+||.|.....+.+..+++ +|...+-|...-.....+... ..-++...
T Consensus 378 ~lWPyLe~fa~d~~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~ 457 (550)
T PF00862_consen 378 DLWPYLEEFADDAEREILAELQGKPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSC 457 (550)
T ss_dssp G-GGGHHHHHHHHHHHHHHHHTS--SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHH
T ss_pred hchhhHHHHHHHHHHHHHHHhCCCCcEEEeccCcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchh
Confidence 4555555554433332222 7899999999766665554444 999999997532111111100 11111111
Q ss_pred h-hHHHHHhcCcceEEEccHhHHH
Q psy12587 126 N-KLEEWTTCKADKIVVNSEFTKS 148 (390)
Q Consensus 126 ~-~~~~~~~~~ad~ii~~s~~~~~ 148 (390)
+ ..+..+++.||.||+.+.....
T Consensus 458 qftAd~iamn~adfIItST~QEI~ 481 (550)
T PF00862_consen 458 QFTADLIAMNAADFIITSTYQEIA 481 (550)
T ss_dssp HHHHHHHHHHHSSEEEESSHHHHH
T ss_pred hhhHHHHHhhcCCEEEEcchHhhc
Confidence 1 2345678999999998865444
|
4.1.13 from EC in the following reaction: |
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.041 Score=49.06 Aligned_cols=100 Identities=15% Similarity=0.160 Sum_probs=66.6
Q ss_pred CCCeEEEEeecc-cccCCHH--HHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEE
Q psy12587 192 KEDIVFLSINRY-ERKKNLE--LAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLF 268 (390)
Q Consensus 192 ~~~~~i~~~g~~-~~~K~~~--~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~ 268 (390)
+.+++++..|.- .+.|.+. ...+.++.+.++ +..+++.|+..+. +..++..+..+ ...+.+
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~-------~~~ivl~G~~~e~--------~~~~~i~~~~~-~~~~~l 236 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQ-------GYQVVLFGSAKDH--------PAGNEIEALLP-GELRNL 236 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHC-------CCEEEEEEChhhH--------HHHHHHHHhCC-cccccC
Confidence 356777777763 4666554 677777777653 2678888876542 33333333332 123447
Q ss_pred ecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEE
Q psy12587 269 LTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIA 312 (390)
Q Consensus 269 ~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~ 312 (390)
.|..+=.|+..+++.||++|..-. |..-+ |.|.|+|+|+
T Consensus 237 ~g~~sL~el~ali~~a~l~I~~DS----Gp~Hl-AaA~~~P~i~ 275 (334)
T TIGR02195 237 AGETSLDEAVDLIALAKAVVTNDS----GLMHV-AAALNRPLVA 275 (334)
T ss_pred CCCCCHHHHHHHHHhCCEEEeeCC----HHHHH-HHHcCCCEEE
Confidence 788888999999999999997541 33333 7899999998
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.2 Score=44.31 Aligned_cols=98 Identities=11% Similarity=0.068 Sum_probs=61.6
Q ss_pred CCeEEEEeecccccCCH--HHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEec
Q psy12587 193 EDIVFLSINRYERKKNL--ELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLT 270 (390)
Q Consensus 193 ~~~~i~~~g~~~~~K~~--~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g 270 (390)
.+++++..|.-...|.+ +...+.+..+.++ +..+++.|+++.+ . +..++..+. .+++.+.|
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~-------~~~ivl~~G~~~e----~---~~~~~i~~~---~~~~~l~g 240 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPS-------GLRIKLPWGAEHE----E---QRAKRLAEG---FPYVEVLP 240 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHC-------CCeEEEeCCCHHH----H---HHHHHHHcc---CCcceecC
Confidence 44554455544455544 3677777777554 2667675333321 0 223333322 23577789
Q ss_pred CCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEE
Q psy12587 271 SPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIA 312 (390)
Q Consensus 271 ~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~ 312 (390)
..+=.|+..+++.||++|.... |..-+ |.|+|+|+|+
T Consensus 241 ~~sL~elaali~~a~l~I~nDS----Gp~Hl-A~A~g~p~va 277 (322)
T PRK10964 241 KLSLEQVARVLAGAKAVVSVDT----GLSHL-TAALDRPNIT 277 (322)
T ss_pred CCCHHHHHHHHHhCCEEEecCC----cHHHH-HHHhCCCEEE
Confidence 8999999999999999997542 33334 8899999999
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.074 Score=47.77 Aligned_cols=103 Identities=13% Similarity=0.121 Sum_probs=67.6
Q ss_pred CCeEEEEeecccccCCH--HHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEec
Q psy12587 193 EDIVFLSINRYERKKNL--ELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLT 270 (390)
Q Consensus 193 ~~~~i~~~g~~~~~K~~--~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g 270 (390)
++++++..|.-.+.|.+ +.+.+.++.+.+. +..++++|+.... +. +..++..+...-...+.+.|
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~-------~~~vvl~ggp~e~-----e~-~~~~~i~~~~~~~~~~~l~g 249 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQAR-------GYEVVLTSGPDKD-----DL-ACVNEIAQGCQTPPVTALAG 249 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHC-------CCeEEEEcCCChH-----HH-HHHHHHHHhcCCCccccccC
Confidence 56777888876667765 4677777777553 2678888754321 00 22233333332233466789
Q ss_pred CCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEe
Q psy12587 271 SPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAV 313 (390)
Q Consensus 271 ~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~ 313 (390)
..+=.|+..+++.||++|..- .|..-+ |.|+|+|+|+-
T Consensus 250 ~~sL~el~ali~~a~l~v~nD----SGp~Hl-AaA~g~P~v~l 287 (352)
T PRK10422 250 KTTFPELGALIDHAQLFIGVD----SAPAHI-AAAVNTPLICL 287 (352)
T ss_pred CCCHHHHHHHHHhCCEEEecC----CHHHHH-HHHcCCCEEEE
Confidence 999999999999999999754 133333 78999999983
|
|
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.44 Score=44.66 Aligned_cols=80 Identities=15% Similarity=0.087 Sum_probs=51.6
Q ss_pred CCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCC----ccccee-cCcceeee------
Q psy12587 263 SDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGG----PKESVV-DGRTGFLC------ 331 (390)
Q Consensus 263 ~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~----~~e~i~-~~~~g~~~------ 331 (390)
..++.+.|++++. .++...++..+-+ .+..++++||+++|+|+|+.+..+ ....+. .-+.|+-+
T Consensus 343 ~~g~~v~~w~pq~---~iL~h~~v~~fvt--H~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~ 417 (491)
T PLN02534 343 GRGLLIKGWAPQV---LILSHPAIGGFLT--HCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPV 417 (491)
T ss_pred cCCeeccCCCCHH---HHhcCCccceEEe--cCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccc
Confidence 3567788999987 4788888733323 234568999999999999976521 111111 11112211
Q ss_pred --------c-C-CHHHHHHHHHHHhc
Q psy12587 332 --------E-S-NEEAFAKAMKKIVD 347 (390)
Q Consensus 332 --------~-~-~~~~l~~~i~~l~~ 347 (390)
. . +.+++++++++++.
T Consensus 418 ~~~~~~~~~~~v~~eev~~~v~~~m~ 443 (491)
T PLN02534 418 RWGDEERVGVLVKKDEVEKAVKTLMD 443 (491)
T ss_pred cccccccccCccCHHHHHHHHHHHhc
Confidence 0 2 68899999999996
|
|
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.046 Score=46.33 Aligned_cols=103 Identities=14% Similarity=0.105 Sum_probs=60.8
Q ss_pred CCCeEEEEeecccccCCHHH--HHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEe
Q psy12587 192 KEDIVFLSINRYERKKNLEL--AIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFL 269 (390)
Q Consensus 192 ~~~~~i~~~g~~~~~K~~~~--ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~ 269 (390)
+++.+++..|.-.+.|.+.. ..+.+..+.+.+ ..++++|+.... -.+...+..+... .+.+.+.
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~-------~~vvl~g~~~~~------~~~~~~~~~~~~~-~~~~~~~ 169 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG-------YRVVLLGGPEEQ------EKEIADQIAAGLQ-NPVINLA 169 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT--------EEEE--SSHHH------HHHHHHHHHTTHT-TTTEEET
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC-------ceEEEEccchHH------HHHHHHHHHHhcc-cceEeec
Confidence 46778888887777776544 777777776652 567788866420 0022223333221 1367888
Q ss_pred cCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEe
Q psy12587 270 TSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAV 313 (390)
Q Consensus 270 g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~ 313 (390)
|..+-.|+..+++.||++|.+-. |..-+ |.|.|+|+|+-
T Consensus 170 ~~~~l~e~~ali~~a~~~I~~Dt----g~~Hl-A~a~~~p~v~l 208 (247)
T PF01075_consen 170 GKTSLRELAALISRADLVIGNDT----GPMHL-AAALGTPTVAL 208 (247)
T ss_dssp TTS-HHHHHHHHHTSSEEEEESS----HHHHH-HHHTT--EEEE
T ss_pred CCCCHHHHHHHHhcCCEEEecCC----hHHHH-HHHHhCCEEEE
Confidence 98999999999999999997642 33334 88999999994
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.14 Score=40.39 Aligned_cols=80 Identities=19% Similarity=0.303 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCEEEEcccccchhH---HHhh------cccEEEEeecCCccccchhhhhhhhcccchh
Q psy12587 56 ALCMYLRMIVIALYVAWYSEKPDLVFCDLVSICIPI---LQAK------QFKVLFYCHYPDQLLSKQGSFLKSIYRFPLN 126 (390)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~---~~~~------~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~ 126 (390)
.....+..+...+.. +.+.+||+|+++++..++++ +++. +.++|+.--. ... ...+..
T Consensus 73 ~~~~~l~~~~~~~~i-l~r~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES~-aRv--~~lSlT--------- 139 (170)
T PF08660_consen 73 SIFTTLRAFLQSLRI-LRRERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIESF-ARV--KTLSLT--------- 139 (170)
T ss_pred hHHHHHHHHHHHHHH-HHHhCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEee-eec--CCCchH---------
Confidence 344444444333333 33489999999998776654 3444 4666654321 110 001111
Q ss_pred hHHHHHhcCcceEEEccHhHHHHH
Q psy12587 127 KLEEWTTCKADKIVVNSEFTKSVV 150 (390)
Q Consensus 127 ~~~~~~~~~ad~ii~~s~~~~~~~ 150 (390)
-+.++..||.+++..+.+++.+
T Consensus 140 --Gklly~~aD~f~VQW~~l~~~y 161 (170)
T PF08660_consen 140 --GKLLYPFADRFIVQWEELAEKY 161 (170)
T ss_pred --HHHHHHhCCEEEEcCHHHHhHC
Confidence 1334556999999998777643
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.16 Score=45.43 Aligned_cols=103 Identities=11% Similarity=0.077 Sum_probs=66.0
Q ss_pred CCeEEEEeecccccCCH--HHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEec
Q psy12587 193 EDIVFLSINRYERKKNL--ELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLT 270 (390)
Q Consensus 193 ~~~~i~~~g~~~~~K~~--~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g 270 (390)
++.+++..|.-.+.|.+ +...+.++.+.++ +..++++|+.... +. +..++..+..+-+..+.+.|
T Consensus 181 ~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~-------~~~ivl~g~p~~~---e~---~~~~~i~~~~~~~~~~~l~g 247 (344)
T TIGR02201 181 QNYIVIQPTSRWFFKCWDNDRFSALIDALHAR-------GYEVVLTSGPDKD---EL---AMVNEIAQGCQTPRVTSLAG 247 (344)
T ss_pred CCEEEEeCCCCccccCCCHHHHHHHHHHHHhC-------CCeEEEecCCCHH---HH---HHHHHHHhhCCCCcccccCC
Confidence 45666777765566644 5667777777553 2678888864321 00 12333333333223456789
Q ss_pred CCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEe
Q psy12587 271 SPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAV 313 (390)
Q Consensus 271 ~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~ 313 (390)
..+=.|+..+++.||++|..- .|..=+ |.|.|+|+|+-
T Consensus 248 ~~sL~el~ali~~a~l~Vs~D----SGp~Hl-AaA~g~p~v~L 285 (344)
T TIGR02201 248 KLTLPQLAALIDHARLFIGVD----SVPMHM-AAALGTPLVAL 285 (344)
T ss_pred CCCHHHHHHHHHhCCEEEecC----CHHHHH-HHHcCCCEEEE
Confidence 889999999999999999753 233333 88999999983
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.16 Score=45.18 Aligned_cols=100 Identities=17% Similarity=0.132 Sum_probs=71.0
Q ss_pred CCeEEEEee-cccccCCHH--HHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEe
Q psy12587 193 EDIVFLSIN-RYERKKNLE--LAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFL 269 (390)
Q Consensus 193 ~~~~i~~~g-~~~~~K~~~--~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~ 269 (390)
.+.+++..| +....|.+. ...+.+..+.+++ .+++++|+..+. +..+++.+.++ ..+.+.
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~-------~~Vvl~g~~~e~--------e~~~~i~~~~~--~~~~l~ 237 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKG-------YQVVLFGGPDEE--------ERAEEIAKGLP--NAVILA 237 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCC-------CEEEEecChHHH--------HHHHHHHHhcC--CccccC
Confidence 367777788 555666654 6777777777763 678888877432 44555555553 223388
Q ss_pred cCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEec
Q psy12587 270 TSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVN 314 (390)
Q Consensus 270 g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~ 314 (390)
|..+-.|+..+++.||++|.+. .|..-+ |.|.|+|+|+--
T Consensus 238 ~k~sL~e~~~li~~a~l~I~~D----Sg~~Hl-AaA~~~P~I~iy 277 (334)
T COG0859 238 GKTSLEELAALIAGADLVIGND----SGPMHL-AAALGTPTIALY 277 (334)
T ss_pred CCCCHHHHHHHHhcCCEEEccC----ChHHHH-HHHcCCCEEEEE
Confidence 9999999999999999999765 244445 889999999944
|
|
| >COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.14 E-value=2 Score=39.01 Aligned_cols=221 Identities=13% Similarity=0.101 Sum_probs=119.0
Q ss_pred hcCcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccc----hhhhcCCCCCCCCeEEEEeecccccC-
Q psy12587 133 TCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEP----IENVLNPLPGKEDIVFLSINRYERKK- 207 (390)
Q Consensus 133 ~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~i~~~g~~~~~K- 207 (390)
..+.|.+++.+......+.+.++.. .+++.....|-+...+....... ....+. ++. ++.+|+|.-.+++..
T Consensus 146 ~~~~dy~~~~~~~~~~if~~~f~~~-~~~i~~~G~Pr~D~~~~~~~~~~~~~~~~~~~~-~~~-~k~vIlyaPTfr~~~~ 222 (388)
T COG1887 146 RNHWDYLISPNPESTAIFAEAFNID-KENILETGYPRNDKLFDEAGKTEDILLIQLALP-LPQ-DKKVILYAPTFRDNDV 222 (388)
T ss_pred eeeeeeeeeCChhhHHHHHHHhccc-ccceeecCcccchhhhhhccchhhhHHHhhhcC-Ccc-cCceEEecCCccCCcc
Confidence 4567889999988888877776633 45566555554333333221111 111221 233 578889998887765
Q ss_pred --C---HHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHH
Q psy12587 208 --N---LELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFK 282 (390)
Q Consensus 208 --~---~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~ 282 (390)
+ ....++..+.......+ +..+++-=..... +.+...- ...+.+.... +..++.++|.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~l~~~----~~~ii~k~Hp~is--------~~~~~~~---~~~~~~~~vs--~~~di~dll~ 285 (388)
T COG1887 223 LIGTQFFNLDIDIEKLKEKLGEN----EYVIIVKPHPLIS--------DKIDKRY---ALDDFVLDVS--DNADINDLLL 285 (388)
T ss_pred ccchhhhhhhhhHHHHHHhhccC----CeEEEEecChhhh--------hhhhhhh---hccceeEecc--cchhHHHHHh
Confidence 2 22223222222222211 3555554322111 1111110 1122233322 2478899999
Q ss_pred hcceEEeCCCCCCCCccHHhhhhcCCCEEEecC--CC---cccce---ecCcceeeecCCHHHHHHHHHHHhcCChhHHH
Q psy12587 283 FCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS--GG---PKESV---VDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQ 354 (390)
Q Consensus 283 ~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~--~~---~~e~i---~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~ 354 (390)
.+|++|.- ++.+++|+|...+|||..-. .. .+.+. .....|-++. +.+++.++|.....+++ ...
T Consensus 286 ~sDiLITD-----ySSv~fdf~~l~KPiify~~D~~~y~~~rg~~~d~~~~~Pg~~~~-~~~~li~ai~~~~~~~~-~~~ 358 (388)
T COG1887 286 VSDILITD-----YSSVIFDFMLLDKPIIFYTYDLEQYDELRGFYLDYKFEAPGEVVE-TQEELIDAIKPYDEDGN-YDL 358 (388)
T ss_pred hhCEEEee-----chHHHHHHHHhcCcEEEEecChHHHHhhhhhhhhHHhcCCccccc-cHHHHHHHHHhhhcccc-hhH
Confidence 99999952 46789999999999998432 11 11111 2233566776 88999999999988666 333
Q ss_pred HHHHHHHHHHhhhcCHHHHHHHHHHHH
Q psy12587 355 QFSQFGFNRFNEKFSFQAFSIQLNTIV 381 (390)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
+..+...+.+ ..+.-....+++.+.+
T Consensus 359 ~k~~~~~~~~-~~~~dg~ss~ri~~~i 384 (388)
T COG1887 359 EKLRVFNDKF-NSYEDGRSSERILKLI 384 (388)
T ss_pred HHHHHHHHhh-cccccccHHHHHHHHH
Confidence 3333333333 2333344555555443
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.24 Score=42.62 Aligned_cols=104 Identities=19% Similarity=0.205 Sum_probs=60.4
Q ss_pred CCeEEEEeeccccc-------CCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHc-CCCC
Q psy12587 193 EDIVFLSINRYERK-------KNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKL-KLSD 264 (390)
Q Consensus 193 ~~~~i~~~g~~~~~-------K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~-~l~~ 264 (390)
++..++++...... .....+++.+..+.+..|+ ..++|--........ . . ....+. +...
T Consensus 116 ~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~-----~~lvvK~HP~~~~~~--~--~---~~~~~~~~~~~ 183 (269)
T PF05159_consen 116 NKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPD-----AKLVVKPHPDERGGN--K--Y---SYLEELPNLPN 183 (269)
T ss_pred CCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCC-----CEEEEEECchhhCCC--C--h---hHhhhhhcCCC
Confidence 34444555555433 2456677888888777775 777664432111000 0 1 112221 2233
Q ss_pred cEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCC
Q psy12587 265 NVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSG 316 (390)
Q Consensus 265 ~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~ 316 (390)
.+.+....+ +.+++..||.++.-+ +.+-+||+.+|+||++....
T Consensus 184 ~~~~~~~~~---~~~Ll~~s~~Vvtin-----StvGlEAll~gkpVi~~G~~ 227 (269)
T PF05159_consen 184 VVIIDDDVN---LYELLEQSDAVVTIN-----STVGLEALLHGKPVIVFGRA 227 (269)
T ss_pred eEEECCCCC---HHHHHHhCCEEEEEC-----CHHHHHHHHcCCceEEecCc
Confidence 344433343 357999999888644 57889999999999997544
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >KOG1192|consensus | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.67 Score=43.87 Aligned_cols=93 Identities=15% Similarity=0.202 Sum_probs=54.4
Q ss_pred CcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecC----CCcccc-eecCcceeeecC--CHH
Q psy12587 264 DNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS----GGPKES-VVDGRTGFLCES--NEE 336 (390)
Q Consensus 264 ~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~----~~~~e~-i~~~~~g~~~~~--~~~ 336 (390)
.+|...+++|+.++. +....+..+-+ .-|+ .+++|++.+|+|+|+.+. .-.... .+.+..++.... +..
T Consensus 335 ~nV~~~~W~PQ~~ll--l~H~~v~~FvT-HgG~-nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~~ 410 (496)
T KOG1192|consen 335 GNVVLSKWAPQNDLL--LDHPAVGGFVT-HGGW-NSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLVSE 410 (496)
T ss_pred CceEEecCCCcHHHh--cCCCcCcEEEE-CCcc-cHHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcCcH
Confidence 578888999998754 22222222212 2222 356999999999997443 222333 344444444433 334
Q ss_pred HHHHHHHHHhcCChhHHHHHHHHHH
Q psy12587 337 AFAKAMKKIVDNDGNIIQQFSQFGF 361 (390)
Q Consensus 337 ~l~~~i~~l~~~~~~~~~~~~~~~~ 361 (390)
.+.+++..++++++ ..+...+-+.
T Consensus 411 ~~~~~~~~il~~~~-y~~~~~~l~~ 434 (496)
T KOG1192|consen 411 ELLEAIKEILENEE-YKEAAKRLSE 434 (496)
T ss_pred HHHHHHHHHHcChH-HHHHHHHHHH
Confidence 48888889888877 5444444333
|
|
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.28 Score=43.95 Aligned_cols=101 Identities=15% Similarity=0.135 Sum_probs=65.3
Q ss_pred CCCeEEEEeecc-cccCCH--HHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCC---Cc
Q psy12587 192 KEDIVFLSINRY-ERKKNL--ELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLS---DN 265 (390)
Q Consensus 192 ~~~~~i~~~g~~-~~~K~~--~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~---~~ 265 (390)
+++++++..|.- .+.|.+ +.+.+.++.+.+. ++.+++.|+..+. +..++..+..+-+ ..
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~-------~~~vvl~Gg~~e~--------~~~~~i~~~~~~~~~~~~ 243 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDE-------GYQVVLFGSAKDH--------EAGNEILAALNTEQQAWC 243 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHC-------CCeEEEEeCHHhH--------HHHHHHHHhcccccccce
Confidence 356677777763 356654 3566777666543 2778888865543 3334444333211 12
Q ss_pred EEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEE
Q psy12587 266 VLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIA 312 (390)
Q Consensus 266 v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~ 312 (390)
+.+.|..+=.|+..+++.||++|..- .|..=+ |.|.|+|+|+
T Consensus 244 ~~l~g~~sL~el~ali~~a~l~I~nD----TGp~Hl-AaA~g~P~va 285 (348)
T PRK10916 244 RNLAGETQLEQAVILIAACKAIVTND----SGLMHV-AAALNRPLVA 285 (348)
T ss_pred eeccCCCCHHHHHHHHHhCCEEEecC----ChHHHH-HHHhCCCEEE
Confidence 56678888899999999999999654 233334 8899999998
|
|
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.055 Score=38.18 Aligned_cols=81 Identities=16% Similarity=0.089 Sum_probs=53.2
Q ss_pred EEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEE--ecCCChHH--HHHHHHhcceEEeCCCCCCCCc---cHHhhhh
Q psy12587 233 LVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLF--LTSPSDAA--KISLFKFCHCIIYTPSNEHFGI---VPIEAMF 305 (390)
Q Consensus 233 l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~--~g~~~~~e--~~~~~~~adv~v~ps~~e~~~~---~~~Ea~a 305 (390)
+.|+|+-+. +...+++.++++|.. .+.+ .+.....+ +...+..||++|++...-+-.. +--+|-.
T Consensus 2 vliVGG~~~-------~~~~~~~~~~~~G~~-~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk 73 (97)
T PF10087_consen 2 VLIVGGRED-------RERRYKRILEKYGGK-LIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKK 73 (97)
T ss_pred EEEEcCCcc-------cHHHHHHHHHHcCCE-EEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHH
Confidence 567787332 128899999999863 3333 13344444 8899999999998865433222 3346777
Q ss_pred cCCCEEEecCCCcccc
Q psy12587 306 CKRPVIAVNSGGPKES 321 (390)
Q Consensus 306 ~G~pvi~~~~~~~~e~ 321 (390)
.|+|++.++..+...+
T Consensus 74 ~~ip~~~~~~~~~~~l 89 (97)
T PF10087_consen 74 YGIPIIYSRSRGVSSL 89 (97)
T ss_pred cCCcEEEECCCCHHHH
Confidence 8999999986655443
|
|
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.2 Score=33.78 Aligned_cols=66 Identities=17% Similarity=0.105 Sum_probs=41.3
Q ss_pred CCCcceEEeccc--cccccchhhHHHHHHHHHHHHHHHHHHhhcCCCEEEEcccccch-----hHHHhhcccEEEEeecC
Q psy12587 34 DGTLPVKVIGDW--LPRNIFGKFYALCMYLRMIVIALYVAWYSEKPDLVFCDLVSICI-----PILQAKQFKVLFYCHYP 106 (390)
Q Consensus 34 ~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~-----~~~~~~~~~~v~~~h~~ 106 (390)
.++++|.+++.. .....++.+.....+++.+ +++++.||||.|...+.+ ..++..+.+.|++-|+.
T Consensus 13 tngLKVYYlP~~~~~~~~t~Pt~~~~~pl~R~I-------lirE~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfTDHSL 85 (90)
T PF08288_consen 13 TNGLKVYYLPLKVFYNQCTLPTLFGSFPLLRNI-------LIRERIDIVHGHQAFSTLCHEAILHARTMGLKTVFTDHSL 85 (90)
T ss_pred CCCeEEEeecchhhhcCcchHHHHHhhHHHHHH-------HHHcCeeEEEeehhhhHHHHHHHHHHHhCCCcEEeecccc
Confidence 455677776532 2233344444444555543 445999999999965433 44556669999999974
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.084 Score=46.25 Aligned_cols=68 Identities=10% Similarity=0.083 Sum_probs=48.8
Q ss_pred HHHHHHHHhcceEEeCCCCCCCCccHHhhhhcC-CCEEEecC--CCcccceecCcceeeecC-CHHHHHHHH
Q psy12587 275 AAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCK-RPVIAVNS--GGPKESVVDGRTGFLCES-NEEAFAKAM 342 (390)
Q Consensus 275 ~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G-~pvi~~~~--~~~~e~i~~~~~g~~~~~-~~~~l~~~i 342 (390)
.+..+.|++|..+++|.-...+..-++|||++| +|||.++. -...+++.-....+.++. +..++.+.+
T Consensus 228 ~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL 299 (302)
T PF03016_consen 228 SEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEIL 299 (302)
T ss_pred hHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHH
Confidence 446789999999999776656788899999999 57777663 456667755556666765 555544444
|
Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane |
| >PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.39 Score=41.07 Aligned_cols=75 Identities=13% Similarity=0.045 Sum_probs=49.6
Q ss_pred cCCCEEEEccccc-chhHHHh---hcccEEEEeecCCccccch----------hhhhhhhcccchhhHHHHHhcCcceEE
Q psy12587 75 EKPDLVFCDLVSI-CIPILQA---KQFKVLFYCHYPDQLLSKQ----------GSFLKSIYRFPLNKLEEWTTCKADKIV 140 (390)
Q Consensus 75 ~~~Dvi~~~~~~~-~~~~~~~---~~~~~v~~~h~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ad~ii 140 (390)
-+.||+|+.+... +++.+.. .+.|+++|-|+...-.... ....+.+...++..+.+.+++.||.|+
T Consensus 171 P~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~Ad~I~ 250 (268)
T PF11997_consen 171 PKADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRAADRIT 250 (268)
T ss_pred CCCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhCeec
Confidence 6779999988543 3333222 2399999999864321110 233455555566677788899999999
Q ss_pred EccHhHHHH
Q psy12587 141 VNSEFTKSV 149 (390)
Q Consensus 141 ~~s~~~~~~ 149 (390)
+.++..+..
T Consensus 251 ~l~~~n~~~ 259 (268)
T PF11997_consen 251 PLYEYNREW 259 (268)
T ss_pred ccchhhHHH
Confidence 999975543
|
It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY. |
| >PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides | Back alignment and domain information |
|---|
Probab=92.97 E-value=0.66 Score=37.23 Aligned_cols=84 Identities=13% Similarity=0.095 Sum_probs=40.1
Q ss_pred cCCCEEEEcccccc---hhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHH
Q psy12587 75 EKPDLVFCDLVSIC---IPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQ 151 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~---~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 151 (390)
.+||+++....... +..++..++|+++.---.. ....++ +++ +..+.+.+++..|.|.+.|+..++.+.
T Consensus 94 ~~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls------~~s~~~-~~~-~~~~~r~~l~~f~~i~aqs~~da~r~~ 165 (186)
T PF04413_consen 94 WRPDLLIWVETELWPNLLREAKRRGIPVVLVNARLS------ERSFRR-YRR-FPFLFRPLLSRFDRILAQSEADAERFR 165 (186)
T ss_dssp H--SEEEEES----HHHHHH-----S-EEEEEE----------------------HHHHHHGGG-SEEEESSHHHHHHHH
T ss_pred hCCCEEEEEccccCHHHHHHHhhcCCCEEEEeeeec------cccchh-hhh-hHHHHHHHHHhCCEEEECCHHHHHHHH
Confidence 79999988774332 2333334478776432111 001111 111 245667888999999999999999999
Q ss_pred HHhccCCCCceeecCCC
Q psy12587 152 ATFRSLDHKCLDILYPS 168 (390)
Q Consensus 152 ~~~~~~~~~~~~vi~~~ 168 (390)
+. +.+++++.+.+|-
T Consensus 166 ~l--G~~~~~v~v~Gnl 180 (186)
T PF04413_consen 166 KL--GAPPERVHVTGNL 180 (186)
T ss_dssp TT--T-S--SEEE---G
T ss_pred Hc--CCCcceEEEeCcc
Confidence 97 5556789998873
|
Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B. |
| >PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes | Back alignment and domain information |
|---|
Probab=92.89 E-value=0.52 Score=36.38 Aligned_cols=77 Identities=16% Similarity=0.197 Sum_probs=44.9
Q ss_pred cCCCEEEEccccc--chhHH--HhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHH
Q psy12587 75 EKPDLVFCDLVSI--CIPIL--QAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVV 150 (390)
Q Consensus 75 ~~~Dvi~~~~~~~--~~~~~--~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 150 (390)
..+|+|++++--. .+..+ .+.++|.++++|.....+.......+.. -..+..-...--||.|+++|.+.++.+
T Consensus 58 ~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl~YP~~~~~~rd~---~~~~~ni~saLaAD~v~FNS~~nr~sF 134 (168)
T PF12038_consen 58 HSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQLAYPVSPGQERDF---QYGMNNIYSALAADRVVFNSAFNRDSF 134 (168)
T ss_pred cCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcccCCCCCCccccc---cHHHHHHHHHHhceeeeecchhhHHHH
Confidence 7789999998321 22211 2233999999996433222111111111 112333344557999999999999988
Q ss_pred HHHh
Q psy12587 151 QATF 154 (390)
Q Consensus 151 ~~~~ 154 (390)
.+-.
T Consensus 135 L~~~ 138 (168)
T PF12038_consen 135 LDGI 138 (168)
T ss_pred HHHH
Confidence 7643
|
It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important. |
| >PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis | Back alignment and domain information |
|---|
Probab=92.81 E-value=0.45 Score=34.65 Aligned_cols=96 Identities=13% Similarity=0.171 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHcCCCCcEEEecCCChH------------------------------HHHHHHHhcceEEeCC--CCCC
Q psy12587 248 EYYKELGVLVKKLKLSDNVLFLTSPSDA------------------------------AKISLFKFCHCIIYTP--SNEH 295 (390)
Q Consensus 248 ~y~~~~~~~~~~~~l~~~v~~~g~~~~~------------------------------e~~~~~~~adv~v~ps--~~e~ 295 (390)
++.+++++-++..+|+ |.|.+++++. ....++..||++|.-- .+-.
T Consensus 9 dWRe~I~~ga~~~~L~--v~F~~PvtdH~~SD~~G~~iLG~e~~~fw~D~k~a~iN~iRT~~li~~aDvVVvrFGekYKQ 86 (141)
T PF11071_consen 9 DWREEIKEGAKAAGLP--VEFTSPVTDHEASDDCGVDILGEEPNKFWRDHKGAKINAIRTRTLIEKADVVVVRFGEKYKQ 86 (141)
T ss_pred hHHHHHHHHHHHcCCC--eEEecCCCCchhhhhhhHHHhCCCCccccccchhhhhhHHHHHHHHhhCCEEEEEechHHHH
Confidence 4556666666666653 5666655432 2356788899887631 1111
Q ss_pred CCcc--HHhhhhcCCCEEEecCCCcccceecCcc--eeeecCCHHHHHHHHHHHh
Q psy12587 296 FGIV--PIEAMFCKRPVIAVNSGGPKESVVDGRT--GFLCESNEEAFAKAMKKIV 346 (390)
Q Consensus 296 ~~~~--~~Ea~a~G~pvi~~~~~~~~e~i~~~~~--g~~~~~~~~~l~~~i~~l~ 346 (390)
+... .-=|.|.|+|.|+-.......-+++-.+ -.++. +++...+.+..++
T Consensus 87 WNaAfDAg~a~AlgKplI~lh~~~~~HpLKEvda~A~a~~e-t~~Qvv~iL~Yv~ 140 (141)
T PF11071_consen 87 WNAAFDAGYAAALGKPLITLHPEELHHPLKEVDAAALAVAE-TPEQVVEILRYVL 140 (141)
T ss_pred HHHHhhHHHHHHcCCCeEEecchhccccHHHHhHhhHhhhC-CHHHHHHHHHHHh
Confidence 2111 2236789999999665443333322122 22233 7788877777654
|
This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship. |
| >KOG1021|consensus | Back alignment and domain information |
|---|
Probab=91.69 E-value=3.9 Score=38.22 Aligned_cols=92 Identities=10% Similarity=0.066 Sum_probs=60.6
Q ss_pred HHHHHHHHhcceEEeCCCCCCCCccHHhhhhcC-CCEEEecC--CCcccceecCcceeeecCCHHHHHHHHHHHh-cCCh
Q psy12587 275 AAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCK-RPVIAVNS--GGPKESVVDGRTGFLCESNEEAFAKAMKKIV-DNDG 350 (390)
Q Consensus 275 ~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G-~pvi~~~~--~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~-~~~~ 350 (390)
....+.|+.|..+++|.-.+...-.++||+..| +|||.+|. ....+.++-..-++.++ .+++-+.|.+.| +-+.
T Consensus 335 ~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~--~~~v~~~~~~iL~~i~~ 412 (464)
T KOG1021|consen 335 LNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVP--EKDVPELIKNILLSIPE 412 (464)
T ss_pred chHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEE--HHHhhhHHHHHHHhcCH
Confidence 455689999999999998887888999999999 68888886 34455555455555565 344444434443 3344
Q ss_pred hHHHHHHHHHHHHHhhhc
Q psy12587 351 NIIQQFSQFGFNRFNEKF 368 (390)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~ 368 (390)
+....|.++....+.+.|
T Consensus 413 ~~~~~m~~~v~~~v~r~~ 430 (464)
T KOG1021|consen 413 EEVLRMRENVIRLVPRHF 430 (464)
T ss_pred HHHHHHHHHHHHHHHhhE
Confidence 355666666654443444
|
|
| >TIGR03646 YtoQ_fam YtoQ family protein | Back alignment and domain information |
|---|
Probab=91.64 E-value=0.93 Score=33.12 Aligned_cols=96 Identities=15% Similarity=0.160 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHcCCCCcEEEecCCChH------------------------------HHHHHHHhcceEEeCC--CCCC
Q psy12587 248 EYYKELGVLVKKLKLSDNVLFLTSPSDA------------------------------AKISLFKFCHCIIYTP--SNEH 295 (390)
Q Consensus 248 ~y~~~~~~~~~~~~l~~~v~~~g~~~~~------------------------------e~~~~~~~adv~v~ps--~~e~ 295 (390)
++.+++++-+++.+|+ |.|.+++++. ....++..||++|.-- .+-.
T Consensus 12 dWRe~I~~ga~~~~L~--v~F~~pvtdH~aSD~~G~~iLG~e~~~fw~D~k~a~iNaiRT~~li~~aDvvVvrFGekYKQ 89 (144)
T TIGR03646 12 DWREEIKEGAKSKNLP--IVFSGPVTDHEASDNIGEDILGKQPSNFWRDDAAASINNIRTRKLIEKADVVIALFGEKYKQ 89 (144)
T ss_pred hHHHHHHHHHHHcCCC--eEEecCCCCCcchhhhhHHHhCCCCccccccccccchhhHHHHHHHhhCCEEEEEechHHHH
Confidence 5557777777777663 6666665432 2356788899887631 1111
Q ss_pred CCcc--HHhhhhcCCCEEEecCCCcccceecCcce--eeecCCHHHHHHHHHHHh
Q psy12587 296 FGIV--PIEAMFCKRPVIAVNSGGPKESVVDGRTG--FLCESNEEAFAKAMKKIV 346 (390)
Q Consensus 296 ~~~~--~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g--~~~~~~~~~l~~~i~~l~ 346 (390)
+... .-=|.|.|+|.|+-.......-+++-.+. .++. +++...+.+..++
T Consensus 90 WNaAfDAg~aaAlgKplI~lh~~~~~HpLKEvdaaA~avae-tp~Qvv~iL~Yv~ 143 (144)
T TIGR03646 90 WNAAFDAGYAAALGKPLIILRPEELIHPLKEVDNKAQAVVE-TPEQAIETLKYIL 143 (144)
T ss_pred HHHHhhHHHHHHcCCCeEEecchhccccHHHHhHHHHHHhc-CHHHHHHHHHHhh
Confidence 2111 22367899999996544333322221111 1222 6777777666543
|
Members of this family are uncharacterized proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship. |
| >KOG0780|consensus | Back alignment and domain information |
|---|
Probab=89.21 E-value=16 Score=32.76 Aligned_cols=170 Identities=13% Similarity=0.242 Sum_probs=99.0
Q ss_pred EEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecC--CC
Q psy12587 196 VFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTS--PS 273 (390)
Q Consensus 196 ~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~--~~ 273 (390)
.+=|.|+....+-.....+...+.+++ ++.++|+-.. .+...+...++++.+..+..+ |++|.|.=. +-
T Consensus 156 ~iP~ygsyte~dpv~ia~egv~~fKke-------~fdvIIvDTS-GRh~qe~sLfeEM~~v~~ai~-Pd~vi~VmDasiG 226 (483)
T KOG0780|consen 156 RVPFYGSYTEADPVKIASEGVDRFKKE-------NFDVIIVDTS-GRHKQEASLFEEMKQVSKAIK-PDEIIFVMDASIG 226 (483)
T ss_pred CCeeEecccccchHHHHHHHHHHHHhc-------CCcEEEEeCC-CchhhhHHHHHHHHHHHhhcC-CCeEEEEEecccc
Confidence 344556777778888888999998887 4667777532 222234566688888877777 567766321 21
Q ss_pred ---hHHHHHHHHhcce--EEeCCC----CCCCCccHHhhhhcCCCEEEecCCCcccceecCcc----eeeecC-CHHHHH
Q psy12587 274 ---DAAKISLFKFCHC--IIYTPS----NEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRT----GFLCES-NEEAFA 339 (390)
Q Consensus 274 ---~~e~~~~~~~adv--~v~ps~----~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~----g~~~~~-~~~~l~ 339 (390)
.++...+=...|+ +|++-. ..|..++.. .+.++||+--..|..-+-++.... +-++-- |.+.|.
T Consensus 227 Qaae~Qa~aFk~~vdvg~vIlTKlDGhakGGgAlSaV--aaTksPIiFIGtGEhmdDlE~F~pk~FvsrlLGmGDi~glv 304 (483)
T KOG0780|consen 227 QAAEAQARAFKETVDVGAVILTKLDGHAKGGGALSAV--AATKSPIIFIGTGEHMDDLEPFDPKPFVSRLLGMGDIEGLV 304 (483)
T ss_pred HhHHHHHHHHHHhhccceEEEEecccCCCCCceeeeh--hhhCCCEEEEecCccccccCCCChHHHHHHHhccccHHHHH
Confidence 2222222333454 333321 122233444 357899998777655444433222 223333 889999
Q ss_pred HHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q psy12587 340 KAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVN 382 (390)
Q Consensus 340 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
+.+.++..+.. +++-++- -.-+|+...+.+++..+.+
T Consensus 305 ek~~ev~~~d~---~el~~kl---~~gkFtlrd~y~Qfq~imk 341 (483)
T KOG0780|consen 305 EKVQEVGKDDA---KELVEKL---KQGKFTLRDFYDQFQNIMK 341 (483)
T ss_pred HHHHHHhhhhH---HHHHHHH---HhCCccHHHHHHHHHHHHh
Confidence 99999872222 2222222 1358999998888887764
|
|
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=87.01 E-value=5.8 Score=34.08 Aligned_cols=205 Identities=16% Similarity=0.146 Sum_probs=109.8
Q ss_pred HHHhcCcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecc--cccC
Q psy12587 130 EWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRY--ERKK 207 (390)
Q Consensus 130 ~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~--~~~K 207 (390)
...-++|-.++.-...+.+.+.+. + -+...+.|+.-. -.++.+... +.+ ......+-+..|+- +...
T Consensus 173 lm~~rrc~~vf~rD~~Taq~L~~r--g---vna~~vGnpmmD-~L~p~~~~~--q~l---~~g~~viaLLPGsR~pea~~ 241 (412)
T COG4370 173 LMLRRRCWAVFPRDALTAQHLANR--G---VNAAYVGNPMMD-GLPPPERDP--QLL---LTGVPVIALLPGSRVPEAQT 241 (412)
T ss_pred HHhcccceeeeccccccHHHHHhc--C---CchhhccChhhc-cCCCccCCc--hhh---ccCCceEEecCCCCChHHHh
Confidence 334567777887777777777764 2 355666665321 122211100 000 12233444555554 3467
Q ss_pred CHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCC--------CcEEEecCCChHHHHH
Q psy12587 208 NLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLS--------DNVLFLTSPSDAAKIS 279 (390)
Q Consensus 208 ~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~--------~~v~~~g~~~~~e~~~ 279 (390)
++..++.++..+.....+ +++.+..-+..+. .-+....++.|.. ++..+ ..+.+.+.+
T Consensus 242 nl~~il~slcal~~~~a~-------vvfw~ai~~~lpl-----~~l~~l~e~~gWq~~ad~~~kdnc~l--~lsqqsfad 307 (412)
T COG4370 242 NLAVILGSLCALPAMFAL-------VVFWAAIAPELPL-----LLLWTLEERQGWQPLADRFGKDNCSL--WLSQQSFAD 307 (412)
T ss_pred hHHHHHHHHhhhHHHHHH-------HHHHhccCcCCCH-----HHHHHHHHhcCcchhhhhhccCceEE--EEeHHHHHH
Confidence 888888877776654321 2222222111110 3344444444321 22222 356677788
Q ss_pred HHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcc---ccee-----cCcceeeecCCHHHHHHHHHHHhcCChh
Q psy12587 280 LFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPK---ESVV-----DGRTGFLCESNEEAFAKAMKKIVDNDGN 351 (390)
Q Consensus 280 ~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~---e~i~-----~~~~g~~~~~~~~~l~~~i~~l~~~~~~ 351 (390)
++..+|+.+-. -|...=.+...|+|||..+..|.. -+.+ -|..-.++.+++..-.....+++.|++
T Consensus 308 iLH~adaalgm-----AGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~~aq~a~~~~q~ll~dp~- 381 (412)
T COG4370 308 ILHAADAALGM-----AGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRPEAQAAAQAVQELLGDPQ- 381 (412)
T ss_pred HHHHHHHHHHh-----ccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCCchhhHHHHHHHHhcChH-
Confidence 99999986532 255566788999999997753321 1110 022223344244444444445999999
Q ss_pred HHHHHHHHHHHHHh
Q psy12587 352 IIQQFSQFGFNRFN 365 (390)
Q Consensus 352 ~~~~~~~~~~~~~~ 365 (390)
....++.|+++.+-
T Consensus 382 r~~air~nGqrRiG 395 (412)
T COG4370 382 RLTAIRHNGQRRIG 395 (412)
T ss_pred HHHHHHhcchhhcc
Confidence 88888888887763
|
|
| >smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme | Back alignment and domain information |
|---|
Probab=85.08 E-value=9.1 Score=32.55 Aligned_cols=88 Identities=10% Similarity=0.073 Sum_probs=61.7
Q ss_pred CCccHHhhhhcCCCEEEecC---CCcccceecCcceeeecCCH--HHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCH
Q psy12587 296 FGIVPIEAMFCKRPVIAVNS---GGPKESVVDGRTGFLCESNE--EAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSF 370 (390)
Q Consensus 296 ~~~~~~Ea~a~G~pvi~~~~---~~~~e~i~~~~~g~~~~~~~--~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (390)
++..+.=-|+|+-.|+.... .-..+.+.....=+-+..|. +++.++|..+.++++ ..+++++++++.+.+..+.
T Consensus 157 ~S~rl~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYvPv~~d~sd~~l~~~i~~~~~~~~-~a~~Ia~~~~~~~~~~L~~ 235 (256)
T smart00672 157 WSVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCRELKEAVDWGNEHDK-KAQEIGKRGSEFIQQNLSM 235 (256)
T ss_pred chhhHHHHHhcCceEEEeCCchhHHHHhcccCccceEEeeCCCchhhHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHcCH
Confidence 33345556788877777653 22233333333322233343 449999999999999 9999999999999888999
Q ss_pred HHHHHHHHHHHHhh
Q psy12587 371 QAFSIQLNTIVNNM 384 (390)
Q Consensus 371 ~~~~~~~~~~~~~~ 384 (390)
+.+..-+..++.+-
T Consensus 236 ~~~~~Y~~~ll~ey 249 (256)
T smart00672 236 EDVYDYMFHLLQEY 249 (256)
T ss_pred HHHHHHHHHHHHHH
Confidence 99988888887654
|
|
| >COG5017 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=83.22 E-value=15 Score=27.50 Aligned_cols=56 Identities=16% Similarity=0.054 Sum_probs=41.7
Q ss_pred cEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecC-CCcccceec
Q psy12587 265 NVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS-GGPKESVVD 324 (390)
Q Consensus 265 ~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~-~~~~e~i~~ 324 (390)
...++|+-..+++.++...|.+++.-. .-.+++.++..++|.|.... .-+.|.+++
T Consensus 47 gl~v~~F~~~~kiQsli~darIVISHa----G~GSIL~~~rl~kplIv~pr~s~y~elvDd 103 (161)
T COG5017 47 GLRVYGFDKEEKIQSLIHDARIVISHA----GEGSILLLLRLDKPLIVVPRSSQYQELVDD 103 (161)
T ss_pred ccEEEeechHHHHHHHhhcceEEEecc----CcchHHHHhhcCCcEEEEECchhHHHhhhh
Confidence 367889999999999999999777421 22478889999999887554 445565544
|
|
| >KOG3349|consensus | Back alignment and domain information |
|---|
Probab=83.09 E-value=5.9 Score=30.11 Aligned_cols=99 Identities=14% Similarity=0.115 Sum_probs=58.3
Q ss_pred CeEEEEeecccccCCHHHHHHH------HHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEE
Q psy12587 194 DIVFLSINRYERKKNLELAIYS------LNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVL 267 (390)
Q Consensus 194 ~~~i~~~g~~~~~K~~~~ll~a------~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~ 267 (390)
..+|+.+|.-. ++.++.+ ...+.+++-. --++-+|.|..... +......+. ..+.
T Consensus 4 ~~vFVTVGtT~----Fd~LI~~Vl~~~~~~~L~k~G~~-----kLiiQ~Grg~~~~~------d~~~~~~k~----~gl~ 64 (170)
T KOG3349|consen 4 MTVFVTVGTTS----FDDLISCVLSEEFLQELQKRGFT-----KLIIQIGRGQPFFG------DPIDLIRKN----GGLT 64 (170)
T ss_pred eEEEEEecccc----HHHHHHHHcCHHHHHHHHHcCcc-----EEEEEecCCccCCC------CHHHhhccc----CCeE
Confidence 34678888744 6666644 3456665542 22344677743221 222222222 3344
Q ss_pred EecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecC
Q psy12587 268 FLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS 315 (390)
Q Consensus 268 ~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~ 315 (390)
+.++--...+.+.++.||+++.- +...+.+|-+..|+|.|+-.+
T Consensus 65 id~y~f~psl~e~I~~AdlVIsH----AGaGS~letL~l~KPlivVvN 108 (170)
T KOG3349|consen 65 IDGYDFSPSLTEDIRSADLVISH----AGAGSCLETLRLGKPLIVVVN 108 (170)
T ss_pred EEEEecCccHHHHHhhccEEEec----CCcchHHHHHHcCCCEEEEeC
Confidence 44443334456899999999942 234589999999999888543
|
|
| >PF12996 DUF3880: DUF based on E | Back alignment and domain information |
|---|
Probab=82.40 E-value=4.4 Score=27.17 Aligned_cols=65 Identities=11% Similarity=-0.058 Sum_probs=46.4
Q ss_pred HHhcCcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccc
Q psy12587 131 WTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYER 205 (390)
Q Consensus 131 ~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~ 205 (390)
.+....|.|++......+.+++. | .+++..+|-+.++..+.+....... ...-.--|.|+|++..
T Consensus 14 ~i~~~~~~iFt~D~~~~~~~~~~--G--~~~V~yLPLAa~~~~~~p~~~~~~~------~~~~~~dIsFVG~~y~ 78 (79)
T PF12996_consen 14 SIANSYDYIFTFDRSFVEEYRNL--G--AENVFYLPLAANPERFRPIPVDPEE------RKKYECDISFVGSLYP 78 (79)
T ss_pred hhCCCCCEEEEECHHHHHHHHHc--C--CCCEEEccccCCHHHhCcccCCccc------ccccCCCEEEeCcCcc
Confidence 44678899999999999988885 3 4799999999999988876432100 0113345788888653
|
rectale Gene description (DUF3880); InterPro: IPR024542 This entry represents proteins of unknown function. The Eubacterium rectale gene appears to be upregulated in the presence of Bacteroides thetaiotaomicron compared to growth in pure culture []. |
| >PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS | Back alignment and domain information |
|---|
Probab=82.22 E-value=7.3 Score=35.60 Aligned_cols=85 Identities=9% Similarity=0.016 Sum_probs=62.2
Q ss_pred cHHhhhhcCCCEEEecC---CCcccceecCcceeeecC--CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHH
Q psy12587 299 VPIEAMFCKRPVIAVNS---GGPKESVVDGRTGFLCES--NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAF 373 (390)
Q Consensus 299 ~~~Ea~a~G~pvi~~~~---~~~~e~i~~~~~g~~~~~--~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (390)
.+-=-|+||-.|+..+. .-..+.+.....-+-+.. +.+++.++|..+.++++ ..+++++++++++.+..+.+.+
T Consensus 229 RlkylL~c~SvVl~~~~~~~e~f~~~L~P~vHYVPV~~~~d~sdL~~~v~w~~~~~~-~A~~IA~~g~~f~~~~L~~~~~ 307 (395)
T PF05686_consen 229 RLKYLLACNSVVLKVKSPYYEFFYRALKPWVHYVPVKRDDDLSDLEEKVEWLNAHDD-EAQRIAENGQRFAREYLTMEDV 307 (395)
T ss_pred hHHHHHcCCceEEEeCCcHHHHHHhhhcccccEEEeccccchhhHHHHhhhcccChH-HHHHHHHHHHHHHHHHhhhhHH
Confidence 44445788888887543 122333444444344544 78999999999999998 9999999999999899999988
Q ss_pred HHHHHHHHHhh
Q psy12587 374 SIQLNTIVNNM 384 (390)
Q Consensus 374 ~~~~~~~~~~~ 384 (390)
..-+..++.+.
T Consensus 308 ~~Y~~~LL~eY 318 (395)
T PF05686_consen 308 YCYWRRLLLEY 318 (395)
T ss_pred HHHHHHHHHHH
Confidence 88887777654
|
This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence []. |
| >PRK00676 hemA glutamyl-tRNA reductase; Validated | Back alignment and domain information |
|---|
Probab=81.60 E-value=38 Score=30.13 Aligned_cols=136 Identities=9% Similarity=0.054 Sum_probs=72.2
Q ss_pred ceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCC----ChHHHH----HHHHhcceEEeCC--CCCCCCcc
Q psy12587 230 HVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSP----SDAAKI----SLFKFCHCIIYTP--SNEHFGIV 299 (390)
Q Consensus 230 ~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~----~~~e~~----~~~~~adv~v~ps--~~e~~~~~ 299 (390)
+-++.++|.|.-. ...-+...+.|. .+|.+.... +..++. .+...+|+++..| ..-..|..
T Consensus 174 ~k~vLvIGaGem~--------~l~a~~L~~~g~-~~i~v~nRt~~~~~~~~~~~~~~~~~~~~DvVIs~t~~Tas~~p~i 244 (338)
T PRK00676 174 KASLLFIGYSEIN--------RKVAYYLQRQGY-SRITFCSRQQLTLPYRTVVREELSFQDPYDVIFFGSSESAYAFPHL 244 (338)
T ss_pred CCEEEEEcccHHH--------HHHHHHHHHcCC-CEEEEEcCCccccchhhhhhhhhhcccCCCEEEEcCCcCCCCCcee
Confidence 4688888988542 444555555665 456555432 333332 6678999999853 33344555
Q ss_pred HHhhhhcCCCEEEecCCCcccce--ecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHH
Q psy12587 300 PIEAMFCKRPVIAVNSGGPKESV--VDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQL 377 (390)
Q Consensus 300 ~~Ea~a~G~pvi~~~~~~~~e~i--~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (390)
..|.+.--.+-+.-|..-.+++- ....+..++ |.+++.+.+.+-+. .|++....+...+ +..+.++
T Consensus 245 ~~~~~~~~~~r~~iDLAvPRdId~v~~~~~v~Ly--~iDdL~~i~~~n~~----~R~~~~~~ae~iI------~~~~~~~ 312 (338)
T PRK00676 245 SWESLADIPDRIVFDFNVPRTFPWSETPFPHRYL--DMDFISEWVQKHLQ----CRKEVNNKHKLSL------REAAYKQ 312 (338)
T ss_pred eHHHHhhccCcEEEEecCCCCCccccccCCcEEE--EhHHHHHHHHHHHH----HHHHHHHHHHHHH------HHHHHHH
Confidence 55554422223555554444432 112222233 67777666655322 4444444444444 4566677
Q ss_pred HHHHHhhhh
Q psy12587 378 NTIVNNMLD 386 (390)
Q Consensus 378 ~~~~~~~~~ 386 (390)
.+.|++-..
T Consensus 313 ~~~~~~~~~ 321 (338)
T PRK00676 313 WESYEKKLS 321 (338)
T ss_pred HHHHHHHHh
Confidence 777765443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 390 | ||||
| 2f9f_A | 177 | Crystal Structure Of The Putative Mannosyl Transfer | 2e-13 | ||
| 3c4q_A | 426 | Structure Of The Retaining Glycosyltransferase Msha | 2e-07 | ||
| 3c48_A | 438 | Structure Of The Retaining Glycosyltransferase Msha | 2e-07 | ||
| 2jjm_A | 394 | Crystal Structure Of A Family Gt4 Glycosyltransfera | 1e-06 | ||
| 3mbo_A | 414 | Crystal Structure Of The Glycosyltransferase Babsha | 2e-06 | ||
| 3s28_A | 816 | The Crystal Structure Of Sucrose Synthase-1 In Comp | 3e-06 | ||
| 3s27_A | 816 | The Crystal Structure Of Sucrose Synthase-1 From Ar | 2e-05 | ||
| 2r60_A | 499 | Structure Of Apo Sucrose Phosphate Synthase (Sps) O | 3e-05 | ||
| 2x6q_A | 416 | Crystal Structure Of Trehalose Synthase Tret From P | 1e-04 | ||
| 2xa1_A | 416 | Crystal Structure Of Trehalose Synthase Tret From P | 5e-04 | ||
| 2xmp_A | 416 | Crystal Structure Of Trehalose Synthase Tret Mutant | 6e-04 |
| >pdb|2F9F|A Chain A, Crystal Structure Of The Putative Mannosyl Transferase (Wbaz-1)from Archaeoglobus Fulgidus, Northeast Structural Genomics Target Gr29a Length = 177 | Back alignment and structure |
|
| >pdb|3C4Q|A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp Length = 426 | Back alignment and structure |
|
| >pdb|3C48|A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. Length = 438 | Back alignment and structure |
|
| >pdb|2JJM|A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. Length = 394 | Back alignment and structure |
|
| >pdb|3MBO|A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate Length = 414 | Back alignment and structure |
|
| >pdb|3S28|A Chain A, The Crystal Structure Of Sucrose Synthase-1 In Complex With A Breakdown Product Of The Udp-Glucose Length = 816 | Back alignment and structure |
|
| >pdb|3S27|A Chain A, The Crystal Structure Of Sucrose Synthase-1 From Arabidopsis Thaliana And Its Functional Implications. Length = 816 | Back alignment and structure |
|
| >pdb|2R60|A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii Length = 499 | Back alignment and structure |
|
| >pdb|2X6Q|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshi Length = 416 | Back alignment and structure |
|
| >pdb|2XA1|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshii (Seleno Derivative) Length = 416 | Back alignment and structure |
|
| >pdb|2XMP|A Chain A, Crystal Structure Of Trehalose Synthase Tret Mutant E326a From P.Horishiki In Complex With Udp Length = 416 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 161 bits (411), Expect = 1e-48
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 21/188 (11%)
Query: 181 PIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYD 240
P+E D +LS+NR +K +EL + L+ KL + G +
Sbjct: 11 PVETSKFKFKCYGDF-WLSVNRIYPEKRIELQLEVFKKLQ---------DEKLYIVGWFS 60
Query: 241 PHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVP 300
+ Y +++ + DNV FL S S+ I L+ C ++ T +E FG+ P
Sbjct: 61 KGD-HAERYARKIMKI-----APDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTP 114
Query: 301 IEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFG 360
IEAM +PVIAVN GG KE+V++ +TG+L ++ AMKK+ N +F +
Sbjct: 115 IEAMASGKPVIAVNEGGFKETVINEKTGYLVNADVNEIIDAMKKVSKNP----DKFKKDC 170
Query: 361 FNRFNEKF 368
F R ++F
Sbjct: 171 FRRA-KEF 177
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 129 bits (325), Expect = 8e-34
Identities = 54/315 (17%), Positives = 104/315 (33%), Gaps = 31/315 (9%)
Query: 60 YLRMIVIALYVAWYSEKPDLVFC-DLVSICIPILQAKQFKVLFYCHYPDQLLSKQGSFLK 118
YL + D V D + K+ L+ CH L
Sbjct: 111 YLNVNRENSKFIDL-SSFDYVLVHDPQPAALIEFYEKKSPWLWRCHID----------LS 159
Query: 119 SIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLE--K 176
S R L + I E+ + LD I+ PS+ + +
Sbjct: 160 SPNREFWEFLRRFVEKYDRYIFHLPEYVQP-------ELDRNKAVIMPPSIDPLSEKNVE 212
Query: 177 TTPEPIENVLNPL-PGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVV 235
I +L E + ++R++ K + I ++ ++ V+L++
Sbjct: 213 LKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPG-----VQLLL 267
Query: 236 AGGYDPHNIENVEYYKE-LGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNE 294
G + E Y+++ L + + + + + + I+ E
Sbjct: 268 VGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLI-GVHAREVNAFQRASDVILQMSIRE 326
Query: 295 HFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQ 354
FG+ EAM+ +PVI GG K +VDG TGFL + + + ++ + + +
Sbjct: 327 GFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVR-DANEAVEVVLYLLKHP-EVSK 384
Query: 355 QFSQFGFNRFNEKFS 369
+ R + F
Sbjct: 385 EMGAKAKERVRKNFI 399
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 2e-32
Identities = 51/277 (18%), Positives = 102/277 (36%), Gaps = 24/277 (8%)
Query: 116 FLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLE 175
LN L + ++D + S + + +K + +Y +
Sbjct: 137 ITVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETHELVK--PNKDIQTVYNFIDERVYF 194
Query: 176 KTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVV 235
K ++ + + + I+ + + K ++ + + + + + KL++
Sbjct: 195 KRDMTQLKKEYGISES--EKILIHISNFRKVKRVQDVVQAFAKIVTEV------DAKLLL 246
Query: 236 AG-GYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNE 294
G G + I LVK L + D VLFL + A++ ++ E
Sbjct: 247 VGDGPEFCTILQ---------LVKNLHIEDRVLFLGKQDNVAEL--LAMSDLMLLLSEKE 295
Query: 295 HFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNII 353
FG+V +EAM C P I GG E + G TG+LCE + A +++ ++ +
Sbjct: 296 SFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDE-ELH 354
Query: 354 QQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKKTK 390
+ + E+F + Q TI ++L
Sbjct: 355 RNMGERARESVYEQFRSEKIVSQYETIYYDVLRDDKN 391
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 3e-29
Identities = 45/227 (19%), Positives = 93/227 (40%), Gaps = 14/227 (6%)
Query: 128 LEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLN 187
E+ AD + VN++ + + + + + ++ P E E
Sbjct: 177 CEQQLVDNADVLAVNTQEEMQDLMHHYDADPDR-ISVVSPGADVELYSPGNDRATERSRR 235
Query: 188 PLPGKED---IVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNI 244
L + F+ R + K ++ I ++ +L R D ++++++ GG N
Sbjct: 236 ELGIPLHTKVVAFVG--RLQPFKGPQVLIKAVAALFDRDPD---RNLRVIICGGPSGPN- 289
Query: 245 ENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAM 304
+ ++L + + FL + +++++ + NE FG+V +EA
Sbjct: 290 ---ATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQ 346
Query: 305 FCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDG 350
PVIA GG +V +G TG L + + A+A A+ ++D+D
Sbjct: 347 ASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDE 393
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 4e-26
Identities = 41/226 (18%), Positives = 89/226 (39%), Gaps = 20/226 (8%)
Query: 129 EEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLE-KTTPEPIENVLN 187
+ K+ K+++ ++ + Q +++ + IL P +Y + + P E
Sbjct: 130 ATFEQGKSTKLMMLTDKQIADFQKHYQTEPER-FQILPPGIYPDRKYSEQIPNSREIYRQ 188
Query: 188 PLPGKED-IVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIEN 246
KE + L + +K ++ +I +L + L + ++ + L V G P
Sbjct: 189 KNGIKEQQNLLLQVGSDFGRKGVDRSIEAL----ASLPESLRHNTLLFVVGQDKP----- 239
Query: 247 VEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFC 306
++ L +KL + NV F + +D + L +++ E GIV +EA+
Sbjct: 240 -RKFEAL---AEKLGVRSNVHFFSGRNDVS--ELMAAADLLLHPAYQEAAGIVLLEAITA 293
Query: 307 KRPVIAVNSGGPKESVVDGRTGFLCES--NEEAFAKAMKKIVDNDG 350
PV+ G + D G + ++E + ++K +
Sbjct: 294 GLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSP 339
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 7e-26
Identities = 72/383 (18%), Positives = 120/383 (31%), Gaps = 68/383 (17%)
Query: 4 ATARLTITATAWGATGPRTTAHDHCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRM 63
+ + A+ A D TL +VI PR+ + L
Sbjct: 33 DPESIVVFASTQNAEEAHAY----------DKTLDYEVIR--WPRS---------VMLPT 71
Query: 64 IVIALYVAWY--SEKPDLVFC-DLVSICIPILQAKQF---KVLFYCHYPDQLLSKQGSFL 117
A +A + D V+ + + AKQ KV+ H G +
Sbjct: 72 PTTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTH---------GHEV 122
Query: 118 KSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKT 177
+ + D + S++T ++ F H + L V +
Sbjct: 123 GWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKSAFG--SHPTFEHLPSGVDVKRFTPA 180
Query: 178 TPEPIENVLNPLPGKED---IVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLV 234
TPE L + I S R +K + I ++ + + D +L+
Sbjct: 181 TPEDKSATRKKLGFTDTTPVIACNS--RLVPRKGQDSLIKAMPQVIAARPD-----AQLL 233
Query: 235 VAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFK----FC---HCI 287
+ G Y L L + S NV FL I+ F
Sbjct: 234 IVGS--------GRYESTLRRLATDV--SQNVKFLGRLEYQDMINTLAAADIFAMPARTR 283
Query: 288 IYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIV 346
E GIV +EA C PVIA SGG E+V TG + E + + ++ + +++
Sbjct: 284 GGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELL 342
Query: 347 DNDGNIIQQFSQFGFNRFNEKFS 369
D+ G ++S
Sbjct: 343 DDPI-RRAAMGAAGRAHVEAEWS 364
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 1e-25
Identities = 51/295 (17%), Positives = 98/295 (33%), Gaps = 46/295 (15%)
Query: 129 EEWTTCKADKIVVNSEFTKS--VVQATFRSLDHK-------------CLDILYPSVYTEG 173
E T ADKI+V++ + +R + + +
Sbjct: 184 ERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKI 243
Query: 174 LEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKL 233
K T ++ + I+ S R ++KKN + + + E++ L
Sbjct: 244 KAKITKYLERDLGSERMELPAIIASS--RLDQKKNHYGLVEAYVQNK-----ELQDKANL 296
Query: 234 VVAGG--------YDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFK--- 282
V+ Y E E ++ L+ V S +
Sbjct: 297 VLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLA 356
Query: 283 -----FCHCIIYTPS-NEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCE-SNE 335
F S E FG+ P+EAM P + +GGP E + G+ G L + +
Sbjct: 357 SKGSVFA-----LTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDP 411
Query: 336 EAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKKTK 390
E A+ + K + + + G R E++++Q + ++ + D+K +
Sbjct: 412 EDIARGLLKAFE-SEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKDE 465
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 99.3 bits (247), Expect = 1e-22
Identities = 51/228 (22%), Positives = 95/228 (41%), Gaps = 21/228 (9%)
Query: 168 SVYTEGLEKTTPEPIEN--VLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSD 225
+ + +E+ +EN L L K+ + ++ R +R KNL +
Sbjct: 544 TKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNT----- 598
Query: 226 EMKTHVKLVVAGGYDPH---NIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKIS--- 279
++ LVV GG + E K++ L+++ KL+ +++S D +
Sbjct: 599 RLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELY 658
Query: 280 --LFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFL-----CE 332
+ + E FG+ +EAM C P A GGP E +V G++GF +
Sbjct: 659 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGD 718
Query: 333 SNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTI 380
+ A K ++ + + S+ G R EK+++Q +S +L T+
Sbjct: 719 QAADTLADFFTKCKEDP-SHWDEISKGGLQRIEEKYTWQIYSQRLLTL 765
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 90.2 bits (223), Expect = 5e-20
Identities = 47/336 (13%), Positives = 109/336 (32%), Gaps = 39/336 (11%)
Query: 75 EKPDLVFCDLVSICIPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYR-FPLNKLEEWTT 133
KPD+V PI+ +K ++ + + N ++
Sbjct: 80 HKPDIVMI----YNDPIV----IGNYLLAMGKCSHRTKIVLYVDLVSKNIRENLWWIFSH 131
Query: 134 CKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKE 193
K ++ S+ S + ++I+ V T+ T ++ +
Sbjct: 132 PKVVGVMAMSKCWISDICNYGC---KVPINIVSHFVDTK-----TIYDARKLVGLSEYND 183
Query: 194 DIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKEL 253
D++FL++NR +K L++ + + S+ D + + +
Sbjct: 184 DVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVAS 243
Query: 254 GVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAV 313
GV L+ ++ T +D ++ C I+ S E FG+ E +P+I
Sbjct: 244 GVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIIS 303
Query: 314 NSGGPKESVVDGRTGFLCES-------------------NEEAFAKAMKKIVDNDGNIIQ 354
GG + G + + + + +A D +
Sbjct: 304 AVGGADD-YFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAFTFFKDEK--NRK 360
Query: 355 QFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKKTK 390
++ + + K ++ S + N++L +++
Sbjct: 361 EYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVESR 396
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 9e-20
Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 31/164 (18%)
Query: 195 IVFL-SINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKEL 253
++FL + K + + + +L L +R D V++++ G D E
Sbjct: 211 VLFLGRYDEPR--KGMAVLLAALPKLVARFPD-----VEILIVGRGD-----------ED 252
Query: 254 GVLVKKLKLSDNVLFLTSPSDAAKISLFK----FCHCIIYTPS--NEHFGIVPIEAMFCK 307
+ + L+ ++ FL DA K S + +C P E FGIV +EAM
Sbjct: 253 ELREQAGDLAGHLRFLGQVDDATKASAMRSADVYCA-----PHLGGESFGIVLVEAMAAG 307
Query: 308 RPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDG 350
V+A + + + DG G L + + A A+ I+++D
Sbjct: 308 TAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILEDDQ 351
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 84.4 bits (208), Expect = 4e-18
Identities = 36/265 (13%), Positives = 76/265 (28%), Gaps = 39/265 (14%)
Query: 118 KSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKT 177
+S Y++ ++ V NSE K + + P + T
Sbjct: 187 ESTYKYRGPQI----------AVFNSELLKQYFNN--KGYNFTDEYFFQPKINTT----- 229
Query: 178 TPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAG 237
++N +N KE I+ + ++ L + +L + K++ G
Sbjct: 230 ----LKNYINDKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDR--SNEWKIISVG 283
Query: 238 GYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFG 297
L ++ L + L K I + H
Sbjct: 284 EKHKDI---------------ALGKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPS 328
Query: 298 IVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNI-IQQF 356
P+E VI S L + N E A+ + ++ + N + +
Sbjct: 329 YPPLEMAHFGLRVITNKYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFNNRDVDKK 388
Query: 357 SQFGFNRFNEKFSFQAFSIQLNTIV 381
+ +F+ +F ++ +
Sbjct: 389 ESSNMMFYINEFNEFSFIKEIEEKL 413
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 79.9 bits (198), Expect = 4e-18
Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 30/161 (18%)
Query: 196 VFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAG-GYDPHNIENVEYYKELG 254
+ RY +KN + I ++ + K + L++ G G K++
Sbjct: 4 KIAMVGRYSNEKNQSVLIKAVALSKY------KQDIVLLLKGKG---------PDEKKIK 48
Query: 255 VLVKKLKLSDNVLFLTSPSDAAKISLFK----FCHCIIYTPSN-EHFGIVPIEAMFCKRP 309
+L +KL + F+ + + + K + H +N E I +EA+
Sbjct: 49 LLAQKLGVKAEFGFV---NSNELLEILKTCTLYVH-----AANVESEAIACLEAISVGIV 100
Query: 310 VIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDND 349
+ NS L E N + + + ++N
Sbjct: 101 PVIANSPLSATRQFALDERSLFEPNNAKDLSAKIDWWLENK 141
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 78.6 bits (194), Expect = 2e-16
Identities = 28/175 (16%), Positives = 51/175 (29%), Gaps = 35/175 (20%)
Query: 188 PLPGKED-IVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIEN 246
KED ++F+ R K A + +LV+AG
Sbjct: 157 DQVAKEDFLLFMG--RVSPHKGALEAAAFAH----------ACGRRLVLAGP-----AWE 199
Query: 247 VEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPS----------NEHF 296
EY+ E+ + V + ++ L H ++ E
Sbjct: 200 PEYFDEI-----TRRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPG 254
Query: 297 GIVPIEAMFCKRPVIAVNSGGPKESVVD--GRTGFLCESNEEAFAKAMKKIVDND 349
V EA PV+ +G E V G+ + + + + + +D
Sbjct: 255 ATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDFAPDEARRTLAGLPASD 309
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 2e-05
Identities = 41/325 (12%), Positives = 88/325 (27%), Gaps = 88/325 (27%)
Query: 90 PILQAKQFKVLFY-----CHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSE 144
+ FK+ F+ C+ P+ +L L I + + I +
Sbjct: 175 KVQCKMDFKI-FWLNLKNCNSPETVLEMLQKLLYQI-DPNWTSRSD----HSSNIKLRIH 228
Query: 145 FTKSVVQATFRSLDHK-CLDILYPSVYTEGLEK----------TT-PEPIENVLNPLPGK 192
++ ++ +S ++ CL +L +V TT + + + L+
Sbjct: 229 SIQAELRRLLKSKPYENCLLVL-LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTT 287
Query: 193 EDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAG--------------- 237
+ + L + L+ L E+ T ++
Sbjct: 288 HISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW 347
Query: 238 ---GYDPHN------IENVE------YYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFK 282
D + +E + L V + +L
Sbjct: 348 KHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILL--------------- 392
Query: 283 FCHCIIYTPSNEHFGIVPIEAM--FCKRPVIAVNSGGPKESVV---DGRTGFLCESNEEA 337
+I+ + + + K ++ PKES + + E
Sbjct: 393 ---SLIWFDVIK---SDVMVVVNKLHKYSLVE---KQPKESTISIPSIYLELKVKLENEY 443
Query: 338 FAKAM-KKIVDNDGNIIQQFSQFGF 361
A+ + IVD+ NI + F
Sbjct: 444 ---ALHRSIVDHY-NIPKTFDSDDL 464
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 3e-04
Identities = 37/281 (13%), Positives = 91/281 (32%), Gaps = 63/281 (22%)
Query: 104 HYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLD 163
Y D L + +F+ + F +++ K +++ E ++ +
Sbjct: 17 QYKDILSVFEDAFVDN---FDCKDVQDMP-----KSILSKEEIDHIIMSKDAVSG---TL 65
Query: 164 ILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFL--SINRYERKKNLELAIYSLNSLRS 221
L+ ++ ++ E+ + +E VL + FL I +R+ ++ +Y R
Sbjct: 66 RLFWTLLSKQ-EEMVQKFVEEVLRI-----NYKFLMSPIKTEQRQPSMMTRMY--IEQRD 117
Query: 222 RLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNV------------LFL 269
RL ++ + + +N+ ++ Y +L + +L+ + NV + L
Sbjct: 118 RLYNDNQV---------FAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVAL 168
Query: 270 TSPSDAAKISLFKF---------CHC---IIYTPSNEHFGIVPIEAMFCKRPVIAVNSGG 317
F C+ ++ + I P + R + N
Sbjct: 169 DVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDP---NWTSRSDHSSNIKL 225
Query: 318 PKESVVDGRTGFLCESNEEAFAKAMKKIVDN--DGNIIQQF 356
S+ L + + + ++ N + F
Sbjct: 226 RIHSIQAELRRLLK---SKPYENCL-LVLLNVQNAKAWNAF 262
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 3e-04
Identities = 35/216 (16%), Positives = 65/216 (30%), Gaps = 25/216 (11%)
Query: 151 QATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLE 210
QA R+L++ ++ + P + LP + S ++ K+
Sbjct: 392 QAEVRALENTVHEVTTSIGK-RIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKR--- 447
Query: 211 LAIYSLNSLRSRLSDEMKTHVKLVVAGGYDP--HNIENVEYYKELGVLVKKLKLSDNVLF 268
I +L +L + TH +V D + I V+ + VK + + +
Sbjct: 448 -RILALRRPEGQLP-PIVTH--NMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNA 503
Query: 269 LTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDG--- 325
+ CH ++ E +G P E P I N G + D
Sbjct: 504 NNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIET 563
Query: 326 ------------RTGFLCESNEEAFAKAMKKIVDND 349
R + + E M++ V
Sbjct: 564 NQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKT 599
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 390 | |||
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 100.0 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 100.0 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 100.0 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 100.0 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 100.0 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 100.0 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.98 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.98 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.97 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.97 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.97 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.96 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.95 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.95 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.93 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.9 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.9 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.9 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.89 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.87 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.83 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.83 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.81 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.8 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.79 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.77 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.75 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.67 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.63 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 99.62 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.57 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.57 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 99.48 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 99.43 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 99.41 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 99.39 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 99.39 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 99.33 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.13 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 98.65 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 98.63 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 98.63 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 98.54 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 98.33 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 98.3 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 98.17 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 97.89 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 97.81 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 97.39 | |
| 1xv5_A | 401 | AGT, DNA alpha-glucosyltransferase; HET: DNA CME U | 96.84 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 96.67 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 96.62 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 92.94 | |
| 4fyk_A | 152 | Deoxyribonucleoside 5'-monophosphate N-glycosidas; | 89.12 | |
| 3ehd_A | 162 | Uncharacterized conserved protein; PSI,MCSG,PF0501 | 82.82 | |
| 3h5i_A | 140 | Response regulator/sensory box protein/ggdef domai | 81.54 |
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-47 Score=349.96 Aligned_cols=369 Identities=17% Similarity=0.196 Sum_probs=273.7
Q ss_pred CCcchhhhHhh-HhhhhcCCceeec--CCc--ccc--ccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAH--DHC--FKE--TKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS 74 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~--~~~--~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (390)
.||+++++.++ ++|.++||+|+++ ... ... ....++.+..++...... ... ..+..++..+.......+++
T Consensus 41 ~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~ 118 (438)
T 3c48_A 41 SGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEG-LSK-EELPTQLAAFTGGMLSFTRR 118 (438)
T ss_dssp --CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSS-CCG-GGGGGGHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCccc-cch-hHHHHHHHHHHHHHHHHHHh
Confidence 49999999999 9999999999988 211 111 122455665553211110 000 01111111111111111133
Q ss_pred --cCCCEEEEcccccchh---HHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHH
Q psy12587 75 --EKPDLVFCDLVSICIP---ILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSV 149 (390)
Q Consensus 75 --~~~Dvi~~~~~~~~~~---~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 149 (390)
.+||+||+|.+..... +.+..++|+|+++|+......................+++.+++.+|.++++|+..++.
T Consensus 119 ~~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 198 (438)
T 3c48_A 119 EKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQD 198 (438)
T ss_dssp HTCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHH
T ss_pred ccCCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHH
Confidence 3599999998543332 23334599999999864321110000000001122356678899999999999999999
Q ss_pred HHHHhccCCCCceeecCCCCCCCCCCCCCccc---hhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccc
Q psy12587 150 VQATFRSLDHKCLDILYPSVYTEGLEKTTPEP---IENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDE 226 (390)
Q Consensus 150 ~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~ 226 (390)
+.+.++ .+..++.++|||+|.+.+.+..... .++.++ ...+.++|+++|++.+.||++.+++|+..+.++.|+
T Consensus 199 ~~~~~g-~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~--~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~- 274 (438)
T 3c48_A 199 LMHHYD-ADPDRISVVSPGADVELYSPGNDRATERSRRELG--IPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPD- 274 (438)
T ss_dssp HHHHHC-CCGGGEEECCCCCCTTTSCCC----CHHHHHHTT--CCSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTT-
T ss_pred HHHHhC-CChhheEEecCCccccccCCcccchhhhhHHhcC--CCCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCC-
Confidence 988665 3367899999999998877654332 555554 234778999999999999999999999999988651
Q ss_pred cccceEEEEEcC----CCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHh
Q psy12587 227 MKTHVKLVVAGG----YDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIE 302 (390)
Q Consensus 227 ~~~~~~l~i~G~----~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~E 302 (390)
.+++|+|+|+ ++.. +.++++++++++.++|.|+|+++++++.++|+.||++++||..|++|++++|
T Consensus 275 --~~~~l~i~G~~~~~g~~~--------~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~E 344 (438)
T 3c48_A 275 --RNLRVIICGGPSGPNATP--------DTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAME 344 (438)
T ss_dssp --CSEEEEEECCBC--------------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHH
T ss_pred --cceEEEEEeCCCCCCcHH--------HHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHH
Confidence 1399999998 4433 8899999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHH
Q psy12587 303 AMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIV 381 (390)
Q Consensus 303 a~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
||+||+|||+++.++..|++.++.+|+++++ |+++++++|.+++++++ .++++++++++.+.+ |+|+.+++++.++|
T Consensus 345 ama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~-~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~ 422 (438)
T 3c48_A 345 AQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDE-TRIRMGEDAVEHART-FSWAATAAQLSSLY 422 (438)
T ss_dssp HHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred HHHcCCCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHh-CCHHHHHHHHHHHH
Confidence 9999999999999999999999999999998 99999999999999998 999999999999966 99999999999999
Q ss_pred Hhhhhhc
Q psy12587 382 NNMLDKK 388 (390)
Q Consensus 382 ~~~~~~~ 388 (390)
+++++++
T Consensus 423 ~~~~~~~ 429 (438)
T 3c48_A 423 NDAIANE 429 (438)
T ss_dssp HHHHHTC
T ss_pred HHHhhhc
Confidence 9998764
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-47 Score=349.03 Aligned_cols=367 Identities=17% Similarity=0.211 Sum_probs=278.7
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecC---Cccccc-------------------cCCCcceEEecccc-cc-ccch-h--
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHD---HCFKET-------------------KDGTLPVKVIGDWL-PR-NIFG-K-- 53 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~---~~~~~~-------------------~~~~~~i~~~~~~~-~~-~~~~-~-- 53 (390)
.||+++++.+| ++|.++||+|+++. ...... ...++.+..++... .. ..+. .
T Consensus 17 ~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~~~~~~~~~~~~~~ 96 (439)
T 3fro_A 17 VGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWD 96 (439)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEEESGGGGCSSTTCSHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEecchhccccccccCCcc
Confidence 59999999999 99999999999981 111100 33556666654311 01 1111 1
Q ss_pred --hHHHHHHHHHHHHHHHHHHhh-cCCCEEEEcccccchhHH---HhhcccEEEEeecCCccccchhhhhhhhc----cc
Q psy12587 54 --FYALCMYLRMIVIALYVAWYS-EKPDLVFCDLVSICIPIL---QAKQFKVLFYCHYPDQLLSKQGSFLKSIY----RF 123 (390)
Q Consensus 54 --~~~~~~~~~~~~~~~~~~~~~-~~~Dvi~~~~~~~~~~~~---~~~~~~~v~~~h~~~~~~~~~~~~~~~~~----~~ 123 (390)
...+..+...........+.+ .+||+||+|++...+... +..++|+|+++|+................ ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ 176 (439)
T 3fro_A 97 GLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPY 176 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCS
T ss_pred hhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEecccccccCchHHhCcccccccccc
Confidence 111111212211111111112 699999999876544333 33459999999987643222221111111 22
Q ss_pred chhhHHHHHhcCcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCC--------CccchhhhcCCCCCCCCe
Q psy12587 124 PLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKT--------TPEPIENVLNPLPGKEDI 195 (390)
Q Consensus 124 ~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~~~ 195 (390)
....+++.+++.+|.++++|+..++.....++. +..++.++|||+|.+.+.+. ....+++.++ + .++ +
T Consensus 177 ~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~-~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~-~ 252 (439)
T 3fro_A 177 PDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRN-FEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFG-M-DEG-V 252 (439)
T ss_dssp SEECHHHHHHHHCSEEEESCHHHHHHTHHHHGG-GTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHT-C-CSC-E
T ss_pred ceeeHhhhhhhhccEEEecCHHHHHHHhhhhhh-cCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcC-C-CCC-c
Confidence 223677888999999999999999886554432 37899999999999888764 1233444554 2 334 9
Q ss_pred EEEEeeccc-ccCCHHHHHHHHHHHHhhc--ccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCC
Q psy12587 196 VFLSINRYE-RKKNLELAIYSLNSLRSRL--SDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSP 272 (390)
Q Consensus 196 ~i~~~g~~~-~~K~~~~ll~a~~~l~~~~--~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~ 272 (390)
+|+++|++. +.||++.+++|++.+.++. ++ ++|+|+|+++. .|.+.+++++++++ +.+.+.|++
T Consensus 253 ~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~-----~~l~i~G~g~~------~~~~~l~~~~~~~~--~~~~~~g~~ 319 (439)
T 3fro_A 253 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE-----MRFIIIGKGDP------ELEGWARSLEEKHG--NVKVITEML 319 (439)
T ss_dssp EEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGG-----EEEEEECCCCH------HHHHHHHHHHHHCT--TEEEECSCC
T ss_pred EEEEEcccccccccHHHHHHHHHHHHhcccCCC-----eEEEEEcCCCh------hHHHHHHHHHhhcC--CEEEEcCCC
Confidence 999999999 9999999999999999876 64 99999998864 56688999999987 778899999
Q ss_pred ChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhc-CCh
Q psy12587 273 SDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVD-NDG 350 (390)
Q Consensus 273 ~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~-~~~ 350 (390)
+++++..+|+.||++++||..|++|++++|||+||+|||+|+.++..|++.++ +|+++++ |+++++++|.++++ +++
T Consensus 320 ~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll~~~~~ 398 (439)
T 3fro_A 320 SREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILVKAGDPGELANAILKALELSRS 398 (439)
T ss_dssp CHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEECTTCHHHHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEeCCCCHHHHHHHHHHHHhcCHH
Confidence 99999999999999999999999999999999999999999999999999887 9999999 99999999999999 888
Q ss_pred hHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhhhc
Q psy12587 351 NIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKK 388 (390)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (390)
.++++++++++.+ ++|+|+.+++++.++|++++++.
T Consensus 399 -~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~ 434 (439)
T 3fro_A 399 -DLSKFRENCKKRA-MSFSWEKSAERYVKAYTGSIDRA 434 (439)
T ss_dssp -TTHHHHHHHHHHH-HTSCHHHHHHHHHHHHHTCSCCB
T ss_pred -HHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999 78999999999999999998765
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-46 Score=339.35 Aligned_cols=352 Identities=16% Similarity=0.221 Sum_probs=267.3
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCcc--c-cccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cC
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHCF--K-ETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EK 76 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~~--~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (390)
.||+++++.+| ++|.++||+|+++.... . .....++.+..+.... ...+........... ....+++ .+
T Consensus 26 ~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~-----~l~~~l~~~~ 99 (394)
T 2jjm_A 26 VGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVNQ-YSVFQYPPYDLALAS-----KMAEVAQREN 99 (394)
T ss_dssp -CHHHHHHHHHHHHHHHTTCEEEEECSSCC----CCCTTEEEECCCCC-----CCSCCHHHHHHH-----HHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccCCceEEEeccccc-ccccccccccHHHHH-----HHHHHHHHcC
Confidence 59999999999 99999999999882211 1 1122333333332110 000110000001111 1112445 89
Q ss_pred CCEEEEcccccch----hHHHhh--cccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHH
Q psy12587 77 PDLVFCDLVSICI----PILQAK--QFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVV 150 (390)
Q Consensus 77 ~Dvi~~~~~~~~~----~~~~~~--~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 150 (390)
||+||+|+..... ...+.. ++|+|+++|+.+..... .......+++.+++.+|.++++|+..++.+
T Consensus 100 ~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 171 (394)
T 2jjm_A 100 LDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLG--------SDPSLNNLIRFGIEQSDVVTAVSHSLINET 171 (394)
T ss_dssp CSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHTTT--------TCTTTHHHHHHHHHHSSEEEESCHHHHHHH
T ss_pred CCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccccC--------CCHHHHHHHHHHHhhCCEEEECCHHHHHHH
Confidence 9999999753221 122232 38999999974321110 112234567788899999999999999999
Q ss_pred HHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccc
Q psy12587 151 QATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTH 230 (390)
Q Consensus 151 ~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~ 230 (390)
.+.++. ..++.++|||+|.+.+.+......++.++ ...+.++++++|++.+.||++.+++|++.+.++ + +
T Consensus 172 ~~~~~~--~~~~~vi~ngv~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~-----~ 241 (394)
T 2jjm_A 172 HELVKP--NKDIQTVYNFIDERVYFKRDMTQLKKEYG--ISESEKILIHISNFRKVKRVQDVVQAFAKIVTE-V-----D 241 (394)
T ss_dssp HHHTCC--SSCEEECCCCCCTTTCCCCCCHHHHHHTT--CC---CEEEEECCCCGGGTHHHHHHHHHHHHHS-S-----C
T ss_pred HHhhCC--cccEEEecCCccHHhcCCcchHHHHHHcC--CCCCCeEEEEeeccccccCHHHHHHHHHHHHhh-C-----C
Confidence 987652 47999999999998887665555555554 223678899999999999999999999999876 3 3
Q ss_pred eEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCE
Q psy12587 231 VKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPV 310 (390)
Q Consensus 231 ~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pv 310 (390)
++|+|+|+++.. ++++++++++++.++|.++|+. +++.++|+.||++++||..|++|++++|||+||+||
T Consensus 242 ~~l~i~G~g~~~--------~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pv 311 (394)
T 2jjm_A 242 AKLLLVGDGPEF--------CTILQLVKNLHIEDRVLFLGKQ--DNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPC 311 (394)
T ss_dssp CEEEEECCCTTH--------HHHHHHHHTTTCGGGBCCCBSC--SCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTCCE
T ss_pred CEEEEECCchHH--------HHHHHHHHHcCCCCeEEEeCch--hhHHHHHHhCCEEEeccccCCCchHHHHHHhcCCCE
Confidence 899999988764 8899999999999999999974 556899999999999999999999999999999999
Q ss_pred EEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhhhc
Q psy12587 311 IAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKK 388 (390)
Q Consensus 311 i~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (390)
|+++.++..|++.++.+|+++++ |+++++++|.+++++++ .++++++++++.+.++|+|+.+++++.++|+++++++
T Consensus 312 I~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 389 (394)
T 2jjm_A 312 IGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEE-LHRNMGERARESVYEQFRSEKIVSQYETIYYDVLRDD 389 (394)
T ss_dssp EEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC---
T ss_pred EEecCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999998 99999999999999998 9999999999999899999999999999999998764
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-47 Score=354.58 Aligned_cols=379 Identities=17% Similarity=0.203 Sum_probs=278.9
Q ss_pred CCcchhhhHhh-HhhhhcCCceeec--CCcc---cc------cc--CCCcceEEeccccccccchhhHHHHHHHHHHHHH
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAH--DHCF---KE------TK--DGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIA 67 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~--~~~~---~~------~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (390)
.||+++++.++ ++|.++||+|+++ .... .. .. ..++.+..++..... .... ..+..++..+...
T Consensus 32 ~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~~~~-~~~~-~~~~~~~~~~~~~ 109 (499)
T 2r60_A 32 FGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRIPFGGDK-FLPK-EELWPYLHEYVNK 109 (499)
T ss_dssp BSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEECCSCSS-CCCG-GGCGGGHHHHHHH
T ss_pred CCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEecCCCcC-CcCH-HHHHHHHHHHHHH
Confidence 59999999999 9999999999988 2111 11 11 345666665422111 0000 0011111111111
Q ss_pred HHHHHhh--cCCCEEEEcccccchh---HHHhhcccEEEEeecCCccccchh-------hhhhhhccc-chhhHHHHHhc
Q psy12587 68 LYVAWYS--EKPDLVFCDLVSICIP---ILQAKQFKVLFYCHYPDQLLSKQG-------SFLKSIYRF-PLNKLEEWTTC 134 (390)
Q Consensus 68 ~~~~~~~--~~~Dvi~~~~~~~~~~---~~~~~~~~~v~~~h~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~ 134 (390)
+...+.+ .+||+||+|.+...+. +.+..++|+|+++|+......... ......++. ....+++.+++
T Consensus 110 l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (499)
T 2r60_A 110 IINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMS 189 (499)
T ss_dssp HHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHh
Confidence 1111222 3899999998644333 233445999999998643211100 001111111 12345678899
Q ss_pred CcceEEEccHhHHHHHHHH--hccC----CCCceeecCCCCCCCCCCCCCc----cchhhhcCC----CCCCCCeEEEEe
Q psy12587 135 KADKIVVNSEFTKSVVQAT--FRSL----DHKCLDILYPSVYTEGLEKTTP----EPIENVLNP----LPGKEDIVFLSI 200 (390)
Q Consensus 135 ~ad~ii~~s~~~~~~~~~~--~~~~----~~~~~~vi~~~~~~~~~~~~~~----~~~~~~~~~----l~~~~~~~i~~~ 200 (390)
.+|.++++|+..++.+.+. ++.. +..++.++|||+|.+.+.+... ..+++.++. ++ .+.++|+++
T Consensus 190 ~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~~~~i~~v 268 (499)
T 2r60_A 190 YADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSER-MELPAIIAS 268 (499)
T ss_dssp HCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSSSCCCHHHHHHHHHHHHHHSCGGG-TTSCEEEEC
T ss_pred cCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCCcChhhcCccchhhhHHHHHHHhcccccccC-CCCcEEEEe
Confidence 9999999999999988876 5522 3679999999999988876543 223332210 02 256789999
Q ss_pred ecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCC------C-cchhHHHHHHHHHHHHcCCCCcEEEecCCC
Q psy12587 201 NRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPH------N-IENVEYYKELGVLVKKLKLSDNVLFLTSPS 273 (390)
Q Consensus 201 g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~------~-~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~ 273 (390)
|++.+.||++.+++|+..+.++.++ .+.++|+|+.+.. . ..+..|.++++++++++++.++|.|+|+++
T Consensus 269 Grl~~~Kg~~~li~a~~~l~~~~~~----~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~ 344 (499)
T 2r60_A 269 SRLDQKKNHYGLVEAYVQNKELQDK----ANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNS 344 (499)
T ss_dssp SCCCGGGCHHHHHHHHHTCHHHHHH----CEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCS
T ss_pred ecCccccCHHHHHHHHHHHHHhCCC----ceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCC
Confidence 9999999999999999999877554 4689999983221 0 113345799999999999999999999999
Q ss_pred hHHHHHHHHhc----ceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcC
Q psy12587 274 DAAKISLFKFC----HCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDN 348 (390)
Q Consensus 274 ~~e~~~~~~~a----dv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~ 348 (390)
++++..+|+.| |++|+||..|+||++++|||+||+|||+|+.++..|++.++.+|+++++ |+++++++|.+++++
T Consensus 345 ~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~~ 424 (499)
T 2r60_A 345 QQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFES 424 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCCceEEEeCCCCHHHHHHHHHHHHhC
Confidence 99999999999 9999999999999999999999999999999999999999999999998 999999999999999
Q ss_pred ChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhhhc
Q psy12587 349 DGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKK 388 (390)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (390)
++ .++++++++++.+.++|+|+.+++++.++|+++++++
T Consensus 425 ~~-~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~ 463 (499)
T 2r60_A 425 EE-TWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRK 463 (499)
T ss_dssp HH-HHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC-
T ss_pred HH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 98 9999999999999878999999999999999998764
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-45 Score=333.77 Aligned_cols=344 Identities=17% Similarity=0.150 Sum_probs=269.5
Q ss_pred CCcchhhhHhh-HhhhhcCCceeec--CCccc----cccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAH--DHCFK----ETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS 74 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~--~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (390)
.||+++++.++ ++| +||+|+++ ..... .....++.+..++....... ... ... ...+++
T Consensus 18 ~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~-----l~~~~~ 83 (394)
T 3okp_A 18 IGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVMLPT---PTT----AHA-----MAEIIR 83 (394)
T ss_dssp CSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCCSC---HHH----HHH-----HHHHHH
T ss_pred cchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEccccccccc---hhh----HHH-----HHHHHH
Confidence 59999999999 999 69999988 22211 11234456665543221111 111 111 112444
Q ss_pred -cCCCEEEEcccccchhH---HHhhcc-cEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHH
Q psy12587 75 -EKPDLVFCDLVSICIPI---LQAKQF-KVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSV 149 (390)
Q Consensus 75 -~~~Dvi~~~~~~~~~~~---~~~~~~-~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 149 (390)
.+||+||++.......+ ++..++ ++|+++|+.+... ........+.+.+++.+|.++++|+..++.
T Consensus 84 ~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~---------~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 154 (394)
T 3okp_A 84 EREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW---------SMLPGSRQSLRKIGTEVDVLTYISQYTLRR 154 (394)
T ss_dssp HTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH---------TTSHHHHHHHHHHHHHCSEEEESCHHHHHH
T ss_pred hcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh---------hhcchhhHHHHHHHHhCCEEEEcCHHHHHH
Confidence 89999999885433222 233345 4888999753311 112233456677889999999999999999
Q ss_pred HHHHhccCCCCceeecCCCCCCCCCCCCCc---cchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccc
Q psy12587 150 VQATFRSLDHKCLDILYPSVYTEGLEKTTP---EPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDE 226 (390)
Q Consensus 150 ~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~ 226 (390)
+.+.++ . ..++.++|||+|.+.+.+... ...++.++ ..++.++|+++|++.+.||++.++++++.+.++.++
T Consensus 155 ~~~~~~-~-~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~- 229 (394)
T 3okp_A 155 FKSAFG-S-HPTFEHLPSGVDVKRFTPATPEDKSATRKKLG--FTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPD- 229 (394)
T ss_dssp HHHHHC-S-SSEEEECCCCBCTTTSCCCCHHHHHHHHHHTT--CCTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTT-
T ss_pred HHHhcC-C-CCCeEEecCCcCHHHcCCCCchhhHHHHHhcC--CCcCceEEEEEeccccccCHHHHHHHHHHHHhhCCC-
Confidence 999865 2 579999999999988876332 33445554 234668899999999999999999999999988875
Q ss_pred cccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCC-------CCCCcc
Q psy12587 227 MKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSN-------EHFGIV 299 (390)
Q Consensus 227 ~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~-------e~~~~~ 299 (390)
++|+|+|+++.. +.+++++ .++.++|.++|+++++++.++|+.||++++||.. |++|++
T Consensus 230 ----~~l~i~G~g~~~--------~~l~~~~--~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~ 295 (394)
T 3okp_A 230 ----AQLLIVGSGRYE--------STLRRLA--TDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIV 295 (394)
T ss_dssp ----CEEEEECCCTTH--------HHHHHHT--GGGGGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHH
T ss_pred ----eEEEEEcCchHH--------HHHHHHH--hcccCeEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcH
Confidence 999999998764 7777777 5556899999999999999999999999999999 999999
Q ss_pred HHhhhhcCCCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHH
Q psy12587 300 PIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLN 378 (390)
Q Consensus 300 ~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (390)
++|||++|+|||+++.++..|++.++ +|+++++ |+++++++|.+++++++ .++++++++++.+.++|+|+.+++++.
T Consensus 296 ~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~ 373 (394)
T 3okp_A 296 YLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELLDDPI-RRAAMGAAGRAHVEAEWSWEIMGERLT 373 (394)
T ss_dssp HHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHHTCHH-HHHHHHHHHHHHHHHHTBHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeCCCChHHHHhcC-CceEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999999999999999999999998 9999999 99999999999999998 999999999999988899999999999
Q ss_pred HHHHhhhhhcC
Q psy12587 379 TIVNNMLDKKT 389 (390)
Q Consensus 379 ~~~~~~~~~~~ 389 (390)
++|+++..+++
T Consensus 374 ~~~~~~~r~~~ 384 (394)
T 3okp_A 374 NILQSEPRKLA 384 (394)
T ss_dssp HHHHSCCC---
T ss_pred HHHHHhccCcc
Confidence 99999876543
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-45 Score=350.29 Aligned_cols=377 Identities=18% Similarity=0.214 Sum_probs=270.2
Q ss_pred CCcchhhhHh--------h-HhhhhcCCcee----ec----CCc----c---ccccC--CCcceEEecccccc---ccch
Q psy12587 2 LGATARLTIT--------A-TAWGATGPRTT----AH----DHC----F---KETKD--GTLPVKVIGDWLPR---NIFG 52 (390)
Q Consensus 2 ~GG~~~~~~~--------l-~~L~~~G~~V~----~~----~~~----~---~~~~~--~~~~i~~~~~~~~~---~~~~ 52 (390)
+||...++.+ | ++|+++||+|+ ++ ... + .+... .++.|.+++..... ..+.
T Consensus 301 tGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l 380 (816)
T 3s28_A 301 TGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWI 380 (816)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCC
T ss_pred CCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCcceeecCcCCeEEEEecCCCccccccccc
Confidence 6999999985 6 67778999986 55 111 0 11111 35666666422110 0001
Q ss_pred hhHHHHHHHHHHHHHHHHHHhh---cCCCEEEEcccccchhHH---HhhcccEEEEeecCCccccchhhh----hhhhcc
Q psy12587 53 KFYALCMYLRMIVIALYVAWYS---EKPDLVFCDLVSICIPIL---QAKQFKVLFYCHYPDQLLSKQGSF----LKSIYR 122 (390)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~---~~~Dvi~~~~~~~~~~~~---~~~~~~~v~~~h~~~~~~~~~~~~----~~~~~~ 122 (390)
....++.++..+.......+.+ .+|||||+|.+..++.+. +..++|+|++.|+........... ....+.
T Consensus 381 ~k~~L~~~L~~F~~~~l~~il~~~~~~PDVIHsH~~~sglva~llar~~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~ 460 (816)
T 3s28_A 381 SRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYH 460 (816)
T ss_dssp CTTTCGGGHHHHHHHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSCCHHHHSTTTTTTHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEeCCchHHHHHHHHHHHcCCCEEEEEecccccccccccchhhhHHHHHH
Confidence 1112223333332121222222 589999999865554433 344599999999754322111110 111111
Q ss_pred cch-hhHHHHHhcCcceEEEccHhHHHHHHHH---hcc-----------------CCCCceeecCCCCCCCCCCCCCccc
Q psy12587 123 FPL-NKLEEWTTCKADKIVVNSEFTKSVVQAT---FRS-----------------LDHKCLDILYPSVYTEGLEKTTPEP 181 (390)
Q Consensus 123 ~~~-~~~~~~~~~~ad~ii~~s~~~~~~~~~~---~~~-----------------~~~~~~~vi~~~~~~~~~~~~~~~~ 181 (390)
... ...++.+++.||.|+++|+..++.+.+. |.. ....++.+||||+|.+.|.+.....
T Consensus 461 ~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~ 540 (816)
T 3s28_A 461 FSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEK 540 (816)
T ss_dssp HHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTT
T ss_pred HHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhh
Confidence 111 1236678999999999999988753221 111 0012899999999999887654221
Q ss_pred -------------------hhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCC-
Q psy12587 182 -------------------IENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDP- 241 (390)
Q Consensus 182 -------------------~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~- 241 (390)
.++.++.+...+.++|+++||+.+.||++.+++|+..+.+..++ ++|+|+|+++.
T Consensus 541 ~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~-----v~LvIvG~g~~~ 615 (816)
T 3s28_A 541 RRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLREL-----ANLVVVGGDRRK 615 (816)
T ss_dssp TCCGGGHHHHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHH-----CEEEEECCCTTS
T ss_pred hhhhhccccccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCC-----eEEEEEeCCCcc
Confidence 12223211245778999999999999999999999999887775 99999999873
Q ss_pred --CCcchhHHHHHHHHHHHHcCCCCcEEEecCCC----hHHHHHHHH-hcceEEeCCCCCCCCccHHhhhhcCCCEEEec
Q psy12587 242 --HNIENVEYYKELGVLVKKLKLSDNVLFLTSPS----DAAKISLFK-FCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVN 314 (390)
Q Consensus 242 --~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~----~~e~~~~~~-~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~ 314 (390)
...++..+.++++++++++++.++|.|+|+++ .+++..+|+ .+|++++||..|+||++++|||+||+|||+|+
T Consensus 616 ~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd 695 (816)
T 3s28_A 616 ESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC 695 (816)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEES
T ss_pred cccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeC
Confidence 12233457789999999999999999999655 488899998 57999999999999999999999999999999
Q ss_pred CCCcccceecCcceeeecC-CHHHHHHHHHHHh----cCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhh
Q psy12587 315 SGGPKESVVDGRTGFLCES-NEEAFAKAMKKIV----DNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNM 384 (390)
Q Consensus 315 ~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (390)
.||..|++.++.+|+++++ |+++++++|.+++ +|++ .++++++++++.+.++|||+.+++++.++|+..
T Consensus 696 ~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~-~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 696 KGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPS-HWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp SBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHCTH-HHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred CCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999 9999999997776 8999 999999999999989999999999999999865
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=330.78 Aligned_cols=293 Identities=14% Similarity=0.169 Sum_probs=230.2
Q ss_pred cCCCEEEEcccccchhH---HHh--hcccEEEEeecCCccccchhhh------hhhhc-----cc-chhhHHHHHhcCcc
Q psy12587 75 EKPDLVFCDLVSICIPI---LQA--KQFKVLFYCHYPDQLLSKQGSF------LKSIY-----RF-PLNKLEEWTTCKAD 137 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~---~~~--~~~~~v~~~h~~~~~~~~~~~~------~~~~~-----~~-~~~~~~~~~~~~ad 137 (390)
.+||+||+|++...+.. .+. .++|+|+++|+........... ....+ .. ....+++.+++.+|
T Consensus 129 ~~~DiIh~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 208 (485)
T 1rzu_A 129 WRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTAT 208 (485)
T ss_dssp CCCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCS
T ss_pred CCCCEEEecccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcC
Confidence 79999999985443322 222 4599999999864321110000 00000 00 01256788899999
Q ss_pred eEEEccHhHHHHHHHH-hc-------cCCCCceeecCCCCCCCCCCCCCc-------------------cchhhhcCCCC
Q psy12587 138 KIVVNSEFTKSVVQAT-FR-------SLDHKCLDILYPSVYTEGLEKTTP-------------------EPIENVLNPLP 190 (390)
Q Consensus 138 ~ii~~s~~~~~~~~~~-~~-------~~~~~~~~vi~~~~~~~~~~~~~~-------------------~~~~~~~~~l~ 190 (390)
.++++|+..++.+.+. ++ ..+..++.+||||+|.+.+.+... ..+++.++ ++
T Consensus 209 ~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~ 287 (485)
T 1rzu_A 209 ALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFR-ID 287 (485)
T ss_dssp EEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHT-CC
T ss_pred EEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcC-CC
Confidence 9999999999988764 32 023579999999999988776432 23444444 34
Q ss_pred CCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEE-Ee
Q psy12587 191 GKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVL-FL 269 (390)
Q Consensus 191 ~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~-~~ 269 (390)
.++.++|+++||+.+.||++.+++|+..+.+. +++|+|+|+++. .+.+.+++++++++ ++|. +.
T Consensus 288 ~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~-------~~~l~ivG~g~~------~~~~~l~~~~~~~~--~~v~~~~ 352 (485)
T 1rzu_A 288 DDGSPLFCVISRLTWQKGIDLMAEAVDEIVSL-------GGRLVVLGAGDV------ALEGALLAAASRHH--GRVGVAI 352 (485)
T ss_dssp CSSSCEEEEESCBSTTTTHHHHHTTHHHHHHT-------TCEEEEEECBCH------HHHHHHHHHHHHTT--TTEEEEE
T ss_pred CCCCeEEEEEccCccccCHHHHHHHHHHHHhc-------CceEEEEeCCch------HHHHHHHHHHHhCC--CcEEEec
Confidence 43366899999999999999999999999764 399999999853 34588899998885 6787 78
Q ss_pred cCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceecC---------cceeeecC-CHHHHH
Q psy12587 270 TSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDG---------RTGFLCES-NEEAFA 339 (390)
Q Consensus 270 g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~---------~~g~~~~~-~~~~l~ 339 (390)
|+ +++++..+|+.||++++||..|+||++++|||+||+|||+|+.+|.+|++.++ .+|+++++ |+++++
T Consensus 353 g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la 431 (485)
T 1rzu_A 353 GY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLK 431 (485)
T ss_dssp SC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHH
T ss_pred CC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCCCCHHHHH
Confidence 87 78888899999999999999999999999999999999999999999999998 89999999 999999
Q ss_pred HHHHHHh---cCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhhhc
Q psy12587 340 KAMKKIV---DNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKK 388 (390)
Q Consensus 340 ~~i~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (390)
++|.+++ ++++ .++++++++++ ++|||+.+++++.++|++++.++
T Consensus 432 ~~i~~ll~~~~~~~-~~~~~~~~~~~---~~fs~~~~~~~~~~~y~~~~~~~ 479 (485)
T 1rzu_A 432 QAIRRTVRYYHDPK-LWTQMQKLGMK---SDVSWEKSAGLYAALYSQLISKG 479 (485)
T ss_dssp HHHHHHHHHHTCHH-HHHHHHHHHHT---CCCBHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHhCCHH-HHHHHHHHHHH---HhCChHHHHHHHHHHHHHhhCCC
Confidence 9999999 7887 89999988864 79999999999999999998754
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-43 Score=324.92 Aligned_cols=293 Identities=15% Similarity=0.135 Sum_probs=228.5
Q ss_pred cCCCEEEEcccccchhHHH----hhcccEEEEeecCCccccchhhh------hhhhc------ccchhhHHHHHhcCcce
Q psy12587 75 EKPDLVFCDLVSICIPILQ----AKQFKVLFYCHYPDQLLSKQGSF------LKSIY------RFPLNKLEEWTTCKADK 138 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~~----~~~~~~v~~~h~~~~~~~~~~~~------~~~~~------~~~~~~~~~~~~~~ad~ 138 (390)
.+||+||+|++...+.... ..++|+|+++|+........... ....+ ......+++.+++.+|.
T Consensus 128 ~~~Divh~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 207 (485)
T 2qzs_A 128 WRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADH 207 (485)
T ss_dssp CCCSEEEEETGGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSE
T ss_pred CCCCEEEeeccchhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCe
Confidence 5899999998654443322 23499999999864321110000 00000 00123567788899999
Q ss_pred EEEccHhHHHHHHHH-hccC-------CC--CceeecCCCCCCCCCCCCCc-------------------cchhhhcCCC
Q psy12587 139 IVVNSEFTKSVVQAT-FRSL-------DH--KCLDILYPSVYTEGLEKTTP-------------------EPIENVLNPL 189 (390)
Q Consensus 139 ii~~s~~~~~~~~~~-~~~~-------~~--~~~~vi~~~~~~~~~~~~~~-------------------~~~~~~~~~l 189 (390)
++++|+..++.+.+. ++.. +. .++.+||||+|.+.+.+... ..+++.++ +
T Consensus 208 vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~ 286 (485)
T 2qzs_A 208 ITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMG-L 286 (485)
T ss_dssp EEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHT-C
T ss_pred EEecCHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcC-C
Confidence 999999999988764 3310 12 68999999999988776432 23444444 2
Q ss_pred CC-CCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEE-
Q psy12587 190 PG-KEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVL- 267 (390)
Q Consensus 190 ~~-~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~- 267 (390)
+. .+.++|+++||+.+.||++.+++|++.+.+. +++|+|+|+++. .+.+.+++++++++ ++|.
T Consensus 287 ~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~-------~~~l~ivG~g~~------~~~~~l~~~~~~~~--~~v~~ 351 (485)
T 2qzs_A 287 KVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQ-------GGQLALLGAGDP------VLQEGFLAAAAEYP--GQVGV 351 (485)
T ss_dssp CCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHHT-------TCEEEEEEEECH------HHHHHHHHHHHHST--TTEEE
T ss_pred CCCCCCeEEEEeccCccccCHHHHHHHHHHHhhC-------CcEEEEEeCCch------HHHHHHHHHHHhCC--CcEEE
Confidence 32 2568899999999999999999999999763 399999998753 34588899998885 6786
Q ss_pred EecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceecC---------cceeeecC-CHHH
Q psy12587 268 FLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDG---------RTGFLCES-NEEA 337 (390)
Q Consensus 268 ~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~---------~~g~~~~~-~~~~ 337 (390)
+.|+ +++++..+|+.||++|+||..|+||++++|||+||+|||+|+.+|.+|++.++ .+|+++++ |+++
T Consensus 352 ~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~ 430 (485)
T 2qzs_A 352 QIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWS 430 (485)
T ss_dssp EESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHH
T ss_pred eCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEECCCCHHH
Confidence 7887 78888999999999999999999999999999999999999999999999998 89999999 9999
Q ss_pred HHHHHHHHh---cCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhhhc
Q psy12587 338 FAKAMKKIV---DNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKK 388 (390)
Q Consensus 338 l~~~i~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (390)
++++|.+++ ++++ .++++++++++ ++|||+.+++++.++|++++...
T Consensus 431 la~~i~~ll~~~~~~~-~~~~~~~~~~~---~~fs~~~~~~~~~~ly~~~~~~~ 480 (485)
T 2qzs_A 431 LLRAIRRAFVLWSRPS-LWRFVQRQAMA---MDFSWQVAAKSYRELYYRLKLEH 480 (485)
T ss_dssp HHHHHHHHHHHHTSHH-HHHHHHHHHHH---CCCCHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHcCCHH-HHHHHHHHHHh---hcCCHHHHHHHHHHHHHHhhhhh
Confidence 999999999 6887 89999988864 79999999999999999987643
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-44 Score=320.85 Aligned_cols=347 Identities=15% Similarity=0.141 Sum_probs=259.3
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCccccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cCCCE
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EKPDL 79 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dv 79 (390)
.||+++++.++ ++|.++||+|+++..........++.+..++... .........+... ...+++ .+||+
T Consensus 13 ~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~~~~~-----l~~~i~~~~~Dv 83 (374)
T 2iw1_A 13 FGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVKS----HTNHGRNAEYYAW-----VQNHLKEHPADR 83 (374)
T ss_dssp TCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCCTTCEEEECCCCC----SSHHHHHHHHHHH-----HHHHHHHSCCSE
T ss_pred CcchhhHHHHHHHHHHhCCCeEEEEecCCCCCCCCCcEEEEEccCc----ccchhhHHHHHHH-----HHHHHhccCCCE
Confidence 49999999999 9999999999998222111222356666553211 1111111111111 113445 89999
Q ss_pred EEEcccccchhHHHhh---cccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhc--CcceEEEccHhHHHHHHHHh
Q psy12587 80 VFCDLVSICIPILQAK---QFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTC--KADKIVVNSEFTKSVVQATF 154 (390)
Q Consensus 80 i~~~~~~~~~~~~~~~---~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ad~ii~~s~~~~~~~~~~~ 154 (390)
||++.......+.... ..+.+.+.|+... .... .......+++..+. .+|.++++|+..++.+.+.+
T Consensus 84 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 155 (374)
T 2iw1_A 84 VVGFNKMPGLDVYFAADVCYAEKVAQEKGFLY------RLTS--RYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHY 155 (374)
T ss_dssp EEESSCCTTCSEEECCSCCHHHHHHHHCCHHH------HTSH--HHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHH
T ss_pred EEEecCCCCceeeeccccccceeeeecccchh------hhcH--HHHHHHHHHHHHhhccCCcEEEEcCHHHHHHHHHHh
Confidence 9999854332221111 1333333343111 0000 01122345555554 79999999999999999876
Q ss_pred ccCCCCceeecCCCCCCCCCCCCCc----cchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhh-ccccccc
Q psy12587 155 RSLDHKCLDILYPSVYTEGLEKTTP----EPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSR-LSDEMKT 229 (390)
Q Consensus 155 ~~~~~~~~~vi~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~-~~~~~~~ 229 (390)
+ .+..++.++|||+|.+.+.+... ..+++.++ ..++.++++++|++.+.||++.++++++.+.++ .+
T Consensus 156 ~-~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~----- 227 (374)
T 2iw1_A 156 Q-TEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNG--IKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRH----- 227 (374)
T ss_dssp C-CCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTT--CCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHH-----
T ss_pred C-CChhheEEecCCcCHHhcCcccchhHHHHHHHHhC--CCCCCeEEEEeccchhhcCHHHHHHHHHHhHhccCC-----
Confidence 5 33678999999999887765432 23445554 234678999999999999999999999998776 45
Q ss_pred ceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCC
Q psy12587 230 HVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRP 309 (390)
Q Consensus 230 ~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~p 309 (390)
+++|+++|+++. ++++++++++++.++|.++|+. +++.++|+.||++++||..|++|++++|||+||+|
T Consensus 228 ~~~l~i~G~g~~---------~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~P 296 (374)
T 2iw1_A 228 NTLLFVVGQDKP---------RKFEALAEKLGVRSNVHFFSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLP 296 (374)
T ss_dssp TEEEEEESSSCC---------HHHHHHHHHHTCGGGEEEESCC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCC
T ss_pred ceEEEEEcCCCH---------HHHHHHHHHcCCCCcEEECCCc--ccHHHHHHhcCEEEeccccCCcccHHHHHHHCCCC
Confidence 499999999864 7899999999998999999974 45789999999999999999999999999999999
Q ss_pred EEEecCCCcccceecCcceeeec-C-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhh
Q psy12587 310 VIAVNSGGPKESVVDGRTGFLCE-S-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLD 386 (390)
Q Consensus 310 vi~~~~~~~~e~i~~~~~g~~~~-~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (390)
||+++.++..|++.++.+|++++ + |+++++++|.+++++++ .++++++++++.+ ++++|+..++++.+++++.++
T Consensus 297 vi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~ 373 (374)
T 2iw1_A 297 VLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSP-LRMAWAENARHYA-DTQDLYSLPEKAADIITGGLD 373 (374)
T ss_dssp EEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHH-HHHHHHHHHHHHH-HHSCCSCHHHHHHHHHHCC--
T ss_pred EEEecCCCchhhhccCCceEEeCCCCCHHHHHHHHHHHHcChH-HHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999997 7 99999999999999998 9999999999998 578999999999999988764
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-43 Score=320.34 Aligned_cols=340 Identities=17% Similarity=0.188 Sum_probs=257.0
Q ss_pred CCcchhhhHhh-HhhhhcCCceeec--CCccc---cc-cCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAH--DHCFK---ET-KDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS 74 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~--~~~~~---~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (390)
.||+++++.++ ++|.++||+|+++ ..... .. ...+ .+..++.... ...+....... .....+++
T Consensus 34 ~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~-----~~l~~~l~ 104 (406)
T 2gek_A 34 PGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGG-KAVPIPYNGS---VARLRFGPATH-----RKVKKWIA 104 (406)
T ss_dssp CCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECC-CCC---------------CCHHHH-----HHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCC-cEEeccccCC---cccccccHHHH-----HHHHHHHH
Confidence 49999999999 9999999999988 11111 11 0111 1111110000 00000000000 11113445
Q ss_pred -cCCCEEEEcccccchh---HHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHH
Q psy12587 75 -EKPDLVFCDLVSICIP---ILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVV 150 (390)
Q Consensus 75 -~~~Dvi~~~~~~~~~~---~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 150 (390)
.+||+||++....... +.+..++|+|+++|+.... ......+ ...++ .+++.+|.++++|+..++.+
T Consensus 105 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~----~~~~~~~----~~~~~-~~~~~~d~ii~~s~~~~~~~ 175 (406)
T 2gek_A 105 EGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTK----SLTLSVF----QGILR-PYHEKIIGRIAVSDLARRWQ 175 (406)
T ss_dssp HHCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCS----HHHHHHH----HSTTH-HHHTTCSEEEESSHHHHHHH
T ss_pred hcCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchh----hhhHHHH----HHHHH-HHHhhCCEEEECCHHHHHHH
Confidence 8999999998544332 2233359999999985322 1111111 12233 67899999999999999999
Q ss_pred HHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecc-cccCCHHHHHHHHHHHHhhccccccc
Q psy12587 151 QATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRY-ERKKNLELAIYSLNSLRSRLSDEMKT 229 (390)
Q Consensus 151 ~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~-~~~K~~~~ll~a~~~l~~~~~~~~~~ 229 (390)
.+.++ ..++ ++|||+|.+.+.+.... .. ++. +.++++++|++ .+.||++.+++++..+.++.++
T Consensus 176 ~~~~~---~~~~-vi~~~v~~~~~~~~~~~---~~---~~~-~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~---- 240 (406)
T 2gek_A 176 MEALG---SDAV-EIPNGVDVASFADAPLL---DG---YPR-EGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPD---- 240 (406)
T ss_dssp HHHHS---SCEE-ECCCCBCHHHHHTCCCC---TT---CSC-SSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTT----
T ss_pred HHhcC---CCcE-EecCCCChhhcCCCchh---hh---ccC-CCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCC----
Confidence 88765 4678 99999998766543311 00 122 45789999999 9999999999999999988775
Q ss_pred ceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCC-CCCCCccHHhhhhcCC
Q psy12587 230 HVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPS-NEHFGIVPIEAMFCKR 308 (390)
Q Consensus 230 ~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~-~e~~~~~~~Ea~a~G~ 308 (390)
++|+|+|.++. +.++++++++ .++|.++|++++.++.++|+.||++|+||. .|++|++++|||+||+
T Consensus 241 -~~l~i~G~~~~---------~~l~~~~~~~--~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~ 308 (406)
T 2gek_A 241 -VEILIVGRGDE---------DELREQAGDL--AGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGT 308 (406)
T ss_dssp -CEEEEESCSCH---------HHHHHHTGGG--GGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTC
T ss_pred -eEEEEEcCCcH---------HHHHHHHHhc--cCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCC
Confidence 99999998752 5777777776 589999999999999999999999999996 9999999999999999
Q ss_pred CEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhhh
Q psy12587 309 PVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDK 387 (390)
Q Consensus 309 pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (390)
|||+++.++..|++.++.+|+++++ |+++++++|.+++++++ .+.++++++++.+. +|+|+.+++++.++|++++++
T Consensus 309 PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~-~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~ 386 (406)
T 2gek_A 309 AVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILEDDQ-LRAGYVARASERVH-RYDWSVVSAQIMRVYETVSGA 386 (406)
T ss_dssp EEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHHCHH-HHHHHHHHHHHHGG-GGBHHHHHHHHHHHHHHHCCT
T ss_pred CEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999988 99999999999999998 99999999999996 999999999999999999876
Q ss_pred c
Q psy12587 388 K 388 (390)
Q Consensus 388 ~ 388 (390)
+
T Consensus 387 ~ 387 (406)
T 2gek_A 387 G 387 (406)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-43 Score=319.86 Aligned_cols=349 Identities=16% Similarity=0.162 Sum_probs=251.8
Q ss_pred CCcchhhhHhh-HhhhhcCCceeec--CCccccc-cCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cC
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAH--DHCFKET-KDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EK 76 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~--~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (390)
.||+++++.++ ++|.++||+|+++ ....... ....+.. .+.......... .....+.. +.. ....+++ .+
T Consensus 52 ~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~-~~~-~~~~~l~~~~ 126 (416)
T 2x6q_A 52 GGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHN-ALQGNESLKLTE--EMKELYLN-VNR-ENSKFIDLSS 126 (416)
T ss_dssp SSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHHHHHHHHH-HHTTCCSCCCCH--HHHHHHHH-HHH-HHHHSSCGGG
T ss_pred CCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchhhhhcccce-eecccccccccH--HHHHHHHH-HHH-HHHHHHhhcC
Confidence 59999999999 9999999999876 2111000 0000000 000000000000 00111111 111 1122445 79
Q ss_pred CCEEEEcccccchhHHHhhc-ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEE-EccHhHHHHHHHHh
Q psy12587 77 PDLVFCDLVSICIPILQAKQ-FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIV-VNSEFTKSVVQATF 154 (390)
Q Consensus 77 ~Dvi~~~~~~~~~~~~~~~~-~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii-~~s~~~~~~~~~~~ 154 (390)
||+||+|++..........+ +|+|+++|+...... .. .... ....+.++|.++ ++|+..++ .
T Consensus 127 ~Dvv~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~------~~----~~~~-~~~~~~~~~~~i~~~s~~~~~----~- 190 (416)
T 2x6q_A 127 FDYVLVHDPQPAALIEFYEKKSPWLWRCHIDLSSPN------RE----FWEF-LRRFVEKYDRYIFHLPEYVQP----E- 190 (416)
T ss_dssp SSEEEEESSTTGGGGGGSCCCSCEEEECCSCCSSCC------HH----HHHH-HHHHHTTSSEEEESSGGGSCT----T-
T ss_pred CCEEEEeccchhhHHHHHHhcCCEEEEEccccCCcc------HH----HHHH-HHHHHHhCCEEEEechHHHHh----h-
Confidence 99999998654433332222 899999997533210 01 1112 234456777766 56654433 2
Q ss_pred ccCCCCceeecCCCCCCCCCCCCCc-----cchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhccccccc
Q psy12587 155 RSLDHKCLDILYPSVYTEGLEKTTP-----EPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKT 229 (390)
Q Consensus 155 ~~~~~~~~~vi~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~ 229 (390)
++..++.++|||+|...+.+... ...++.++ ...+.++++++|++.+.||++.+++|+..+.++.|+
T Consensus 191 --~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~--~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~---- 262 (416)
T 2x6q_A 191 --LDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFD--VDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPG---- 262 (416)
T ss_dssp --SCTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTT--CCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTT----
T ss_pred --CCccceEEeCCCCChhhhcccccChhhHHHHHHHhC--CCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCC----
Confidence 22468999999999876653221 22344443 223678899999999999999999999999988875
Q ss_pred ceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCC---hHHHHHHHHhcceEEeCCCCCCCCccHHhhhhc
Q psy12587 230 HVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPS---DAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFC 306 (390)
Q Consensus 230 ~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~---~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~ 306 (390)
++|+|+|+++.. +..+.+.++++++++++.++|.|+|+++ ++++.++|+.||++++||..|+||++++|||+|
T Consensus 263 -~~l~i~G~g~~~---~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~ 338 (416)
T 2x6q_A 263 -VQLLLVGVMAHD---DPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWK 338 (416)
T ss_dssp -CEEEEEECCCTT---CHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHT
T ss_pred -eEEEEEecCccc---chhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHc
Confidence 999999998753 1234477888999999989999999654 788999999999999999999999999999999
Q ss_pred CCCEEEecCCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhh
Q psy12587 307 KRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNML 385 (390)
Q Consensus 307 G~pvi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
|+|||+++.++.+|++.++.+|++++ |+++++++|.+++++++ .++++++++++.+.++|+|+.+++++.++|++++
T Consensus 339 G~PvI~~~~~g~~e~i~~~~~g~l~~-d~~~la~~i~~ll~~~~-~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 339 GKPVIGRAVGGIKFQIVDGETGFLVR-DANEAVEVVLYLLKHPE-VSKEMGAKAKERVRKNFIITKHMERYLDILNSLG 415 (416)
T ss_dssp TCCEEEESCHHHHHHCCBTTTEEEES-SHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred CCCEEEccCCCChhheecCCCeEEEC-CHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999 99999999999999998 9999999999999889999999999999999876
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=317.27 Aligned_cols=290 Identities=14% Similarity=0.166 Sum_probs=221.2
Q ss_pred CCCEEEEcccccchhHHHhh----------cccEEEEeecCCccccchhhhh----------hh--hc-------ccchh
Q psy12587 76 KPDLVFCDLVSICIPILQAK----------QFKVLFYCHYPDQLLSKQGSFL----------KS--IY-------RFPLN 126 (390)
Q Consensus 76 ~~Dvi~~~~~~~~~~~~~~~----------~~~~v~~~h~~~~~~~~~~~~~----------~~--~~-------~~~~~ 126 (390)
.+||+|+|+|.+++....+. ++|+|+|+|+............ .. .. ..-.-
T Consensus 153 ~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (536)
T 3vue_A 153 EDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKI 232 (536)
T ss_dssp SCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEE
T ss_pred CCEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccch
Confidence 46788899987765443321 3899999998643211100000 00 00 00011
Q ss_pred hHHHHHhcCcceEEEccHhHHHHHHHHhcc-------CCCCceeecCCCCCCCCCCCCCccc------------------
Q psy12587 127 KLEEWTTCKADKIVVNSEFTKSVVQATFRS-------LDHKCLDILYPSVYTEGLEKTTPEP------------------ 181 (390)
Q Consensus 127 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~-------~~~~~~~vi~~~~~~~~~~~~~~~~------------------ 181 (390)
.+++..+..||.|+++|+..++.+.+.++. .+..++.+|+||+|.+.+.+.....
T Consensus 233 n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k 312 (536)
T 3vue_A 233 NWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNK 312 (536)
T ss_dssp EHHHHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHH
T ss_pred hHHHHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHH
Confidence 355777889999999999999998875431 2346899999999999887743211
Q ss_pred --hhhhcCCCC-CCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHH
Q psy12587 182 --IENVLNPLP-GKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVK 258 (390)
Q Consensus 182 --~~~~~~~l~-~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~ 258 (390)
+++.++ ++ +.+.++|+++||+.++||++.+++|+.++.++ +.+++++|.|+. .+...++....
T Consensus 313 ~~l~~~~g-l~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~-------~~~l~l~G~G~~------~~~~~~~~~~~ 378 (536)
T 3vue_A 313 EALQAEAG-LPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQE-------DVQIVLLGTGKK------KFEKLLKSMEE 378 (536)
T ss_dssp HHHHHHTT-SCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTS-------SCEEEEECCBCH------HHHHHHHHHHH
T ss_pred HHHHHhcC-CCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhh-------CCeEEEEeccCc------hHHHHHHHHHh
Confidence 122222 22 24678999999999999999999999999775 367889998864 33355666666
Q ss_pred HcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceecCccee---------
Q psy12587 259 KLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGF--------- 329 (390)
Q Consensus 259 ~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~--------- 329 (390)
.+ ++++.+.+..+.+++..+|+.||++++||.+|+||++++|||+||+|||+|+.||++|++.++.+|+
T Consensus 379 ~~--~~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g 456 (536)
T 3vue_A 379 KY--PGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDC 456 (536)
T ss_dssp HS--TTTEEEECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCT
T ss_pred hc--CCceEEEEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCce
Confidence 55 4789999999999999999999999999999999999999999999999999999999999999998
Q ss_pred -eecC-CHHHHHHHHHHHhc--CChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhh
Q psy12587 330 -LCES-NEEAFAKAMKKIVD--NDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNML 385 (390)
Q Consensus 330 -~~~~-~~~~l~~~i~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
++++ |+++++++|.++++ +.+ .++++.+++ +.++|||++.+++|.++|+++.
T Consensus 457 ~l~~~~d~~~la~ai~ral~~~~~~-~~~~~~~~a---m~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 457 KVVEPSDVKKVAATLKRAIKVVGTP-AYEEMVRNC---MNQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHTTSH-HHHHHHHHH---HHSCCSSHHHHHHHHHHHHTTC
T ss_pred eEECCCCHHHHHHHHHHHHHhcCcH-HHHHHHHHH---HHhcCCHHHHHHHHHHHHHHhh
Confidence 6677 89999999998876 555 677776665 3468999999999999999874
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-42 Score=316.03 Aligned_cols=343 Identities=13% Similarity=0.168 Sum_probs=254.8
Q ss_pred CCcchhhhHhh-HhhhhcCCceeec--CCccccccCCCcceEEeccccccccch-hhHHHHHHHHHHHHHHHHHHhh-cC
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAH--DHCFKETKDGTLPVKVIGDWLPRNIFG-KFYALCMYLRMIVIALYVAWYS-EK 76 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (390)
.||+++++..| ++|.++ |+|+++ ... ....................... ........ . ..++ .+
T Consensus 13 ~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--------~-~~l~~~~ 81 (413)
T 3oy2_A 13 PSGYGRVMRAIVPRISKA-HEVIVFGIHAF-GRSVHANIEEFDAQTAEHVRGLNEQGFYYSGL--------S-EFIDVHK 81 (413)
T ss_dssp CSHHHHHHHHHHHHHTTT-SEEEEEEESCC-SCCSCSSSEEEEHHHHHHHTTCCSTTCCHHHH--------H-HHHHHHC
T ss_pred CCCHHHHHHHHHHHHHhc-CCeEEEeecCC-CcccccccccCCccccccccccccccchHHHH--------H-HHHHhcC
Confidence 59999999999 999999 999988 111 00000000000000000000000 00000000 1 1234 89
Q ss_pred CCEEEEcccccchh--HHHhhcc----cEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcc--eEEEccHhHHH
Q psy12587 77 PDLVFCDLVSICIP--ILQAKQF----KVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKAD--KIVVNSEFTKS 148 (390)
Q Consensus 77 ~Dvi~~~~~~~~~~--~~~~~~~----~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad--~ii~~s~~~~~ 148 (390)
||+||+|.+..... +....+. +++...|....... ...+++++++| .++++|+..++
T Consensus 82 ~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~ii~~S~~~~~ 146 (413)
T 3oy2_A 82 PDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIR---------------ENLWWIFSHPKVVGVMAMSKCWIS 146 (413)
T ss_dssp CSEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBSCC---------------GGGGGGGGCTTEEEEEESSTHHHH
T ss_pred CCEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchhhH---------------HHHHHHHhccCCceEEEcCHHHHH
Confidence 99999996533222 2223333 44555554322110 11256678888 99999999999
Q ss_pred HHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCC-CCCCeEEEEeecccccCCHHHHHHHHHHHHhhccccc
Q psy12587 149 VVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLP-GKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEM 227 (390)
Q Consensus 149 ~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~ 227 (390)
.+.+. + . ..++.++|||+|.+.+. ..++.++ ++ ..+.++|+++|++.+.||++.+++|+..+.++.++
T Consensus 147 ~~~~~-~-~-~~~~~vi~ngvd~~~~~-----~~~~~~~-~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~-- 215 (413)
T 3oy2_A 147 DICNY-G-C-KVPINIVSHFVDTKTIY-----DARKLVG-LSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPD-- 215 (413)
T ss_dssp HHHHT-T-C-CSCEEECCCCCCCCCCT-----THHHHTT-CGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTT--
T ss_pred HHHHc-C-C-CCceEEeCCCCCHHHHH-----HHHHhcC-CCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhCCC--
Confidence 99984 3 3 57999999999998772 2333332 11 12678999999999999999999999999988885
Q ss_pred ccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCc-------EEEecCCChHHHHHHHHhcceEEeCCCCCCCCccH
Q psy12587 228 KTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDN-------VLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVP 300 (390)
Q Consensus 228 ~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~-------v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~ 300 (390)
++|+|+|+++.... ..+.+.+++++++++++++ +.+.|+++++++.++|+.||++++||..|+||+++
T Consensus 216 ---~~l~ivG~g~~~~~--~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~ 290 (413)
T 3oy2_A 216 ---AKVRFLCNSHHESK--FDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCS 290 (413)
T ss_dssp ---CCEEEEEECCTTCS--CCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHH
T ss_pred ---cEEEEEeCCcccch--hhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHH
Confidence 99999998875321 1234788899999999886 88889999999999999999999999999999999
Q ss_pred HhhhhcCCCEEEecCCCcccceecCcc---------------ee--eecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHH
Q psy12587 301 IEAMFCKRPVIAVNSGGPKESVVDGRT---------------GF--LCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFN 362 (390)
Q Consensus 301 ~Ea~a~G~pvi~~~~~~~~e~i~~~~~---------------g~--~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~ 362 (390)
+|||+||+|||+|+.++.+|++.++.+ |+ ++++ |+++++++| +++++++ .++++++++++
T Consensus 291 lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~~~~-~~~~~~~~a~~ 368 (413)
T 3oy2_A 291 AEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFKDEK-NRKEYGKRVQD 368 (413)
T ss_dssp HHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTTSHH-HHHHHHHHHHH
T ss_pred HHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHhcCHH-HHHHHHHHHHH
Confidence 999999999999999999999998887 88 9988 999999999 9999998 99999999999
Q ss_pred HHhhhcCHHHHHHHHHHHHHhhhhhc
Q psy12587 363 RFNEKFSFQAFSIQLNTIVNNMLDKK 388 (390)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (390)
.+.++|+|+.+++++.++|+++++++
T Consensus 369 ~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 369 FVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp HHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 99889999999999999999998765
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-42 Score=307.49 Aligned_cols=298 Identities=12% Similarity=0.050 Sum_probs=239.2
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCccccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cCCCE
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EKPDL 79 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dv 79 (390)
.||+++++.++ ++|.++||+|+++..........+ +.... . ..+. ....+++ .+||+
T Consensus 29 ~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~--~~~~~----~---~~~~------------~l~~~l~~~~~Dv 87 (342)
T 2iuy_A 29 YGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGRPG--LTVVP----A---GEPE------------EIERWLRTADVDV 87 (342)
T ss_dssp SCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCSTT--EEECS----C---CSHH------------HHHHHHHHCCCSE
T ss_pred CChHHHHHHHHHHHHHHcCCeEEEEecCCCCCCCCc--ceecc----C---CcHH------------HHHHHHHhcCCCE
Confidence 49999999999 999999999998822221111222 22221 1 1111 1112344 89999
Q ss_pred EEEcccccchhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHHHhccCCC
Q psy12587 80 VFCDLVSICIPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDH 159 (390)
Q Consensus 80 i~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~ 159 (390)
||+|.......+.+..++| |+++|+..... ..+|.++++|+..++.+.+ .
T Consensus 88 i~~~~~~~~~~~~~~~~~p-v~~~h~~~~~~-----------------------~~~d~ii~~S~~~~~~~~~------~ 137 (342)
T 2iuy_A 88 VHDHSGGVIGPAGLPPGTA-FISSHHFTTRP-----------------------VNPVGCTYSSRAQRAHCGG------G 137 (342)
T ss_dssp EEECSSSSSCSTTCCTTCE-EEEEECSSSBC-----------------------SCCTTEEESCHHHHHHTTC------C
T ss_pred EEECCchhhHHHHhhcCCC-EEEecCCCCCc-----------------------ccceEEEEcCHHHHHHHhc------C
Confidence 9999966554444445589 99999864321 0189999999999887765 3
Q ss_pred CceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCC
Q psy12587 160 KCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGY 239 (390)
Q Consensus 160 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~ 239 (390)
.++.++|||+|.+.+.+.... . .+...++++|++.+.||++.++++++.+ + ++|+|+|++
T Consensus 138 ~~~~vi~ngvd~~~~~~~~~~---------~-~~~~~i~~vG~~~~~Kg~~~li~a~~~~-----~-----~~l~i~G~g 197 (342)
T 2iuy_A 138 DDAPVIPIPVDPARYRSAADQ---------V-AKEDFLLFMGRVSPHKGALEAAAFAHAC-----G-----RRLVLAGPA 197 (342)
T ss_dssp TTSCBCCCCBCGGGSCCSTTC---------C-CCCSCEEEESCCCGGGTHHHHHHHHHHH-----T-----CCEEEESCC
T ss_pred CceEEEcCCCChhhcCccccc---------C-CCCCEEEEEeccccccCHHHHHHHHHhc-----C-----cEEEEEeCc
Confidence 689999999998877654321 1 2445789999999999999999999987 2 889999998
Q ss_pred CCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCC----------CCCCCccHHhhhhcCCC
Q psy12587 240 DPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPS----------NEHFGIVPIEAMFCKRP 309 (390)
Q Consensus 240 ~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~----------~e~~~~~~~Ea~a~G~p 309 (390)
+.. +.+++++++++ ++|.|+|+++++++.++|+.||++++||. .|++|++++|||+||+|
T Consensus 198 ~~~--------~~l~~~~~~~~--~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~P 267 (342)
T 2iuy_A 198 WEP--------EYFDEITRRYG--STVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTP 267 (342)
T ss_dssp CCH--------HHHHHHHHHHT--TTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCC
T ss_pred ccH--------HHHHHHHHHhC--CCEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCC
Confidence 765 77888888887 79999999999999999999999999999 79999999999999999
Q ss_pred EEEecCCCcccceec--CcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhhh
Q psy12587 310 VIAVNSGGPKESVVD--GRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDK 387 (390)
Q Consensus 310 vi~~~~~~~~e~i~~--~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (390)
||+++.++..|++.+ +.+|+++++|+++++++|.++++ ++++++.+.++|+|+.+++++.++|++++++
T Consensus 268 vI~s~~~~~~e~~~~~~~~~g~~~~~d~~~l~~~i~~l~~---------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 338 (342)
T 2iuy_A 268 VVGTGNGCLAEIVPSVGEVVGYGTDFAPDEARRTLAGLPA---------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAG 338 (342)
T ss_dssp EEECCTTTHHHHGGGGEEECCSSSCCCHHHHHHHHHTSCC---------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTT
T ss_pred EEEcCCCChHHHhcccCCCceEEcCCCHHHHHHHHHHHHH---------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHcc
Confidence 999999999999999 88999987799999999999876 4677788888999999999999999999887
Q ss_pred cC
Q psy12587 388 KT 389 (390)
Q Consensus 388 ~~ 389 (390)
.+
T Consensus 339 ~~ 340 (342)
T 2iuy_A 339 AT 340 (342)
T ss_dssp CC
T ss_pred CC
Confidence 54
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=282.62 Aligned_cols=268 Identities=13% Similarity=0.038 Sum_probs=197.7
Q ss_pred cCCCEEEEcccccchhHHHh----------hcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcc--eEEEc
Q psy12587 75 EKPDLVFCDLVSICIPILQA----------KQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKAD--KIVVN 142 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~~~----------~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad--~ii~~ 142 (390)
.+||+||++.+.....+... .+.|.++.+|+.+....... ....+.+..++.++ .++++
T Consensus 131 ~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~vi~~ 201 (413)
T 2x0d_A 131 AKHDIFIATAWWTAYAAQRIVSWQSDTYGIPPNKILYIIQDFEPGFYQWS---------SQYVLAESTYKYRGPQIAVFN 201 (413)
T ss_dssp CTTEEEEECSHHHHHHHHHHHHHHHHHHTCCCCCEEEEECSCGGGGSCSS---------HHHHHHHHTTSCCSCEEEEEE
T ss_pred CCCCEEEEehHHHHHHHHHhhhhhhhhcccccCcEEEEEeechhhcCccC---------hHHHHHHHHhccCCceEEEEc
Confidence 67999999987655444333 13577877776543211110 01233455666665 58999
Q ss_pred cHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecc-cccCCHHHHHHHHHHHHh
Q psy12587 143 SEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRY-ERKKNLELAIYSLNSLRS 221 (390)
Q Consensus 143 s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~-~~~K~~~~ll~a~~~l~~ 221 (390)
|+.+++.+.+. +.+..++.++|||+|.+.+..... ...+...++++||+ .+.||++.+++|++.+.+
T Consensus 202 S~~~~~~l~~~--g~~~~~~~~i~~g~d~~~~~~~~~----------~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~ 269 (413)
T 2x0d_A 202 SELLKQYFNNK--GYNFTDEYFFQPKINTTLKNYIND----------KRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQ 269 (413)
T ss_dssp SHHHHHHHHHH--TCCCSEEEEECCCCCHHHHTTTTS----------CCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHc--CCCCCceEEeCCCcCchhhccccc----------ccCCCCEEEEEecCchhccCHHHHHHHHHHHHH
Confidence 99999999885 332467899999998765432110 11244567888996 688999999999999987
Q ss_pred hcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHH
Q psy12587 222 RLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPI 301 (390)
Q Consensus 222 ~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~ 301 (390)
+.|+ ..+++|+++|+++.. .++++.++|.|+|+++.+++.++|+.||++++||..|+||++++
T Consensus 270 ~~~~--~~~~~l~ivG~~~~~---------------~~l~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~l 332 (413)
T 2x0d_A 270 KYDR--SNEWKIISVGEKHKD---------------IALGKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPL 332 (413)
T ss_dssp HCTT--GGGCEEEEEESCCCC---------------EEEETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHH
T ss_pred hCCC--CCceEEEEEcCCchh---------------hhcCCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHH
Confidence 7651 003899999988653 24566789999999999999999999999999999999999999
Q ss_pred hhhhcCCCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHH
Q psy12587 302 EAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTI 380 (390)
Q Consensus 302 Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
||||||+|||+++ +|..|++.++.+|+++++ |+++++++|.++++|++ .+++ ++++.+ +.|+|+...++ .+.
T Consensus 333 EAmA~G~PVV~~~-~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~-~~~~---~~~~~~-~~~~W~~~~~~-~~~ 405 (413)
T 2x0d_A 333 EMAHFGLRVITNK-YENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFN-NRDV---DKKESS-NMMFYINEFNE-FSF 405 (413)
T ss_dssp HHHHTTCEEEEEC-BTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC-----------CCB-SCGGGCCCC----TT
T ss_pred HHHhCCCcEEEeC-CCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHH-HHHH---hHHHHH-HhCCHHHHHHH-HHH
Confidence 9999999999955 567899999999999998 99999999999999998 7666 566665 68999999877 667
Q ss_pred HHhhhhh
Q psy12587 381 VNNMLDK 387 (390)
Q Consensus 381 ~~~~~~~ 387 (390)
|+++..+
T Consensus 406 ~~~l~~~ 412 (413)
T 2x0d_A 406 IKEIEEK 412 (413)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 7776543
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=261.66 Aligned_cols=245 Identities=13% Similarity=0.093 Sum_probs=191.8
Q ss_pred cCCCEEEEcccccch--hHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHH
Q psy12587 75 EKPDLVFCDLVSICI--PILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQA 152 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~--~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~ 152 (390)
.++|+||.+...... .+.+..++|++++.|+.+..... ........+++.+++.+|.++++|+..++.+.+
T Consensus 123 ~~~DvIh~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~-------~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~ 195 (406)
T 2hy7_A 123 RESDVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLSTI-------NVASYIEREFDRVAPTLDVIALVSPAMAAEVVS 195 (406)
T ss_dssp HHCSEEEEESSGGGGGHHHHHHHCTTSEEEEEESSCHHHH-------TCCHHHHHHHHHHGGGCSEEEESCGGGGGGCSC
T ss_pred cCCCEEEECCchHHHHHHHHHHhCCCEEEEEeccchhhcc-------cccHHHHHHHHHHHHhCCEEEEcCHHHHHHHHh
Confidence 479999955433333 34455569999999976431100 011223466788899999999999998876654
Q ss_pred HhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceE
Q psy12587 153 TFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVK 232 (390)
Q Consensus 153 ~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~ 232 (390)
. . ++.++|||+|.+.+.+.... +.++.++++|+|++.+.||+ +..+.+..++ ++
T Consensus 196 ~-----~-~i~vipngvd~~~f~~~~~~---------~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~~~-----~~ 249 (406)
T 2hy7_A 196 R-----D-NVFHVGHGVDHNLDQLGDPS---------PYAEGIHAVAVGSMLFDPEF------FVVASKAFPQ-----VT 249 (406)
T ss_dssp S-----T-TEEECCCCBCTTHHHHHCSC---------SCCSSEEEEEECCTTBCHHH------HHHHHHHCTT-----EE
T ss_pred c-----C-CEEEEcCCcChHhcCccccc---------ccCCCcEEEEEeccccccCH------HHHHHHhCCC-----eE
Confidence 2 2 89999999998776542211 22244789999999999998 3444445564 99
Q ss_pred EEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhh-------h
Q psy12587 233 LVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAM-------F 305 (390)
Q Consensus 233 l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~-------a 305 (390)
|+|+|+|+ ++++++.++|.|+|+++++++..+|+.||++++||..|++|++++||| |
T Consensus 250 l~ivG~g~----------------~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla 313 (406)
T 2hy7_A 250 FHVIGSGM----------------GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDF 313 (406)
T ss_dssp EEEESCSS----------------CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHH
T ss_pred EEEEeCch----------------HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhh
Confidence 99999874 345677899999999999999999999999999999999999999999 9
Q ss_pred cCCCEEEecCCCcccceecCcceee-ecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHH--H
Q psy12587 306 CKRPVIAVNSGGPKESVVDGRTGFL-CES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTI--V 381 (390)
Q Consensus 306 ~G~pvi~~~~~~~~e~i~~~~~g~~-~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 381 (390)
||+|||+|+. +.++.+|++ +++ |+++++++|.+++++++ . ...++|+|+..++++.++ |
T Consensus 314 ~G~PVIas~~------v~~~~~G~l~v~~~d~~~la~ai~~ll~~~~-~----------~~~~~~sw~~~a~~~~~~~~y 376 (406)
T 2hy7_A 314 FGLPAVCPNA------VVGPYKSRFGYTPGNADSVIAAITQALEAPR-V----------RYRQCLNWSDTTDRVLDPRAY 376 (406)
T ss_dssp HTCCEEEEGG------GTCSCSSEEEECTTCHHHHHHHHHHHHHCCC-C----------CCSCCCBHHHHHHHHHCGGGS
T ss_pred CCCcEEEehh------cccCcceEEEeCCCCHHHHHHHHHHHHhCcc-h----------hhhhcCCHHHHHHHHHHhhcc
Confidence 9999999997 567789999 998 99999999999999876 1 234789999999999999 8
Q ss_pred Hhhh
Q psy12587 382 NNML 385 (390)
Q Consensus 382 ~~~~ 385 (390)
+++.
T Consensus 377 ~~~~ 380 (406)
T 2hy7_A 377 PETR 380 (406)
T ss_dssp GGGB
T ss_pred cccC
Confidence 7654
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=253.86 Aligned_cols=322 Identities=9% Similarity=-0.043 Sum_probs=226.3
Q ss_pred CCcchhhhHhh-HhhhhcCCceeec--CCc-c-ccccCCCcceEEecccc-cccc-chhhHHHHHHHHHHHHHHHHHHhh
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAH--DHC-F-KETKDGTLPVKVIGDWL-PRNI-FGKFYALCMYLRMIVIALYVAWYS 74 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~--~~~-~-~~~~~~~~~i~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 74 (390)
.||.++.+..| ++|.++||+|+++ ... . ......++.+..++... .... ...+.......... .. ...+++
T Consensus 16 ~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-l~~~l~ 93 (364)
T 1f0k_A 16 TGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAW-RQ-ARAIMK 93 (364)
T ss_dssp SHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHHHH-HH-HHHHHH
T ss_pred CccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCccCcCccHHHHHHHHHHHHHH-HH-HHHHHH
Confidence 47888999999 9999999999988 221 1 11222355555543211 1100 01111111111111 11 123455
Q ss_pred -cCCCEEEEcccccch---hHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHH
Q psy12587 75 -EKPDLVFCDLVSICI---PILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVV 150 (390)
Q Consensus 75 -~~~Dvi~~~~~~~~~---~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 150 (390)
.+||+||++.....+ .+.+..++|+|++.|+... ....+++.+.+|.+++.++..
T Consensus 94 ~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~-----------------~~~~~~~~~~~d~v~~~~~~~---- 152 (364)
T 1f0k_A 94 AYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIA-----------------GLTNKWLAKIATKVMQAFPGA---- 152 (364)
T ss_dssp HHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSC-----------------CHHHHHHTTTCSEEEESSTTS----
T ss_pred hcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCCC-----------------cHHHHHHHHhCCEEEecChhh----
Confidence 899999999754332 2334455999998886421 022355677899999988653
Q ss_pred HHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccc
Q psy12587 151 QATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTH 230 (390)
Q Consensus 151 ~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~ 230 (390)
++ ++.+++||++.+.+.+.. .+..++ ++.+...++++.|++.+.|+.+.+++++..+.+ +
T Consensus 153 ---~~-----~~~~i~n~v~~~~~~~~~---~~~~~~-~~~~~~~il~~~g~~~~~k~~~~li~a~~~l~~---~----- 212 (364)
T 1f0k_A 153 ---FP-----NAEVVGNPVRTDVLALPL---PQQRLA-GREGPVRVLVVGGSQGARILNQTMPQVAAKLGD---S----- 212 (364)
T ss_dssp ---SS-----SCEECCCCCCHHHHTSCC---HHHHHT-TCCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG---G-----
T ss_pred ---cC-----CceEeCCccchhhcccch---hhhhcc-cCCCCcEEEEEcCchHhHHHHHHHHHHHHHhcC---C-----
Confidence 22 678999999887654422 222332 233334566677899999999999999999865 2
Q ss_pred eE-EEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCC
Q psy12587 231 VK-LVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRP 309 (390)
Q Consensus 231 ~~-l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~p 309 (390)
++ ++++|+++. +++++.++++++ ++|.+.|++ +++..+|+.||++++|| + |++++|||+||+|
T Consensus 213 ~~~l~i~G~~~~---------~~l~~~~~~~~~-~~v~~~g~~--~~~~~~~~~ad~~v~~s---g-~~~~~EAma~G~P 276 (364)
T 1f0k_A 213 VTIWHQSGKGSQ---------QSVEQAYAEAGQ-PQHKVTEFI--DDMAAAYAWADVVVCRS---G-ALTVSEIAAAGLP 276 (364)
T ss_dssp EEEEEECCTTCH---------HHHHHHHHHTTC-TTSEEESCC--SCHHHHHHHCSEEEECC---C-HHHHHHHHHHTCC
T ss_pred cEEEEEcCCchH---------HHHHHHHhhcCC-CceEEecch--hhHHHHHHhCCEEEECC---c-hHHHHHHHHhCCC
Confidence 67 567888762 788888888887 579999999 45689999999999998 2 8999999999999
Q ss_pred EEEecCCCcc--------cceecCcceeeecC-C--HHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHH
Q psy12587 310 VIAVNSGGPK--------ESVVDGRTGFLCES-N--EEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLN 378 (390)
Q Consensus 310 vi~~~~~~~~--------e~i~~~~~g~~~~~-~--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (390)
||+++.++.+ ++++++ .|+++++ | +++++++|.++ |++ .++++++++++.+ +.|+|+.+++++.
T Consensus 277 vi~~~~~g~~~~q~~~~~~~~~~g-~g~~~~~~d~~~~~la~~i~~l--~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~ 351 (364)
T 1f0k_A 277 ALFVPFQHKDRQQYWNALPLEKAG-AAKIIEQPQLSVDAVANTLAGW--SRE-TLLTMAERARAAS-IPDATERVANEVS 351 (364)
T ss_dssp EEECCCCCTTCHHHHHHHHHHHTT-SEEECCGGGCCHHHHHHHHHTC--CHH-HHHHHHHHHHHTC-CTTHHHHHHHHHH
T ss_pred EEEeeCCCCchhHHHHHHHHHhCC-cEEEeccccCCHHHHHHHHHhc--CHH-HHHHHHHHHHHhh-ccCHHHHHHHHHH
Confidence 9999998764 455555 5999988 7 99999999999 777 8999999999887 6899999999999
Q ss_pred HHHHhhhhh
Q psy12587 379 TIVNNMLDK 387 (390)
Q Consensus 379 ~~~~~~~~~ 387 (390)
++|++.-+.
T Consensus 352 ~~y~~~~~~ 360 (364)
T 1f0k_A 352 RVARALEHH 360 (364)
T ss_dssp HHHTTC---
T ss_pred HHHHHHHhh
Confidence 999876544
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=252.54 Aligned_cols=310 Identities=13% Similarity=0.117 Sum_probs=214.1
Q ss_pred cCCCEEEEcccccchhHHHhh----cccEEEEeecCCcccc---chh-hhhhhhc----------cc--chhhHHHHHhc
Q psy12587 75 EKPDLVFCDLVSICIPILQAK----QFKVLFYCHYPDQLLS---KQG-SFLKSIY----------RF--PLNKLEEWTTC 134 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~~~~----~~~~v~~~h~~~~~~~---~~~-~~~~~~~----------~~--~~~~~~~~~~~ 134 (390)
.+|||+|+|.|..++.+..++ .+|+|+|+|+...... ... .+...+- .. -...+++..+.
T Consensus 180 ~~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~ 259 (725)
T 3nb0_A 180 QHAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAH 259 (725)
T ss_dssp SEEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHH
Confidence 569999999998877665554 2999999998632111 000 0000000 00 12356788899
Q ss_pred CcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCc---------cchhhh----cC-C--CCCCCCeEEE
Q psy12587 135 KADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTP---------EPIENV----LN-P--LPGKEDIVFL 198 (390)
Q Consensus 135 ~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~---------~~~~~~----~~-~--l~~~~~~~i~ 198 (390)
.||.|+++|+.+++++...++.. .+ .+||||+|.+.|.+... ..+.+. +. . ++.++.++++
T Consensus 260 ~AD~ITTVS~~yA~Ei~~Ll~r~-~d--~iIpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liif 336 (725)
T 3nb0_A 260 SADVFTTVSQITAFEAEHLLKRK-PD--GILPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFF 336 (725)
T ss_dssp HSSEEEESSHHHHHHHHHHTSSC-CS--EECCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEE
T ss_pred hCCEEEECCHHHHHHHHHHhcCC-CC--EEEcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEE
Confidence 99999999999999999876532 33 33999999999987521 111111 11 1 2233556677
Q ss_pred Eeeccc-ccCCHHHHHHHHHHHHhhccc--ccccceEEEEEcCCCCCCc----ch-------------------------
Q psy12587 199 SINRYE-RKKNLELAIYSLNSLRSRLSD--EMKTHVKLVVAGGYDPHNI----EN------------------------- 246 (390)
Q Consensus 199 ~~g~~~-~~K~~~~ll~a~~~l~~~~~~--~~~~~~~l~i~G~~~~~~~----~~------------------------- 246 (390)
.+||+. .+||++.+++|+.++...... ....-+.|+|+..+..... .+
T Consensus 337 ivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~ 416 (725)
T 3nb0_A 337 IAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDH 416 (725)
T ss_dssp EESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHH
Confidence 789999 789999999999998754210 0112477888776633210 00
Q ss_pred ----------------------------------------------------hHHHHHHHHHHHHcCCCCc------EEE
Q psy12587 247 ----------------------------------------------------VEYYKELGVLVKKLKLSDN------VLF 268 (390)
Q Consensus 247 ----------------------------------------------------~~y~~~~~~~~~~~~l~~~------v~~ 268 (390)
.+..+.+...++++++.+. |.|
T Consensus 417 ~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf 496 (725)
T 3nb0_A 417 AIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIF 496 (725)
T ss_dssp HHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEE
T ss_pred HhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEE
Confidence 0111334445566666555 445
Q ss_pred e-cCCChH------HHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceecC-------cceeeec--
Q psy12587 269 L-TSPSDA------AKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDG-------RTGFLCE-- 332 (390)
Q Consensus 269 ~-g~~~~~------e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~-------~~g~~~~-- 332 (390)
+ ++++.. ++.++|+.||++|+||.+|+||++++||||||+|||+|+.+|+++.+.++ .+|+++.
T Consensus 497 ~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~r 576 (725)
T 3nb0_A 497 HPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYIVDR 576 (725)
T ss_dssp CCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHHHTTEEEECC
T ss_pred eccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCChhhhhhccccccCCCCceEEEeCC
Confidence 4 667665 47899999999999999999999999999999999999999999998775 3698883
Q ss_pred -C-CHHHHHHHHHHHh----cCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhhhc
Q psy12587 333 -S-NEEAFAKAMKKIV----DNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKK 388 (390)
Q Consensus 333 -~-~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (390)
+ ++++++++|.+++ +.+.+.+..+++++++.+ +.|+|+..+++++++|++++.+.
T Consensus 577 d~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A-~~FSWe~iA~~Yl~~Ye~aL~~~ 637 (725)
T 3nb0_A 577 RFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALS-DLLDWKRMGLEYVKARQLALRRG 637 (725)
T ss_dssp SSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGG-GGGBHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHhhc
Confidence 3 5666555555444 434437888998888776 79999999999999999988653
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-31 Score=244.11 Aligned_cols=292 Identities=9% Similarity=0.112 Sum_probs=209.7
Q ss_pred cCCCEEEEcccccchhHHHh--h--cccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHH
Q psy12587 75 EKPDLVFCDLVSICIPILQA--K--QFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVV 150 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~~~--~--~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 150 (390)
..+|+||+|++...+....+ . +.|+++++|.+..... ..+.+ . ....+. ..+-.+|.+.+.+....+.+
T Consensus 122 ~~~DiV~vHdyhl~~l~~~lr~~~~~~~i~~~~H~pfp~~~----~~~~l-p-~~~~il-~~ll~~d~i~f~~~~~~~~f 194 (482)
T 1uqt_A 122 QDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPE----IFNAL-P-TYDTLL-EQLCDYDLLGFQTENDRLAF 194 (482)
T ss_dssp CTTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCHH----HHTTS-T-THHHHH-HHHTTSSEEEESSHHHHHHH
T ss_pred CCCCEEEEECchHHHHHHHHHHhCCCCcEEEEEcCCCCCHH----HHhhC-c-cHHHHH-HhhhccCeEEEECHHHHHHH
Confidence 56799999987544332222 2 3899999998633111 01100 0 001111 11335688877776655554
Q ss_pred HHH----------------hccCCCCceeecCCCCCCCCCCCCC-------ccchhhhcCCCCCCCCeEEEEeecccccC
Q psy12587 151 QAT----------------FRSLDHKCLDILYPSVYTEGLEKTT-------PEPIENVLNPLPGKEDIVFLSINRYERKK 207 (390)
Q Consensus 151 ~~~----------------~~~~~~~~~~vi~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~i~~~g~~~~~K 207 (390)
... +.+ ...++.++|||+|.+.|.+.. ...+++.++ ++++|+++||+.+.|
T Consensus 195 ~~~~~~~l~~~~~~~~~~~~~g-~~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~-----~~~vil~VgRl~~~K 268 (482)
T 1uqt_A 195 LDCLSNLTRVTTRSAKSHTAWG-KAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELK-----NVQNIFSVERLDYSK 268 (482)
T ss_dssp HHHHHHHSCEEEETTTEEEETT-EEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTT-----TCEEEEEECCBCGGG
T ss_pred HHHHHHHhCCccccCCeEEECC-eEEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhC-----CCEEEEEEeCCcccC
Confidence 421 111 135789999999988765321 123444442 568899999999999
Q ss_pred CHHHHHHHHHHHHhhcccccccceEEEEEcCCCCC-CcchhHHHHHHHHHHHHcC----CC--CcEE-EecCCChHHHHH
Q psy12587 208 NLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPH-NIENVEYYKELGVLVKKLK----LS--DNVL-FLTSPSDAAKIS 279 (390)
Q Consensus 208 ~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~-~~~~~~y~~~~~~~~~~~~----l~--~~v~-~~g~~~~~e~~~ 279 (390)
|++.+++|++.+.+++|+ ...++.|+++|..... .++...+.+++++++.+++ .. ..|. +.|.++.+++..
T Consensus 269 gi~~ll~A~~~ll~~~p~-~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ 347 (482)
T 1uqt_A 269 GLPERFLAYEALLEKYPQ-HHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMK 347 (482)
T ss_dssp CHHHHHHHHHHHHHHCGG-GTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHH
T ss_pred CHHHHHHHHHHHHHhCcc-ccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHH
Confidence 999999999999888763 1124789999974321 1112334566666665532 11 1355 578999999999
Q ss_pred HHHhcceEEeCCCCCCCCccHHhhhhcCC-----CEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHH
Q psy12587 280 LFKFCHCIIYTPSNEHFGIVPIEAMFCKR-----PVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNII 353 (390)
Q Consensus 280 ~~~~adv~v~ps~~e~~~~~~~Ea~a~G~-----pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~ 353 (390)
+|+.||++++||..||||++++||||||+ |+|+|+.+|..+.+ .+|+++++ |+++++++|.++++++.+++
T Consensus 348 ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l---~~g~lv~p~d~~~lA~ai~~lL~~~~~~r 424 (482)
T 1uqt_A 348 IFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL---TSALIVNPYDRDEVAAALDRALTMSLAER 424 (482)
T ss_dssp HHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC---TTSEEECTTCHHHHHHHHHHHHTCCHHHH
T ss_pred HHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh---CCeEEECCCCHHHHHHHHHHHHcCCHHHH
Confidence 99999999999999999999999999997 89999988887777 27899999 99999999999999775478
Q ss_pred HHHHHHHHHHHhhhcCHHHHHHHHHHHHHhh
Q psy12587 354 QQFSQFGFNRFNEKFSFQAFSIQLNTIVNNM 384 (390)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (390)
+++.+++++.+ +.|||+.+++++++.|+++
T Consensus 425 ~~~~~~~~~~v-~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 425 ISRHAEMLDVI-VKNDINHWQECFISDLKQI 454 (482)
T ss_dssp HHHHHHHHHHH-HHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHH-HhCCHHHHHHHHHHHHHhc
Confidence 89999999998 5799999999999999876
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-32 Score=258.44 Aligned_cols=314 Identities=10% Similarity=0.071 Sum_probs=227.4
Q ss_pred CCcchhhhHhh-Hh--hhhcCCceeec-CC-c-cc----cccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHH
Q psy12587 2 LGATARLTITA-TA--WGATGPRTTAH-DH-C-FK----ETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVA 71 (390)
Q Consensus 2 ~GG~~~~~~~l-~~--L~~~G~~V~~~-~~-~-~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (390)
.||+++++.++ +. +.+.||+|+++ .. . .. ...... .+..+. .. . ... ...
T Consensus 217 ~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~~-~---~~~---------l~~ 276 (568)
T 2vsy_A 217 AHPTGLLTVALFEALQRRQPDLQMHLFATSGDDGSTLRTRLAQAS-TLHDVT------AL-G---HLA---------TAK 276 (568)
T ss_dssp SSHHHHHHHHHHHHHHHHCTTEEEEEEESSCCCSCHHHHHHHHTS-EEEECT------TC-C---HHH---------HHH
T ss_pred cChHHHHHHHHHhhccCCcccEEEEEEECCCCCccHHHHHHHhcC-eEEECC------CC-C---HHH---------HHH
Confidence 47899999999 99 78889999888 21 1 00 011111 111110 00 0 111 112
Q ss_pred Hhh-cCCCEEEEccccc---chhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHH
Q psy12587 72 WYS-EKPDLVFCDLVSI---CIPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTK 147 (390)
Q Consensus 72 ~~~-~~~Dvi~~~~~~~---~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~ 147 (390)
+++ .+|||||.+.... .+........|+++++|+..... . ... ..+..+|.++++|+...
T Consensus 277 ~i~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~-----------~~~~~~d~~i~~s~~~~ 340 (568)
T 2vsy_A 277 HIRHHGIDLLFDLRGWGGGGRPEVFALRPAPVQVNWLAYPGTS----G-APW-----------MDYVLGDAFALPPALEP 340 (568)
T ss_dssp HHHHTTCSEEEECSSCTTCSSCHHHHTCCSSEEEEESSSSSCC----C-CTT-----------CCEEEECTTTSCTTTGG
T ss_pred HHHhCCCCEEEECCCCCCcchHHHHhcCCCceeEeeecCCccc----C-CCC-----------ceEEEECCCcCCccccc
Confidence 344 8999999865322 12222222378888877532110 0 000 01224788888887654
Q ss_pred HHHHHHhccCCCCceeecCCCCCCCCCCC-CCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccc
Q psy12587 148 SVVQATFRSLDHKCLDILYPSVYTEGLEK-TTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDE 226 (390)
Q Consensus 148 ~~~~~~~~~~~~~~~~vi~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~ 226 (390)
+ | .+++.++||.+.+....+ ......++.++ ++. +.+ ++++|++.+ ||++.+++++..+.++.|+
T Consensus 341 ~-----~----~~~i~~ipn~~~~~~~~~~~~~~~~r~~~~-~~~-~~~-v~~~g~~~~-K~~~~li~a~~~l~~~~~~- 406 (568)
T 2vsy_A 341 F-----Y----SEHVLRLQGAFQPSDTSRVVAEPPSRTQCG-LPE-QGV-VLCCFNNSY-KLNPQSMARMLAVLREVPD- 406 (568)
T ss_dssp G-----C----SSEEEECSSCSCCCCTTCCCCCCCCTGGGT-CCT-TSC-EEEECCCGG-GCCHHHHHHHHHHHHHCTT-
T ss_pred C-----C----cceeEcCCCcCCCCCCCCCCCCCCCccccC-CCC-CCE-EEEeCCccc-cCCHHHHHHHHHHHHhCCC-
Confidence 3 2 368999999654432211 12233445554 232 444 569999999 9999999999999888885
Q ss_pred cccceEEEEEc-CCCCCCcchhHHHHHHHHHHHHcCCC-CcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhh
Q psy12587 227 MKTHVKLVVAG-GYDPHNIENVEYYKELGVLVKKLKLS-DNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAM 304 (390)
Q Consensus 227 ~~~~~~l~i~G-~~~~~~~~~~~y~~~~~~~~~~~~l~-~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~ 304 (390)
++|+|+| +++.. +.+++.++++|+. ++|.|+|+++++++..+|+.||++|+||.+ |+|++++|||
T Consensus 407 ----~~l~i~G~~g~~~--------~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAm 473 (568)
T 2vsy_A 407 ----SVLWLLSGPGEAD--------ARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDAL 473 (568)
T ss_dssp ----CEEEEECCSTTHH--------HHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHH
T ss_pred ----cEEEEecCCHHHH--------HHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHH
Confidence 9999999 66443 8899999999998 999999999999999999999999999999 9999999999
Q ss_pred hcCCCEEE-------ecCC-------CcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHH--hhhc
Q psy12587 305 FCKRPVIA-------VNSG-------GPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRF--NEKF 368 (390)
Q Consensus 305 a~G~pvi~-------~~~~-------~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~--~~~~ 368 (390)
+||+|||+ |+.+ |.+|++.+ |+++++++|.++++|++ .++++++++++.+ .+.|
T Consensus 474 a~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~---------~~~~la~~i~~l~~~~~-~~~~~~~~~~~~~~~~~~f 543 (568)
T 2vsy_A 474 WTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA---------DDAAFVAKAVALASDPA-ALTALHARVDVLRRASGVF 543 (568)
T ss_dssp HTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS---------SHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHSSTT
T ss_pred hCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC---------CHHHHHHHHHHHhcCHH-HHHHHHHHHHHhhhcCCCC
Confidence 99999999 9998 88887743 89999999999999999 9999999999988 6899
Q ss_pred CHHHHHHHHHHHHHhhhhhc
Q psy12587 369 SFQAFSIQLNTIVNNMLDKK 388 (390)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~ 388 (390)
+|+.+++++.++|++++++.
T Consensus 544 ~~~~~~~~~~~~y~~~~~~~ 563 (568)
T 2vsy_A 544 HMDGFADDFGALLQALARRH 563 (568)
T ss_dssp CHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988754
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=5.9e-32 Score=244.56 Aligned_cols=283 Identities=12% Similarity=0.071 Sum_probs=203.9
Q ss_pred Hhh-cCCCEEEEccc-ccchh---HHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHH-hcCcceEEEccHh
Q psy12587 72 WYS-EKPDLVFCDLV-SICIP---ILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWT-TCKADKIVVNSEF 145 (390)
Q Consensus 72 ~~~-~~~Dvi~~~~~-~~~~~---~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ad~ii~~s~~ 145 (390)
+++ .+||+||+|+. ...++ +.+..++|++++.|+..... . +........+.+ .+.+|.++++|+.
T Consensus 81 ~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~d~ii~~s~~ 151 (384)
T 1vgv_A 81 ILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGD-L--------YSPWPEEANRTLTGHLAMYHFSPTET 151 (384)
T ss_dssp HHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCSC-T--------TSSTTHHHHHHHHHTTCSEEEESSHH
T ss_pred HHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccccc-c--------cCCCchHhhHHHHHhhccEEEcCcHH
Confidence 455 89999999874 22222 23444599998888643210 0 001111222333 5669999999999
Q ss_pred HHHHHHHHhccCCCCceeecCCCC-CCCCCCCCC-c------cchhhhcCCCCCCCCeEEEEeeccccc-CCHHHHHHHH
Q psy12587 146 TKSVVQATFRSLDHKCLDILYPSV-YTEGLEKTT-P------EPIENVLNPLPGKEDIVFLSINRYERK-KNLELAIYSL 216 (390)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~vi~~~~-~~~~~~~~~-~------~~~~~~~~~l~~~~~~~i~~~g~~~~~-K~~~~ll~a~ 216 (390)
.++.+.+. +.+.+++.+++||+ |...+.... . ...++.++.++.+++++++++||+.+. ||++.+++|+
T Consensus 152 ~~~~l~~~--g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~kg~~~li~a~ 229 (384)
T 1vgv_A 152 SRQNLLRE--NVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHAL 229 (384)
T ss_dssp HHHHHHHT--TCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCHHHHHHHHHH
T ss_pred HHHHHHHc--CCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEEEEeCCccccchHHHHHHHHH
Confidence 99988764 44467899999995 332221110 0 012222210123355788899999876 9999999999
Q ss_pred HHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCC
Q psy12587 217 NSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHF 296 (390)
Q Consensus 217 ~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~ 296 (390)
..+.++.++ +++++.++... .+.+.+++.+.. .++|.|+|+++..++.++|+.||++|+||
T Consensus 230 ~~l~~~~~~-----~~l~i~~g~~~------~~~~~l~~~~~~---~~~v~~~g~~~~~~~~~~~~~ad~~v~~S----- 290 (384)
T 1vgv_A 230 ADIATTHQD-----IQIVYPVHLNP------NVREPVNRILGH---VKNVILIDPQEYLPFVWLMNHAWLILTDS----- 290 (384)
T ss_dssp HHHHHHCTT-----EEEEEECCBCH------HHHHHHHHHHTT---CTTEEEECCCCHHHHHHHHHHCSEEEESS-----
T ss_pred HHHHhhCCC-----eEEEEEcCCCH------HHHHHHHHHhhc---CCCEEEeCCCCHHHHHHHHHhCcEEEECC-----
Confidence 999887775 88888633211 233555555432 36899999999899999999999999999
Q ss_pred CccHHhhhhcCCCEEEecC-CCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHH
Q psy12587 297 GIVPIEAMFCKRPVIAVNS-GGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSI 375 (390)
Q Consensus 297 ~~~~~Ea~a~G~pvi~~~~-~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (390)
|.+++|||+||+|||+++. ++..|++.++ +|+++++|+++++++|.++++|++ .+++|++++++.. +.|+|+.+++
T Consensus 291 g~~~lEA~a~G~PvI~~~~~~~~~e~v~~g-~g~lv~~d~~~la~~i~~ll~d~~-~~~~~~~~~~~~~-~~~~~~~i~~ 367 (384)
T 1vgv_A 291 GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGTDKQRIVEEVTRLLKDEN-EYQAMSRAHNPYG-DGQACSRILE 367 (384)
T ss_dssp STGGGTGGGGTCCEEEESSCCSCHHHHHHT-SEEEECSSHHHHHHHHHHHHHCHH-HHHHHHSSCCTTC-CSCHHHHHHH
T ss_pred cchHHHHHHcCCCEEEccCCCCcchhhhCC-ceEEeCCCHHHHHHHHHHHHhChH-HHhhhhhccCCCc-CCCHHHHHHH
Confidence 4558999999999999987 8899999887 999996699999999999999998 9999999888775 7899999999
Q ss_pred HHHHHHHhhhhh
Q psy12587 376 QLNTIVNNMLDK 387 (390)
Q Consensus 376 ~~~~~~~~~~~~ 387 (390)
.+.++++++.+.
T Consensus 368 ~~~~~~~~~~~~ 379 (384)
T 1vgv_A 368 ALKNNRISLGSH 379 (384)
T ss_dssp HHHHTCCCC---
T ss_pred HHHHHHHhhccc
Confidence 999988877654
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.98 E-value=6.4e-32 Score=243.53 Aligned_cols=273 Identities=13% Similarity=0.053 Sum_probs=200.3
Q ss_pred Hhh-cCCCEEEEcccc-cchh---HHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHH-HhcCcceEEEccHh
Q psy12587 72 WYS-EKPDLVFCDLVS-ICIP---ILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEW-TTCKADKIVVNSEF 145 (390)
Q Consensus 72 ~~~-~~~Dvi~~~~~~-~~~~---~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ad~ii~~s~~ 145 (390)
+++ .+||+||+|+.. ..+. +.+..++|+|++.|+.... . . +..+..++.+. +.+.+|.++++|+.
T Consensus 90 ~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~~----~-~----~~~~~~~~~~~~~~~~~d~ii~~s~~ 160 (375)
T 3beo_A 90 VMKEAKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGLRTW----D-K----YSPYPEEMNRQLTGVMADLHFSPTAK 160 (375)
T ss_dssp HHHHHCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCCCCS----C-T----TSSTTHHHHHHHHHHHCSEEEESSHH
T ss_pred HHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccccc----c-c----cCCChhHhhhhHHhhhhheeeCCCHH
Confidence 445 899999998742 2222 2344458998776653110 0 0 00111122333 34459999999999
Q ss_pred HHHHHHHHhccCCCCceeecCCC-CCCCCCCCC--CccchhhhcCCCCCCCCeEEEEeeccccc-CCHHHHHHHHHHHHh
Q psy12587 146 TKSVVQATFRSLDHKCLDILYPS-VYTEGLEKT--TPEPIENVLNPLPGKEDIVFLSINRYERK-KNLELAIYSLNSLRS 221 (390)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~vi~~~-~~~~~~~~~--~~~~~~~~~~~l~~~~~~~i~~~g~~~~~-K~~~~ll~a~~~l~~ 221 (390)
.++.+.+. +.+.+++.++||| +|...+.+. .....+..+ + +++++++++||+.+. ||++.+++|++.+.+
T Consensus 161 ~~~~~~~~--g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~---~-~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~ 234 (375)
T 3beo_A 161 SATNLQKE--NKDESRIFITGNTAIDALKTTVKETYSHPVLEKL---G-NNRLVLMTAHRRENLGEPMRNMFRAIKRLVD 234 (375)
T ss_dssp HHHHHHHT--TCCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTT---T-TSEEEEEECCCGGGTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHc--CCCcccEEEECChhHhhhhhhhhhhhhHHHHHhc---c-CCCeEEEEecccccchhHHHHHHHHHHHHHh
Confidence 99998774 4546789999999 776544332 112233322 2 356678899999875 999999999999988
Q ss_pred hcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHc-CCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccH
Q psy12587 222 RLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKL-KLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVP 300 (390)
Q Consensus 222 ~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~-~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~ 300 (390)
+.|+ +++++ |.++. .++++.++++ +..++|.|+|+++..++..+|+.||++++|| |.++
T Consensus 235 ~~~~-----~~~i~-~~g~~---------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~s-----g~~~ 294 (375)
T 3beo_A 235 KHED-----VQVVY-PVHMN---------PVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDS-----GGVQ 294 (375)
T ss_dssp HCTT-----EEEEE-ECCSC---------HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSEEEECC-----HHHH
T ss_pred hCCC-----eEEEE-eCCCC---------HHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcEEEECC-----CChH
Confidence 7775 88655 55543 3333333332 3236899999999999999999999999998 6679
Q ss_pred HhhhhcCCCEEEecC-CCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHH
Q psy12587 301 IEAMFCKRPVIAVNS-GGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNT 379 (390)
Q Consensus 301 ~Ea~a~G~pvi~~~~-~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
+|||+||+|||+++. ++.+|++.++ +|+++++|+++++++|.++++|++ .+++|++++++.. +.|+|+.+++.+.+
T Consensus 295 lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v~~d~~~la~~i~~ll~~~~-~~~~~~~~~~~~~-~~~~~~~i~~~~~~ 371 (375)
T 3beo_A 295 EEAPSLGVPVLVLRDTTERPEGIEAG-TLKLAGTDEETIFSLADELLSDKE-AHDKMSKASNPYG-DGRASERIVEAILK 371 (375)
T ss_dssp HHHHHHTCCEEECSSCCSCHHHHHTT-SEEECCSCHHHHHHHHHHHHHCHH-HHHHHCCCCCTTC-CSCHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEecCCCCCceeecCC-ceEEcCCCHHHHHHHHHHHHhChH-hHhhhhhcCCCCC-CCcHHHHHHHHHHH
Confidence 999999999999965 8899999887 999996699999999999999998 9999999888776 78999999999888
Q ss_pred HHH
Q psy12587 380 IVN 382 (390)
Q Consensus 380 ~~~ 382 (390)
+++
T Consensus 372 ~~~ 374 (375)
T 3beo_A 372 HFN 374 (375)
T ss_dssp HTT
T ss_pred Hhh
Confidence 764
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-29 Score=228.24 Aligned_cols=295 Identities=13% Similarity=0.080 Sum_probs=216.5
Q ss_pred CCCEEEEcccccchhHHHhh----cccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHH
Q psy12587 76 KPDLVFCDLVSICIPILQAK----QFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQ 151 (390)
Q Consensus 76 ~~Dvi~~~~~~~~~~~~~~~----~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 151 (390)
.-|+|++|++...+....+. ..++.+.+|-|.+.... ++.+- ...+.-....+-.+|.|.+.+...+..+.
T Consensus 149 ~~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~----f~~Lp-~~~r~ell~gll~~DligF~t~~y~~~Fl 223 (496)
T 3t5t_A 149 ADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADY----WRILP-KEIRTGILHGMLPATTIGFFADRWCRNFL 223 (496)
T ss_dssp SSCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHH----HTTSC-HHHHHHHHHHHTTSSEEEESSHHHHHHHH
T ss_pred CCCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHH----HhhCc-HhHHHHHHHHHHhCCEEEEecHHHHHHHH
Confidence 46899999977654433332 28999999976432111 11110 00011112335689999999998887765
Q ss_pred HHhc----cCC-------------CCceeecCCCCCCCCCCCCCc---cchhhhcCCCCCCCCeEEEEeecccccCCHHH
Q psy12587 152 ATFR----SLD-------------HKCLDILYPSVYTEGLEKTTP---EPIENVLNPLPGKEDIVFLSINRYERKKNLEL 211 (390)
Q Consensus 152 ~~~~----~~~-------------~~~~~vi~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ 211 (390)
+... +.+ ..++.++|+|||.+.|.+... ..+++.++ ++.+|+++||+.+.||++.
T Consensus 224 ~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~ 298 (496)
T 3t5t_A 224 ESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWAD-----GHRLVVHSGRTDPIKNAER 298 (496)
T ss_dssp HHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHT-----TSEEEEEEEESSGGGCHHH
T ss_pred HHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhC-----CceEEEEcccCccccCHHH
Confidence 5321 110 136789999999998876532 34455553 6788999999999999999
Q ss_pred HHHHHHHHHhhcccccccceEEEEEcCCCC-CCcchhHHHHHHHHHHHHcCC---CCcEEEecCCChHHHHHHHHhcceE
Q psy12587 212 AIYSLNSLRSRLSDEMKTHVKLVVAGGYDP-HNIENVEYYKELGVLVKKLKL---SDNVLFLTSPSDAAKISLFKFCHCI 287 (390)
Q Consensus 212 ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~-~~~~~~~y~~~~~~~~~~~~l---~~~v~~~g~~~~~e~~~~~~~adv~ 287 (390)
+|+|+ ++.+++|+ .. ++.|+++|.... ..++...+..++++++.+.+. ...|.|+|.++.+++..+|+.||++
T Consensus 299 lL~Af-~ll~~~P~-~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~ 375 (496)
T 3t5t_A 299 AVRAF-VLAARGGG-LE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLL 375 (496)
T ss_dssp HHHHH-HHHHHTSS-CT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEE
T ss_pred HHHHH-HHHHhCcc-cc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEE
Confidence 99999 98888875 11 367888874332 112234455666666665431 1169999999999999999999999
Q ss_pred EeCCCCCCCCccHHhhhhcC---CCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHH
Q psy12587 288 IYTPSNEHFGIVPIEAMFCK---RPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNR 363 (390)
Q Consensus 288 v~ps~~e~~~~~~~Ea~a~G---~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~ 363 (390)
++||..||||++++|||||| .|+|+|..+|..+.+ +.+|+++++ |+++++++|.++++++.++++++.++.++.
T Consensus 376 vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l--~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~ 453 (496)
T 3t5t_A 376 IFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVL--GEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDA 453 (496)
T ss_dssp EECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHH--GGGSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred EECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHHh--CCCEEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 99999999999999999997 899999999888887 347899999 999999999999999875888888899999
Q ss_pred HhhhcCHHHHHHHHHHHHHhhhh
Q psy12587 364 FNEKFSFQAFSIQLNTIVNNMLD 386 (390)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~ 386 (390)
+ ..++...+++.+++-+.....
T Consensus 454 V-~~~d~~~W~~~fl~~L~~~~~ 475 (496)
T 3t5t_A 454 A-RPWTLEAWVQAQLDGLAADHA 475 (496)
T ss_dssp H-TTCBHHHHHHHHHHHHHHHHH
T ss_pred H-HHCCHHHHHHHHHHHHhhccc
Confidence 8 789999999999998876643
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-31 Score=216.37 Aligned_cols=185 Identities=21% Similarity=0.291 Sum_probs=161.7
Q ss_pred cCCCCCCCCCC--CCC------ccchhhhcCCCCCCCCeEEEEeeccc-ccCCHHHHHHHHHHHH--hhcccccccceEE
Q psy12587 165 LYPSVYTEGLE--KTT------PEPIENVLNPLPGKEDIVFLSINRYE-RKKNLELAIYSLNSLR--SRLSDEMKTHVKL 233 (390)
Q Consensus 165 i~~~~~~~~~~--~~~------~~~~~~~~~~l~~~~~~~i~~~g~~~-~~K~~~~ll~a~~~l~--~~~~~~~~~~~~l 233 (390)
||||+|.+.|. +.. ....++.++ .. +..+|+++|++. +.||++.+++++..+. ++.++ ++|
T Consensus 2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~~--~~-~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~-----~~l 73 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGSRDERKKSLLSKFG--MD-EGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE-----MRF 73 (200)
T ss_dssp ---CCCTTTSSGGGSCSCHHHHHHHHHHHTT--CC-SCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGG-----EEE
T ss_pred CCCccChhhccccccccchhhHHHHHHHHcC--CC-CCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCC-----eEE
Confidence 79999999988 665 445666664 22 455899999999 9999999999999997 67665 999
Q ss_pred EEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEE-ecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEE
Q psy12587 234 VVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLF-LTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIA 312 (390)
Q Consensus 234 ~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~-~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~ 312 (390)
+++|.++. .+.+++++.+++++ +|.+ +|+++++++..+|+.||++++||..|++|++++|||+||+|||+
T Consensus 74 ~i~G~~~~------~~~~~l~~~~~~~~---~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~ 144 (200)
T 2bfw_A 74 IIIGKGDP------ELEGWARSLEEKHG---NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIA 144 (200)
T ss_dssp EEECCBCH------HHHHHHHHHHHHCT---TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEE
T ss_pred EEECCCCh------HHHHHHHHHHHhcC---CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEE
Confidence 99998762 24488889998886 8999 99999999999999999999999999999999999999999999
Q ss_pred ecCCCcccceecCcceeeecC-CHHHHHHHHHHHhc-CChhHHHHHHHHHHHHHhhhcC
Q psy12587 313 VNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVD-NDGNIIQQFSQFGFNRFNEKFS 369 (390)
Q Consensus 313 ~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~ 369 (390)
++.++..+++ ++.+|+++++ |+++++++|.++++ +++ .++++++++++.+.+ ||
T Consensus 145 ~~~~~~~e~~-~~~~g~~~~~~~~~~l~~~i~~l~~~~~~-~~~~~~~~a~~~~~~-fs 200 (200)
T 2bfw_A 145 SAVGGLRDII-TNETGILVKAGDPGELANAILKALELSRS-DLSKFRENCKKRAMS-FS 200 (200)
T ss_dssp ESCHHHHHHC-CTTTCEEECTTCHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHH-TC
T ss_pred eCCCChHHHc-CCCceEEecCCCHHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHh-cC
Confidence 9999999999 8899999998 99999999999999 998 999999999999866 75
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.3e-30 Score=202.60 Aligned_cols=162 Identities=19% Similarity=0.244 Sum_probs=141.1
Q ss_pred CeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCC
Q psy12587 194 DIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPS 273 (390)
Q Consensus 194 ~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~ 273 (390)
+++|+|+|++.+.||++.+++++..+++ .+ +++|+++|.++.. +.++++++++++ ++.+ |+++
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~-~~-----~~~l~i~G~g~~~--------~~~~~~~~~~~~--~v~~-g~~~ 64 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKY-KQ-----DIVLLLKGKGPDE--------KKIKLLAQKLGV--KAEF-GFVN 64 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTT-GG-----GEEEEEECCSTTH--------HHHHHHHHHHTC--EEEC-CCCC
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhcc-CC-----CeEEEEEeCCccH--------HHHHHHHHHcCC--eEEE-eecC
Confidence 5789999999999999999999999853 35 4999999998765 889999999986 8888 9999
Q ss_pred hHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCC-CEEE-ecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCCh
Q psy12587 274 DAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKR-PVIA-VNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDNDG 350 (390)
Q Consensus 274 ~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~-pvi~-~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~ 350 (390)
++++..+|+.||++++||..|++|++++|||+||+ |||+ ++.++..+++.++.+ ++++ |+++++++|.+++++++
T Consensus 65 ~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~~~~~ 142 (166)
T 3qhp_A 65 SNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERS--LFEPNNAKDLSAKIDWWLENKL 142 (166)
T ss_dssp HHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGG--EECTTCHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCce--EEcCCCHHHHHHHHHHHHhCHH
Confidence 99999999999999999999999999999999998 9999 567889999877644 6777 99999999999999998
Q ss_pred hHHHHHHHHHHHHHhhhcCHHHHHHH
Q psy12587 351 NIIQQFSQFGFNRFNEKFSFQAFSIQ 376 (390)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (390)
.++++++++++.+ ++|+|+.++++
T Consensus 143 -~~~~~~~~~~~~~-~~~s~~~~~~~ 166 (166)
T 3qhp_A 143 -ERERMQNEYAKSA-LNYTLENSVIQ 166 (166)
T ss_dssp -HHHHHHHHHHHHH-HHHC-------
T ss_pred -HHHHHHHHHHHHH-HHCChhhhhcC
Confidence 9999999999988 89999998763
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=214.47 Aligned_cols=296 Identities=10% Similarity=0.030 Sum_probs=203.9
Q ss_pred CCcchhhhHhh-HhhhhcCCceeec--CCcccc-ccC--CCcc--eEEeccccccccchhhHHHHHHHHHHHHHHHHHHh
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAH--DHCFKE-TKD--GTLP--VKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWY 73 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~--~~~~~~-~~~--~~~~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (390)
.+|..+.+..| ++|.++| +|.+. +....+ ... .++. +. + +.. ....+. .++
T Consensus 49 s~G~~~~~~~L~~~L~~~~-~v~v~~~~~~~~~~~~~~~~~v~~~~~-~----p~~---~~~~l~------------~~l 107 (374)
T 2xci_A 49 SIGEFNTFLPILKELKREH-RILLTYFSPRAREYLKTKSDFYDCLHP-L----PLD---NPFSVK------------RFE 107 (374)
T ss_dssp SHHHHHHHHHHHHHHHHHS-CEEEEESCGGGHHHHHTTGGGCSEEEE-C----CCS---SHHHHH------------HHH
T ss_pred CHHHHHHHHHHHHHHHhcC-CEEEEEcCCcHHHHHHHhcccccceeE-C----CCC---CHHHHH------------HHH
Confidence 45778899999 9999998 87544 211111 011 1222 11 1 111 111111 234
Q ss_pred h-cCCCEEEEcccccchh-HHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHH
Q psy12587 74 S-EKPDLVFCDLVSICIP-ILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQ 151 (390)
Q Consensus 74 ~-~~~Dvi~~~~~~~~~~-~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 151 (390)
+ .+||+|+++....... +....+ |+++..+.... ..+.+++++.+|.++++|+..++.+.
T Consensus 108 ~~~~pDiv~~~~~~~~~~~~~~~~~-p~~~~~~~~~~-----------------~~~~~~~~~~~d~ii~~S~~~~~~l~ 169 (374)
T 2xci_A 108 ELSKPKALIVVEREFWPSLIIFTKV-PKILVNAYAKG-----------------SLIEKILSKKFDLIIMRTQEDVEKFK 169 (374)
T ss_dssp HHHCCSEEEEESCCCCHHHHHHCCS-CEEEEEECCCC-----------------CHHHHHHHTTCSEEEESCHHHHHHHH
T ss_pred HHhCCCEEEEECccCcHHHHHHHhC-CEEEEEeecCc-----------------hHHHHHHHHhCCEEEECCHHHHHHHH
Confidence 4 8999999865332222 222223 76654332100 01456778899999999999999998
Q ss_pred HHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccce
Q psy12587 152 ATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHV 231 (390)
Q Consensus 152 ~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~ 231 (390)
+. +. . ++.++||+. +...... ...+ ..+++++.|+ ..||++.+++|++.+.++.|+ +
T Consensus 170 ~~--g~-~-ki~vi~n~~----f~~~~~~--~~~l------~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~-----~ 226 (374)
T 2xci_A 170 TF--GA-K-RVFSCGNLK----FICQKGK--GIKL------KGEFIVAGSI--HTGEVEIILKAFKEIKKTYSS-----L 226 (374)
T ss_dssp TT--TC-C-SEEECCCGG----GCCCCCS--CCCC------SSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTT-----C
T ss_pred Hc--CC-C-eEEEcCCCc----cCCCcCh--hhhh------cCCEEEEEeC--CCchHHHHHHHHHHHHhhCCC-----c
Confidence 75 44 3 899999973 1111100 1111 1245666665 458999999999999988875 9
Q ss_pred EEEEEcCCCCCCcchhHHHHHHHHHHHHcCCC--------CcEEEecCCChHHHHHHHHhcceEEeCCCC-CCCCccHHh
Q psy12587 232 KLVVAGGYDPHNIENVEYYKELGVLVKKLKLS--------DNVLFLTSPSDAAKISLFKFCHCIIYTPSN-EHFGIVPIE 302 (390)
Q Consensus 232 ~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~--------~~v~~~g~~~~~e~~~~~~~adv~v~ps~~-e~~~~~~~E 302 (390)
+|+|+|+++.. .++++++++++++. ++|.+.|.. .|+..+|+.||++++||.. |++|.+++|
T Consensus 227 ~lvivG~g~~~-------~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~--~dl~~~y~~aDv~vl~ss~~e~gg~~~lE 297 (374)
T 2xci_A 227 KLILVPRHIEN-------AKIFEKKARDFGFKTSFFENLEGDVILVDRF--GILKELYPVGKIAIVGGTFVNIGGHNLLE 297 (374)
T ss_dssp EEEEEESSGGG-------HHHHHHHHHHTTCCEEETTCCCSSEEECCSS--SCHHHHGGGEEEEEECSSSSSSCCCCCHH
T ss_pred EEEEECCCHHH-------HHHHHHHHHHCCCceEEecCCCCcEEEECCH--HHHHHHHHhCCEEEECCcccCCCCcCHHH
Confidence 99999987643 14788999998876 468887765 4568999999998887654 678999999
Q ss_pred hhhcCCCEEEe-cCCCcccceecC-cceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCH
Q psy12587 303 AMFCKRPVIAV-NSGGPKESVVDG-RTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSF 370 (390)
Q Consensus 303 a~a~G~pvi~~-~~~~~~e~i~~~-~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (390)
|||||+|||++ +.++.+|++.+. .+|.+++. |+++++++|.++++| + .+++|++++++.+.++++.
T Consensus 298 AmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d-~-~r~~mg~~ar~~~~~~~ga 366 (374)
T 2xci_A 298 PTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELLSV-K-KEIKVEEKSREIKGCYLEK 366 (374)
T ss_dssp HHTTTCCEEECSCCTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHHHS-C-CCCCHHHHHHHHHHHHHHH
T ss_pred HHHhCCCEEECCCccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH-H-HHHHHHHHHHHHHHhcccH
Confidence 99999999975 678889987653 47888877 999999999999999 8 9999999999998665443
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.95 E-value=7e-28 Score=192.94 Aligned_cols=150 Identities=33% Similarity=0.485 Sum_probs=135.5
Q ss_pred CCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHH--HcCCCCcEEEec
Q psy12587 193 EDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVK--KLKLSDNVLFLT 270 (390)
Q Consensus 193 ~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~--~~~l~~~v~~~g 270 (390)
++++|+|+|++.+.||++.++++++.+ + +++|+++|.++.. +++++.++ +++++++|.++|
T Consensus 22 ~~~~i~~~G~~~~~Kg~~~li~a~~~l----~-----~~~l~i~G~~~~~--------~~l~~~~~~~~~~l~~~v~~~g 84 (177)
T 2f9f_A 22 YGDFWLSVNRIYPEKRIELQLEVFKKL----Q-----DEKLYIVGWFSKG--------DHAERYARKIMKIAPDNVKFLG 84 (177)
T ss_dssp CCSCEEEECCSSGGGTHHHHHHHHHHC----T-----TSCEEEEBCCCTT--------STHHHHHHHHHHHSCTTEEEEE
T ss_pred CCCEEEEEeccccccCHHHHHHHHHhC----C-----CcEEEEEecCccH--------HHHHHHHHhhhcccCCcEEEeC
Confidence 667789999999999999999999988 3 3899999998875 67888888 778889999999
Q ss_pred CCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcCC
Q psy12587 271 SPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDND 349 (390)
Q Consensus 271 ~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~ 349 (390)
+++++++..+|+.||++++||..|++|++++|||+||+|||+++.++..+++.++.+|+++ + |+++++++|.++++++
T Consensus 85 ~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l~~~i~~l~~~~ 163 (177)
T 2f9f_A 85 SVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV-NADVNEIIDAMKKVSKNP 163 (177)
T ss_dssp SCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-CSCHHHHHHHHHHHHHCT
T ss_pred CCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEe-CCCHHHHHHHHHHHHhCH
Confidence 9999999999999999999999999999999999999999999999999999999999999 7 9999999999999998
Q ss_pred hhH-HHHHHHHHH
Q psy12587 350 GNI-IQQFSQFGF 361 (390)
Q Consensus 350 ~~~-~~~~~~~~~ 361 (390)
+ . +++++++++
T Consensus 164 ~-~~~~~~~~~a~ 175 (177)
T 2f9f_A 164 D-KFKKDCFRRAK 175 (177)
T ss_dssp T-TTHHHHHHHHH
T ss_pred H-HHHHHHHHHHh
Confidence 8 5 555554443
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.95 E-value=8.2e-27 Score=210.17 Aligned_cols=273 Identities=12% Similarity=0.045 Sum_probs=187.6
Q ss_pred Hhh-cCCCEEEEcccc-cch---hHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhH
Q psy12587 72 WYS-EKPDLVFCDLVS-ICI---PILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFT 146 (390)
Q Consensus 72 ~~~-~~~Dvi~~~~~~-~~~---~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~ 146 (390)
+++ .+||+||+|+.. ..+ .+++..++|++.+.++...+. ....+ ......+++.+.+|.++++|+..
T Consensus 86 ~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~s~~~ 157 (376)
T 1v4v_A 86 ALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRSGN-----LKEPF---PEEANRRLTDVLTDLDFAPTPLA 157 (376)
T ss_dssp HHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCCSC-----TTSST---THHHHHHHHHHHCSEEEESSHHH
T ss_pred HHHHcCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeCCCcccc-----ccCCC---chHHHHHHHHHHhceeeCCCHHH
Confidence 445 899999998642 222 233445589864333321110 00000 11123344556799999999999
Q ss_pred HHHHHHHhccCCCCceeecCCCC-CCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhccc
Q psy12587 147 KSVVQATFRSLDHKCLDILYPSV-YTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSD 225 (390)
Q Consensus 147 ~~~~~~~~~~~~~~~~~vi~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~ 225 (390)
++.+.+. +.+.+++.+++|+. |...+... ....++.+ + +++++++++||+...||++.+++|++.+.++.++
T Consensus 158 ~~~l~~~--g~~~~ki~vi~n~~~d~~~~~~~-~~~~~~~~---~-~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~ 230 (376)
T 1v4v_A 158 KANLLKE--GKREEGILVTGQTGVDAVLLAAK-LGRLPEGL---P-EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPH 230 (376)
T ss_dssp HHHHHTT--TCCGGGEEECCCHHHHHHHHHHH-HCCCCTTC---C-SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHc--CCCcceEEEECCchHHHHhhhhh-hhHHHHhc---C-CCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCC
Confidence 9998875 45467899999974 32211110 01111111 2 3567778899998888999999999999887775
Q ss_pred ccccceEEEEE-cCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhh
Q psy12587 226 EMKTHVKLVVA-GGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAM 304 (390)
Q Consensus 226 ~~~~~~~l~i~-G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~ 304 (390)
++++++ |.++ ...+.+++++.. .++|.++|+++..++..+|+.||++|+|| + |+ ++|||
T Consensus 231 -----~~lv~~~g~~~-------~~~~~l~~~~~~---~~~v~~~g~~g~~~~~~~~~~ad~~v~~S--~--g~-~lEA~ 290 (376)
T 1v4v_A 231 -----LTFVYPVHLNP-------VVREAVFPVLKG---VRNFVLLDPLEYGSMAALMRASLLLVTDS--G--GL-QEEGA 290 (376)
T ss_dssp -----SEEEEECCSCH-------HHHHHHHHHHTT---CTTEEEECCCCHHHHHHHHHTEEEEEESC--H--HH-HHHHH
T ss_pred -----eEEEEECCCCH-------HHHHHHHHHhcc---CCCEEEECCCCHHHHHHHHHhCcEEEECC--c--CH-HHHHH
Confidence 888876 6442 122556655432 36899999998889999999999999998 2 33 78999
Q ss_pred hcCCCEEEec-CCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHh
Q psy12587 305 FCKRPVIAVN-SGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNN 383 (390)
Q Consensus 305 a~G~pvi~~~-~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
+||+|||+++ .++..+++.++ +|++++.|+++++++|.++++|++ .+++|++++ +.|.+...++++.+.+.+
T Consensus 291 a~G~PvI~~~~~~~~~~~~~~g-~g~lv~~d~~~la~~i~~ll~d~~-~~~~~~~~~-----~~~~~~~~~~~i~~~i~~ 363 (376)
T 1v4v_A 291 ALGVPVVVLRNVTERPEGLKAG-ILKLAGTDPEGVYRVVKGLLENPE-ELSRMRKAK-----NPYGDGKAGLMVARGVAW 363 (376)
T ss_dssp HTTCCEEECSSSCSCHHHHHHT-SEEECCSCHHHHHHHHHHHHTCHH-HHHHHHHSC-----CSSCCSCHHHHHHHHHHH
T ss_pred HcCCCEEeccCCCcchhhhcCC-ceEECCCCHHHHHHHHHHHHhChH-hhhhhcccC-----CCCCCChHHHHHHHHHHH
Confidence 9999999974 68888887654 788884599999999999999988 888888533 455555666677777766
Q ss_pred hhh
Q psy12587 384 MLD 386 (390)
Q Consensus 384 ~~~ 386 (390)
+++
T Consensus 364 ~~~ 366 (376)
T 1v4v_A 364 RLG 366 (376)
T ss_dssp HTT
T ss_pred Hhc
Confidence 654
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.5e-25 Score=192.87 Aligned_cols=242 Identities=13% Similarity=-0.002 Sum_probs=175.7
Q ss_pred cCCCEEEEcccccc---h---hHHHhh--cccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhH
Q psy12587 75 EKPDLVFCDLVSIC---I---PILQAK--QFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFT 146 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~---~---~~~~~~--~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~ 146 (390)
.++|+|++++++.. + .+.+++ ++|+|+.+|+.++.... . .......|++++++||.|+++|+.+
T Consensus 73 ~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~~-----~---~~~~~~~E~~~y~~aD~Ii~~S~~~ 144 (339)
T 3rhz_A 73 RHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMFS-----G---NFYLMDRTIAYYNKADVVVAPSQKM 144 (339)
T ss_dssp CTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHCG-----G---GGGGHHHHHHHHTTCSEEEESCHHH
T ss_pred CCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhCc-----c---chhhHHHHHHHHHHCCEEEECCHHH
Confidence 89999999887531 1 222333 48999999987543211 1 1122347899999999999999999
Q ss_pred HHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccc
Q psy12587 147 KSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDE 226 (390)
Q Consensus 147 ~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~ 226 (390)
++.+.+. +.+..++.++++. +... +.+.. ...++++++|+|+++....+.. + .+
T Consensus 145 ~~~l~~~--G~~~~ki~~~~~~-~~~~--~~~~~---------~~~~~~~i~yaG~l~k~~~L~~-------l---~~-- 198 (339)
T 3rhz_A 145 IDKLRDF--GMNVSKTVVQGMW-DHPT--QAPMF---------PAGLKREIHFPGNPERFSFVKE-------W---KY-- 198 (339)
T ss_dssp HHHHHHT--TCCCSEEEECCSC-CCCC--CCCCC---------CCEEEEEEEECSCTTTCGGGGG-------C---CC--
T ss_pred HHHHHHc--CCCcCceeecCCC-CccC--ccccc---------ccCCCcEEEEeCCcchhhHHHh-------C---CC--
Confidence 9999885 4534566555432 2211 11000 1125678999999985322221 1 23
Q ss_pred cccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCC-------CCCCCcc
Q psy12587 227 MKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPS-------NEHFGIV 299 (390)
Q Consensus 227 ~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~-------~e~~~~~ 299 (390)
+++|+|+|+|+.. .++ +|.|+|+++.+|++.+++++|+.++... ...+|.+
T Consensus 199 ---~~~f~ivG~G~~~------------------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~K 256 (339)
T 3rhz_A 199 ---DIPLKVYTWQNVE------------------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYK 256 (339)
T ss_dssp ---SSCEEEEESCCCC------------------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHH
T ss_pred ---CCeEEEEeCCccc------------------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHH
Confidence 4999999999752 234 8999999999999999999898877511 1246899
Q ss_pred HHhhhhcCCCEEEecCCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHH
Q psy12587 300 PIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQL 377 (390)
Q Consensus 300 ~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (390)
++||||||+|||+++.++..+++.++.+|+.++ +.++++++|.++ +++ .+++|++++++.. +.++++.+.++.
T Consensus 257 l~eymA~G~PVI~~~~~~~~~~v~~~~~G~~~~-~~~e~~~~i~~l--~~~-~~~~m~~na~~~a-~~~~~~~f~k~~ 329 (339)
T 3rhz_A 257 LGSFLAAGIPVIVQEGIANQELIENNGLGWIVK-DVEEAIMKVKNV--NED-EYIELVKNVRSFN-PILRKGFFTRRL 329 (339)
T ss_dssp HHHHHHHTCCEEEETTCTTTHHHHHHTCEEEES-SHHHHHHHHHHC--CHH-HHHHHHHHHHHHT-HHHHTTHHHHHH
T ss_pred HHHHHHcCCCEEEccChhHHHHHHhCCeEEEeC-CHHHHHHHHHHh--CHH-HHHHHHHHHHHHH-HHhhccHHHHHH
Confidence 999999999999999999999999999999998 889999999986 345 7899999998886 556666655443
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-23 Score=187.58 Aligned_cols=272 Identities=14% Similarity=0.101 Sum_probs=179.1
Q ss_pred Hhh-cCCCEEEEcccccc-h---hHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHH-hcCcceEEEccHh
Q psy12587 72 WYS-EKPDLVFCDLVSIC-I---PILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWT-TCKADKIVVNSEF 145 (390)
Q Consensus 72 ~~~-~~~Dvi~~~~~~~~-~---~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ad~ii~~s~~ 145 (390)
+++ .+||+|++++.... + .+++..++|++...++...+.. +..+.....+.+ .+.+|.++++|+.
T Consensus 106 ~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~rs~~~---------~~~~~~~~~r~~~~~~a~~~~~~se~ 176 (396)
T 3dzc_A 106 VLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGLRTGNI---------YSPWPEEGNRKLTAALTQYHFAPTDT 176 (396)
T ss_dssp HHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCCCCSCT---------TSSTTHHHHHHHHHHTCSEEEESSHH
T ss_pred HHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCcccccc---------ccCCcHHHHHHHHHHhcCEEECCCHH
Confidence 344 99999999874332 2 2334445997643332211100 001111222333 5678999999999
Q ss_pred HHHHHHHHhccCCCCceeecCCCC-CCCCCCCCC-------ccchhhhcCCCCCCCCeEEEEeeccc-ccCCHHHHHHHH
Q psy12587 146 TKSVVQATFRSLDHKCLDILYPSV-YTEGLEKTT-------PEPIENVLNPLPGKEDIVFLSINRYE-RKKNLELAIYSL 216 (390)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~vi~~~~-~~~~~~~~~-------~~~~~~~~~~l~~~~~~~i~~~g~~~-~~K~~~~ll~a~ 216 (390)
.++.+.+. +.+++++.+++|++ |...+.... ...+++.++-++.++++++++.+|.. ..|+++.+++|+
T Consensus 177 ~~~~l~~~--G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~~~~ll~A~ 254 (396)
T 3dzc_A 177 SRANLLQE--NYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGGFERICQAL 254 (396)
T ss_dssp HHHHHHHT--TCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTHHHHHHHHH
T ss_pred HHHHHHHc--CCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchhHHHHHHHHH
Confidence 99998875 55567899999964 322221111 02334444311233455666666643 457899999999
Q ss_pred HHHHhhcccccccceEEEEE-cCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCC
Q psy12587 217 NSLRSRLSDEMKTHVKLVVA-GGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEH 295 (390)
Q Consensus 217 ~~l~~~~~~~~~~~~~l~i~-G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~ 295 (390)
..+.++.|+ +.+++. |.++ ...+.+++. .+..++|.+.+++...++..+|+.||+++.+|
T Consensus 255 ~~l~~~~~~-----~~~v~~~g~~~-------~~~~~l~~~---~~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~S---- 315 (396)
T 3dzc_A 255 ITTAEQHPE-----CQILYPVHLNP-------NVREPVNKL---LKGVSNIVLIEPQQYLPFVYLMDRAHIILTDS---- 315 (396)
T ss_dssp HHHHHHCTT-----EEEEEECCBCH-------HHHHHHHHH---TTTCTTEEEECCCCHHHHHHHHHHCSEEEESC----
T ss_pred HHHHHhCCC-----ceEEEEeCCCh-------HHHHHHHHH---HcCCCCEEEeCCCCHHHHHHHHHhcCEEEECC----
Confidence 999887775 888875 4331 112333332 24457899999999889999999999999988
Q ss_pred CCccHHhhhhcCCCEEEe-cCCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHH
Q psy12587 296 FGIVPIEAMFCKRPVIAV-NSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFS 374 (390)
Q Consensus 296 ~~~~~~Ea~a~G~pvi~~-~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (390)
|....|||++|+|+|++ +.++.+|.+++| .+++++.|++++++++.++++|++ .+++|++++. .|.....+
T Consensus 316 -Gg~~~EA~a~G~PvV~~~~~~~~~e~v~~G-~~~lv~~d~~~l~~ai~~ll~d~~-~~~~m~~~~~-----~~~~~~aa 387 (396)
T 3dzc_A 316 -GGIQEEAPSLGKPVLVMRETTERPEAVAAG-TVKLVGTNQQQICDALSLLLTDPQ-AYQAMSQAHN-----PYGDGKAC 387 (396)
T ss_dssp -SGGGTTGGGGTCCEEECCSSCSCHHHHHHT-SEEECTTCHHHHHHHHHHHHHCHH-HHHHHHTSCC-----TTCCSCHH
T ss_pred -ccHHHHHHHcCCCEEEccCCCcchHHHHcC-ceEEcCCCHHHHHHHHHHHHcCHH-HHHHHhhccC-----CCcCChHH
Confidence 34448999999999998 667778888776 567776589999999999999998 8888876543 34444445
Q ss_pred HHHHHHH
Q psy12587 375 IQLNTIV 381 (390)
Q Consensus 375 ~~~~~~~ 381 (390)
+++.+++
T Consensus 388 ~ri~~~l 394 (396)
T 3dzc_A 388 QRIADIL 394 (396)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555544
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.6e-22 Score=175.65 Aligned_cols=320 Identities=11% Similarity=0.012 Sum_probs=197.1
Q ss_pred cchhhhHhh-HhhhhcCCceeecCC--cc--ccccCCCcceEEeccc-cc-cccchhhHHHHHHHHHHHHHHHHHHhh-c
Q psy12587 4 ATARLTITA-TAWGATGPRTTAHDH--CF--KETKDGTLPVKVIGDW-LP-RNIFGKFYALCMYLRMIVIALYVAWYS-E 75 (390)
Q Consensus 4 G~~~~~~~l-~~L~~~G~~V~~~~~--~~--~~~~~~~~~i~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 75 (390)
|.-.-+..+ ++|.++||+|++++. .. ......++++..++.. .+ ......+......++.+... ..+++ .
T Consensus 14 GHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~ 91 (365)
T 3s2u_A 14 GHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKSLFQA--LRVIRQL 91 (365)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHHHHHHHHHH--HHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHHHHHH--HHHHHhc
Confidence 333446788 999999999988721 11 1223445666665321 11 11111222222222222211 13456 9
Q ss_pred CCCEEEEcccccchh---HHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHHH
Q psy12587 76 KPDLVFCDLVSICIP---ILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQA 152 (390)
Q Consensus 76 ~~Dvi~~~~~~~~~~---~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~ 152 (390)
+||+|+++......+ ++++.++|++++-.+... ....+++.+.++.++...+..
T Consensus 92 ~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~~~-----------------G~~nr~l~~~a~~v~~~~~~~------ 148 (365)
T 3s2u_A 92 RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAVA-----------------GTANRSLAPIARRVCEAFPDT------ 148 (365)
T ss_dssp CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSSSC-----------------CHHHHHHGGGCSEEEESSTTS------
T ss_pred CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecchhh-----------------hhHHHhhccccceeeeccccc------
Confidence 999999988655443 345666998864433211 122345566788887765432
Q ss_pred HhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceE
Q psy12587 153 TFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVK 232 (390)
Q Consensus 153 ~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~ 232 (390)
++ ...+..++.|++..+.+...... .. ++.+...++++.|+....+..+.+.+++..+..... +.
T Consensus 149 -~~--~~~k~~~~g~pvr~~~~~~~~~~---~~---~~~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~~~------~~ 213 (365)
T 3s2u_A 149 -FP--ASDKRLTTGNPVRGELFLDAHAR---AP---LTGRRVNLLVLGGSLGAEPLNKLLPEALAQVPLEIR------PA 213 (365)
T ss_dssp -SC--C---CEECCCCCCGGGCCCTTSS---CC---CTTSCCEEEECCTTTTCSHHHHHHHHHHHTSCTTTC------CE
T ss_pred -cc--CcCcEEEECCCCchhhccchhhh---cc---cCCCCcEEEEECCcCCccccchhhHHHHHhcccccc------eE
Confidence 11 14677888888877655432211 11 233455667777888777777888888888765433 44
Q ss_pred E-EEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEE
Q psy12587 233 L-VVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVI 311 (390)
Q Consensus 233 l-~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi 311 (390)
+ +++|.+.. +.+.+..++.+ .++.+.+++++. .++|+.||++|.-+ .++++.|+|++|+|+|
T Consensus 214 vi~~~G~~~~---------~~~~~~~~~~~--~~~~v~~f~~dm--~~~l~~aDlvI~ra----G~~Tv~E~~a~G~P~I 276 (365)
T 3s2u_A 214 IRHQAGRQHA---------EITAERYRTVA--VEADVAPFISDM--AAAYAWADLVICRA----GALTVSELTAAGLPAF 276 (365)
T ss_dssp EEEECCTTTH---------HHHHHHHHHTT--CCCEEESCCSCH--HHHHHHCSEEEECC----CHHHHHHHHHHTCCEE
T ss_pred EEEecCcccc---------ccccceecccc--cccccccchhhh--hhhhccceEEEecC----CcchHHHHHHhCCCeE
Confidence 4 44554432 66666667765 467888998764 78999999999644 3678999999999999
Q ss_pred EecCCCc--------ccceecCcceeeecC---CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHH
Q psy12587 312 AVNSGGP--------KESVVDGRTGFLCES---NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTI 380 (390)
Q Consensus 312 ~~~~~~~--------~e~i~~~~~g~~~~~---~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
..+.+.. .+.+.+...|.+++. ++++++++|.++++|++ .+++|++++++.. .....+.+++.++++
T Consensus 277 lip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~-~~~~m~~~a~~~~-~~~aa~~ia~~i~~l 354 (365)
T 3s2u_A 277 LVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPE-TLRSMADQARSLA-KPEATRTVVDACLEV 354 (365)
T ss_dssp ECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTH-HHHHHHHHHHHTC-CTTHHHHHHHHHHHH
T ss_pred EeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHH-HHHHHHHHHHhcC-CccHHHHHHHHHHHH
Confidence 8775432 234555567888764 68999999999999999 9999999998876 455566666666655
Q ss_pred HH
Q psy12587 381 VN 382 (390)
Q Consensus 381 ~~ 382 (390)
.+
T Consensus 355 ar 356 (365)
T 3s2u_A 355 AR 356 (365)
T ss_dssp C-
T ss_pred Hc
Confidence 44
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-22 Score=184.74 Aligned_cols=334 Identities=11% Similarity=0.015 Sum_probs=204.2
Q ss_pred CcchhhhHhh-HhhhhcCCceeec-CCcc-ccccCCCcceEEeccc------------ccc------ccchhhHHHHHHH
Q psy12587 3 GATARLTITA-TAWGATGPRTTAH-DHCF-KETKDGTLPVKVIGDW------------LPR------NIFGKFYALCMYL 61 (390)
Q Consensus 3 GG~~~~~~~l-~~L~~~G~~V~~~-~~~~-~~~~~~~~~i~~~~~~------------~~~------~~~~~~~~~~~~~ 61 (390)
+|....+..| ++|.++||+|+++ .... ......++.+..++.. ... .....+......+
T Consensus 31 ~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (412)
T 3otg_A 31 HGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKLGFEPVATGMPVFDGFLAALRIRFDTDSPEGLTPEQLSELPQIVF 110 (412)
T ss_dssp HHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCEEEECCCCHHHHHHHHHHHHHSCSCCTTCCHHHHTTSHHHHH
T ss_pred cccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhcCCceeecCcccccchhhhhhhhhcccCCccCChhHhhHHHHHHH
Confidence 5666677889 9999999999998 2222 1223345555555320 000 0000011111111
Q ss_pred HHH----HHHHHHHHhh-cCCCEEEEccccc-chhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHH----
Q psy12587 62 RMI----VIALYVAWYS-EKPDLVFCDLVSI-CIPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEW---- 131 (390)
Q Consensus 62 ~~~----~~~~~~~~~~-~~~Dvi~~~~~~~-~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 131 (390)
... .......+++ .+||+|+++.... +..+++..++|+|++.|+...+... ...+...+..+..+.
T Consensus 111 ~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~ 186 (412)
T 3otg_A 111 GRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPDDL----TRSIEEEVRGLAQRLGLDL 186 (412)
T ss_dssp HTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCSHH----HHHHHHHHHHHHHHTTCCC
T ss_pred hccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEecccccCchhh----hHHHHHHHHHHHHHcCCCC
Confidence 111 0111223455 8999999986432 3334455669999988875432211 111111111111111
Q ss_pred ----HhcCcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhh--cCCCCCCCCeEEEEeecccc
Q psy12587 132 ----TTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENV--LNPLPGKEDIVFLSINRYER 205 (390)
Q Consensus 132 ----~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~i~~~g~~~~ 205 (390)
....+|.+++.++...+...+.+. .....+.+.+.+.. ...... . .+.+.+.++++.|++.
T Consensus 187 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-------~~~~~~~~~--~~~~~~~vlv~~G~~~- 253 (412)
T 3otg_A 187 PPGRIDGFGNPFIDIFPPSLQEPEFRAR---PRRHELRPVPFAEQ-------GDLPAWLSS--RDTARPLVYLTLGTSS- 253 (412)
T ss_dssp CSSCCGGGGCCEEECSCGGGSCHHHHTC---TTEEECCCCCCCCC-------CCCCGGGGG--SCTTSCEEEEECTTTT-
T ss_pred CcccccCCCCeEEeeCCHHhcCCcccCC---CCcceeeccCCCCC-------CCCCCcccc--ccCCCCEEEEEcCCCC-
Confidence 124678889888776665544322 11111112111110 001111 1 1334677888999986
Q ss_pred cCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCC-CCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhc
Q psy12587 206 KKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDP-HNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFC 284 (390)
Q Consensus 206 ~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~-~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~a 284 (390)
.++.+.+.+++..+.+. +.++++++++.. . +.++ .++++|.+.|+++ +.++|+.|
T Consensus 254 ~~~~~~~~~~~~~l~~~-------~~~~~~~~g~~~~~--------~~l~------~~~~~v~~~~~~~---~~~~l~~a 309 (412)
T 3otg_A 254 GGTVEVLRAAIDGLAGL-------DADVLVASGPSLDV--------SGLG------EVPANVRLESWVP---QAALLPHV 309 (412)
T ss_dssp CSCHHHHHHHHHHHHTS-------SSEEEEECCSSCCC--------TTCC------CCCTTEEEESCCC---HHHHGGGC
T ss_pred cCcHHHHHHHHHHHHcC-------CCEEEEEECCCCCh--------hhhc------cCCCcEEEeCCCC---HHHHHhcC
Confidence 67778888887777654 256666555433 2 2221 2468999999994 46899999
Q ss_pred ceEEeCCCCCCCCccHHhhhhcCCCEEEecCCC----cccceecCcceeeecC---CHHHHHHHHHHHhcCChhHHHHHH
Q psy12587 285 HCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGG----PKESVVDGRTGFLCES---NEEAFAKAMKKIVDNDGNIIQQFS 357 (390)
Q Consensus 285 dv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~----~~e~i~~~~~g~~~~~---~~~~l~~~i~~l~~~~~~~~~~~~ 357 (390)
|++|.++ .+.+++|||++|+|+|+.+.++ ..+.+.+..+|++++. |+++++++|.++++|++ .+++++
T Consensus 310 d~~v~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~-~~~~~~ 384 (412)
T 3otg_A 310 DLVVHHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEES-YRAGAR 384 (412)
T ss_dssp SEEEESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHHCHH-HHHHHH
T ss_pred cEEEECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHH-HHHHHH
Confidence 9999765 3478999999999999976643 5677777778999875 78999999999999998 999999
Q ss_pred HHHHHHHhhhcCHHHHHHHHHHHHHh
Q psy12587 358 QFGFNRFNEKFSFQAFSIQLNTIVNN 383 (390)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
+.+++.. +.++++.+++.+.+++.+
T Consensus 385 ~~~~~~~-~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 385 AVAAEIA-AMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp HHHHHHH-HSCCHHHHHTTHHHHHC-
T ss_pred HHHHHHh-cCCCHHHHHHHHHHHhcc
Confidence 9888876 678999999999888754
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.89 E-value=9.7e-23 Score=183.72 Aligned_cols=271 Identities=15% Similarity=0.105 Sum_probs=178.9
Q ss_pred Hhh-cCCCEEEEcccc-cch---hHHHhhcccEEEEeecCCccccchhhhhhhhcccchhh-HHHHHhcCcceEEEccHh
Q psy12587 72 WYS-EKPDLVFCDLVS-ICI---PILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNK-LEEWTTCKADKIVVNSEF 145 (390)
Q Consensus 72 ~~~-~~~Dvi~~~~~~-~~~---~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ad~ii~~s~~ 145 (390)
+++ .+||+|++++.. ..+ .+++..++|++ +++........ +..+-.. ....+-+.+|.++++|+.
T Consensus 109 ~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~-h~~aglrs~~~--------~~~~p~~~~r~~~~~~a~~~~~~se~ 179 (403)
T 3ot5_A 109 VIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLG-HVEAGLRTWNK--------YSPFPEEMNRQLTGVMADIHFSPTKQ 179 (403)
T ss_dssp HHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEE-EESCCCCCSCT--------TSSTTHHHHHHHHHHHCSEEEESSHH
T ss_pred HHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEE-EEECCcccccc--------ccCCcHHHHHHHHHHhcCEEECCCHH
Confidence 344 999999998743 222 23344558975 44432110000 0000011 122334458999999999
Q ss_pred HHHHHHHHhccCCCCceeecCCC-CCCCCCCCCC--ccchhhhcCCCCCCCCeEEEEeecccc-cCCHHHHHHHHHHHHh
Q psy12587 146 TKSVVQATFRSLDHKCLDILYPS-VYTEGLEKTT--PEPIENVLNPLPGKEDIVFLSINRYER-KKNLELAIYSLNSLRS 221 (390)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~vi~~~-~~~~~~~~~~--~~~~~~~~~~l~~~~~~~i~~~g~~~~-~K~~~~ll~a~~~l~~ 221 (390)
.++.+.+. +.+++++.+++|+ +|...+.... ....++. + .++++++++.||... .|+++.+++++..+.+
T Consensus 180 ~~~~l~~~--Gi~~~~i~vvGn~~~D~~~~~~~~~~~~~~~~~---l-~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~ 253 (403)
T 3ot5_A 180 AKENLLAE--GKDPATIFVTGNTAIDALKTTVQKDYHHPILEN---L-GDNRLILMTAHRRENLGEPMQGMFEAVREIVE 253 (403)
T ss_dssp HHHHHHHT--TCCGGGEEECCCHHHHHHHHHSCTTCCCHHHHS---C-TTCEEEEECCCCHHHHTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHc--CCCcccEEEeCCchHHHHHhhhhhhcchHHHHh---c-cCCCEEEEEeCcccccCcHHHHHHHHHHHHHH
Confidence 99999885 5657889999996 4433222111 1122222 2 235566777777643 4678999999999988
Q ss_pred hcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHH-cCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccH
Q psy12587 222 RLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKK-LKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVP 300 (390)
Q Consensus 222 ~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~-~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~ 300 (390)
+.|+ +.+++.+... ..+++.+++ ++..++|.+.++++..++..+|+.||+++.+| |...
T Consensus 254 ~~~~-----~~~v~~~~~~----------~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~S-----Gg~~ 313 (403)
T 3ot5_A 254 SRED-----TELVYPMHLN----------PAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTDS-----GGVQ 313 (403)
T ss_dssp HCTT-----EEEEEECCSC----------HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEEEEECC-----HHHH
T ss_pred hCCC-----ceEEEecCCC----------HHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCEEEECC-----ccHH
Confidence 8775 8888874321 223333333 34447899999999999999999999999887 3444
Q ss_pred HhhhhcCCCEEEe-cCCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHH
Q psy12587 301 IEAMFCKRPVIAV-NSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNT 379 (390)
Q Consensus 301 ~Ea~a~G~pvi~~-~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
+||+++|+|+|++ +.++..|.++.| +|+++..|++++++++.+++++++ .+++|++++..+. +..+.+++++.+.+
T Consensus 314 ~EA~a~g~PvV~~~~~~~~~e~v~~g-~~~lv~~d~~~l~~ai~~ll~~~~-~~~~m~~~~~~~g-~~~aa~rI~~~l~~ 390 (403)
T 3ot5_A 314 EEAPGMGVPVLVLRDTTERPEGIEAG-TLKLIGTNKENLIKEALDLLDNKE-SHDKMAQAANPYG-DGFAANRILAAIKS 390 (403)
T ss_dssp HHGGGTTCCEEECCSSCSCHHHHHHT-SEEECCSCHHHHHHHHHHHHHCHH-HHHHHHHSCCTTC-CSCHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEecCCCcchhheeCC-cEEEcCCCHHHHHHHHHHHHcCHH-HHHHHHhhcCccc-CCcHHHHHHHHHHH
Confidence 8999999999998 667777887665 788876699999999999999998 8888876554432 34444544444444
Q ss_pred H
Q psy12587 380 I 380 (390)
Q Consensus 380 ~ 380 (390)
.
T Consensus 391 ~ 391 (403)
T 3ot5_A 391 H 391 (403)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.7e-21 Score=175.60 Aligned_cols=340 Identities=12% Similarity=0.049 Sum_probs=195.1
Q ss_pred CcchhhhHhh-HhhhhcCCceeec-CCccc-cccCCCcceEEecccccccc------chhhHH-HHHHHH---HHHHHHH
Q psy12587 3 GATARLTITA-TAWGATGPRTTAH-DHCFK-ETKDGTLPVKVIGDWLPRNI------FGKFYA-LCMYLR---MIVIALY 69 (390)
Q Consensus 3 GG~~~~~~~l-~~L~~~G~~V~~~-~~~~~-~~~~~~~~i~~~~~~~~~~~------~~~~~~-~~~~~~---~~~~~~~ 69 (390)
+|.......+ ++|.++||+|+++ ..... .....++.+..++...+... ...+.. +..+.. ..... .
T Consensus 18 ~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l 96 (430)
T 2iyf_A 18 HGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAATGPRPVLYHSTLPGPDADPEAWGSTLLDNVEPFLNDAIQALPQ-L 96 (430)
T ss_dssp HHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTTSCEEEECCCCSCCTTSCGGGGCSSHHHHHHHHHHHHHHHHHH-H
T ss_pred CccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhCCCEEEEcCCcCccccccccccchhhHHHHHHHHHHHHHHHHH-H
Confidence 4666778899 9999999999998 22221 22334455554433211110 001111 111111 11111 2
Q ss_pred HHHhh-cCCCEEEEcccc-cchhHHHhhcccEEEEeecCCccccchh-------------hhhhhhcccchhhHHHH---
Q psy12587 70 VAWYS-EKPDLVFCDLVS-ICIPILQAKQFKVLFYCHYPDQLLSKQG-------------SFLKSIYRFPLNKLEEW--- 131 (390)
Q Consensus 70 ~~~~~-~~~Dvi~~~~~~-~~~~~~~~~~~~~v~~~h~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~--- 131 (390)
..+++ .+||+|+++... .+..+++..++|+|.+.++......... .....+...+...+.+.
T Consensus 97 ~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 176 (430)
T 2iyf_A 97 ADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWREPRQTERGRAYYARFEAWLKENGIT 176 (430)
T ss_dssp HHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHHHHHHSHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchhhhhccchHHHHHHHHHHHHHHHhCCC
Confidence 23555 899999987642 2334455566999988865431110000 00000000011111111
Q ss_pred -----HhcCcceEEEccHhHHHHHHHHhccCCCCc-eeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccc
Q psy12587 132 -----TTCKADKIVVNSEFTKSVVQATFRSLDHKC-LDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYER 205 (390)
Q Consensus 132 -----~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~-~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~ 205 (390)
.+..+|.+++.+....+.... .. ..+ +..++++++...... .... -..+++++++++|++.
T Consensus 177 ~~~~~~~~~~~~~l~~~~~~~~~~~~---~~-~~~~v~~vG~~~~~~~~~~----~~~~----~~~~~~~v~v~~Gs~~- 243 (430)
T 2iyf_A 177 EHPDTFASHPPRSLVLIPKALQPHAD---RV-DEDVYTFVGACQGDRAEEG----GWQR----PAGAEKVVLVSLGSAF- 243 (430)
T ss_dssp SCHHHHHHCCSSEEECSCGGGSTTGG---GS-CTTTEEECCCCC-----CC----CCCC----CTTCSEEEEEECTTTC-
T ss_pred CCHHHHhcCCCcEEEeCcHHhCCCcc---cC-CCccEEEeCCcCCCCCCCC----CCcc----ccCCCCeEEEEcCCCC-
Confidence 222578888887655432211 12 234 667776554211000 0000 0123567888999988
Q ss_pred cCCHHHHHHHHHHHHhhcccccccceEE-EEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhc
Q psy12587 206 KKNLELAIYSLNSLRSRLSDEMKTHVKL-VVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFC 284 (390)
Q Consensus 206 ~K~~~~ll~a~~~l~~~~~~~~~~~~~l-~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~a 284 (390)
.++.+.+.+++..+.+. + ++++ +++|.+... +.++ .++++|.+.|++++. ++|+.|
T Consensus 244 ~~~~~~~~~~~~~l~~~-~-----~~~~~~~~G~~~~~--------~~l~------~~~~~v~~~~~~~~~---~~l~~a 300 (430)
T 2iyf_A 244 TKQPAFYRECVRAFGNL-P-----GWHLVLQIGRKVTP--------AELG------ELPDNVEVHDWVPQL---AILRQA 300 (430)
T ss_dssp C-CHHHHHHHHHHHTTC-T-----TEEEEEECC---CG--------GGGC------SCCTTEEEESSCCHH---HHHTTC
T ss_pred CCcHHHHHHHHHHHhcC-C-----CeEEEEEeCCCCCh--------HHhc------cCCCCeEEEecCCHH---HHhhcc
Confidence 55555555555555332 2 2666 577876542 2221 246789999999876 689999
Q ss_pred ceEEeCCCCCCCCccHHhhhhcCCCEEEecCCC----cccceecCcceeeecC---CHHHHHHHHHHHhcCChhHHHHHH
Q psy12587 285 HCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGG----PKESVVDGRTGFLCES---NEEAFAKAMKKIVDNDGNIIQQFS 357 (390)
Q Consensus 285 dv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~----~~e~i~~~~~g~~~~~---~~~~l~~~i~~l~~~~~~~~~~~~ 357 (390)
|++|..+ .+++++|||++|+|+|+++..+ ..+.+.+.+.|+.++. ++++++++|.++++|++ .+++++
T Consensus 301 d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~ 375 (430)
T 2iyf_A 301 DLFVTHA----GAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDPE-VARRLR 375 (430)
T ss_dssp SEEEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCHH-HHHHHH
T ss_pred CEEEECC----CccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCHH-HHHHHH
Confidence 9999754 2368999999999999998654 3555666678888864 78999999999999988 888998
Q ss_pred HHHHHHHhhhcCHHHHHHHHHHHHHhhh
Q psy12587 358 QFGFNRFNEKFSFQAFSIQLNTIVNNML 385 (390)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
+.+++.. +.++++..++.+.+++++..
T Consensus 376 ~~~~~~~-~~~~~~~~~~~i~~~~~~~~ 402 (430)
T 2iyf_A 376 RIQAEMA-QEGGTRRAADLIEAELPARH 402 (430)
T ss_dssp HHHHHHH-HHCHHHHHHHHHHTTSCC--
T ss_pred HHHHHHH-hcCcHHHHHHHHHHHhhccc
Confidence 8888776 56788888888887766543
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-20 Score=169.61 Aligned_cols=162 Identities=13% Similarity=0.114 Sum_probs=123.1
Q ss_pred CCCeEEEEeecccccCCH-HHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEec
Q psy12587 192 KEDIVFLSINRYERKKNL-ELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLT 270 (390)
Q Consensus 192 ~~~~~i~~~g~~~~~K~~-~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g 270 (390)
+++.++++.|+....++. ..+++++.+. .+.|+ ++++++|++... +.+. +++++|.+.|
T Consensus 217 ~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~-----~~~v~~~~~~~~--------~~l~------~~~~~v~~~~ 276 (391)
T 3tsa_A 217 SARRVCICMGRMVLNATGPAPLLRAVAAA-TELPG-----VEAVIAVPPEHR--------ALLT------DLPDNARIAE 276 (391)
T ss_dssp SSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTT-----EEEEEECCGGGG--------GGCT------TCCTTEEECC
T ss_pred CCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCC-----eEEEEEECCcch--------hhcc------cCCCCEEEec
Confidence 356777888998665444 7777777777 66654 899999876432 2221 3468999999
Q ss_pred CCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecC----CCcccceecCcceeeecC-----CHHHHHHH
Q psy12587 271 SPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS----GGPKESVVDGRTGFLCES-----NEEAFAKA 341 (390)
Q Consensus 271 ~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~----~~~~e~i~~~~~g~~~~~-----~~~~l~~~ 341 (390)
+++.. +++..||++|..+ .+.+++|||++|+|+|+.+. .+..+.+.+...|..++. ++++++++
T Consensus 277 ~~~~~---~ll~~ad~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~a 349 (391)
T 3tsa_A 277 SVPLN---LFLRTCELVICAG----GSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDS 349 (391)
T ss_dssp SCCGG---GTGGGCSEEEECC----CHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHH
T ss_pred cCCHH---HHHhhCCEEEeCC----CHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHHHHHH
Confidence 99876 4679999999643 45689999999999999654 344566777778988863 79999999
Q ss_pred HHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q psy12587 342 MKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVN 382 (390)
Q Consensus 342 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
+.++++|+. .++++++.+++.. +..+++..++.+.+++.
T Consensus 350 i~~ll~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 350 IATVLGDTG-FAAAAIKLSDEIT-AMPHPAALVRTLENTAA 388 (391)
T ss_dssp HHHHHTCTH-HHHHHHHHHHHHH-TSCCHHHHHHHHHHC--
T ss_pred HHHHHcCHH-HHHHHHHHHHHHH-cCCCHHHHHHHHHHHHh
Confidence 999999999 9999988887775 78899888887766543
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.9e-20 Score=167.71 Aligned_cols=154 Identities=13% Similarity=0.061 Sum_probs=106.1
Q ss_pred CCCeEEEEeecccccC----------CHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcC
Q psy12587 192 KEDIVFLSINRYERKK----------NLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLK 261 (390)
Q Consensus 192 ~~~~~i~~~g~~~~~K----------~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~ 261 (390)
+.+.+++++|++...+ .+..+++++..+ ++++++++++... +.+. .
T Consensus 226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~----------~~~~v~~~~~~~~--------~~l~------~ 281 (398)
T 4fzr_A 226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL----------GFEVVVAVSDKLA--------QTLQ------P 281 (398)
T ss_dssp SSCEEECC----------------CCSHHHHHHHGGGG----------TCEEEECCCC----------------------
T ss_pred CCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC----------CCEEEEEeCCcch--------hhhc------c
Confidence 4677888899996544 345555555433 2778888876532 3332 2
Q ss_pred CCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecC----CCcccceecCcceeeecC---C
Q psy12587 262 LSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS----GGPKESVVDGRTGFLCES---N 334 (390)
Q Consensus 262 l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~----~~~~e~i~~~~~g~~~~~---~ 334 (390)
++++|.+.|+++. .++|..||++|..+ .+.+++|||++|+|+|+.+. .+..+.+.+.+.|+.++. +
T Consensus 282 ~~~~v~~~~~~~~---~~ll~~ad~~v~~g----G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~ 354 (398)
T 4fzr_A 282 LPEGVLAAGQFPL---SAIMPACDVVVHHG----GHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAG 354 (398)
T ss_dssp CCTTEEEESCCCH---HHHGGGCSEEEECC----CHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC-----
T ss_pred CCCcEEEeCcCCH---HHHHhhCCEEEecC----CHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCC
Confidence 3689999999964 47899999999643 46789999999999999544 456677778889999864 6
Q ss_pred HHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHH
Q psy12587 335 EEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLN 378 (390)
Q Consensus 335 ~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (390)
+++++++|.++++|+. .++++++.+++.. +..+++.+++.+.
T Consensus 355 ~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~l~ 396 (398)
T 4fzr_A 355 VESVLAACARIRDDSS-YVGNARRLAAEMA-TLPTPADIVRLIE 396 (398)
T ss_dssp --CHHHHHHHHHHCTH-HHHHHHHHHHHHT-TSCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCHH-HHHHHHHHHHHHH-cCCCHHHHHHHHh
Confidence 8899999999999999 9999998888876 7889998887664
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.81 E-value=9.7e-19 Score=158.79 Aligned_cols=336 Identities=13% Similarity=0.053 Sum_probs=187.3
Q ss_pred cchhhhHhh-HhhhhcCCceeec-CCcc-ccccCCCcceEEeccccccc-------cchhhHHHHH-HHHH---HHHHHH
Q psy12587 4 ATARLTITA-TAWGATGPRTTAH-DHCF-KETKDGTLPVKVIGDWLPRN-------IFGKFYALCM-YLRM---IVIALY 69 (390)
Q Consensus 4 G~~~~~~~l-~~L~~~G~~V~~~-~~~~-~~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~~-~~~~---~~~~~~ 69 (390)
|.-..+..| ++|.++||+|+++ +... ......++.+..+....+.. .......+.. +... .....
T Consensus 16 Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l- 94 (402)
T 3ia7_A 16 GHVYPSLGLVSELARRGHRITYVTTPLFADEVKAAGAEVVLYKSEFDTFHVPEVVKQEDAETQLHLVYVRENVAILRAA- 94 (402)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHTTCEEEECCCGGGTSSSSSSSCCTTHHHHHHHHHHHHHHHHHHHH-
T ss_pred cccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHcCCEEEecccccccccccccccccchHHHHHHHHHHHHHHHHHHH-
Confidence 555667788 9999999999998 2221 22233445555554221110 0011111111 1111 11112
Q ss_pred HHHhh-cCCCEEEEcc-cc-cchhHHHhhcccEEEEeecCCccccchh--hhhhh-------hcccchhhHHH-------
Q psy12587 70 VAWYS-EKPDLVFCDL-VS-ICIPILQAKQFKVLFYCHYPDQLLSKQG--SFLKS-------IYRFPLNKLEE------- 130 (390)
Q Consensus 70 ~~~~~-~~~Dvi~~~~-~~-~~~~~~~~~~~~~v~~~h~~~~~~~~~~--~~~~~-------~~~~~~~~~~~------- 130 (390)
..+++ .+||+|++++ .. .+..+++..++|++.+.|+...+..... ..... ........+..
T Consensus 95 ~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 174 (402)
T 3ia7_A 95 EEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKSNGQRHPADVEAVHSVLVDLLGKYGV 174 (402)
T ss_dssp HHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCHHHHHHHHHTCCCGGGSHHHHHHHHHHHHTTTC
T ss_pred HHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccccccccccccccChhhHHHHHHHHHHHHHHcCC
Confidence 23455 8999999983 22 2333445556999988875443211111 00000 00000011111
Q ss_pred -----HHhcCc-ceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeeccc
Q psy12587 131 -----WTTCKA-DKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYE 204 (390)
Q Consensus 131 -----~~~~~a-d~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~ 204 (390)
.+.... |..++..+...+.....+ ..++.++.+.+....... .... ...+.+.++++.|+..
T Consensus 175 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~vGp~~~~~~~~~-------~~~~-~~~~~~~v~v~~G~~~ 242 (402)
T 3ia7_A 175 DTPVKEYWDEIEGLTIVFLPKSFQPFAETF----DERFAFVGPTLTGRDGQP-------GWQP-PRPDAPVLLVSLGNQF 242 (402)
T ss_dssp CSCHHHHHTCCCSCEEESSCGGGSTTGGGC----CTTEEECCCCCCC----C-------CCCC-SSTTCCEEEEECCSCS
T ss_pred CCChhhhhcCCCCeEEEEcChHhCCccccC----CCCeEEeCCCCCCcccCC-------CCcc-cCCCCCEEEEECCCCC
Confidence 111112 555555544333222211 234555544332111000 0000 0223667888999987
Q ss_pred ccCCHHHHHHHHHHHHhhcccccccceEEEE-EcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHh
Q psy12587 205 RKKNLELAIYSLNSLRSRLSDEMKTHVKLVV-AGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKF 283 (390)
Q Consensus 205 ~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i-~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ 283 (390)
..+ .+.+..++..+.+. + +++++ +|.+... +.++ .++++|.+.|++++. ++|+.
T Consensus 243 ~~~-~~~~~~~~~~~~~~-~------~~~~~~~g~~~~~--------~~~~------~~~~~v~~~~~~~~~---~ll~~ 297 (402)
T 3ia7_A 243 NEH-PEFFRACAQAFADT-P------WHVVMAIGGFLDP--------AVLG------PLPPNVEAHQWIPFH---SVLAH 297 (402)
T ss_dssp SCC-HHHHHHHHHHHTTS-S------CEEEEECCTTSCG--------GGGC------SCCTTEEEESCCCHH---HHHTT
T ss_pred cch-HHHHHHHHHHHhcC-C------cEEEEEeCCcCCh--------hhhC------CCCCcEEEecCCCHH---HHHhh
Confidence 554 23333333333322 2 44444 5654332 2221 146899999999887 79999
Q ss_pred cceEEeCCCCCCCCccHHhhhhcCCCEEEecC-----CCcccceecCcceeeecC---CHHHHHHHHHHHhcCChhHHHH
Q psy12587 284 CHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS-----GGPKESVVDGRTGFLCES---NEEAFAKAMKKIVDNDGNIIQQ 355 (390)
Q Consensus 284 adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~-----~~~~e~i~~~~~g~~~~~---~~~~l~~~i~~l~~~~~~~~~~ 355 (390)
||++|..+ ...+++|||++|+|+|+.+. ....+.+.+.+.|..++. +++++++++.++++|++ .+++
T Consensus 298 ad~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~~-~~~~ 372 (402)
T 3ia7_A 298 ARACLTHG----TTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAADSA-VRER 372 (402)
T ss_dssp EEEEEECC----CHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHHHHHHHHHHHCHH-HHHH
T ss_pred CCEEEECC----CHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHHHHHHHHHHcCHH-HHHH
Confidence 99999755 23688999999999996554 345566677778888864 78999999999999998 8888
Q ss_pred HHHHHHHHHhhhcCHHHHHHHHHHHHHh
Q psy12587 356 FSQFGFNRFNEKFSFQAFSIQLNTIVNN 383 (390)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
+++.+.+.. +..+++..++.+.+++.+
T Consensus 373 ~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 373 VRRMQRDIL-SSGGPARAADEVEAYLGR 399 (402)
T ss_dssp HHHHHHHHH-TSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-hCChHHHHHHHHHHHHhh
Confidence 888777765 678888888888887764
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.4e-18 Score=155.91 Aligned_cols=325 Identities=11% Similarity=0.032 Sum_probs=185.1
Q ss_pred CcchhhhHhh-HhhhhcCCceeecCCccc-cccCCCcceEEecccc-----------------------ccccchhhHHH
Q psy12587 3 GATARLTITA-TAWGATGPRTTAHDHCFK-ETKDGTLPVKVIGDWL-----------------------PRNIFGKFYAL 57 (390)
Q Consensus 3 GG~~~~~~~l-~~L~~~G~~V~~~~~~~~-~~~~~~~~i~~~~~~~-----------------------~~~~~~~~~~~ 57 (390)
+|....+..| ++|.++||+|+++..... .....++.+..++... +......+...
T Consensus 31 ~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (398)
T 3oti_A 31 IGHLFPLIQLAWGFRTAGHDVLIAVAEHADRAAAAGLEVVDVAPDYSAVKVFEQVAKDNPRFAETVATRPAIDLEEWGVQ 110 (398)
T ss_dssp HHHHGGGHHHHHHHHHTTCEEEEEESSCHHHHHTTTCEEEESSTTCCHHHHHHHHHHHCHHHHHTGGGSCCCSGGGGHHH
T ss_pred cchHhHHHHHHHHHHHCCCEEEEeccchHHHHHhCCCeeEecCCccCHHHHhhhcccCCccccccccCChhhhHHHHHHH
Confidence 3555667889 999999999999833221 1233455555543210 00001111111
Q ss_pred -HHHHHHHHHHHHHHHhh-cCCCEEEEcccc-cchhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHh-
Q psy12587 58 -CMYLRMIVIALYVAWYS-EKPDLVFCDLVS-ICIPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTT- 133 (390)
Q Consensus 58 -~~~~~~~~~~~~~~~~~-~~~Dvi~~~~~~-~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 133 (390)
..........+ ..+++ .+||+|+++... .+..+++..++|++.+.+++...... .......+...+.+..+
T Consensus 111 ~~~~~~~~~~~l-~~~l~~~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~~ 185 (398)
T 3oti_A 111 IAAVNRPLVDGT-MALVDDYRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRTRGM----HRSIASFLTDLMDKHQVS 185 (398)
T ss_dssp HHHHHGGGHHHH-HHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCCTTH----HHHHHTTCHHHHHHTTCC
T ss_pred HHHHHHHHHHHH-HHHHHHcCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCccch----hhHHHHHHHHHHHHcCCC
Confidence 11111111111 23455 899999986432 23445566679999888765332111 11111111122222211
Q ss_pred -cCcceEEEccHhHHHHHHHHhccCCCCceeecC-CCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeeccccc-CCHH
Q psy12587 134 -CKADKIVVNSEFTKSVVQATFRSLDHKCLDILY-PSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERK-KNLE 210 (390)
Q Consensus 134 -~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~-K~~~ 210 (390)
...+..+..++....... .....++..+| ++ .......+. ...+.+.++++.|++... ++.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~----------~~~~~~~~~-~~~~~~~v~v~~G~~~~~~~~~~ 250 (398)
T 3oti_A 186 LPEPVATIESFPPSLLLEA----EPEGWFMRWVPYGG----------GAVLGDRLP-PVPARPEVAITMGTIELQAFGIG 250 (398)
T ss_dssp CCCCSEEECSSCGGGGTTS----CCCSBCCCCCCCCC----------CEECCSSCC-CCCSSCEEEECCTTTHHHHHCGG
T ss_pred CCCCCeEEEeCCHHHCCCC----CCCCCCccccCCCC----------CcCCchhhh-cCCCCCEEEEEcCCCccccCcHH
Confidence 123444444432211000 00011222222 11 011111111 023467888899998654 3555
Q ss_pred HHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeC
Q psy12587 211 LAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYT 290 (390)
Q Consensus 211 ~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~p 290 (390)
.+.+++..+.+. ++++++++++... +.+. +++++|.+.|+++.. ++|..||++|..
T Consensus 251 ~~~~~~~~l~~~-------~~~~v~~~g~~~~--------~~l~------~~~~~v~~~~~~~~~---~ll~~ad~~v~~ 306 (398)
T 3oti_A 251 AVEPIIAAAGEV-------DADFVLALGDLDI--------SPLG------TLPRNVRAVGWTPLH---TLLRTCTAVVHH 306 (398)
T ss_dssp GHHHHHHHHHTS-------SSEEEEECTTSCC--------GGGC------SCCTTEEEESSCCHH---HHHTTCSEEEEC
T ss_pred HHHHHHHHHHcC-------CCEEEEEECCcCh--------hhhc------cCCCcEEEEccCCHH---HHHhhCCEEEEC
Confidence 566666655543 2788888877543 2222 346899999999644 689999999964
Q ss_pred CCCCCCCccHHhhhhcCCCEEE----ecCCCcc--cceecCcceeeecC---CHHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy12587 291 PSNEHFGIVPIEAMFCKRPVIA----VNSGGPK--ESVVDGRTGFLCES---NEEAFAKAMKKIVDNDGNIIQQFSQFGF 361 (390)
Q Consensus 291 s~~e~~~~~~~Ea~a~G~pvi~----~~~~~~~--e~i~~~~~g~~~~~---~~~~l~~~i~~l~~~~~~~~~~~~~~~~ 361 (390)
+.+.+++|||++|+|+|+ .+..+.. +.+.+...|+.++. +++.++ ++++|+. .++++++.++
T Consensus 307 ----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~----~ll~~~~-~~~~~~~~~~ 377 (398)
T 3oti_A 307 ----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR----RLIGDES-LRTAAREVRE 377 (398)
T ss_dssp ----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH----HHHHCHH-HHHHHHHHHH
T ss_pred ----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH----HHHcCHH-HHHHHHHHHH
Confidence 345789999999999999 4556777 88888888998864 455554 8888988 8999988887
Q ss_pred HHHhhhcCHHHHHHHHHHHH
Q psy12587 362 NRFNEKFSFQAFSIQLNTIV 381 (390)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~ 381 (390)
+.. +..+++.+++.+.+++
T Consensus 378 ~~~-~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 378 EMV-ALPTPAETVRRIVERI 396 (398)
T ss_dssp HHH-TSCCHHHHHHHHHHHH
T ss_pred HHH-hCCCHHHHHHHHHHHh
Confidence 775 7889999988887764
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=155.71 Aligned_cols=269 Identities=16% Similarity=0.134 Sum_probs=175.4
Q ss_pred Hhh-cCCCEEEEccccc-c--hhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHH-HhcCcceEEEccHhH
Q psy12587 72 WYS-EKPDLVFCDLVSI-C--IPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEW-TTCKADKIVVNSEFT 146 (390)
Q Consensus 72 ~~~-~~~Dvi~~~~~~~-~--~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ad~ii~~s~~~ 146 (390)
+++ .+||+|++++... . ..+++..++|++ +++..... ... .+-....+. +-+.+|.++++|+..
T Consensus 89 ~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~-h~eaglrs------~~~----~~pee~nR~~~~~~a~~~~~~te~~ 157 (385)
T 4hwg_A 89 VLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIF-HMEAGNRC------FDQ----RVPEEINRKIIDHISDVNITLTEHA 157 (385)
T ss_dssp HHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEE-EESCCCCC------SCT----TSTHHHHHHHHHHHCSEEEESSHHH
T ss_pred HHHhcCCcEEEEECCchHHHHHHHHHHhCCCEE-EEeCCCcc------ccc----cCcHHHHHHHHHhhhceeecCCHHH
Confidence 344 9999999987332 2 223344459964 44432110 000 011112222 235689999999999
Q ss_pred HHHHHHHhccCCCCceeecCCCC-CCCCCC--CCCccchhhhcCCCCCCCCeEEEEeeccc---ccCCHHHHHHHHHHHH
Q psy12587 147 KSVVQATFRSLDHKCLDILYPSV-YTEGLE--KTTPEPIENVLNPLPGKEDIVFLSINRYE---RKKNLELAIYSLNSLR 220 (390)
Q Consensus 147 ~~~~~~~~~~~~~~~~~vi~~~~-~~~~~~--~~~~~~~~~~~~~l~~~~~~~i~~~g~~~---~~K~~~~ll~a~~~l~ 220 (390)
++.+.+. +.+++++.+++|+. |..... .......++.++ ++. +++++++.||.+ ..+++..+++++..+.
T Consensus 158 ~~~l~~~--G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lg-l~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~ 233 (385)
T 4hwg_A 158 RRYLIAE--GLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLS-LTP-KQYFLISSHREENVDVKNNLKELLNSLQMLI 233 (385)
T ss_dssp HHHHHHT--TCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTT-CCT-TSEEEEEECCC-----CHHHHHHHHHHHHHH
T ss_pred HHHHHHc--CCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcC-CCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHH
Confidence 9998886 56577899999864 422211 112234555554 333 567777777753 3367889999999987
Q ss_pred hhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHc-C-C--CCcEEEecCCChHHHHHHHHhcceEEeCCCCCCC
Q psy12587 221 SRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKL-K-L--SDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHF 296 (390)
Q Consensus 221 ~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~-~-l--~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~ 296 (390)
++. + +.+++... +.+.+.++++ + + .++|.+.+.+++.++..+|+.||+++.+|
T Consensus 234 ~~~-~-----~~vv~p~~------------p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~S----- 290 (385)
T 4hwg_A 234 KEY-N-----FLIIFSTH------------PRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDS----- 290 (385)
T ss_dssp HHH-C-----CEEEEEEC------------HHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEECC-----
T ss_pred hcC-C-----eEEEEECC------------hHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEECC-----
Confidence 653 3 66665432 3345555554 3 2 36899999999999999999999999766
Q ss_pred CccHHhhhhcCCCEEEecCC-CcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHH-HhhhcCHHHHH
Q psy12587 297 GIVPIEAMFCKRPVIAVNSG-GPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNR-FNEKFSFQAFS 374 (390)
Q Consensus 297 ~~~~~Ea~a~G~pvi~~~~~-~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 374 (390)
|....||+++|+|+|+.+.. +.+|.++.| ++.++..|.+++++++.++++++. .++.|++++..+ . +..+.++++
T Consensus 291 Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv~~d~~~i~~ai~~ll~d~~-~~~~m~~~~~~~~g-~g~aa~rI~ 367 (385)
T 4hwg_A 291 GTITEEASILNLPALNIREAHERPEGMDAG-TLIMSGFKAERVLQAVKTITEEHD-NNKRTQGLVPDYNE-AGLVSKKIL 367 (385)
T ss_dssp TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-CCEECCSSHHHHHHHHHHHHTTCB-TTBCCSCCCHHHHT-CCCHHHHHH
T ss_pred ccHHHHHHHcCCCEEEcCCCccchhhhhcC-ceEEcCCCHHHHHHHHHHHHhChH-HHHHhhccCCCCCC-CChHHHHHH
Confidence 55679999999999997653 356777665 667775599999999999999988 776665544443 2 445555565
Q ss_pred HHHHHHH
Q psy12587 375 IQLNTIV 381 (390)
Q Consensus 375 ~~~~~~~ 381 (390)
+.+.+.+
T Consensus 368 ~~l~~~~ 374 (385)
T 4hwg_A 368 RIVLSYV 374 (385)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5555544
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2.6e-17 Score=150.04 Aligned_cols=161 Identities=11% Similarity=0.081 Sum_probs=113.2
Q ss_pred CCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEE-EcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEec
Q psy12587 192 KEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVV-AGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLT 270 (390)
Q Consensus 192 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i-~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g 270 (390)
+.+.++++.|+..... .+.+..++..+. ..+ +++++ +|.+... +.++ .++++|.+.+
T Consensus 246 ~~~~v~v~~Gs~~~~~-~~~~~~~~~al~-~~~------~~~v~~~g~~~~~--------~~l~------~~~~~v~~~~ 303 (415)
T 3rsc_A 246 DLPVVLVSLGTTFNDR-PGFFRDCARAFD-GQP------WHVVMTLGGQVDP--------AALG------DLPPNVEAHR 303 (415)
T ss_dssp CCCEEEEECTTTSCCC-HHHHHHHHHHHT-TSS------CEEEEECTTTSCG--------GGGC------CCCTTEEEES
T ss_pred CCCEEEEECCCCCCCh-HHHHHHHHHHHh-cCC------cEEEEEeCCCCCh--------HHhc------CCCCcEEEEe
Confidence 4677888889876443 223333333332 222 56655 5654332 2221 2467999999
Q ss_pred CCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecC----CCcccceecCcceeeecC---CHHHHHHHHH
Q psy12587 271 SPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS----GGPKESVVDGRTGFLCES---NEEAFAKAMK 343 (390)
Q Consensus 271 ~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~----~~~~e~i~~~~~g~~~~~---~~~~l~~~i~ 343 (390)
++++. ++|..||++|..+ ...+++|||++|+|+|+.+. ....+.+.+.+.|..++. +++++++++.
T Consensus 304 ~~~~~---~ll~~ad~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~ 376 (415)
T 3rsc_A 304 WVPHV---KVLEQATVCVTHG----GMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVG 376 (415)
T ss_dssp CCCHH---HHHHHEEEEEESC----CHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHH
T ss_pred cCCHH---HHHhhCCEEEECC----cHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHH
Confidence 99876 7899999999754 23688999999999999543 334556666667877754 7899999999
Q ss_pred HHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHh
Q psy12587 344 KIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNN 383 (390)
Q Consensus 344 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
++++|++ .++++++.+.+.. +..+++..++.+.+++.+
T Consensus 377 ~ll~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 377 AVAADPA-LLARVEAMRGHVR-RAGGAARAADAVEAYLAR 414 (415)
T ss_dssp HHHTCHH-HHHHHHHHHHHHH-HSCHHHHHHHHHHHHHHH
T ss_pred HHHcCHH-HHHHHHHHHHHHH-hcCHHHHHHHHHHHHhhc
Confidence 9999988 8888888777765 678888888888777654
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.7e-17 Score=145.67 Aligned_cols=327 Identities=12% Similarity=0.040 Sum_probs=183.5
Q ss_pred CcchhhhHhh-HhhhhcCCceeec-CCcccc-ccCCCcceEEecccccccc-----------c----hhhHHH-HHHH--
Q psy12587 3 GATARLTITA-TAWGATGPRTTAH-DHCFKE-TKDGTLPVKVIGDWLPRNI-----------F----GKFYAL-CMYL-- 61 (390)
Q Consensus 3 GG~~~~~~~l-~~L~~~G~~V~~~-~~~~~~-~~~~~~~i~~~~~~~~~~~-----------~----~~~~~~-~~~~-- 61 (390)
+|.......+ ++|.++||+|+++ .....+ ....++.+..+........ . .....+ ..++
T Consensus 11 ~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (384)
T 2p6p_A 11 PATVFALAPLATAARNAGHQVVMAANQDMGPVVTGVGLPAVATTDLPIRHFITTDREGRPEAIPSDPVAQARFTGRWFAR 90 (384)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEESCSSCHHHHHHBCTTSCBCCCCCSHHHHHHHHHHHHHH
T ss_pred cchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhCCCEEEEeCCcchHHHHhhhcccCccccCcchHHHHHHHHHHHHh
Confidence 5666778889 9999999999988 222211 1223455554432110000 0 001111 1101
Q ss_pred --HHHHHHHHHHHhh-cCCCEEEEccccc-chhHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHh---c
Q psy12587 62 --RMIVIALYVAWYS-EKPDLVFCDLVSI-CIPILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTT---C 134 (390)
Q Consensus 62 --~~~~~~~~~~~~~-~~~Dvi~~~~~~~-~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 134 (390)
....... ..+++ .+||+|+++.... +..+++..++|++.+.|++.... .........+.....+.-+ +
T Consensus 91 ~~~~~~~~l-~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~ 165 (384)
T 2p6p_A 91 MAASSLPRM-LDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDAD----GIHPGADAELRPELSELGLERLP 165 (384)
T ss_dssp HHHHHHHHH-HHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCT----TTHHHHHHHTHHHHHHTTCSSCC
T ss_pred hHHHHHHHH-HHHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcccc----hhhHHHHHHHHHHHHHcCCCCCC
Confidence 1111111 13445 8999999986422 23344555699998887653210 0000000000011111101 1
Q ss_pred CcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeeccccc-------C
Q psy12587 135 KADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERK-------K 207 (390)
Q Consensus 135 ~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~-------K 207 (390)
.++.+++.+....+... ..+..++..++ .+. .....+.+. -..+.+.++++.|++... +
T Consensus 166 ~~~~~l~~~~~~~~~~~----~~~~~~~~~~~--~~~-------~~~~~~~l~-~~~~~~~v~v~~Gs~~~~~~~~~~~~ 231 (384)
T 2p6p_A 166 APDLFIDICPPSLRPAN----AAPARMMRHVA--TSR-------QCPLEPWMY-TRDTRQRVLVTSGSRVAKESYDRNFD 231 (384)
T ss_dssp CCSEEEECSCGGGSCTT----SCCCEECCCCC--CCC-------CCBCCHHHH-CCCSSCEEEEECSSSSSCCSSCCCCT
T ss_pred CCCeEEEECCHHHCCCC----CCCCCceEecC--CCC-------CCCCCchhh-cCCCCCEEEEECCCCCccccccccHH
Confidence 15677776654322100 01011222222 110 011111111 012346788999998765 5
Q ss_pred CHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceE
Q psy12587 208 NLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCI 287 (390)
Q Consensus 208 ~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~ 287 (390)
.+..+++++..+ +++++++++++.. +.++ . ++++|.+ |+++.. ++|..||++
T Consensus 232 ~~~~~~~al~~~----------~~~~~~~~g~~~~--------~~l~----~--~~~~v~~-~~~~~~---~~l~~~d~~ 283 (384)
T 2p6p_A 232 FLRGLAKDLVRW----------DVELIVAAPDTVA--------EALR----A--EVPQARV-GWTPLD---VVAPTCDLL 283 (384)
T ss_dssp THHHHHHHHHTT----------TCEEEEECCHHHH--------HHHH----H--HCTTSEE-ECCCHH---HHGGGCSEE
T ss_pred HHHHHHHHHhcC----------CcEEEEEeCCCCH--------HhhC----C--CCCceEE-cCCCHH---HHHhhCCEE
Confidence 667777777543 2677776543210 2222 2 2578999 999754 688999999
Q ss_pred EeCCCCCCCCccHHhhhhcCCCEEEecCCC----cccceecCcceeeecC---CHHHHHHHHHHHhcCChhHHHHHHHHH
Q psy12587 288 IYTPSNEHFGIVPIEAMFCKRPVIAVNSGG----PKESVVDGRTGFLCES---NEEAFAKAMKKIVDNDGNIIQQFSQFG 360 (390)
Q Consensus 288 v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~----~~e~i~~~~~g~~~~~---~~~~l~~~i~~l~~~~~~~~~~~~~~~ 360 (390)
|..+ .+++++|||++|+|+|+.+..+ ..+.+.+...|+.++. ++++++++|.++++|++ .++++++.+
T Consensus 284 v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~~~ 358 (384)
T 2p6p_A 284 VHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKDT-YARRAQDLS 358 (384)
T ss_dssp EECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCHH-HHHHHHHHH
T ss_pred EeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCHH-HHHHHHHHH
Confidence 9753 4568999999999999988643 5555666668888863 78999999999999988 888888877
Q ss_pred HHHHhhhcCHHHHHHHHHHHHH
Q psy12587 361 FNRFNEKFSFQAFSIQLNTIVN 382 (390)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
.+.. ..-..+..++.+.+++.
T Consensus 359 ~~~~-~~~~~~~~~~~i~~~~~ 379 (384)
T 2p6p_A 359 REIS-GMPLPATVVTALEQLAH 379 (384)
T ss_dssp HHHH-TSCCHHHHHHHHHHHHH
T ss_pred HHHH-hCCCHHHHHHHHHHHhh
Confidence 7665 55677777766665543
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.67 E-value=3.5e-15 Score=136.84 Aligned_cols=157 Identities=10% Similarity=0.080 Sum_probs=115.8
Q ss_pred CCeEEEEeecccc-----cCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEE
Q psy12587 193 EDIVFLSINRYER-----KKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVL 267 (390)
Q Consensus 193 ~~~~i~~~g~~~~-----~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~ 267 (390)
.+.++++.|+... .+.+..+++++..+ ++++++.+++... +.++ .++++|.
T Consensus 267 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~----------~~~~v~~~g~~~~--------~~l~------~~~~~v~ 322 (441)
T 2yjn_A 267 RRRVCLTLGISSRENSIGQVSIEELLGAVGDV----------DAEIIATFDAQQL--------EGVA------NIPDNVR 322 (441)
T ss_dssp SCEEEEEC----------CCSTTTTHHHHHTS----------SSEEEECCCTTTT--------SSCS------SCCSSEE
T ss_pred CCEEEEECCCCcccccChHHHHHHHHHHHHcC----------CCEEEEEECCcch--------hhhc------cCCCCEE
Confidence 4678889999865 47888888888654 2677776655432 1111 3467999
Q ss_pred EecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCC----cccceecCcceeeecC---CHHHHHH
Q psy12587 268 FLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGG----PKESVVDGRTGFLCES---NEEAFAK 340 (390)
Q Consensus 268 ~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~----~~e~i~~~~~g~~~~~---~~~~l~~ 340 (390)
+.+++++. ++|..||++|.. +.+.++.|||++|+|+|+.+..+ ..+.+.+...|+.++. +++++++
T Consensus 323 ~~~~~~~~---~ll~~ad~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~ 395 (441)
T 2yjn_A 323 TVGFVPMH---ALLPTCAATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRE 395 (441)
T ss_dssp ECCSCCHH---HHGGGCSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHH
T ss_pred EecCCCHH---HHHhhCCEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHH
Confidence 99999975 578999999973 34578999999999999988732 4555666678888764 8899999
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q psy12587 341 AMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVN 382 (390)
Q Consensus 341 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
+|.++++|+. .++++++.+.+.. +..+.+..++.+.+++.
T Consensus 396 ~i~~ll~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 396 SVKRVLDDPA-HRAGAARMRDDML-AEPSPAEVVGICEELAA 435 (441)
T ss_dssp HHHHHHHCHH-HHHHHHHHHHHHH-TSCCHHHHHHHHHHHHH
T ss_pred HHHHHhcCHH-HHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH
Confidence 9999999988 8888888777765 67888888888777654
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.63 E-value=4.8e-14 Score=128.68 Aligned_cols=160 Identities=14% Similarity=0.153 Sum_probs=109.4
Q ss_pred CCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEE-EEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEec
Q psy12587 192 KEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKL-VVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLT 270 (390)
Q Consensus 192 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l-~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g 270 (390)
+.+.++++.|+.. ....+.+.+++..+.+. ++++ +++|.+... +.+. .++++|.+.+
T Consensus 254 ~~~~v~v~~Gs~~-~~~~~~~~~~~~al~~~-------~~~~~~~~g~~~~~--------~~~~------~~~~~v~~~~ 311 (424)
T 2iya_A 254 GRPVLLIALGSAF-TDHLDFYRTCLSAVDGL-------DWHVVLSVGRFVDP--------ADLG------EVPPNVEVHQ 311 (424)
T ss_dssp SCCEEEEECCSSS-CCCHHHHHHHHHHHTTC-------SSEEEEECCTTSCG--------GGGC------SCCTTEEEES
T ss_pred CCCEEEEEcCCCC-cchHHHHHHHHHHHhcC-------CcEEEEEECCcCCh--------HHhc------cCCCCeEEec
Confidence 3567888889886 33444444444444332 2566 456765432 2221 2467899999
Q ss_pred CCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCC----cccceecCcceeeecC---CHHHHHHHHH
Q psy12587 271 SPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGG----PKESVVDGRTGFLCES---NEEAFAKAMK 343 (390)
Q Consensus 271 ~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~----~~e~i~~~~~g~~~~~---~~~~l~~~i~ 343 (390)
++++. ++|..||++|..+ ..++++||+++|+|+|+.+..+ ..+.+.+.+.|+.++. +.++++++|.
T Consensus 312 ~~~~~---~~l~~~d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~ 384 (424)
T 2iya_A 312 WVPQL---DILTKASAFITHA----GMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVL 384 (424)
T ss_dssp SCCHH---HHHTTCSEEEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHH
T ss_pred CCCHH---HHHhhCCEEEECC----chhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHH
Confidence 99876 6899999998633 3478999999999999987642 3344555667887753 8899999999
Q ss_pred HHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q psy12587 344 KIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVN 382 (390)
Q Consensus 344 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
+++++++ .++++++.+.+.. +....+..++.+.+++.
T Consensus 385 ~ll~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 385 AVASDPG-VAERLAAVRQEIR-EAGGARAAADILEGILA 421 (424)
T ss_dssp HHHHCHH-HHHHHHHHHHHHH-TSCHHHHHHHHHHHHHH
T ss_pred HHHcCHH-HHHHHHHHHHHHH-hcCcHHHHHHHHHHHHh
Confidence 9999988 7888777666554 45566666666655543
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-14 Score=133.91 Aligned_cols=265 Identities=8% Similarity=0.034 Sum_probs=168.8
Q ss_pred Hhh-cCCCEEEEcccccchhHHH---hhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHH
Q psy12587 72 WYS-EKPDLVFCDLVSICIPILQ---AKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTK 147 (390)
Q Consensus 72 ~~~-~~~Dvi~~~~~~~~~~~~~---~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~ 147 (390)
.++ .++||++--+..+...... .+..|+-++.-+...-.. +...|++++-....-
T Consensus 344 ~Ir~d~IDILVdL~g~t~~~~i~~aa~RpAPVQvs~lGyp~TTG---------------------l~~iDY~i~D~~~~~ 402 (631)
T 3q3e_A 344 VCESNGAAIFYMPSIGMDMTTIFASNTRLAPIQAIALGHPATTH---------------------SDFIEYVIVEDDYVG 402 (631)
T ss_dssp HHHHHTCSEEEESCCSSSHHHHHHTTSCCSSEEEEECSSCSCCC---------------------CTTCCEEEEEGGGCC
T ss_pred HHHhcCCCEEEECCCCCCchhHHHHhCCCchheEeccCCCcccC---------------------cccCCEEEeCCCCCC
Confidence 344 8999998855433222222 223788877765322100 223466665332110
Q ss_pred HHHHHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCC-CCeEEEEeecccccCCHHHHHHHHHHHHhhcccc
Q psy12587 148 SVVQATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGK-EDIVFLSINRYERKKNLELAIYSLNSLRSRLSDE 226 (390)
Q Consensus 148 ~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~ 226 (390)
-...| .+++..+|+..-. +.+......+..++ ++.+ +.++|+.+++ ..|..+.+++++.++.++.|+
T Consensus 403 --~~~~y----sEklirLP~~~~~--~~p~~~~p~r~~~~-lp~~~G~v~Fg~fn~--~~Ki~p~~l~~WarIL~~vP~- 470 (631)
T 3q3e_A 403 --SEECF----SETLLRLPKDALP--YVPSALAPEKVDYL-LRENPEVVNIGIAST--TMKLNPYFLEALKAIRDRAKV- 470 (631)
T ss_dssp --CGGGC----SSEEEEECTTSSC--CCCCTTCCSSCCCC-CCSCCSEEEEEEEEC--STTCCHHHHHHHHHHHHHCSS-
T ss_pred --cccCc----eeeEEECCCCccc--cCCcccCCcccccc-CCcCCCeEEEEECCc--cccCCHHHHHHHHHHHHhCCC-
Confidence 02222 5788888864211 11111111112221 2331 3566777776 568899999999999999885
Q ss_pred cccceEEE--EEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhh
Q psy12587 227 MKTHVKLV--VAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAM 304 (390)
Q Consensus 227 ~~~~~~l~--i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~ 304 (390)
..+. ++|..... ...+.+.+.+.|+++++.|.|.++..+....|+.+|+++.|+.+. .|++.+|||
T Consensus 471 ----s~L~l~~~g~~~g~-------~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy~-GgtTtlEAL 538 (631)
T 3q3e_A 471 ----KVHFHFALGQSNGI-------THPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCDMMVNPFPFG-NTNGIIDMV 538 (631)
T ss_dssp ----EEEEEEEESSCCGG-------GHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCSEEECCSSSC-CSHHHHHHH
T ss_pred ----cEEEEEecCCCchh-------hHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCcEEEeCCccc-CChHHHHHH
Confidence 4443 36743211 034444556778888999999999999999999999999998664 499999999
Q ss_pred hcCCCEEEecCCCccccee------cCccee-eecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhh--hcCHHHHHH
Q psy12587 305 FCKRPVIAVNSGGPKESVV------DGRTGF-LCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNE--KFSFQAFSI 375 (390)
Q Consensus 305 a~G~pvi~~~~~~~~e~i~------~~~~g~-~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 375 (390)
+||+|||+........-+. -|-.++ +.. |.+++++...++.+|++ .+++++++.++.... -|+ ..++
T Consensus 539 wmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA~-d~eeYv~~Av~La~D~~-~l~~LR~~Lr~~~~~spLFd--~~~~ 614 (631)
T 3q3e_A 539 TLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIAN-TVDEYVERAVRLAENHQ-ERLELRRYIIENNGLNTLFT--GDPR 614 (631)
T ss_dssp HTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEES-SHHHHHHHHHHHHHCHH-HHHHHHHHHHHSCCHHHHTC--SCCT
T ss_pred HcCCCEEeccCCcHHHHhHHHHHHhcCCCcceecC-CHHHHHHHHHHHhCCHH-HHHHHHHHHHHHhhhCCCcc--hhHH
Confidence 9999999987655544332 233443 445 89999999999999999 999999988877543 333 3445
Q ss_pred HHHHHHHhhh
Q psy12587 376 QLNTIVNNML 385 (390)
Q Consensus 376 ~~~~~~~~~~ 385 (390)
++.+.|++++
T Consensus 615 ~~e~~ye~~~ 624 (631)
T 3q3e_A 615 PMGQVFLEKL 624 (631)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555555444
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=9.1e-14 Score=125.87 Aligned_cols=158 Identities=13% Similarity=0.113 Sum_probs=101.9
Q ss_pred CCCeEEEEeecccccC-CHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEec
Q psy12587 192 KEDIVFLSINRYERKK-NLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLT 270 (390)
Q Consensus 192 ~~~~~i~~~g~~~~~K-~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g 270 (390)
+.+.++++.|++...+ +.+.+.+++..+.+. +..+++.+.+... + ....+++++.+.+
T Consensus 236 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~-------~~~~v~~~~~~~~--------~------~~~~~~~~v~~~~ 294 (400)
T 4amg_A 236 GRRRIAVTLGSIDALSGGIAKLAPLFSEVADV-------DAEFVLTLGGGDL--------A------LLGELPANVRVVE 294 (400)
T ss_dssp TCCEEEECCCSCC--CCSSSTTHHHHHHGGGS-------SSEEEEECCTTCC--------C------CCCCCCTTEEEEC
T ss_pred CCcEEEEeCCcccccCccHHHHHHHHHHhhcc-------CceEEEEecCccc--------c------ccccCCCCEEEEe
Confidence 3567778888876544 334445555555443 2555555544332 1 1123578999999
Q ss_pred CCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCC----cccceecCcceeeecCCHHHHHHHHHHHh
Q psy12587 271 SPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGG----PKESVVDGRTGFLCESNEEAFAKAMKKIV 346 (390)
Q Consensus 271 ~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~----~~e~i~~~~~g~~~~~~~~~l~~~i~~l~ 346 (390)
+++.. ++|..+|++|.- +..+++.||+++|+|+|+.+..+ ..+.+.+.+.|+.++ +.+..+++|.+++
T Consensus 295 ~~p~~---~lL~~~~~~v~h----~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~-~~~~~~~al~~lL 366 (400)
T 4amg_A 295 WIPLG---ALLETCDAIIHH----GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAE-AGSLGAEQCRRLL 366 (400)
T ss_dssp CCCHH---HHHTTCSEEEEC----CCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECC-TTTCSHHHHHHHH
T ss_pred ecCHH---HHhhhhhheecc----CCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcC-CCCchHHHHHHHH
Confidence 99876 578999998853 34568999999999999976533 334455555677776 4455678899999
Q ss_pred cCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHH
Q psy12587 347 DNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTI 380 (390)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
+|+. .+++.++-+.+. ...-+....++.+.++
T Consensus 367 ~d~~-~r~~a~~l~~~~-~~~~~~~~~a~~le~l 398 (400)
T 4amg_A 367 DDAG-LREAALRVRQEM-SEMPPPAETAAXLVAL 398 (400)
T ss_dssp HCHH-HHHHHHHHHHHH-HTSCCHHHHHHHHHHH
T ss_pred cCHH-HHHHHHHHHHHH-HcCCCHHHHHHHHHHh
Confidence 9988 777666555444 3555777776666543
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=6.1e-14 Score=126.95 Aligned_cols=155 Identities=12% Similarity=0.117 Sum_probs=106.7
Q ss_pred CCCeEEEEeeccc-ccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEec
Q psy12587 192 KEDIVFLSINRYE-RKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLT 270 (390)
Q Consensus 192 ~~~~~i~~~g~~~-~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g 270 (390)
+.+.++++.|+.. ..+.+..+++++..+ ++++++.++.... + ..+.+++|.+.+
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~----------~~~vv~~~g~~~~--------~-------~~~~~~~v~~~~ 274 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ----------GRRVVLSSGWAGL--------G-------RIDEGDDCLVVG 274 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHT----------TCCEEEECTTTTC--------C-------CSSCCTTEEEES
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhC----------CCEEEEEeCCccc--------c-------cccCCCCEEEec
Confidence 4567888889987 566667777777654 1556665443321 1 123468999999
Q ss_pred CCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCc----ccceecCcceeeecC---CHHHHHHHHH
Q psy12587 271 SPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGP----KESVVDGRTGFLCES---NEEAFAKAMK 343 (390)
Q Consensus 271 ~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~----~e~i~~~~~g~~~~~---~~~~l~~~i~ 343 (390)
+++.. .+|..||++|..+ ...++.||+++|+|+|+.+..+- .+.+.+.+.|..++. +.+++.+++.
T Consensus 275 ~~~~~---~ll~~~d~~v~~g----G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~ 347 (404)
T 3h4t_A 275 EVNHQ---VLFGRVAAVVHHG----GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALA 347 (404)
T ss_dssp SCCHH---HHGGGSSEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHH
T ss_pred CCCHH---HHHhhCcEEEECC----cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHH
Confidence 99875 5889999999644 23689999999999999865432 233445556777653 7999999999
Q ss_pred HHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q psy12587 344 KIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVN 382 (390)
Q Consensus 344 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
++++ ++ .++++++.+.... + -..+..++.+.++++
T Consensus 348 ~ll~-~~-~~~~~~~~~~~~~-~-~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 348 TALT-PG-IRARAAAVAGTIR-T-DGTTVAAKLLLEAIS 382 (404)
T ss_dssp HHTS-HH-HHHHHHHHHTTCC-C-CHHHHHHHHHHHHHH
T ss_pred HHhC-HH-HHHHHHHHHHHHh-h-hHHHHHHHHHHHHHh
Confidence 9998 66 7777766555443 3 456666666665554
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.48 E-value=2.9e-12 Score=116.42 Aligned_cols=154 Identities=10% Similarity=0.067 Sum_probs=103.4
Q ss_pred CCeEEEEeeccc-ccCCHHHHHHHHHHHHhhcccccccceEEEEE-cCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEec
Q psy12587 193 EDIVFLSINRYE-RKKNLELAIYSLNSLRSRLSDEMKTHVKLVVA-GGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLT 270 (390)
Q Consensus 193 ~~~~i~~~g~~~-~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~-G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g 270 (390)
++.++++.|+.. ..+..+.++++++.+. .+++++ |.+... . ..+++++.+.+
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~~----------~~~v~~~g~~~~~----------~------~~~~~~v~~~~ 291 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAHG----------RRVILSRGWADLV----------L------PDDGADCFAIG 291 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHTT----------CCEEECTTCTTCC----------C------SSCGGGEEECS
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHCC----------CeEEEEeCCCccc----------c------cCCCCCEEEeC
Confidence 467888999984 6777777888887652 344444 655321 0 12457899999
Q ss_pred CCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCC----cccceecCcceeeecC---CHHHHHHHHH
Q psy12587 271 SPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGG----PKESVVDGRTGFLCES---NEEAFAKAMK 343 (390)
Q Consensus 271 ~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~----~~e~i~~~~~g~~~~~---~~~~l~~~i~ 343 (390)
++++.+ +|..||++|..+ ..++++||+++|+|+|+.+..+ ..+.+.+.+.|+.++. +.++++++|.
T Consensus 292 ~~~~~~---~l~~~d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~ 364 (415)
T 1iir_A 292 EVNHQV---LFGRVAAVIHHG----GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALA 364 (415)
T ss_dssp SCCHHH---HGGGSSEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHH
T ss_pred cCChHH---HHhhCCEEEeCC----ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHH
Confidence 999864 689999999743 3469999999999999987643 3455556667887753 8899999999
Q ss_pred HHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhh
Q psy12587 344 KIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLD 386 (390)
Q Consensus 344 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (390)
++ ++++ .++++++.+.+.. . ..-+++..+.++++++
T Consensus 365 ~l-~~~~-~~~~~~~~~~~~~-~----~~~~~~~~~~i~~~~~ 400 (415)
T 1iir_A 365 TA-LTPE-THARATAVAGTIR-T----DGAAVAARLLLDAVSR 400 (415)
T ss_dssp HH-TSHH-HHHHHHHHHHHSC-S----CHHHHHHHHHHHHHHT
T ss_pred HH-cCHH-HHHHHHHHHHHHh-h----cChHHHHHHHHHHHHh
Confidence 99 8776 6666665554432 3 3334444445554444
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=99.43 E-value=1e-11 Score=116.82 Aligned_cols=252 Identities=11% Similarity=0.076 Sum_probs=170.3
Q ss_pred hHHHHHhcCcceEEEccHhHHHHHHH-----HhccCCCCceeecCCCCCCCCCC----CC--------------------
Q psy12587 127 KLEEWTTCKADKIVVNSEFTKSVVQA-----TFRSLDHKCLDILYPSVYTEGLE----KT-------------------- 177 (390)
Q Consensus 127 ~~~~~~~~~ad~ii~~s~~~~~~~~~-----~~~~~~~~~~~vi~~~~~~~~~~----~~-------------------- 177 (390)
.+.+.++..|+.|-++|+...+.++. .+... +.++.-+-|||++..+- |.
T Consensus 394 nMa~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~-p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~ 472 (796)
T 2c4m_A 394 HMAWIACYAAYSINGVAALHTEIIKAETLADWYALW-PEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDE 472 (796)
T ss_dssp EHHHHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHC-GGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGG
T ss_pred cHHHHHHHhcCceeeccHHHHHHhhhhhhhhHHHcC-ccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHH
Confidence 34566788999999999999998884 23323 57899999999887772 11
Q ss_pred --------Cc---------------cc----hhhhcCCCC-CCCCeEEEEeecccccCCHHH-HHHHHHHHHh--hcccc
Q psy12587 178 --------TP---------------EP----IENVLNPLP-GKEDIVFLSINRYERKKNLEL-AIYSLNSLRS--RLSDE 226 (390)
Q Consensus 178 --------~~---------------~~----~~~~~~~l~-~~~~~~i~~~g~~~~~K~~~~-ll~a~~~l~~--~~~~~ 226 (390)
+. .. +++..+ ++ ..+.+.++++.|+..+|+.+. ++..+..+.+ ..|+.
T Consensus 473 l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~G-l~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~ 551 (796)
T 2c4m_A 473 LKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQG-IEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLT 551 (796)
T ss_dssp GGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCC
T ss_pred HHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCC
Confidence 00 00 112222 22 236788999999999999999 8888877753 22211
Q ss_pred cccceEEEEEcCCCCCCcchhHHHHHHHHHHH----HcCCCC--cEEEecCCChHHHHHHHHhcceEEeCCC--CCCCCc
Q psy12587 227 MKTHVKLVVAGGYDPHNIENVEYYKELGVLVK----KLKLSD--NVLFLTSPSDAAKISLFKFCHCIIYTPS--NEHFGI 298 (390)
Q Consensus 227 ~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~----~~~l~~--~v~~~g~~~~~e~~~~~~~adv~v~ps~--~e~~~~ 298 (390)
...++.+++.|.+.+.....+...+.+...++ .-..++ +|.|+...+..-...++..||+.+.||. .|.+|+
T Consensus 552 ~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGT 631 (796)
T 2c4m_A 552 DIPARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGT 631 (796)
T ss_dssp SSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCH
T ss_pred CCCCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCch
Confidence 11248999999998764333333333555554 113456 7888887777777899999999999999 899999
Q ss_pred cHHhhhhcCCCEEEecCCCcccceec--CcceeeecC---CHHHHHHH---HHHHhcCChhHHHHHHHHHHHHHhhhcCH
Q psy12587 299 VPIEAMFCKRPVIAVNSGGPKESVVD--GRTGFLCES---NEEAFAKA---MKKIVDNDGNIIQQFSQFGFNRFNEKFSF 370 (390)
Q Consensus 299 ~~~Ea~a~G~pvi~~~~~~~~e~i~~--~~~g~~~~~---~~~~l~~~---i~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (390)
+=+-+|..|++.|++-.|...|+.++ .+||++|-. ++.++... ..-.-.++. ++++-+ ......|||
T Consensus 632 s~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~y~a~~~y~~~~~--~~~vvd---~~~~g~fs~ 706 (796)
T 2c4m_A 632 SNMKFMMNGALTLGTMDGANVEIVDSVGEENAYIFGARVEELPALRESYKPYELYETVPG--LKRALD---ALDNGTLND 706 (796)
T ss_dssp HHHHHHHTTCEEEEESSTHHHHHHHHHCGGGSEEESCCTTTHHHHHHTCCHHHHHHHSTT--HHHHHH---TTTSSSSCC
T ss_pred HHHHHHHcCCeEEeccCCeEeehhhhcCCCcEEEecCchhhHHHHHHhhChHHHhhcCHH--HHHHHH---HHHcCCCCC
Confidence 99999999999999887877777644 469999965 44444432 111112232 222222 223457888
Q ss_pred HHHHHHHHHHHHhhhh
Q psy12587 371 QAFSIQLNTIVNNMLD 386 (390)
Q Consensus 371 ~~~~~~~~~~~~~~~~ 386 (390)
+.- ..+.++|++++.
T Consensus 707 ~~~-~~y~~Ly~~L~~ 721 (796)
T 2c4m_A 707 NNS-GLFYDLKHSLIH 721 (796)
T ss_dssp TTC-CHHHHHHHHHHS
T ss_pred CCH-HHHHHHHHHHHh
Confidence 765 678888888764
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=99.41 E-value=1.5e-10 Score=109.35 Aligned_cols=209 Identities=10% Similarity=0.080 Sum_probs=148.1
Q ss_pred HHHHHhcCcceEEEccHhHHHHHHHH-----hccCCCCceeecCCCCCCCCCC----CC---------------------
Q psy12587 128 LEEWTTCKADKIVVNSEFTKSVVQAT-----FRSLDHKCLDILYPSVYTEGLE----KT--------------------- 177 (390)
Q Consensus 128 ~~~~~~~~ad~ii~~s~~~~~~~~~~-----~~~~~~~~~~vi~~~~~~~~~~----~~--------------------- 177 (390)
+...++..|+.|-++|+...+.+++. +... ++++.-+-|||++..+- |.
T Consensus 430 Ma~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~-p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~ 508 (824)
T 2gj4_A 430 MAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELE-PHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLR 508 (824)
T ss_dssp HHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHC-GGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGG
T ss_pred HHHHHHHhcCceeeEcHHHHHHHhhHHhHHHHHcC-hhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHH
Confidence 44567889999999999999888642 3323 57899999999887761 10
Q ss_pred ------Cccch-------------------hhhcCCCC-CCCCeEEEEeecccccCCHHHH-HHHHHHHHh--hcccccc
Q psy12587 178 ------TPEPI-------------------ENVLNPLP-GKEDIVFLSINRYERKKNLELA-IYSLNSLRS--RLSDEMK 228 (390)
Q Consensus 178 ------~~~~~-------------------~~~~~~l~-~~~~~~i~~~g~~~~~K~~~~l-l~a~~~l~~--~~~~~~~ 228 (390)
....+ .+..+ ++ +.+.+.++++.|+..+|+.+++ +..+..+.+ ..|+...
T Consensus 509 ~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~G-l~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~ 587 (824)
T 2gj4_A 509 KLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYK-VHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFV 587 (824)
T ss_dssp GGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCC
T ss_pred HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCC
Confidence 00111 11122 22 2367889999999999999997 777777641 3321111
Q ss_pred cceEEEEEcCCCCCCcchhHHHHHHHHHHHHc----CCCC--cEEEecCCChHHHHHHHHhcceEEeCCC--CCCCCccH
Q psy12587 229 THVKLVVAGGYDPHNIENVEYYKELGVLVKKL----KLSD--NVLFLTSPSDAAKISLFKFCHCIIYTPS--NEHFGIVP 300 (390)
Q Consensus 229 ~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~----~l~~--~v~~~g~~~~~e~~~~~~~adv~v~ps~--~e~~~~~~ 300 (390)
.+..+++.|.+.+.....+...+.+...++.. .+++ +|.|+...+..-...++..||+.+.||. .|.+|++=
T Consensus 588 ~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~ 667 (824)
T 2gj4_A 588 VPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGN 667 (824)
T ss_dssp CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHH
T ss_pred CCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHH
Confidence 13799999999876444444444466666544 2345 7888877777777889999999999999 89999999
Q ss_pred HhhhhcCCCEEEecCCCccccee--cCcceeeecCCHHHH
Q psy12587 301 IEAMFCKRPVIAVNSGGPKESVV--DGRTGFLCESNEEAF 338 (390)
Q Consensus 301 ~Ea~a~G~pvi~~~~~~~~e~i~--~~~~g~~~~~~~~~l 338 (390)
+-||..|++.|++--|...|+.+ ..+||+++...++++
T Consensus 668 MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG~~~~ev 707 (824)
T 2gj4_A 668 MKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDV 707 (824)
T ss_dssp HHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHH
T ss_pred HHHHHcCceEEEEecCccchhhhccCCCCEEEeCCcHHHH
Confidence 99999999999988777767654 356899887655555
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.39 E-value=1.3e-11 Score=112.28 Aligned_cols=135 Identities=10% Similarity=0.060 Sum_probs=94.2
Q ss_pred CCeEEEEeeccc---ccCCHHHHHHHHHHHHhhcccccccceEEEEE-cCCCCCCcchhHHHHHHHHHHHHcCCCCcEEE
Q psy12587 193 EDIVFLSINRYE---RKKNLELAIYSLNSLRSRLSDEMKTHVKLVVA-GGYDPHNIENVEYYKELGVLVKKLKLSDNVLF 268 (390)
Q Consensus 193 ~~~~i~~~g~~~---~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~-G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~ 268 (390)
++.++++.|+.. ..+.+..+++++..+. .+++++ |.+.. + . ..+++++.+
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~----------~~~v~~~g~~~~---------~-~------~~~~~~v~~ 290 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQG----------RRVILSRGWTEL---------V-L------PDDRDDCFA 290 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHTT----------CCEEEECTTTTC---------C-C------SCCCTTEEE
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHCC----------CeEEEEeCCccc---------c-c------cCCCCCEEE
Confidence 466778889874 3555666677766541 445554 65532 1 0 134678999
Q ss_pred ecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCC----cccceecCcceeeec--C-CHHHHHHH
Q psy12587 269 LTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGG----PKESVVDGRTGFLCE--S-NEEAFAKA 341 (390)
Q Consensus 269 ~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~----~~e~i~~~~~g~~~~--~-~~~~l~~~ 341 (390)
.++++.. ++|..||++|.- +...++.||+++|+|+|+.+..+ ..+.+.+.+.|..++ . +.++++++
T Consensus 291 ~~~~~~~---~ll~~~d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~ 363 (416)
T 1rrv_A 291 IDEVNFQ---ALFRRVAAVIHH----GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAA 363 (416)
T ss_dssp ESSCCHH---HHGGGSSEEEEC----CCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHH
T ss_pred eccCChH---HHhccCCEEEec----CChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHH
Confidence 9999865 578999999973 23469999999999999977532 334455556787775 3 88999999
Q ss_pred HHHHhcCChhHHHHHHHHHHH
Q psy12587 342 MKKIVDNDGNIIQQFSQFGFN 362 (390)
Q Consensus 342 i~~l~~~~~~~~~~~~~~~~~ 362 (390)
|.++ +|+. .++++++.+++
T Consensus 364 i~~l-~~~~-~~~~~~~~~~~ 382 (416)
T 1rrv_A 364 LTTV-LAPE-TRARAEAVAGM 382 (416)
T ss_dssp HHHH-TSHH-HHHHHHHHTTT
T ss_pred HHHh-hCHH-HHHHHHHHHHH
Confidence 9999 8877 66666654443
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.1e-11 Score=116.60 Aligned_cols=252 Identities=10% Similarity=0.047 Sum_probs=171.4
Q ss_pred HHHHHhcCcceEEEccHhHHHHHHH-----HhccCCCCceeecCCCCCCCCCC----CC---------------------
Q psy12587 128 LEEWTTCKADKIVVNSEFTKSVVQA-----TFRSLDHKCLDILYPSVYTEGLE----KT--------------------- 177 (390)
Q Consensus 128 ~~~~~~~~ad~ii~~s~~~~~~~~~-----~~~~~~~~~~~vi~~~~~~~~~~----~~--------------------- 177 (390)
+.+.++..|+.|-++|+...+.+++ .+... +.++.-+-|||++..+- |.
T Consensus 406 Ma~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~-p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~ 484 (796)
T 1l5w_A 406 MANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLW-PNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLI 484 (796)
T ss_dssp HHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHC-GGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGG
T ss_pred HHHHHHHhcCccccccHHHHHHHHhHHhhHHHHhC-ccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHH
Confidence 4566788999999999999998874 23323 56899999999765441 10
Q ss_pred ------Cc---------------cc----hhhhcCCCC-CCCCeEEEEeecccccCCHHH-HHHHHHHHHh--hcccccc
Q psy12587 178 ------TP---------------EP----IENVLNPLP-GKEDIVFLSINRYERKKNLEL-AIYSLNSLRS--RLSDEMK 228 (390)
Q Consensus 178 ------~~---------------~~----~~~~~~~l~-~~~~~~i~~~g~~~~~K~~~~-ll~a~~~l~~--~~~~~~~ 228 (390)
+. .. +++..+ ++ ..+.+.++++.|+..+|+.+. ++..+..+.+ .+|+...
T Consensus 485 ~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~G-l~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~ 563 (796)
T 1l5w_A 485 NLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTG-IEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADR 563 (796)
T ss_dssp GGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCC
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCC
Confidence 00 00 122223 22 236788999999999999999 7888777654 1221111
Q ss_pred cceEEEEEcCCCCCCcchhHHHHHHHHHHH----HcCCCC--cEEEecCCChHHHHHHHHhcceEEeCCC--CCCCCccH
Q psy12587 229 THVKLVVAGGYDPHNIENVEYYKELGVLVK----KLKLSD--NVLFLTSPSDAAKISLFKFCHCIIYTPS--NEHFGIVP 300 (390)
Q Consensus 229 ~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~----~~~l~~--~v~~~g~~~~~e~~~~~~~adv~v~ps~--~e~~~~~~ 300 (390)
.++.+++.|.+.+.....+...+.+...++ .-..++ +|.|+...+..-...++..||+.+.||. .|.+|++=
T Consensus 564 ~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~ 643 (796)
T 1l5w_A 564 VPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGN 643 (796)
T ss_dssp CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHH
T ss_pred CCeEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHH
Confidence 249999999998764333333333555554 113456 7888877777767899999999999999 89999999
Q ss_pred HhhhhcCCCEEEecCCCcccceec--CcceeeecCCHHHHHHHHH------HHhcCChhHHHHHHHHHHHHHhhhcCHHH
Q psy12587 301 IEAMFCKRPVIAVNSGGPKESVVD--GRTGFLCESNEEAFAKAMK------KIVDNDGNIIQQFSQFGFNRFNEKFSFQA 372 (390)
Q Consensus 301 ~Ea~a~G~pvi~~~~~~~~e~i~~--~~~g~~~~~~~~~l~~~i~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (390)
+-+|..|++.|++-.|...|+.++ .+||++|-.+++++.+.-. .+..+.. .++++-+++ ....|||+.
T Consensus 644 MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~~y~a~~~y~~~~-~~~~vvd~~---~~g~fs~~~ 719 (796)
T 1l5w_A 644 MKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDK-VLDAVLKEL---ESGKYSDGD 719 (796)
T ss_dssp HHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHHCCCHHHHHHHCH-HHHHHHHHH---HHTTTTTTC
T ss_pred HHHHHcCCeeecCcCCeeeehhhccCCCcEEEecCCHHHHHHHHHcccCHHHHhhcCH-HHHHHHHHH---HcCCCCCCc
Confidence 999999999998888888777654 4699999767777664322 1222222 233333333 346788877
Q ss_pred HHHHHHHHHHhhhh
Q psy12587 373 FSIQLNTIVNNMLD 386 (390)
Q Consensus 373 ~~~~~~~~~~~~~~ 386 (390)
- ..+.++|++++.
T Consensus 720 ~-~~y~~Ly~~L~~ 732 (796)
T 1l5w_A 720 K-HAFDQMLHSIGK 732 (796)
T ss_dssp T-TTTHHHHHHTST
T ss_pred H-HHHHHHHHHHhc
Confidence 4 778888888764
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.7e-12 Score=101.38 Aligned_cols=131 Identities=9% Similarity=0.081 Sum_probs=96.0
Q ss_pred CCeEEEEeeccc---ccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEe
Q psy12587 193 EDIVFLSINRYE---RKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFL 269 (390)
Q Consensus 193 ~~~~i~~~g~~~---~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~ 269 (390)
.+.++++.|++. +.|.+..+++++..+ + .++++++++... + .++++|.+.
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~----~------~~~~~~~g~~~~--------~---------~~~~~v~~~ 73 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI----P------QKVLWRFDGNKP--------D---------TLGLNTRLY 73 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS----S------SEEEEECCSSCC--------T---------TCCTTEEEE
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC----C------CeEEEEECCcCc--------c---------cCCCcEEEe
Confidence 567889999985 556667777776543 1 566666655432 1 235789999
Q ss_pred cCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCC----CcccceecCcceeeecC---CHHHHHHHH
Q psy12587 270 TSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSG----GPKESVVDGRTGFLCES---NEEAFAKAM 342 (390)
Q Consensus 270 g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~----~~~e~i~~~~~g~~~~~---~~~~l~~~i 342 (390)
|++++.++..+ ..||++|.. +.+.+++|||++|+|+|+.+.. ...+.+.+...|+.++. ++++++++|
T Consensus 74 ~~~~~~~~l~~-~~ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i 148 (170)
T 2o6l_A 74 KWIPQNDLLGH-PKTRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLNAL 148 (170)
T ss_dssp SSCCHHHHHTS-TTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHH
T ss_pred cCCCHHHHhcC-CCcCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHHHH
Confidence 99998653322 999999974 3458999999999999999864 33556677778988864 789999999
Q ss_pred HHHhcCChhHHHHH
Q psy12587 343 KKIVDNDGNIIQQF 356 (390)
Q Consensus 343 ~~l~~~~~~~~~~~ 356 (390)
.+++++++ .++++
T Consensus 149 ~~ll~~~~-~~~~a 161 (170)
T 2o6l_A 149 KRVINDPS-YKENV 161 (170)
T ss_dssp HHHHHCHH-HHHHH
T ss_pred HHHHcCHH-HHHHH
Confidence 99998876 44443
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=9.6e-09 Score=99.08 Aligned_cols=186 Identities=10% Similarity=0.178 Sum_probs=140.1
Q ss_pred hhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCC
Q psy12587 183 ENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKL 262 (390)
Q Consensus 183 ~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l 262 (390)
+..++ ||+ +.++|+.+.++ .|=.+..++++.++.++.|+ -+|++....... ...+++.+++.|+
T Consensus 514 R~~~g-Lp~-~~v~f~~fN~~--~Ki~p~~~~~W~~IL~~vP~-----S~L~Ll~~~~~~-------~~~l~~~~~~~gi 577 (723)
T 4gyw_A 514 RSQYG-LPE-DAIVYCNFNQL--YKIDPSTLQMWANILKRVPN-----SVLWLLRFPAVG-------EPNIQQYAQNMGL 577 (723)
T ss_dssp GGGGT-CCT-TSEEEECCSCG--GGCCHHHHHHHHHHHHHCSS-----EEEEEEETTGGG-------HHHHHHHHHHTTC
T ss_pred hhhcC-CCC-CCEEEEeCCcc--ccCCHHHHHHHHHHHHhCCC-----CeEEEEeCcHHH-------HHHHHHHHHhcCC
Confidence 34444 454 66776666554 46788999999999999995 888887654321 2678888888887
Q ss_pred C-CcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccc-----eec-CcceeeecCCH
Q psy12587 263 S-DNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKES-----VVD-GRTGFLCESNE 335 (390)
Q Consensus 263 ~-~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~-----i~~-~~~g~~~~~~~ 335 (390)
+ ++|.|.+..+..+....++.+|+++-|..+ +.+++.+||+.+|+|||+-....+..- +.. |-..+++. |.
T Consensus 578 ~~~r~~f~~~~~~~~~l~~~~~~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~-~~ 655 (723)
T 4gyw_A 578 PQNRIIFSPVAPKEEHVRRGQLADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAK-NR 655 (723)
T ss_dssp CGGGEEEEECCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCS-SH
T ss_pred CcCeEEECCCCCHHHHHHHhCCCeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccC-CH
Confidence 4 689999999999999999999999976544 557899999999999999664322221 111 22233444 89
Q ss_pred HHHHHHHHHHhcCChhHHHHHHHHHHHHHhh--hcCHHHHHHHHHHHHHhhhhh
Q psy12587 336 EAFAKAMKKIVDNDGNIIQQFSQFGFNRFNE--KFSFQAFSIQLNTIVNNMLDK 387 (390)
Q Consensus 336 ~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 387 (390)
++..+...++.+|++ .+..+++.-++.... -|+.+.+++.+.+.|+++.++
T Consensus 656 ~~Y~~~a~~la~d~~-~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r 708 (723)
T 4gyw_A 656 QEYEDIAVKLGTDLE-YLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH 708 (723)
T ss_dssp HHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHH-HHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 888888777666533 689999999999999887543
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=2.9e-06 Score=77.50 Aligned_cols=145 Identities=10% Similarity=0.006 Sum_probs=88.0
Q ss_pred CCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEE-EEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEec
Q psy12587 192 KEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKL-VVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLT 270 (390)
Q Consensus 192 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l-~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g 270 (390)
+...+++..|+.... ..+.+.+.+..+.+.. .++ +.+|..... ...+.+.+. . ++++.+.+
T Consensus 270 ~~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~-------~~~lw~~~~~~~~-----~l~~~~~~~---~--~~~~~v~~ 331 (456)
T 2c1x_A 270 PTSVVYISFGTVTTP-PPAEVVALSEALEASR-------VPFIWSLRDKARV-----HLPEGFLEK---T--RGYGMVVP 331 (456)
T ss_dssp TTCEEEEECCSSCCC-CHHHHHHHHHHHHHHT-------CCEEEECCGGGGG-----GSCTTHHHH---H--TTTEEEES
T ss_pred CcceEEEecCccccC-CHHHHHHHHHHHHhcC-------CeEEEEECCcchh-----hCCHHHHhh---c--CCceEEec
Confidence 356777888887643 3344444444443321 333 444533210 000112211 1 36788899
Q ss_pred CCChHHHHHHHH--hcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCC----cccceecC-cceeeecC---CHHHHHH
Q psy12587 271 SPSDAAKISLFK--FCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGG----PKESVVDG-RTGFLCES---NEEAFAK 340 (390)
Q Consensus 271 ~~~~~e~~~~~~--~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~----~~e~i~~~-~~g~~~~~---~~~~l~~ 340 (390)
++++. ++|. .+|++|. -+..++++||+++|+|+|+.+..+ ....+.+. +.|..++. +.+++.+
T Consensus 332 w~pq~---~vL~h~~~~~fvt----h~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~ 404 (456)
T 2c1x_A 332 WAPQA---EVLAHEAVGAFVT----HCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMS 404 (456)
T ss_dssp CCCHH---HHHTSTTEEEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHH
T ss_pred CCCHH---HHhcCCcCCEEEe----cCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCcCHHHHHH
Confidence 99986 5788 6778884 234568999999999999977532 23344444 57777752 7899999
Q ss_pred HHHHHhcCChhHHHHHHHHHHHH
Q psy12587 341 AMKKIVDNDGNIIQQFSQFGFNR 363 (390)
Q Consensus 341 ~i~~l~~~~~~~~~~~~~~~~~~ 363 (390)
+|.+++++++ .+++++++++.
T Consensus 405 ~i~~ll~~~~--~~~~r~~a~~l 425 (456)
T 2c1x_A 405 CFDQILSQEK--GKKLRENLRAL 425 (456)
T ss_dssp HHHHHHHSHH--HHHHHHHHHHH
T ss_pred HHHHHHCCCc--HHHHHHHHHHH
Confidence 9999998763 34455555443
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=98.63 E-value=4.3e-06 Score=77.13 Aligned_cols=149 Identities=10% Similarity=0.040 Sum_probs=89.3
Q ss_pred CCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEE-EcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecC
Q psy12587 193 EDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVV-AGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTS 271 (390)
Q Consensus 193 ~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i-~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~ 271 (390)
...+++..|+... .....+.+.+..+.+. +.+++. +|...... ......+.+.+. . ++++.+.++
T Consensus 295 ~~vv~vs~GS~~~-~~~~~~~~~~~~l~~~-------~~~~l~~~~~~~~~~-~~~~l~~~~~~~---~--~~~~~v~~~ 360 (482)
T 2pq6_A 295 GSVVYVNFGSTTV-MTPEQLLEFAWGLANC-------KKSFLWIIRPDLVIG-GSVIFSSEFTNE---I--ADRGLIASW 360 (482)
T ss_dssp TCEEEEECCSSSC-CCHHHHHHHHHHHHHT-------TCEEEEECCGGGSTT-TGGGSCHHHHHH---H--TTTEEEESC
T ss_pred CceEEEecCCccc-CCHHHHHHHHHHHHhc-------CCcEEEEEcCCcccc-ccccCcHhHHHh---c--CCCEEEEee
Confidence 5677788888653 2344444444444432 244444 44321000 000001333322 2 468999999
Q ss_pred CChHHHHHHHHhcce--EEeCCCCCCCCccHHhhhhcCCCEEEecCCC----cccce-ecCcceeeecC--CHHHHHHHH
Q psy12587 272 PSDAAKISLFKFCHC--IIYTPSNEHFGIVPIEAMFCKRPVIAVNSGG----PKESV-VDGRTGFLCES--NEEAFAKAM 342 (390)
Q Consensus 272 ~~~~e~~~~~~~adv--~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~----~~e~i-~~~~~g~~~~~--~~~~l~~~i 342 (390)
+++. .+|+.+++ +|. -+..++++||+++|+|+|+.+..+ ....+ +..+.|+.+.. +.+++.++|
T Consensus 361 ~pq~---~~L~h~~~~~~vt----h~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~~i 433 (482)
T 2pq6_A 361 CPQD---KVLNHPSIGGFLT----HCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREELAKLI 433 (482)
T ss_dssp CCHH---HHHTSTTEEEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCHHHHHHHH
T ss_pred cCHH---HHhcCCCCCEEEe----cCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCCCCHHHHHHHH
Confidence 9987 48877665 653 234568999999999999987632 22333 24557777753 899999999
Q ss_pred HHHhcCChhHHHHHHHHHHHHH
Q psy12587 343 KKIVDNDGNIIQQFSQFGFNRF 364 (390)
Q Consensus 343 ~~l~~~~~~~~~~~~~~~~~~~ 364 (390)
.+++++++ .+.+++++++..
T Consensus 434 ~~ll~~~~--~~~~r~~a~~l~ 453 (482)
T 2pq6_A 434 NEVIAGDK--GKKMKQKAMELK 453 (482)
T ss_dssp HHHHTSHH--HHHHHHHHHHHH
T ss_pred HHHHcCCc--HHHHHHHHHHHH
Confidence 99998764 355666665543
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=7.9e-05 Score=68.22 Aligned_cols=139 Identities=10% Similarity=0.035 Sum_probs=83.4
Q ss_pred CCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEE-EEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecC
Q psy12587 193 EDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLV-VAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTS 271 (390)
Q Consensus 193 ~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~-i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~ 271 (390)
...+++..|+....-+.+.+.+++..+.+. +.+++ .+|.+....+ +.+.+.... ++++.+.++
T Consensus 276 ~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~-------~~~~l~~~~~~~~~l~------~~~~~~~~~---~~~~~v~~w 339 (463)
T 2acv_A 276 KSVVFLCFGSMGVSFGPSQIREIALGLKHS-------GVRFLWSNSAEKKVFP------EGFLEWMEL---EGKGMICGW 339 (463)
T ss_dssp TCEEEEECCSSCCCCCHHHHHHHHHHHHHH-------TCEEEEECCCCGGGSC------TTHHHHHHH---HCSEEEESS
T ss_pred CceEEEEeccccccCCHHHHHHHHHHHHhC-------CCcEEEEECCCcccCC------hhHHHhhcc---CCCEEEEcc
Confidence 567778888876222334444444444332 14444 4454200000 222222210 256888899
Q ss_pred CChHHHHHHHH--hcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCC----cccc-eecCcceeee-c-------C-CH
Q psy12587 272 PSDAAKISLFK--FCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGG----PKES-VVDGRTGFLC-E-------S-NE 335 (390)
Q Consensus 272 ~~~~e~~~~~~--~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~----~~e~-i~~~~~g~~~-~-------~-~~ 335 (390)
+++. .+|. .+|++|.- +..++++||+++|+|+|+.+..+ .... +...+.|+.+ . . +.
T Consensus 340 ~pq~---~vL~h~~~~~fvth----~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~ 412 (463)
T 2acv_A 340 APQV---EVLAHKAIGGFVSH----CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAA 412 (463)
T ss_dssp CCHH---HHHHSTTEEEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCH
T ss_pred CCHH---HHhCCCccCeEEec----CCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccH
Confidence 9976 4676 57778742 34568999999999999977532 2333 3555677777 2 5 78
Q ss_pred HHHHHHHHHHhcC-ChhHHHH
Q psy12587 336 EAFAKAMKKIVDN-DGNIIQQ 355 (390)
Q Consensus 336 ~~l~~~i~~l~~~-~~~~~~~ 355 (390)
+++.++|.+++++ +. .+++
T Consensus 413 ~~l~~ai~~ll~~~~~-~r~~ 432 (463)
T 2acv_A 413 EEIEKGLKDLMDKDSI-VHKK 432 (463)
T ss_dssp HHHHHHHHHHTCTTCT-HHHH
T ss_pred HHHHHHHHHHHhccHH-HHHH
Confidence 9999999999974 44 4443
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=2.4e-05 Score=70.95 Aligned_cols=204 Identities=13% Similarity=0.053 Sum_probs=110.9
Q ss_pred HhcCcceEEEccHhHHHH-HHHHhccCCCCceeecCCCCCCCCCC-CCCccchhhhcCCCCCCCCeEEEEeecccccCCH
Q psy12587 132 TTCKADKIVVNSEFTKSV-VQATFRSLDHKCLDILYPSVYTEGLE-KTTPEPIENVLNPLPGKEDIVFLSINRYERKKNL 209 (390)
Q Consensus 132 ~~~~ad~ii~~s~~~~~~-~~~~~~~~~~~~~~vi~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~ 209 (390)
.+..++.+++.|-...+. ..+.+... ..++..|.+-.....-. ........+.++. ..++..+++..|+.... ..
T Consensus 212 ~~~~~~~vl~ns~~eLE~~~~~~~~~~-~~~v~~vGPl~~~~~~~~~~~~~~~~~wLd~-~~~~~vVyvsfGS~~~~-~~ 288 (454)
T 3hbf_A 212 ELPRANAVAINSFATIHPLIENELNSK-FKLLLNVGPFNLTTPQRKVSDEHGCLEWLDQ-HENSSVVYISFGSVVTP-PP 288 (454)
T ss_dssp HGGGSSCEEESSCGGGCHHHHHHHHTT-SSCEEECCCHHHHSCCSCCCCTTCHHHHHHT-SCTTCEEEEECCSSCCC-CH
T ss_pred hhccCCEEEECChhHhCHHHHHHHHhc-CCCEEEECCcccccccccccchHHHHHHHhc-CCCCceEEEecCCCCcC-CH
Confidence 366789999988654432 22222111 12444444321110000 1112233444421 22356777888887643 34
Q ss_pred HHHHHHHHHHHhhcccccccceEEE-EEcCCCCCCcchhHHHHHHH-HHHHHcCCCCcEEEecCCChHHHHHHHHhcceE
Q psy12587 210 ELAIYSLNSLRSRLSDEMKTHVKLV-VAGGYDPHNIENVEYYKELG-VLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCI 287 (390)
Q Consensus 210 ~~ll~a~~~l~~~~~~~~~~~~~l~-i~G~~~~~~~~~~~y~~~~~-~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~ 287 (390)
+.+.+.+..+.+.. .+++ .+|.... +.+. ...++ .++++.+.+++++. .++..+++.
T Consensus 289 ~~~~el~~~l~~~~-------~~flw~~~~~~~---------~~lp~~~~~~--~~~~~~vv~w~Pq~---~vL~h~~v~ 347 (454)
T 3hbf_A 289 HELTALAESLEECG-------FPFIWSFRGDPK---------EKLPKGFLER--TKTKGKIVAWAPQV---EILKHSSVG 347 (454)
T ss_dssp HHHHHHHHHHHHHC-------CCEEEECCSCHH---------HHSCTTHHHH--TTTTEEEESSCCHH---HHHHSTTEE
T ss_pred HHHHHHHHHHHhCC-------CeEEEEeCCcch---------hcCCHhHHhh--cCCceEEEeeCCHH---HHHhhcCcC
Confidence 44445554444432 3444 4443210 1110 11111 24688888999986 688999943
Q ss_pred EeCCCCCCCCccHHhhhhcCCCEEEecCCC----cccceecC-cceeeecC---CHHHHHHHHHHHhcCChhHHHHHHHH
Q psy12587 288 IYTPSNEHFGIVPIEAMFCKRPVIAVNSGG----PKESVVDG-RTGFLCES---NEEAFAKAMKKIVDNDGNIIQQFSQF 359 (390)
Q Consensus 288 v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~----~~e~i~~~-~~g~~~~~---~~~~l~~~i~~l~~~~~~~~~~~~~~ 359 (390)
++-++ +..++++||+++|+|+|+.+..+ ....+.+. +.|+.+.. +.+++.++|.++++++ ..++++++
T Consensus 348 ~fvtH--~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~--~~~~~r~~ 423 (454)
T 3hbf_A 348 VFLTH--SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSSE--KGGIMRQK 423 (454)
T ss_dssp EEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSSH--HHHHHHHH
T ss_pred eEEec--CCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCCC--hHHHHHHH
Confidence 33232 23458999999999999977532 22334443 57777653 8999999999999874 34455555
Q ss_pred HHHH
Q psy12587 360 GFNR 363 (390)
Q Consensus 360 ~~~~ 363 (390)
+++.
T Consensus 424 a~~l 427 (454)
T 3hbf_A 424 IVKL 427 (454)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5444
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=0.00057 Score=62.82 Aligned_cols=78 Identities=13% Similarity=0.037 Sum_probs=54.6
Q ss_pred EEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCC----cccce-ecCcceeeec-----C-C
Q psy12587 266 VLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGG----PKESV-VDGRTGFLCE-----S-N 334 (390)
Q Consensus 266 v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~----~~e~i-~~~~~g~~~~-----~-~ 334 (390)
+.+.+++++. .+|+.+++.++-++ +..++++||+++|+|+|+.+..+ ....+ +.-+.|+.+. . +
T Consensus 341 ~~v~~w~Pq~---~vL~h~~v~~fvtH--gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~ 415 (480)
T 2vch_A 341 FVIPFWAPQA---QVLAHPSTGGFLTH--CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVR 415 (480)
T ss_dssp EEEESCCCHH---HHHHSTTEEEEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCC
T ss_pred EEEeCccCHH---HHhCCCCcCeEEec--ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccC
Confidence 4556799876 68999885332232 33468999999999999977532 22332 4545666653 4 7
Q ss_pred HHHHHHHHHHHhcC
Q psy12587 335 EEAFAKAMKKIVDN 348 (390)
Q Consensus 335 ~~~l~~~i~~l~~~ 348 (390)
.++++++|.+++++
T Consensus 416 ~~~l~~av~~vl~~ 429 (480)
T 2vch_A 416 REEVARVVKGLMEG 429 (480)
T ss_dssp HHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhcC
Confidence 89999999999974
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=1.5e-05 Score=67.28 Aligned_cols=96 Identities=15% Similarity=0.149 Sum_probs=64.9
Q ss_pred CCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCC
Q psy12587 193 EDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSP 272 (390)
Q Consensus 193 ~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~ 272 (390)
.+.++++.|......-...+++++. +. . -..++.|.+... ++++++.+++. +++.+.+++
T Consensus 157 ~~~ILv~~GG~d~~~l~~~vl~~L~---~~-~------~i~vv~G~~~~~-------~~~l~~~~~~~---~~v~v~~~~ 216 (282)
T 3hbm_A 157 KYDFFICMGGTDIKNLSLQIASELP---KT-K------IISIATSSSNPN-------LKKLQKFAKLH---NNIRLFIDH 216 (282)
T ss_dssp CEEEEEECCSCCTTCHHHHHHHHSC---TT-S------CEEEEECTTCTT-------HHHHHHHHHTC---SSEEEEESC
T ss_pred CCeEEEEECCCchhhHHHHHHHHhh---cC-C------CEEEEECCCchH-------HHHHHHHHhhC---CCEEEEeCH
Confidence 4456677787654432334444443 22 1 234566776542 36777766553 479999998
Q ss_pred ChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecC
Q psy12587 273 SDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS 315 (390)
Q Consensus 273 ~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~ 315 (390)
++. .++|+.||++|.+ .|.++.|++++|+|.|.-+.
T Consensus 217 ~~m--~~~m~~aDlvI~~-----gG~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 217 ENI--AKLMNESNKLIIS-----ASSLVNEALLLKANFKAICY 252 (282)
T ss_dssp SCH--HHHHHTEEEEEEE-----SSHHHHHHHHTTCCEEEECC
T ss_pred HHH--HHHHHHCCEEEEC-----CcHHHHHHHHcCCCEEEEeC
Confidence 765 7999999999973 25799999999999998764
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=98.17 E-value=0.00016 Score=63.62 Aligned_cols=102 Identities=14% Similarity=0.170 Sum_probs=69.4
Q ss_pred CCCeEEEEeec-ccccCCHH--HHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCC---CCc
Q psy12587 192 KEDIVFLSINR-YERKKNLE--LAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKL---SDN 265 (390)
Q Consensus 192 ~~~~~i~~~g~-~~~~K~~~--~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l---~~~ 265 (390)
+.+++++..|. ..+.|.+. .+.+++..+.++ ++++++.|+..+. +..++..+..+- ...
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~-------~~~vvl~g~~~e~--------~~~~~i~~~~~~~~~~~~ 243 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE-------GYQVVLFGSAKDH--------EAGNEILAALNTEQQAWC 243 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT-------TCEEEECCCGGGH--------HHHHHHHTTSCHHHHTTE
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHC-------CCeEEEEeChhhH--------HHHHHHHHhhhhccccce
Confidence 35677778887 54666654 788888888765 2788888765431 333333332210 123
Q ss_pred EEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEe
Q psy12587 266 VLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAV 313 (390)
Q Consensus 266 v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~ 313 (390)
+.+.|..+-.|+..+++.||++|... .|..-+ |.++|+|+|+-
T Consensus 244 ~~l~g~~sl~e~~ali~~a~l~I~~D----sg~~Hl-Aaa~g~P~v~l 286 (348)
T 1psw_A 244 RNLAGETQLDQAVILIAACKAIVTND----SGLMHV-AAALNRPLVAL 286 (348)
T ss_dssp EECTTTSCHHHHHHHHHTSSEEEEES----SHHHHH-HHHTTCCEEEE
T ss_pred EeccCcCCHHHHHHHHHhCCEEEecC----CHHHHH-HHHcCCCEEEE
Confidence 56788899999999999999999764 233444 99999999983
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00023 Score=62.46 Aligned_cols=102 Identities=13% Similarity=0.112 Sum_probs=72.4
Q ss_pred CCCeEEEEeecccccCCH--HHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEe
Q psy12587 192 KEDIVFLSINRYERKKNL--ELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFL 269 (390)
Q Consensus 192 ~~~~~i~~~g~~~~~K~~--~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~ 269 (390)
+.+++.+..|.-.+.|.+ +.+.+++..+.+++ .++++.|+..+. +..++..+..+ ...+.+.
T Consensus 184 ~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g-------~~vvl~g~~~e~--------~~~~~i~~~~~-~~~~~l~ 247 (349)
T 3tov_A 184 TDILIGFNIGSAVPEKRWPAERFAHVADYFGRLG-------YKTVFFGGPMDL--------EMVQPVVEQME-TKPIVAT 247 (349)
T ss_dssp TCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHT-------CEEEECCCTTTH--------HHHHHHHHTCS-SCCEECT
T ss_pred CCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCC-------CeEEEEeCcchH--------HHHHHHHHhcc-cccEEee
Confidence 356777777765556655 57888888887652 677777765442 44455555544 2446778
Q ss_pred cCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEec
Q psy12587 270 TSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVN 314 (390)
Q Consensus 270 g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~ 314 (390)
|..+-.|+..+++.||++|..- .|..-+ |.++|+|+|+--
T Consensus 248 g~~sl~e~~ali~~a~~~i~~D----sG~~Hl-Aaa~g~P~v~lf 287 (349)
T 3tov_A 248 GKFQLGPLAAAMNRCNLLITND----SGPMHV-GISQGVPIVALY 287 (349)
T ss_dssp TCCCHHHHHHHHHTCSEEEEES----SHHHHH-HHTTTCCEEEEC
T ss_pred CCCCHHHHHHHHHhCCEEEECC----CCHHHH-HHhcCCCEEEEE
Confidence 8899999999999999999753 255555 899999999943
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00049 Score=66.89 Aligned_cols=187 Identities=13% Similarity=0.173 Sum_probs=107.4
Q ss_pred hcCcceEEEccHhHHHHHHHHhccCCCCceeecCCCCCCCCCCCCC----ccchhhhcCCCCCCCCeEEEEeecccccC-
Q psy12587 133 TCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPSVYTEGLEKTT----PEPIENVLNPLPGKEDIVFLSINRYERKK- 207 (390)
Q Consensus 133 ~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~i~~~g~~~~~K- 207 (390)
.+..|.+++.|+...+.+.+.|+.. ..++.....+=....+.... ...+++.++ ++ .++.+|+|+-+++...
T Consensus 476 ~~~~D~~~~~s~~~~~~~~~~f~~~-~~~i~~~G~PR~D~l~~~~~~~~~~~~~~~~~~-~~-~~kk~ILyaPT~r~~~~ 552 (729)
T 3l7i_A 476 TSRWDYLISPNRYSTEIFRSAFWMD-EERILEIGYPRNDVLVNRANDQEYLDEIRTHLN-LP-SDKKVIMYAPTWRDDEF 552 (729)
T ss_dssp HTTCSEEEESSHHHHHHHHHHTCCC-GGGEEESCCGGGHHHHHSTTCHHHHHHHHHHTT-CC-SSCEEEEECCCCCGGGC
T ss_pred hccCCEEEeCCHHHHHHHHHHhCCC-cceEEEcCCCchHHHhcccchHHHHHHHHHHhC-CC-CCCeEEEEeeeeeCCcc
Confidence 5678999999999999999887632 34555554442222221111 123445554 33 4778899998876542
Q ss_pred ---C-----HHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHH
Q psy12587 208 ---N-----LELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKIS 279 (390)
Q Consensus 208 ---~-----~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~ 279 (390)
+ ...-++.+.+.... +..+++-.. ..+.......+..+.+.-... ..++.+
T Consensus 553 ~~~~~~~~~~~~~~~~l~~~l~~-------~~~li~r~H------------p~~~~~~~~~~~~~~~~~~~~--~~di~~ 611 (729)
T 3l7i_A 553 VSKGKYLFELKIDLDNLYKELGD-------DYVILLRMH------------YLISNALDLSGYENFAIDVSN--YNDVSE 611 (729)
T ss_dssp CGGGSSCCCCTTCHHHHHHHHTT-------TEEEEECCC------------HHHHTTCCCTTCTTTEEECTT--CSCHHH
T ss_pred ccccccccchhhHHHHHHHHcCC-------CeEEEEecC------------cchhccccccccCCcEEeCCC--CcCHHH
Confidence 1 11123333332221 366666432 222111111122344443332 235578
Q ss_pred HHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecC--C-------C-cccceecCcceeeecCCHHHHHHHHHHHhcCC
Q psy12587 280 LFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS--G-------G-PKESVVDGRTGFLCESNEEAFAKAMKKIVDND 349 (390)
Q Consensus 280 ~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~--~-------~-~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~ 349 (390)
+|..||++|.- ++.+++|++..++|||.... . | ..+ +.+...|.++. +.+++.++|.+....+
T Consensus 612 ll~~aD~lITD-----ySSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d-~~~~~pg~~~~-~~~eL~~~i~~~~~~~ 684 (729)
T 3l7i_A 612 LFLISDCLITD-----YSSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMN-YMEDLPGPIYT-EPYGLAKELKNLDKVQ 684 (729)
T ss_dssp HHHTCSEEEES-----SCTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSC-TTSSSSSCEES-SHHHHHHHHTTHHHHH
T ss_pred HHHHhCEEEee-----chHHHHhHHhhCCCEEEecCCHHHHhhccCCcccC-hhHhCCCCeEC-CHHHHHHHHhhhhccc
Confidence 99999999953 46789999999999998631 1 1 111 12223566666 8999999998876543
Q ss_pred h
Q psy12587 350 G 350 (390)
Q Consensus 350 ~ 350 (390)
.
T Consensus 685 ~ 685 (729)
T 3l7i_A 685 Q 685 (729)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.11 Score=40.35 Aligned_cols=318 Identities=12% Similarity=0.120 Sum_probs=172.3
Q ss_pred cchhhhHhh-HhhhhcCCceeec---CCcccccc---CCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhhcC
Q psy12587 4 ATARLTITA-TAWGATGPRTTAH---DHCFKETK---DGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYSEK 76 (390)
Q Consensus 4 G~~~~~~~l-~~L~~~G~~V~~~---~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (390)
|+..+.++. ..+.+.||+|+++ +..+.... ...+.+..+- ... ....++. . .+
T Consensus 16 gvtkfsleqrdwfiknghevtlvyakdksftrtsshdhksfsipvil---ake-------ydkalkl---------v-nd 75 (401)
T 1xv5_A 16 GVTKFSLEQRDWFIKNGHEVTLVYAKDKSFTRTSSHDHKSFSIPVIL---AKE-------YDKALKL---------V-ND 75 (401)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEECSSCCTTTTSSSCTTTCEEECT---TTC-------HHHHHHH---------H-TS
T ss_pred CceeeehhhhhhhhcCCcEEEEEEeccccccccccccCccccceeEe---hhh-------hHHHhhh---------h-cc
Confidence 556667777 8889999999987 33332222 1223333331 110 0011111 1 89
Q ss_pred CCEEEEcccccch------h-HHHhh---c--ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccH
Q psy12587 77 PDLVFCDLVSICI------P-ILQAK---Q--FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSE 144 (390)
Q Consensus 77 ~Dvi~~~~~~~~~------~-~~~~~---~--~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~ 144 (390)
.|+++.++.++.. - ..++. + +.+|++.|+...... ++-. -+ ....++||.++..|+
T Consensus 76 cdiliinsvpatsvqeatinnykklldnikpsirvvvyqhdhsvlsl------rrnl-----gl-eetvrradvifshsd 143 (401)
T 1xv5_A 76 CDILIINSVPATSVQEATINNYKKLLDNIKPSIRVVVYQHDHSVLSL------RRNL-----GL-EETVRRADVIFSHSD 143 (401)
T ss_dssp CSEEEEEECCBTTSCHHHHHHHHHHHHHSCTTSEEEEEECCCSHHHH------TTBS-----SH-HHHHHHCSEEEESCT
T ss_pred CcEEEEccCccchhHHHHHhhHHHHHhcCCCceEEEEEeccchhhhh------hhhc-----Ch-HHhhhhhceEEecCC
Confidence 9999988744321 1 11111 1 788999987432111 1100 11 234678999999875
Q ss_pred ---hHHHHHHHHhccCCCCceeecCCCCC----CCCCCCC-Cccchhhhc-CCCCCCCCeEEEEeecccccCCHHHHHHH
Q psy12587 145 ---FTKSVVQATFRSLDHKCLDILYPSVY----TEGLEKT-TPEPIENVL-NPLPGKEDIVFLSINRYERKKNLELAIYS 215 (390)
Q Consensus 145 ---~~~~~~~~~~~~~~~~~~~vi~~~~~----~~~~~~~-~~~~~~~~~-~~l~~~~~~~i~~~g~~~~~K~~~~ll~a 215 (390)
..+-.++++|+. .+..... +. .-.|+++ .-...+..+ ....+-+--+=-++||-..+||+-.+.+.
T Consensus 144 ngdfnkvlmkewype----tvslfdd-ieeaptvynfqppmdivkvrstywkdvseinmninrwigrtttwkgfyqmfdf 218 (401)
T 1xv5_A 144 NGDFNKVLMKEWYPE----TVSLFDD-IEEAPTVYNFQPPMDIVKVRSTYWKDVSEINMNINRWIGRTTTWKGFYQMFDF 218 (401)
T ss_dssp TSHHHHTHHHHHSCS----SCCSSSC-CCCCCCEEECCCCBCHHHHHHHHCCCGGGCEEEEEEEECCSCGGGCHHHHHHH
T ss_pred CCcHHHHHHHhhccc----hhhhhcc-hhhCCceeccCCCceeeeeehhhhccHHHhhcchhhhhcccchhHhHHHHhhH
Confidence 444456667652 2222111 10 0012221 111111111 00000011233588999999999999998
Q ss_pred HHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCC---------------Cc--EEEecCCChHHHH
Q psy12587 216 LNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLS---------------DN--VLFLTSPSDAAKI 278 (390)
Q Consensus 216 ~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~---------------~~--v~~~g~~~~~e~~ 278 (390)
-.+..+... -.-++-|-... +.+.. +++.|++ ++ -.++.-.-+.|+.
T Consensus 219 hekflkpag------kstvmeglers---------pafia-ikekgipyeyygnreidkmnlapnqpaqildcyinseml 282 (401)
T 1xv5_A 219 HEKFLKPAG------KSTVMEGLERS---------PAFIA-IKEKGIPYEYYGNREIDKMNLAPNQPAQILDCYINSEML 282 (401)
T ss_dssp HHHTTTTTT------CEEEEECCCCS---------HHHHH-HHHTTCCEEEECGGGGGGCCCSSSCCEEEESCCCHHHHH
T ss_pred HHHhcCccc------hhhhhhhhhcC---------CceEE-EcccCCchhhcCcchhhhhcCCCCCcchhhhheecHHHH
Confidence 887765432 23344443322 33332 2333332 11 2334444467788
Q ss_pred HHHHhcceEEeCCC------CCCCCccHHhhhhcCCCEEEecC-CCcc------cceecCcceee-ecC-CHHHHHHHHH
Q psy12587 279 SLFKFCHCIIYTPS------NEHFGIVPIEAMFCKRPVIAVNS-GGPK------ESVVDGRTGFL-CES-NEEAFAKAMK 343 (390)
Q Consensus 279 ~~~~~adv~v~ps~------~e~~~~~~~Ea~a~G~pvi~~~~-~~~~------e~i~~~~~g~~-~~~-~~~~l~~~i~ 343 (390)
+-|+.+......|. ..+.-.+-+|--|||+..|-... |..- .-+.....|++ ++. |.++--+.|.
T Consensus 283 ermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntpltshdsgiiwfdendmestferik 362 (401)
T 1xv5_A 283 ERMSKSGFGYQLSKLNQKYLQRSLEYTHLELGACGTIPVFWKSTGENLKFRVDNTPLTSHDSGIIWFDENDMESTFERIK 362 (401)
T ss_dssp HHHHTEEEEEECCCCCGGGCSSCCCHHHHHHHHHTSEEEEEHHHHHHSBCTTTCCBGGGSCCSCEEECTTCHHHHHHHHH
T ss_pred HHhhhcCcccchHHHHHHHHHhhhhhheeecccccceeeeecccCcceEEEecCCcccccCCceEEecCCchHHHHHHHH
Confidence 88888887766654 23455678999999987776442 2111 11223345544 666 9999999999
Q ss_pred HHhcCChhHHHHHHHHHHHHHhhhcCHHHHHH
Q psy12587 344 KIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSI 375 (390)
Q Consensus 344 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (390)
++.++.. ++.+-++.|+++.-++-+..-..+
T Consensus 363 elssdra-lydrerekayeflyqhqdssfcfk 393 (401)
T 1xv5_A 363 ELSSDRA-LYDREREKAYEFLYQHQDSSFCFK 393 (401)
T ss_dssp HHHTCHH-HHHHHHHHHHHHHHHHHBHHHHHH
T ss_pred Hhccchh-hhhHHHHHHHHHHHhcccccchhH
Confidence 9999988 999999999988755544444333
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0077 Score=52.19 Aligned_cols=133 Identities=11% Similarity=0.073 Sum_probs=83.1
Q ss_pred CCeEEEEeecccccCCHH--HHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEec
Q psy12587 193 EDIVFLSINRYERKKNLE--LAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLT 270 (390)
Q Consensus 193 ~~~~i~~~g~~~~~K~~~--~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g 270 (390)
.+.+++..|.-.+.|.+. .+.+.+..+.++ ++++++.++++.+ . +..++..+.. +++.+.|
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~-------~~~vvl~~g~~~e----~---~~~~~i~~~~---~~~~l~g 240 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADS-------GIRIKLPWGAPHE----E---ERAKRLAEGF---AYVEVLP 240 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTT-------CCEEEECCSSHHH----H---HHHHHHHTTC---TTEEECC
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHC-------CCcEEEecCCHHH----H---HHHHHHHhhC---CcccccC
Confidence 567777777766666554 777888777654 3777776333321 0 2233333332 3467789
Q ss_pred CCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecC-------CCcc---cceecCcceeeecC-CHHHHH
Q psy12587 271 SPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNS-------GGPK---ESVVDGRTGFLCES-NEEAFA 339 (390)
Q Consensus 271 ~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~-------~~~~---e~i~~~~~g~~~~~-~~~~l~ 339 (390)
..+-.|+..+++.||++|..- .|..-+ |.|+|+|+|+--. +... ..+. +... .... +++++.
T Consensus 241 ~~sl~el~ali~~a~l~I~~D----SG~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~-~~~~-cm~~I~~~~V~ 313 (326)
T 2gt1_A 241 KMSLEGVARVLAGAKFVVSVD----TGLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCR-APGN-ELSQLTANAVK 313 (326)
T ss_dssp CCCHHHHHHHHHTCSEEEEES----SHHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEE-CGGG-CGGGCCHHHHH
T ss_pred CCCHHHHHHHHHhCCEEEecC----CcHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEec-CCcc-cccCCCHHHHH
Confidence 999999999999999999753 255556 7779999998321 1111 1111 1111 1234 889999
Q ss_pred HHHHHHhcCC
Q psy12587 340 KAMKKIVDND 349 (390)
Q Consensus 340 ~~i~~l~~~~ 349 (390)
+++.++++.-
T Consensus 314 ~~i~~~l~~~ 323 (326)
T 2gt1_A 314 QFIEENAEKA 323 (326)
T ss_dssp HHHHHTTTTC
T ss_pred HHHHHHHHHh
Confidence 9998887653
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0019 Score=52.14 Aligned_cols=73 Identities=10% Similarity=0.095 Sum_probs=48.3
Q ss_pred cEEEecCCChHHHHHHHH-hcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCc--------ccceecCcceeeecCCH
Q psy12587 265 NVLFLTSPSDAAKISLFK-FCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGP--------KESVVDGRTGFLCESNE 335 (390)
Q Consensus 265 ~v~~~g~~~~~e~~~~~~-~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~--------~e~i~~~~~g~~~~~~~ 335 (390)
++...+++++ +..+|+ .||++|.- +...+++|++++|+|.|.-+.... .+.+.+...++.+ ++
T Consensus 115 ~v~v~~f~~~--m~~~l~~~AdlvIsh----aGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~--~~ 186 (224)
T 2jzc_A 115 KVIGFDFSTK--MQSIIRDYSDLVISH----AGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC--AP 186 (224)
T ss_dssp EEEECCSSSS--HHHHHHHHCSCEEES----SCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE--CS
T ss_pred eEEEeeccch--HHHHHHhcCCEEEEC----CcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc--CH
Confidence 4566677755 468999 99999963 245689999999999999765421 1223232234433 45
Q ss_pred HHHHHHHHHH
Q psy12587 336 EAFAKAMKKI 345 (390)
Q Consensus 336 ~~l~~~i~~l 345 (390)
+++.++|.++
T Consensus 187 ~~L~~~i~~l 196 (224)
T 2jzc_A 187 TETGLIAGLR 196 (224)
T ss_dssp CTTTHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666666666
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=92.94 E-value=2 Score=38.88 Aligned_cols=131 Identities=14% Similarity=0.150 Sum_probs=70.4
Q ss_pred CCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcch------------hHHHHHHHHHHHHcCCCCcEEEecCCCh
Q psy12587 207 KNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIEN------------VEYYKELGVLVKKLKLSDNVLFLTSPSD 274 (390)
Q Consensus 207 K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~------------~~y~~~~~~~~~~~~l~~~v~~~g~~~~ 274 (390)
+.+..+.+.+....+. .-+++|+|+|.-...-. ..=.+..+.+++++ ++.+.+.|.-.+
T Consensus 219 ~~i~~~~~~~g~~~~~-------~~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l--~~~~Vi~GD~td 289 (461)
T 4g65_A 219 NHIRSVMSELQRLEKP-------YRRIMIVGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEEL--ENTIVFCGDAAD 289 (461)
T ss_dssp TTHHHHHHHTTGGGSC-------CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC--TTSEEEESCTTC
T ss_pred chHHHHHHhhcccccc-------ccEEEEEcchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHC--CCceEEeccccc
Confidence 4666666665543221 24688888874320000 00003445555554 456778888888
Q ss_pred HHHHH--HHHhcceEEeCCCCCCCCc-cHHhhhhcCCCEEEecC--CCcccceecCcceeeecCCHHHHHHHHHHHhc
Q psy12587 275 AAKIS--LFKFCHCIIYTPSNEHFGI-VPIEAMFCKRPVIAVNS--GGPKESVVDGRTGFLCESNEEAFAKAMKKIVD 347 (390)
Q Consensus 275 ~e~~~--~~~~adv~v~ps~~e~~~~-~~~Ea~a~G~pvi~~~~--~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~ 347 (390)
.++.. =+..+|+++..+..+--.+ +.+-|-.+|++=+.+.. ..+.++++.......+.+ ....+..|.+.+.
T Consensus 290 ~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~vn~~~~~~l~~~~gid~visp-~~~~a~~I~~~i~ 366 (461)
T 4g65_A 290 QELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVLIQRGAYVDLVQGGVIDVAISP-QQATISALLTHVR 366 (461)
T ss_dssp HHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHCSSSSCEEECH-HHHHHHHHHHHHH
T ss_pred hhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccccccccchhhhhhccccceeeCH-HHHHHHHHHHHhh
Confidence 76543 3467899998766543333 34557778888666543 344555544333344442 2334555555543
|
| >4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A* | Back alignment and structure |
|---|
Probab=89.12 E-value=4.8 Score=29.91 Aligned_cols=69 Identities=9% Similarity=0.121 Sum_probs=39.3
Q ss_pred HHHHHhcceEEeCCCCCCCCccHHh---hhhcCCCEEEecC---C-Ccccceec---CcceeeecC-CHHHHHHHHHHHh
Q psy12587 278 ISLFKFCHCIIYTPSNEHFGIVPIE---AMFCKRPVIAVNS---G-GPKESVVD---GRTGFLCES-NEEAFAKAMKKIV 346 (390)
Q Consensus 278 ~~~~~~adv~v~ps~~e~~~~~~~E---a~a~G~pvi~~~~---~-~~~e~i~~---~~~g~~~~~-~~~~l~~~i~~l~ 346 (390)
...+..||+++.--. +.-+.+.+| |.+.|+||++--. + .++-++.. +..-.+.+. + +++.+.|.+.+
T Consensus 63 ~~~i~~aD~vvA~l~-~~d~Gt~~EiG~A~algkPV~~l~~~~~~~~ls~mi~G~~~~~~~~~~~Y~~-~el~~il~~f~ 140 (152)
T 4fyk_A 63 LNWLQQADVVVAEVT-QPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAE-GEVETMLDRYF 140 (152)
T ss_dssp HHHHHHCSEEEEECS-SCCHHHHHHHHHHHHTTCCEEEEECGGGSCCCCHHHHHHCCSSSEEEEECCT-TCHHHHHHHHH
T ss_pred HHHHHHCCEEEEeCC-CCCCCHHHHHHHHHHcCCeEEEEEeCCccchhHHHHcCCCCCCeEEEEEecH-HHHHHHHHHHH
Confidence 467899999887433 333345554 7789999999322 1 22212211 111222333 5 78888888776
Q ss_pred cC
Q psy12587 347 DN 348 (390)
Q Consensus 347 ~~ 348 (390)
+.
T Consensus 141 ~~ 142 (152)
T 4fyk_A 141 EA 142 (152)
T ss_dssp C-
T ss_pred Hh
Confidence 54
|
| >3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=82.82 E-value=1.9 Score=32.53 Aligned_cols=68 Identities=19% Similarity=0.151 Sum_probs=42.3
Q ss_pred HHHHHhcceEEeCCC-CCCCCccHHh---hhhcCCCEEEe--cC---CCc--------ccceec-------------Ccc
Q psy12587 278 ISLFKFCHCIIYTPS-NEHFGIVPIE---AMFCKRPVIAV--NS---GGP--------KESVVD-------------GRT 327 (390)
Q Consensus 278 ~~~~~~adv~v~ps~-~e~~~~~~~E---a~a~G~pvi~~--~~---~~~--------~e~i~~-------------~~~ 327 (390)
...+..||++|.--. .+.-+.+.+| |.+.|+||++- |. ++. .|..++ ..+
T Consensus 64 ~~~i~~aD~viA~ldg~~~D~Gt~~EiG~A~a~gkPVi~~~~D~R~~g~~~~~~~~~~~~~~e~~f~~~N~~~~G~i~~~ 143 (162)
T 3ehd_A 64 TENVLASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVALYTDSRQQGADNHQKLDALNEIAENQFHYLNLYTVGLIKLN 143 (162)
T ss_dssp HHHHHTCSEEEEECCSSSCCHHHHHHHHHHHHTTCCEEEECCCGGGCCTTCHHHHHHTTSTTCCCSCCCCHHHHHHHHTT
T ss_pred HHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEcCcccccCCcchhhhhhHHHhhhhhhhhhHHHhhhHHhC
Confidence 467899999876432 2222445555 78899999994 32 111 111111 127
Q ss_pred eeeecCCHHHHHHHHHHHh
Q psy12587 328 GFLCESNEEAFAKAMKKIV 346 (390)
Q Consensus 328 g~~~~~~~~~l~~~i~~l~ 346 (390)
|.++. +.+++.++|...+
T Consensus 144 g~~~~-~~~~~~~~l~~~~ 161 (162)
T 3ehd_A 144 GRVVS-SEEDLLEEIKQRL 161 (162)
T ss_dssp EEEES-SHHHHHHHHHHTC
T ss_pred CeEEe-CHHHHHHHHHHHh
Confidence 88887 8899999888765
|
| >3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901} | Back alignment and structure |
|---|
Probab=81.54 E-value=12 Score=26.70 Aligned_cols=106 Identities=13% Similarity=0.108 Sum_probs=66.0
Q ss_pred eEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHh---cceEEeCCCC-C-CCCccHHhhhh
Q psy12587 231 VKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKF---CHCIIYTPSN-E-HFGIVPIEAMF 305 (390)
Q Consensus 231 ~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~---adv~v~ps~~-e-~~~~~~~Ea~a 305 (390)
.++.|+.+.+ .....+....++.|. .|. ...+..+....+.. .|++++-... + .-|..+++.+.
T Consensus 6 ~~ilivdd~~-------~~~~~l~~~L~~~g~--~v~--~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~ 74 (140)
T 3h5i_A 6 KKILIVEDSK-------FQAKTIANILNKYGY--TVE--IALTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQ 74 (140)
T ss_dssp CEEEEECSCH-------HHHHHHHHHHHHTTC--EEE--EESSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHH
T ss_pred cEEEEEeCCH-------HHHHHHHHHHHHcCC--EEE--EecChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHH
Confidence 5677777543 334667777777653 233 33455555666643 5777775443 3 34455555443
Q ss_pred --cCCCEEEe-cCC---CcccceecCcceeeecC-CHHHHHHHHHHHhc
Q psy12587 306 --CKRPVIAV-NSG---GPKESVVDGRTGFLCES-NEEAFAKAMKKIVD 347 (390)
Q Consensus 306 --~G~pvi~~-~~~---~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~ 347 (390)
-.+|+|.- ... ...+.+..|..+++..+ +.+++..+|..++.
T Consensus 75 ~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~ 123 (140)
T 3h5i_A 75 QISELPVVFLTAHTEPAVVEKIRSVTAYGYVMKSATEQVLITIVEMALR 123 (140)
T ss_dssp HHCCCCEEEEESSSSCCCCGGGGGSCEEEEEETTCCHHHHHHHHHHHHH
T ss_pred hCCCCCEEEEECCCCHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 47888773 322 23345556778899999 99999999998875
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 390 | ||||
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 2e-17 | |
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 1e-15 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-14 | |
| d2f9fa1 | 166 | c.87.1.8 (A:2-167) First mannosyl transferase WbaZ | 4e-07 | |
| d2iw1a1 | 370 | c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt | 6e-07 |
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 81.4 bits (199), Expect = 2e-17
Identities = 57/345 (16%), Positives = 121/345 (35%), Gaps = 24/345 (6%)
Query: 56 ALCMYLRMIVIALYVAWYSEKPDLVFCD---LVSICIPILQAKQFKVLFYCHYPDQL--- 109
A+ +++ + PD+V V I + + +F H ++
Sbjct: 100 AVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKLP 159
Query: 110 -LSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQATFRSLDHKCLDILYPS 168
+ L + +P E AD + S FR+ + K +
Sbjct: 160 AFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGI 219
Query: 169 VYTE----GLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLS 224
+ L + E +++L+ E + F+ I R++R + + L ++ S
Sbjct: 220 DCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVL--LKAIEILSS 277
Query: 225 DEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFC 284
+ ++ ++ G DP +E K + + S L+
Sbjct: 278 KKEFQEMRFIIIGKGDPELEGWARSLEE--------KHGNVKVITEMLSREFVRELYGSV 329
Query: 285 HCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMK 343
+I E FG+V +EAM IA GG ++ ++ TG L ++ + A A+
Sbjct: 330 DFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRD-IITNETGILVKAGDPGELANAIL 388
Query: 344 KIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLDKK 388
K ++ + + +F + R FS++ + + +D+
Sbjct: 389 KALELSRSDLSKFRENCKKR-AMSFSWEKSAERYVKAYTGSIDRA 432
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 75.5 bits (184), Expect = 1e-15
Identities = 28/208 (13%), Positives = 68/208 (32%), Gaps = 26/208 (12%)
Query: 188 PLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENV 247
+ +F I+R +K ++L +++ + S +LVV G D +
Sbjct: 285 RIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSL-------GGRLVVLGAGDVALEGAL 337
Query: 248 EYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCK 307
+ V ++ + C II E G+ + A+
Sbjct: 338 LAAAS--------RHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYG 389
Query: 308 RPVIAVNSGGPKESVVDGR---------TGFLCES-NEEAFAKAMKKIVDNDGNIIQQFS 357
+ +GG ++V+D TG + +A+++ V + + ++
Sbjct: 390 CIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHD-PKLWT 448
Query: 358 QFGFNRFNEKFSFQAFSIQLNTIVNNML 385
Q S++ + + + ++
Sbjct: 449 QMQKLGMKSDVSWEKSAGLYAALYSQLI 476
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 72.6 bits (177), Expect = 1e-14
Identities = 21/201 (10%), Positives = 55/201 (27%), Gaps = 18/201 (8%)
Query: 164 ILYPSVYTEGLEKTTPEPIENVLNPLPG--KEDIVFLSINRYERKKNLELAIYSLNSLRS 221
+ + + + K P+ L L K S+ R + K L + +L
Sbjct: 222 VYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLE 281
Query: 222 RLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLK-------LSDNVLFLTSPSD 274
+ +A + +L ++ +
Sbjct: 282 KYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDR 341
Query: 275 AAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRP-----VIAVNSGGPKESVVDGRTGF 329
+ +F++ + TP + +V E + + P ++ G +
Sbjct: 342 KLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS---AL 398
Query: 330 LCES-NEEAFAKAMKKIVDND 349
+ + + A A+ + +
Sbjct: 399 IVNPYDRDEVAAALDRALTMS 419
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Length = 166 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 47.5 bits (111), Expect = 4e-07
Identities = 50/159 (31%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 197 FLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVL 256
+LS+NR +K +EL + L+ KL + G + + K
Sbjct: 15 WLSVNRIYPEKRIELQLEVFKKLQ---------DEKLYIVGWFSKGDHAERYARK----- 60
Query: 257 VKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSG 316
DNV FL S S+ I L+ C ++ T +E FG+ PIEAM +PVIAVN G
Sbjct: 61 -IMKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEG 119
Query: 317 GPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQ 355
G KE+V++ +TG+L ++ AMKK+ N +
Sbjct: 120 GFKETVINEKTGYLVNADVNEIIDAMKKVSKNPDKFKKD 158
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Score = 48.8 bits (114), Expect = 6e-07
Identities = 14/104 (13%), Positives = 37/104 (35%), Gaps = 4/104 (3%)
Query: 281 FKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES--NEEAF 338
+++ E GIV +EA+ PV+ G + D G + ++E
Sbjct: 267 MAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQL 326
Query: 339 AKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVN 382
+ ++K + + +++ + + + + I+
Sbjct: 327 NEVLRKALTQS-PLRMAWAENARHYA-DTQDLYSLPEKAADIIT 368
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 390 | |||
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.97 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.96 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.95 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.53 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 99.33 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 99.33 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 99.22 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 99.21 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 99.18 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 99.06 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 98.81 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 98.65 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 98.59 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 98.57 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 98.44 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 98.32 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 97.42 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 97.34 | |
| d2nzwa1 | 349 | Alpha1,3-fucosyltransferase FucT {Helicobacter pyl | 88.09 | |
| d1ybha1 | 179 | Acetohydroxyacid synthase catalytic subunit {Thale | 85.58 | |
| d2ez9a1 | 183 | Pyruvate oxidase {Lactobacillus plantarum [TaxId: | 82.12 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=1.7e-43 Score=326.63 Aligned_cols=292 Identities=13% Similarity=0.146 Sum_probs=218.9
Q ss_pred cCCCEEEEcccccchhHH--Hhhc---ccEEEEeecCCccccchhhhhhhhcc------------cchhhHHHHHhcCcc
Q psy12587 75 EKPDLVFCDLVSICIPIL--QAKQ---FKVLFYCHYPDQLLSKQGSFLKSIYR------------FPLNKLEEWTTCKAD 137 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~--~~~~---~~~v~~~h~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~ad 137 (390)
.+|||||+|++...+... +..+ +|+|+++|+................. .-....++.....+|
T Consensus 129 ~~pDIvH~h~~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 208 (477)
T d1rzua_ 129 WRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTAT 208 (477)
T ss_dssp CCCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCS
T ss_pred CCCCEEEecchhHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcchhhcccccccccchhHHHHHHHHhhh
Confidence 689999999865544332 2222 89999999764432222111111100 001134455677899
Q ss_pred eEEEccHhHHHHHHHHhcc--------CCCCceeecCCCCCCCCCCCCCccc-------------------hhhhcCCCC
Q psy12587 138 KIVVNSEFTKSVVQATFRS--------LDHKCLDILYPSVYTEGLEKTTPEP-------------------IENVLNPLP 190 (390)
Q Consensus 138 ~ii~~s~~~~~~~~~~~~~--------~~~~~~~vi~~~~~~~~~~~~~~~~-------------------~~~~~~~l~ 190 (390)
.++++|...++.....+.+ ....++.+|+||+|.+.+.+..... ++...+ ++
T Consensus 209 ~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~ 287 (477)
T d1rzua_ 209 ALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFR-ID 287 (477)
T ss_dssp EEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHT-CC
T ss_pred hhhhccHHHHHHHHHHhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhcc-cc
Confidence 9999999877755432111 1245899999999998876532211 112222 34
Q ss_pred CCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEec
Q psy12587 191 GKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLT 270 (390)
Q Consensus 191 ~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g 270 (390)
.++.++|+++||+.+.||++.+++|+.++.+. +.+++++|.|+.. +..++++....+ .+++.+.+
T Consensus 288 ~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~-------~~~l~~~G~G~~~------~~~~~~~~~~~~--~~~v~~~~ 352 (477)
T d1rzua_ 288 DDGSPLFCVISRLTWQKGIDLMAEAVDEIVSL-------GGRLVVLGAGDVA------LEGALLAAASRH--HGRVGVAI 352 (477)
T ss_dssp CSSSCEEEEESCBSTTTTHHHHHTTHHHHHHT-------TCEEEEEECBCHH------HHHHHHHHHHHT--TTTEEEEE
T ss_pred cCCccEEEEEeeeeecCCcHHHHHHHHHHHhh-------CCeEEEEecCCch------HHHHHHHHHhhc--CCeEEEEc
Confidence 44668899999999999999999999998776 3788899988642 224444555544 57899999
Q ss_pred CCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceecCc---------ceeeecC-CHHHHHH
Q psy12587 271 SPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGR---------TGFLCES-NEEAFAK 340 (390)
Q Consensus 271 ~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~---------~g~~~~~-~~~~l~~ 340 (390)
..+.++...+|+.||++++||.+|+||++++|||+||+|||+|+.||++|++.++. +|+++++ |+++|++
T Consensus 353 ~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ 432 (477)
T d1rzua_ 353 GYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQ 432 (477)
T ss_dssp SCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHH
T ss_pred ccChhHHHHHHHhCccccCCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHH
Confidence 99999989999999999999999999999999999999999999999999998764 8999999 9999999
Q ss_pred HHHHHhc---CChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhhh
Q psy12587 341 AMKKIVD---NDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNMLD 386 (390)
Q Consensus 341 ~i~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (390)
+|.++++ |++ .+++|++++. .++|||+.+++++.++|++++.
T Consensus 433 ai~~~l~~~~~~~-~~~~~~~~a~---~~~fsw~~~a~~~~~lY~~ll~ 477 (477)
T d1rzua_ 433 AIRRTVRYYHDPK-LWTQMQKLGM---KSDVSWEKSAGLYAALYSQLIS 477 (477)
T ss_dssp HHHHHHHHHTCHH-HHHHHHHHHH---TCCCBHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhhhCCHH-HHHHHHHHHH---HhhCCHHHHHHHHHHHHHHHhC
Confidence 9998775 667 8888887774 4689999999999999999874
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=1.2e-41 Score=311.38 Aligned_cols=296 Identities=17% Similarity=0.200 Sum_probs=226.6
Q ss_pred cCCCEEEEcccccchhHH---HhhcccEEEEeecCCccccchhhh----hhhhcccchhhHHHHHhcCcceEEEccHhHH
Q psy12587 75 EKPDLVFCDLVSICIPIL---QAKQFKVLFYCHYPDQLLSKQGSF----LKSIYRFPLNKLEEWTTCKADKIVVNSEFTK 147 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~~---~~~~~~~v~~~h~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~ 147 (390)
..||+||+|++...+... +..++|+|+++|+..........+ ............++.....+|.+++.+....
T Consensus 119 ~~pDiIh~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~ 198 (437)
T d2bisa1 119 PLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYL 198 (437)
T ss_dssp CCCSEEEEETGGGHHHHHHHHHHHCCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCHHHH
T ss_pred CCCCEEEECChhhhhHhhhhhccccCceeEEEeeccccccchhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccchhhh
Confidence 678999999876554333 233489999999865432221111 1112222223455667788999999999888
Q ss_pred HHHHHHhccCCCCceeecCCCCCCCCCCCCCc--------cchhhhcCCCCCCCCeEEEEeeccc-ccCCHHHHHHHHHH
Q psy12587 148 SVVQATFRSLDHKCLDILYPSVYTEGLEKTTP--------EPIENVLNPLPGKEDIVFLSINRYE-RKKNLELAIYSLNS 218 (390)
Q Consensus 148 ~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~i~~~g~~~-~~K~~~~ll~a~~~ 218 (390)
......++.. ..++.++|||+|.+.+.+... ......+ ...++++++++|++. +.||++.+++|+..
T Consensus 199 ~~~~~~~~~~-~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~G~~~~~~Kg~~~ll~a~~~ 274 (437)
T d2bisa1 199 IDEWGFFRNF-EGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKF---GMDEGVTFMFIGRFDRGQKGVDVLLKAIEI 274 (437)
T ss_dssp HHTHHHHGGG-TTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHT---TCCSCEEEEEESCBCSSSSCHHHHHHHHHH
T ss_pred hhhhhhhccc-cCceEEEecccccccccccccchhhHHHHHhhhhhh---hccCCceEEEeecccccchhHHHHHhhhcc
Confidence 7776666544 678999999999987765321 1223333 223678899999996 57999999999998
Q ss_pred HHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCc
Q psy12587 219 LRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGI 298 (390)
Q Consensus 219 l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~ 298 (390)
+..+... .+++|+++|.++.. +...++.+.+.. .+.+.+.|.++.+++..+++.||++++||..|++|+
T Consensus 275 ~~~~~~~---~~~~lvi~G~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~ 343 (437)
T d2bisa1 275 LSSKKEF---QEMRFIIIGKGDPE------LEGWARSLEEKH--GNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGL 343 (437)
T ss_dssp HTTSGGG---GGEEEEEECCBCHH------HHHHHHHHHHTC--TTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCH
T ss_pred ccccccc---ccceeeeecccccc------cccchhhhcccc--ccceeccccCcHHHHHHHHhhhccccccccccccch
Confidence 8554311 24999999988642 223333343333 467788899999999999999999999999999999
Q ss_pred cHHhhhhcCCCEEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhc-CChhHHHHHHHHHHHHHhhhcCHHHHHHH
Q psy12587 299 VPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVD-NDGNIIQQFSQFGFNRFNEKFSFQAFSIQ 376 (390)
Q Consensus 299 ~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (390)
+++|||+||+|||+++.|+..|++++ .+|+++++ |+++++++|.++++ +++ .++++++++++.+ ++|||++++++
T Consensus 344 ~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~~~~d~~~la~~i~~ll~~~~~-~~~~~~~~~~~~~-~~~s~~~~a~~ 420 (437)
T d2bisa1 344 VALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALELSRS-DLSKFRENCKKRA-MSFSWEKSAER 420 (437)
T ss_dssp HHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEECTTCHHHHHHHHHHHHTTTTS-CTHHHHHHHHHHH-HHSCHHHHHHH
T ss_pred HHHHHHHCCCCEEEeCCCCcHHhEEC-CcEEEECCCCHHHHHHHHHHHHhCCHH-HHHHHHHHHHHHH-HhCCHHHHHHH
Confidence 99999999999999999999999876 58999998 99999999999987 556 8999999999987 67999999999
Q ss_pred HHHHHHhhhhhc
Q psy12587 377 LNTIVNNMLDKK 388 (390)
Q Consensus 377 ~~~~~~~~~~~~ 388 (390)
++++|++++++.
T Consensus 421 ~~~iY~~~i~r~ 432 (437)
T d2bisa1 421 YVKAYTGSIDRA 432 (437)
T ss_dssp HHHHHHTCSCCB
T ss_pred HHHHHHHHHHhH
Confidence 999999998764
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.6e-41 Score=299.31 Aligned_cols=343 Identities=15% Similarity=0.190 Sum_probs=241.5
Q ss_pred CCcchhhhHhh-HhhhhcCCceeecCCccccccCCCcceEEeccccccccchhhHHHHHHHHHHHHHHHHHHhh-cCCCE
Q psy12587 2 LGATARLTITA-TAWGATGPRTTAHDHCFKETKDGTLPVKVIGDWLPRNIFGKFYALCMYLRMIVIALYVAWYS-EKPDL 79 (390)
Q Consensus 2 ~GG~~~~~~~l-~~L~~~G~~V~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dv 79 (390)
.||+++++.+| ++|+++||+|+++..........++.+..++.. ..........+.... ...++ .++|+
T Consensus 12 ~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-----~~~~~~~~~d~ 82 (370)
T d2iw1a1 12 FGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVK----SHTNHGRNAEYYAWV-----QNHLKEHPADR 82 (370)
T ss_dssp TCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCCTTCEEEECCCC----CSSHHHHHHHHHHHH-----HHHHHHSCCSE
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEEEecCCCCCCCCceEEEEcCcc----ccccchhhHHHHHHH-----HHHHHhcccce
Confidence 59999999999 999999999999833222223334555544321 111111111111111 12344 89999
Q ss_pred EEEcccccchhHHHhhcccEEEEeecCCcc--ccchhhhhhhhcc--cchhhHHHH--HhcCcceEEEccHhHHHHHHHH
Q psy12587 80 VFCDLVSICIPILQAKQFKVLFYCHYPDQL--LSKQGSFLKSIYR--FPLNKLEEW--TTCKADKIVVNSEFTKSVVQAT 153 (390)
Q Consensus 80 i~~~~~~~~~~~~~~~~~~~v~~~h~~~~~--~~~~~~~~~~~~~--~~~~~~~~~--~~~~ad~ii~~s~~~~~~~~~~ 153 (390)
|+.+.....+.. +..+..... ............. .......+. ....++.+++.++...+.+.+.
T Consensus 83 v~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (370)
T d2iw1a1 83 VVGFNKMPGLDV---------YFAADVCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKH 153 (370)
T ss_dssp EEESSCCTTCSE---------EECCSCCHHHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHH
T ss_pred eeecccCchHHH---------HHHhhcccceeeeeecCccccccchhchhHHHHHHHHhhccCceEEEecHHHHHHHHHh
Confidence 998875432211 111110000 0000000000000 001111222 2345788999999988888877
Q ss_pred hccCCCCceeecCCCCCCCCCCCCC----ccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhccccccc
Q psy12587 154 FRSLDHKCLDILYPSVYTEGLEKTT----PEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKT 229 (390)
Q Consensus 154 ~~~~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~ 229 (390)
++ .+.+++.++|||++.+.+.+.. ....+..++ ++ .+.++++++|++.+.||++.+++|++.+.++.++
T Consensus 154 ~~-~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~-~~-~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~---- 226 (370)
T d2iw1a1 154 YQ-TEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNG-IK-EQQNLLLQVGSDFGRKGVDRSIEALASLPESLRH---- 226 (370)
T ss_dssp HC-CCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTT-CC-TTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHH----
T ss_pred cC-CCcceEEEEEeecccccccccCchhhhhhhhhccC-CC-ccceEEEEEeccccccchhhhccccccccccccc----
Confidence 65 3377899999999987554322 233444444 23 4788999999999999999999999999888775
Q ss_pred ceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCC
Q psy12587 230 HVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRP 309 (390)
Q Consensus 230 ~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~p 309 (390)
..+.++|+++.. +++++++++++..+++.++|+.+ ++.++|+.||++++||..|+||++++|||+||+|
T Consensus 227 -~~~~ii~g~~~~--------~~~~~~~~~~~~~~~v~~~g~~~--~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G~P 295 (370)
T d2iw1a1 227 -NTLLFVVGQDKP--------RKFEALAEKLGVRSNVHFFSGRN--DVSELMAAADLLLHPAYQEAAGIVLLEAITAGLP 295 (370)
T ss_dssp -TEEEEEESSSCC--------HHHHHHHHHHTCGGGEEEESCCS--CHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCC
T ss_pred -ceeeeccccccc--------ccccccccccccccccccccccc--ccccccccccccccccccccccceeeecccCCee
Confidence 667666666555 78899999999999999999875 4689999999999999999999999999999999
Q ss_pred EEEecCCCcccceecCcceeee-cC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q psy12587 310 VIAVNSGGPKESVVDGRTGFLC-ES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVN 382 (390)
Q Consensus 310 vi~~~~~~~~e~i~~~~~g~~~-~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
||+|+.++.+|++.++.+|+++ ++ |+++++++|.++++|++ .+++|+++|++.+ +.|++..+.+++.++|+
T Consensus 296 vI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d~~-~~~~~~~~ar~~~-~~~~~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 296 VLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSP-LRMAWAENARHYA-DTQDLYSLPEKAADIIT 368 (370)
T ss_dssp EEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHH-HHHHHHHHHHHHH-HHSCCSCHHHHHHHHHH
T ss_pred EEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHH-HHhChhHHHHHHHHHHh
Confidence 9999999999999999999766 56 99999999999999999 9999999999998 56776666677777664
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=8.9e-28 Score=217.19 Aligned_cols=298 Identities=10% Similarity=0.148 Sum_probs=220.3
Q ss_pred HHhh--cCCCEEEEcccccchhHHHhhc----ccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccH
Q psy12587 71 AWYS--EKPDLVFCDLVSICIPILQAKQ----FKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSE 144 (390)
Q Consensus 71 ~~~~--~~~Dvi~~~~~~~~~~~~~~~~----~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~ 144 (390)
.+.+ ..-|+|++|++...+....+.. .++++++|.+.+.... ++.. .........+-.+|.|.+.+.
T Consensus 115 ~l~~~~~~~d~iwvhDyhl~llp~~lR~~~~~~~i~~flH~pfP~~~~----fr~l---p~~~~il~~ll~~d~igf~~~ 187 (456)
T d1uqta_ 115 KLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEI----FNAL---PTYDTLLEQLCDYDLLGFQTE 187 (456)
T ss_dssp HHGGGCCTTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCHHH----HTTS---TTHHHHHHHHTTSSEEEESSH
T ss_pred HHHHhccCCCeEEEeccchhhhHHHHHHhCCCCcEEEEeCCCCCChHH----hccC---cchHHHHHHhhccccccccCH
Confidence 4445 4559999999766554333322 7889999976542111 1100 011111223457899999998
Q ss_pred hHHHHHHHHhccC---------------CCCceeecCCCCCCCCCCCCC----c---cchhhhcCCCCCCCCeEEEEeec
Q psy12587 145 FTKSVVQATFRSL---------------DHKCLDILYPSVYTEGLEKTT----P---EPIENVLNPLPGKEDIVFLSINR 202 (390)
Q Consensus 145 ~~~~~~~~~~~~~---------------~~~~~~vi~~~~~~~~~~~~~----~---~~~~~~~~~l~~~~~~~i~~~g~ 202 (390)
..+..+.+..... ...++.++|+|+|++.+.... . ..++... .++++|+++||
T Consensus 188 ~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~il~V~R 262 (456)
T d1uqta_ 188 NDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAEL-----KNVQNIFSVER 262 (456)
T ss_dssp HHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHT-----TTCEEEEEECC
T ss_pred HHHHHHHHHHHHHhCcccccCCeEEecCceeeeeeecCcccchhhhhhcccHHHHHHHHHHHhc-----CCCeEEEEeCC
Confidence 8877766431110 023678899999987664321 1 1112222 37789999999
Q ss_pred ccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCc-chhHHHHHHHHHHHH-------cCCCCcEEEecCCCh
Q psy12587 203 YERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNI-ENVEYYKELGVLVKK-------LKLSDNVLFLTSPSD 274 (390)
Q Consensus 203 ~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~-~~~~y~~~~~~~~~~-------~~l~~~v~~~g~~~~ 274 (390)
+.+.||++.+++|+.++.+++|+ ...++.++++|.+..... +...+..++.+++.+ .+..+.+.+.+.++.
T Consensus 263 ld~~KGi~~~l~A~~~~l~~~p~-~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~ 341 (456)
T d1uqta_ 263 LDYSKGLPERFLAYEALLEKYPQ-HHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDR 341 (456)
T ss_dssp BCGGGCHHHHHHHHHHHHHHCGG-GTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCH
T ss_pred CchhhchHHHHHHHHHHHHhCcc-ccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCH
Confidence 99999999999999999998885 233577888876654322 223444555554443 356788899999999
Q ss_pred HHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCC-----EEEecCCCcccceecCcceeeecC-CHHHHHHHHHHHhcC
Q psy12587 275 AAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRP-----VIAVNSGGPKESVVDGRTGFLCES-NEEAFAKAMKKIVDN 348 (390)
Q Consensus 275 ~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~p-----vi~~~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~ 348 (390)
.++..+|+.||++++||..||||++++|||+||+| +|+|+.+|..+.+. .|+++++ |++++|++|.+++++
T Consensus 342 ~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~---~g~lVnP~d~~~~A~ai~~aL~~ 418 (456)
T d1uqta_ 342 KLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYDRDEVAAALDRALTM 418 (456)
T ss_dssp HHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEECTTCHHHHHHHHHHHHTC
T ss_pred HHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHHHhC---CeEEECcCCHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999 89999999999984 3799999 999999999999998
Q ss_pred ChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhh
Q psy12587 349 DGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNML 385 (390)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
+.++++++.+++++.+ .+|++..+++.+++-++++.
T Consensus 419 ~~~er~~~~~~~~~~v-~~~~~~~W~~~fl~~l~~~~ 454 (456)
T d1uqta_ 419 SLAERISRHAEMLDVI-VKNDINHWQECFISDLKQIV 454 (456)
T ss_dssp CHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHhhc
Confidence 8768888999999998 67999999999999888764
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.96 E-value=5.3e-28 Score=194.90 Aligned_cols=186 Identities=20% Similarity=0.292 Sum_probs=148.1
Q ss_pred CCCCCCCCCCC--------ccchhhhcCCCCCCCCeEEEEeeccc-ccCCHHHHHHHHHHHHhhcccccccceEEEEEcC
Q psy12587 168 SVYTEGLEKTT--------PEPIENVLNPLPGKEDIVFLSINRYE-RKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGG 238 (390)
Q Consensus 168 ~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~i~~~g~~~-~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~ 238 (390)
|||.+.|.+.. ...++++++ + ++..+|+|+||+. ++||++.++++++.+.++... .+++|+++|.
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~-l--~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~---~~~~l~i~G~ 74 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFG-M--DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF---QEMRFIIIGK 74 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTT-C--CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG---GGEEEEEECC
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhC-C--CCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCC---CCeEEEEEee
Confidence 67777776431 123344554 2 3677889999996 689999999999999654321 2599999998
Q ss_pred CCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCc
Q psy12587 239 YDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGP 318 (390)
Q Consensus 239 ~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~ 318 (390)
++. .+....+.+.+.+ ...+.+.|.++.+++..+|+.||++++||..|++|.+++|||+||+|||+++.++.
T Consensus 75 g~~------~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~~~ 146 (196)
T d2bfwa1 75 GDP------ELEGWARSLEEKH--GNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGL 146 (196)
T ss_dssp BCH------HHHHHHHHHHHHC--TTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHH
T ss_pred ccc------chhhhhhhhhhcc--ceeEEeeeccccccchhccccccccccccccccccccchhhhhcCceeeecCCCcc
Confidence 753 2223344444443 46677889999999999999999999999999999999999999999999999999
Q ss_pred ccceecCcceeeecC-CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcC
Q psy12587 319 KESVVDGRTGFLCES-NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFS 369 (390)
Q Consensus 319 ~e~i~~~~~g~~~~~-~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ 369 (390)
.|++.+ .+|+++++ |+++++++|.++++...+.+.+++++|++.+ ++||
T Consensus 147 ~e~i~~-~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a-~~fs 196 (196)
T d2bfwa1 147 RDIITN-ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRA-MSFS 196 (196)
T ss_dssp HHHCCT-TTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HHTC
T ss_pred ceeecC-CceeeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH-HhCC
Confidence 998865 58999999 9999999999998844438999999999998 5675
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.95 E-value=1.2e-27 Score=187.29 Aligned_cols=152 Identities=34% Similarity=0.547 Sum_probs=127.4
Q ss_pred CCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCC
Q psy12587 193 EDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSP 272 (390)
Q Consensus 193 ~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~ 272 (390)
+.+ ++|+||+.++||++.+++|++.+++ .+++++|.+... .+.+.+.+.+.+.. .++|+|+|++
T Consensus 12 ~~~-~l~iGrl~~~K~~~~~i~a~~~l~~---------~~l~ivg~~~~~-----~~~~~~~~~~~~~~-~~~v~~~g~~ 75 (166)
T d2f9fa1 12 GDF-WLSVNRIYPEKRIELQLEVFKKLQD---------EKLYIVGWFSKG-----DHAERYARKIMKIA-PDNVKFLGSV 75 (166)
T ss_dssp CSC-EEEECCSSGGGTHHHHHHHHHHCTT---------SCEEEEBCCCTT-----STHHHHHHHHHHHS-CTTEEEEESC
T ss_pred CCE-EEEEecCccccCHHHHHHHHHHhcC---------CeEEEEEecccc-----cchhhhhhhhcccc-cCcEEEeecc
Confidence 455 6799999999999999999988743 678899987654 12244444444443 4789999999
Q ss_pred ChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhH
Q psy12587 273 SDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNI 352 (390)
Q Consensus 273 ~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~ 352 (390)
+++++.++|+.||++++||..|++|++++|||++|+|||+++.++..|++.++.+|++++.|+++++++|.++++++++.
T Consensus 76 ~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~d~~~~~~~i~~l~~~~~~~ 155 (166)
T d2f9fa1 76 SEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNADVNEIIDAMKKVSKNPDKF 155 (166)
T ss_dssp CHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECSCHHHHHHHHHHHHHCTTTT
T ss_pred cccccccccccccccccccccccccccccccccccccceeecCCcceeeecCCcccccCCCCHHHHHHHHHHHHhCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987669999999999999998734
Q ss_pred HHHHHHHH
Q psy12587 353 IQQFSQFG 360 (390)
Q Consensus 353 ~~~~~~~~ 360 (390)
++.+.++|
T Consensus 156 ~~~~~~~a 163 (166)
T d2f9fa1 156 KKDCFRRA 163 (166)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444444
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.53 E-value=1.6e-12 Score=113.24 Aligned_cols=316 Identities=10% Similarity=-0.024 Sum_probs=163.5
Q ss_pred CcchhhhHhh-HhhhhcCCceeec--CCc--cccccCCCcceEEecccc-ccc-cchhhHHHHHHHHHHHHHHHHHHhh-
Q psy12587 3 GATARLTITA-TAWGATGPRTTAH--DHC--FKETKDGTLPVKVIGDWL-PRN-IFGKFYALCMYLRMIVIALYVAWYS- 74 (390)
Q Consensus 3 GG~~~~~~~l-~~L~~~G~~V~~~--~~~--~~~~~~~~~~i~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~- 74 (390)
||.-..+..+ ++|.++||+|+++ ... ..-....++.+..++... ... ..............+ ... ..+++
T Consensus 11 GGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~i~~~ 88 (351)
T d1f0ka_ 11 GGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAW-RQA-RAIMKA 88 (351)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHHHH-HHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEEeCCcchhhcccccCCcEEEEECCCcCCCCHHHHHHHHHHHHHhH-HHH-HHHhhc
Confidence 4566668889 9999999999876 111 112223445555543211 111 111111111111111 111 13455
Q ss_pred cCCCEEEEcccccchhH---HHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHHH
Q psy12587 75 EKPDLVFCDLVSICIPI---LQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVVQ 151 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~~---~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 151 (390)
.+||+++.......... ....++|++.+.++.... ...+.....++.+......
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~------ 145 (351)
T d1f0ka_ 89 YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAG-----------------LTNKWLAKIATKVMQAFPG------ 145 (351)
T ss_dssp HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSCC-----------------HHHHHHTTTCSEEEESSTT------
T ss_pred cccceeeecccchhhhhhhhhhhcccceeecccccccc-----------------hhHHHhhhhcceeeccccc------
Confidence 99999998764433333 333448888766543211 1112223345555433211
Q ss_pred HHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEE-eecccccCCHHHHHHHHHHHHhhcccccccc
Q psy12587 152 ATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLS-INRYERKKNLELAIYSLNSLRSRLSDEMKTH 230 (390)
Q Consensus 152 ~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~-~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~ 230 (390)
. ......+.++........... . .... ...++..++. .|......-.+.+.+.+..+...
T Consensus 146 -----~-~~~~~~~~~~~~~~~~~~~~~-~-~~~~---~~~~~~~i~~~~gs~g~~~~~~~~~~~~~~l~~~-------- 206 (351)
T d1f0ka_ 146 -----A-FPNAEVVGNPVRTDVLALPLP-Q-QRLA---GREGPVRVLVVGGSQGARILNQTMPQVAAKLGDS-------- 206 (351)
T ss_dssp -----S-SSSCEECCCCCCHHHHTSCCH-H-HHHT---TCCSSEEEEEECTTTCCHHHHHHHHHHHHHHGGG--------
T ss_pred -----c-ccceeEEcCCcccccccchhH-H-hhhh---cccCCcccccccccchhhhhHHHHHHhhhhhccc--------
Confidence 1 123344444443322222111 1 1111 2224444444 44433222233444455554332
Q ss_pred eEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCE
Q psy12587 231 VKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPV 310 (390)
Q Consensus 231 ~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pv 310 (390)
...++.+..... ......... ....++...++.++. .++|+.||++|.-+ .+.++.|++++|+|+
T Consensus 207 ~~~i~~~~~~~~-------~~~~~~~~~--~~~~~~~v~~f~~~~--~~lm~~adl~It~~----G~~T~~Eal~~g~P~ 271 (351)
T d1f0ka_ 207 VTIWHQSGKGSQ-------QSVEQAYAE--AGQPQHKVTEFIDDM--AAAYAWADVVVCRS----GALTVSEIAAAGLPA 271 (351)
T ss_dssp EEEEEECCTTCH-------HHHHHHHHH--TTCTTSEEESCCSCH--HHHHHHCSEEEECC----CHHHHHHHHHHTCCE
T ss_pred ceeeeeccccch-------hhhhhhhcc--cccccceeeeehhhH--HHHHHhCchhhccc----cchHHHHHHHhCCce
Confidence 344444444321 122222222 234678888888765 68999999999633 347899999999999
Q ss_pred EEecCCC-------cccceecCcceeeecC---CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHH
Q psy12587 311 IAVNSGG-------PKESVVDGRTGFLCES---NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTI 380 (390)
Q Consensus 311 i~~~~~~-------~~e~i~~~~~g~~~~~---~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
|+.+... ..+.+.+.+.|..++. +.+.+.++|..+ +++ .+.+|++++++.. ....++.+++.+.++
T Consensus 272 I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e~l~~~l~~l--~~~-~~~~~~~~~~~~~-~~~~a~~i~~~i~~l 347 (351)
T d1f0ka_ 272 LFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--SRE-TLLTMAERARAAS-IPDATERVANEVSRV 347 (351)
T ss_dssp EECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--CHH-HHHHHHHHHHHTC-CTTHHHHHHHHHHHH
T ss_pred eeeecccCCchHHHHHHHHHHCCCEEEechhhCCHHHHHHHHHhh--CHH-HHHHHHHHHHccC-CccHHHHHHHHHHHH
Confidence 9865431 1334555667777754 678888888776 455 7788998888764 444455555555554
Q ss_pred H
Q psy12587 381 V 381 (390)
Q Consensus 381 ~ 381 (390)
.
T Consensus 348 ~ 348 (351)
T d1f0ka_ 348 A 348 (351)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.33 E-value=2.2e-11 Score=107.51 Aligned_cols=80 Identities=14% Similarity=0.102 Sum_probs=63.2
Q ss_pred CCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCC--------cccceecCcceeeecC
Q psy12587 262 LSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGG--------PKESVVDGRTGFLCES 333 (390)
Q Consensus 262 l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~--------~~e~i~~~~~g~~~~~ 333 (390)
.++++.+.++++.. .++..+|++|..+ ...++.|||++|+|+|+.+..+ ..+.+.+.+.|..++.
T Consensus 268 ~~~~v~i~~~~p~~---~ll~~a~~~v~hg----G~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~ 340 (391)
T d1pn3a_ 268 DGADCFVVGEVNLQ---ELFGRVAAAIHHD----SAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDG 340 (391)
T ss_dssp CCTTCCEESSCCHH---HHHTTSSCEEEES----CHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECC
T ss_pred CCCCEEEecccCHH---HHHhhccEEEecC----chHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEcCc
Confidence 36889999999866 5789999999754 3468999999999999987543 2344555567887755
Q ss_pred ---CHHHHHHHHHHHhcC
Q psy12587 334 ---NEEAFAKAMKKIVDN 348 (390)
Q Consensus 334 ---~~~~l~~~i~~l~~~ 348 (390)
++++++++|.+++++
T Consensus 341 ~~~~~~~l~~~i~~~l~~ 358 (391)
T d1pn3a_ 341 PVPTIDSLSAALDTALAP 358 (391)
T ss_dssp SSCCHHHHHHHHHHHTST
T ss_pred CCCCHHHHHHHHHHHhCH
Confidence 689999999999954
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=99.33 E-value=3.9e-11 Score=104.53 Aligned_cols=271 Identities=12% Similarity=0.035 Sum_probs=168.3
Q ss_pred cCCCEEEEcccccchh----HHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHHH
Q psy12587 75 EKPDLVFCDLVSICIP----ILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSVV 150 (390)
Q Consensus 75 ~~~Dvi~~~~~~~~~~----~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 150 (390)
.+||+|++++-..... ++...++|++ ++|+...-.....+.... .....+-+.|+..++.++..++.+
T Consensus 87 ~kPD~vlv~GDr~e~la~a~aa~~~~ipi~-HiegG~rsg~~~~~~~de-------~~R~~iskls~~hf~~t~~~~~~L 158 (373)
T d1v4va_ 87 MGADYVLVHGDTLTTFAVAWAAFLEGIPVG-HVEAGLRSGNLKEPFPEE-------ANRRLTDVLTDLDFAPTPLAKANL 158 (373)
T ss_dssp TTCSEEEEESSCHHHHHHHHHHHHTTCCEE-EETCCCCCSCTTSSTTHH-------HHHHHHHHHCSEEEESSHHHHHHH
T ss_pred cCcccccccccCccchhHHHHHHHhhhhhe-eecccccccccccCcchh-------hhhhhhccccceeeecchhhhhhh
Confidence 9999999988433222 2333448865 555422211110111111 122334456899999999999999
Q ss_pred HHHhccCCCCceeecCCCCCCCCCCCCCccchhhhcCCCCCCCCeEEEEeecccccCCHHHHHHHHHHHHhhcccccccc
Q psy12587 151 QATFRSLDHKCLDILYPSVYTEGLEKTTPEPIENVLNPLPGKEDIVFLSINRYERKKNLELAIYSLNSLRSRLSDEMKTH 230 (390)
Q Consensus 151 ~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~~~~ 230 (390)
.+. +.++.++.++.++.-.. +..... ..+... ....+++.+++..+....+....+++++..+.+...+
T Consensus 159 ~~~--Ge~~~~I~~vG~p~~D~-i~~~~~-~~~~~~--~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~----- 227 (373)
T d1v4va_ 159 LKE--GKREEGILVTGQTGVDA-VLLAAK-LGRLPE--GLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPH----- 227 (373)
T ss_dssp HTT--TCCGGGEEECCCHHHHH-HHHHHH-HCCCCT--TCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTT-----
T ss_pred hhh--cccccceeecccchhhH-HHhhhh-hccccc--ccccccceeEEeccccccchHHHHHHHHHHHhhhccc-----
Confidence 986 55567899988863111 100000 000000 1223677888888877777788888888888877664
Q ss_pred eEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCE
Q psy12587 231 VKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPV 310 (390)
Q Consensus 231 ~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pv 310 (390)
+.+++...... ....... +.....+++.++..+++.++..+++.|++++--| |..+.||.++|+|+
T Consensus 228 ~~~i~p~~~~~------~~~~~~~---~~~~~~~n~~~~~~l~~~~~l~ll~~s~~vignS-----ssgi~Ea~~lg~P~ 293 (373)
T d1v4va_ 228 LTFVYPVHLNP------VVREAVF---PVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDS-----GGLQEEGAALGVPV 293 (373)
T ss_dssp SEEEEECCSCH------HHHHHHH---HHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESC-----HHHHHHHHHTTCCE
T ss_pred ceeeeeecccc------cchhhhh---hhhcccccceeeccchHHHHHHHhhhceeEeccc-----chhhhcchhhcCcE
Confidence 66655443221 1112222 2233347899999999999999999999999655 56788999999999
Q ss_pred EEe-cCCCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHhhh
Q psy12587 311 IAV-NSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLNTIVNNML 385 (390)
Q Consensus 311 i~~-~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
|.- +.+.-.+-++.+.+ .++..|.+++.+++..+++++. .+.++.. ...-|.--..++++.+.+.+-+
T Consensus 294 Inir~~~eRqeg~~~g~n-vlv~~d~~~I~~~i~~~l~~~~-~~~~~~~-----~~npYGdG~as~rI~~~L~~~~ 362 (373)
T d1v4va_ 294 VVLRNVTERPEGLKAGIL-KLAGTDPEGVYRVVKGLLENPE-ELSRMRK-----AKNPYGDGKAGLMVARGVAWRL 362 (373)
T ss_dssp EECSSSCSCHHHHHHTSE-EECCSCHHHHHHHHHHHHTCHH-HHHHHHH-----SCCSSCCSCHHHHHHHHHHHHT
T ss_pred EEeCCCccCHHHHhcCee-EEcCCCHHHHHHHHHHHHcCHH-HHhhccc-----CCCCCCCCHHHHHHHHHHHHHh
Confidence 987 44555565555543 4444499999999999999887 6665532 1233433344455555555444
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.22 E-value=1e-10 Score=103.37 Aligned_cols=80 Identities=13% Similarity=0.101 Sum_probs=64.2
Q ss_pred CCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCC----cccceecCcceeeecC---
Q psy12587 261 KLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGG----PKESVVDGRTGFLCES--- 333 (390)
Q Consensus 261 ~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~----~~e~i~~~~~g~~~~~--- 333 (390)
.+++++.+.++++.. .++..+|++|. .|...++.||+++|+|+|+.+..+ ..+.+++.+.|..++.
T Consensus 283 ~~~~~v~~~~~~p~~---~ll~~~~~~I~----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~ 355 (401)
T d1rrva_ 283 DDRDDCFAIDEVNFQ---ALFRRVAAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTP 355 (401)
T ss_dssp CCCTTEEEESSCCHH---HHGGGSSEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCC
T ss_pred cCCCCEEEEeccCcH---HHhhhccEEEe----cCCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEcCcCCC
Confidence 346899999999876 57889999995 345679999999999999987654 3445556667888765
Q ss_pred CHHHHHHHHHHHhc
Q psy12587 334 NEEAFAKAMKKIVD 347 (390)
Q Consensus 334 ~~~~l~~~i~~l~~ 347 (390)
++++++++|.++++
T Consensus 356 ~~~~L~~ai~~vl~ 369 (401)
T d1rrva_ 356 TFESLSAALTTVLA 369 (401)
T ss_dssp CHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHhC
Confidence 68999999999994
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=99.21 E-value=8.2e-10 Score=96.16 Aligned_cols=248 Identities=17% Similarity=0.130 Sum_probs=141.9
Q ss_pred hcCCCEEEEcccccch----hHHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHH
Q psy12587 74 SEKPDLVFCDLVSICI----PILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSV 149 (390)
Q Consensus 74 ~~~~Dvi~~~~~~~~~----~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 149 (390)
+.+||+|++++-.... .++...++|++ ++|+.+.-.....+.... .....+-+.||..++.++..++.
T Consensus 86 ~~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~-HiegG~~s~~~~~~~~de-------~~R~~iskls~~hf~~t~~~~~~ 157 (377)
T d1o6ca_ 86 DIKPDIVLVHGDTTTTFAGSLAAFYHQIAVG-HVEAGLRTGNKYSPFPEE-------LNRQMTGAIADLHFAPTGQAKDN 157 (377)
T ss_dssp HHCCSEEEEETTCHHHHHHHHHHHHTTCEEE-EESCCCCCSCTTTTTTHH-------HHHHHHHHHCSEEEESSHHHHHH
T ss_pred hcccceeEeeecccccchhhhhhhhccceEE-EEecccccccccccCchh-------hhccccccceeEEeecchhhhhh
Confidence 3999999999853322 22333348864 566533221111111111 12233446689999999999999
Q ss_pred HHHHhccCCCCceeecCCC-CCCCC-CCC-CCccchhhhcCCCCCCCCeEEEEeeccccc-CCHHHHHHHHHHHHhhccc
Q psy12587 150 VQATFRSLDHKCLDILYPS-VYTEG-LEK-TTPEPIENVLNPLPGKEDIVFLSINRYERK-KNLELAIYSLNSLRSRLSD 225 (390)
Q Consensus 150 ~~~~~~~~~~~~~~vi~~~-~~~~~-~~~-~~~~~~~~~~~~l~~~~~~~i~~~g~~~~~-K~~~~ll~a~~~l~~~~~~ 225 (390)
+.+. +.++.++.++.++ +|.-. ... ......... ...++++++..-+.... +.....+.++..+.....+
T Consensus 158 L~~~--G~~~~~I~~vG~~~~D~i~~~~~~~~~~~~~~~----~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~ 231 (377)
T d1o6ca_ 158 LLKE--NKKADSIFVTGNTAIDALNTTVRDGYSHPVLDQ----VGEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFED 231 (377)
T ss_dssp HHHT--TCCGGGEEECCCHHHHHHHHHCCSSCCCSTTTT----TTTSEEEEECC----------HHHHHHHHHHHHHCTT
T ss_pred hhhh--ccccceEeeccchhHHHHHHHHHHHHhhhhhhh----ccCCceEEEEeccccccccchHHHHHHHHhhcccccc
Confidence 9986 5556789999986 33211 000 000111111 22355666666665432 3344555666665555443
Q ss_pred ccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhh
Q psy12587 226 EMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMF 305 (390)
Q Consensus 226 ~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a 305 (390)
+.+++.... .. .......+.....+++.+...+++.++..+++.|++++--| |..+.||-.
T Consensus 232 -----~~~i~~~~~-~~--------~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~vIgnS-----ss~i~Ea~~ 292 (377)
T d1o6ca_ 232 -----VQVVYPVHL-NP--------VVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHFILTDS-----GGVQEEAPS 292 (377)
T ss_dssp -----EEEEEC-----C--------HHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSEEEEC-------CHHHHGGG
T ss_pred -----ccccccccc-cc--------ccchhhhhccccccceEeccccchHHHHHHHhhhheeeccc-----chhHHhhhh
Confidence 555443322 21 22222223344467899999999999999999999998544 556889999
Q ss_pred cCCCEEEecC-CCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHH
Q psy12587 306 CKRPVIAVNS-GGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQF 356 (390)
Q Consensus 306 ~G~pvi~~~~-~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~ 356 (390)
+|+|+|.-.. +.-.+.++.+ +..+++.|.+++.+++..+++++. .++.+
T Consensus 293 lg~P~Inir~~tERqe~~~~g-~nilv~~~~~~I~~~i~~~l~~~~-~~~~~ 342 (377)
T d1o6ca_ 293 LGKPVLVLRDTTERPEGVEAG-TLKLAGTDEENIYQLAKQLLTDPD-EYKKM 342 (377)
T ss_dssp GTCCEEEECSCCC---CTTTT-SSEEECSCHHHHHHHHHHHHHCHH-HHHHH
T ss_pred hhceEEEeCCCCcCcchhhcC-eeEECCCCHHHHHHHHHHHHhChH-HHhhh
Confidence 9999998644 3344555444 445565599999999999998877 55544
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.18 E-value=1.6e-09 Score=94.06 Aligned_cols=273 Identities=12% Similarity=0.111 Sum_probs=161.3
Q ss_pred hcCCCEEEEcccccchh----HHHhhcccEEEEeecCCccccchhhhhhhhcccchhhHHHHHhcCcceEEEccHhHHHH
Q psy12587 74 SEKPDLVFCDLVSICIP----ILQAKQFKVLFYCHYPDQLLSKQGSFLKSIYRFPLNKLEEWTTCKADKIVVNSEFTKSV 149 (390)
Q Consensus 74 ~~~~Dvi~~~~~~~~~~----~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 149 (390)
+.+||+|++++-..... ++...++|++ ++|+.+.-......... ......+-+.||..++.++..++.
T Consensus 84 ~~kPD~v~v~GDr~e~la~a~aa~~~~ipi~-HiegG~~s~~~~~~~pd-------e~~R~~iskls~~hf~~~~~~~~~ 155 (376)
T d1f6da_ 84 EFKPDVVLVHGDTTTTLATSLAAFYQRIPVG-HVEAGLRTGDLYSPWPE-------EANRTLTGHLAMYHFSPTETSRQN 155 (376)
T ss_dssp HHCCSEEEEETTCHHHHHHHHHHHTTTCCEE-EESCCCCCSCTTSSTTH-------HHHHHHHHHTCSEEEESSHHHHHH
T ss_pred hccCcceeeeccccchhhHHHHHHhhCceEE-EEecccccccccccCch-------hhhhhhhccceeEEEeccHHHHhH
Confidence 39999999998443222 2233348864 67753321111001111 122233456799999999999999
Q ss_pred HHHHhccCCCCceeecCCC-CCCC-----CCCCCCc--cchhhhcCCCCCCCCeEEEEeeccc-ccCCHHHHHHHHHHHH
Q psy12587 150 VQATFRSLDHKCLDILYPS-VYTE-----GLEKTTP--EPIENVLNPLPGKEDIVFLSINRYE-RKKNLELAIYSLNSLR 220 (390)
Q Consensus 150 ~~~~~~~~~~~~~~vi~~~-~~~~-----~~~~~~~--~~~~~~~~~l~~~~~~~i~~~g~~~-~~K~~~~ll~a~~~l~ 220 (390)
+.+. +..+.++.++.++ +|.- ....... .........+..+.+++++..-+.. ..+....++.++..+.
T Consensus 156 L~~~--G~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~ 233 (376)
T d1f6da_ 156 LLRE--NVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIA 233 (376)
T ss_dssp HHHT--TCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEECCCCBSSCCHHHHHHHHHHHHHH
T ss_pred HHhc--CCCccccceecCchHHHHHHHHhhhhccchhhhhhhccccccCCCCceEEEecccchhhhhhHHHHHHHHhhhh
Confidence 9987 5557889999986 3321 0110000 0000001001223556666666554 3445677788888877
Q ss_pred hhcccccccceEEEEEcCCCCCCcchhHHHHHHHH-HHHHcCCCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCcc
Q psy12587 221 SRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGV-LVKKLKLSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIV 299 (390)
Q Consensus 221 ~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~-~~~~~~l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~ 299 (390)
+...+ +.+++..... ..... ..+.....+++.+...+++.++..+++.|++++--| |..
T Consensus 234 ~~~~~-----~~ii~p~~~~----------~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~vignS-----ssg 293 (376)
T d1f6da_ 234 TTHQD-----IQIVYPVHLN----------PNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDS-----GGI 293 (376)
T ss_dssp HHCTT-----EEEEEECCBC----------HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESS-----SGG
T ss_pred hhcce-----eEEecccccc----------hhhhhhHhhhhcccccceeeccccHHHHHHHHhhceEEEecC-----cch
Confidence 66553 6665544321 22211 122233357899999999999999999999999654 567
Q ss_pred HHhhhhcCCCEEEecC-CCcccceecCcceeeecCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHHHHHHHHH
Q psy12587 300 PIEAMFCKRPVIAVNS-GGPKESVVDGRTGFLCESNEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQAFSIQLN 378 (390)
Q Consensus 300 ~~Ea~a~G~pvi~~~~-~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (390)
+.||-++|+|+|.-.. ..-++-+..+ +..++..|.+++.+++.++++++. ....+. .....|.--..++++.
T Consensus 294 i~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~v~~~~~~I~~ai~~~l~~~~-~~~~~~-----~~~npYGdG~as~rI~ 366 (376)
T d1f6da_ 294 QEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGTDKQRIVEEVTRLLKDEN-EYQAMS-----RAHNPYGDGQACSRIL 366 (376)
T ss_dssp GGTGGGGTCCEEECSSCCSCHHHHHHT-SEEECCSSHHHHHHHHHHHHHCHH-HHHHHH-----HSCCTTCCSCHHHHHH
T ss_pred HhhHHHhCCCEEEcCCCccCccceecC-eeEECCCCHHHHHHHHHHHHhChH-hhhhhc-----cCCCCCCCChHHHHHH
Confidence 7899999999997532 3344555443 445555599999999999988766 333321 1123344334566666
Q ss_pred HHHHh
Q psy12587 379 TIVNN 383 (390)
Q Consensus 379 ~~~~~ 383 (390)
+++++
T Consensus 367 ~iLk~ 371 (376)
T d1f6da_ 367 EALKN 371 (376)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66654
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.06 E-value=3.1e-09 Score=93.53 Aligned_cols=79 Identities=11% Similarity=0.054 Sum_probs=63.0
Q ss_pred CCCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCC----cccceecCcceeeecC---C
Q psy12587 262 LSDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGG----PKESVVDGRTGFLCES---N 334 (390)
Q Consensus 262 l~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~----~~e~i~~~~~g~~~~~---~ 334 (390)
.++|+.+.++++.. .+|..+|++|+ .|...++.||+++|+|+|+.+..+ ..+.+.+.+.|..++. +
T Consensus 283 ~~~nv~~~~~~p~~---~~l~~~~~~V~----hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~~ 355 (401)
T d1iira_ 283 DGADCFAIGEVNHQ---VLFGRVAAVIH----HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPT 355 (401)
T ss_dssp CGGGEEECSSCCHH---HHGGGSSEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCC
T ss_pred CCCCEEEEeccCHH---HHHhhcCEEEe----cCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEcCcCCCC
Confidence 46889999999865 57899999994 456779999999999999976543 3444555567877754 7
Q ss_pred HHHHHHHHHHHhc
Q psy12587 335 EEAFAKAMKKIVD 347 (390)
Q Consensus 335 ~~~l~~~i~~l~~ 347 (390)
+++++++|.++++
T Consensus 356 ~~~l~~ai~~~l~ 368 (401)
T d1iira_ 356 FDSLSAALATALT 368 (401)
T ss_dssp HHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999995
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=98.81 E-value=1.3e-07 Score=84.46 Aligned_cols=81 Identities=11% Similarity=0.040 Sum_probs=61.8
Q ss_pred CCcEEEecCCChHHHHHHH--HhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCCC----cccce-ecCcceeeecC--
Q psy12587 263 SDNVLFLTSPSDAAKISLF--KFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSGG----PKESV-VDGRTGFLCES-- 333 (390)
Q Consensus 263 ~~~v~~~g~~~~~e~~~~~--~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~~----~~e~i-~~~~~g~~~~~-- 333 (390)
++++.+..+++..+ ++ ..++++|. -|...++.||+.+|+|+|+.+..+ ....+ +..+.|..++.
T Consensus 318 ~~nv~~~~~~pq~~---lL~hp~~~~fIt----HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~ 390 (450)
T d2c1xa1 318 RGYGMVVPWAPQAE---VLAHEAVGAFVT----HCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGV 390 (450)
T ss_dssp TTTEEEESCCCHHH---HHTSTTEEEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGS
T ss_pred cccccccccCChHh---hhccCceeEEEc----cCCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEecCCC
Confidence 47899999999984 55 66777874 234568999999999999977532 22334 34467887764
Q ss_pred -CHHHHHHHHHHHhcCCh
Q psy12587 334 -NEEAFAKAMKKIVDNDG 350 (390)
Q Consensus 334 -~~~~l~~~i~~l~~~~~ 350 (390)
+.+++.++|.++++|+.
T Consensus 391 ~t~~~l~~ai~~vL~d~~ 408 (450)
T d2c1xa1 391 FTKSGLMSCFDQILSQEK 408 (450)
T ss_dssp CCHHHHHHHHHHHHHSHH
T ss_pred cCHHHHHHHHHHHhcCcH
Confidence 88999999999999975
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=98.65 E-value=3e-06 Score=78.50 Aligned_cols=203 Identities=10% Similarity=0.051 Sum_probs=136.9
Q ss_pred HHHHhcCcceEEEccHhHHHHHHHHh----ccCCCCceeecCCCCCCCCCCCCCc-------------------cc----
Q psy12587 129 EEWTTCKADKIVVNSEFTKSVVQATF----RSLDHKCLDILYPSVYTEGLEKTTP-------------------EP---- 181 (390)
Q Consensus 129 ~~~~~~~ad~ii~~s~~~~~~~~~~~----~~~~~~~~~vi~~~~~~~~~~~~~~-------------------~~---- 181 (390)
...+++.+..+-.+|.-..+..++.+ ...-+.++.-|-|||....+-.... ..
T Consensus 407 a~LAl~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~~i~~ITNGVh~~~Wl~~~n~~L~~l~~~~ig~~w~~~~~~l~~~ 486 (796)
T d1l5wa_ 407 ANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINL 486 (796)
T ss_dssp HHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGG
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHhhhhccccCCcccccccccccHHHHHhhhCHHHHHHHHhhcccccccCHHHHHHH
Confidence 34567778889999998888666532 1122468999999987654421100 00
Q ss_pred ------------h---------------hhhcC-CCCCCCCeEEEEeecccccCCHHHHHHHHHHHHh---hcccccccc
Q psy12587 182 ------------I---------------ENVLN-PLPGKEDIVFLSINRYERKKNLELAIYSLNSLRS---RLSDEMKTH 230 (390)
Q Consensus 182 ------------~---------------~~~~~-~l~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~---~~~~~~~~~ 230 (390)
+ +...+ .+. .+.+.++++-|+..+|...+++.-+..+.. ..+......
T Consensus 487 ~~~~~d~~~~~~l~~~k~~~K~~L~~~i~~~~g~~ld-p~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~P 565 (796)
T d1l5wa_ 487 EKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEIN-PQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVP 565 (796)
T ss_dssp GGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCC
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccC-hhhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCc
Confidence 0 00011 022 377899999999999999885544433222 111111124
Q ss_pred eEEEEEcCCCCCCcchhHHHHHHHHHHHHcC----C--CCcEEEecCCChHHHHHHHHhcceEEeCCC--CCCCCccHHh
Q psy12587 231 VKLVVAGGYDPHNIENVEYYKELGVLVKKLK----L--SDNVLFLTSPSDAAKISLFKFCHCIIYTPS--NEHFGIVPIE 302 (390)
Q Consensus 231 ~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~----l--~~~v~~~g~~~~~e~~~~~~~adv~v~ps~--~e~~~~~~~E 302 (390)
+.+++.|...+....++...+.+.+.++..+ + .-+|.|+...+-.-...++..|||.+..+. .|.+|++-+-
T Consensus 566 vq~IfaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~~kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMK 645 (796)
T d1l5wa_ 566 RVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMK 645 (796)
T ss_dssp EEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHH
T ss_pred eEEEEcCCCCCchHHHHHHHHHHHHHHHHhcCChhhccceeEEEeCCCchHHHHHHhcccchhhhCCCCCcccCCchHHH
Confidence 8999999988775555555555555544221 1 126888887776666789999999999876 6999999999
Q ss_pred hhhcCCCEEEecCCCcccceec--Ccceeeec
Q psy12587 303 AMFCKRPVIAVNSGGPKESVVD--GRTGFLCE 332 (390)
Q Consensus 303 a~a~G~pvi~~~~~~~~e~i~~--~~~g~~~~ 332 (390)
|+.-|.+.+++--|...|+.++ ++||+++-
T Consensus 646 aalNG~lnlstlDGw~vE~~~~vg~eN~f~fG 677 (796)
T d1l5wa_ 646 LALNGALTVGTLDGANVEIAEKVGEENIFIFG 677 (796)
T ss_dssp HHHTTCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred HHHcCCeeeecccchHHHHHHhcCccceEEec
Confidence 9999999999999998888764 77899884
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=98.59 E-value=2.2e-06 Score=76.55 Aligned_cols=114 Identities=12% Similarity=0.093 Sum_probs=76.5
Q ss_pred CCcEEEecCCChHHHHHHH--HhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCC----Ccccce-ecCcceeeecC--
Q psy12587 263 SDNVLFLTSPSDAAKISLF--KFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSG----GPKESV-VDGRTGFLCES-- 333 (390)
Q Consensus 263 ~~~v~~~g~~~~~e~~~~~--~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~----~~~e~i-~~~~~g~~~~~-- 333 (390)
++||.+..++++.+ ++ .+++++|. -|...++.||+.+|+|+|+.+.. .....+ +..+.|..++.
T Consensus 345 ~~Nv~~~~~~Pq~~---lL~hp~~~~fIt----HGG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~~~~ 417 (473)
T d2pq6a1 345 ADRGLIASWCPQDK---VLNHPSIGGFLT----HCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNV 417 (473)
T ss_dssp TTTEEEESCCCHHH---HHTSTTEEEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSC
T ss_pred cCceEEeeeCCHHH---HhcCCcCcEEEe----cCCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeCCCc
Confidence 57899999999874 67 57788884 23456899999999999997752 223333 44467887765
Q ss_pred CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhhcCHH-----HHHHHHHHHHHhhhh
Q psy12587 334 NEEAFAKAMKKIVDNDGNIIQQFSQFGFNRFNEKFSFQ-----AFSIQLNTIVNNMLD 386 (390)
Q Consensus 334 ~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 386 (390)
+.++++++|.++++|+. .++++++|.+.. +...-. .....+.+++++++.
T Consensus 418 t~~~l~~ai~~vl~d~~--~~~~r~~a~~l~-~~~~~a~~~gg~s~~~~~~~i~~~~~ 472 (473)
T d2pq6a1 418 KREELAKLINEVIAGDK--GKKMKQKAMELK-KKAEENTRPGGCSYMNLNKVIKDVLL 472 (473)
T ss_dssp CHHHHHHHHHHHHTSHH--HHHHHHHHHHHH-HHHHHHTSTTCHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHcCCh--HHHHHHHHHHHH-HHHHHHHhCCCCHHHHHHHHHHHHhc
Confidence 89999999999999875 234555555543 221100 123345666776653
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.57 E-value=2.3e-05 Score=72.66 Aligned_cols=205 Identities=10% Similarity=0.060 Sum_probs=138.7
Q ss_pred HHHHHhcCcceEEEccHhHHHHHHHHh----ccCCCCceeecCCCCCCCCCCCCCccc----------------------
Q psy12587 128 LEEWTTCKADKIVVNSEFTKSVVQATF----RSLDHKCLDILYPSVYTEGLEKTTPEP---------------------- 181 (390)
Q Consensus 128 ~~~~~~~~ad~ii~~s~~~~~~~~~~~----~~~~~~~~~vi~~~~~~~~~~~~~~~~---------------------- 181 (390)
+...++..+..+-.+|.-..+.+++.+ ....+.++.-+-|||.+..+-......
T Consensus 430 Ma~Lal~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~ki~~iTNGV~~rrWl~~~np~L~~l~~~~ig~~w~~d~~~l~~ 509 (824)
T d2gj4a1 430 MAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRK 509 (824)
T ss_dssp HHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGG
T ss_pred HHHHHHHhchhHHHHHHHHHHHHHHhhccccccCCCcceecccCcccCccchhccCHHHHHHHHhhhccccccCHHHHHH
Confidence 445567788889999988888777632 112246899999999877653211000
Q ss_pred ----------------------------hhhhcCCCCCCCCeEEEEeecccccCCHHHHH----HHHHHHHhhccccccc
Q psy12587 182 ----------------------------IENVLNPLPGKEDIVFLSINRYERKKNLELAI----YSLNSLRSRLSDEMKT 229 (390)
Q Consensus 182 ----------------------------~~~~~~~l~~~~~~~i~~~g~~~~~K~~~~ll----~a~~~l~~~~~~~~~~ 229 (390)
+.+..+..-..+.+.++++-|+..+|...+.+ ..+.++++. +.....
T Consensus 510 l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~-~~~~~~ 588 (824)
T d2gj4a1 510 LLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKE-PNKFVV 588 (824)
T ss_dssp GGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHC-TTSCCC
T ss_pred HHHhCCCHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCcchhhhhheeechhhhhhhhhHhhHHHHHHHhhhc-ccCCCC
Confidence 00000101223778899999999999998833 333454442 111123
Q ss_pred ceEEEEEcCCCCCCcchhHHHHHHHHHHHHcCCC------CcEEEecCCChHHHHHHHHhcceEEeCCC--CCCCCccHH
Q psy12587 230 HVKLVVAGGYDPHNIENVEYYKELGVLVKKLKLS------DNVLFLTSPSDAAKISLFKFCHCIIYTPS--NEHFGIVPI 301 (390)
Q Consensus 230 ~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~------~~v~~~g~~~~~e~~~~~~~adv~v~ps~--~e~~~~~~~ 301 (390)
.+.+++.|...+....++...+.+.+.++..+.. -+|.|+...+-.-...++..||+.+..|. .|..|++-+
T Consensus 589 P~q~IFaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~lkVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgM 668 (824)
T d2gj4a1 589 PRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM 668 (824)
T ss_dssp CEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHH
T ss_pred CeEEEEeCCCCCccHHHHHHHHHHHHHHHHHhcChhhccceeEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchh
Confidence 4899999988876554444444444444422211 25888887776666789999999999877 699999999
Q ss_pred hhhhcCCCEEEecCCCcccceec--CcceeeecC
Q psy12587 302 EAMFCKRPVIAVNSGGPKESVVD--GRTGFLCES 333 (390)
Q Consensus 302 Ea~a~G~pvi~~~~~~~~e~i~~--~~~g~~~~~ 333 (390)
-+|.-|.+.+++--|...|+.++ ++||+++-.
T Consensus 669 K~alNGal~lstlDGwnvEi~~~vg~~N~~~fG~ 702 (824)
T d2gj4a1 669 KFMLNGALTIGTMDGANVEMAEEAGEENFFIFGM 702 (824)
T ss_dssp HHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSC
T ss_pred HHHHcCCeeeccccchHHHHHHhcCcccEEEeCC
Confidence 99999999999999998887764 678888743
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=98.44 E-value=2.2e-05 Score=69.53 Aligned_cols=83 Identities=13% Similarity=0.050 Sum_probs=59.8
Q ss_pred CCcEEEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCC----Ccccc-eecCcceeeec-----
Q psy12587 263 SDNVLFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSG----GPKES-VVDGRTGFLCE----- 332 (390)
Q Consensus 263 ~~~v~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~----~~~e~-i~~~~~g~~~~----- 332 (390)
++++.+..+.+..++ -.+.+++++|. -|...++.||+.+|+|+|+.+.. ..... ++..+.|+.++
T Consensus 329 ~~n~~v~~~~pq~~~-l~~p~~~~fIt----HGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~~ 403 (461)
T d2acva1 329 EGKGMICGWAPQVEV-LAHKAIGGFVS----HCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRK 403 (461)
T ss_dssp HCSEEEESSCCHHHH-HHSTTEEEEEE----CCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCT
T ss_pred CCCeEEEecCCHHHH-HhcccCCEEEe----cCCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeeccccc
Confidence 467888888888753 35688999995 23446899999999999997652 22223 34445677654
Q ss_pred ----CCHHHHHHHHHHHhcCCh
Q psy12587 333 ----SNEEAFAKAMKKIVDNDG 350 (390)
Q Consensus 333 ----~~~~~l~~~i~~l~~~~~ 350 (390)
.++++++++|.++++++.
T Consensus 404 ~~~~~t~~~l~~a~~~vl~~d~ 425 (461)
T d2acva1 404 GSDVVAAEEIEKGLKDLMDKDS 425 (461)
T ss_dssp TCCCCCHHHHHHHHHHHTCTTC
T ss_pred cCCccCHHHHHHHHHHHhhCCH
Confidence 167999999999997543
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.32 E-value=7.2e-05 Score=66.33 Aligned_cols=81 Identities=12% Similarity=0.057 Sum_probs=59.0
Q ss_pred CCcEEEecCCChHHHHHHH--HhcceEEeCCCCCCCCccHHhhhhcCCCEEEecCC-C---cccce-ecCcceeeec---
Q psy12587 263 SDNVLFLTSPSDAAKISLF--KFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAVNSG-G---PKESV-VDGRTGFLCE--- 332 (390)
Q Consensus 263 ~~~v~~~g~~~~~e~~~~~--~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~~~~-~---~~e~i-~~~~~g~~~~--- 332 (390)
++||.+.+++|+.+ +| .+++++|. -|...++.||+.+|+|+|+.+.. . ....+ +..+.|+.+.
T Consensus 333 ~~nv~~~~w~Pq~~---lL~hp~~~~fVt----HGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~~~ 405 (471)
T d2vcha1 333 KRGFVIPFWAPQAQ---VLAHPSTGGFLT----HCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGD 405 (471)
T ss_dssp TTEEEEESCCCHHH---HHHSTTEEEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCT
T ss_pred CCCeeecccCCHHH---HhcCccCCEEEe----cCCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEecCC
Confidence 57899999999984 67 46778884 23456899999999999997752 2 22223 3334565542
Q ss_pred --C-CHHHHHHHHHHHhcCCh
Q psy12587 333 --S-NEEAFAKAMKKIVDNDG 350 (390)
Q Consensus 333 --~-~~~~l~~~i~~l~~~~~ 350 (390)
. +.+++.++|.++++|++
T Consensus 406 ~~~~t~~~l~~ai~~vl~~~~ 426 (471)
T d2vcha1 406 DGLVRREEVARVVKGLMEGEE 426 (471)
T ss_dssp TSCCCHHHHHHHHHHHHTSTH
T ss_pred CCcCCHHHHHHHHHHHhCCcH
Confidence 2 77999999999999874
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=97.42 E-value=0.0043 Score=52.13 Aligned_cols=101 Identities=14% Similarity=0.092 Sum_probs=65.0
Q ss_pred CCeEEEEee-cccccCC--HHHHHHHHHHHHhhcccccccceEEEEEcCCCCCCcchhHHHHHHHHHHHHcC---CCCcE
Q psy12587 193 EDIVFLSIN-RYERKKN--LELAIYSLNSLRSRLSDEMKTHVKLVVAGGYDPHNIENVEYYKELGVLVKKLK---LSDNV 266 (390)
Q Consensus 193 ~~~~i~~~g-~~~~~K~--~~~ll~a~~~l~~~~~~~~~~~~~l~i~G~~~~~~~~~~~y~~~~~~~~~~~~---l~~~v 266 (390)
...+++..| +....|. .+...+.+..+.+++ ..++++|...+. +..+...+... ...-+
T Consensus 180 ~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~~-------~~ivl~g~~~e~--------~~~~~~~~~~~~~~~~~~~ 244 (348)
T d1pswa_ 180 RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEG-------YQVVLFGSAKDH--------EAGNEILAALNTEQQAWCR 244 (348)
T ss_dssp SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTT-------CEEEECCCGGGH--------HHHHHHHTTSCHHHHTTEE
T ss_pred CCeEEeccccchhhccccchHHHhhhHHHHhhcC-------CccccccccchH--------HHHHHHHHhhhcccccccc
Confidence 445555555 3334454 455788888887763 567888865442 22222222211 12345
Q ss_pred EEecCCChHHHHHHHHhcceEEeCCCCCCCCccHHhhhhcCCCEEEe
Q psy12587 267 LFLTSPSDAAKISLFKFCHCIIYTPSNEHFGIVPIEAMFCKRPVIAV 313 (390)
Q Consensus 267 ~~~g~~~~~e~~~~~~~adv~v~ps~~e~~~~~~~Ea~a~G~pvi~~ 313 (390)
.+.|..+-.|+..++++||++|.+.. ..+=-|.++|+|+|+-
T Consensus 245 ~l~g~~sl~el~~li~~a~l~I~~Dt-----g~~HlAaa~g~p~i~l 286 (348)
T d1pswa_ 245 NLAGETQLDQAVILIAACKAIVTNDS-----GLMHVAAALNRPLVAL 286 (348)
T ss_dssp ECTTTSCHHHHHHHHHTSSEEEEESS-----HHHHHHHHTTCCEEEE
T ss_pred cccCCccHHHHHHHHhcceeEeecCc-----cHHHHHHHcCCCEEEE
Confidence 66788899999999999999998652 3344599999999994
|
| >d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: FucT-like domain: Alpha1,3-fucosyltransferase FucT species: Helicobacter pylori [TaxId: 210]
Probab=88.09 E-value=2.2 Score=34.76 Aligned_cols=78 Identities=12% Similarity=0.019 Sum_probs=56.7
Q ss_pred HHHHHHhcceEEeC--CCCCC-CCccHHhhhhcCCCEEEecCCCcccceecCcceee-ec-C-CHHHHHHHHHHHhcCCh
Q psy12587 277 KISLFKFCHCIIYT--PSNEH-FGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFL-CE-S-NEEAFAKAMKKIVDNDG 350 (390)
Q Consensus 277 ~~~~~~~adv~v~p--s~~e~-~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~-~~-~-~~~~l~~~i~~l~~~~~ 350 (390)
..++++.....++. +...+ ..-++.+|+.+|+-+|......+.+.+..+ +++ +. . +.+++++.|.++.++++
T Consensus 225 K~~~l~~ykF~l~~EN~~~~~YvTEKi~da~~~g~iPIy~G~~~i~~~f~~~--sfI~~~df~s~~el~~~i~~l~~n~~ 302 (349)
T d2nzwa1 225 KNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFNPK--SFVNVHDFKNFDEAIDYIKYLHTHKN 302 (349)
T ss_dssp HHHHHTTEEEEEEECSSCCTTCCCTHHHHHHHTTCEEEEESCTTGGGTSCGG--GSEEGGGSSSHHHHHHHHHHHHTCHH
T ss_pred HHHHHhCCCeEEEECCcCCCCCcchHHHHHHhCCeEEEEECCCcHHHcCCCc--cEEEhhhCCCHHHHHHHHHHHhcCHH
Confidence 36889988888876 33333 344799999999888887767777776443 333 33 2 89999999999988887
Q ss_pred hHHHHHH
Q psy12587 351 NIIQQFS 357 (390)
Q Consensus 351 ~~~~~~~ 357 (390)
.+.++-
T Consensus 303 -~Y~~~~ 308 (349)
T d2nzwa1 303 -AYLDML 308 (349)
T ss_dssp -HHHHHH
T ss_pred -HHHHHH
Confidence 666653
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| >d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: DHS-like NAD/FAD-binding domain superfamily: DHS-like NAD/FAD-binding domain family: Pyruvate oxidase and decarboxylase, middle domain domain: Acetohydroxyacid synthase catalytic subunit species: Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]
Probab=85.58 E-value=4.9 Score=28.98 Aligned_cols=108 Identities=11% Similarity=0.094 Sum_probs=57.6
Q ss_pred EEEEcCCCCCCcchhHHHHHHHHHHHHcCCC----------------CcEEEecCCChHHHHHHHHhcceEEeCC-CCCC
Q psy12587 233 LVVAGGYDPHNIENVEYYKELGVLVKKLKLS----------------DNVLFLTSPSDAAKISLFKFCHCIIYTP-SNEH 295 (390)
Q Consensus 233 l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~----------------~~v~~~g~~~~~e~~~~~~~adv~v~ps-~~e~ 295 (390)
++++|.|-... .+++.++++.++++ .++-..|.........++..||++|.-. ....
T Consensus 23 vii~G~G~~~a------~~~l~~lae~~~~Pv~tt~~~~g~~~~~h~~~~G~~G~~g~~~~~~~~~~aDlil~lG~~l~~ 96 (179)
T d1ybha1 23 VLYVGGGCLNS------SDELGRFVELTGIPVASTLMGLGSYPCDDELSLHMLGMHGTVYANYAVEHSDLLLAFGVRFDD 96 (179)
T ss_dssp EEEECGGGTTC------HHHHHHHHHHHCCCEEECTTTTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCCH
T ss_pred EEEECHHHHHH------HHHHHHHHhhhcccceecccccCCCccccccccccCCCcCCHHHHHHHHhhhhhhhccccccc
Confidence 56667654321 15677777777653 1233344444555678999999988643 3222
Q ss_pred CCccHHhhhhcCCCEEEecCCCcccceecCcceeeecCCHHHHHHHHHHHhc
Q psy12587 296 FGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVD 347 (390)
Q Consensus 296 ~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~ 347 (390)
....-.+...-+..+|.-|.... ++-......+-+..|+..+.+++.+.++
T Consensus 97 ~~~~~~~~~~~~~kiI~Id~d~~-~~~~~~~~~~~i~~D~~~~l~~L~~~l~ 147 (179)
T d1ybha1 97 RVTGKLEAFASRAKIVHIDIDSA-EIGKNKTPHVSVCGDVKLALQGMNKVLE 147 (179)
T ss_dssp HHHSSGGGTTTTSEEEEEESCTT-TTTSSSCCSEEEESCHHHHHHHHHHHHH
T ss_pred cccccccccCCCCeEEEEeCccc-ccccccCCCceEEeccHHHHHHHHHHHH
Confidence 11112344556777887665432 2212222222222278777777776654
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| >d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: DHS-like NAD/FAD-binding domain superfamily: DHS-like NAD/FAD-binding domain family: Pyruvate oxidase and decarboxylase, middle domain domain: Pyruvate oxidase species: Lactobacillus plantarum [TaxId: 1590]
Probab=82.12 E-value=7.2 Score=28.19 Aligned_cols=108 Identities=13% Similarity=0.070 Sum_probs=56.8
Q ss_pred EEEEcCCCCCCcchhHHHHHHHHHHHHcCCCC-------------cEEE---ecCCChHHHHHHHHhcceEEeCCC-CCC
Q psy12587 233 LVVAGGYDPHNIENVEYYKELGVLVKKLKLSD-------------NVLF---LTSPSDAAKISLFKFCHCIIYTPS-NEH 295 (390)
Q Consensus 233 l~i~G~~~~~~~~~~~y~~~~~~~~~~~~l~~-------------~v~~---~g~~~~~e~~~~~~~adv~v~ps~-~e~ 295 (390)
++++|.|-... .+++.++++.++++= .-.+ .|.........++.+||++++-.. ...
T Consensus 34 vii~G~G~~~a------~~~l~~lae~~~~Pv~tt~~~~g~~~~~hp~~~G~~G~~~~~~~~~~i~~aDlil~vG~~l~~ 107 (183)
T d2ez9a1 34 LIYYGIGARKA------GKELEQLSKTLKIPLMSTYPAKGIVADRYPAYLGSANRVAQKPANEALAQADVVLFVGNNYPF 107 (183)
T ss_dssp EEEECGGGTTC------HHHHHHHHHHHTCCEEECGGGTTSSCTTCTTBCCCCSSSSCHHHHHHHHHCSEEEEESCCCTT
T ss_pred EEEEcCCcccc------hHHHHHHhhccceEEEeeccccccccccCccccccccccccHHHHhhhhccCceEEeecccCc
Confidence 56666654321 256777777776531 1112 233345566889999998876432 211
Q ss_pred CCccHHhhhhcCCCEEEecCCCcccceecCcceeeecCCHHHHHHHHHHHhcCC
Q psy12587 296 FGIVPIEAMFCKRPVIAVNSGGPKESVVDGRTGFLCESNEEAFAKAMKKIVDND 349 (390)
Q Consensus 296 ~~~~~~Ea~a~G~pvi~~~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~l~~~~ 349 (390)
+. ....+.-+..+|.-+... .++-.....-+-+..|+..+.++|...++..
T Consensus 108 ~~--~~~~~~~~~~iI~Id~d~-~~i~~~~~~~~~i~~D~~~~l~~L~~~l~~~ 158 (183)
T d2ez9a1 108 AE--VSKAFKNTRYFLQIDIDP-AKLGKRHKTDIAVLADAQKTLAAILAQVSER 158 (183)
T ss_dssp TT--TTTTTTTCSEEEEEESCG-GGTTSSSCCSEEEESCHHHHHHHHHHTCCCC
T ss_pred cc--ceeecccccchheeeccH-HHHhhcCCCCeEEEECHHHHHHHHHHHhhhc
Confidence 11 123445567788665432 1221111221222227888888888877653
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