Psyllid ID: psy12689

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--
Protein Sequence
MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHERRGSVHFELMID
Secondary Structure (PSIPRED)
cccEEEEcccccccccccccccccccccEEEEEEEccccccEEEEEEEEEccccccccccccEEEEEEEEEc
Secondary Structure Prediction (SSPRO)
cccEEEccccccccEEccccccccccccEEEEEEEcccccEEEEEEEEEEEEcEcccccccccEEEEEEEEc
Coil and Loop (DISEMBL)
mgtlsyypwkgfpgyffpfqntegylapviavhfespaigVLINIECKAwahnihhdrherrgsvHFELMID
Flexible Loop (DISEMBL)
mgtlsyypwKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHhdrherrgsvhfelmid
Low Complexity Region (SEG)
MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHERRGSVHFELMID
Disordered region (IsUnstruct)
***LSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDR**************
Disordered Region (DISOPRED)
MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHERRGSVHFELMID
Disordered Region (DISEMBL)
MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHERRGSVHFELMID
Disordered Region (DISPRO)
MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHERRGSVHFELMID
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHERRGSVHFELMID
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	72	2.2.26 [Sep-21-2011]
Q24048	323	Sodium/potassium-transpor	yes	N/A	1.0	0.222	0.625	5e-25
P25169	315	Sodium/potassium-transpor	N/A	N/A	1.0	0.228	0.527	4e-19
Q24046	309	Sodium/potassium-transpor	no	N/A	0.958	0.223	0.450	3e-16
Q93235	320	Sodium/potassium-transpor	yes	N/A	1.0	0.225	0.375	2e-10
Q9XUY5	317	Probable sodium/potassium	no	N/A	1.0	0.227	0.347	2e-08
A8X4W9	326	Probable sodium/potassium	N/A	N/A	1.0	0.220	0.347	4e-08
P05027	303	Sodium/potassium-transpor	yes	N/A	0.958	0.227	0.333	7e-05
P08251	305	Sodium/potassium-transpor	yes	N/A	0.958	0.226	0.294	8e-05
P05028	303	Sodium/potassium-transpor	N/A	N/A	0.958	0.227	0.320	0.0001
P06583	303	Sodium/potassium-transpor	yes	N/A	0.958	0.227	0.320	0.0002

>sp|Q24048|ATPB2_DROME Sodium/potassium-transporting ATPase subunit beta-2 OS=Drosophila melanogaster GN=nrv2 PE=1 SV=2

 Score =  112 bits (281), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 45/72 (62%), Positives = 62/72 (86%)

Query: 1   MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHE 60
           +G ++Y P +GFPGYF+P+QN+EGYL+P++AVHF+ P  G++IN+EC+AWA NI HDR E
Sbjct: 252 IGAVNYLPIRGFPGYFYPYQNSEGYLSPLVAVHFQRPKRGIIINVECRAWARNIIHDRKE 311

Query: 61  RRGSVHFELMID 72
           R GSVH+EL+ID
Sbjct: 312 RIGSVHYELLID 323

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.
Drosophila melanogaster (taxid: 7227)

>sp|P25169|AT1B1_ARTSF Sodium/potassium-transporting ATPase subunit beta OS=Artemia franciscana PE=2 SV=1

 Score = 93.2 bits (230), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/72 (52%), Positives = 53/72 (73%)

Query: 1   MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHE 60
           +GT++Y P++GFP Y++P+ N  GYL PV+A+ F S   G  +N+ECKAWA+NI  DR  
Sbjct: 244 IGTITYTPFRGFPAYYYPYLNVPGYLTPVVALQFGSLQNGQAVNVECKAWANNISRDRQR 303

Query: 61  RRGSVHFELMID 72
           R GSVHFE+ +D
Sbjct: 304 RLGSVHFEIRMD 315

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.

Artemia franciscana (taxid: 6661)

>sp|Q24046|ATPB1_DROME Sodium/potassium-transporting ATPase subunit beta-1 OS=Drosophila melanogaster GN=nrv1 PE=1 SV=2

 Score = 84.0 bits (206), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/71 (45%), Positives = 52/71 (73%), Gaps = 2/71 (2%)

Query: 4   LSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDR--HER 61
           + Y+P +GFP Y++PF N  GYL+P++AV F SP  G ++++EC+AWA NI +     +R
Sbjct: 239 IRYFPSQGFPSYYYPFLNQPGYLSPLVAVQFNSPPKGQMLDVECRAWAKNIQYSGSVRDR 298

Query: 62  RGSVHFELMID 72
           +GSV F++++D
Sbjct: 299 KGSVTFQILLD 309

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.

Drosophila melanogaster (taxid: 7227)

>sp|Q93235|AT1B1_CAEEL Sodium/potassium-transporting ATPase subunit beta-1 OS=Caenorhabditis elegans GN=nkb-1 PE=1 SV=1

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/72 (37%), Positives = 45/72 (62%)

Query: 1   MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHE 60
           +G ++Y P  G  G ++P+  T+GY  P+  V F++     L+ +EC+A+A NI HD   
Sbjct: 239 IGKVTYMPSNGIDGRYYPYVFTKGYQQPIAMVKFDTIPRNKLVIVECRAYALNIEHDISS 298

Query: 61  RRGSVHFELMID 72
           R G V+FE+M++
Sbjct: 299 RLGMVYFEVMVE 310

Non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane (By similarity). May also may function in the peptidic vesicle transport pathway from the endoplasmic reticulum for the defecation behaviors.

Caenorhabditis elegans (taxid: 6239)

>sp|Q9XUY5|AT1B3_CAEEL Probable sodium/potassium-transporting ATPase subunit beta-3 OS=Caenorhabditis elegans GN=nkb-3 PE=3 SV=1

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 40/72 (55%)

Query: 1   MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHE 60
           +G + Y P  G  G ++P+     Y  P+  V F++     L+ +EC+A+A NI HD   
Sbjct: 236 LGKVKYIPETGIDGRYYPYVFVPSYQQPIAMVKFDTIPRNKLVIVECRAYASNIEHDIST 295

Query: 61  RRGSVHFELMID 72
           R G V+FEL ++
Sbjct: 296 RLGMVYFELFVE 307

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane (By similarity). Implicated in genomic response to various soil bacteria that affects fitness, lifespan and brood size.

Caenorhabditis elegans (taxid: 6239)

>sp|A8X4W9|AT1B3_CAEBR Probable sodium/potassium-transporting ATPase subunit beta-3 OS=Caenorhabditis briggsae GN=nkb-3 PE=3 SV=3

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 40/72 (55%)

Query: 1   MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHE 60
           +G + Y P  G  G ++P+     Y  P+  V F++     L+ +EC+A+A NI HD   
Sbjct: 245 LGKVKYIPEAGIDGRYYPYVFLPSYQQPIAMVKFDTIPRNKLVIVECRAYASNIEHDVST 304

Query: 61  RRGSVHFELMID 72
           R G V+FEL ++
Sbjct: 305 RIGMVYFELFVE 316

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane. Implicated in genomic response to various soil bacteria that affects fitness, lifespan and brood size.

Caenorhabditis briggsae (taxid: 6238)

>sp|P05027|AT1B1_PIG Sodium/potassium-transporting ATPase subunit beta-1 OS=Sus scrofa GN=ATP1B1 PE=1 SV=2

 Score = 46.2 bits (108), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 9/78 (11%)

Query: 1   MGTLSYYPWKGFPGY---FFPFQNT---EGYLAPVIAVHFESPAIGVLINIECKAWAHNI 54
           +GT+ Y+   G+PG+   ++P+        YL P++AV F +  +   I IECKA+  NI
Sbjct: 224 VGTMEYFGLGGYPGFPLQYYPYYGKLLQPKYLQPLMAVQFTNLTMDTEIRIECKAYGENI 283

Query: 55  HH---DRHERRGSVHFEL 69
            +   DR + R  V  E+
Sbjct: 284 GYSEKDRFQGRFDVKIEV 301

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.

Sus scrofa (taxid: 9823)

>sp|P08251|AT1B1_CHICK Sodium/potassium-transporting ATPase subunit beta-1 OS=Gallus gallus GN=ATP1B1 PE=2 SV=1

 Score = 45.8 bits (107), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 9/78 (11%)

Query: 1   MGTLSYYPWKGFPGY---FFPFQN---TEGYLAPVIAVHFESPAIGVLINIECKAWAHNI 54
           +G + YY   G+PG+   ++P+        YL P++AV F +    V + +ECK +  NI
Sbjct: 225 IGMVEYYGMGGYPGFALQYYPYYGRLLQPQYLQPLVAVQFTNLTYDVEVRVECKEYGQNI 284

Query: 55  HH---DRHERRGSVHFEL 69
            +   DR + R  + F++
Sbjct: 285 QYSDKDRFQGRFDIKFDI 302

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.

Gallus gallus (taxid: 9031)

>sp|P05028|AT1B1_SHEEP Sodium/potassium-transporting ATPase subunit beta-1 OS=Ovis aries GN=ATP1B1 PE=2 SV=1

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 9/78 (11%)

Query: 1   MGTLSYYPWKGFPGY---FFPFQNT---EGYLAPVIAVHFESPAIGVLINIECKAWAHNI 54
           +G++ Y+   G+PG+   ++P+        YL P++AV F +  +   I IECKA+  NI
Sbjct: 224 VGSIEYFGLGGYPGFPLQYYPYYGKLLQPKYLQPLLAVQFTNLTMDTEIRIECKAYGENI 283

Query: 55  HH---DRHERRGSVHFEL 69
            +   DR + R  V  E+
Sbjct: 284 GYSEKDRFQGRFDVKIEV 301

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.

Ovis aries (taxid: 9940)

>sp|P06583|AT1B1_CANFA Sodium/potassium-transporting ATPase subunit beta-1 OS=Canis familiaris GN=ATP1B1 PE=1 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 9/78 (11%)

Query: 1   MGTLSYYPWKGFPGY---FFPFQNT---EGYLAPVIAVHFESPAIGVLINIECKAWAHNI 54
           +G + Y+   G+PG+   ++P+        YL P++AV F +  +   I IECKA+  NI
Sbjct: 224 IGNVEYFGLGGYPGFPLQYYPYYGKLLQPKYLQPLLAVQFTNLTMDTEIRIECKAYGENI 283

Query: 55  HH---DRHERRGSVHFEL 69
            +   DR + R  V  E+
Sbjct: 284 GYSEKDRFQGRFDVKIEV 301

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.

Canis familiaris (taxid: 9615)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	72
170051877	292	sodium/potassium-dependent ATPase beta-2	1.0	0.246	0.763	2e-27
242019430	319	sodium/potassium-transporting ATPase sub	1.0	0.225	0.75	1e-26
157127261	312	sodium/potassium-dependent atpase beta-2	1.0	0.230	0.75	2e-26
158297493	323	AGAP007791-PA [Anopheles gambiae str. PE	1.0	0.222	0.694	3e-26
332024991	312	Sodium/potassium-transporting ATPase sub	1.0	0.230	0.736	7e-26
322787042	314	hypothetical protein SINV_11685 [Solenop	1.0	0.229	0.722	2e-25
340729126	315	PREDICTED: sodium/potassium-transporting	1.0	0.228	0.736	3e-25
350401355	315	PREDICTED: sodium/potassium-transporting	1.0	0.228	0.736	3e-25
48095204	315	PREDICTED: sodium/potassium-transporting	1.0	0.228	0.736	3e-25
380013839	315	PREDICTED: sodium/potassium-transporting	1.0	0.228	0.736	3e-25

>gi|170051877|ref|XP_001861965.1| sodium/potassium-dependent ATPase beta-2 subunit [Culex quinquefasciatus] gi|167872921|gb|EDS36304.1| sodium/potassium-dependent ATPase beta-2 subunit [Culex quinquefasciatus]

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 55/72 (76%), Positives = 64/72 (88%)

Query: 1   MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHE 60
           +G ++Y P +GFPGYFFPF+NTEGYL P++AVHFESP  GVLINIECKAWA NIHHDR +
Sbjct: 221 IGPINYIPRRGFPGYFFPFKNTEGYLPPIVAVHFESPKNGVLINIECKAWAKNIHHDRAD 280

Query: 61  RRGSVHFELMID 72
           RRGSVHFELM+D
Sbjct: 281 RRGSVHFELMVD 292

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242019430|ref|XP_002430164.1| sodium/potassium-transporting ATPase subunit beta-2, putative [Pediculus humanus corporis] gi|212515255|gb|EEB17426.1| sodium/potassium-transporting ATPase subunit beta-2, putative [Pediculus humanus corporis]

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 54/72 (75%), Positives = 64/72 (88%)

Query: 1   MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHE 60
           +G ++Y P +GFPGYFFP++N EGYL+P++AV+FE P  GVLINIECKAWAHNIHHDR E
Sbjct: 248 IGPINYMPERGFPGYFFPYENNEGYLSPIVAVYFERPVSGVLINIECKAWAHNIHHDRLE 307

Query: 61  RRGSVHFELMID 72
           RRGSVHFELMID
Sbjct: 308 RRGSVHFELMID 319

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157127261|ref|XP_001654893.1| sodium/potassium-dependent atpase beta-2 subunit [Aedes aegypti] gi|108872996|gb|EAT37221.1| AAEL010783-PA [Aedes aegypti]

 Score =  122 bits (307), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/72 (75%), Positives = 63/72 (87%)

Query: 1   MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHE 60
           +G ++Y+P +GFPGYFFPF+N EGYL P++AVHFESP  GVLINIECKAWA NI HDR E
Sbjct: 241 IGPINYFPRRGFPGYFFPFKNIEGYLPPIVAVHFESPKNGVLINIECKAWARNIVHDRAE 300

Query: 61  RRGSVHFELMID 72
           RRGSVHFELM+D
Sbjct: 301 RRGSVHFELMVD 312

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158297493|ref|XP_317717.3| AGAP007791-PA [Anopheles gambiae str. PEST] gi|157015222|gb|EAA12801.3| AGAP007791-PA [Anopheles gambiae str. PEST]

 Score =  122 bits (305), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 50/72 (69%), Positives = 64/72 (88%)

Query: 1   MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHE 60
           +G + YYP +GFPGY++P++N+EGYL+P++AVHFE P  G++INIECKAWAHNI HDRHE
Sbjct: 252 VGQIQYYPRRGFPGYYYPYENSEGYLSPLVAVHFERPVRGIIINIECKAWAHNIKHDRHE 311

Query: 61  RRGSVHFELMID 72
           R G+VHFELMID
Sbjct: 312 RMGTVHFELMID 323

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332024991|gb|EGI65178.1| Sodium/potassium-transporting ATPase subunit beta-2 [Acromyrmex echinatior]

 Score =  121 bits (303), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 53/72 (73%), Positives = 62/72 (86%)

Query: 1   MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHE 60
           MG + Y P +GFPGY+FPF+NT+GYL+P++AV FE P  GVLINIECKAWAHNI HDR E
Sbjct: 241 MGAIQYIPRRGFPGYYFPFKNTQGYLSPLVAVFFEKPKYGVLINIECKAWAHNIIHDRFE 300

Query: 61  RRGSVHFELMID 72
           RRGSVHFELM+D
Sbjct: 301 RRGSVHFELMVD 312

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322787042|gb|EFZ13266.1| hypothetical protein SINV_11685 [Solenopsis invicta]

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 52/72 (72%), Positives = 61/72 (84%)

Query: 1   MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHE 60
           MG + Y P +GFPGY+FPF+N +GYL+P++AV FE P  GVLINIECKAWAHNI HDR E
Sbjct: 243 MGAIQYLPRRGFPGYYFPFKNAQGYLSPLVAVFFEKPKYGVLINIECKAWAHNIIHDRFE 302

Query: 61  RRGSVHFELMID 72
           RRGSVHFELM+D
Sbjct: 303 RRGSVHFELMVD 314

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340729126|ref|XP_003402859.1| PREDICTED: sodium/potassium-transporting ATPase subunit beta-2-like [Bombus terrestris]

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 53/72 (73%), Positives = 60/72 (83%)

Query: 1   MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHE 60
           MG + Y P +GFPGY+FPF NT GYL+P++AV FE P  GVLINIECKAWAHNI HDR E
Sbjct: 244 MGAIQYIPRRGFPGYYFPFTNTPGYLSPLVAVFFEKPKYGVLINIECKAWAHNIIHDRFE 303

Query: 61  RRGSVHFELMID 72
           RRGSVHFELM+D
Sbjct: 304 RRGSVHFELMVD 315

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350401355|ref|XP_003486126.1| PREDICTED: sodium/potassium-transporting ATPase subunit beta-2-like [Bombus impatiens]

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 53/72 (73%), Positives = 60/72 (83%)

Query: 1   MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHE 60
           MG + Y P +GFPGY+FPF NT GYL+P++AV FE P  GVLINIECKAWAHNI HDR E
Sbjct: 244 MGAIQYIPRRGFPGYYFPFTNTPGYLSPLVAVFFEKPKYGVLINIECKAWAHNIIHDRFE 303

Query: 61  RRGSVHFELMID 72
           RRGSVHFELM+D
Sbjct: 304 RRGSVHFELMVD 315

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|48095204|ref|XP_392257.1| PREDICTED: sodium/potassium-transporting ATPase subunit beta-2-like [Apis mellifera]

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 53/72 (73%), Positives = 60/72 (83%)

Query: 1   MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHE 60
           MG + Y P +GFPGY+FPF NT GYL+P++AV FE P  GVLINIECKAWAHNI HDR E
Sbjct: 244 MGAIQYIPRRGFPGYYFPFTNTPGYLSPLVAVFFEKPQYGVLINIECKAWAHNIIHDRFE 303

Query: 61  RRGSVHFELMID 72
           RRGSVHFELM+D
Sbjct: 304 RRGSVHFELMVD 315

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380013839|ref|XP_003690953.1| PREDICTED: sodium/potassium-transporting ATPase subunit beta-2-like [Apis florea]

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 53/72 (73%), Positives = 60/72 (83%)

Query: 1   MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHE 60
           MG + Y P +GFPGY+FPF NT GYL+P++AV FE P  GVLINIECKAWAHNI HDR E
Sbjct: 244 MGAIQYIPRRGFPGYYFPFTNTPGYLSPLVAVFFERPKYGVLINIECKAWAHNIIHDRFE 303

Query: 61  RRGSVHFELMID 72
           RRGSVHFELM+D
Sbjct: 304 RRGSVHFELMVD 315

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	72
FB|FBgn0015777	323	nrv2 "nervana 2" [Drosophila m	1.0	0.222	0.625	1.2e-24
FB|FBgn0032946	311	nrv3 "nervana 3" [Drosophila m	0.916	0.212	0.671	3.4e-22
FB|FBgn0015776	309	nrv1 "nervana 1" [Drosophila m	0.958	0.223	0.450	7.1e-16
WB|WBGene00007646	320	nkb-1 [Caenorhabditis elegans	1.0	0.225	0.375	2.5e-10
WB|WBGene00010117	317	nkb-3 [Caenorhabditis elegans	1.0	0.227	0.347	1.1e-08
UNIPROTKB|F1NRB7	273	ATP1B1 "Sodium/potassium-trans	0.958	0.252	0.307	4.7e-06
UNIPROTKB|F1NSV6	298	ATP1B1 "Sodium/potassium-trans	0.958	0.231	0.307	5.6e-06
UNIPROTKB|J9JIL3	270	ATP1B1 "Sodium/potassium-trans	0.958	0.255	0.333	1.6e-05
UNIPROTKB|P05027	303	ATP1B1 "Sodium/potassium-trans	0.958	0.227	0.333	2.1e-05
UNIPROTKB|P08251	305	ATP1B1 "Sodium/potassium-trans	0.958	0.226	0.294	2.1e-05

FB|FBgn0015777 nrv2 "nervana 2" [Drosophila melanogaster (taxid:7227)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 45/72 (62%), Positives = 62/72 (86%)

Query:     1 MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHE 60
             +G ++Y P +GFPGYF+P+QN+EGYL+P++AVHF+ P  G++IN+EC+AWA NI HDR E
Sbjct:   252 IGAVNYLPIRGFPGYFYPYQNSEGYLSPLVAVHFQRPKRGIIINVECRAWARNIIHDRKE 311

Query:    61 RRGSVHFELMID 72
             R GSVH+EL+ID
Sbjct:   312 RIGSVHYELLID 323

GO:0005886 "plasma membrane" evidence=ISS;IDA

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=ISS;NAS;IMP

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IC;ISS

GO:0008324 "cation transmembrane transporter activity" evidence=IDA

GO:0006812 "cation transport" evidence=IDA

GO:0007424 "open tracheal system development" evidence=IMP

GO:0035151 "regulation of tube size, open tracheal system" evidence=IMP

GO:0005918 "septate junction" evidence=IDA

GO:0035158 "regulation of tube diameter, open tracheal system" evidence=IMP

GO:0035159 "regulation of tube length, open tracheal system" evidence=IMP

GO:0019991 "septate junction assembly" evidence=IMP

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0060857 "establishment of glial blood-brain barrier" evidence=IMP

FB|FBgn0032946 nrv3 "nervana 3" [Drosophila melanogaster (taxid:7227)]

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 45/67 (67%), Positives = 55/67 (82%)

Query:     6 YYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHERRGSV 65
             YYP  GFP Y+FPF+N +GY+ P++AV F +   GVLINIECKAWA NI+HDR +RRGSV
Sbjct:   246 YYPRMGFPRYYFPFKNIQGYIPPIVAVQF-TVETGVLINIECKAWARNINHDRSDRRGSV 304

Query:    66 HFELMID 72
             HFELM+D
Sbjct:   305 HFELMVD 311

GO:0005886 "plasma membrane" evidence=IDA;NAS

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IEA;NAS

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=NAS

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

FB|FBgn0015776 nrv1 "nervana 1" [Drosophila melanogaster (taxid:7227)]

 Score = 199 (75.1 bits), Expect = 7.1e-16, P = 7.1e-16
 Identities = 32/71 (45%), Positives = 52/71 (73%)

Query:     4 LSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDR--HER 61
             + Y+P +GFP Y++PF N  GYL+P++AV F SP  G ++++EC+AWA NI +     +R
Sbjct:   239 IRYFPSQGFPSYYYPFLNQPGYLSPLVAVQFNSPPKGQMLDVECRAWAKNIQYSGSVRDR 298

Query:    62 RGSVHFELMID 72
             +GSV F++++D
Sbjct:   299 KGSVTFQILLD 309

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=ISS;NAS;IMP

GO:0008324 "cation transmembrane transporter activity" evidence=IDA

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IC;ISS;NAS

GO:0006812 "cation transport" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISS;IDA

GO:0006813 "potassium ion transport" evidence=IEA;NAS

GO:0006814 "sodium ion transport" evidence=IEA;NAS

GO:0005515 "protein binding" evidence=IPI

WB|WBGene00007646 nkb-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 151 (58.2 bits), Expect = 2.5e-10, P = 2.5e-10
 Identities = 27/72 (37%), Positives = 45/72 (62%)

Query:     1 MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHE 60
             +G ++Y P  G  G ++P+  T+GY  P+  V F++     L+ +EC+A+A NI HD   
Sbjct:   239 IGKVTYMPSNGIDGRYYPYVFTKGYQQPIAMVKFDTIPRNKLVIVECRAYALNIEHDISS 298

Query:    61 RRGSVHFELMID 72
             R G V+FE+M++
Sbjct:   299 RLGMVYFEVMVE 310

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0046034 "ATP metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0010171 "body morphogenesis" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0040018 "positive regulation of multicellular organism growth" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0048477 "oogenesis" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

WB|WBGene00010117 nkb-3 [Caenorhabditis elegans (taxid:6239)]

 Score = 136 (52.9 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 25/72 (34%), Positives = 40/72 (55%)

Query:     1 MGTLSYYPWKGFPGYFFPFQNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHE 60
             +G + Y P  G  G ++P+     Y  P+  V F++     L+ +EC+A+A NI HD   
Sbjct:   236 LGKVKYIPETGIDGRYYPYVFVPSYQQPIAMVKFDTIPRNKLVIVECRAYASNIEHDIST 295

Query:    61 RRGSVHFELMID 72
             R G V+FEL ++
Sbjct:   296 RLGMVYFELFVE 307

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0046034 "ATP metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1NRB7 ATP1B1 "Sodium/potassium-transporting ATPase subunit beta-1" [Gallus gallus (taxid:9031)]

 Score = 111 (44.1 bits), Expect = 4.7e-06, P = 4.7e-06
 Identities = 24/78 (30%), Positives = 42/78 (53%)

Query:     1 MGTLSYYPWKGFPGY---FFPFQNT---EGYLAPVIAVHFESPAIGVLINIECKAWAHNI 54
             +G + YY   G+PG+   ++P+        YL P++AV F +    V + +ECKA+  NI
Sbjct:   193 IGMVEYYGMGGYPGFALQYYPYYGRLLQPQYLQPLVAVQFTNLTYDVEVRVECKAYGQNI 252

Query:    55 HH---DRHERRGSVHFEL 69
              +   DR + R  + F++
Sbjct:   253 QYSDKDRFQGRFDIKFDI 270

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

UNIPROTKB|F1NSV6 ATP1B1 "Sodium/potassium-transporting ATPase subunit beta-1" [Gallus gallus (taxid:9031)]

 Score = 111 (44.1 bits), Expect = 5.6e-06, P = 5.6e-06
 Identities = 24/78 (30%), Positives = 42/78 (53%)

Query:     1 MGTLSYYPWKGFPGY---FFPFQNT---EGYLAPVIAVHFESPAIGVLINIECKAWAHNI 54
             +G + YY   G+PG+   ++P+        YL P++AV F +    V + +ECKA+  NI
Sbjct:   218 IGMVEYYGMGGYPGFALQYYPYYGRLLQPQYLQPLVAVQFTNLTYDVEVRVECKAYGQNI 277

Query:    55 HH---DRHERRGSVHFEL 69
              +   DR + R  + F++
Sbjct:   278 QYSDKDRFQGRFDIKFDI 295

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=IEA

UNIPROTKB|J9JIL3 ATP1B1 "Sodium/potassium-transporting ATPase subunit beta-1" [Sus scrofa (taxid:9823)]

 Score = 106 (42.4 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 26/78 (33%), Positives = 42/78 (53%)

Query:     1 MGTLSYYPWKGFPGY---FFPFQNT---EGYLAPVIAVHFESPAIGVLINIECKAWAHNI 54
             +GT+ Y+   G+PG+   ++P+        YL P++AV F +  +   I IECKA+  NI
Sbjct:   191 VGTMEYFGLGGYPGFPLQYYPYYGKLLQPKYLQPLMAVQFTNLTMDTEIRIECKAYGENI 250

Query:    55 HH---DRHERRGSVHFEL 69
              +   DR + R  V  E+
Sbjct:   251 GYSEKDRFQGRFDVKIEV 268

GO:0016323 "basolateral plasma membrane" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IEA

UNIPROTKB|P05027 ATP1B1 "Sodium/potassium-transporting ATPase subunit beta-1" [Sus scrofa (taxid:9823)]

 Score = 106 (42.4 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 26/78 (33%), Positives = 42/78 (53%)

Query:     1 MGTLSYYPWKGFPGY---FFPFQNT---EGYLAPVIAVHFESPAIGVLINIECKAWAHNI 54
             +GT+ Y+   G+PG+   ++P+        YL P++AV F +  +   I IECKA+  NI
Sbjct:   224 VGTMEYFGLGGYPGFPLQYYPYYGKLLQPKYLQPLMAVQFTNLTMDTEIRIECKAYGENI 283

Query:    55 HH---DRHERRGSVHFEL 69
              +   DR + R  V  E+
Sbjct:   284 GYSEKDRFQGRFDVKIEV 301

GO:0016323 "basolateral plasma membrane" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IEA

UNIPROTKB|P08251 ATP1B1 "Sodium/potassium-transporting ATPase subunit beta-1" [Gallus gallus (taxid:9031)]

 Score = 106 (42.4 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 23/78 (29%), Positives = 41/78 (52%)

Query:     1 MGTLSYYPWKGFPGY---FFPFQNT---EGYLAPVIAVHFESPAIGVLINIECKAWAHNI 54
             +G + YY   G+PG+   ++P+        YL P++AV F +    V + +ECK +  NI
Sbjct:   225 IGMVEYYGMGGYPGFALQYYPYYGRLLQPQYLQPLVAVQFTNLTYDVEVRVECKEYGQNI 284

Query:    55 HH---DRHERRGSVHFEL 69
              +   DR + R  + F++
Sbjct:   285 QYSDKDRFQGRFDIKFDI 302

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q24048	ATPB2_DROME	No assigned EC number	0.625	1.0	0.2229	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	72
pfam00287	289	pfam00287, Na_K-ATPase, Sodium / potassium ATPase	1e-11
TIGR01107	289	TIGR01107, Na_K_ATPase_bet, Sodium Potassium ATPas	8e-08

>gnl|CDD|215838 pfam00287, Na_K-ATPase, Sodium / potassium ATPase beta chain

 Score = 57.4 bits (139), Expect = 1e-11
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 6/73 (8%)

Query: 2   GTLSYYPWKG-FPGYFFPFQNTE---GYLAPVIAVHFESPAIGVLINIECKAWAHNIHHD 57
           G + Y+P  G F   ++P+   +    YL P++AV F +    V + +ECK +A NI +D
Sbjct: 217 GNIEYFPMGGGFDLMYYPYYGKKLQPNYLQPLVAVKFTNLTRNVEVRVECKIYAENIKND 276

Query: 58  R-HERR-GSVHFE 68
              +R  G V F+
Sbjct: 277 DPRDRFLGRVEFK 289

Length = 289

>gnl|CDD|162204 TIGR01107, Na_K_ATPase_bet, Sodium Potassium ATPase beta subunit

 Score = 46.6 bits (111), Expect = 8e-08
 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 8/75 (10%)

Query: 2   GTLSYYPWKG-FPGYFFPF---QNTEGYLAPVIAVHFESPAIGVLINIECKAWAHNI--- 54
           G + YYP  G FP  +FP+   +    YL P++AV F +  +   + IECK +  NI   
Sbjct: 212 GNVEYYPMNGGFPLQYFPYYGKKLQPNYLQPLVAVQFTNLTMNTEVRIECKIYGENIAYS 271

Query: 55  -HHDRHERRGSVHFE 68
              DR   R      
Sbjct: 272 NEKDRFLGRVDFKIT 286

This model describes the Na+/K+ ATPase beta subunit in eukaryotes. Na+/K+ ATPase(also called Sodium-Potassium pump) is intimately associated with the plasma membrane. It couples the energy released by the hydrolysis of ATP to extrude 3 Na+ ions, with the concomitant uptake of 2K+ ions, against their ionic gradients [Transport and binding proteins, Cations and iron carrying compounds]. Length = 289

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	72
TIGR01107	289	Na_K_ATPase_bet Sodium Potassium ATPase beta subun	100.0
PF00287	289	Na_K-ATPase: Sodium / potassium ATPase beta chain;	99.97
KOG3927|consensus	300		99.94

>TIGR01107 Na_K_ATPase_bet Sodium Potassium ATPase beta subunit

Probab=100.00  E-value=4.3e-34  Score=209.34  Aligned_cols=72  Identities=35%  Similarity=0.781  Sum_probs=68.5

Q ss_pred             CcceeEecCCC-CCCCceeccC---CCCCcCCeEEEEeeCCCCCcEEEEEEEeecCCCcCC--CCCceeeEEEEEEeC
Q psy12689          1 MGTLSYYPWKG-FPGYFFPFQN---TEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHD--RHERRGSVHFELMID   72 (72)
Q Consensus         1 ig~i~Y~P~~g-f~~~YfPy~~---~~~Y~~PlVAVqf~n~~~n~~i~IeCk~~a~NI~~d--~~~~~G~v~F~l~vd   72 (72)
                      +|+|+|||++| ||++||||+|   |++|+||||||||+|+++|++|+||||+||+||.++  +++++|||+|+|+||
T Consensus       211 ~g~i~YyP~~G~f~~~YfPY~gk~~q~~YlqPLVAVqf~~~~~n~~v~VeCk~~a~NI~~~~~~d~~~G~v~f~l~i~  288 (289)
T TIGR01107       211 IGNVEYYPMNGGFPLQYFPYYGKKLQPNYLQPLVAVQFTNLTMNTEVRIECKIYGENIAYSNEKDRFLGRVDFKITIK  288 (289)
T ss_pred             ccceEECCCCCCcCcccccccCcccCcCCcCCeEEEEeecCCCCcEEEEEEEEeccCCccCCCccccCCeEEEEEEec
Confidence            68999999998 9999999999   999999999999999999999999999999999994  466999999999997

This model describes the Na+/K+ ATPase beta subunit in eukaryotes. Na+/K+ ATPase(also called Sodium-Potassium pump) is intimately associated with the plasma membrane. It couples the energy released by the hydrolysis of ATP to extrude 3 Na+ ions, with the concomitant uptake of 2K+ ions, against their ionic gradients.

>PF00287 Na_K-ATPase: Sodium / potassium ATPase beta chain; InterPro: IPR000402 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=99.97  E-value=3.7e-31  Score=193.14  Aligned_cols=68  Identities=49%  Similarity=0.998  Sum_probs=45.4

Q ss_pred             CcceeEecCC-CCCCCceeccC---CCCCcCCeEEEEeeCCCCCcEEEEEEEeecCCCcCCC--CCceeeEEEE
Q psy12689          1 MGTLSYYPWK-GFPGYFFPFQN---TEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDR--HERRGSVHFE   68 (72)
Q Consensus         1 ig~i~Y~P~~-gf~~~YfPy~~---~~~Y~~PlVAVqf~n~~~n~~i~IeCk~~a~NI~~d~--~~~~G~v~F~   68 (72)
                      +|+++|||++ |||.+||||+|   |++|+||||||||+|+++|++|+||||+||+||++|+  ++++|+|+||
T Consensus       216 i~~i~y~P~~ggf~~~YfPy~~k~~~~~Y~~PlVAVqf~n~~~n~~i~veCk~wakNI~~d~~~~~~~G~V~F~  289 (289)
T PF00287_consen  216 IGPIEYYPSNGGFPLMYFPYYGKKAQPGYLSPLVAVQFTNPPRNVEINVECKAWAKNIPYDDERDKFLGRVHFK  289 (289)
T ss_dssp             ---EEEE-STSEEEGGG-SB-TTTTSTT-----EEEEESSS-SSS-EEEEEEE-STT----SSS-TTSSB--EE
T ss_pred             eeeEEEECCCCCcceeECCccCCccCCCCcCCeEEEEEecCCCCcEEEEEEEEeCCCCCCCCcCCcccEEEEeC
Confidence            5889999999 79999999999   9999999999999999999999999999999999976  5699999997

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the beta subunit found in the P-type cation exchange ATPases located in the plasma membranes of animal cells. These P-ATPases include both H+/K+-ATPases (3.6.3.10 from EC) and Na+/K+-ATPases (3.6.3.9 from EC), which belong to the IIC subfamily of ATPases [, ]. These ATPases catalyse the hydrolysis of ATP coupled with the exchange of cations, pumping one cation out of the cell (H+ or Na+) in exchange for K+. These ATPases contain an alpha subunit (IPR005775 from INTERPRO) that is the catalytic component, and a glycosylated beta subunit that regulates the number of sodium pumps transported to the plasma membrane through the assembly of alpha/beta heterodimers. The beta subunit has three highly conserved disulphide bonds within the extracellular domain that stabilise the alpha subunit, the alpha/beta interaction, and the catalytic activity of the alpha subunit []. Different beta isoforms exist, permitting greater regulatory control. An example of a H+/K+-ATPase is the gastric pump responsible for acid secretion in the stomach, transporting protons from the cytoplasm of parietal cells to create a large pH gradient in exchange for the internalisation of potassium ions, using ATP hydrolysis to drive the pump []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0005391 sodium:potassium-exchanging ATPase activity, 0006754 ATP biosynthetic process, 0006813 potassium ion transport, 0006814 sodium ion transport, 0016020 membrane; PDB: 2XZB_B 3A3Y_B 3N2F_D 3B8E_D 3KDP_D 3N23_D.

>KOG3927|consensus

Probab=99.94  E-value=1.5e-27  Score=175.72  Aligned_cols=72  Identities=47%  Similarity=0.955  Sum_probs=69.2

Q ss_pred             CcceeEecCCC-CCCCceecc---CCCCCcCCeEEEEeeCCCCCcEEEEEEEeecCCCcCCCCCceeeEEEEEEeC
Q psy12689          1 MGTLSYYPWKG-FPGYFFPFQ---NTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHDRHERRGSVHFELMID   72 (72)
Q Consensus         1 ig~i~Y~P~~g-f~~~YfPy~---~~~~Y~~PlVAVqf~n~~~n~~i~IeCk~~a~NI~~d~~~~~G~v~F~l~vd   72 (72)
                      +|.++|||++| ||.+||||+   +|++|+||||||||+|+++|++|.||||+||+||.++++++.|+|+|+|+|+
T Consensus       222 i~~~~y~p~~g~f~~~Y~Py~gk~~~~~y~~plvavkf~ni~~n~~v~IeCka~a~n~~~~~~~~~g~V~f~l~i~  297 (300)
T KOG3927|consen  222 IGKVAYFPETGDFPLEYYPYYGKKNQPGYLQPLVAVKFTNIPRNEEVNIECKAWAENINHDRDTFGGRVRFELLIE  297 (300)
T ss_pred             ccceeeeccCCCCCceecCccccccCCCccCceEEEecCCCCCCceEEEEeecccccCcchhhhhcceEEEEEecc
Confidence            57899999999 999999999   8999999999999999999999999999999998888888999999999985

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	72
3kdp_B	286	Crystal Structure Of The Sodium-potassium Pump Leng		4e-06
3n23_B	277	Crystal Structure Of The High Affinity Complex Betw		5e-06

>pdb|3KDP|B Chain B, Crystal Structure Of The Sodium-potassium Pump Length = 286

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 1   MGTLSYYPWKGFPGY---FFPFQNT---EGYLAPVIAVHFESPAIGVLINIECKAWAHNI 54
           +GT+ Y+   G+PG+   ++P+        YL P++AV F +  +   I IECKA+  NI
Sbjct: 207 VGTMEYFGLGGYPGFPLQYYPYYGKLLQPKYLQPLMAVQFTNLTMDTEIRIECKAYGENI 266
Query: 55  HH---DRHERRGSVHFEL 69
            +   DR + R  V  E+
Sbjct: 267 GYSEKDRFQGRFDVKIEV 284

>pdb|3N23|B Chain B, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 277

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 1   MGTLSYYPWKGFPGY---FFPFQNT---EGYLAPVIAVHFESPAIGVLINIECKAWAHNI 54
           +GT+ Y+   G+PG+   ++P+        YL P++AV F +  +   I IECKA+  NI
Sbjct: 198 VGTMEYFGLGGYPGFPLQYYPYYGKLLQPKYLQPLMAVQFTNLTMDTEIRIECKAYGENI 257
Query: 55  HH---DRHERRGSVHFEL 69
            +   DR + R  V  E+
Sbjct: 258 GYSEKDRFQGRFDVKIEV 275

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	72
3ixz_B	290	Potassium-transporting ATPase subunit beta; ION pu	3e-27
3kdp_B	286	Sodium/potassium-transporting ATPase subunit beta;	2e-25
2zxe_B	305	Na+,K+-ATPase beta subunit; membrane protein, ION	3e-24

>3ixz_B Potassium-transporting ATPase subunit beta; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_B Length = 290

 Score = 98.6 bits (245), Expect = 3e-27
 Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 6/78 (7%)

Query: 1   MGTLSYYPWKG-FPGYFFPFQNTE---GYLAPVIAVHFESPAIGVLINIECKAWAHNIHH 56
              + Y+P  G +  ++FP+   +    Y  P++A    +      + I CK  A ++  
Sbjct: 212 PLQVEYFPANGTYSLHYFPYYGKKAQPHYSNPLVAAKLLNVPRNRDVVIVCKILAEHVSF 271

Query: 57  D--RHERRGSVHFELMID 72
           D       G V F+L I 
Sbjct: 272 DNPHDPYEGKVEFKLKIQ 289

>3kdp_B Sodium/potassium-transporting ATPase subunit beta; alpha helical, heterotrimeric membrane protein complex, ATP- hydrolase, ION transport, magnesium; HET: CLR; 3.50A {Sus scrofa} PDB: 3n2f_B* 3n23_B* Length = 286

 Score = 94.0 bits (233), Expect = 2e-25
 Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 7/79 (8%)

Query: 1   MGTLSYYPWKGFPGY---FFPFQN---TEGYLAPVIAVHFESPAIGVLINIECKAWAHNI 54
           +GT+ Y+   G+PG+   ++P+        YL P++AV F +  +   I IECKA+  NI
Sbjct: 207 VGTMEYFGLGGYPGFPLQYYPYYGKLLQPKYLQPLMAVQFTNLTMDTEIRIECKAYGENI 266

Query: 55  HHDRHER-RGSVHFELMID 72
            +   +R +G    ++ + 
Sbjct: 267 GYSEKDRFQGRFDVKIEVK 285

>2zxe_B Na+,K+-ATPase beta subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_B* 3b8e_B* Length = 305

 Score = 90.9 bits (225), Expect = 3e-24
 Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 7/78 (8%)

Query: 1   MGTLSYYP---WKGFPGYFFPFQN---TEGYLAPVIAVHFESPAIGVLINIECKAWAHNI 54
           +G++ Y+    + GFP  ++P+      + YL P++A+ F +    + + IECK +  NI
Sbjct: 226 IGSIEYFGLGGYAGFPLQYYPYYGKRLQKKYLQPLLAIQFTNLTQNMELRIECKVYGENI 285

Query: 55  HHDRHERRGSVHFELMID 72
            +   + R    FE+ I+
Sbjct: 286 DYSEKD-RFRGRFEVKIE 302

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	72
3ixz_B	290	Potassium-transporting ATPase subunit beta; ION pu	100.0
3kdp_B	286	Sodium/potassium-transporting ATPase subunit beta;	99.98
2zxe_B	305	Na+,K+-ATPase beta subunit; membrane protein, ION	99.98

>3ixz_B Potassium-transporting ATPase subunit beta; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_B 2xzb_B

Probab=100.00  E-value=7.4e-34  Score=206.79  Aligned_cols=71  Identities=25%  Similarity=0.498  Sum_probs=66.5

Q ss_pred             cceeEecCC-CCCCCceecc---CCCCCcCCeEEEEeeCCCCCcEEEEEEEeecCCCcCC-CCC-ceeeEEEEEEeC
Q psy12689          2 GTLSYYPWK-GFPGYFFPFQ---NTEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHD-RHE-RRGSVHFELMID   72 (72)
Q Consensus         2 g~i~Y~P~~-gf~~~YfPy~---~~~~Y~~PlVAVqf~n~~~n~~i~IeCk~~a~NI~~d-~~~-~~G~v~F~l~vd   72 (72)
                      |+|+|||++ |||++||||+   +|++|+||||||||+|+++|++|+||||+||+||.+| ++| ++|||+|+|+|+
T Consensus       213 ~~i~YyP~~ggf~~~YfPYygk~~q~~YlqPLVAVqf~n~~~n~~v~VeCk~~a~NI~~d~~~d~~~G~V~Fkl~i~  289 (290)
T 3ixz_B          213 LQVEYFPANGTYSLHYFPYYGKKAQPHYSNPLVAAKLLNVPRNRDVVIVCKILAEHVSFDNPHDPYEGKVEFKLKIQ  289 (290)
T ss_pred             ceEEECCCCCCcCceeCCccCCcCCcCCcCCeEEEEEecCCCCcEEEEEEEEeccCCccCCCCCCccceEEEEEEec
Confidence            679999999 6999999999   6999999999999999999999999999999999996 344 899999999985

>3kdp_B Sodium/potassium-transporting ATPase subunit beta; alpha helical, heterotrimeric membrane protein complex, ATP- hydrolase, ION transport, magnesium; HET: CLR; 3.50A {Sus scrofa} PDB: 3n2f_B* 3n23_B*

Probab=99.98  E-value=2.6e-34  Score=208.89  Aligned_cols=72  Identities=31%  Similarity=0.695  Sum_probs=67.9

Q ss_pred             CcceeEecCC---CCCCCceeccCC---CCCcCCeEEEEeeCCCCCcEEEEEEEeecCCCcC-CCCCceeeEEEEEEeC
Q psy12689          1 MGTLSYYPWK---GFPGYFFPFQNT---EGYLAPVIAVHFESPAIGVLINIECKAWAHNIHH-DRHERRGSVHFELMID   72 (72)
Q Consensus         1 ig~i~Y~P~~---gf~~~YfPy~~~---~~Y~~PlVAVqf~n~~~n~~i~IeCk~~a~NI~~-d~~~~~G~v~F~l~vd   72 (72)
                      +|+|+|||++   |||++||||+|+   ++|+||||||||+|+++|++|+||||+||+||.+ |+++++|||+|+|+|.
T Consensus       207 ig~i~YyP~~g~~gfp~~YfPYygk~~~~~YlqPLVAVqf~n~~~n~~v~VeCk~~a~NI~~~~~d~~~G~v~fkl~i~  285 (286)
T 3kdp_B          207 VGTMEYFGLGGYPGFPLQYYPYYGKLLQPKYLQPLMAVQFTNLTMDTEIRIECKAYGENIGYSEKDRFQGRFDVKIEVK  285 (286)
T ss_dssp             CCCBCCCCTTSCSSCBTTSCSBCTTTSCTTCCCCCCCBCBCCSCCSCCCCBEEEECSTTCCCCSSCTTTTSCCBEEECC
T ss_pred             ccceEEcCCCCCCCCCcccCCCCCCcCCCCCcCCeEEEEeecCCCCcEEEEEEEEeccCCCcCCCccccceEEEEEEec
Confidence            6899999997   599999999996   9999999999999999999999999999999999 5677999999999984

>2zxe_B Na+,K+-ATPase beta subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_B* 3b8e_B*

Probab=99.98  E-value=1.9e-33  Score=205.91  Aligned_cols=72  Identities=26%  Similarity=0.687  Sum_probs=68.0

Q ss_pred             CcceeEecCC---CCCCCceeccC---CCCCcCCeEEEEeeCCCCCcEEEEEEEeecCCCcCC-CCCceeeEEEEEEeC
Q psy12689          1 MGTLSYYPWK---GFPGYFFPFQN---TEGYLAPVIAVHFESPAIGVLINIECKAWAHNIHHD-RHERRGSVHFELMID   72 (72)
Q Consensus         1 ig~i~Y~P~~---gf~~~YfPy~~---~~~Y~~PlVAVqf~n~~~n~~i~IeCk~~a~NI~~d-~~~~~G~v~F~l~vd   72 (72)
                      +|+|+|||++   |||++||||+|   |++|+||||||||+|+++|++|+||||+||+||.+| +++++|||+|+|+||
T Consensus       226 ~g~i~Y~P~~g~~gfp~~YfPY~gk~~~~~Yl~PLVAVqf~n~~~n~~v~VeCka~a~NI~~~~~d~~~G~v~fkl~i~  304 (305)
T 2zxe_B          226 IGSIEYFGLGGYAGFPLQYYPYYGKRLQKKYLQPLLAIQFTNLTQNMELRIECKVYGENIDYSEKDRFRGRFEVKIEVK  304 (305)
T ss_dssp             CSCEEEECGGGCSEEEGGGCSBCCTTTCTTCCCCEEEEEECCSCCSSCEEEEEEECCSSCCCCSSCTTSSBCCEEEEEC
T ss_pred             cCCeEEECCCCCCCcCccccCCCCccCCcCCcCCeEEEEeecCCCCCEEEEEEEEeccCCCcCCCccccceEEEEEEec
Confidence            5899999998   79999999999   999999999999999999999999999999999775 466999999999996

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00