Psyllid ID: psy12795

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-
Protein Sequence
MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSLMADLTNES
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHHHHHcccccccccHHHHcccccccccccccccHHHHHHHcccccccccccccccccccccEEEcccccccHHHHHHHHHccccccEEEEEEEEEEccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEcccccccHHHHHHHHHHHcccccccccccccHHHccEEEcccccccHHHHHHHHHccccccEEEEEEEEEcccccc
Coil and Loop (DISEMBL)
mgndaplaclsefQPLLYDYFKQLFAQLLPVLLSVTTMYCSlslqvtnppidpfREKVVMSLmcpigpeanilepsakqchrlflpnpllslydLEVIRLNTHRGWKVMKVSLMADLTNES
Flexible Loop (DISEMBL)
MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSLMADLTNES
Low Complexity Region (SEG)
MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSLMADLTNES
Disordered region (IsUnstruct)
******LACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSLMA******
Disordered Region (DISOPRED)
MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSLMADL****
Disordered Region (DISEMBL)
MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSLMADLTNES
Disordered Region (DISPRO)
***DAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSLMADLT***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSLMADLTNES
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	121	2.2.26 [Sep-21-2011]
Q0JKD0	2167	Glutamate synthase 1 [NAD	yes	N/A	0.735	0.041	0.467	9e-24
Q03460	2194	Glutamate synthase [NADH]	N/A	N/A	0.735	0.040	0.457	1e-23
Q9LV03	2208	Glutamate synthase 1 [NAD	yes	N/A	0.735	0.040	0.457	2e-23
Q0DG35	2188	Glutamate synthase 2 [NAD	no	N/A	0.735	0.040	0.457	2e-23
Q9C102	2111	Putative glutamate syntha	yes	N/A	0.776	0.044	0.456	1e-22
Q12680	2145	Glutamate synthase [NADH]	yes	N/A	0.809	0.045	0.440	5e-22
P55038	1556	Ferredoxin-dependent glut	N/A	N/A	0.793	0.061	0.418	2e-16
P96218	1527	Glutamate synthase [NADPH	yes	N/A	0.636	0.050	0.421	4e-15
P39812	1520	Glutamate synthase [NADPH	yes	N/A	0.793	0.063	0.385	6e-15
Q06434	1536	Ferredoxin-dependent glut	N/A	N/A	0.677	0.053	0.431	6e-15

>sp|Q0JKD0|GLT1_ORYSJ Glutamate synthase 1 [NADH], chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0681900 PE=2 SV=1

 Score =  108 bits (270), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 50/107 (46%), Positives = 68/107 (63%), Gaps = 18/107 (16%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MGND PLA +S  + L ++YFKQ+FAQ                  VTNPPIDP REK+V 
Sbjct: 603 MGNDTPLAVMSNREKLTFEYFKQMFAQ------------------VTNPPIDPIREKIVT 644

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWK 107
           S+ C IGPE ++LE + KQC+RL L  PL+S+ ++E I+   +RGW+
Sbjct: 645 SMECMIGPEGDLLETTEKQCNRLALEGPLVSIDEMEAIKKMNYRGWR 691

Involved in glutamate biosynthesis and plays a major role in the primary ammonium ions assimilation in seedling roots. May be involved in the reutilization of glutamine in developing organs. Plays a role in the development of tillers.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 1EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 4

>sp|Q03460|GLSN_MEDSA Glutamate synthase [NADH], amyloplastic OS=Medicago sativa PE=1 SV=1

 Score =  108 bits (269), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/107 (45%), Positives = 66/107 (61%), Gaps = 18/107 (16%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MGND PLA +S  + L ++YFKQ+FAQ                  VTNPPIDP REK+V 
Sbjct: 604 MGNDTPLAVMSNREKLTFEYFKQMFAQ------------------VTNPPIDPIREKIVT 645

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWK 107
           S+ C +GPE ++ E + +QCHRL L  PLLS  ++E I+   +RGW+
Sbjct: 646 SMRCMVGPEGDLTETTEEQCHRLSLKGPLLSTKEMEAIKKMNYRGWR 692

Medicago sativa (taxid: 3879)

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q9LV03|GLUT1_ARATH Glutamate synthase 1 [NADH], chloroplastic OS=Arabidopsis thaliana GN=GLT1 PE=1 SV=2

 Score =  107 bits (268), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/107 (45%), Positives = 66/107 (61%), Gaps = 18/107 (16%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MGND PLA +S  + L ++YFKQ+FAQ                  VTNPPIDP REK+V 
Sbjct: 622 MGNDTPLAVMSNREKLCFEYFKQMFAQ------------------VTNPPIDPIREKIVT 663

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWK 107
           S+ C IGPE ++ E + +QCHRL L  PLL + ++E I+   +RGW+
Sbjct: 664 SMECMIGPEGDLTETTEEQCHRLSLKGPLLKIEEMEAIKKMNYRGWR 710

Involved in glutamate biosynthesis. Required for non-photorespiratory ammonium assimilation. Probably involved in primary ammonium assimilation in roots.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q0DG35|GLT2_ORYSJ Glutamate synthase 2 [NADH], chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0555600 PE=2 SV=2

 Score =  107 bits (267), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/107 (45%), Positives = 67/107 (62%), Gaps = 18/107 (16%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MGND PLA +S  + L ++YFKQ+FAQ                  VTNPPIDP REK+V 
Sbjct: 610 MGNDTPLAVMSNREKLTFEYFKQMFAQ------------------VTNPPIDPIREKIVT 651

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWK 107
           S+ C IGPE ++ E + +QCHRL L +PLL+  ++E I+   +RGW+
Sbjct: 652 SMECMIGPEGDLSETTERQCHRLTLKSPLLNTNEMEAIKKMNYRGWR 698

Involved in glutamate biosynthesis.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q9C102|GLT1_SCHPO Putative glutamate synthase [NADPH] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=glt1 PE=2 SV=1

 Score =  104 bits (260), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 53/116 (45%), Positives = 68/116 (58%), Gaps = 22/116 (18%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MGNDA +ACLS+   LLYDYF+QLFAQ                  VTNPPIDP RE +VM
Sbjct: 558 MGNDAAIACLSDQPRLLYDYFRQLFAQ------------------VTNPPIDPIREAIVM 599

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHR---GWKVMKVSL 113
           SL C IGP  N+LE +  QC RL +P P+L++ +   ++ N  R    WKV  + +
Sbjct: 600 SLQCYIGPSGNLLEINQSQCRRLRMPTPILTVEEFNALK-NVDRIYPDWKVASIDI 654

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q12680|GLT1_YEAST Glutamate synthase [NADH] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GLT1 PE=1 SV=2

 Score =  102 bits (255), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 52/118 (44%), Positives = 68/118 (57%), Gaps = 20/118 (16%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MGNDAPLACL+E   LLYDYF+QLFAQ                  VTNPPIDP RE  VM
Sbjct: 544 MGNDAPLACLNENPVLLYDYFRQLFAQ------------------VTNPPIDPIREANVM 585

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIR--LNTHRGWKVMKVSLMAD 116
           SL C +GP+ N+LE  + QC RL L +P+L   + + ++     +  W V ++ +  D
Sbjct: 586 SLECYVGPQGNLLEMHSSQCDRLLLKSPILHWNEFQALKNIEAAYPSWSVAEIDITFD 643

Forms L-glutamate from L-glutamine and 2-oxoglutarate. Represents an alternative pathway to L-glutamate dehydrogenase for the biosynthesis of L-glutamate. Participates with glutamine synthetase in ammonia assimilation processes. The enzyme is specific for NADH, L-glutamine and 2-oxoglutarate.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P55038|GLTS_SYNY3 Ferredoxin-dependent glutamate synthase 2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=gltS PE=1 SV=2

 Score = 84.3 bits (207), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/117 (41%), Positives = 64/117 (54%), Gaps = 21/117 (17%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MG+D PLA LS    LLYDYFKQ FAQ                  VTNPPIDP RE +VM
Sbjct: 511 MGDDTPLAVLSHKPRLLYDYFKQRFAQ------------------VTNPPIDPLRENLVM 552

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSLMADL 117
           SL   +G   N+LEP A+    + L +PL++  +L+ I+       +V +VS + DL
Sbjct: 553 SLAMFLGKRGNLLEPKAESARTIKLRSPLVNEVELQAIKTGQ---LQVAEVSTLYDL 606

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

EC: 1

EC: .

EC: 4

EC: .

EC: 7

EC: .

EC: 1

>sp|P96218|GLTB_MYCTU Glutamate synthase [NADPH] large chain OS=Mycobacterium tuberculosis GN=gltB PE=1 SV=3

 Score = 79.7 bits (195), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 18/95 (18%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MG D P+A LS+   +LYDYF QLFAQ                  VTNPP+D  RE+VV 
Sbjct: 495 MGTDTPVAVLSQRPRMLYDYFHQLFAQ------------------VTNPPLDAIREEVVT 536

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDL 95
           SL    G E ++L P    CH++ LP P+L  ++L
Sbjct: 537 SLQGTTGGERDLLNPDQNSCHQIVLPQPILRNHEL 571

Mycobacterium tuberculosis (taxid: 1773)

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 3

>sp|P39812|GLTA_BACSU Glutamate synthase [NADPH] large chain OS=Bacillus subtilis (strain 168) GN=gltA PE=2 SV=3

 Score = 79.3 bits (194), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 44/114 (38%), Positives = 60/114 (52%), Gaps = 18/114 (15%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MGNDAPLA LS+    L++YFKQLFAQ                  VTNPPID  RE++V 
Sbjct: 493 MGNDAPLAVLSDRAQSLFNYFKQLFAQ------------------VTNPPIDAIREQLVT 534

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSLM 114
           S M  +G E ++L PS +   R+ L  P+LS      ++   H   K  K+ ++
Sbjct: 535 STMTWLGAEGDLLHPSERNVRRIKLYTPVLSNEQFYALKTIVHPDLKSQKIDVL 588

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q06434|GLTB_ANTSP Ferredoxin-dependent glutamate synthase OS=Antithamnion sp. GN=gltB PE=3 SV=1

 Score = 79.3 bits (194), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 44/102 (43%), Positives = 60/102 (58%), Gaps = 20/102 (19%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MG+D PL  LSE   L+YDYFKQ FAQ                  VTNP IDP RE +VM
Sbjct: 506 MGDDTPLPILSEKPHLIYDYFKQRFAQ------------------VTNPAIDPLRESLVM 547

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNT 102
           SL+  +GP+ NILEP+A     + L +P+++  + E+ +LN+
Sbjct: 548 SLITYLGPKGNILEPTAIMAKSIKLESPIIN--ENELAQLNS 587

Antithamnion sp (taxid: 2767)

EC: 1

EC: .

EC: 4

EC: .

EC: 7

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
328721168	2080	PREDICTED: putative glutamate synthase [	0.735	0.042	0.747	6e-42
307187474	1987	Glutamate synthase [NADH], amyloplastic	0.785	0.047	0.628	6e-38
307210154	2138	Putative glutamate synthase [NADPH] [Har	0.785	0.044	0.628	2e-37
322792674	2065	hypothetical protein SINV_12348 [Solenop	0.735	0.043	0.672	2e-37
332030526	2061	Putative glutamate synthase [Acromyrmex	0.834	0.049	0.605	3e-37
383865379	2063	PREDICTED: putative glutamate synthase [	0.735	0.043	0.654	1e-36
383865377	2063	PREDICTED: putative glutamate synthase [	0.735	0.043	0.654	1e-36
195440030	2118	GK12671 [Drosophila willistoni] gi|19416	0.735	0.042	0.644	2e-36
345480329	2007	PREDICTED: putative glutamate synthase [	0.735	0.044	0.663	4e-36
328792962	1910	PREDICTED: putative glutamate synthase [	0.735	0.046	0.654	8e-36

>gi|328721168|ref|XP_001948786.2| PREDICTED: putative glutamate synthase [NADPH]-like [Acyrthosiphon pisum]

 Score =  174 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 80/107 (74%), Positives = 84/107 (78%), Gaps = 18/107 (16%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MGNDAPLACLS FQPL+Y YFKQLFAQ                  VTNPPIDPFREK+VM
Sbjct: 537 MGNDAPLACLSLFQPLIYSYFKQLFAQ------------------VTNPPIDPFREKIVM 578

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWK 107
           SLMCPIGPEANIL PSAKQCHRLFLPNP+LSLYDLEV+R N HRGWK
Sbjct: 579 SLMCPIGPEANILIPSAKQCHRLFLPNPILSLYDLEVLRNNLHRGWK 625

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

>gi|307187474|gb|EFN72550.1| Glutamate synthase [NADH], amyloplastic [Camponotus floridanus]

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 71/113 (62%), Positives = 84/113 (74%), Gaps = 18/113 (15%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MGNDAPLACLSEFQPLLY+YFKQLFAQ                  VTNPPIDPFREK+VM
Sbjct: 524 MGNDAPLACLSEFQPLLYEYFKQLFAQ------------------VTNPPIDPFREKIVM 565

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSL 113
           S++CPIGPE+NILEP+  Q HRLFLP P+LSL DLE+++  THRGW+   + +
Sbjct: 566 SMLCPIGPESNILEPNEVQVHRLFLPQPILSLSDLEILKRTTHRGWRTKVIDI 618

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

>gi|307210154|gb|EFN86827.1| Putative glutamate synthase [NADPH] [Harpegnathos saltator]

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 71/113 (62%), Positives = 83/113 (73%), Gaps = 18/113 (15%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MGNDAPLACLSEFQPLLY+YFKQLFAQ                  VTNPPIDPFREK+VM
Sbjct: 601 MGNDAPLACLSEFQPLLYEYFKQLFAQ------------------VTNPPIDPFREKIVM 642

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSL 113
           S++CPIGPE+NILEP+  Q HRLFLP P+LSL D EVI+  +HRGW+   + +
Sbjct: 643 SMLCPIGPESNILEPNELQVHRLFLPQPILSLTDFEVIKRTSHRGWRTKVIDI 695

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

>gi|322792674|gb|EFZ16548.1| hypothetical protein SINV_12348 [Solenopsis invicta]

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 72/107 (67%), Positives = 80/107 (74%), Gaps = 18/107 (16%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MGNDAPLACLSEFQPLLY+YFKQLFAQ                  VTNPPIDPFREK+VM
Sbjct: 526 MGNDAPLACLSEFQPLLYEYFKQLFAQ------------------VTNPPIDPFREKIVM 567

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWK 107
           S++CPIGPE NILEPS  Q HRLFLP P+LSL DLEV++  THR W+
Sbjct: 568 SMLCPIGPEGNILEPSELQVHRLFLPQPILSLNDLEVLKHTTHRNWR 614

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332030526|gb|EGI70214.1| Putative glutamate synthase [Acromyrmex echinatior]

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 72/119 (60%), Positives = 85/119 (71%), Gaps = 18/119 (15%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MGNDAPLACLSEFQPLLY+YFKQLFAQ                  VTNPPIDPFREK+VM
Sbjct: 522 MGNDAPLACLSEFQPLLYEYFKQLFAQ------------------VTNPPIDPFREKIVM 563

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSLMADLTN 119
           S++CPIGPE+NILEP+  Q HRLFLP P+LSL DLEV++  THR W+   + +   L +
Sbjct: 564 SMLCPIGPESNILEPNELQVHRLFLPQPILSLSDLEVLKHTTHRNWRTKVIDITYPLED 622

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383865379|ref|XP_003708151.1| PREDICTED: putative glutamate synthase [NADPH]-like isoform 2 [Megachile rotundata]

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 70/107 (65%), Positives = 81/107 (75%), Gaps = 18/107 (16%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MGNDAPLACLS+FQPL+YDYFKQLFAQ                  VTNPPIDPFREK+VM
Sbjct: 524 MGNDAPLACLSQFQPLIYDYFKQLFAQ------------------VTNPPIDPFREKIVM 565

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWK 107
           S++CPIGPE+NILEP+  Q HRLFLP P+LSL DLE+I+   +RGWK
Sbjct: 566 SMLCPIGPESNILEPNELQVHRLFLPQPILSLDDLEIIKRTRYRGWK 612

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

>gi|383865377|ref|XP_003708150.1| PREDICTED: putative glutamate synthase [NADPH]-like isoform 1 [Megachile rotundata]

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 70/107 (65%), Positives = 81/107 (75%), Gaps = 18/107 (16%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MGNDAPLACLS+FQPL+YDYFKQLFAQ                  VTNPPIDPFREK+VM
Sbjct: 524 MGNDAPLACLSQFQPLIYDYFKQLFAQ------------------VTNPPIDPFREKIVM 565

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWK 107
           S++CPIGPE+NILEP+  Q HRLFLP P+LSL DLE+I+   +RGWK
Sbjct: 566 SMLCPIGPESNILEPNELQVHRLFLPQPILSLDDLEIIKRTRYRGWK 612

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

>gi|195440030|ref|XP_002067862.1| GK12671 [Drosophila willistoni] gi|194163947|gb|EDW78848.1| GK12671 [Drosophila willistoni]

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 69/107 (64%), Positives = 82/107 (76%), Gaps = 18/107 (16%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MGNDAPLACLS FQP+ Y+YFKQLFAQ                  VTNPPIDPFREKVVM
Sbjct: 575 MGNDAPLACLSAFQPIPYEYFKQLFAQ------------------VTNPPIDPFREKVVM 616

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWK 107
           S+ CPIGPEAN+LEPSA+Q HR++LPNP+LS+ D ++++ NTHRGWK
Sbjct: 617 SMQCPIGPEANLLEPSAQQVHRIWLPNPILSIPDTQLLKRNTHRGWK 663

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345480329|ref|XP_001605708.2| PREDICTED: putative glutamate synthase [NADPH]-like [Nasonia vitripennis]

 Score =  155 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 71/107 (66%), Positives = 81/107 (75%), Gaps = 18/107 (16%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MGNDAPLACLSEFQPLLY+YFKQLFAQ                  VTNPPIDPFREK+VM
Sbjct: 532 MGNDAPLACLSEFQPLLYEYFKQLFAQ------------------VTNPPIDPFREKIVM 573

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWK 107
           SL+CPIGPE+NILEP+    HRLFL  P+LSL+DLEVI+  ++RGWK
Sbjct: 574 SLLCPIGPESNILEPNEMFVHRLFLEQPILSLHDLEVIKKTSYRGWK 620

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

>gi|328792962|ref|XP_396817.3| PREDICTED: putative glutamate synthase [NADPH]-like isoform 1 [Apis mellifera]

 Score =  154 bits (388), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 70/107 (65%), Positives = 80/107 (74%), Gaps = 18/107 (16%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MGNDAPLACLS+FQPL+YDYFKQLFAQ                  VTNPPIDPFREK+VM
Sbjct: 372 MGNDAPLACLSQFQPLIYDYFKQLFAQ------------------VTNPPIDPFREKIVM 413

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWK 107
           S++CPIGPE+NILEP+  Q HRLFL  P+LSL DLEVI+   +RGWK
Sbjct: 414 SMLCPIGPESNILEPNELQVHRLFLSQPILSLDDLEVIKRTKYRGWK 460

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
FB|FBgn0036663	2114	CG9674 [Drosophila melanogaste	0.586	0.033	0.630	5.4e-31
POMBASE|SPAPB1E7.07	2111	glt1 "glutamate synthase Glt1	0.586	0.033	0.466	7.4e-20
CGD|CAL0000516	2126	GLT1 [Candida albicans (taxid:	0.595	0.033	0.459	3.5e-18
WB|WBGene00012326	2175	W07E11.1 [Caenorhabditis elega	0.669	0.037	0.511	1.7e-17
UNIPROTKB|Q0JKD0	2167	LOC_Os01g48960 "Glutamate synt	0.561	0.031	0.528	3.4e-14
TAIR|locus:2178461	2208	GLT1 "NADH-dependent glutamate	0.561	0.030	0.514	5.7e-14
ASPGD|ASPL0000027159	2126	gltA [Emericella nidulans (tax	0.595	0.033	0.5	8.9e-14
TIGR_CMR|CPS_0761	1535	CPS_0761 "putative glutamate s	0.611	0.048	0.381	7.3e-13
UNIPROTKB|P55037	1550	gltB "Ferredoxin-dependent glu	0.619	0.048	0.346	7.7e-13
UNIPROTKB|P09831	1486	gltB "glutamate synthase, larg	0.611	0.049	0.378	3.7e-12

FB|FBgn0036663 CG9674 [Drosophila melanogaster (taxid:7227)]

 Score = 261 (96.9 bits), Expect = 5.4e-31, Sum P(2) = 5.4e-31
 Identities = 46/73 (63%), Positives = 62/73 (84%)

Query:    42 LSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLN 101
             L  QVTNPPIDPFREKVVMS+ CP+GPEAN+L+PSA+Q HR++L NP+LS+ D ++++ N
Sbjct:   594 LFAQVTNPPIDPFREKVVMSMQCPLGPEANLLQPSAQQVHRIWLTNPILSIPDTQLLKRN 653

Query:   102 THRGW--KVMKVS 112
             THRGW  KV+ ++
Sbjct:   654 THRGWRTKVLDIT 666

GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0016040 "glutamate synthase (NADH) activity" evidence=IEA

GO:0010181 "FMN binding" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0006537 "glutamate biosynthetic process" evidence=IEA

GO:0051536 "iron-sulfur cluster binding" evidence=IEA

POMBASE|SPAPB1E7.07 glt1 "glutamate synthase Glt1 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 177 (67.4 bits), Expect = 7.4e-20, Sum P(2) = 7.4e-20
 Identities = 35/75 (46%), Positives = 47/75 (62%)

Query:    42 LSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLN 101
             L  QVTNPPIDP RE +VMSL C IGP  N+LE +  QC RL +P P+L++ +   ++ N
Sbjct:   581 LFAQVTNPPIDPIREAIVMSLQCYIGPSGNLLEINQSQCRRLRMPTPILTVEEFNALK-N 639

Query:   102 THR---GWKVMKVSL 113
               R    WKV  + +
Sbjct:   640 VDRIYPDWKVASIDI 654

GO:0004355 "glutamate synthase (NADPH) activity" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006537 "glutamate biosynthetic process" evidence=ISO

GO:0006541 "glutamine metabolic process" evidence=IEA

GO:0010181 "FMN binding" evidence=IEA

GO:0016040 "glutamate synthase (NADH) activity" evidence=ISO

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=IEA

CGD|CAL0000516 GLT1 [Candida albicans (taxid:5476)]

 Score = 167 (63.8 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
 Identities = 34/74 (45%), Positives = 48/74 (64%)

Query:    42 LSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIR-L 100
             L  QVTNPPIDP REK+VMSL C +GP+ N+LE    Q +RL L +P+L+  +L  I+ +
Sbjct:   568 LFAQVTNPPIDPIREKIVMSLECYVGPQGNLLEMKPDQLNRLLLKSPILTSSELLAIKNI 627

Query:   101 NT-HRGWKVMKVSL 113
              T +  W V  + +
Sbjct:   628 QTVYPSWSVANIDI 641

GO:0016040 "glutamate synthase (NADH) activity" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006807 "nitrogen compound metabolic process" evidence=IEA

WB|WBGene00012326 W07E11.1 [Caenorhabditis elegans (taxid:6239)]

 Score = 230 (86.0 bits), Expect = 1.7e-17, P = 1.7e-17
 Identities = 43/84 (51%), Positives = 59/84 (70%)

Query:    30 PVLLSVTTMYCSLSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPL 89
             P+L S    +  L  QVTNPPIDPFRE++VMSL CPIGPE+N+LEP  +   RL L  P+
Sbjct:   539 PLLFSY---FQQLFAQVTNPPIDPFREQIVMSLRCPIGPESNMLEPDTELASRLILEQPV 595

Query:    90 LSLYDLEVIRLNTHRGWKVMKVSL 113
             LS+ D+EVI+   ++GWK  ++ +
Sbjct:   596 LSMVDMEVIKRTMYKGWKAKEIDI 619

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006537 "glutamate biosynthetic process" evidence=IEA

GO:0015930 "glutamate synthase activity" evidence=IEA

GO:0016638 "oxidoreductase activity, acting on the CH-NH2 group of donors" evidence=IEA

GO:0016639 "oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0006807 "nitrogen compound metabolic process" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0010181 "FMN binding" evidence=IEA

GO:0016040 "glutamate synthase (NADH) activity" evidence=IEA

GO:0045181 "glutamate synthase activity, NAD(P)H as acceptor" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

UNIPROTKB|Q0JKD0 LOC_Os01g48960 "Glutamate synthase 1 [NADH], chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 199 (75.1 bits), Expect = 3.4e-14, P = 3.4e-14
 Identities = 37/70 (52%), Positives = 52/70 (74%)

Query:    45 QVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHR 104
             QVTNPPIDP REK+V S+ C IGPE ++LE + KQC+RL L  PL+S+ ++E I+   +R
Sbjct:   629 QVTNPPIDPIREKIVTSMECMIGPEGDLLETTEKQCNRLALEGPLVSIDEMEAIKKMNYR 688

Query:   105 GW--KVMKVS 112
             GW  KV+ ++
Sbjct:   689 GWRSKVLDIT 698

GO:0006537 "glutamate biosynthetic process" evidence=IMP

GO:0009536 "plastid" evidence=IDA

GO:0019676 "ammonia assimilation cycle" evidence=IMP

GO:0048589 "developmental growth" evidence=IMP

GO:0060359 "response to ammonium ion" evidence=IEP

TAIR|locus:2178461 GLT1 "NADH-dependent glutamate synthase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 5.7e-14, P = 5.7e-14
 Identities = 36/70 (51%), Positives = 50/70 (71%)

Query:    45 QVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHR 104
             QVTNPPIDP REK+V S+ C IGPE ++ E + +QCHRL L  PLL + ++E I+   +R
Sbjct:   648 QVTNPPIDPIREKIVTSMECMIGPEGDLTETTEEQCHRLSLKGPLLKIEEMEAIKKMNYR 707

Query:   105 GW--KVMKVS 112
             GW  KV+ ++
Sbjct:   708 GWRTKVLDIT 717

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006537 "glutamate biosynthetic process" evidence=IEA;IDA;IMP

GO:0006807 "nitrogen compound metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0010181 "FMN binding" evidence=IEA

GO:0015930 "glutamate synthase activity" evidence=IEA

GO:0016040 "glutamate synthase (NADH) activity" evidence=IEA;IDA;IMP

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016638 "oxidoreductase activity, acting on the CH-NH2 group of donors" evidence=IEA

GO:0016639 "oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0042128 "nitrate assimilation" evidence=TAS

GO:0045181 "glutamate synthase activity, NAD(P)H as acceptor" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0051536 "iron-sulfur cluster binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0019676 "ammonia assimilation cycle" evidence=IMP

GO:0048589 "developmental growth" evidence=IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP;RCA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009536 "plastid" evidence=TAS

ASPGD|ASPL0000027159 gltA [Emericella nidulans (taxid:162425)]

 Score = 195 (73.7 bits), Expect = 8.9e-14, P = 8.9e-14
 Identities = 37/74 (50%), Positives = 50/74 (67%)

Query:    42 LSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIR-L 100
             L  QVTNPPIDP RE VVMSL C +GP+ N+LE    QC RL LP+P+LS+ +   ++ +
Sbjct:   573 LFAQVTNPPIDPIREAVVMSLECYVGPQGNLLEMDPSQCRRLLLPSPILSIPEFNALKNI 632

Query:   101 NT-HRGWKVMKVSL 113
             NT H+ W V  + +
Sbjct:   633 NTVHKDWTVRLIDI 646

GO:0016040 "glutamate synthase (NADH) activity" evidence=ISA;RCA;IMP

GO:0009064 "glutamine family amino acid metabolic process" evidence=IGI;RCA;IMP

GO:0005829 "cytosol" evidence=IEA

GO:0010181 "FMN binding" evidence=IEA

GO:0051536 "iron-sulfur cluster binding" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006537 "glutamate biosynthetic process" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

TIGR_CMR|CPS_0761 CPS_0761 "putative glutamate synthase, ferredoxin-dependent" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 137 (53.3 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
 Identities = 29/76 (38%), Positives = 46/76 (60%)

Query:    42 LSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRL- 100
             L  QVTNPPIDP RE++VMSL   IG   N+L+ + + CH++ +  P+L++  L  ++  
Sbjct:   524 LFAQVTNPPIDPIREELVMSLRGYIGKSFNLLDETPEHCHKVEIEQPVLTIDQLRKLQYI 583

Query:   101 -NTHRGWKVMKVSLMA 115
              N H   K + ++  A
Sbjct:   584 DNNHLQSKTIAITFKA 599

GO:0006537 "glutamate biosynthetic process" evidence=ISS

GO:0016041 "glutamate synthase (ferredoxin) activity" evidence=ISS

GO:0019676 "ammonia assimilation cycle" evidence=ISS

UNIPROTKB|P55037 gltB "Ferredoxin-dependent glutamate synthase 1" [Synechocystis sp. PCC 6803 substr. Kazusa (taxid:1111708)]

 Score = 124 (48.7 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
 Identities = 26/75 (34%), Positives = 42/75 (56%)

Query:    42 LSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLN 101
             L  QVTNPPID  RE+++ S    IG E N+L+P  + C  + L  P+L+  DL  ++  
Sbjct:   543 LFAQVTNPPIDSIREEIITSAETTIGGEGNLLDPRPESCRLIELKTPILTNEDLAKLKAL 602

Query:   102 THRGWKVMKVSLMAD 116
                 +K + + ++ D
Sbjct:   603 DDDEFKSVTLDILFD 617

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|P09831 gltB "glutamate synthase, large subunit" [Escherichia coli K-12 (taxid:83333)]

 Score = 125 (49.1 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
 Identities = 28/74 (37%), Positives = 39/74 (52%)

Query:    45 QVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHR 104
             QVTNPPIDP RE  VMSL   IG E N+   +  Q HRL   +P+L   D + +      
Sbjct:   512 QVTNPPIDPLREAHVMSLATSIGREMNVFCEAEGQAHRLSFKSPILLYSDFKQLTTMKEE 571

Query:   105 GWKVMKVSLMADLT 118
              ++   + +  D+T
Sbjct:   572 HYRADTLDITFDVT 585

GO:0097054 "L-glutamate biosynthetic process" evidence=IEA

GO:0006807 "nitrogen compound metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=IEA

GO:0051536 "iron-sulfur cluster binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006541 "glutamine metabolic process" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0004355 "glutamate synthase (NADPH) activity" evidence=IEA;IDA

GO:0006537 "glutamate biosynthetic process" evidence=IEA;IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	121
pfam04898	288	pfam04898, Glu_syn_central, Glutamate synthase cen	1e-47
PRK11750	1485	PRK11750, gltB, glutamate synthase subunit alpha;	3e-25

>gnl|CDD|218318 pfam04898, Glu_syn_central, Glutamate synthase central domain

 Score =  153 bits (390), Expect = 1e-47
 Identities = 53/108 (49%), Positives = 66/108 (61%), Gaps = 18/108 (16%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MG+D PLA LSE   LLYDYFKQLFAQ                  VTNPPIDP RE++VM
Sbjct: 33  MGDDTPLAVLSEKPRLLYDYFKQLFAQ------------------VTNPPIDPIREEIVM 74

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWKV 108
           SL   +GPE N+LEP+ +Q  RL L +P+LS  +LE ++     G+K 
Sbjct: 75  SLETYLGPEGNLLEPTPEQARRLKLDSPILSNSELEALKNLNEEGFKA 122

The central domain of glutamate synthase connects the amino terminal amidotransferase domain with the FMN-binding domain and has an alpha / beta overall topology. This domain appears to be a rudimentary form of the FMN-binding TIM barrel according to SCOP. Length = 288

>gnl|CDD|236968 PRK11750, gltB, glutamate synthase subunit alpha; Provisional

 Score = 98.8 bits (247), Expect = 3e-25
 Identities = 38/91 (41%), Positives = 47/91 (51%), Gaps = 18/91 (19%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MG+D P+A LS     +YDYF+Q FAQ                  VTNPPIDP RE  VM
Sbjct: 489 MGDDTPMAVLSSQPRSIYDYFRQQFAQ------------------VTNPPIDPLREAHVM 530

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLS 91
           SL   IG E N+   +    HR+   +P+LS
Sbjct: 531 SLATCIGREMNVFCETEGHAHRVIFKSPVLS 561

Length = 1485

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	121
PF04898	287	Glu_syn_central: Glutamate synthase central domain	100.0
KOG0399|consensus	2142		100.0
PRK11750	1485	gltB glutamate synthase subunit alpha; Provisional	100.0

>PF04898 Glu_syn_central: Glutamate synthase central domain; InterPro: IPR006982 Glutamate synthase (GltS)1 is a key enzyme in the early stages of the assimilation of ammonia in bacteria, yeasts, and plants

Probab=100.00  E-value=2.1e-44  Score=296.12  Aligned_cols=100  Identities=50%  Similarity=0.742  Sum_probs=69.6

Q ss_pred             CCCCcccccccCCCCchHHHHHHHhhhhcchhhhhhhccccccccccCCCCCCccccceeeeeeeecCCCcCCCCCCCCc
Q psy12795          1 MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQC   80 (121)
Q Consensus         1 MG~DtPLA~LS~~~~~L~dYFkQ~FA~~~~~~~~~~~~~~~~~~QVTNPPIDpiRE~~VmSl~~~lG~~~nil~~~~~~~   80 (121)
                      ||+||||||||+++++|||||||+||                  ||||||||||||++||||+|+||+++|+|++++++|
T Consensus        32 MG~DtPLAvLS~~~~~l~~YFkQ~FA------------------QVTNPPID~iRE~~vmSl~~~lG~~~n~l~~~~~~~   93 (287)
T PF04898_consen   32 MGDDTPLAVLSEKPQNLFDYFKQLFA------------------QVTNPPIDPIREELVMSLRTYLGPRPNILEETPEHA   93 (287)
T ss_dssp             S---S--CCC-SS---GGGCEEE----------------------SSS----TTTTGGG-B--EEES--S-TTS-SGGGC
T ss_pred             CCCCChhHhhcCCCCcHHHHHHHhhh------------------hccCCCcchhhhhheeecceeeCCCCCCCCCCCCCc
Confidence            99999999999999999999999999                  999999999999999999999999999999999999


Q ss_pred             ceEEcCCcccCHHHHHHHHhccCCCceeEEEEeeEeCC
Q psy12795         81 HRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSLMADLT  118 (121)
Q Consensus        81 ~rL~L~SPVLs~~~l~~i~~~~~~~~~~~~l~~~~~~~  118 (121)
                      ++|+|+||||+++|+++|++...++|++.+++++|++.
T Consensus        94 ~~l~l~sPiL~~~~l~~l~~~~~~~~~~~~l~~~f~~~  131 (287)
T PF04898_consen   94 RRLELDSPILSNGQLEKLRSLDDPGFKAATLDATFPAE  131 (287)
T ss_dssp             -CEEESSSB--HHHHHHHHHH--CCCCEEEEESEEEST
T ss_pred             eEEEecCCEECHHHHHHHHHhhccCCCccEEEEEEECC
Confidence            99999999999999999999877889999999999976

In bacteria, L-glutamate is involved in osmoregulation, is the precursor for other amino acids, and can be the precursor for haem biosynthesis. In plants, GltS is especially essential in the reassimilation of ammonia released by photorespiration. On the basis of the amino acid sequence and the nature of the electron donor, three different classes of GltS can de defined as follows: 1) ferredoxin-dependent GltS (Fd-GltS), 2) NADPH-dependent GltS (NADPH-GltS), and 3) NADH-dependent GltS (properties of the three classes have been reviewed extensively []). The enzyme is a complex iron-sulphur flavoprotein catalysing the reductive transfer of the amido nitrogen from L-glutamine to 2-oxoglutarate to form two molecules of L-glutamate via intramolecular channelling of ammonia from the amidotransferase domain to the FMN-binding domain. Reaction of amidotransferase domain: L-glutamine + H2O = L-glutamate + NH3 Reactions of FMN-binding domain: 2-oxoglutarate + NH3 = 2-iminoglutarate + H2O 2e + FMNox = FMNred 2-iminoglutarate + FMNred = L-glutamate + FMNox The central domain of glutamate synthase connects the N-terminal amidotransferase domain with the FMN-binding domain and has an alpha/beta overall topology [].; GO: 0015930 glutamate synthase activity, 0006807 nitrogen compound metabolic process, 0055114 oxidation-reduction process; PDB: 1EA0_A 2VDC_E 1OFE_A 1LLW_A 1OFD_A 1LLZ_A 1LM1_A.

>KOG0399|consensus

Probab=100.00  E-value=1.2e-38  Score=299.45  Aligned_cols=101  Identities=58%  Similarity=1.024  Sum_probs=98.8

Q ss_pred             CCCCcccccccCCCCchHHHHHHHhhhhcchhhhhhhccccccccccCCCCCCccccceeeeeeeecCCCcCCCCCCCCc
Q psy12795          1 MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQC   80 (121)
Q Consensus         1 MG~DtPLA~LS~~~~~L~dYFkQ~FA~~~~~~~~~~~~~~~~~~QVTNPPIDpiRE~~VmSl~~~lG~~~nil~~~~~~~   80 (121)
                      ||||+||||||++|++|||||||+||                  ||||||||||||.+||||.|+|||++|+||.++++|
T Consensus       568 MGnDaplA~LS~~p~llydYFkQlFA------------------QVTNPpIDPiRE~iVmSLec~IGp~gNllE~~~eq~  629 (2142)
T KOG0399|consen  568 MGNDAPLACLSDRPHLLYDYFKQLFA------------------QVTNPPIDPIREAIVMSLECYIGPEGNLLEPGPEQC  629 (2142)
T ss_pred             cCCCcceehhcCCccHHHHHHHHHHH------------------hccCCCCChhhhhheEEEEeeecCCcCcccCChhHh
Confidence            99999999999999999999999999                  999999999999999999999999999999999999


Q ss_pred             ceEEcCCcccCHHHHHHHHhccCCCceeEEEEeeEeCCC
Q psy12795         81 HRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSLMADLTN  119 (121)
Q Consensus        81 ~rL~L~SPVLs~~~l~~i~~~~~~~~~~~~l~~~~~~~~  119 (121)
                      +|+.|++|||+..||+.|+...+++||++.|+++|+..+
T Consensus       630 ~rl~L~~PvL~~~e~ealk~~~y~~wk~k~iditf~~~~  668 (2142)
T KOG0399|consen  630 SRLILKGPVLNEEEMEALKNDMYPGWKVKEIDITFDKSE  668 (2142)
T ss_pred             ceeeccCCcCCHHHHHHHhcCCCccceeeeeeeeeehhh
Confidence            999999999999999999998899999999999999654

>PRK11750 gltB glutamate synthase subunit alpha; Provisional

Probab=100.00  E-value=1.9e-38  Score=300.58  Aligned_cols=101  Identities=41%  Similarity=0.658  Sum_probs=97.2

Q ss_pred             CCCCcccccccCCCCchHHHHHHHhhhhcchhhhhhhccccccccccCCCCCCccccceeeeeeeecCCCcCCCCCCCCc
Q psy12795          1 MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQC   80 (121)
Q Consensus         1 MG~DtPLA~LS~~~~~L~dYFkQ~FA~~~~~~~~~~~~~~~~~~QVTNPPIDpiRE~~VmSl~~~lG~~~nil~~~~~~~   80 (121)
                      ||+||||||||+++++|||||||+||                  ||||||||||||++||||+|+||+++|+|++++++|
T Consensus       489 MG~D~plAvLS~~~~~l~~yFkQ~FA------------------QVTNPPID~iRE~~vmSl~~~lG~~~n~l~~~~~~~  550 (1485)
T PRK11750        489 MGDDTPMAVLSSQPRSIYDYFRQQFA------------------QVTNPPIDPLREAHVMSLATCIGREMNVFCETEGHA  550 (1485)
T ss_pred             CCCCcchhhhcCCCccHHHHhhhcce------------------eccCCCCchhhhhceeeeeeeeCCCcCcCCCCcccC
Confidence            99999999999999999999999999                  999999999999999999999999999999999999


Q ss_pred             ceEEcCCcccCHHHHHHHHhccCCCceeEEEEeeEeCCC
Q psy12795         81 HRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSLMADLTN  119 (121)
Q Consensus        81 ~rL~L~SPVLs~~~l~~i~~~~~~~~~~~~l~~~~~~~~  119 (121)
                      ++|+|+||||++.|+++|+.....+|++.+++++|++.+
T Consensus       551 ~~l~l~~PiL~~~~~~~l~~~~~~~~~~~~l~~~f~~~~  589 (1485)
T PRK11750        551 HRVIFKSPVLSYSDFKQLTTLDEEHYRADTLDLNYDPEE  589 (1485)
T ss_pred             CeEEeCCceeCHHHHHHHHhccccCCceEEEEEEEeCCh
Confidence            999999999999999999987656799999999998743

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	121
1llw_A	1520	Structural Studies On The Synchronization Of Cataly		2e-17
2vdc_A	1472	The 9.5 A Resolution Structure Of Glutamate Synthas		2e-10
1ea0_A	1479	Alpha Subunit Of A. Brasilense Glutamate Synthase L		2e-10

>pdb|1LLW|A Chain A, Structural Studies On The Synchronization Of Catalytic Centers In Glutamate Synthase: Complex With 2-Oxoglutarate Length = 1520

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/117 (41%), Positives = 64/117 (54%), Gaps = 21/117 (17%)
Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MG+D PLA LS    LLYDYFKQ FAQ                  VTNPPIDP RE +VM
Sbjct: 475 MGDDTPLAVLSHKPRLLYDYFKQRFAQ------------------VTNPPIDPLRENLVM 516
Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSLMADL 117
           SL   +G   N+LEP A+    + L +PL++  +L+ I+       +V +VS + DL
Sbjct: 517 SLAMFLGKRGNLLEPKAESARTIKLRSPLVNEVELQAIKTGQ---LQVAEVSTLYDL 570

>pdb|2VDC|A Chain A, The 9.5 A Resolution Structure Of Glutamate Synthase From Cryo-Electron Microscopy And Its Oligomerization Behavior In Solution: Functional Implications. Length = 1472

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 18/99 (18%)
Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MG+D+P+A LS+    L+ +F+Q F+Q                  VTNPPID  RE+ VM
Sbjct: 479 MGDDSPIAVLSDKYRGLHHFFRQNFSQ------------------VTNPPIDSLRERRVM 520
Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIR 99
           SL   +G   NIL+    Q   L L +P+L+  +   +R
Sbjct: 521 SLKTRLGNLGNILDEDETQTRLLQLESPVLTTAEFRAMR 559

>pdb|1EA0|A Chain A, Alpha Subunit Of A. Brasilense Glutamate Synthase Length = 1479

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 18/99 (18%)
Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MG+D+P+A LS+    L+ +F+Q F+Q                  VTNPPID  RE+ VM
Sbjct: 479 MGDDSPIAVLSDKYRGLHHFFRQNFSQ------------------VTNPPIDSLRERRVM 520
Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIR 99
           SL   +G   NIL+    Q   L L +P+L+  +   +R
Sbjct: 521 SLKTRLGNLGNILDEDETQTRLLQLESPVLTTAEFRAMR 559

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	121
1ea0_A	1479	Glutamate synthase [NADPH] large chain; oxidoreduc	7e-47
1ofd_A	1520	Ferredoxin-dependent glutamate synthase 2; oxidore	3e-46

>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A* Length = 1479

 Score =  159 bits (405), Expect = 7e-47
 Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 20/113 (17%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MG+D+P+A LS+    L+ +F+Q F+Q                  VTNPPID  RE+ VM
Sbjct: 479 MGDDSPIAVLSDKYRGLHHFFRQNFSQ------------------VTNPPIDSLRERRVM 520

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSL 113
           SL   +G   NIL+    Q   L L +P+L+  +   +R   + G    ++  
Sbjct: 521 SLKTRLGNLGNILDEDETQTRLLQLESPVLTTAEFRAMR--DYMGDTAAEIDA 571

>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A* Length = 1520

 Score =  158 bits (401), Expect = 3e-46
 Identities = 47/113 (41%), Positives = 61/113 (53%), Gaps = 21/113 (18%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MG+D PLA LS    LLYDYFKQ FAQ                  VTNPPIDP RE +VM
Sbjct: 475 MGDDTPLAVLSHKPRLLYDYFKQRFAQ------------------VTNPPIDPLRENLVM 516

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSL 113
           SL   +G   N+LEP A+    + L +PL++  +L+ I+       +V +VS 
Sbjct: 517 SLAMFLGKRGNLLEPKAESARTIKLRSPLVNEVELQAIK---TGQLQVAEVST 566

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	121
1ea0_A	1479	Glutamate synthase [NADPH] large chain; oxidoreduc	100.0
1ofd_A	1520	Ferredoxin-dependent glutamate synthase 2; oxidore	100.0

>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*

Probab=100.00  E-value=3.3e-39  Score=304.55  Aligned_cols=98  Identities=37%  Similarity=0.547  Sum_probs=95.7

Q ss_pred             CCCCcccccccCCCCchHHHHHHHhhhhcchhhhhhhccccccccccCCCCCCccccceeeeeeeecCCCcCCCCCCCCc
Q psy12795          1 MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQC   80 (121)
Q Consensus         1 MG~DtPLA~LS~~~~~L~dYFkQ~FA~~~~~~~~~~~~~~~~~~QVTNPPIDpiRE~~VmSl~~~lG~~~nil~~~~~~~   80 (121)
                      ||+||||||||+++++|||||||+||                  ||||||||||||++||||.|+||+++|+|++++++|
T Consensus       479 MG~D~pla~ls~~~~~l~~yFkq~fA------------------qVTNPpiD~iRE~~v~sl~~~~G~~~n~l~~~~~~~  540 (1479)
T 1ea0_A          479 MGDDSPIAVLSDKYRGLHHFFRQNFS------------------QVTNPPIDSLRERRVMSLKTRLGNLGNILDEDETQT  540 (1479)
T ss_dssp             SCCCSCCGGGCSSCCCGGGTEEECCC------------------CSSSCCCCTTTTGGGCCCCEEESCCSCTTCCSGGGS
T ss_pred             CCCCchhhhhcCCCcchHHHHHHHhh------------------hccCCCccchhhhceeeccccccCCcccCCCCccCC
Confidence            99999999999999999999999999                  999999999999999999999999999999999999


Q ss_pred             ceEEcCCcccCHHHHHHHHhccCCCceeEEEEeeEeCC
Q psy12795         81 HRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSLMADLT  118 (121)
Q Consensus        81 ~rL~L~SPVLs~~~l~~i~~~~~~~~~~~~l~~~~~~~  118 (121)
                      ++|+|+||||++.|+++|+++  ++|++.+|+++|+++
T Consensus       541 ~~~~l~~Pil~~~~~~~l~~~--~~~~~~~~~~~~~~~  576 (1479)
T 1ea0_A          541 RLLQLESPVLTTAEFRAMRDY--MGDTAAEIDATFPVD  576 (1479)
T ss_dssp             CSEEESCSBCCHHHHHHHHHH--HGGGEEEEECEEEST
T ss_pred             CEEEeCCCcCCHHHHHHHhcc--CCCceEEEEEEEECC
Confidence            999999999999999999987  379999999999876

>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*

Probab=100.00  E-value=7.1e-39  Score=302.85  Aligned_cols=97  Identities=51%  Similarity=0.786  Sum_probs=94.8

Q ss_pred             CCCCcccccccCCCCchHHHHHHHhhhhcchhhhhhhccccccccccCCCCCCccccceeeeeeeecCCCcCCCCCCCCc
Q psy12795          1 MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQC   80 (121)
Q Consensus         1 MG~DtPLA~LS~~~~~L~dYFkQ~FA~~~~~~~~~~~~~~~~~~QVTNPPIDpiRE~~VmSl~~~lG~~~nil~~~~~~~   80 (121)
                      ||+||||||||+++++|||||||+||                  ||||||||||||++||||.|+||+++|+|++++++|
T Consensus       475 MG~D~plavls~~~~~l~~yFkQ~fA------------------qVTNPpiD~iRE~~v~Sl~~~~G~~~n~l~~~~~~~  536 (1520)
T 1ofd_A          475 MGDDTPLAVLSHKPRLLYDYFKQRFA------------------QVTNPPIDPLRENLVMSLAMFLGKRGNLLEPKAESA  536 (1520)
T ss_dssp             SCCCSCCTTTCSSCCCGGGGEEECCC------------------CSSSCCCCTTTTGGGCBCCEEESCCCCSSSCCGGGG
T ss_pred             CCCCchhhhhcCCCccHHHHHHHhhh------------------hccCCCccchhhhheeeccccccCCCCCCCCCcCCC
Confidence            99999999999999999999999999                  999999999999999999999999999999999999


Q ss_pred             ceEEcCCcccCHHHHHHHHhccCCCceeEEEEeeEeCC
Q psy12795         81 HRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSLMADLT  118 (121)
Q Consensus        81 ~rL~L~SPVLs~~~l~~i~~~~~~~~~~~~l~~~~~~~  118 (121)
                      ++|+|+||||++.|+++|++   ++|++.+|+++|+++
T Consensus       537 ~~~~l~~Pil~~~~~~~~~~---~~~~~~~~~~~~~~~  571 (1520)
T 1ofd_A          537 RTIKLRSPLVNEVELQAIKT---GQLQVAEVSTLYDLD  571 (1520)
T ss_dssp             CEEEESCSBCCHHHHHHHHH---SSSCEEEEECEEECS
T ss_pred             CEEEeCCCccCHHHHHHHhc---CCCceEEEEEEEeCC
Confidence            99999999999999999998   379999999999876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	121
d1ofda2	809	c.1.4.1 (A:431-1239) Alpha subunit of glutamate sy	8e-42
d1ea0a2	771	c.1.4.1 (A:423-1193) Alpha subunit of glutamate sy	3e-41

>d1ofda2 c.1.4.1 (A:431-1239) Alpha subunit of glutamate synthase, central and FMN domains {Synechocystis sp. [TaxId: 1143]} Length = 809

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: Alpha subunit of glutamate synthase, central and FMN domains
species: Synechocystis sp. [TaxId: 1143]

 Score =  143 bits (363), Expect = 8e-42
 Identities = 45/108 (41%), Positives = 59/108 (54%), Gaps = 18/108 (16%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MG+D PLA LS    LLYDYFKQ FAQ                  VTNPPIDP RE +VM
Sbjct: 45  MGDDTPLAVLSHKPRLLYDYFKQRFAQ------------------VTNPPIDPLRENLVM 86

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWKV 108
           SL   +G   N+LEP A+    + L +PL++  +L+ I+    +  +V
Sbjct: 87  SLAMFLGKRGNLLEPKAESARTIKLRSPLVNEVELQAIKTGQLQVAEV 134

>d1ea0a2 c.1.4.1 (A:423-1193) Alpha subunit of glutamate synthase, central and FMN domains {Azospirillum brasilense [TaxId: 192]} Length = 771

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: Alpha subunit of glutamate synthase, central and FMN domains
species: Azospirillum brasilense [TaxId: 192]

 Score =  142 bits (359), Expect = 3e-41
 Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 20/113 (17%)

Query: 1   MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM 60
           MG+D+P+A LS+    L+ +F+Q F+Q                  VTNPPID  RE+ VM
Sbjct: 57  MGDDSPIAVLSDKYRGLHHFFRQNFSQ------------------VTNPPIDSLRERRVM 98

Query: 61  SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSL 113
           SL   +G   NIL+    Q   L L +P+L+  +   +R   + G    ++  
Sbjct: 99  SLKTRLGNLGNILDEDETQTRLLQLESPVLTTAEFRAMR--DYMGDTAAEIDA 149

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	121
d1ea0a2	771	Alpha subunit of glutamate synthase, central and F	100.0
d1ofda2	809	Alpha subunit of glutamate synthase, central and F	100.0

>d1ea0a2 c.1.4.1 (A:423-1193) Alpha subunit of glutamate synthase, central and FMN domains {Azospirillum brasilense [TaxId: 192]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: Alpha subunit of glutamate synthase, central and FMN domains
species: Azospirillum brasilense [TaxId: 192]

Probab=100.00  E-value=2.3e-41  Score=302.33  Aligned_cols=99  Identities=36%  Similarity=0.542  Sum_probs=95.6

Q ss_pred             CCCCcccccccCCCCchHHHHHHHhhhhcchhhhhhhccccccccccCCCCCCccccceeeeeeeecCCCcCCCCCCCCc
Q psy12795          1 MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQC   80 (121)
Q Consensus         1 MG~DtPLA~LS~~~~~L~dYFkQ~FA~~~~~~~~~~~~~~~~~~QVTNPPIDpiRE~~VmSl~~~lG~~~nil~~~~~~~   80 (121)
                      |||||||||||+++|+|||||||+||                  ||||||||||||+.||||+++||+++|||++++++|
T Consensus        57 MG~DtPlAvLS~~~r~l~~YFkQ~FA------------------QVTNPPID~iRE~~VmSl~~~lG~~~Nil~~~~~~~  118 (771)
T d1ea0a2          57 MGDDSPIAVLSDKYRGLHHFFRQNFS------------------QVTNPPIDSLRERRVMSLKTRLGNLGNILDEDETQT  118 (771)
T ss_dssp             SCCCSCCGGGCSSCCCGGGTEEECCC------------------CSSSCCCCTTTTGGGCCCCEEESCCSCTTCCSGGGS
T ss_pred             CCCChhhhhhcCCCCCchhhcccCcc------------------ccCCCCccHHHhhccccccceeCCCCCCCCCCccCC
Confidence            99999999999999999999999999                  999999999999999999999999999999999999


Q ss_pred             ceEEcCCcccCHHHHHHHHhccCCCceeEEEEeeEeCCC
Q psy12795         81 HRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSLMADLTN  119 (121)
Q Consensus        81 ~rL~L~SPVLs~~~l~~i~~~~~~~~~~~~l~~~~~~~~  119 (121)
                      ++|+|+||||++.|+++|++.  .+|++.+|+++|++++
T Consensus       119 ~~l~l~sPILs~~e~~~i~~~--~~~~~~~id~~f~~~~  155 (771)
T d1ea0a2         119 RLLQLESPVLTTAEFRAMRDY--MGDTAAEIDATFPVDG  155 (771)
T ss_dssp             CSEEESCSBCCHHHHHHHHHH--HGGGEEEEECEEESTT
T ss_pred             CEEEeCCCccCHHHHHHHHcc--CCCCeEEEEEEEeCCC
Confidence            999999999999999999975  3589999999999865

>d1ofda2 c.1.4.1 (A:431-1239) Alpha subunit of glutamate synthase, central and FMN domains {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: Alpha subunit of glutamate synthase, central and FMN domains
species: Synechocystis sp. [TaxId: 1143]

Probab=100.00  E-value=4.5e-41  Score=301.65  Aligned_cols=97  Identities=51%  Similarity=0.786  Sum_probs=94.3

Q ss_pred             CCCCcccccccCCCCchHHHHHHHhhhhcchhhhhhhccccccccccCCCCCCccccceeeeeeeecCCCcCCCCCCCCc
Q psy12795          1 MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQC   80 (121)
Q Consensus         1 MG~DtPLA~LS~~~~~L~dYFkQ~FA~~~~~~~~~~~~~~~~~~QVTNPPIDpiRE~~VmSl~~~lG~~~nil~~~~~~~   80 (121)
                      |||||||||||+++|+|||||||+||                  ||||||||||||++||||+|+||+++|||++++++|
T Consensus        45 MG~DtPLAvLS~~~r~l~~YFkQ~FA------------------QVTNPPID~iRE~~VmSl~~~lG~~~Nil~~~~~~~  106 (809)
T d1ofda2          45 MGDDTPLAVLSHKPRLLYDYFKQRFA------------------QVTNPPIDPLRENLVMSLAMFLGKRGNLLEPKAESA  106 (809)
T ss_dssp             SCCCSCCTTTCSSCCCGGGGEEECCC------------------CSSSCCCCTTTTGGGCBCCEEESCCCCSSSCCGGGG
T ss_pred             CCCChHhHhhcCCCCCcchhcccccc------------------cCCCCCccHHHhhccccccceecCCCCCCCCCCCCC
Confidence            99999999999999999999999999                  999999999999999999999999999999999999


Q ss_pred             ceEEcCCcccCHHHHHHHHhccCCCceeEEEEeeEeCC
Q psy12795         81 HRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSLMADLT  118 (121)
Q Consensus        81 ~rL~L~SPVLs~~~l~~i~~~~~~~~~~~~l~~~~~~~  118 (121)
                      ++|+|+||||++.||++|++   .+|++.+++++|+++
T Consensus       107 ~~l~l~sPiLs~~el~~i~~---~~~~~~~i~~~f~~~  141 (809)
T d1ofda2         107 RTIKLRSPLVNEVELQAIKT---GQLQVAEVSTLYDLD  141 (809)
T ss_dssp             CEEEESCSBCCHHHHHHHHH---SSSCEEEEECEEECS
T ss_pred             CeEEECCCccCHHHHHHHHc---CCCceEEEeEEecCC
Confidence            99999999999999999986   358999999999975