Psyllid ID: psy12809

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150---
Protein Sequence
DSDVEYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGRWDKTLNKLQDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDLNGEPRETRVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK
Secondary Structure (PSIPRED)
ccccccccccHHHHHHccccccccEEEEccEEEEEEccccEEEEEEEccccccccccEEEEEEEccccccccccccccccccEEEEcccccEEEEEccccccccccccccEEEEEEEEcccccccEEEEEEccccEEEEEEEccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHHccccEEEEEccEEEEEEEcccEEEEEEEcccccccEEEEEEEEEcccHHHcHcHcccHcccccccccccccEEEEEEEccccEcccccccEEEEEEEEEccccccEEEEEEcccccEEEEEEEccccccccccc
Coil and Loop (DISEMBL)
dsdveyvgpgplefieplfsqkpcsyrlesywtyevchgryvrqfhedreskkEVKLQEYYLGRWDKTLnklqdspegvmgfkkiegiklpyleinmtdgtlcdlngepretRVLYMChstgrhdiyslketstcKYEVIILTSLLCKHPKFK
Flexible Loop (DISEMBL)
dsdveyvgpgplefieplfsqkPCSYRLESYWTYEVCHGRYVRqfhedreskkeVKLQEyylgrwdktlnklqdspegvmGFKKIEGIKLPYLEINMTDGTLCDLNGEPRETRVLYMCHSTGRHDIYSLKETSTCKYEVIILTsllckhpkfk
Low Complexity Region (SEG)
DSDVEYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGRWDKTLNKLQDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDLNGEPRETRVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK
Disordered region (IsUnstruct)
******VGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDR***KEVKLQEYYLGRWDKTLNKLQDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDLNGEPRETRVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCK*****
Disordered Region (DISOPRED)
*********GPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDR***KEVKLQEYYLGRWDK****************KIEGIKLPYLEINMTDGTLCDLNGEPRETRVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK
Disordered Region (DISEMBL)
DSDVEYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGRWDKTLNKLQDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDLNGEPRETRVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK
Disordered Region (DISPRO)
*****YVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGRWDKTLNKL*D***G*M*FK***GIKLPYLEINMTDGTLCDLNGEPRETRVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKH****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
DSDVEYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGRWDKTLNKLQDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDLNGEPRETRVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	153	2.2.26 [Sep-21-2011]
Q08B78	480	Endoplasmic reticulum lec	N/A	N/A	1.0	0.318	0.472	2e-38
Q8VEH8	483	Endoplasmic reticulum lec	yes	N/A	0.973	0.308	0.464	2e-38
Q28IT1	481	Endoplasmic reticulum lec	yes	N/A	0.993	0.316	0.457	4e-38
Q96DZ1	483	Endoplasmic reticulum lec	yes	N/A	0.973	0.308	0.452	1e-36
Q5R8S4	483	Endoplasmic reticulum lec	yes	N/A	0.973	0.308	0.452	1e-36
Q8K2C7	672	Protein OS-9 OS=Mus muscu	no	N/A	0.895	0.203	0.339	1e-14
Q5RKH6	666	Protein OS-9 OS=Rattus no	yes	N/A	0.895	0.205	0.339	5e-14
Q13438	667	Protein OS-9 OS=Homo sapi	no	N/A	0.882	0.202	0.341	1e-13
Q3MHX6	667	Protein OS-9 OS=Bos tauru	no	N/A	0.862	0.197	0.348	1e-13
Q9UTC8	310	Protein OS-9 homolog OS=S	yes	N/A	0.777	0.383	0.325	2e-10

>sp|Q08B78|ERLEC_XENLA Endoplasmic reticulum lectin 1 OS=Xenopus laevis GN=erlec1 PE=2 SV=1

 Score =  157 bits (398), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 77/163 (47%), Positives = 107/163 (65%), Gaps = 10/163 (6%)

Query: 1   DSDVEYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEY 60
           + D EY GP P E ++PLF    CSYR+ESYWTYEVCHG+Y+RQ+HE++E+ +++ +QEY
Sbjct: 87  EEDREYKGPSPGELLDPLFKLSSCSYRIESYWTYEVCHGKYIRQYHEEKEAGQKLNIQEY 146

Query: 61  YLGRWDKT----LNKLQDSPEGVMGF-----KKIEGIKLPYLEINMTDGTLCDL-NGEPR 110
           YLG+  K       + Q+  E   G      K IEG   PY  + MT+GT C L   + R
Sbjct: 147 YLGKTVKKSPSEAGENQEDKERTEGHKDIHTKNIEGQMTPYYPVEMTNGTPCSLKQNQAR 206

Query: 111 ETRVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
            + V+Y+CH   +H+I S+ E +TC+YEV+ILT LLC HPK+K
Sbjct: 207 SSTVMYICHPEAKHEILSVAEITTCEYEVVILTPLLCNHPKYK 249

Probable lectin that binds selectively to improperly folded lumenal proteins. May function in endoplasmic reticulum quality control and endoplasmic reticulum-associated degradation (ERAD) of both non-glycosylated proteins and glycoproteins.
Xenopus laevis (taxid: 8355)

>sp|Q8VEH8|ERLEC_MOUSE Endoplasmic reticulum lectin 1 OS=Mus musculus GN=Erlec1 PE=2 SV=1

 Score =  157 bits (398), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 73/157 (46%), Positives = 103/157 (65%), Gaps = 8/157 (5%)

Query: 5   EYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGR 64
           +Y GP P E +EPLF Q  CSYR+ESYWTYEVCHG+++RQ+HE++E+ ++V + EYYLG 
Sbjct: 94  DYKGPNPRELLEPLFKQSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKVNIHEYYLGN 153

Query: 65  -------WDKTLNKLQDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDL-NGEPRETRVLY 116
                  ++K     ++     +  K IEG   PY  + M +GT C L    PR + V+Y
Sbjct: 154 MLAKNLLYEKEREAKENEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMY 213

Query: 117 MCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
           +CH   +H+I S+ E +TC+YEV+ILT LLC HPK+K
Sbjct: 214 ICHPESKHEILSVAEVTTCEYEVVILTPLLCSHPKYK 250

Probable lectin that binds selectively to improperly folded lumenal proteins. May function in endoplasmic reticulum quality control and endoplasmic reticulum-associated degradation (ERAD) of both non-glycosylated proteins and glycoproteins.

Mus musculus (taxid: 10090)

>sp|Q28IT1|ERLEC_XENTR Endoplasmic reticulum lectin 1 OS=Xenopus tropicalis GN=erlec1 PE=2 SV=1

 Score =  156 bits (395), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 75/164 (45%), Positives = 107/164 (65%), Gaps = 12/164 (7%)

Query: 1   DSDVEYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEY 60
           + D EY GP P   +EPLF    CSYR+ESYWTYEVCHG+Y+RQ+HE++E+ +++ +QEY
Sbjct: 87  EQDGEYKGPSPGALLEPLFKLSSCSYRIESYWTYEVCHGKYIRQYHEEKETGQKLSIQEY 146

Query: 61  YLGRWDKTLN----------KLQDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDL-NGEP 109
           YLG+  K             +  +SP+ +   K IEG   PY  + M +GT C L   +P
Sbjct: 147 YLGKMMKKSTTEAGENQEEKESAESPKEIYT-KNIEGQMTPYYPVEMINGTPCSLKQNQP 205

Query: 110 RETRVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
           R + V+Y+CH   +H+I S+ E +TC+YEV+ILT LLC HPK++
Sbjct: 206 RSSTVMYICHPESKHEILSVAEVTTCEYEVVILTPLLCNHPKYR 249

Probable lectin that binds selectively to improperly folded lumenal proteins. May function in endoplasmic reticulum quality control and endoplasmic reticulum-associated degradation (ERAD) of both non-glycosylated proteins and glycoproteins.

Xenopus tropicalis (taxid: 8364)

>sp|Q96DZ1|ERLEC_HUMAN Endoplasmic reticulum lectin 1 OS=Homo sapiens GN=ERLEC1 PE=1 SV=1

 Score =  152 bits (383), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 71/157 (45%), Positives = 102/157 (64%), Gaps = 8/157 (5%)

Query: 5   EYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGR 64
           +Y GP P E +EPLF Q  CSYR+ESYWTYEVCHG+++RQ+HE++E+ +++ + EYYLG 
Sbjct: 94  DYKGPNPRELLEPLFKQSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIHEYYLGN 153

Query: 65  -------WDKTLNKLQDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDL-NGEPRETRVLY 116
                  ++K     +      +  K IEG   PY  + M +GT C L    PR + V+Y
Sbjct: 154 MLAKNLLFEKEREAEEKEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMY 213

Query: 117 MCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
           +CH   +H+I S+ E +TC+YEV+ILT LLC HPK++
Sbjct: 214 ICHPESKHEILSVAEVTTCEYEVVILTPLLCSHPKYR 250

Probable lectin that binds selectively to improperly folded lumenal proteins. May function in endoplasmic reticulum quality control and endoplasmic reticulum-associated degradation (ERAD) of both non-glycosylated proteins and glycoproteins.

Homo sapiens (taxid: 9606)

>sp|Q5R8S4|ERLEC_PONAB Endoplasmic reticulum lectin 1 OS=Pongo abelii GN=ERLEC1 PE=2 SV=1

 Score =  152 bits (383), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 71/157 (45%), Positives = 102/157 (64%), Gaps = 8/157 (5%)

Query: 5   EYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGR 64
           +Y GP P E +EPLF Q  CSYR+ESYWTYEVCHG+++RQ+HE++E+ +++ + EYYLG 
Sbjct: 94  DYKGPNPRELLEPLFKQSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIHEYYLGN 153

Query: 65  -------WDKTLNKLQDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDL-NGEPRETRVLY 116
                  ++K     +      +  K IEG   PY  + M +GT C L    PR + V+Y
Sbjct: 154 MLAKNLLFEKEREAEEKEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMY 213

Query: 117 MCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
           +CH   +H+I S+ E +TC+YEV+ILT LLC HPK++
Sbjct: 214 ICHPESKHEILSVAEVTTCEYEVVILTPLLCSHPKYR 250

Probable lectin that binds selectively to improperly folded lumenal proteins. May function in endoplasmic reticulum quality control and endoplasmic reticulum-associated degradation (ERAD) of both non-glycosylated proteins and glycoproteins.

Pongo abelii (taxid: 9601)

>sp|Q8K2C7|OS9_MOUSE Protein OS-9 OS=Mus musculus GN=Os9 PE=1 SV=2

 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 16/153 (10%)

Query: 6   YVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFH-EDRESKKEVKLQEYYLGR 64
           Y GPG  E + P+    PC  + + +WTYE C+GR+++Q+H ED E K +V     YLG 
Sbjct: 93  YQGPGIPELLSPM-RDAPCLLKTKDWWTYEFCYGRHIQQYHMEDSEIKGDV----LYLGH 147

Query: 65  WDKTLNKLQDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDLNGEPRETRVLYMCHS---- 120
           +  + N   ++ +      K   +K  Y      +G+ CDLNG+PRE  V ++C      
Sbjct: 148 YQSSFNWDDETAKA----SKQHRLKR-YHSQTYGNGSKCDLNGKPREAEVRFLCDEGAGI 202

Query: 121 TGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
           +G + I  + E  +C Y + I TS LC HP  +
Sbjct: 203 SGDY-IDRVDEPVSCSYVLTIRTSRLCPHPLLR 234

Lectin which functions in endoplasmic reticulum (ER) quality control and ER-associated degradation (ERAD). May bind terminally misfolded non-glycosylated proteins as well as improperly folded glycoproteins, retain them in the ER, and possibly transfer them to the ubiquitination machinery and promote their degradation. Possible targets include TRPV4.

Mus musculus (taxid: 10090)

>sp|Q5RKH6|OS9_RAT Protein OS-9 OS=Rattus norvegicus GN=Os9 PE=1 SV=1

 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 16/153 (10%)

Query: 6   YVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFH-EDRESKKEVKLQEYYLGR 64
           Y GPG  E + P+    PC  + + +WTYE C+GR+++Q+H ED E K +V     YLG 
Sbjct: 93  YQGPGIPELLSPM-RDAPCLLKTKDWWTYEFCYGRHIQQYHMEDSEIKGDV----LYLGY 147

Query: 65  WDKTLNKLQDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDLNGEPRETRVLYMCHS---- 120
           +    N   ++ +      K   +K  Y      +G+ CDLNG+PRE  V ++C      
Sbjct: 148 YQSAFNWDDETAKA----SKQHRLKR-YHSQTYGNGSKCDLNGKPREAEVRFLCDEGAGI 202

Query: 121 TGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
           +G + I  + E  +C Y + I TS LC HP  +
Sbjct: 203 SGDY-IDRVDEPFSCSYVLSIRTSRLCPHPLLR 234

Lectin which functions in endoplasmic reticulum (ER) quality control and ER-associated degradation (ERAD). May bind terminally misfolded non-glycosylated proteins as well as improperly folded glycoproteins, retain them in the ER, and possibly transfer them to the ubiquitination machinery and promote their degradation. Possible targets include TRPV4.

Rattus norvegicus (taxid: 10116)

>sp|Q13438|OS9_HUMAN Protein OS-9 OS=Homo sapiens GN=OS9 PE=1 SV=1

 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 20/155 (12%)

Query: 6   YVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFH-EDRESKKEVKLQEYYLGR 64
           Y GPG  E + P+    PC  + + +WTYE C+GR+++Q+H ED E K EV    YY   
Sbjct: 93  YQGPGIPELLSPM-RDAPCLLKTKDWWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSA 151

Query: 65  --WDKTLNKLQDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDLNGEPRETRVLYMCHS-- 120
             WD    K            K   +K  Y      +G+ CDLNG PRE  V ++C    
Sbjct: 152 FDWDDETAKA----------SKQHRLKR-YHSQTYGNGSKCDLNGRPREAEVRFLCDEGA 200

Query: 121 --TGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
             +G + I  + E  +C Y + I T  LC HP  +
Sbjct: 201 GISGDY-IDRVDEPLSCSYVLTIRTPRLCPHPLLR 234

Lectin which functions in endoplasmic reticulum (ER) quality control and ER-associated degradation (ERAD). May bind terminally misfolded non-glycosylated proteins as well as improperly folded glycoproteins, retain them in the ER, and possibly transfer them to the ubiquitination machinery and promote their degradation. Possible targets include TRPV4.

Homo sapiens (taxid: 9606)

>sp|Q3MHX6|OS9_BOVIN Protein OS-9 OS=Bos taurus GN=OS9 PE=2 SV=1

 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 73/152 (48%), Gaps = 20/152 (13%)

Query: 6   YVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFH-EDRESKKEVKLQEYYLGR 64
           Y GPG  E + P+    PC  + + +WTYE C+GR+++Q+H ED E K EV    YY   
Sbjct: 93  YQGPGIPELLSPM-KDAPCLLKTKDWWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSA 151

Query: 65  --WDKTLNKLQDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDLNGEPRETRVLYMCHS-- 120
             WD    K            K   +K  Y      +G+ CDLNG PRE  V ++C    
Sbjct: 152 FDWDDETAKA----------SKQHRLKR-YHSQTYGNGSKCDLNGRPREAEVRFLCDEGA 200

Query: 121 --TGRHDIYSLKETSTCKYEVIILTSLLCKHP 150
             +G + I  + E  +C Y + I T  LC HP
Sbjct: 201 GISGDY-IDRVDEPLSCSYVLTIRTPRLCPHP 231

Lectin which functions in endoplasmic reticulum (ER) quality control and ER-associated degradation (ERAD). May bind terminally misfolded non-glycosylated proteins as well as improperly folded glycoproteins, retain them in the ER, and possibly transfer them to the ubiquitination machinery and promote their degradation. Possible targets include TRPV4.

Bos taurus (taxid: 9913)

>sp|Q9UTC8|OS9_SCHPO Protein OS-9 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yos9 PE=3 SV=3

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 7/126 (5%)

Query: 31  YWTYEVCHGRYVRQFHEDRE--SKKEVKLQEYYLGRWDKTLNKLQDSPEGVMGFKKIEGI 88
           YWTY+  +G++VRQ+H + +  S K +    Y LG    T  K        +GF  +EG 
Sbjct: 138 YWTYDYVYGQHVRQYHLEPQQGSDKVLANPMYILGTAPNTQTKKNLEENWAIGF--VEGK 195

Query: 89  KLPYLEINMTDGTLCDLNGEPRETRVLYMCHSTGRH-DIYSLKETSTCKYEVIILTSLLC 147
              YL+    +GT+CD+   PR   + Y C +     +I   +E S+C Y + I    LC
Sbjct: 196 A--YLQTTFRNGTMCDITKRPRHVILSYECSTNSDTPEITQYQEVSSCAYSMTIHVPGLC 253

Query: 148 KHPKFK 153
             P FK
Sbjct: 254 SLPAFK 259

Lectin involved in the quality control of the secretory pathway. As a member of the endoplasmic reticulum-associated degradation lumenal (ERAD-L) surveillance system, targets misfolded endoplasmic reticulum lumenal glycoproteins for degradation.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
158288270	500	AGAP009546-PA [Anopheles gambiae str. PE	0.980	0.3	0.597	6e-50
157117229	501	xtp3-transactivated protein b [Aedes aeg	0.986	0.301	0.575	2e-48
157117231	484	xtp3-transactivated protein b [Aedes aeg	0.986	0.311	0.575	3e-48
307188294	496	XTP3-transactivated gene B protein-like	0.960	0.296	0.569	5e-48
307204845	496	XTP3-transactivated gene B protein-like	0.928	0.286	0.539	2e-47
91078056	458	PREDICTED: similar to xtp3-transactivate	0.986	0.329	0.602	3e-47
242014238	529	XTP3-transactivated gene B protein precu	0.960	0.277	0.556	6e-47
170059228	482	XTP3-transactivated gene B protein [Cule	0.980	0.311	0.575	6e-47
332028603	513	Endoplasmic reticulum lectin 1 [Acromyrm	0.960	0.286	0.550	1e-46
322792759	533	hypothetical protein SINV_00602 [Solenop	0.960	0.275	0.544	2e-46

>gi|158288270|ref|XP_310144.4| AGAP009546-PA [Anopheles gambiae str. PEST] gi|157019169|gb|EAA05924.4| AGAP009546-PA [Anopheles gambiae str. PEST]

 Score =  201 bits (512), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 95/159 (59%), Positives = 117/159 (73%), Gaps = 9/159 (5%)

Query: 3   DVEYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYL 62
           DVEY GP PLE +EPLF+   CSYR+ESYW+YEVCHG Y++Q+HE+R  K   KLQEY+L
Sbjct: 76  DVEYSGPSPLELLEPLFTSTTCSYRIESYWSYEVCHGNYIKQYHEERHEKTS-KLQEYFL 134

Query: 63  GRWDKT--------LNKLQDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDLNGEPRETRV 114
           GRWDK           +     E  M +KKIEG  LPYLE+ M  GT+CDLNGEPR T+V
Sbjct: 135 GRWDKQKTEALKARYAQADADKEQQMKYKKIEGFNLPYLELEMDSGTICDLNGEPRVTKV 194

Query: 115 LYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
           LY+C+  G++++YSLKETSTC YEVIILT+ LC HPK+K
Sbjct: 195 LYVCYRFGKNEVYSLKETSTCNYEVIILTAALCTHPKYK 233

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157117229|ref|XP_001652998.1| xtp3-transactivated protein b [Aedes aegypti] gi|108876142|gb|EAT40367.1| AAEL007891-PB, partial [Aedes aegypti]

 Score =  196 bits (499), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 92/160 (57%), Positives = 121/160 (75%), Gaps = 9/160 (5%)

Query: 1   DSDVEYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEY 60
           D +++Y GP P++ + PLF+   CSYR+ESYWTYEVCHG+Y++Q+HE+R  K   KLQEY
Sbjct: 78  DGEIQYSGPSPIDLLVPLFTHS-CSYRIESYWTYEVCHGKYIKQYHEERHEKTS-KLQEY 135

Query: 61  YLGRWDK----TLNKL---QDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDLNGEPRETR 113
           YLG+WDK    TL       D+    M +KKI+G+ LPYLE+ M  GT+CDLNGEPR T+
Sbjct: 136 YLGKWDKEKTVTLKAFYENSDAEGAKMQYKKIDGLNLPYLELEMDSGTVCDLNGEPRVTK 195

Query: 114 VLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
           VLY+C+  G++++YSLKETSTC YE+IILT LLC HPK+K
Sbjct: 196 VLYVCYLHGKNEVYSLKETSTCNYEIIILTPLLCAHPKYK 235

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157117231|ref|XP_001652999.1| xtp3-transactivated protein b [Aedes aegypti] gi|108876143|gb|EAT40368.1| AAEL007891-PA, partial [Aedes aegypti]

 Score =  196 bits (498), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 92/160 (57%), Positives = 121/160 (75%), Gaps = 9/160 (5%)

Query: 1   DSDVEYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEY 60
           D +++Y GP P++ + PLF+   CSYR+ESYWTYEVCHG+Y++Q+HE+R  K   KLQEY
Sbjct: 78  DGEIQYSGPSPIDLLVPLFTHS-CSYRIESYWTYEVCHGKYIKQYHEERHEKTS-KLQEY 135

Query: 61  YLGRWDK----TLNKL---QDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDLNGEPRETR 113
           YLG+WDK    TL       D+    M +KKI+G+ LPYLE+ M  GT+CDLNGEPR T+
Sbjct: 136 YLGKWDKEKTVTLKAFYENSDAEGAKMQYKKIDGLNLPYLELEMDSGTVCDLNGEPRVTK 195

Query: 114 VLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
           VLY+C+  G++++YSLKETSTC YE+IILT LLC HPK+K
Sbjct: 196 VLYVCYLHGKNEVYSLKETSTCNYEIIILTPLLCAHPKYK 235

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307188294|gb|EFN73086.1| XTP3-transactivated gene B protein-like protein [Camponotus floridanus]

 Score =  195 bits (496), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 90/158 (56%), Positives = 116/158 (73%), Gaps = 11/158 (6%)

Query: 6   YVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGRW 65
           Y GP P++ ++P+F+Q  CSYRLESYWTYE+CHGRYVRQ+HEDRE KK +K+QEYYLG  
Sbjct: 82  YNGPNPMQLLQPIFAQNSCSYRLESYWTYELCHGRYVRQYHEDREGKK-IKMQEYYLGTL 140

Query: 66  DKT--------LNKLQDSPEGVMGF--KKIEGIKLPYLEINMTDGTLCDLNGEPRETRVL 115
           DK          N+  + P   +    KKI+GI +PYLEI M DGT+CDLN +PR  RVL
Sbjct: 141 DKAQKLKLLAYYNEQANDPNRKLNIPTKKIDGINMPYLEIEMIDGTMCDLNNKPRIIRVL 200

Query: 116 YMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
           Y+C+  G+HD+YSLKET TC+YE I+L+ +LC HP +K
Sbjct: 201 YVCYKHGKHDVYSLKETMTCEYEAIVLSPVLCNHPDYK 238

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307204845|gb|EFN83403.1| XTP3-transactivated gene B protein-like protein [Harpegnathos saltator]

 Score =  193 bits (490), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 88/163 (53%), Positives = 118/163 (72%), Gaps = 21/163 (12%)

Query: 6   YVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGRW 65
           Y+GP P++ ++P+F+Q  CSYRLESYWTYE+CHGRYVRQ+HEDRE KK +K+QEY+LG  
Sbjct: 82  YIGPNPIQLLQPIFAQNSCSYRLESYWTYELCHGRYVRQYHEDREGKK-IKMQEYFLGTL 140

Query: 66  DKT---------------LNKLQDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDLNGEPR 110
           DK                LN+  + P      KKI+GI +PY+E+ MTDGTLCDLN +PR
Sbjct: 141 DKAQKMKLSTTYDEQAKNLNRKLNVP-----IKKIDGINIPYVEVEMTDGTLCDLNNKPR 195

Query: 111 ETRVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
             +VLY+C+  G+HD+YSLKET +C+YE I+L+ +LC HP +K
Sbjct: 196 SIKVLYICYKHGKHDVYSLKETVSCEYEAIVLSPVLCAHPDYK 238

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91078056|ref|XP_971325.1| PREDICTED: similar to xtp3-transactivated protein b [Tribolium castaneum] gi|270001404|gb|EEZ97851.1| hypothetical protein TcasGA2_TC000223 [Tribolium castaneum]

 Score =  192 bits (489), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 97/161 (60%), Positives = 121/161 (75%), Gaps = 10/161 (6%)

Query: 2   SDVEYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYY 61
           S+ +Y GP  LE I PLF+Q  C+YRLESYWTYEVCHGR++RQ+HEDRE KK VKLQEY 
Sbjct: 68  SEEKYEGPTALEVISPLFTQSSCTYRLESYWTYEVCHGRFIRQYHEDREGKK-VKLQEYT 126

Query: 62  LGRWDKTL--NKLQDSPEG------VMGFKKIEGIKLPYLEINMTDGTLCDLN-GEPRET 112
           LGRWD+ L    L  + E        +  KKI+ + LPY+EI M +GT CDLN  +PRET
Sbjct: 127 LGRWDEKLYEKMLSQAKEAEKDKSIQVPVKKIDNVNLPYVEILMGNGTQCDLNQNKPRET 186

Query: 113 RVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
           RVLY+C+  G+H++YSLKETSTC+YE+IIL+ LLC HPK+K
Sbjct: 187 RVLYVCYIHGKHEVYSLKETSTCQYEIIILSPLLCSHPKYK 227

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242014238|ref|XP_002427798.1| XTP3-transactivated gene B protein precursor, putative [Pediculus humanus corporis] gi|212512267|gb|EEB15060.1| XTP3-transactivated gene B protein precursor, putative [Pediculus humanus corporis]

 Score =  192 bits (487), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 88/158 (55%), Positives = 121/158 (76%), Gaps = 11/158 (6%)

Query: 5   EYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGR 64
           +Y GP PL+ +  LF Q  CS+RLE+YWTYE+CHG+Y+RQ+HE+RE K  VKLQEYYLG 
Sbjct: 81  KYFGPNPLDLLSVLFKQSSCSHRLEAYWTYELCHGKYIRQYHEEREGKT-VKLQEYYLGM 139

Query: 65  WDKT---------LNKLQDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDLNGEPRETRVL 115
           WD T          +++  S + V   KKI+G+ +PYL++NM+DGTLCDLN +PR+T+VL
Sbjct: 140 WDATRQQNLRQQLADEISKSTDHV-PIKKIDGLNMPYLQLNMSDGTLCDLNSKPRQTKVL 198

Query: 116 YMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
           Y+C+  G+H+IYSLKETS C+YE+I+L+ LLC HPK++
Sbjct: 199 YICYIHGKHEIYSLKETSICEYEIIVLSPLLCDHPKYR 236

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170059228|ref|XP_001865271.1| XTP3-transactivated gene B protein [Culex quinquefasciatus] gi|167878099|gb|EDS41482.1| XTP3-transactivated gene B protein [Culex quinquefasciatus]

 Score =  191 bits (486), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 92/160 (57%), Positives = 121/160 (75%), Gaps = 10/160 (6%)

Query: 2   SDVEYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYY 61
           S  +Y GP PL+ + PLF+   CSYR+ESYWTYEVCHG+Y++Q+HE+R  K   KLQEYY
Sbjct: 79  SAWQYNGPSPLDLLMPLFNHATCSYRIESYWTYEVCHGKYIKQYHEERHEKTS-KLQEYY 137

Query: 62  LGRWDK--TLN------KLQDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDLNGEPRETR 113
           LG+WDK  T N      K  D+ +  + +KKI+G+ LPYLE+ M  GT+CDLNGEPR T+
Sbjct: 138 LGKWDKQKTANLKARFEKDSDASDK-LKYKKIDGLNLPYLELEMDSGTVCDLNGEPRMTK 196

Query: 114 VLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
           VLY+C+  G++++YSLKETSTC YE+IILT +LC HPK+K
Sbjct: 197 VLYVCYLHGKNEVYSLKETSTCNYEIIILTPMLCAHPKYK 236

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332028603|gb|EGI68640.1| Endoplasmic reticulum lectin 1 [Acromyrmex echinatior]

 Score =  191 bits (484), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 87/158 (55%), Positives = 117/158 (74%), Gaps = 11/158 (6%)

Query: 6   YVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGRW 65
           Y GP P++ ++P+F+Q  CSYRLESYWTYE+CHGRYVRQ+HEDRE KK +K+QEYYLG  
Sbjct: 83  YDGPNPIQLLQPIFAQNSCSYRLESYWTYELCHGRYVRQYHEDREGKK-IKMQEYYLGTL 141

Query: 66  DKT--------LNKLQDSPEGVM--GFKKIEGIKLPYLEINMTDGTLCDLNGEPRETRVL 115
           DK          ++   +P   +    KKI+GI +PY+EI MTDGT+CDLN +PR  +VL
Sbjct: 142 DKAQRTKLSAYYDEQAKNPNRKLYIPIKKIDGINMPYVEIEMTDGTMCDLNNKPRTVKVL 201

Query: 116 YMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
           Y+C+  G+HD+YSLKET +C+YE I+L+ +LC HP +K
Sbjct: 202 YVCYKHGKHDVYSLKETMSCEYEAIVLSPVLCNHPDYK 239

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322792759|gb|EFZ16592.1| hypothetical protein SINV_00602 [Solenopsis invicta]

 Score =  190 bits (482), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 86/158 (54%), Positives = 117/158 (74%), Gaps = 11/158 (6%)

Query: 6   YVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGRW 65
           Y GP P++ ++P+F+Q  CSYRLESYWTYE+CHG+YVRQ+HEDRE KK +K+QEYYLG  
Sbjct: 120 YDGPNPIQLLQPIFAQNSCSYRLESYWTYELCHGKYVRQYHEDREGKK-IKMQEYYLGTL 178

Query: 66  DKT--------LNKLQDSPEGVMGF--KKIEGIKLPYLEINMTDGTLCDLNGEPRETRVL 115
           DK          ++   +P   +    KKI+GI +PY+EI M+DGT+CDLN +PR  RVL
Sbjct: 179 DKAQKMKLSAYYDEQAKNPNRKLNIPIKKIDGINMPYVEIEMSDGTMCDLNNKPRTVRVL 238

Query: 116 YMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
           Y+C+  G+HD+YSLKET +C+YE I+L+ +LC HP +K
Sbjct: 239 YVCYKHGKHDVYSLKETMSCEYEAIVLSPVLCNHPDYK 276

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
UNIPROTKB|Q08B78	480	erlec1 "Endoplasmic reticulum	1.0	0.318	0.472	3.7e-39
MGI|MGI:1914003	483	Erlec1 "endoplasmic reticulum	1.0	0.316	0.453	3.7e-39
UNIPROTKB|F1SQJ5	483	ERLEC1 "Uncharacterized protei	1.0	0.316	0.478	4.8e-39
UNIPROTKB|F1MGK3	429	ERLEC1 "Uncharacterized protei	1.0	0.356	0.478	4.8e-39
UNIPROTKB|Q28IT1	481	erlec1 "Endoplasmic reticulum	0.993	0.316	0.463	1.6e-38
UNIPROTKB|Q5R8S4	483	ERLEC1 "Endoplasmic reticulum	1.0	0.316	0.459	2.1e-38
UNIPROTKB|Q96DZ1	483	ERLEC1 "Endoplasmic reticulum	1.0	0.316	0.459	2.1e-38
UNIPROTKB|F1NCV8	483	F1NCV8 "Uncharacterized protei	1.0	0.316	0.472	7e-38
TAIR|locus:2150361	282	OS9 "AT5G35080" [Arabidopsis t	0.869	0.471	0.370	4.4e-20
MGI|MGI:1924301	672	Os9 "amplified in osteosarcoma	0.882	0.200	0.348	8.4e-17

UNIPROTKB|Q08B78 erlec1 "Endoplasmic reticulum lectin 1" [Xenopus laevis (taxid:8355)]

 Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
 Identities = 77/163 (47%), Positives = 107/163 (65%)

Query:     1 DSDVEYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEY 60
             + D EY GP P E ++PLF    CSYR+ESYWTYEVCHG+Y+RQ+HE++E+ +++ +QEY
Sbjct:    87 EEDREYKGPSPGELLDPLFKLSSCSYRIESYWTYEVCHGKYIRQYHEEKEAGQKLNIQEY 146

Query:    61 YLGRWDKT----LNKLQDSPEGVMGFK-----KIEGIKLPYLEINMTDGTLCDLN-GEPR 110
             YLG+  K       + Q+  E   G K      IEG   PY  + MT+GT C L   + R
Sbjct:   147 YLGKTVKKSPSEAGENQEDKERTEGHKDIHTKNIEGQMTPYYPVEMTNGTPCSLKQNQAR 206

Query:   111 ETRVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
              + V+Y+CH   +H+I S+ E +TC+YEV+ILT LLC HPK+K
Sbjct:   207 SSTVMYICHPEAKHEILSVAEITTCEYEVVILTPLLCNHPKYK 249

GO:0001948 "glycoprotein binding" evidence=ISS

GO:0005788 "endoplasmic reticulum lumen" evidence=ISS

GO:0030433 "ER-associated protein catabolic process" evidence=ISS

MGI|MGI:1914003 Erlec1 "endoplasmic reticulum lectin 1" [Mus musculus (taxid:10090)]

 Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
 Identities = 73/161 (45%), Positives = 105/161 (65%)

Query:     1 DSDVEYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEY 60
             + + +Y GP P E +EPLF Q  CSYR+ESYWTYEVCHG+++RQ+HE++E+ ++V + EY
Sbjct:    90 EEEKDYKGPNPRELLEPLFKQSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKVNIHEY 149

Query:    61 YLGR-------WDKTLNKLQDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDLN-GEPRET 112
             YLG        ++K     ++     +  K IEG   PY  + M +GT C L    PR +
Sbjct:   150 YLGNMLAKNLLYEKEREAKENEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSS 209

Query:   113 RVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
              V+Y+CH   +H+I S+ E +TC+YEV+ILT LLC HPK+K
Sbjct:   210 TVMYICHPESKHEILSVAEVTTCEYEVVILTPLLCSHPKYK 250

GO:0001948 "glycoprotein binding" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005788 "endoplasmic reticulum lumen" evidence=ISO

GO:0030433 "ER-associated protein catabolic process" evidence=ISO

UNIPROTKB|F1SQJ5 ERLEC1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
 Identities = 77/161 (47%), Positives = 106/161 (65%)

Query:     1 DSDVEYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEY 60
             + + +Y GP P E +EPLF Q  CSYR+ESYWTYEVCHG+++RQ+HE++ES ++V + EY
Sbjct:    90 EEEKDYKGPNPRELLEPLFKQSSCSYRIESYWTYEVCHGKHIRQYHEEKESGQKVNIHEY 149

Query:    61 YLGRW-DKTL--NKLQDSPEGVMG----FKKIEGIKLPYLEINMTDGTLCDLN-GEPRET 112
             YLG    K L   K Q++ E         K IEG   PY  + M +GT C L    PR +
Sbjct:   150 YLGNMMAKNLLSEKEQEAEEKEKSKEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSS 209

Query:   113 RVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
              V+Y+CH   +H+I S+ E +TC+YEV+ILT LLC HPK++
Sbjct:   210 TVMYICHPESKHEILSVAEVTTCEYEVVILTPLLCNHPKYR 250

GO:0030433 "ER-associated protein catabolic process" evidence=IEA

GO:0005788 "endoplasmic reticulum lumen" evidence=IEA

GO:0001948 "glycoprotein binding" evidence=IEA

UNIPROTKB|F1MGK3 ERLEC1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
 Identities = 77/161 (47%), Positives = 106/161 (65%)

Query:     1 DSDVEYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEY 60
             + + +Y GP P E +EPLF Q  CSYR+ESYWTYEVCHG++VRQ+HE++ES +++ + EY
Sbjct:    90 EEEKDYKGPNPRELLEPLFKQSSCSYRIESYWTYEVCHGKHVRQYHEEKESGQKINIHEY 149

Query:    61 YLGRW-DKTL--NKLQDSPEGVMG----FKKIEGIKLPYLEINMTDGTLCDLN-GEPRET 112
             YLG    K L   K Q++ E         K IEG   PY  + M +GT C L    PR +
Sbjct:   150 YLGNMLAKNLLSEKEQEAKEEEKSKEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSS 209

Query:   113 RVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
              V+Y+CH   +H+I S+ E +TC+YEV+ILT LLC HPK++
Sbjct:   210 TVMYICHPESKHEILSVAEVTTCEYEVVILTPLLCNHPKYR 250

GO:0030433 "ER-associated protein catabolic process" evidence=IEA

GO:0005788 "endoplasmic reticulum lumen" evidence=IEA

GO:0001948 "glycoprotein binding" evidence=IEA

UNIPROTKB|Q28IT1 erlec1 "Endoplasmic reticulum lectin 1" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 76/164 (46%), Positives = 109/164 (66%)

Query:     1 DSDVEYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEY 60
             + D EY GP P   +EPLF    CSYR+ESYWTYEVCHG+Y+RQ+HE++E+ +++ +QEY
Sbjct:    87 EQDGEYKGPSPGALLEPLFKLSSCSYRIESYWTYEVCHGKYIRQYHEEKETGQKLSIQEY 146

Query:    61 YLGRWDKTL------NKLQ----DSPEGVMGFKKIEGIKLPYLEINMTDGTLCDLN-GEP 109
             YLG+  K        N+ +    +SP+ +   K IEG   PY  + M +GT C L   +P
Sbjct:   147 YLGKMMKKSTTEAGENQEEKESAESPKEIYT-KNIEGQMTPYYPVEMINGTPCSLKQNQP 205

Query:   110 RETRVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
             R + V+Y+CH   +H+I S+ E +TC+YEV+ILT LLC HPK++
Sbjct:   206 RSSTVMYICHPESKHEILSVAEVTTCEYEVVILTPLLCNHPKYR 249

GO:0001948 "glycoprotein binding" evidence=ISS

GO:0005788 "endoplasmic reticulum lumen" evidence=ISS

GO:0030433 "ER-associated protein catabolic process" evidence=ISS

UNIPROTKB|Q5R8S4 ERLEC1 "Endoplasmic reticulum lectin 1" [Pongo abelii (taxid:9601)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 74/161 (45%), Positives = 107/161 (66%)

Query:     1 DSDVEYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEY 60
             + + +Y GP P E +EPLF Q  CSYR+ESYWTYEVCHG+++RQ+HE++E+ +++ + EY
Sbjct:    90 EEEKDYKGPNPRELLEPLFKQSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIHEY 149

Query:    61 YLGRW-DKTL--NKLQDSPE----GVMGFKKIEGIKLPYLEINMTDGTLCDLN-GEPRET 112
             YLG    K L   K +++ E      +  K IEG   PY  + M +GT C L    PR +
Sbjct:   150 YLGNMLAKNLLFEKEREAEEKEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSS 209

Query:   113 RVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
              V+Y+CH   +H+I S+ E +TC+YEV+ILT LLC HPK++
Sbjct:   210 TVMYICHPESKHEILSVAEVTTCEYEVVILTPLLCSHPKYR 250

GO:0001948 "glycoprotein binding" evidence=ISS

GO:0005788 "endoplasmic reticulum lumen" evidence=ISS

GO:0030433 "ER-associated protein catabolic process" evidence=ISS

UNIPROTKB|Q96DZ1 ERLEC1 "Endoplasmic reticulum lectin 1" [Homo sapiens (taxid:9606)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 74/161 (45%), Positives = 107/161 (66%)

Query:     1 DSDVEYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEY 60
             + + +Y GP P E +EPLF Q  CSYR+ESYWTYEVCHG+++RQ+HE++E+ +++ + EY
Sbjct:    90 EEEKDYKGPNPRELLEPLFKQSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIHEY 149

Query:    61 YLGRW-DKTL--NKLQDSPE----GVMGFKKIEGIKLPYLEINMTDGTLCDLN-GEPRET 112
             YLG    K L   K +++ E      +  K IEG   PY  + M +GT C L    PR +
Sbjct:   150 YLGNMLAKNLLFEKEREAEEKEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSS 209

Query:   113 RVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
              V+Y+CH   +H+I S+ E +TC+YEV+ILT LLC HPK++
Sbjct:   210 TVMYICHPESKHEILSVAEVTTCEYEVVILTPLLCSHPKYR 250

GO:0005515 "protein binding" evidence=IPI

GO:0001948 "glycoprotein binding" evidence=IDA

GO:0005788 "endoplasmic reticulum lumen" evidence=IDA

GO:0030433 "ER-associated protein catabolic process" evidence=IDA

UNIPROTKB|F1NCV8 F1NCV8 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
 Identities = 77/163 (47%), Positives = 109/163 (66%)

Query:     1 DSDVEYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEY 60
             + + +Y GP P E +EPLF Q  CSYR+ESYWTYEVCHGR++RQ+HE++E+ +++ +QEY
Sbjct:    88 EEEKDYRGPAPGELLEPLFKQSSCSYRIESYWTYEVCHGRHIRQYHEEKETGQKINIQEY 147

Query:    61 YLGRWD-KT-LNKL----QDSP-EGVMGF--KKIEGIKLPYLEINMTDGTLCDLNGE-PR 110
             YLG    KT L++     ++ P E       K IEG   PY  + M +GT C L    PR
Sbjct:   148 YLGNMMMKTPLSEPDQEEKEKPKESAKEIPTKNIEGQMTPYYPVEMGNGTPCSLRQNLPR 207

Query:   111 ETRVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK 153
              + V+Y+CH   +H+I S+ E +TC+YEV+ILT LLC HPK++
Sbjct:   208 SSTVMYICHPEAKHEILSVAEVTTCEYEVVILTPLLCNHPKYR 250

GO:0001948 "glycoprotein binding" evidence=IEA

GO:0005788 "endoplasmic reticulum lumen" evidence=IEA

GO:0030433 "ER-associated protein catabolic process" evidence=IEA

TAIR|locus:2150361 OS9 "AT5G35080" [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 53/143 (37%), Positives = 80/143 (55%)

Query:    11 PLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGRWDKTLN 70
             P E ++PL S+K C +R E +W+YE CH +YVRQ H + E+K    +QE++LG +D    
Sbjct:   111 PDELLQPL-SEK-CLFRQEGWWSYEFCHQKYVRQLHVEDENKI---VQEFFLGTFDPEAT 165

Query:    71 KLQDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDLNGEPRETRVLYMCHSTGRHDIYSLK 130
                +     +     +  +  +  +  T+GT CDL G PRE  V ++C  T R  + S+ 
Sbjct:   166 AAFNQ---TVSDASTDASQRYHSHV-YTNGTTCDLTGSPREVEVRFVCAET-RAMVTSIT 220

Query:   131 ETSTCKYEVIILTSLLCKHPKFK 153
             E STCKY + +    LCKHP F+
Sbjct:   221 ELSTCKYALTVQCPTLCKHPLFQ 243

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0009651 "response to salt stress" evidence=IMP

GO:0030433 "ER-associated protein catabolic process" evidence=IGI;IMP

GO:0006457 "protein folding" evidence=RCA

GO:0009408 "response to heat" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0030244 "cellulose biosynthetic process" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

MGI|MGI:1924301 Os9 "amplified in osteosarcoma" [Mus musculus (taxid:10090)]

 Score = 217 (81.4 bits), Expect = 8.4e-17, P = 8.4e-17
 Identities = 52/149 (34%), Positives = 77/149 (51%)

Query:     6 YVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFH-EDRESKKEVKLQEYYLGR 64
             Y GPG  E + P+    PC  + + +WTYE C+GR+++Q+H ED E K +V     YLG 
Sbjct:    93 YQGPGIPELLSPM-RDAPCLLKTKDWWTYEFCYGRHIQQYHMEDSEIKGDV----LYLGH 147

Query:    65 WDKTLNKLQDSPEGVMGFKKIEGIKLPYLEINMTDGTLCDLNGEPRETRVLYMC-HSTGR 123
             +  + N   ++ +      K   +K  Y      +G+ CDLNG+PRE  V ++C    G 
Sbjct:   148 YQSSFNWDDETAKA----SKQHRLKR-YHSQTYGNGSKCDLNGKPREAEVRFLCDEGAGI 202

Query:   124 HDIY--SLKETSTCKYEVIILTSLLCKHP 150
                Y   + E  +C Y + I TS LC HP
Sbjct:   203 SGDYIDRVDEPVSCSYVLTIRTSRLCPHP 231

GO:0001948 "glycoprotein binding" evidence=ISO

GO:0002020 "protease binding" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005788 "endoplasmic reticulum lumen" evidence=ISO

GO:0006605 "protein targeting" evidence=ISO

GO:0006621 "protein retention in ER lumen" evidence=ISO

GO:0016567 "protein ubiquitination" evidence=ISO

GO:0030433 "ER-associated protein catabolic process" evidence=ISO

GO:0034976 "response to endoplasmic reticulum stress" evidence=ISO

GO:0042787 "protein ubiquitination involved in ubiquitin-dependent protein catabolic process" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	153
pfam07915	73	pfam07915, PRKCSH, Glucosidase II beta subunit-lik	9e-15

>gnl|CDD|219639 pfam07915, PRKCSH, Glucosidase II beta subunit-like protein

 Score = 64.5 bits (157), Expect = 9e-15
 Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 7/80 (8%)

Query: 24  CSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGRWDKTLNKLQDSPEGVMGFK 83
           C Y  E  WTYE C G+ VRQFHE R+         Y LGR+                  
Sbjct: 1   CFYLDEGEWTYEFCFGKKVRQFHESRKECC----SSYSLGRFKSWAESTVSKWT---KTD 53

Query: 84  KIEGIKLPYLEINMTDGTLC 103
           + E     Y+ +   +GT C
Sbjct: 54  RDENGVQRYISMIYGNGTKC 73

The sequences found in this family are similar to a region found in the beta-subunit of glucosidase II, which is also known as protein kinase C substrate 80K-H (PRKCSH). The enzyme catalyzes the sequential removal of two alpha-1,3-linked glucose residues in the second step of N-linked oligosaccharide processing. The beta subunit is required for the solubility and stability of the heterodimeric enzyme, and is involved in retaining the enzyme within the endoplasmic reticulum. Mutations in the gene coding for PRKCSH have been found to be involved in the development of autosomal dominant polycystic liver disease (ADPLD), but the precise role the protein has in the pathogenesis of this disease is unknown. This family also includes an ER sensor for misfolded glycoproteins and is therefore likely to be a generic sugar binding domain. Length = 73

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	153
KOG3394|consensus	502		100.0
PF13015	154	PRKCSH_1: Glucosidase II beta subunit-like protein	99.95
KOG2397|consensus	480		99.85
PF07915	81	PRKCSH: Glucosidase II beta subunit-like protein;	99.84
KOG3394|consensus	502		99.01
PF02157	278	Man-6-P_recep: Mannose-6-phosphate receptor; PDB:	98.2
KOG4504|consensus	370		97.05
PF09451	268	ATG27: Autophagy-related protein 27; InterPro: IPR	95.87

>KOG3394|consensus

Probab=100.00  E-value=1.9e-40  Score=280.75  Aligned_cols=148  Identities=40%  Similarity=0.765  Sum_probs=124.9

Q ss_pred             CCCCCCCCChHHHhhhhcCCCCceeecCCeEEEEEecCCeeEEeecCCCCCceecccceEEeeecCccccccCCCCCCcc
Q psy12809          2 SDVEYVGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGRWDKTLNKLQDSPEGVMG   81 (153)
Q Consensus         2 ~~~~~~~~~~~~ll~~l~~~~~C~~~~~g~WtYe~C~~~~v~Qfh~~~~~g~~~~~~~~~LG~~~~~~~~~~~~~~~~~~   81 (153)
                      +...+.+|.|.+||++|++...|+++..+|||||||||++|||||.++..+++++.++++||.|.+........    ..
T Consensus        87 ~~~~~k~~~g~eLl~pl~~~~~C~~r~~~yWtYe~ChG~hVrQyH~E~~~~~~i~~qe~yLg~~~~~~~~~~ke----~~  162 (502)
T KOG3394|consen   87 ETKDLKEPQGDELLQPLYNDKLCLYRGEGYWTYEYCHGQHVRQYHEEPETKTGIVNQEFYLGNFLGKFTASLKE----RE  162 (502)
T ss_pred             chhhhcCCChhhhhhhhhhcchheeeccceEEEEeeCCeeeeeeeccccccCcceeeeeeeeeccccchhhhhh----hh
Confidence            34556789999999999976569999999999999999999999999986666788999999998765433210    00


Q ss_pred             ceeecCcccceEEEEcCCCcccCCCCCCcEEEEEEEecC-CCCcceEEeeecCceEEEEEEeccccCCCCCCC
Q psy12809         82 FKKIEGIKLPYLEINMTDGTLCDLNGEPRETRVLYMCHS-TGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK  153 (153)
Q Consensus        82 ~~~~~~~~~~y~~~~y~~G~~Cd~tg~~R~t~V~~~C~~-~~~~~I~~V~E~~tC~Y~i~v~tP~lC~~p~f~  153 (153)
                      .....+...+|+++.|+|||+||+||.||+|+|||.|.+ ..++.|.||+|+++|+|+|+|.+|.||+||+||
T Consensus       163 ~~~~~~~~~~Y~s~ty~nGT~CDltg~PR~~~VrYvC~~~~~~~~I~sV~EvssC~Ye~~I~tp~LC~hP~~~  235 (502)
T KOG3394|consen  163 AEASTDDRKPYHSETYGNGTMCDLTGRPRMVEVRYVCDESSGKHYITSVTEVSSCVYEATILTPTLCSHPLFQ  235 (502)
T ss_pred             hhhhhccccceeEEEecCCCccccCCCCceEEEEEEeCCCCCcceEEEEeeccceeEEEEEecccccCccccc
Confidence            011112467899999999999999999999999999998 556999999999999999999999999999996

>PF13015 PRKCSH_1: Glucosidase II beta subunit-like protein

Probab=99.95  E-value=1.5e-27  Score=178.00  Aligned_cols=104  Identities=27%  Similarity=0.415  Sum_probs=92.7

Q ss_pred             CCCChHHHhhhhcCCCCceeecCCeEEEEEecCCeeEEeecCCCCCceecccceEEeeecCccccccCCCCCCccceeec
Q psy12809          7 VGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGRWDKTLNKLQDSPEGVMGFKKIE   86 (153)
Q Consensus         7 ~~~~~~~ll~~l~~~~~C~~~~~g~WtYe~C~~~~v~Qfh~~~~~g~~~~~~~~~LG~~~~~~~~~~~~~~~~~~~~~~~   86 (153)
                      ...+|.+++++|  .+.|+....|.|+|++|++++|+|   +     .+     .||+|..+.                 
T Consensus        28 ~dyG~d~~f~~l--~~~c~~~~~~~Y~Y~~c~f~~v~Q---~-----~~-----~lG~~~~~~-----------------   75 (154)
T PF13015_consen   28 KDYGPDDEFRAL--KGQCFEKKIGEYTYELCPFGNVTQ---D-----ST-----SLGSFKGWE-----------------   75 (154)
T ss_pred             cccCcHHHHHHh--CCeEEEeecCcEEEEEEECCCeee---c-----cc-----cceeeccce-----------------
Confidence            456899999999  568999999999999999999999   1     11     799998652                 


Q ss_pred             CcccceEEEEcCCCcccCCCCCCcEEEEEEEecCCCCcceEEeeecCceEEEEEEeccccCCCC
Q psy12809         87 GIKLPYLEINMTDGTLCDLNGEPRETRVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHP  150 (153)
Q Consensus        87 ~~~~~y~~~~y~~G~~Cd~tg~~R~t~V~~~C~~~~~~~I~~V~E~~tC~Y~i~v~tP~lC~~p  150 (153)
                           +..+.|+||+.|| +|++|+|+|.+.|++.  +.|++|.||++|+|.|++.||++|..+
T Consensus        76 -----~~~m~y~~G~~Cw-nGp~Rst~V~l~Cg~~--~~l~sV~Ep~~C~Y~~~~~TP~aC~~~  131 (154)
T PF13015_consen   76 -----GSKMKYENGDKCW-NGPQRSTTVHLECGEE--NKLVSVSEPSKCEYVMEFETPAACDPS  131 (154)
T ss_pred             -----eeEEEECCCcccC-CCCCcCEEEEEECCCc--ceEEEecCCCceEEEEEEeeCcccCCh
Confidence                 5678999999999 9999999999999995  799999999999999999999999654

>KOG2397|consensus

Probab=99.85  E-value=1.2e-21  Score=165.68  Aligned_cols=106  Identities=28%  Similarity=0.418  Sum_probs=90.0

Q ss_pred             CCCChHHHhhhhcCCCCceeecCCeEEEEEecCCeeEEeecCCCCCceecccceEEeeecCccccccCCCCCCccceeec
Q psy12809          7 VGPGPLEFIEPLFSQKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGRWDKTLNKLQDSPEGVMGFKKIE   86 (153)
Q Consensus         7 ~~~~~~~ll~~l~~~~~C~~~~~g~WtYe~C~~~~v~Qfh~~~~~g~~~~~~~~~LG~~~~~~~~~~~~~~~~~~~~~~~   86 (153)
                      ...| ...++.+  +++|+.+..|-|+|.+|+++.++|...             +.|.|...                  
T Consensus       369 ~~~g-~~e~~~~--~~~c~~~~~~~Y~Y~~c~~~~~tq~~~-------------~~~~w~~~------------------  414 (480)
T KOG2397|consen  369 GDFG-LLEFAAL--KGQCFDRELGEYTYTVCPFKPVTQKSI-------------YGGSWSGP------------------  414 (480)
T ss_pred             cccc-HHHHHHH--hcceeeeccCcEEEEEccccccccccc-------------ccccccCC------------------
Confidence            4556 6677887  679999999999999999999999442             45555432                  


Q ss_pred             CcccceEEEEcCCCcccCCCCCCcEEEEEEEecCCCCcceEEeeecCceEEEEEEeccccCCCCCCC
Q psy12809         87 GIKLPYLEINMTDGTLCDLNGEPRETRVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK  153 (153)
Q Consensus        87 ~~~~~y~~~~y~~G~~Cd~tg~~R~t~V~~~C~~~~~~~I~~V~E~~tC~Y~i~v~tP~lC~~p~f~  153 (153)
                        ..  .+|.|+||+.|| ||+.|++.|.+.|+..  ++|++|+||+.|.|.|.+.||++|..+.++
T Consensus       415 --e~--~~m~y~nG~~CW-nGP~RSa~v~v~Cg~e--~~i~sv~Ep~kCeY~~~~~tPaaC~~~~~~  474 (480)
T KOG2397|consen  415 --EG--SVMKYENGQQCW-NGPNRSATVTVRCGLE--NEIVSVTEPSKCEYLFELVTPAACNEDFLK  474 (480)
T ss_pred             --cc--ceeeecCccccc-cCCCcceeEEEEeccc--ceeeeccccccceeeeEecccccCCcchhh
Confidence              11  579999999999 9999999999999995  899999999999999999999999987653

>PF07915 PRKCSH: Glucosidase II beta subunit-like protein; InterPro: IPR012913 The sequences found in this family are similar to a region found in the beta-subunit of glucosidase II (P14314 from SWISSPROT), which is also known as protein kinase C substrate 80K-H (PRKCSH)

Probab=99.84  E-value=1.2e-21  Score=131.23  Aligned_cols=79  Identities=38%  Similarity=0.676  Sum_probs=44.3

Q ss_pred             CCceeecCCeEEEEEecCCeeEEeecCCCCCceecccceEEeeecCccccccCCC--CCCccceeecCcccceEEEEcCC
Q psy12809         22 KPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGRWDKTLNKLQDSP--EGVMGFKKIEGIKLPYLEINMTD   99 (153)
Q Consensus        22 ~~C~~~~~g~WtYe~C~~~~v~Qfh~~~~~g~~~~~~~~~LG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~y~~~~y~~   99 (153)
                      +.|+++..|||||||||+++|+|||.+   +++....+++||+|+......+...  ....+.....+...+|+++.|+|
T Consensus         1 ~~C~~~~~g~WtYe~C~g~~v~QfH~~---~~~~~~~~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~y~~   77 (81)
T PF07915_consen    1 GQCLYRSEGWWTYEFCYGKHVRQFHEE---EKDKPGQEYSLGRFDNESHFSWRDSNVDSSPPTRKSEDGSQRYISQVYSN   77 (81)
T ss_dssp             --EEEEEETTEEEEEETTTEEEEE-EE---TTEE-S--EEEEEE--EEEEEEE----------S-------EEEEEEEEE
T ss_pred             CcceecCCCEEEEEECCCCcEEEeccc---CCCCCcceEEeeeEecccchhhhccccccCccccccccCCccEEEEEeCC
Confidence            479999999999999999999999994   2345678999999965333222111  01111222334467899999999


Q ss_pred             Cccc
Q psy12809        100 GTLC  103 (153)
Q Consensus       100 G~~C  103 (153)
                      ||+|
T Consensus        78 Gt~C   81 (81)
T PF07915_consen   78 GTIC   81 (81)
T ss_dssp             -SB-
T ss_pred             CcCC
Confidence            9999

The enzyme catalyses the sequential removal of two alpha-1,3-linked glucose residues in the second step of N-linked oligosaccharide processing []. The beta subunit is required for the solubility and stability of the heterodimeric enzyme, and is involved in retaining the enzyme within the endoplasmic reticulum []. Mutations in the gene coding for PRKCSH have been found to be involved in the development of autosomal dominant polycystic liver disease (ADPLD), but the precise role the protein has in the pathogenesis of this disease is unknown []. ; PDB: 3AIH_A.

>KOG3394|consensus

Probab=99.01  E-value=4.2e-11  Score=102.63  Aligned_cols=133  Identities=17%  Similarity=0.192  Sum_probs=95.9

Q ss_pred             HHhhhhcCCCCceeecCCeEEEEEecCC-eeEEeecCCCCCceecccceEEeeecCccccccCC-CCCCccce-eecCcc
Q psy12809         13 EFIEPLFSQKPCSYRLESYWTYEVCHGR-YVRQFHEDRESKKEVKLQEYYLGRWDKTLNKLQDS-PEGVMGFK-KIEGIK   89 (153)
Q Consensus        13 ~ll~~l~~~~~C~~~~~g~WtYe~C~~~-~v~Qfh~~~~~g~~~~~~~~~LG~~~~~~~~~~~~-~~~~~~~~-~~~~~~   89 (153)
                      ++++.+.+...|+..+.|||.|++|++. ++.|||.+.+++    ..+.+||.|.......+.. +..+.... ......
T Consensus       338 ~~~~~~~~~~~~l~~g~~~~~~ef~~~~~~~~qyhe~~ds~----~~e~~i~~~~~e~~~el~~~~s~~~~a~~~~~~~~  413 (502)
T KOG3394|consen  338 EVIEDVEGGTTCLKGGIGWRKYEFCYGEDHVNQYHEEIDSE----EAEIIIQEYLIELDIELLKKNSKRIAAAKALGNTT  413 (502)
T ss_pred             chHHHHhccceeccCCcceeccceeeccchhheeeeecccc----chhhhhhhhhhcccHHHHhccChhHHHHHHhhccc
Confidence            4555556667899999999999999998 999999997532    3566788887655443321 10000000 000112


Q ss_pred             cceEEEEcCCCcccCCCCCCcEEEEEEEecCCC--Ccce-EEeeecCceEEEEEEeccccCCC
Q psy12809         90 LPYLEINMTDGTLCDLNGEPRETRVLYMCHSTG--RHDI-YSLKETSTCKYEVIILTSLLCKH  149 (153)
Q Consensus        90 ~~y~~~~y~~G~~Cd~tg~~R~t~V~~~C~~~~--~~~I-~~V~E~~tC~Y~i~v~tP~lC~~  149 (153)
                      ..-+.+.+++|++|...+.+|++.|...|.+..  .+.+ +...||.+|.|++.+.+|.+|.+
T Consensus       414 ~~~i~~~~~k~~~~~~~~~~~~v~v~lk~~~s~~~~~~v~~y~l~~~~~~~il~~~~~~i~~~  476 (502)
T KOG3394|consen  414 VSSIEHEEEKENHELQPNVDREVAVKLKLKPSLNSDNAVPQYNLEPMSCQYILGVESRDICEL  476 (502)
T ss_pred             cccHHHHhhcCChhccCCCCceeeeeccCCCCCCCcccchhhhcccccceeeecccCCchhhh
Confidence            233678899999999999999999999998863  2233 45789999999999999999975

>PF02157 Man-6-P_recep: Mannose-6-phosphate receptor; PDB: 2RLB_A 3K42_A 2RL9_A 3K43_A 1C39_A 1M6P_A 3CY4_A 1KEO_B 2RL7_D 2RL8_B

Probab=98.20  E-value=1.9e-05  Score=63.86  Aligned_cols=114  Identities=20%  Similarity=0.348  Sum_probs=70.3

Q ss_pred             HHhhhhcCCCCceeec--CCeEEEEE--ec--CC-----eeEEeecCCCCCceecccceEEeeecCccccccCCCCCCcc
Q psy12809         13 EFIEPLFSQKPCSYRL--ESYWTYEV--CH--GR-----YVRQFHEDRESKKEVKLQEYYLGRWDKTLNKLQDSPEGVMG   81 (153)
Q Consensus        13 ~ll~~l~~~~~C~~~~--~g~WtYe~--C~--~~-----~v~Qfh~~~~~g~~~~~~~~~LG~~~~~~~~~~~~~~~~~~   81 (153)
                      ..|+||+++..+....  ..-|+|.|  |-  ++     -+.|+.+..  ++.     ++||.++..-.           
T Consensus        51 ~~l~pl~~~~f~~~~~~g~d~ytY~f~vC~~v~~~ss~~G~vq~d~~t--~K~-----~vIG~~n~T~v-----------  112 (278)
T PF02157_consen   51 KRLEPLFNKSFESTVGQGSDNYTYIFRVCRDVGNNSSGAGLVQIDKKT--GKY-----TVIGRYNSTPV-----------  112 (278)
T ss_dssp             HHTGGGTT-EEEEEESSTTSEEEEEEESSS--SSSSSTEEEEEEETTT--TEE-----EEEEEEEEEEE-----------
T ss_pred             HhcccccCCceEeeecccCcceEEEEEEeccCCCCCCcceEEEecCCC--Cce-----EEEEeeeeeEE-----------
Confidence            4677776554443332  35677765  76  22     467766543  333     48999975321           


Q ss_pred             ceeecCcccceEEEEcCCCcccCCC--CCCcEEEEEEEecCCCC-cceEE----eeecCceEEEEEEeccccCCC
Q psy12809         82 FKKIEGIKLPYLEINMTDGTLCDLN--GEPRETRVLYMCHSTGR-HDIYS----LKETSTCKYEVIILTSLLCKH  149 (153)
Q Consensus        82 ~~~~~~~~~~y~~~~y~~G~~Cd~t--g~~R~t~V~~~C~~~~~-~~I~~----V~E~~tC~Y~i~v~tP~lC~~  149 (153)
                         ..  ...-+.+.|.+|+.++-.  ..+|++.|.|.|.++.. ..+..    +..+.-|.|.+++.++.+|..
T Consensus       113 ---f~--G~kwvmltY~gGd~yd~~~~~~~Rka~i~~tCdrd~~~~~~~~vse~~g~~~~C~Y~FEv~S~~AC~~  182 (278)
T PF02157_consen  113 ---FR--GSKWVMLTYKGGDKYDSHCGKERRKAIIMFTCDRDTLAGNFTVVSEFVGKPNDCFYFFEVRSSHACPP  182 (278)
T ss_dssp             ---EE--ESSEEEEEEEEEEB-SSSGGG-BEEEEEEEEE-TT-SSEEEEEEEEEETSSSEEEEEEEEEEGGG---
T ss_pred             ---ec--CceEEEEEcCCCCccCCccccccceeEEEEEEcCCCCccccceeeeecCCccceEEEEEecchhcCcC
Confidence               11  234567889999998854  56799999999999742 23333    444899999999999999963

...

>KOG4504|consensus

Probab=97.05  E-value=0.0025  Score=52.39  Aligned_cols=58  Identities=17%  Similarity=0.300  Sum_probs=50.5

Q ss_pred             ceEEEEcCCCcccCCCCCCc-EEEEEEEecCCC--Cc-ceEEeeecCceEEEEEEeccccCC
Q psy12809         91 PYLEINMTDGTLCDLNGEPR-ETRVLYMCHSTG--RH-DIYSLKETSTCKYEVIILTSLLCK  148 (153)
Q Consensus        91 ~y~~~~y~~G~~Cd~tg~~R-~t~V~~~C~~~~--~~-~I~~V~E~~tC~Y~i~v~tP~lC~  148 (153)
                      +-+.++|.||..|.-....| .|-+.|.|.++.  ++ .|..+---.+|.|-+.++|+.+|.
T Consensus       164 k~L~l~y~nGS~CP~~~~~~~~TlisFvC~~e~~~~~~~i~y~gnl~~Ct~FFew~tihACp  225 (370)
T KOG4504|consen  164 KRLQLVYKNGSPCPSKSGLSYKTLISFVCRPEAGPTNRPILYSGNLQTCTLFFEWHTIHACP  225 (370)
T ss_pred             ceEEEEecCCCcCCCCCCccceeeEEEEecCCCCCCCccEEEeccccceEEEEEecccccCc
Confidence            34899999999999655556 899999999984  34 789999999999999999999996

>PF09451 ATG27: Autophagy-related protein 27; InterPro: IPR018939 Autophagy is a degradative transport pathway that delivers cytosolic proteins to the lysosome (vacuole) [] and is induced by starvation []

Probab=95.87  E-value=0.029  Score=45.34  Aligned_cols=55  Identities=11%  Similarity=0.128  Sum_probs=44.4

Q ss_pred             cceEEEEcCCCcccCCCCCCcEEEEEEEecCCCC-cceEEeeecCceEEEEEEeccccC
Q psy12809         90 LPYLEINMTDGTLCDLNGEPRETRVLYMCHSTGR-HDIYSLKETSTCKYEVIILTSLLC  147 (153)
Q Consensus        90 ~~y~~~~y~~G~~Cd~tg~~R~t~V~~~C~~~~~-~~I~~V~E~~tC~Y~i~v~tP~lC  147 (153)
                      ...+.+.|.+  .++ ...+|.++|.|.|+++.. ..+....+...|.|.+.+.+|.+|
T Consensus       116 ~~Gl~l~l~G--~~~-~~~~~~a~i~f~Cd~~~~~~~~~~~~~~~~~~l~l~~~t~~aC  171 (268)
T PF09451_consen  116 KEGLRLKLKG--GKW-GSNNQSAVIEFQCDKNASGPEGTSKVDWDGCVLRLEWKTKYAC  171 (268)
T ss_pred             CCCEEEEEeC--CCC-CCceEEEEEEEEcCCCCCCCceeeeecCCCcEEEEEEeccccc
Confidence            3457777777  566 688999999999999754 445554788899999999999999

Cytosolic proteins appear inside the vacuole enclosed in autophagic vesicles. Autophagy significantly differs from other transport pathways by using double membrane layered transport intermediates, called autophagosomes [, ]. The breakdown of vesicular transport intermediates is a unique feature of autophagy []. Autophagy can also function in the elimination of invading bacteria and antigens []. There are more than 25 AuTophaGy-related (ATG) genes that are essential for autophagy, although it is still not known how the autophagosome is made. Atg9 is a potential membrane carrier to deliver lipids that are used to form the vesicle. Atg27 is another transmembrane protein, and is a cycling protein []. It acts as an effector of VPS34 phosphatidylinositol 3-phosphate kinase signalling and regulates the cytoplasm to vacuole transport (Cvt) vesicle formation. It is also required for autophagy-dependent cycling of ATG9.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	153
3aih_A	124	Human Os-9 Mrh Domain Complexed With Alpha3,Alpha6-		1e-10

>pdb|3AIH|A Chain A, Human Os-9 Mrh Domain Complexed With Alpha3,Alpha6-Man5 Length = 124

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Query: 23  PCSYRLESYWTYEVCHGRYVRQFH-EDRESKKEVKLQEYYLGRWDKTLNKLQDSPEGVMG 81
           PC  + + +WTYE C+GR+++Q+H ED E K EV    YY   +D      + S +  + 
Sbjct: 4   PCLLKTKDWWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLK 63
Query: 82  FKKIEGIKLPYLEINMTDGTLCDLNGEPRETRVLYMCHS----TGRHDIYSLKETSTCKY 137
                     Y      +G+ CDLNG PRE  V ++C      +G + I  + E  +C Y
Sbjct: 64  ---------RYHSQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDY-IDRVDEPLSCSY 113
Query: 138 EVIILTSLLC 147
            + I T  LC
Sbjct: 114 VLTIRTPRLC 123

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	153
3aih_A	124	Protein OS-9; beta barrel, lectin, sugar binding p	2e-29
2kva_A	148	Cation-independent mannose-6-phosphate receptor; t	7e-05
2l2g_A	151	IGF2R domain 11; insulin-like growth factor 2, man	6e-04

>3aih_A Protein OS-9; beta barrel, lectin, sugar binding protein; HET: BMA MAN; 2.10A {Homo sapiens} Length = 124

 Score =  103 bits (257), Expect = 2e-29
 Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 11/128 (8%)

Query: 23  PCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGRWDKTLNKLQDSPEGVMGF 82
           PC  + + +WTYE C+GR+++Q+H +    K    +  YLG +    +   ++ +     
Sbjct: 4   PCLLKTKDWWTYEFCYGRHIQQYHMEDSEIKG---EVLYLGYYQSAFDWDDETAKASKQH 60

Query: 83  KKIEGIKLPYLEINMTDGTLCDLNGEPRETRVLYMCH---STGRHDIYSLKETSTCKYEV 139
           +        Y      +G+ CDLNG PRE  V ++C          I  + E  +C Y +
Sbjct: 61  R-----LKRYHSQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVL 115

Query: 140 IILTSLLC 147
            I T  LC
Sbjct: 116 TIRTPRLC 123

>2kva_A Cation-independent mannose-6-phosphate receptor; transport, lysosome, sugar binding, glyco membrane, phosphoprotein, transmembrane, disulfide bond; NMR {Bos taurus} PDB: 2kvb_A Length = 148

 Score = 39.7 bits (92), Expect = 7e-05
 Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 1/56 (1%)

Query: 93  LEINMTDGTLC-DLNGEPRETRVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLC 147
           +++   DGT   +    PR T + ++C           +E     Y     TS  C
Sbjct: 92  IQLTYRDGTPYNNEKRTPRATLITFLCDRDAGVGFPEYQEEDNSTYNFRWYTSYAC 147

>2l2g_A IGF2R domain 11; insulin-like growth factor 2, mannose 6 phosphate receptor, imprinting, protein evolution, signaling protein; NMR {Monodelphis domestica} Length = 151

 Score = 37.0 bits (85), Expect = 6e-04
 Identities = 11/63 (17%), Positives = 23/63 (36%), Gaps = 4/63 (6%)

Query: 93  LEINMTDGTLCD-LNGEPRETRVLYMCH---STGRHDIYSLKETSTCKYEVIILTSLLCK 148
           L++   DG  C   N    ++ + ++C          ++   +  TC       T L C+
Sbjct: 81  LQLVYDDGAPCPSKNALKYKSVISFVCTHDSGANNKPVFVSLDKQTCTLYFSWHTPLACE 140

Query: 149 HPK 151
             +
Sbjct: 141 KEE 143

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	153
3aih_A	124	Protein OS-9; beta barrel, lectin, sugar binding p	100.0
2rl8_A	154	Cation-dependent mannose-6-phosphate receptor; P-t	99.35
1gp0_A	143	Cation-independent mannose-6-phosphate receptor; i	99.12
2kva_A	148	Cation-independent mannose-6-phosphate receptor; t	98.9
2l2g_A	151	IGF2R domain 11; insulin-like growth factor 2, man	98.69
2lla_A	140	Mannose-6-phosphate/insulin-like growth factor II;	98.66
2l21_A	154	Cation-independent mannose-6-phosphate receptor; g	98.62
1q25_A	432	CI, cation-independent mannose 6-phosphate recepto	98.27
2v5o_A	627	Cation-independent mannose-6-phosphate receptor; m	97.95
1q25_A	432	CI, cation-independent mannose 6-phosphate recepto	97.66
2v5o_A	627	Cation-independent mannose-6-phosphate receptor; m	97.6

>3aih_A Protein OS-9; beta barrel, lectin, sugar binding protein; HET: BMA MAN; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.3e-37  Score=223.82  Aligned_cols=120  Identities=32%  Similarity=0.657  Sum_probs=92.8

Q ss_pred             CCCceeecCCeEEEEEecCCeeEEeecCCCCCceecccceEEeeecCccccccCCCCCCccceeecCcccceEEEEcCCC
Q psy12809         21 QKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGRWDKTLNKLQDSPEGVMGFKKIEGIKLPYLEINMTDG  100 (153)
Q Consensus        21 ~~~C~~~~~g~WtYe~C~~~~v~Qfh~~~~~g~~~~~~~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~y~~G  100 (153)
                      ++.|+++..|||+|||||+++|+|||.+..   .+...+++||+|++...  |.....+.  .. .....+|++|.|+||
T Consensus         2 ~~~C~~~~~g~wtYe~C~~k~v~Q~h~~~~---~~~~~~~~LG~~~~~~~--~~~~~~~~--~~-~~~~~~y~~~~y~~G   73 (124)
T 3aih_A            2 SAPCLLKTKDWWTYEFCYGRHIQQYHMEDS---EIKGEVLYLGYYQSAFD--WDDETAKA--SK-QHRLKRYHSQTYGNG   73 (124)
T ss_dssp             --CCEEEEETTEEEEEETTTEEEEECEETT---EECSCCEEEEEEEEEEE--EEC--------------CEEEEEEEECC
T ss_pred             CCcceEcCCCEEEEEECCCCeEEEecccCC---CCCCCEEECcccccccc--cccccccc--cc-ccccceeEEEEcCCC
Confidence            368999999999999999999999998753   23356789999987311  11000000  00 012357999999999


Q ss_pred             cccCCCCCCcEEEEEEEecCC---CCcceEEeeecCceEEEEEEeccccCC
Q psy12809        101 TLCDLNGEPRETRVLYMCHST---GRHDIYSLKETSTCKYEVIILTSLLCK  148 (153)
Q Consensus       101 ~~Cd~tg~~R~t~V~~~C~~~---~~~~I~~V~E~~tC~Y~i~v~tP~lC~  148 (153)
                      +.||+||++|+|+|+|.|+++   ..+.|++|.||++|+|.|+|.||+||+
T Consensus        74 ~~Cd~~g~~Rst~V~~~C~~~~~~~~~~i~~v~E~~~C~Y~~~v~tP~~C~  124 (124)
T 3aih_A           74 SKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCP  124 (124)
T ss_dssp             SBCTTTSCBCEEEEEEEECTTCCSSCCEEEEEEEEETTEEEEEEEEGGGCC
T ss_pred             CccCCCCCCcEEEEEEEeCCCCCCCccEEEEEcCCCceEEEEEEEecccCC
Confidence            999889999999999999986   258999999999999999999999995

>2rl8_A Cation-dependent mannose-6-phosphate receptor; P-type lectin, lectin, glycop lysosome, membrane, transmembrane, transport; HET: NAG M6D; 1.45A {Bos taurus} SCOP: b.64.1.1 PDB: 1keo_A* 2rl7_A* 2rl6_A* 2rl9_A* 2rlb_A* 3cy4_A* 3k41_A* 3k43_A* 3k42_A* 1m6p_A* 1c39_A*

Probab=99.35  E-value=7.8e-12  Score=92.39  Aligned_cols=111  Identities=21%  Similarity=0.352  Sum_probs=78.7

Q ss_pred             HHhhhhcCCCCceee----cCCeEEEEEecCCe---------eEEeecCCCCCceecccceEEeeecCccccccCCCCCC
Q psy12809         13 EFIEPLFSQKPCSYR----LESYWTYEVCHGRY---------VRQFHEDRESKKEVKLQEYYLGRWDKTLNKLQDSPEGV   79 (153)
Q Consensus        13 ~ll~~l~~~~~C~~~----~~g~WtYe~C~~~~---------v~Qfh~~~~~g~~~~~~~~~LG~~~~~~~~~~~~~~~~   79 (153)
                      .-|.||.  ++|+..    ..+-|+|.||.-+.         +-|.-+..   +    ...+||.+.....         
T Consensus        24 ~~L~pL~--~~~f~~~~~~~~~~Y~Y~~nVCg~~~~~~~~ag~cQ~~~~~---~----~~~~iG~~~~~~~---------   85 (154)
T 2rl8_A           24 KRLTPLF--QKSFESTVGQSPDMYSYVFRVCREAGQHSSGAGLVQIQKSN---G----KETVVGRFNETQI---------   85 (154)
T ss_dssp             HHTGGGT--TCCEECCCC---CCEEEEECSSSCCSSSSSCEEEEEEETTT---C----CEEEEEEEEEEEE---------
T ss_pred             ecccccc--CCeeEEeeccCCCceEEEEEEecCCCCCCCCccEEEEecCC---C----ceEEeeeccceEE---------
Confidence            3577774  578874    24999999999777         77766542   1    1247999976421         


Q ss_pred             ccceeecCcccceEEEEcCCCcccCC--CCCCcEEEEEEEecCCCC-cceEEeeec----CceEEEEEEeccccCC
Q psy12809         80 MGFKKIEGIKLPYLEINMTDGTLCDL--NGEPRETRVLYMCHSTGR-HDIYSLKET----STCKYEVIILTSLLCK  148 (153)
Q Consensus        80 ~~~~~~~~~~~~y~~~~y~~G~~Cd~--tg~~R~t~V~~~C~~~~~-~~I~~V~E~----~tC~Y~i~v~tP~lC~  148 (153)
                           .++  ..-+.+.|.+|+.|+-  ++.+|+|.|.|.|++... .....|.|+    +.|.|.|++.||.+|.
T Consensus        86 -----~~g--~d~i~L~Y~~G~~~~s~c~~~~Rst~I~f~Cd~~~~~~~~~~v~E~~~~~~~C~Y~F~~~T~~ACP  154 (154)
T 2rl8_A           86 -----FQG--SNWIMLIYKGGDEYDNHCGREQRRAVVMISCNRHTLADNFNPVSEERGKVQDCFYLFEMDSSLACS  154 (154)
T ss_dssp             -----EEC--SSEEEEEEEECCBCSSSGGGCBCCEEEEEEECTTCSSEEEEEEEEECCSSSCCEEEEEEEEGGGCC
T ss_pred             -----EcC--CceEEEEECCCcccccccCCCcceEEEEEEeCCCCCCCccEEEecccCccCceEEEEEEecCccCC
Confidence                 111  1137789999999541  688999999999998632 234456654    8999999999999995

>1gp0_A Cation-independent mannose-6-phosphate receptor; insulin-like growth factor, transport, beta barrel; 1.4A {Homo sapiens} SCOP: b.64.1.1 PDB: 1e6f_A 1gp3_A 1gqb_A 2cnj_D 2l29_A 2l2a_A

Probab=99.12  E-value=1.6e-10  Score=83.86  Aligned_cols=59  Identities=19%  Similarity=0.392  Sum_probs=50.5

Q ss_pred             ceEEEEcCCCcccCC-CCCCcEEEEEEEecCCC--CcceEEeeec-CceEEEEEEeccccCCC
Q psy12809         91 PYLEINMTDGTLCDL-NGEPRETRVLYMCHSTG--RHDIYSLKET-STCKYEVIILTSLLCKH  149 (153)
Q Consensus        91 ~y~~~~y~~G~~Cd~-tg~~R~t~V~~~C~~~~--~~~I~~V~E~-~tC~Y~i~v~tP~lC~~  149 (153)
                      .++.+.|.+|+.|+- .|.+|+|.|.|.|+++.  ...++.|.|+ ..|.|.|.+.||.+|..
T Consensus        79 ~~l~L~Y~~G~~C~~~~g~~rst~I~f~C~~~~~~~~~~~~v~~~~~~C~Y~f~~~T~~AC~~  141 (143)
T 1gp0_A           79 QVLQLVYKDGSPCPSKSGLSYKSVISFVCRPEAGPTNRPMLISLDKQTCTLFFSWHTPLACEQ  141 (143)
T ss_dssp             TEEEEEECCCSBCSSSTTCBCEEEEEEEECSSCCSSCCCEEEEEETTTTEEEEEEEEGGGCC-
T ss_pred             CEEEEEECCCCcCCCCCCceeEEEEEEEeCCCCCCCCCCEEeecCCCCcEEEEEEeecccCCC
Confidence            578999999999994 38899999999999874  2567889985 68999999999999975

>2kva_A Cation-independent mannose-6-phosphate receptor; transport, lysosome, sugar binding, glyco membrane, phosphoprotein, transmembrane, disulfide bond; NMR {Bos taurus} PDB: 2kvb_A

Probab=98.90  E-value=1.7e-08  Score=73.18  Aligned_cols=56  Identities=23%  Similarity=0.399  Sum_probs=46.3

Q ss_pred             ceEEEEcCCCcccCCCCC--CcEEEEEEEecCCCC-cceEEeeecCceEEEEEEeccccCC
Q psy12809         91 PYLEINMTDGTLCDLNGE--PRETRVLYMCHSTGR-HDIYSLKETSTCKYEVIILTSLLCK  148 (153)
Q Consensus        91 ~y~~~~y~~G~~Cd~tg~--~R~t~V~~~C~~~~~-~~I~~V~E~~tC~Y~i~v~tP~lC~  148 (153)
                      ..+.+.|.+|+.|+ +|.  +|+|.|.|.|+++.. .....+.| ..|.|.|.+.||.+|.
T Consensus        90 ~~l~l~Y~~G~~C~-~~~~~~rst~I~f~Cd~~~~~~~p~~~~~-~~C~Y~f~~~T~~ACp  148 (148)
T 2kva_A           90 GMIQLTYRDGTPYN-NEKRTPRATLITFLCDRDAGVGFPEYQEE-DNSTYNFRWYTSYACP  148 (148)
T ss_dssp             TEEEEEEBCCCCCS-CTTCCCCEEEEEEECCSSCSSCCEEECSC-CSSEEEEEEECGGGCC
T ss_pred             CeEEEEECCCCcCC-CCCCceeEEEEEEEeCCCCCCCCCEEeec-CCCEEEEEEeccccCc
Confidence            47899999999999 554  799999999999742 23455655 8999999999999995

>2l2g_A IGF2R domain 11; insulin-like growth factor 2, mannose 6 phosphate receptor, imprinting, protein evolution, signaling protein; NMR {Monodelphis domestica}

Probab=98.69  E-value=7.4e-08  Score=70.64  Aligned_cols=59  Identities=19%  Similarity=0.349  Sum_probs=49.6

Q ss_pred             eEEEEcCCCcccCC-CCCCcEEEEEEEecCCC--CcceEEeee-cCceEEEEEEeccccCCCC
Q psy12809         92 YLEINMTDGTLCDL-NGEPRETRVLYMCHSTG--RHDIYSLKE-TSTCKYEVIILTSLLCKHP  150 (153)
Q Consensus        92 y~~~~y~~G~~Cd~-tg~~R~t~V~~~C~~~~--~~~I~~V~E-~~tC~Y~i~v~tP~lC~~p  150 (153)
                      -+.+.|.+|+.|.- ++.+|+|.|.|.|.++.  ....+.|.| ..+|.|.|.+.|+.+|...
T Consensus        80 ~l~L~Y~~Gs~C~~~~~~~rst~I~F~Cd~~~~~~~~p~~v~~~~~~C~Y~F~w~T~~AC~~~  142 (151)
T 2l2g_A           80 VLQLVYDDGAPCPSKNALKYKSVISFVCTHDSGANNKPVFVSLDKQTCTLYFSWHTPLACEKE  142 (151)
T ss_dssp             EEEEEECSCSBCCSSSSSBCEEEEEEEECSSSSCCCCEEEEEEETTTTEEEEEEEEGGGSCCS
T ss_pred             EEEEEECCCCCCCCCCCceeEEEEEEEECCCCCCCCCcEEEEecCCceEEEEEEechhcCCCC
Confidence            58899999999963 36789999999999873  245677888 6679999999999999854

>2lla_A Mannose-6-phosphate/insulin-like growth factor II; monotreme, IGF-II, domain 11, transport; NMR {Tachyglossus aculeatus}

Probab=98.66  E-value=8.7e-08  Score=68.80  Aligned_cols=59  Identities=22%  Similarity=0.388  Sum_probs=47.1

Q ss_pred             eEEEEcCCCcccCCC-CCCcEEEEEEEecCCCC---cceEEeeecCceEEEEEEeccccCCCC
Q psy12809         92 YLEINMTDGTLCDLN-GEPRETRVLYMCHSTGR---HDIYSLKETSTCKYEVIILTSLLCKHP  150 (153)
Q Consensus        92 y~~~~y~~G~~Cd~t-g~~R~t~V~~~C~~~~~---~~I~~V~E~~tC~Y~i~v~tP~lC~~p  150 (153)
                      -+.+.|.+|+.|.-. +.+|+|.|.|.|+++..   ..+....|...|.|.|.+.|+++|.-+
T Consensus        77 ~l~L~Y~~G~~C~~~~~~~~st~I~F~C~~~~~~~~~p~~~~~~~~~C~y~F~w~T~~ACp~~  139 (140)
T 2lla_A           77 VLQLVYEDGDPCPANLHLKYKSVISFVCKSDAGPTSQPLLLSVDEHTCTLFFSWHTSLACEQE  139 (140)
T ss_dssp             EEEEEEBCCCBCTTTSSCBCEEEEEEEECTTTTTSCEEEEEEECTTTCEEEEEEEEGGGSCCC
T ss_pred             EEEEEEcCCCcCCCCCCceeEEEEEEEcCCCCCCCCCceEEeccCCCCEEEEEEeeCccCCCC
Confidence            478999999999842 46799999999988632   223334678899999999999999865

>2l21_A Cation-independent mannose-6-phosphate receptor; genomic imprinting, insulin-like growth factor 2, mannose 6 receptor, protein evolution; NMR {Gallus gallus}

Probab=98.62  E-value=1.3e-07  Score=69.53  Aligned_cols=61  Identities=21%  Similarity=0.295  Sum_probs=50.2

Q ss_pred             ceEEEEcCCCcccCC-CCCCcEEEEEEEecCCC--CcceEEeee-cCceEEEEEEeccccCCCCC
Q psy12809         91 PYLEINMTDGTLCDL-NGEPRETRVLYMCHSTG--RHDIYSLKE-TSTCKYEVIILTSLLCKHPK  151 (153)
Q Consensus        91 ~y~~~~y~~G~~Cd~-tg~~R~t~V~~~C~~~~--~~~I~~V~E-~~tC~Y~i~v~tP~lC~~p~  151 (153)
                      .-+.+.|.+|+.|.- .+.+|+|.|.|.|.++.  ....+.|.| ...|.|.|.+.|+.+|....
T Consensus        82 ~~l~L~Y~~Gs~C~~~~~~~rsT~I~F~Cd~~~~~~~~p~~v~~~~d~C~Y~F~w~T~~AC~~~~  146 (154)
T 2l21_A           82 QVLKLVYEDGDPCPTDLKMKHKSYFSFVCKSDAGDDSQPVFLSFDEQTCTSYFSWHTSLACEEEV  146 (154)
T ss_dssp             TEEEEEEECCCCCSSCSSSCCEEEEEEECCSSCTTTTCEEEEEEETTTTEEEEEEECTTTCCSSC
T ss_pred             CEEEEEECCCCcCCCCCCCEEEEEEEEEECCCCCCCCceEEEEECCCCeEEEEEEeccccCCCCC
Confidence            357899999999963 57899999999999873  245677775 67899999999999998654

>1q25_A CI, cation-independent mannose 6-phosphate receptor, MAN-6-P receptor, CI-MPR; P-lectin, protein transport,S binding protein; HET: MAN BMA NAG; 1.80A {Bos taurus} SCOP: b.64.1.1 b.64.1.1 b.64.1.1 PDB: 1syo_A* 1sz0_A*

Probab=98.27  E-value=1.7e-06  Score=72.98  Aligned_cols=54  Identities=22%  Similarity=0.337  Sum_probs=47.9

Q ss_pred             EEEEcCCCcccCCCCCCcEEEEEEEecCCCC----cceEEeeecCceEEEEEEeccccCC
Q psy12809         93 LEINMTDGTLCDLNGEPRETRVLYMCHSTGR----HDIYSLKETSTCKYEVIILTSLLCK  148 (153)
Q Consensus        93 ~~~~y~~G~~Cd~tg~~R~t~V~~~C~~~~~----~~I~~V~E~~tC~Y~i~v~tP~lC~  148 (153)
                      +.+.|.+|+.|. ++..|++.|.|.|.++..    ..++.+.|. .|.|.|++.|+.+|.
T Consensus       375 l~L~Y~~G~~C~-~~~~rst~I~f~Cd~~~~~~~~~~p~~~~e~-~C~Y~f~~~T~~AC~  432 (432)
T 1q25_A          375 LTLIYFGGEECS-SGFQRMSVINFECNQTAGNNGRGAPVFTGEV-DCTYFFTWDTKYACV  432 (432)
T ss_dssp             EEEEECCCCBCT-TSCBCEEEEEEEECTTCTTTTTCCCEEEEEE-TTEEEEEEEEGGGCC
T ss_pred             EEEEECCCCcCC-CCCeeEEEEEEEeCCCCCcCCCCccEEEeeC-ceEEEEEEeeeEecC
Confidence            789999999998 899999999999998642    346788898 899999999999994

>2v5o_A Cation-independent mannose-6-phosphate receptor; membrane, lysosome, transport, beta barrel, phosphorylation, fibronec II; HET: NAG; 2.91A {Homo sapiens} PDB: 2v5p_A* 2v5n_A*

Probab=97.95  E-value=1.7e-05  Score=69.77  Aligned_cols=59  Identities=19%  Similarity=0.396  Sum_probs=49.4

Q ss_pred             eEEEEcCCCcccC-CCCCCcEEEEEEEecCCC--CcceEEeee-cCceEEEEEEeccccCCCC
Q psy12809         92 YLEINMTDGTLCD-LNGEPRETRVLYMCHSTG--RHDIYSLKE-TSTCKYEVIILTSLLCKHP  150 (153)
Q Consensus        92 y~~~~y~~G~~Cd-~tg~~R~t~V~~~C~~~~--~~~I~~V~E-~~tC~Y~i~v~tP~lC~~p  150 (153)
                      -+.+.|.+|+.|. .+|.+|+|.|.|.|+++.  ....+.|.| ...|.|.|.+.||++|..+
T Consensus        80 ~l~L~Y~~G~~C~~~~~~~~sT~I~f~Cd~~~~~~~~p~~v~~~~~~C~y~f~w~T~~AC~~~  142 (627)
T 2v5o_A           80 VLQLVYKDGSPCPSKSGLSYKSVISFVCRPEAGPTNRPMLISLDKQTCTLFFSWHTPLACEQA  142 (627)
T ss_dssp             EEEEEEBSCSBCSSSTTCBCEEEEEEEECSSCCTTCSCEEEEEETTTTEEEEEEEEGGGCCSC
T ss_pred             EEEEEECCCCcCCCCCCceEEEEEEEEeCCCCCcCCcceEeeecCCCcEEEEEEecHHhCCCC
Confidence            4778999999997 357899999999998863  245677887 7899999999999999743

>1q25_A CI, cation-independent mannose 6-phosphate receptor, MAN-6-P receptor, CI-MPR; P-lectin, protein transport,S binding protein; HET: MAN BMA NAG; 1.80A {Bos taurus} SCOP: b.64.1.1 b.64.1.1 b.64.1.1 PDB: 1syo_A* 1sz0_A*

Probab=97.66  E-value=7e-05  Score=63.01  Aligned_cols=56  Identities=25%  Similarity=0.576  Sum_probs=45.1

Q ss_pred             eEEEEcCCC-----cccCCCCCCcEEEEEEEecCCCC-cceEEeeecCceEEEEEEeccccCCC
Q psy12809         92 YLEINMTDG-----TLCDLNGEPRETRVLYMCHSTGR-HDIYSLKETSTCKYEVIILTSLLCKH  149 (153)
Q Consensus        92 y~~~~y~~G-----~~Cd~tg~~R~t~V~~~C~~~~~-~~I~~V~E~~tC~Y~i~v~tP~lC~~  149 (153)
                      -+.+.|.+|     +.|.  +..|+|+|.|.|+++.. ..+..+.|...|.|.|++.|+.+|..
T Consensus       221 ~l~L~Y~~g~~~~~~~C~--~~~~st~I~f~C~~~~~~~~~~~~~~~~~C~Y~fe~~T~~ACp~  282 (432)
T 1q25_A          221 RLVLSYVKEGAGQPDFCD--GHSPAVTITFVCPSERREGTIPKLTAKSNCRFEIEWVTEYACHR  282 (432)
T ss_dssp             EEEEEEECCSSCCCCTTS--SCCCEEEEEEECCSSCCCCCCCEEEEESSSEEEEEEECGGGSCG
T ss_pred             cEEEEEcCCCcCCCCcCC--CcccEEEEEEEcCCCCCCCCCceEEecCCCEEEEEEeecccCCC
Confidence            478899999     5664  67899999999998642 12445668889999999999999975

>2v5o_A Cation-independent mannose-6-phosphate receptor; membrane, lysosome, transport, beta barrel, phosphorylation, fibronec II; HET: NAG; 2.91A {Homo sapiens} PDB: 2v5p_A* 2v5n_A*

Probab=97.60  E-value=0.00011  Score=64.54  Aligned_cols=57  Identities=12%  Similarity=0.289  Sum_probs=46.0

Q ss_pred             EEEEcCCCcccCCCCCCcEEEEEEEecCCCCcceEEeeecCceEEEEEEeccccCCCC
Q psy12809         93 LEINMTDGTLCDLNGEPRETRVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHP  150 (153)
Q Consensus        93 ~~~~y~~G~~Cd~tg~~R~t~V~~~C~~~~~~~I~~V~E~~tC~Y~i~v~tP~lC~~p  150 (153)
                      +.+.|.+|+.|- .+..|++.|+|.|+......+....|...|.|.|...|.++|...
T Consensus       565 v~l~Y~~G~~C~-~~~~~st~I~f~C~~~~g~P~~~~~~~~~C~y~f~W~T~~AC~~~  621 (627)
T 2v5o_A          565 VVVTYSKGYPCG-GNKTASSVIELTCTKTVGRPAFKRFDIDSCTYYFSWDSRAACAVK  621 (627)
T ss_dssp             EEEEECCCSBCS-TTCBCEEEEEEEECSSEEEEEEEEEETTTTEEEEEEEEGGGCCCC
T ss_pred             EEEEECCCCcCC-CCCcceEEEEEEeCCCCCCcEEEEecCCCCEEEEEeCChhhcccc
Confidence            789999999997 677899999999986421223334567789999999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	153
d1q25a1	123	b.64.1.1 (A:7-129) Cation-independent mannose-6-ph	1e-04

>d1q25a1 b.64.1.1 (A:7-129) Cation-independent mannose-6-phosphate receptor (MIR-receptor) {Cow (Bos taurus) [TaxId: 9913]} Length = 123

class: All beta proteins
fold: Mannose 6-phosphate receptor domain
superfamily: Mannose 6-phosphate receptor domain
family: Mannose 6-phosphate receptor domain
domain: Cation-independent mannose-6-phosphate receptor (MIR-receptor)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 37.7 bits (87), Expect = 1e-04
 Identities = 9/61 (14%), Positives = 19/61 (31%), Gaps = 2/61 (3%)

Query: 93  LEINMTDGTLCDLNGEPRETRVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKF 152
             +       C       ++ + ++C  T     +     + C +     T+  CK   F
Sbjct: 65  SLLEFNTTVNCKQQNHKIQSSITFLCGKTLGTPEFV--TATDCVHYFEWRTTAACKKNIF 122

Query: 153 K 153
           K
Sbjct: 123 K 123

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	153
d2rl8a1	151	Cation-dependent mannose 6-phosphate receptor, ext	98.83
d1q25a1	123	Cation-independent mannose-6-phosphate receptor (M	98.62
d1gp0a_	133	Cation-independent mannose-6-phosphate receptor (M	98.6
d1q25a3	152	Cation-independent mannose-6-phosphate receptor (M	98.55
d1q25a2	151	Cation-independent mannose-6-phosphate receptor (M	98.44

>d2rl8a1 b.64.1.1 (A:4-154) Cation-dependent mannose 6-phosphate receptor, extracytoplasmic domain {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Mannose 6-phosphate receptor domain
superfamily: Mannose 6-phosphate receptor domain
family: Mannose 6-phosphate receptor domain
domain: Cation-dependent mannose 6-phosphate receptor, extracytoplasmic domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.83  E-value=1.9e-08  Score=71.86  Aligned_cols=110  Identities=19%  Similarity=0.263  Sum_probs=71.9

Q ss_pred             HhhhhcCCCCceeec----CCeEEEEEec---------CCeeEEeecCCCCCceecccceEEeeecCccccccCCCCCCc
Q psy12809         14 FIEPLFSQKPCSYRL----ESYWTYEVCH---------GRYVRQFHEDRESKKEVKLQEYYLGRWDKTLNKLQDSPEGVM   80 (153)
Q Consensus        14 ll~~l~~~~~C~~~~----~g~WtYe~C~---------~~~v~Qfh~~~~~g~~~~~~~~~LG~~~~~~~~~~~~~~~~~   80 (153)
                      -|.||.  ++.+...    .+-|+|.|-.         +-.+-|.....       ...+.||..+....          
T Consensus        22 ~LspL~--n~~~~~~v~~~~~~y~y~inVC~~~~~~~~~a~~Cq~~~~~-------~~~~~lG~~~~~~~----------   82 (151)
T d2rl8a1          22 RLTPLF--QKSFESTVGQSPDMYSYVFRVCREAGQHSSGAGLVQIQKSN-------GKETVVGRFNETQI----------   82 (151)
T ss_dssp             HTGGGT--TCCEECCCC---CCEEEEECSSSCCSSSSSCEEEEEEETTT-------CCEEEEEEEEEEEE----------
T ss_pred             hcCccc--cCCcceEECcCCccEEEEEEeCCCCCCCCCCceEEEEecCC-------CeEEEeeeeccccE----------
Confidence            577774  4666542    3447887733         22444544332       23468998875311          


Q ss_pred             cceeecCcccceEEEEcCCCcccCC--CCCCcEEEEEEEecCCCC---cce--EEeeecCceEEEEEEeccccCC
Q psy12809         81 GFKKIEGIKLPYLEINMTDGTLCDL--NGEPRETRVLYMCHSTGR---HDI--YSLKETSTCKYEVIILTSLLCK  148 (153)
Q Consensus        81 ~~~~~~~~~~~y~~~~y~~G~~Cd~--tg~~R~t~V~~~C~~~~~---~~I--~~V~E~~tC~Y~i~v~tP~lC~  148 (153)
                        . .   ....+.+.|.+|+.|+-  .+.+|++.|.|.|++...   +.+  ..+.|...|.|.|.+.||++|.
T Consensus        83 --~-~---~~~~l~L~Y~~G~~C~~~~~~~~rst~I~F~Cd~~~~~~~~~~~~e~~~~~~~C~Y~F~w~T~~ACs  151 (151)
T d2rl8a1          83 --F-Q---GSNWIMLIYKGGDEYDNHCGREQRRAVVMISCNRHTLADNFNPVSEERGKVQDCFYLFEMDSSLACS  151 (151)
T ss_dssp             --E-E---CSSEEEEEEEECCBCSSSGGGCBCCEEEEEEECTTCSSEEEEEEEEECCSSSCCEEEEEEEEGGGCC
T ss_pred             --E-c---cCCeEEEEECCCCccCCCCCCceeEEEEEEEeCCCCcCCCceeeeecccCCCceEEEEEEeehhccC
Confidence              0 1   12357899999999985  267899999999988632   112  2446788999999999999995

>d1q25a1 b.64.1.1 (A:7-129) Cation-independent mannose-6-phosphate receptor (MIR-receptor) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Mannose 6-phosphate receptor domain
superfamily: Mannose 6-phosphate receptor domain
family: Mannose 6-phosphate receptor domain
domain: Cation-independent mannose-6-phosphate receptor (MIR-receptor)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.62  E-value=1.8e-08  Score=69.70  Aligned_cols=58  Identities=16%  Similarity=0.261  Sum_probs=47.0

Q ss_pred             EEEcCCCcccCCCCCCcEEEEEEEecCCCCcceEEeeecCceEEEEEEeccccCCCCCCC
Q psy12809         94 EINMTDGTLCDLNGEPRETRVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHPKFK  153 (153)
Q Consensus        94 ~~~y~~G~~Cd~tg~~R~t~V~~~C~~~~~~~I~~V~E~~tC~Y~i~v~tP~lC~~p~f~  153 (153)
                      .+.|.+|+.|.-.+.+|+|.|.|.|++.. ..-+-+.| ..|.|.|.+.|+++|.-..||
T Consensus        66 ~L~Y~~G~~C~~~~~~~st~I~F~C~~~~-g~p~~~~~-~~C~y~F~W~T~~AC~~~~~~  123 (123)
T d1q25a1          66 LLEFNTTVNCKQQNHKIQSSITFLCGKTL-GTPEFVTA-TDCVHYFEWRTTAACKKNIFK  123 (123)
T ss_dssp             EEEEEEEEECSSTTCEEEEEEEEEECSSC-CCEEEEEE-CSSEEEEEEEEGGGSSSGGGC
T ss_pred             EEEEECCCcCCCCCceEEEEEEEEeCCCC-CcceEEec-CCCEEEEEEeccccCcccccC
Confidence            57899999998778888999999998763 22233445 569999999999999987775

>d1gp0a_ b.64.1.1 (A:) Cation-independent mannose-6-phosphate receptor (MIR-receptor) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Mannose 6-phosphate receptor domain
superfamily: Mannose 6-phosphate receptor domain
family: Mannose 6-phosphate receptor domain
domain: Cation-independent mannose-6-phosphate receptor (MIR-receptor)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=8.1e-08  Score=66.49  Aligned_cols=57  Identities=19%  Similarity=0.413  Sum_probs=46.6

Q ss_pred             eEEEEcCCCcccCC-CCCCcEEEEEEEecCCCC---cceEEeeecCceEEEEEEeccccCC
Q psy12809         92 YLEINMTDGTLCDL-NGEPRETRVLYMCHSTGR---HDIYSLKETSTCKYEVIILTSLLCK  148 (153)
Q Consensus        92 y~~~~y~~G~~Cd~-tg~~R~t~V~~~C~~~~~---~~I~~V~E~~tC~Y~i~v~tP~lC~  148 (153)
                      -+.+.|.+|+.|.- ++.+|+|.|.|.|++...   ..+..+.|...|.|.|.+.||++|+
T Consensus        73 ~l~L~Y~~g~~c~~~~~~~rst~I~f~Cd~~~~~~~~~~~~~~~~~~C~y~f~w~T~~AC~  133 (133)
T d1gp0a_          73 VLQLVYKDGSPCPSKSGLSYKSVISFVCRPEAGPTNRPMLISLDKQTCTLFFSWHTPLACE  133 (133)
T ss_dssp             EEEEEECCCSBCSSSTTCBCEEEEEEEECSSCCSSCCCEEEEEETTTTEEEEEEEEGGGCC
T ss_pred             EEEEEECCCCcCCCCCCceeEEEEEEEeCCCCCCCCccceEEecCCCcEEEEEEechhhcC
Confidence            47899999999974 478899999999998632   2234456788999999999999996

>d1q25a3 b.64.1.1 (A:281-432) Cation-independent mannose-6-phosphate receptor (MIR-receptor) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Mannose 6-phosphate receptor domain
superfamily: Mannose 6-phosphate receptor domain
family: Mannose 6-phosphate receptor domain
domain: Cation-independent mannose-6-phosphate receptor (MIR-receptor)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.55  E-value=6.2e-08  Score=68.31  Aligned_cols=55  Identities=20%  Similarity=0.343  Sum_probs=44.2

Q ss_pred             eEEEEcCCCcccCCCCCCcEEEEEEEecCCCC---cceEEeeecCceEEEEEEeccccC
Q psy12809         92 YLEINMTDGTLCDLNGEPRETRVLYMCHSTGR---HDIYSLKETSTCKYEVIILTSLLC  147 (153)
Q Consensus        92 y~~~~y~~G~~Cd~tg~~R~t~V~~~C~~~~~---~~I~~V~E~~tC~Y~i~v~tP~lC  147 (153)
                      -+.+.|.+|+.|. ++..|++.|.|.|++...   .....+.|...|.|.|.+.||++|
T Consensus        94 ~l~l~Y~~g~~C~-~~~~rst~I~f~Cd~~~~~~~~~~p~~~~~~~C~y~f~w~T~~AC  151 (152)
T d1q25a3          94 DLTLIYFGGEECS-SGFQRMSVINFECNQTAGNNGRGAPVFTGEVDCTYFFTWDTKYAC  151 (152)
T ss_dssp             EEEEEECCCCBCT-TSCBCEEEEEEEECTTCTTTTTCCCEEEEEETTEEEEEEEEGGGC
T ss_pred             cEEEEECCCCcCC-CCCcEEEEEEEECCCCcccCCCCccEEecCCCcEEEEEEeccEEe
Confidence            4788999999999 789999999999998531   111123444689999999999999

>d1q25a2 b.64.1.1 (A:130-280) Cation-independent mannose-6-phosphate receptor (MIR-receptor) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Mannose 6-phosphate receptor domain
superfamily: Mannose 6-phosphate receptor domain
family: Mannose 6-phosphate receptor domain
domain: Cation-independent mannose-6-phosphate receptor (MIR-receptor)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.44  E-value=1.9e-07  Score=66.09  Aligned_cols=56  Identities=20%  Similarity=0.415  Sum_probs=47.0

Q ss_pred             eEEEEcCCCcccCC---CCCCcEEEEEEEecCCC-CcceEEeeecCceEEEEEEeccccC
Q psy12809         92 YLEINMTDGTLCDL---NGEPRETRVLYMCHSTG-RHDIYSLKETSTCKYEVIILTSLLC  147 (153)
Q Consensus        92 y~~~~y~~G~~Cd~---tg~~R~t~V~~~C~~~~-~~~I~~V~E~~tC~Y~i~v~tP~lC  147 (153)
                      -+.+.|.+|+.|..   ++.+|++.|.|.|++.. ...+..+.|...|.|.|.+.||.+|
T Consensus        92 ~l~L~Y~~g~~c~~~~~~~~~~st~I~F~C~~~~~~~~~~~~~~~~~C~y~F~W~T~~AC  151 (151)
T d1q25a2          92 RLVLSYVKEGAGQPDFCDGHSPAVTITFVCPSERREGTIPKLTAKSNCRFEIEWVTEYAC  151 (151)
T ss_dssp             EEEEEEECCSSCCCCTTSSCCCEEEEEEECCSSCCCCCCCEEEEESSSEEEEEEECGGGS
T ss_pred             eEEEEEeCCCccCCCccCCceeEEEEEEEECCCCCCCCCcEEeecCCcEEEEEEeccccC
Confidence            47899999999964   47889999999998763 2445567888899999999999999