Psyllid ID: psy12865

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------
Protein Sequence
MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQETYFSSALPLAAPPKSPAKLKSRSNQPNMEDEDNCDRGSLASYGSGNTTDSDKASSLEAKQLWVKRLREVIQETYFSSALPLAAPPKSPASASSLEAKQLWVKRLREVIQETYFSSALPLAAPPKSPAKLKSRSNQPNMEDEDNCDRGSLASYGSGNTTDSDKPLTAC
Secondary Structure (PSIPRED)
ccccccccccccEEcccccccEEEEEccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEcccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccEEcccccccEEEEEEcccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccccHHHHHHHHHHHcccccccHcHcccccccEEEcccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEEEcccccccccccccccc
Coil and Loop (DISEMBL)
mkgrlmtselgvtehiegdeckfavwtgrapisdCRILLKASSLEAKQLWVKRLREVIQETYfssalplaappkspaklksrsnqpnmededncdrgslasygsgnttdsdkasSLEAKQLWVKRLREVIQETYfssalplaappkspasassLEAKQLWVKRLREVIQETYfssalplaappkspaklksrsnqpnmededncdrgslasygsgnttdsdkpltac
Flexible Loop (DISEMBL)
mkgrlmtselgvtehiegdeCKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQETYfssalplaappkspaklksrsnqpnmededncdrGSLASYGsgnttdsdkassLEAKQLWVKRLREVIQETYFssalplaappKSPASASSLEAKQLWVKRLREVIQETYfssalplaappkspaklksrsnqpnmededncdrgslasygsgnttdsdkpltac
Low Complexity Region (SEG)
MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQETYFssalplaappkspaklksRSNQPNMEDEDNCDRGSLASYGSGNTTDSDKASSLEAKQLWVKRLREVIQETYFssalplaappkspasassleaKQLWVKRLREVIQETYFssalplaappkspaklksRSNQPNMEDEDNCDRGSLASYGSGNTTDSDKPLTAC
Disordered region (IsUnstruct)
**********GVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQETYFSSAL****************************************************QLWVKRLREVIQETYFSSAL******************QLWVKRLREVIQETYFSSA***************************************************
Disordered Region (DISOPRED)
*****M*SELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE****************************************************************************************************VKRLREVIQETYF******************************************************
Disordered Region (DISEMBL)
MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQETYFSSALPLAA*********************NCDRGSLASYGS***********LEAKQLWVKRLREVIQETYFSSALPL*************EAKQLWVKRLREVIQETYFSSALPLAA*********************NCDRGSLASYGS*************
Disordered Region (DISPRO)
**GRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQETYFSSALPL***************************GSLASYGSGNTTDSDKASSLEAKQLWVKRLREVIQETYFSSALPLAAPPKSPASASSLEAKQLWVKRLREVIQETYFSSALPL*A*************************G********************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQETYFSSALPLAAPPKSPAKLKSRSNQPNMEDEDNCDRGSLASYGSGNTTDSDKASSLEAKQLWVKRLREVIQETYFSSALPLAAPPKSPASASSLEAKQLWVKRLREVIQETYFSSALPLAAPPKSPAKLKSRSNQPNMEDEDNCDRGSLASYGSGNTTDSDKPLTAC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	227	2.2.26 [Sep-21-2011]
P97924	2959	Kalirin OS=Rattus norvegi	yes	N/A	0.497	0.038	0.504	4e-25
A2CG49	2964	Kalirin OS=Mus musculus G	no	N/A	0.497	0.038	0.504	4e-25
O60229	2985	Kalirin OS=Homo sapiens G	yes	N/A	0.497	0.037	0.504	8e-25
Q1LUA6	3028	Triple functional domain	no	N/A	0.497	0.037	0.512	2e-24
O75962	3097	Triple functional domain	no	N/A	0.497	0.036	0.5	2e-23
Q0KL02	3102	Triple functional domain	no	N/A	0.497	0.036	0.5	2e-23

>sp|P97924|KALRN_RAT Kalirin OS=Rattus norvegicus GN=Kalrn PE=1 SV=3

 Score =  114 bits (286), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 62/123 (50%), Positives = 81/123 (65%), Gaps = 10/123 (8%)

Query: 2    KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
            K +L+TSELGVTEH+EGD CKFA+W+GR P SD + +LKAS++E KQ W+K +REVIQE 
Sbjct: 1496 KNKLLTSELGVTEHVEGDPCKFALWSGRTPSSDNKTVLKASNIETKQEWIKNIREVIQER 1555

Query: 62   YFSSALPLAAP---PKSPAKLKSRSNQPNMEDEDNCDRG-------SLASYGSGNTTDSD 111
                   L  P   PK+PAKL++ S +  +ED D+   G       S+AS  S NT +SD
Sbjct: 1556 IIHLKGALKEPIQLPKTPAKLRNNSKRDGVEDGDSQGDGSSQPDTISIASRTSQNTVESD 1615

Query: 112  KAS 114
            K S
Sbjct: 1616 KLS 1618

Promotes the exchange of GDP by GTP. Activates specific Rho GTPase family members, thereby inducing various signaling mechanisms that regulate neuronal shape, growth, and plasticity, through their effects on the actin cytoskeleton. Induces lamellipodia independent of its GEF activity. Isoforms 1 and 7 are necessary for neuronal development and axonal outgrowth. Isoform 6 is required for dendritic spine formation.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|A2CG49|KALRN_MOUSE Kalirin OS=Mus musculus GN=Kalrn PE=1 SV=1

 Score =  114 bits (286), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 62/123 (50%), Positives = 81/123 (65%), Gaps = 10/123 (8%)

Query: 2    KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
            K +L+TSELGVTEH+EGD CKFA+W+GR P SD + +LKAS++E KQ W+K +REVIQE 
Sbjct: 1496 KNKLLTSELGVTEHVEGDPCKFALWSGRTPSSDNKTVLKASNIETKQEWIKNIREVIQER 1555

Query: 62   YFSSALPLAAP---PKSPAKLKSRSNQPNMEDEDNCDRG-------SLASYGSGNTTDSD 111
                   L  P   PK+PAKL++ S +  +ED D+   G       S+AS  S NT +SD
Sbjct: 1556 IIHLKGALKEPIQLPKTPAKLRNNSKRDGVEDGDSQGDGSSQPDTISIASRTSQNTVESD 1615

Query: 112  KAS 114
            K S
Sbjct: 1616 KLS 1618

Promotes the exchange of GDP by GTP. Activates specific Rho GTPase family members, thereby inducing various signaling mechanisms that regulate neuronal shape, growth, and plasticity, through their effects on the actin cytoskeleton. Induces lamellipodia independent of its GEF activity.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O60229|KALRN_HUMAN Kalirin OS=Homo sapiens GN=KALRN PE=1 SV=2

 Score =  114 bits (284), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 62/123 (50%), Positives = 80/123 (65%), Gaps = 10/123 (8%)

Query: 2    KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
            K +L+TSELGVTEH+EGD CKFA+W+GR P SD + +LKAS++E KQ W+K +REVIQE 
Sbjct: 1523 KNKLLTSELGVTEHVEGDPCKFALWSGRTPSSDNKTVLKASNIETKQEWIKNIREVIQER 1582

Query: 62   YFSSALPLAAP---PKSPAKLKSRSNQPNMEDEDNCDRG-------SLASYGSGNTTDSD 111
                   L  P   PK+PAK ++ S +  +ED D+   G       S+AS  S NT DSD
Sbjct: 1583 IIHLKGALKEPLQLPKTPAKQRNNSKRDGVEDIDSQGDGSSQPDTISIASRTSQNTVDSD 1642

Query: 112  KAS 114
            K S
Sbjct: 1643 KLS 1645

Promotes the exchange of GDP by GTP. Activates specific Rho GTPase family members, thereby inducing various signaling mechanisms that regulate neuronal shape, growth, and plasticity, through their effects on the actin cytoskeleton. Induces lamellipodia independent of its GEF activity.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q1LUA6|TRIO_DANRE Triple functional domain protein OS=Danio rerio GN=trio PE=3 SV=1

 Score =  112 bits (280), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/121 (51%), Positives = 78/121 (64%), Gaps = 8/121 (6%)

Query: 2    KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE- 60
            K +L TSELGVTEH+EGD CKFA+W GR P SD +I+LKAS +E KQ W+K +REVIQE 
Sbjct: 1485 KSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASGIENKQDWIKHIREVIQER 1544

Query: 61   -TYFSSAL--PLAAPPKSPAKLKSRSNQPNMEDEDNC----DRGSLASYGSGNTTDSDKA 113
              +   AL  P+  P  S AK K R +  +++ + +     D  SLAS  S NT DSDK 
Sbjct: 1545 TVHLKGALKEPIHIPKASTAKHKGRRDGEDLDSQGDGSSQPDTISLASRTSQNTLDSDKL 1604

Query: 114  S 114
            S
Sbjct: 1605 S 1605

Promotes the exchange of GDP by GTP. Together with leukocyte antigen-related (LAR) protein, it could play a role in coordinating cell-matrix and cytoskeletal rearrangements necessary for cell migration and cell growth.

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O75962|TRIO_HUMAN Triple functional domain protein OS=Homo sapiens GN=TRIO PE=1 SV=2

 Score =  109 bits (272), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/122 (50%), Positives = 80/122 (65%), Gaps = 9/122 (7%)

Query: 2    KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE- 60
            K +L TSELGVTEH+EGD CKFA+W GR P SD +I+LKASS+E KQ W+K +REVIQE 
Sbjct: 1534 KSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQER 1593

Query: 61   -TYFSSAL--PLAAPPKSPA-KLKSRSNQPNMEDEDNC----DRGSLASYGSGNTTDSDK 112
              +   AL  P+  P  +PA + K R +  +++ + +     D  S+AS  S NT DSDK
Sbjct: 1594 TIHLKGALKEPIHIPKTAPATRQKGRRDGEDLDSQGDGSSQPDTISIASRTSQNTLDSDK 1653

Query: 113  AS 114
             S
Sbjct: 1654 LS 1655

Promotes the exchange of GDP by GTP. Together with leukocyte antigen-related (LAR) protein, it could play a role in coordinating cell-matrix and cytoskeletal rearrangements necessary for cell migration and cell growth.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q0KL02|TRIO_MOUSE Triple functional domain protein OS=Mus musculus GN=Trio PE=1 SV=3

 Score =  109 bits (272), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/122 (50%), Positives = 80/122 (65%), Gaps = 9/122 (7%)

Query: 2    KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE- 60
            K +L TSELGVTEH+EGD CKFA+W GR P SD +I+LKASS+E KQ W+K +REVIQE 
Sbjct: 1534 KSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQER 1593

Query: 61   -TYFSSAL--PLAAPPKSP-AKLKSRSNQPNMEDEDNC----DRGSLASYGSGNTTDSDK 112
              +   AL  P+  P  +P A+ K R +  +++ + +     D  S+AS  S NT DSDK
Sbjct: 1594 TVHLRGALKEPIHIPKTAPAARQKGRRDGEDLDSQGDGSSQPDTISIASRTSQNTLDSDK 1653

Query: 113  AS 114
             S
Sbjct: 1654 LS 1655

Promotes the exchange of GDP by GTP. Together with leukocyte antigen-related (LAR) protein, it could play a role in coordinating cell-matrix and cytoskeletal rearrangements necessary for cell migration and cell growth.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	227
328706378	2220	PREDICTED: triple functional domain prot	0.524	0.053	0.731	7e-42
328706380	2247	PREDICTED: triple functional domain prot	0.524	0.052	0.731	8e-42
328706374	2227	PREDICTED: triple functional domain prot	0.524	0.053	0.731	9e-42
328706376	2254	PREDICTED: triple functional domain prot	0.524	0.052	0.731	1e-41
189235153	1604	PREDICTED: similar to AGAP006107-PA [Tri	0.511	0.072	0.698	1e-39
270003787	2475	hypothetical protein TcasGA2_TC003063 [T	0.484	0.044	0.725	3e-39
242007895	2251	Huntingtin-associated protein-interactin	0.511	0.051	0.693	2e-38
340715586	3145	PREDICTED: triple functional domain prot	0.506	0.036	0.623	1e-33
350396743	3149	PREDICTED: triple functional domain prot	0.506	0.036	0.623	2e-33
328789247	3087	PREDICTED: triple functional domain prot	0.506	0.037	0.623	2e-33

>gi|328706378|ref|XP_003243074.1| PREDICTED: triple functional domain protein-like isoform 3 [Acyrthosiphon pisum]

 Score =  176 bits (446), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 90/123 (73%), Positives = 103/123 (83%), Gaps = 4/123 (3%)

Query: 2    KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
            K +LMTSELGVTEHIEGDECKFAVWTGRAPISD RI+LKAS+LEAKQ WVK+LREVIQET
Sbjct: 1522 KNKLMTSELGVTEHIEGDECKFAVWTGRAPISDYRIVLKASTLEAKQTWVKKLREVIQET 1581

Query: 62   YFSSALPLAAPPKSPAKLKSRSNQPNME-DEDNCDRGSLASYGSGNTTDSDKASSLEAKQ 120
            YF+SAL +   PKSPAKLK  S + + + +E+N DRGSLAS+GSGNTTDSDK S +E   
Sbjct: 1582 YFNSALRMYM-PKSPAKLKPDSQRSSRDLEEENLDRGSLASFGSGNTTDSDKNSGVEMT- 1639

Query: 121  LWV 123
             WV
Sbjct: 1640 -WV 1641

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328706380|ref|XP_003243075.1| PREDICTED: triple functional domain protein-like isoform 4 [Acyrthosiphon pisum]

 Score =  176 bits (445), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 90/123 (73%), Positives = 103/123 (83%), Gaps = 4/123 (3%)

Query: 2    KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
            K +LMTSELGVTEHIEGDECKFAVWTGRAPISD RI+LKAS+LEAKQ WVK+LREVIQET
Sbjct: 1522 KNKLMTSELGVTEHIEGDECKFAVWTGRAPISDYRIVLKASTLEAKQTWVKKLREVIQET 1581

Query: 62   YFSSALPLAAPPKSPAKLKSRSNQPNME-DEDNCDRGSLASYGSGNTTDSDKASSLEAKQ 120
            YF+SAL +   PKSPAKLK  S + + + +E+N DRGSLAS+GSGNTTDSDK S +E   
Sbjct: 1582 YFNSALRMYM-PKSPAKLKPDSQRSSRDLEEENLDRGSLASFGSGNTTDSDKNSGVEMT- 1639

Query: 121  LWV 123
             WV
Sbjct: 1640 -WV 1641

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328706374|ref|XP_003243072.1| PREDICTED: triple functional domain protein-like isoform 1 [Acyrthosiphon pisum]

 Score =  176 bits (445), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 90/123 (73%), Positives = 103/123 (83%), Gaps = 4/123 (3%)

Query: 2    KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
            K +LMTSELGVTEHIEGDECKFAVWTGRAPISD RI+LKAS+LEAKQ WVK+LREVIQET
Sbjct: 1529 KNKLMTSELGVTEHIEGDECKFAVWTGRAPISDYRIVLKASTLEAKQTWVKKLREVIQET 1588

Query: 62   YFSSALPLAAPPKSPAKLKSRSNQPNME-DEDNCDRGSLASYGSGNTTDSDKASSLEAKQ 120
            YF+SAL +   PKSPAKLK  S + + + +E+N DRGSLAS+GSGNTTDSDK S +E   
Sbjct: 1589 YFNSALRMYM-PKSPAKLKPDSQRSSRDLEEENLDRGSLASFGSGNTTDSDKNSGVEMT- 1646

Query: 121  LWV 123
             WV
Sbjct: 1647 -WV 1648

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328706376|ref|XP_003243073.1| PREDICTED: triple functional domain protein-like isoform 2 [Acyrthosiphon pisum]

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 90/123 (73%), Positives = 103/123 (83%), Gaps = 4/123 (3%)

Query: 2    KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
            K +LMTSELGVTEHIEGDECKFAVWTGRAPISD RI+LKAS+LEAKQ WVK+LREVIQET
Sbjct: 1529 KNKLMTSELGVTEHIEGDECKFAVWTGRAPISDYRIVLKASTLEAKQTWVKKLREVIQET 1588

Query: 62   YFSSALPLAAPPKSPAKLKSRSNQPNME-DEDNCDRGSLASYGSGNTTDSDKASSLEAKQ 120
            YF+SAL +   PKSPAKLK  S + + + +E+N DRGSLAS+GSGNTTDSDK S +E   
Sbjct: 1589 YFNSALRMYM-PKSPAKLKPDSQRSSRDLEEENLDRGSLASFGSGNTTDSDKNSGVEMT- 1646

Query: 121  LWV 123
             WV
Sbjct: 1647 -WV 1648

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189235153|ref|XP_968509.2| PREDICTED: similar to AGAP006107-PA [Tribolium castaneum]

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 88/126 (69%), Positives = 98/126 (77%), Gaps = 10/126 (7%)

Query: 2    KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
            K +LMTSELGVTEH+EGDECKFAVWTGRAPISD RI+L+ASSLE KQLWVK+LREVIQET
Sbjct: 1472 KNKLMTSELGVTEHMEGDECKFAVWTGRAPISDYRIVLRASSLETKQLWVKKLREVIQET 1531

Query: 62   YFSSALPLAAPPKSPAKLKSRSNQP-------NMEDE--DNCDRGSLASYGSGNTTDSDK 112
            YFS ALPL+  PKSPAKLK  S +        N  DE  +N DR SL S+GSGNTTDSDK
Sbjct: 1532 YFSGALPLSL-PKSPAKLKPHSQRSSRDLEECNSLDESVENLDRNSLTSFGSGNTTDSDK 1590

Query: 113  ASSLEA 118
               + A
Sbjct: 1591 CFGVMA 1596

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270003787|gb|EFA00235.1| hypothetical protein TcasGA2_TC003063 [Tribolium castaneum]

 Score =  167 bits (423), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 87/120 (72%), Positives = 96/120 (80%), Gaps = 10/120 (8%)

Query: 2    KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
            K +LMTSELGVTEH+EGDECKFAVWTGRAPISD RI+L+ASSLE KQLWVK+LREVIQET
Sbjct: 1500 KNKLMTSELGVTEHMEGDECKFAVWTGRAPISDYRIVLRASSLETKQLWVKKLREVIQET 1559

Query: 62   YFSSALPLAAPPKSPAKLKSRSNQP-------NMEDE--DNCDRGSLASYGSGNTTDSDK 112
            YFS ALPL+  PKSPAKLK  S +        N  DE  +N DR SL S+GSGNTTDSDK
Sbjct: 1560 YFSGALPLSL-PKSPAKLKPHSQRSSRDLEECNSLDESVENLDRNSLTSFGSGNTTDSDK 1618

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242007895|ref|XP_002424753.1| Huntingtin-associated protein-interacting protein, putative [Pediculus humanus corporis] gi|212508256|gb|EEB12015.1| Huntingtin-associated protein-interacting protein, putative [Pediculus humanus corporis]

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 86/124 (69%), Positives = 100/124 (80%), Gaps = 8/124 (6%)

Query: 2    KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
            K +LMTSELGVTEHIEGDECKFAVWTGRAPISD RI+LKAS L+ KQ WVK+LREVIQET
Sbjct: 1435 KNKLMTSELGVTEHIEGDECKFAVWTGRAPISDYRIVLKASCLDVKQTWVKKLREVIQET 1494

Query: 62   YFSSALPLAAPPKSPAKLKSRSNQ---PNMED----EDNCDRGSLASYGSGNTTDSDKAS 114
            YFS+ALPL+  PKSPAK KS S+Q    +MED    ++N +R S+AS+ SGNTTDSDK  
Sbjct: 1495 YFSTALPLSL-PKSPAKGKSGSSQRSSRDMEDNGSLDENAERVSVASFSSGNTTDSDKRC 1553

Query: 115  SLEA 118
             + A
Sbjct: 1554 QMMA 1557

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340715586|ref|XP_003396292.1| PREDICTED: triple functional domain protein-like [Bombus terrestris]

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/130 (62%), Positives = 92/130 (70%), Gaps = 15/130 (11%)

Query: 2    KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
            K RLMTSELGVTEHIEGDECKFAVWTGRAP SD R++L+A+S++AKQLWVKRLREVIQET
Sbjct: 1526 KSRLMTSELGVTEHIEGDECKFAVWTGRAPTSDTRVVLRANSMDAKQLWVKRLREVIQET 1585

Query: 62   YFSSALPLAAPPKSPAKLKSRSNQPNMEDE--------DNCDRGSLASYGSGNTTDSDKA 113
            YFS ++     PKSPAK  S        +E        +N DR SLAS+GS NTTDSDK 
Sbjct: 1586 YFSLSM-----PKSPAKKSSSQRSSRDLEECASLDDSVENLDRNSLASFGSTNTTDSDKT 1640

Query: 114  SSLEAKQLWV 123
               E    WV
Sbjct: 1641 GVAEVT--WV 1648

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350396743|ref|XP_003484649.1| PREDICTED: triple functional domain protein-like [Bombus impatiens]

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/130 (62%), Positives = 92/130 (70%), Gaps = 15/130 (11%)

Query: 2    KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
            K RLMTSELGVTEHIEGDECKFAVWTGRAP SD R++L+A+S++AKQLWVKRLREVIQET
Sbjct: 1526 KSRLMTSELGVTEHIEGDECKFAVWTGRAPTSDTRVVLRANSMDAKQLWVKRLREVIQET 1585

Query: 62   YFSSALPLAAPPKSPAKLKSRSNQPNMEDE--------DNCDRGSLASYGSGNTTDSDKA 113
            YFS ++     PKSPAK  S        +E        +N DR SLAS+GS NTTDSDK 
Sbjct: 1586 YFSLSM-----PKSPAKKSSSQRSSRDLEECASLDDSVENLDRNSLASFGSTNTTDSDKT 1640

Query: 114  SSLEAKQLWV 123
               E    WV
Sbjct: 1641 GVAEVT--WV 1648

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328789247|ref|XP_003251251.1| PREDICTED: triple functional domain protein [Apis mellifera]

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/130 (62%), Positives = 92/130 (70%), Gaps = 15/130 (11%)

Query: 2    KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
            K RLMTSELGVTEHIEGDECKFAVWTGRAP SD R++L+A+S++AKQLWVKRLREVIQET
Sbjct: 1525 KSRLMTSELGVTEHIEGDECKFAVWTGRAPTSDTRVVLRANSMDAKQLWVKRLREVIQET 1584

Query: 62   YFSSALPLAAPPKSPAKLKSRSNQPNMEDE--------DNCDRGSLASYGSGNTTDSDKA 113
            YFS ++     PKSPAK  S        +E        +N DR SLAS+GS NTTDSDK 
Sbjct: 1585 YFSLSM-----PKSPAKKSSSQRSSRDLEECTSLDDSVENLDRNSLASFGSTNTTDSDKT 1639

Query: 114  SSLEAKQLWV 123
               E    WV
Sbjct: 1640 GVAEVT--WV 1647

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	227
FB|FBgn0024277	2263	trio "trio" [Drosophila melano	0.528	0.053	0.527	5e-27
ZFIN|ZDB-GENE-100921-4	1612	kalrna "kalirin, RhoGEF kinase	0.497	0.070	0.455	2.4e-19
UNIPROTKB|I3L9H1	528	LOC100737382 "Uncharacterized	0.497	0.214	0.459	3.5e-19
UNIPROTKB|F1PUI1	2201	KALRN "Uncharacterized protein	0.497	0.051	0.447	5.1e-19
UNIPROTKB|F1MXJ6	2941	KALRN "Uncharacterized protein	0.497	0.038	0.447	9.7e-19
UNIPROTKB|F1PPJ4	2945	KALRN "Uncharacterized protein	0.497	0.038	0.447	9.7e-19
UNIPROTKB|H7BXZ5	2955	KALRN "Kalirin" [Homo sapiens	0.497	0.038	0.447	1.2e-18
UNIPROTKB|O60229	2985	KALRN "Kalirin" [Homo sapiens	0.497	0.037	0.447	1.3e-18
UNIPROTKB|J3QSW6	2986	KALRN "Kalirin" [Homo sapiens	0.497	0.037	0.447	1.3e-18
UNIPROTKB|I3L821	1406	KALRN "Uncharacterized protein	0.506	0.081	0.448	1.8e-18

FB|FBgn0024277 trio "trio" [Drosophila melanogaster (taxid:7227)]

 Score = 320 (117.7 bits), Expect = 5.0e-27, P = 5.0e-27
 Identities = 67/127 (52%), Positives = 89/127 (70%)

Query:     2 KGRLMTSELGVTEHIEGDECKFAVWTGRAP-ISDCRILLKASSLEAKQLWVKRLREVIQE 60
             K +LMT+++G+TEHIEGDE KFAVWTGR+P +SDCRI+LKA+SLE KQ+WVK+LREV+QE
Sbjct:  1523 KSKLMTTDMGITEHIEGDETKFAVWTGRSPMLSDCRIVLKATSLETKQIWVKKLREVMQE 1582

Query:    61 TYFXXXXXXXXXXXXXXXXXXRSNQPNMED---EDNCDRGSLASYGSGNTTDSD-KASSL 116
             T F                  + +  ++++   E++ DR SLAS+GSGNTTDSD K  + 
Sbjct:  1583 TCFSGTSLTLPKSPAKHSGSSQRSSRDLDEQLTENDHDRCSLASFGSGNTTDSDNKLGNQ 1642

Query:   117 EAKQLWV 123
             EA   WV
Sbjct:  1643 EAT--WV 1647

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=ISS;IDA;NAS

GO:0007422 "peripheral nervous system development" evidence=IGI;IMP

GO:0007411 "axon guidance" evidence=IGI;IMP;TAS

GO:0007417 "central nervous system development" evidence=IGI;IMP

GO:0030036 "actin cytoskeleton organization" evidence=IEP;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007266 "Rho protein signal transduction" evidence=IDA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0050770 "regulation of axonogenesis" evidence=IGI

GO:0016319 "mushroom body development" evidence=IMP

GO:0048675 "axon extension" evidence=IMP

GO:0045887 "positive regulation of synaptic growth at neuromuscular junction" evidence=IMP

GO:0071772 "response to BMP stimulus" evidence=IGI

GO:0007412 "axon target recognition" evidence=IGI

GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IMP

GO:0046331 "lateral inhibition" evidence=IMP

ZFIN|ZDB-GENE-100921-4 kalrna "kalirin, RhoGEF kinase a" [Danio rerio (taxid:7955)]

 Score = 235 (87.8 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
 Identities = 56/123 (45%), Positives = 68/123 (55%)

Query:     2 KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
             K +L+TSELGVTEH+EGD CKFA+W GR P SD + +LKASS+E KQ W+K +REVIQE 
Sbjct:   678 KNKLLTSELGVTEHVEGDPCKFALWVGRTPSSDNKTVLKASSIEVKQEWIKNIREVIQER 737

Query:    62 YFXXXXXXXXXXXXXXXXXX-RSNQPNMEDEDNCDRG---------SLASYGSGNTTDSD 111
                                  R+N      ED   +G         S+AS  S NT DSD
Sbjct:   738 IIHLKGALKEPIHIPKTPAKPRNNSKRDAGEDADSQGDGSSQPDTISIASRTSQNTVDSD 797

Query:   112 KAS 114
             K S
Sbjct:   798 KLS 800

GO:0005543 "phospholipid binding" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

UNIPROTKB|I3L9H1 LOC100737382 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 237 (88.5 bits), Expect = 3.5e-19, P = 3.5e-19
 Identities = 56/122 (45%), Positives = 70/122 (57%)

Query:     2 KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE- 60
             K +L TSELGVTEH+EGD CKFA+W GR P SD +I+LKASS+E KQ W+K +REVIQE 
Sbjct:   300 KSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQER 359

Query:    61 -TYFXXXXXXXXXXXXXXXXXXRSNQPNMEDEDNCDRGS-------LASYGSGNTTDSDK 112
               +                   +  + + ED D+   GS       +AS  S NT DSDK
Sbjct:   360 TVHLKGALKEPIHIPKTAPATRQKGRRDGEDLDSQGDGSSQPDTISIASRTSQNTLDSDK 419

Query:   113 AS 114
              S
Sbjct:   420 LS 421

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

UNIPROTKB|F1PUI1 KALRN "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 237 (88.5 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
 Identities = 55/123 (44%), Positives = 71/123 (57%)

Query:     2 KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
             K +L+TSELGVTEH+EGD CKFA+W+GR P SD + +LKAS++E KQ W+K +REVIQE 
Sbjct:   737 KNKLLTSELGVTEHVEGDPCKFALWSGRTPSSDNKTVLKASNIETKQEWIKNIREVIQER 796

Query:    62 YFXXXXXXXXXXXXXXXXXXRSN---QPNMEDEDNCDRGS-------LASYGSGNTTDSD 111
                                 + N   +  +ED D+   GS       +AS  S NT DSD
Sbjct:   797 IIHLKGALKEPIQLPKTPAKQRNNSKRDGVEDVDSQGDGSSQPDTISIASRTSQNTVDSD 856

Query:   112 KAS 114
             K S
Sbjct:   857 KLS 859

GO:0005524 "ATP binding" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|F1MXJ6 KALRN "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 237 (88.5 bits), Expect = 9.7e-19, Sum P(2) = 9.7e-19
 Identities = 55/123 (44%), Positives = 71/123 (57%)

Query:     2 KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
             K +L+TSELGVTEH+EGD CKFA+W+GR P SD + +LKAS++E KQ W+K +REVIQE 
Sbjct:  1479 KNKLLTSELGVTEHVEGDPCKFALWSGRTPSSDNKTVLKASNIETKQEWIKNIREVIQER 1538

Query:    62 YFXXXXXXXXXXXXXXXXXXRSN---QPNMEDEDNCDRGS-------LASYGSGNTTDSD 111
                                 + N   +  +ED D+   GS       +AS  S NT DSD
Sbjct:  1539 IIHLKGALKEPIQLPKTPAKQRNNSKRDGVEDVDSQGDGSSQPDTISIASRTSQNTADSD 1598

Query:   112 KAS 114
             K S
Sbjct:  1599 KLS 1601

GO:0005524 "ATP binding" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|F1PPJ4 KALRN "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 237 (88.5 bits), Expect = 9.7e-19, Sum P(2) = 9.7e-19
 Identities = 55/123 (44%), Positives = 71/123 (57%)

Query:     2 KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
             K +L+TSELGVTEH+EGD CKFA+W+GR P SD + +LKAS++E KQ W+K +REVIQE 
Sbjct:  1514 KNKLLTSELGVTEHVEGDPCKFALWSGRTPSSDNKTVLKASNIETKQEWIKNIREVIQER 1573

Query:    62 YFXXXXXXXXXXXXXXXXXXRSN---QPNMEDEDNCDRGS-------LASYGSGNTTDSD 111
                                 + N   +  +ED D+   GS       +AS  S NT DSD
Sbjct:  1574 IIHLKGALKEPIQLPKTPAKQRNNSKRDGVEDVDSQGDGSSQPDTISIASRTSQNTVDSD 1633

Query:   112 KAS 114
             K S
Sbjct:  1634 KLS 1636

GO:0005524 "ATP binding" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|H7BXZ5 KALRN "Kalirin" [Homo sapiens (taxid:9606)]

 Score = 236 (88.1 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
 Identities = 55/123 (44%), Positives = 71/123 (57%)

Query:     2 KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
             K +L+TSELGVTEH+EGD CKFA+W+GR P SD + +LKAS++E KQ W+K +REVIQE 
Sbjct:  1492 KNKLLTSELGVTEHVEGDPCKFALWSGRTPSSDNKTVLKASNIETKQEWIKNIREVIQER 1551

Query:    62 YFXXXXXXXXXXXXXXXXXXRSN---QPNMEDEDNCDRGS-------LASYGSGNTTDSD 111
                                 + N   +  +ED D+   GS       +AS  S NT DSD
Sbjct:  1552 IIHLKGALKEPLQLPKTPAKQRNNSKRDGVEDIDSQGDGSSQPDTISIASRTSQNTVDSD 1611

Query:   112 KAS 114
             K S
Sbjct:  1612 KLS 1614

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|O60229 KALRN "Kalirin" [Homo sapiens (taxid:9606)]

 Score = 236 (88.1 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
 Identities = 55/123 (44%), Positives = 71/123 (57%)

Query:     2 KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
             K +L+TSELGVTEH+EGD CKFA+W+GR P SD + +LKAS++E KQ W+K +REVIQE 
Sbjct:  1523 KNKLLTSELGVTEHVEGDPCKFALWSGRTPSSDNKTVLKASNIETKQEWIKNIREVIQER 1582

Query:    62 YFXXXXXXXXXXXXXXXXXXRSN---QPNMEDEDNCDRGS-------LASYGSGNTTDSD 111
                                 + N   +  +ED D+   GS       +AS  S NT DSD
Sbjct:  1583 IIHLKGALKEPLQLPKTPAKQRNNSKRDGVEDIDSQGDGSSQPDTISIASRTSQNTVDSD 1642

Query:   112 KAS 114
             K S
Sbjct:  1643 KLS 1645

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=TAS

GO:0007165 "signal transduction" evidence=TAS

GO:0016192 "vesicle-mediated transport" evidence=TAS

GO:0015629 "actin cytoskeleton" evidence=TAS

GO:0006468 "protein phosphorylation" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006915 "apoptotic process" evidence=TAS

GO:0007264 "small GTPase mediated signal transduction" evidence=TAS

GO:0048011 "neurotrophin TRK receptor signaling pathway" evidence=TAS

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=TAS

GO:0035556 "intracellular signal transduction" evidence=ISS

GO:0007399 "nervous system development" evidence=ISS

UNIPROTKB|J3QSW6 KALRN "Kalirin" [Homo sapiens (taxid:9606)]

 Score = 236 (88.1 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
 Identities = 55/123 (44%), Positives = 71/123 (57%)

Query:     2 KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
             K +L+TSELGVTEH+EGD CKFA+W+GR P SD + +LKAS++E KQ W+K +REVIQE 
Sbjct:  1523 KNKLLTSELGVTEHVEGDPCKFALWSGRTPSSDNKTVLKASNIETKQEWIKNIREVIQER 1582

Query:    62 YFXXXXXXXXXXXXXXXXXXRSN---QPNMEDEDNCDRGS-------LASYGSGNTTDSD 111
                                 + N   +  +ED D+   GS       +AS  S NT DSD
Sbjct:  1583 IIHLKGALKEPLQLPKTPAKQRNNSKRDGVEDIDSQGDGSSQPDTISIASRTSQNTVDSD 1642

Query:   112 KAS 114
             K S
Sbjct:  1643 KLS 1645

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|I3L821 KALRN "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 237 (88.5 bits), Expect = 1.8e-18, P = 1.8e-18
 Identities = 56/125 (44%), Positives = 73/125 (58%)

Query:     2 KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
             K +L+TSELGVTEH+EGD CKFA+W+GR P SD + +LKAS++E KQ W+K +REVIQE 
Sbjct:  1266 KNKLLTSELGVTEHVEGDPCKFALWSGRTPSSDNKTVLKASNIETKQEWIKNIREVIQER 1325

Query:    62 YFXXXXXXXXXXXXXXX-XXXRSN--QPNMEDEDNCDRGS-------LASYGSGNTTDSD 111
                                  R+N  +  +ED D+   GS       +AS  S NT DSD
Sbjct:  1326 IIHLKGALKEPIQLPKTPAKLRNNSKRDGVEDVDSQGDGSSQPDTISIASRTSQNTVDSD 1385

Query:   112 KASSL 116
             K  +L
Sbjct:  1386 KDGNL 1390

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O60229	KALRN_HUMAN	2, ., 7, ., 1, 1, ., 1	0.5040	0.4977	0.0378	yes	N/A
P97924	KALRN_RAT	2, ., 7, ., 1, 1, ., 1	0.5040	0.4977	0.0381	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	227
cd13240	123	cd13240, PH1_Kalirin_Trio_like, Triple functional	3e-35
cd01227	132	cd01227, PH_Dbs, DBL's big sister protein pleckstr	2e-07
cd13239	125	cd13239, PH_Obscurin, Obscurin pleckstrin homology	2e-07
cd13240	123	cd13240, PH1_Kalirin_Trio_like, Triple functional	3e-07
cd13240	123	cd13240, PH1_Kalirin_Trio_like, Triple functional	5e-06
cd13242	136	cd13242, PH_puratrophin-1, Puratrophin-1 pleckstri	1e-04
cd13241	140	cd13241, PH2_Kalirin_Trio_p63RhoGEF, p63RhoGEF ple	1e-04

>gnl|CDD|241394 cd13240, PH1_Kalirin_Trio_like, Triple functional domain pleckstrin homology pleckstrin homology (PH) domain, repeat 1

 Score =  121 bits (305), Expect = 3e-35
 Identities = 47/61 (77%), Positives = 52/61 (85%)

Query: 2   KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
           K +LMTSELGVTEHIEGD CKFA+WTGR P SD +I+LKASSLE KQ WVK+LREVIQE 
Sbjct: 63  KSKLMTSELGVTEHIEGDPCKFALWTGRVPTSDNKIVLKASSLEVKQEWVKKLREVIQER 122

Query: 62  Y 62
            
Sbjct: 123 I 123

RhoGEFs, Kalirin and Trio, the mammalian homologs of Drosophila Trio and Caenorhabditis elegans UNC-73 regulate a novel step in secretory granule maturation. Their signaling modulates the extent to which regulated cargo enter and remain in the regulated secretory pathway. This allows for fine tuning of peptides released by a single secretory cell type with impaired signaling leading to pathological states. Trio plays an essential role in regulating the actin cytoskeleton during axonal guidance and branching. Kalirin and Trio are encoded by separate genes in mammals and by a single one in invertebrates. Kalirin and Trio share the same complex multidomain structure and display several splice variants. The longest Kalirin and Trio proteins have a Sec14 domain, a stretch of spectrin repeats, a RhoGEF(DH)/PH cassette (also called GEF1), an SH3 domain, a second RhoGEF(DH)/PH cassette (also called GEF2), a second SH3 domain, Ig/FNIII domains, and a kinase domain. The first RhoGEF(DH)/PH cassette catalyzes exchange on Rac1 and RhoG while the second RhoGEF(DH)/PH cassette is specific for RhoA. Kalirin and Trio are closely related to p63RhoGEF and have PH domains of similar function. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, cytoskeletal associated molecules, and in lipid associated enzymes. Length = 123

>gnl|CDD|241261 cd01227, PH_Dbs, DBL's big sister protein pleckstrin homology (PH) domain

 Score = 48.4 bits (115), Expect = 2e-07
 Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)

Query: 2   KGRLMTSELGVTEHIEGDECKFAVW-TGRAPISDCRILLKASSLEAKQLWVKRLREVI 58
           K  L  S +G+TE+++GD  KF +W  GR  +     +++A + E K  WV  +R+V+
Sbjct: 76  KNSLKMSAVGITENVKGDNKKFEIWYNGREEV----YIIQAPTPEIKAAWVNEIRKVL 129

Dbs (also called MCF2-transforming sequence-like protein 2) is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 132

>gnl|CDD|241393 cd13239, PH_Obscurin, Obscurin pleckstrin homology (PH) domain

 Score = 48.2 bits (115), Expect = 2e-07
 Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 2   KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
           K ++  +++ V + +EGD+  F +W  R   S  +  L+A ++  K  WVK +R++ Q T
Sbjct: 67  KNKMKLNDIDVNDTVEGDDRAFELWHER-EDSVRKYTLQARTIIVKNSWVKEIRDIQQRT 125

Obscurin (also called Obscurin-RhoGEF; Obscurin-myosin light chain kinase/Obscurin-MLCK) is a giant muscle protein that is concentrated at the peripheries of Z-disks and M-lines. It binds small ankyrin I, a component of the sarcoplasmic reticulum (SR) membrane. It is associated with the contractile apparatus through binding with titin and sarcomeric myosin. It plays important roles in the organization and assembly of the myofibril and the SR. Obscurin has been observed as alternatively-spliced isoforms. The major isoform in sleletal muscle, approximately 800 kDa in size, is composed of many adhesion modules and signaling domains. It harbors 49 Ig and 2 FNIII repeats at the N-terminues, a complex middle region with additional Ig domains, an IQ motif, and a conserved SH3 domain near RhoGEF and PH domains, and a non-modular C-terminus with phosphorylation motifs. The obscurin gene also encodes two kinase domains, which are not part of the 800 kDa form of the protein, but is part of smaller spliced products that present in heart muscle. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 125

>gnl|CDD|241394 cd13240, PH1_Kalirin_Trio_like, Triple functional domain pleckstrin homology pleckstrin homology (PH) domain, repeat 1

 Score = 47.3 bits (113), Expect = 3e-07
 Identities = 21/36 (58%), Positives = 23/36 (63%), Gaps = 5/36 (13%)

Query: 104 SGNTTDSD-----KASSLEAKQLWVKRLREVIQETY 134
           +G    SD     KASSLE KQ WVK+LREVIQE  
Sbjct: 88  TGRVPTSDNKIVLKASSLEVKQEWVKKLREVIQERI 123

RhoGEFs, Kalirin and Trio, the mammalian homologs of Drosophila Trio and Caenorhabditis elegans UNC-73 regulate a novel step in secretory granule maturation. Their signaling modulates the extent to which regulated cargo enter and remain in the regulated secretory pathway. This allows for fine tuning of peptides released by a single secretory cell type with impaired signaling leading to pathological states. Trio plays an essential role in regulating the actin cytoskeleton during axonal guidance and branching. Kalirin and Trio are encoded by separate genes in mammals and by a single one in invertebrates. Kalirin and Trio share the same complex multidomain structure and display several splice variants. The longest Kalirin and Trio proteins have a Sec14 domain, a stretch of spectrin repeats, a RhoGEF(DH)/PH cassette (also called GEF1), an SH3 domain, a second RhoGEF(DH)/PH cassette (also called GEF2), a second SH3 domain, Ig/FNIII domains, and a kinase domain. The first RhoGEF(DH)/PH cassette catalyzes exchange on Rac1 and RhoG while the second RhoGEF(DH)/PH cassette is specific for RhoA. Kalirin and Trio are closely related to p63RhoGEF and have PH domains of similar function. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, cytoskeletal associated molecules, and in lipid associated enzymes. Length = 123

>gnl|CDD|241394 cd13240, PH1_Kalirin_Trio_like, Triple functional domain pleckstrin homology pleckstrin homology (PH) domain, repeat 1

 Score = 44.2 bits (105), Expect = 5e-06
 Identities = 17/22 (77%), Positives = 18/22 (81%)

Query: 151 ASSLEAKQLWVKRLREVIQETY 172
           ASSLE KQ WVK+LREVIQE  
Sbjct: 102 ASSLEVKQEWVKKLREVIQERI 123

RhoGEFs, Kalirin and Trio, the mammalian homologs of Drosophila Trio and Caenorhabditis elegans UNC-73 regulate a novel step in secretory granule maturation. Their signaling modulates the extent to which regulated cargo enter and remain in the regulated secretory pathway. This allows for fine tuning of peptides released by a single secretory cell type with impaired signaling leading to pathological states. Trio plays an essential role in regulating the actin cytoskeleton during axonal guidance and branching. Kalirin and Trio are encoded by separate genes in mammals and by a single one in invertebrates. Kalirin and Trio share the same complex multidomain structure and display several splice variants. The longest Kalirin and Trio proteins have a Sec14 domain, a stretch of spectrin repeats, a RhoGEF(DH)/PH cassette (also called GEF1), an SH3 domain, a second RhoGEF(DH)/PH cassette (also called GEF2), a second SH3 domain, Ig/FNIII domains, and a kinase domain. The first RhoGEF(DH)/PH cassette catalyzes exchange on Rac1 and RhoG while the second RhoGEF(DH)/PH cassette is specific for RhoA. Kalirin and Trio are closely related to p63RhoGEF and have PH domains of similar function. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, cytoskeletal associated molecules, and in lipid associated enzymes. Length = 123

>gnl|CDD|241396 cd13242, PH_puratrophin-1, Puratrophin-1 pleckstrin homology (PH) domain

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 3/51 (5%)

Query: 2   KGRLMTSELGVTEHIEGDE-CKFAVWTGRAPISDCRILLKASSLEAKQLWV 51
           K  + T+++G+TE++ GD   KF +W  R    D   +L+A+S E K+ W 
Sbjct: 73  KHSIKTADIGLTENV-GDSGLKFEIWFRRRKSRDT-YILQATSPEIKEAWT 121

Puratrophin-1 (also called Purkinje cell atrophy-associated protein 1 or PLEKHG4/Pleckstrin homology domain-containing family G member 4) contains a spectrin repeat, a RhoGEF (DH) domain, and a PH domain. It is thought to function in intracellular signaling and cytoskeleton dynamics at the Golgi. Puratrophin-1 is expressed in kidney, Leydig cells in the testis, epithelial cells in the prostate gland and Langerhans islet in the pancreas. A single nucleotide substitution in the puratrophin-1 gene were once thought to result in autosomal dominant cerebellar ataxia (ADCA), but now it has been demonstrated that this ataxia is a result of defects in the BEAN gene. Puratrophin contains a domain architecture similar to that of Dbl family members Dbs and Trio. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a RhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. Trio plays an essential role in regulating the actin cytoskeleton during axonal guidance and branching. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 136

>gnl|CDD|241395 cd13241, PH2_Kalirin_Trio_p63RhoGEF, p63RhoGEF pleckstrin homology (PH) domain, repeat 2

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 14/58 (24%), Positives = 32/58 (55%)

Query: 2   KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ 59
           K  +  +++ + E+++GD C+FA+ +          +L+A S E +Q WV  + +++ 
Sbjct: 68  KNSIKVNKMSLEENVDGDPCRFALRSRDPNKPGESFVLQAPSPEIRQEWVDTINQILD 125

The guanine nucleotide exchange factor p63RhoGEF is an effector of the heterotrimeric G protein, Galphaq and linking Galphaq-coupled receptors (GPCRs) to the activation of RhoA. The Dbl(DH) and PH domains of p63RhoGEF interact with the effector-binding site and the C-terminal region of Galphaq and appear to relieve autoinhibition of the catalytic DH domain by the PH domain. Trio, Duet, and p63RhoGEF are shown to constitute a family of Galphaq effectors that appear to activate RhoA both in vitro and in intact cells. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. Trio plays an essential role in regulating the actin cytoskeleton during axonal guidance and branching. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 140

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	227
KOG4240|consensus	1025		99.89
cd01232	114	PH_TRIO Trio pleckstrin homology (PH) domain. Trio	99.83
cd01227	133	PH_Dbs Dbs (DBL's big sister) pleckstrin homology	99.82
cd01222	97	PH_clg Clg (common-site lymphoma/leukemia guanine	99.4
KOG0689|consensus	448		99.34
KOG4240|consensus	1025		99.19
cd01219	101	PH_FGD FGD (faciogenital dysplasia protein) plecks	96.8
cd01220	99	PH_CDEP Chondrocyte-derived ezrin-like domain cont	96.63
cd01261	112	PH_SOS Son of Sevenless (SOS) Pleckstrin homology	96.51
cd01232	114	PH_TRIO Trio pleckstrin homology (PH) domain. Trio	96.46
smart00233	102	PH Pleckstrin homology domain. Domain commonly fou	96.14
cd01247	91	PH_GPBP Goodpasture antigen binding protein (GPBP)	95.96
PF00169	104	PH: PH domain; InterPro: IPR001849 The pleckstrin	95.8
cd01265	95	PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain	95.6
cd01227	133	PH_Dbs Dbs (DBL's big sister) pleckstrin homology	95.32
cd01223	116	PH_Vav Vav pleckstrin homology (PH) domain. Vav pl	95.27
cd01218	104	PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain	95.22
cd01233	100	Unc104 Unc-104 pleckstrin homology (PH) domain. Un	95.13
cd01222	97	PH_clg Clg (common-site lymphoma/leukemia guanine	94.97
cd00821	96	PH Pleckstrin homology (PH) domain. Pleckstrin hom	94.95
cd01238	106	PH_Tec Tec pleckstrin homology (PH) domain. Tec pl	94.57
cd01246	91	PH_oxysterol_bp Oxysterol binding protein (OSBP) P	94.48
cd01244	98	PH_RasGAP_CG9209 RAS_GTPase activating protein (GA	94.16
cd01251	103	PH_centaurin_alpha Centaurin alpha Pleckstrin homo	93.58
cd01264	101	PH_melted Melted pleckstrin homology (PH) domain.	93.25
PF00018	48	SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Ho	93.23
PF14604	49	SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3	92.62
cd01252	125	PH_cytohesin Cytohesin Pleckstrin homology (PH) do	92.46
cd01266	108	PH_Gab Gab (Grb2-associated binder) pleckstrin hom	92.2
cd00900	99	PH-like Pleckstrin homology-like domain. Pleckstri	92.12
cd01235	101	PH_SETbf Set binding factor Pleckstrin Homology (P	91.95
cd01250	94	PH_centaurin Centaurin Pleckstrin homology (PH) do	91.57
cd01253	104	PH_beta_spectrin Beta-spectrin pleckstrin homology	90.74
PF07653	55	SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3	89.78
PF15405	135	PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.	89.54
cd01245	98	PH_RasGAP_CG5898 RAS GTPase-activating protein (GA	89.05
cd01260	96	PH_CNK Connector enhancer of KSR (Kinase suppresso	88.08
smart00326	58	SH3 Src homology 3 domains. Src homology 3 (SH3) d	86.86
cd01224	109	PH_Collybistin Collybistin pleckstrin homology (PH	86.57
cd00174	54	SH3 Src homology 3 domains; SH3 domains bind to pr	86.31
PF15409	89	PH_8: Pleckstrin homology domain	85.99
KOG3518|consensus	521		84.31
cd01255	160	PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM	81.81
cd01249	104	PH_oligophrenin Oligophrenin Pleckstrin homology (	81.69
cd01230	117	PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6	81.44

>KOG4240|consensus

Probab=99.89  E-value=6.4e-24  Score=216.09  Aligned_cols=131  Identities=37%  Similarity=0.476  Sum_probs=118.4

Q ss_pred             CCCccccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh--ccccCCCCCCCCCCccc
Q psy12865          1 MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET--YFSSALPLAAPPKSPAK   78 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q--~l~~alp~~~~~ks~~~   78 (227)
                      ||++++|+++||||||+||+|||+||.|+.+.   .|+|||+++++|+.|+++||+++++|  .+.+.-|.. .++++.+
T Consensus       874 ~~~~l~~~e~gite~v~Gd~~kf~~~~g~~~~---~~~~~a~~~~~K~~W~~~ir~~~~~~~~~~~~~~~~~-~~~~~~~  949 (1025)
T KOG4240|consen  874 SKKKLPMSEVGITEHVEGDPCKFELWVGRTES---VIDLKASNHETKQKWVKEIREVLQERTILLKGKEQAQ-ALETLDK  949 (1025)
T ss_pred             hhccCCHHhhcchhhcccCceEEEEeccCCCc---ceeeecCCcchhhhhccchHHHHHHHHHHhhhhhhhh-ccccccc
Confidence            57779999999999999999999999999765   79999999999999999999999999  455533777 7777778


Q ss_pred             cccCCCCCC-------CCCCCCCcccceeecCCCCCCCcccccc---chhccccc--ceEEEEecceEEEecCCCCCC
Q psy12865         79 LKSRSNQPN-------MEDEDNCDRGSLASYGSGNTTDSDKASS---LEAKQLWV--KRLREVIQETYFSSALPLAAP  144 (227)
Q Consensus        79 ~~~~s~r~~-------~~~~s~~d~~sl~s~~s~n~~ds~k~~~---v~~d~~a~--~elsv~~gqtve~le~~~~~p  144 (227)
                      .++.++|++       ++..+||+|+++++|+|+|++||++.+.   |.+||.++  +||         ++|+|+..|
T Consensus       950 ~~~~~~~~~~~~~~~~~~~~sq~~~~~~~~r~~~~~~~s~~~~~~~~~~~~~~~s~~~~l---------~~~~~~~~~ 1018 (1025)
T KOG4240|consen  950 ARSKLPRSGAEDLGSQGNFSSQPETISIASRTSVNSCDSEKSSEVTIVTADFDTSVSAEL---------IVERPHTDP 1018 (1025)
T ss_pred             cccCCCCCchhccccccccccCCchhcccccccccccccccCCCcceeccCCccCcchhh---------ccccCCCCC
Confidence            999999998       4678999999999999999999999887   99999999  788         999999988

>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain

Probab=99.83  E-value=5.3e-21  Score=153.00  Aligned_cols=60  Identities=58%  Similarity=1.079  Sum_probs=57.4

Q ss_pred             CCCccccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865          1 MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      ||++|||++|||||+|+||+|||+||+++++.++++|||||+|+++|++|+++|++||++
T Consensus        55 yK~~ikls~l~l~e~v~gd~~kF~i~~~~~~~~~~~~ilqA~s~e~K~~W~~~I~~il~~  114 (114)
T cd01232          55 YKSKLQVSKMGLTEHVEGDPCRFALWSGDPPISDNRIILKANSQETKQEWVKKIREILQE  114 (114)
T ss_pred             EecceeeeeeEeEEccCCCCceEEEEeCCCCCCceEEEEECCCHHHHHHHHHHHHHHhhC
Confidence            899999999999999999999999999998767899999999999999999999999974

Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain

Probab=99.82  E-value=1.2e-20  Score=154.87  Aligned_cols=58  Identities=31%  Similarity=0.628  Sum_probs=55.8

Q ss_pred             CCCccccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865          1 MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ||++|||++|||||+|+||+||||||++++   .++|||||+|+|+|++|+++|++||++|
T Consensus        61 yK~~ikls~lglte~v~gd~~kFeiw~~~~---~~~yilqA~t~e~K~~Wv~~I~~iL~~Q  118 (133)
T cd01227          61 FKQSLKMTAVGITENVKGDTKKFEIWYNAR---EEVYILQAPTPEIKAAWVNEIRKVLTSQ  118 (133)
T ss_pred             EeeeEEeecccccccCCCCccEEEEEeCCC---CcEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999999999999884   4699999999999999999999999999

Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain

Probab=99.40  E-value=3.3e-13  Score=105.44  Aligned_cols=57  Identities=25%  Similarity=0.431  Sum_probs=52.6

Q ss_pred             CCCccccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865          1 MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      ||+.|++++++|+||+.+|||+|+||....|  +++|+|||+|+|.|+.|+++|+++|.
T Consensus        40 ~K~~i~~~~l~i~e~~~~d~~~F~v~~~~~p--~~~~~l~A~s~e~K~~W~~~i~~~i~   96 (97)
T cd01222          40 FKAYIPCKNLMLVEHLPGEPLCFRVIPFDDP--KGALQLTARNREEKRIWTQQLKRAML   96 (97)
T ss_pred             EEEEEEecceEEecCCCCCCcEEEEEecCCC--ceEEEEEecCHHHHHHHHHHHHHHhh
Confidence            7999999999999999999999999977643  46899999999999999999999975

Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>KOG0689|consensus

Probab=99.34  E-value=4.8e-13  Score=128.27  Aligned_cols=69  Identities=20%  Similarity=0.420  Sum_probs=63.2

Q ss_pred             CCCccccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh-ccccCC--CCC
Q psy12865          1 MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET-YFSSAL--PLA   70 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q-~l~~al--p~~   70 (227)
                      ||++|||+++|+++++.+++++|+||++++. ..++|+|||.+.++|++|+++|.++||.| .+.+++  |++
T Consensus       304 yk~~ik~~~lgle~n~~~s~~rF~i~~r~~~-~~~~~vlqa~s~~~k~~W~~~i~~~l~~Q~a~~n~~~~p~~  375 (448)
T KOG0689|consen  304 YKQHIKVNDLGLEENNDNSASRFEIWFRGRK-KREAYVLQAGSKEIKYAWTRAISSLLWQQKALLNKLVRPAR  375 (448)
T ss_pred             eecchhhhheeeeccCCCCCcchhhhhhccc-ccceeEEeeCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhHH
Confidence            8999999999999999999999999998864 35789999999999999999999999999 777776  555

>KOG4240|consensus

Probab=99.19  E-value=1.1e-11  Score=127.41  Aligned_cols=97  Identities=26%  Similarity=0.178  Sum_probs=76.6

Q ss_pred             EecceEEEecCCCCCCCCccccccchHHHHHHHHHHHHHHHhhhccCCC-CCCCCCCChhhhccCCCCCC---CC----C
Q psy12865        129 VIQETYFSSALPLAAPPKSPASASSLEAKQLWVKRLREVIQETYFSSAL-PLAAPPKSPAKLKSRSNQPN---ME----D  200 (227)
Q Consensus       129 ~~gqtve~le~~~~~p~k~vlKass~e~Kq~WVk~iREViQE~~l~~a~-~~~~~pksp~~~~~~~~~~~---~~----~  200 (227)
                      .+|+++++=-.....|+++++||++.++|+.|||+||+|+|+|.+.++. +++..|++..+.+++..+++   ..    -
T Consensus       889 v~Gd~~kf~~~~g~~~~~~~~~a~~~~~K~~W~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  968 (1025)
T KOG4240|consen  889 VEGDPCKFELWVGRTESVIDLKASNHETKQKWVKEIREVLQERTILLKGKEQAQALETLDKARSKLPRSGAEDLGSQGNF  968 (1025)
T ss_pred             cccCceEEEEeccCCCcceeeecCCcchhhhhccchHHHHHHHHHHhhhhhhhhccccccccccCCCCCchhcccccccc
Confidence            4677777777777788899999999999999999999999999754433 66777888766555433332   22    3


Q ss_pred             CCCCCceeeeecCcCCccCCCCCCC
Q psy12865        201 EDNCDRGSLASYGSGNTTDSDKPLT  225 (227)
Q Consensus       201 ~~~~d~~SlaSr~S~nt~DSdklsg  225 (227)
                      .++++|.|+++|+|+|++||++.++
T Consensus       969 ~sq~~~~~~~~r~~~~~~~s~~~~~  993 (1025)
T KOG4240|consen  969 SSQPETISIASRTSVNSCDSEKSSE  993 (1025)
T ss_pred             ccCCchhcccccccccccccccCCC
Confidence            5689999999999999999998765

>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain

Probab=96.80  E-value=0.0023  Score=49.38  Aligned_cols=52  Identities=23%  Similarity=0.256  Sum_probs=39.3

Q ss_pred             Cccccccccceeec-cCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865          3 GRLMTSELGVTEHI-EGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus         3 ~slk~s~lGltE~V-egD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      +.|.+..+-|.+.. ...+..|.|-...     .+|+|+|.|++.|..|+..|..++.
T Consensus        48 ~~i~l~~~~v~~~~~~~~~~~F~I~~~~-----rsf~l~A~s~eEk~~W~~ai~~~i~  100 (101)
T cd01219          48 ARIDVSGMQVCEGDNLERPHSFLVSGKQ-----RCLELQARTQKEKNDWVQAIFSIID  100 (101)
T ss_pred             EEEecccEEEEeCCCCCcCceEEEecCC-----cEEEEEcCCHHHHHHHHHHHHHHhh
Confidence            44556666666542 2357889995433     3699999999999999999999875

FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain

Probab=96.63  E-value=0.0039  Score=48.62  Aligned_cols=50  Identities=24%  Similarity=0.361  Sum_probs=36.9

Q ss_pred             cccccccceeecc--CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865          5 LMTSELGVTEHIE--GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus         5 lk~s~lGltE~Ve--gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      |.+..+-|.+.-.  +-+..|.|-....     .|+|+|+|++.|+.|+++|.+.++
T Consensus        47 i~L~~~~V~~~~~~~~~~~~F~I~~~~k-----s~~l~A~s~~Ek~~Wi~~i~~aI~   98 (99)
T cd01220          47 LPLRGMLTEESEHEWGVPHCFTIFGGQC-----AITVAASTRAEKEKWLADLSKAIA   98 (99)
T ss_pred             EEcCceEEeeccCCcCCceeEEEEcCCe-----EEEEECCCHHHHHHHHHHHHHHhh
Confidence            4455665544322  2368899985442     499999999999999999999875

Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain

Probab=96.51  E-value=0.0044  Score=49.79  Aligned_cols=55  Identities=15%  Similarity=0.356  Sum_probs=41.7

Q ss_pred             CCCccccccccceeeccCC--ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865          1 MKGRLMTSELGVTEHIEGD--ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD--~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      ||..|.|..+.|...-.++  ...|.|-.+..+    .|+|+|.|+|.|+.|+..|-.++.
T Consensus        54 ~k~~~~l~~~~V~d~~d~~~~knaF~I~~~~~~----s~~l~Akt~eeK~~Wm~~l~~~~~  110 (112)
T cd01261          54 LKEKFFMRKVDINDKPDSSEYKNAFEIILKDGN----SVIFSAKNAEEKNNWMAALISVQT  110 (112)
T ss_pred             EEEEEeeeeeEEEEcCCCcccCceEEEEcCCCC----EEEEEECCHHHHHHHHHHHHHHhc
Confidence            3455667777777655555  678999865422    499999999999999999987754

Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain

Probab=96.46  E-value=0.0027  Score=51.08  Aligned_cols=26  Identities=46%  Similarity=0.696  Sum_probs=23.8

Q ss_pred             CCccccccchHHHHHHHHHHHHHHHh
Q psy12865        145 PKSPASASSLEAKQLWVKRLREVIQE  170 (227)
Q Consensus       145 ~k~vlKass~e~Kq~WVk~iREViQE  170 (227)
                      .+.+|+|+|.|.|+.|+++||+++||
T Consensus        89 ~~~ilqA~s~e~K~~W~~~I~~il~~  114 (114)
T cd01232          89 NRIILKANSQETKQEWVKKIREILQE  114 (114)
T ss_pred             eEEEEECCCHHHHHHHHHHHHHHhhC
Confidence            46788999999999999999999985

Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>smart00233 PH Pleckstrin homology domain

Probab=96.14  E-value=0.019  Score=39.96  Aligned_cols=51  Identities=29%  Similarity=0.365  Sum_probs=40.5

Q ss_pred             ccccccccceeeccC----CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHH
Q psy12865          4 RLMTSELGVTEHIEG----DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVI   58 (227)
Q Consensus         4 slk~s~lGltE~Veg----D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL   58 (227)
                      .|.+.++.+....++    .+..|.|..+..    ..|+++|.|.+.++.|+..|+.++
T Consensus        47 ~i~l~~~~v~~~~~~~~~~~~~~f~l~~~~~----~~~~f~~~s~~~~~~W~~~i~~~~  101 (102)
T smart00233       47 SIDLSGITVREAPDPDSAKKPHCFEIKTADR----RSYLLQAESEEEREEWVDALRKAI  101 (102)
T ss_pred             EEECCcCEEEeCCCCccCCCceEEEEEecCC----ceEEEEcCCHHHHHHHHHHHHHhh
Confidence            455666666666664    588999997664    369999999999999999999875

Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.

>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain

Probab=95.96  E-value=0.014  Score=44.47  Aligned_cols=47  Identities=19%  Similarity=0.367  Sum_probs=33.8

Q ss_pred             cccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHH
Q psy12865          5 LMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLRE   56 (227)
Q Consensus         5 lk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Ire   56 (227)
                      |.|+...+..+ +.|+++|+|-....    .+|-|+|.|++.++.|++.|.+
T Consensus        44 I~L~~~~i~~~-~~~~~~F~i~~~~~----r~~~L~A~s~~e~~~Wi~al~~   90 (91)
T cd01247          44 IFLKKAIIAAH-EFDENRFDISVNEN----VVWYLRAENSQSRLLWMDSVVR   90 (91)
T ss_pred             EECcccEEEcC-CCCCCEEEEEeCCC----eEEEEEeCCHHHHHHHHHHHhh
Confidence            34444334433 56789999974331    3699999999999999998864

Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt

>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]

Probab=95.80  E-value=0.021  Score=40.86  Aligned_cols=50  Identities=18%  Similarity=0.280  Sum_probs=38.6

Q ss_pred             cccccccceeecc-------CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHH
Q psy12865          5 LMTSELGVTEHIE-------GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVI   58 (227)
Q Consensus         5 lk~s~lGltE~Ve-------gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL   58 (227)
                      |.+..+.+.+...       ..+..|+|-+...    .+|.|+|.|.+.++.|+..|+.++
T Consensus        47 i~l~~~~v~~~~~~~~~~~~~~~~~f~i~~~~~----~~~~~~~~s~~~~~~W~~~i~~~~  103 (104)
T PF00169_consen   47 IPLDDCTVRPDPSSDFLSNKKRKNCFEITTPNG----KSYLFSAESEEERKRWIQAIQKAI  103 (104)
T ss_dssp             EEGTTEEEEEETSSTSTSTSSSSSEEEEEETTS----EEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEecCceEEEcCccccccccCCCcEEEEEeCCC----cEEEEEcCCHHHHHHHHHHHHHHh
Confidence            4455555555444       4678899997664    469999999999999999999875

The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....

>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain

Probab=95.60  E-value=0.028  Score=42.87  Aligned_cols=47  Identities=23%  Similarity=0.277  Sum_probs=34.2

Q ss_pred             ccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHH
Q psy12865          6 MTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREV   57 (227)
Q Consensus         6 k~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Irei   57 (227)
                      .+....++......++.|+|-+..     ..|.|+|.|++.++.||+.|...
T Consensus        47 ~L~~~~~~~~~~~~~~~F~i~t~~-----r~y~l~A~s~~e~~~Wi~al~~~   93 (95)
T cd01265          47 DLSGAAFTYDPREEKGRFEIHSNN-----EVIALKASSDKQMNYWLQALQSK   93 (95)
T ss_pred             ECCccEEEcCCCCCCCEEEEEcCC-----cEEEEECCCHHHHHHHHHHHHhh
Confidence            344444444444448899997644     25999999999999999998764

PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain

Probab=95.32  E-value=0.014  Score=48.32  Aligned_cols=35  Identities=23%  Similarity=0.302  Sum_probs=29.7

Q ss_pred             CCCCccccccchHHHHHHHHHHHHHHHhhh--ccCCC
Q psy12865        143 APPKSPASASSLEAKQLWVKRLREVIQETY--FSSAL  177 (227)
Q Consensus       143 ~p~k~vlKass~e~Kq~WVk~iREViQE~~--l~~a~  177 (227)
                      ++.+.+|+|++.|.|+.|++.||+|++++.  ++|..
T Consensus        90 ~~~~yilqA~t~e~K~~Wv~~I~~iL~~Q~~~lk~~~  126 (133)
T cd01227          90 REEVYILQAPTPEIKAAWVNEIRKVLTSQLQACKEAS  126 (133)
T ss_pred             CCcEEEEEcCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            456788999999999999999999998773  66643

Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01223 PH_Vav Vav pleckstrin homology (PH) domain

Probab=95.27  E-value=0.041  Score=44.84  Aligned_cols=55  Identities=13%  Similarity=0.167  Sum_probs=41.9

Q ss_pred             CCCccccccccceeeccCCce------e--EEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHH
Q psy12865          1 MKGRLMTSELGVTEHIEGDEC------K--FAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVI   58 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~------k--FeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL   58 (227)
                      ||+.+.|.+++|+++...|+-      +  |.|-..+.   ...|+|.|-|+|.|..|+..|-.-+
T Consensus        49 ~Ke~~~l~~~~I~~~~~~d~~~~~~~~~~~f~L~~~~~---~~~~~f~~Ktee~K~kWm~al~~a~  111 (116)
T cd01223          49 YKDIHDLADYKIENNPSRDTEGRDTRWKYGFYLAHKQG---KTGFTFYFKTEHLRKKWLKALEMAM  111 (116)
T ss_pred             hHHhhhhheeeeEecCccCcccCCcceEEEEEEEecCC---CccEEEEeCCHHHHHHHHHHHHHHH
Confidence            789999999999998765553      3  34444432   2349999999999999999886554

Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain

Probab=95.22  E-value=0.048  Score=43.17  Aligned_cols=37  Identities=11%  Similarity=0.241  Sum_probs=30.6

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      +..|-|-....     .|+++|+|++.|..|+.+|.+.+..-
T Consensus        65 ~n~f~I~~~~k-----Sf~v~A~s~~eK~eWl~~i~~ai~~~  101 (104)
T cd01218          65 RNGWIIKTPTK-----SFAVYAATETEKREWMLHINKCVTDL  101 (104)
T ss_pred             cceEEEecCCe-----EEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence            46788876542     49999999999999999999987643

Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain

Probab=95.13  E-value=0.046  Score=41.92  Aligned_cols=35  Identities=26%  Similarity=0.246  Sum_probs=28.9

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHH
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVI   58 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL   58 (227)
                      .+.+|+|=..     ..+|.|||.|.+..+.|+..|+...
T Consensus        64 ~~~~F~I~t~-----~rt~~~~A~s~~e~~~Wi~ai~~~~   98 (100)
T cd01233          64 GPNTFAVCTK-----HRGYLFQALSDKEMIDWLYALNPLY   98 (100)
T ss_pred             CCcEEEEECC-----CCEEEEEcCCHHHHHHHHHHhhhhh
Confidence            4789999433     3469999999999999999998754

Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.

>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain

Probab=94.97  E-value=0.018  Score=45.09  Aligned_cols=28  Identities=21%  Similarity=0.516  Sum_probs=24.4

Q ss_pred             CCC-CccccccchHHHHHHHHHHHHHHHh
Q psy12865        143 APP-KSPASASSLEAKQLWVKRLREVIQE  170 (227)
Q Consensus       143 ~p~-k~vlKass~e~Kq~WVk~iREViQE  170 (227)
                      .|. ..+|+|+|.|.|+.|+++|+++|-|
T Consensus        69 ~p~~~~~l~A~s~e~K~~W~~~i~~~i~~   97 (97)
T cd01222          69 DPKGALQLTARNREEKRIWTQQLKRAMLQ   97 (97)
T ss_pred             CCceEEEEEecCHHHHHHHHHHHHHHhhC
Confidence            554 6889999999999999999999854

Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd00821 PH Pleckstrin homology (PH) domain

Probab=94.95  E-value=0.066  Score=36.90  Aligned_cols=49  Identities=24%  Similarity=0.330  Sum_probs=37.1

Q ss_pred             ccccccccceeeccC--CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHH
Q psy12865          4 RLMTSELGVTEHIEG--DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLRE   56 (227)
Q Consensus         4 slk~s~lGltE~Veg--D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Ire   56 (227)
                      .+.+.+..+....++  .+..|.|.....    ..|.|+|.|.+.++.|+..|+.
T Consensus        45 ~i~l~~~~v~~~~~~~~~~~~f~i~~~~~----~~~~~~~~s~~~~~~W~~~l~~   95 (96)
T cd00821          45 SIPLSGAEVEESPDDSGRKNCFEIRTPDG----RSYLLQAESEEEREEWIEALQS   95 (96)
T ss_pred             eEEcCCCEEEECCCcCCCCcEEEEecCCC----cEEEEEeCCHHHHHHHHHHHhc
Confidence            344555555555554  488999997653    3599999999999999999975

Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01238 PH_Tec Tec pleckstrin homology (PH) domain

Probab=94.57  E-value=0.073  Score=41.43  Aligned_cols=34  Identities=24%  Similarity=0.394  Sum_probs=27.6

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHH
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREV   57 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Irei   57 (227)
                      +.+.|.|=+..     .+|.|+|.|.+..+.||+.|++|
T Consensus        73 ~~~~F~i~t~~-----r~~yl~A~s~~er~~WI~ai~~~  106 (106)
T cd01238          73 FKYPFQVVHDE-----GTLYVFAPTEELRKRWIKALKQV  106 (106)
T ss_pred             cCccEEEEeCC-----CeEEEEcCCHHHHHHHHHHHHhC
Confidence            45778887643     25889999999999999999874

Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis

>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain

Probab=94.48  E-value=0.092  Score=37.87  Aligned_cols=36  Identities=33%  Similarity=0.477  Sum_probs=29.6

Q ss_pred             cCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHH
Q psy12865         17 EGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLRE   56 (227)
Q Consensus        17 egD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Ire   56 (227)
                      ..++..|.|.....    ..|.|+|.|.+.++.|+..|+.
T Consensus        55 ~~~~~~F~i~~~~~----~~~~~~a~s~~e~~~Wi~al~~   90 (91)
T cd01246          55 DSDDKCFTIDTGGD----KTLHLRANSEEERQRWVDALEL   90 (91)
T ss_pred             CCCCcEEEEEcCCC----CEEEEECCCHHHHHHHHHHHHh
Confidence            45578999996442    3599999999999999999874

Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain

Probab=94.16  E-value=0.1  Score=40.78  Aligned_cols=50  Identities=10%  Similarity=0.122  Sum_probs=38.8

Q ss_pred             CccccccccceeeccCCce----eEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHH
Q psy12865          3 GRLMTSELGVTEHIEGDEC----KFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREV   57 (227)
Q Consensus         3 ~slk~s~lGltE~VegD~~----kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Irei   57 (227)
                      .+|.++.+-..|.|+.+++    .|.|=...     .+|.|||.|.+..+.|+..|+++
T Consensus        45 g~I~L~~i~~ve~v~~~~~~~~~~fqivt~~-----r~~yi~a~s~~E~~~Wi~al~k~   98 (98)
T cd01244          45 ALIKLAAIKGTEPLSDKSFVNVDIITIVCED-----DTMQLQFEAPVEATDWLNALEKQ   98 (98)
T ss_pred             eeEEccceEEEEEcCCcccCCCceEEEEeCC-----CeEEEECCCHHHHHHHHHHHhcC
Confidence            4566778888888876655    57775432     36999999999999999999864

RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain

Probab=93.58  E-value=0.18  Score=39.07  Aligned_cols=34  Identities=12%  Similarity=0.363  Sum_probs=29.0

Q ss_pred             eEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         22 KFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        22 kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      .|+|=+..     .+|.|+|.|.+.++.|+..|+.+|..
T Consensus        69 ~F~i~t~~-----Rty~l~a~s~~e~~~Wi~ai~~v~~~  102 (103)
T cd01251          69 GVTLVTPE-----RKFLFACETEQDRREWIAAFQNVLSR  102 (103)
T ss_pred             eEEEEeCC-----eEEEEECCCHHHHHHHHHHHHHHhcC
Confidence            78887543     36999999999999999999999753

Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici

>cd01264 PH_melted Melted pleckstrin homology (PH) domain

Probab=93.25  E-value=0.2  Score=39.59  Aligned_cols=33  Identities=21%  Similarity=0.385  Sum_probs=27.5

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHH
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREV   57 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Irei   57 (227)
                      +..|+|=+..+     +|.|||.|.+.+++|++.|...
T Consensus        68 ~~~Fei~tp~r-----t~~l~A~se~e~e~WI~~i~~a  100 (101)
T cd01264          68 PKAFEIFTADK-----TYILKAKDEKNAEEWLQCLNIA  100 (101)
T ss_pred             CcEEEEEcCCc-----eEEEEeCCHHHHHHHHHHHHhh
Confidence            46899976553     5999999999999999998753

Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=93.23  E-value=0.045  Score=36.53  Aligned_cols=27  Identities=4%  Similarity=-0.408  Sum_probs=23.1

Q ss_pred             chhccccc--ceEEEEecceEEEecCCCC
Q psy12865        116 LEAKQLWV--KRLREVIQETYFSSALPLA  142 (227)
Q Consensus       116 v~~d~~a~--~elsv~~gqtve~le~~~~  142 (227)
                      |+.||.+.  +||++.+|+.++|++...+
T Consensus         2 Alydf~~~~~~eLs~~~Gd~i~v~~~~~~   30 (48)
T PF00018_consen    2 ALYDFDAEDPDELSFKKGDIIEVLEKSDD   30 (48)
T ss_dssp             ESSCBETSSTTBSEB-TTEEEEEEEESSS
T ss_pred             CCeeeCCCCCCEEeEECCCEEEEEEecCC
Confidence            68899998  9999999999999997554

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....

>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A

Probab=92.62  E-value=0.074  Score=36.18  Aligned_cols=25  Identities=4%  Similarity=-0.320  Sum_probs=20.5

Q ss_pred             chhccccc--ceEEEEecceEEEecCC
Q psy12865        116 LEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       116 v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      |+.||.+.  +||++++||.|.|++..
T Consensus         1 Al~~y~~~~~dELs~~~Gd~i~v~~~~   27 (49)
T PF14604_consen    1 ALYDYEAQDPDELSFKKGDVITVLEKS   27 (49)
T ss_dssp             ESSCBCSSSTTB-EB-TTEEEEEEEES
T ss_pred             CCccCCCCCcCEeeEcCCCEEEEEEeC
Confidence            57899998  99999999999999763

...

>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain

Probab=92.46  E-value=0.34  Score=38.33  Aligned_cols=29  Identities=21%  Similarity=0.366  Sum_probs=25.0

Q ss_pred             ceEEEEcCCHHHHHHHHHHHHHHHHhhcc
Q psy12865         35 CRILLKASSLEAKQLWVKRLREVIQETYF   63 (227)
Q Consensus        35 ~~~iLQAss~evK~~Wvk~IreiL~~q~l   63 (227)
                      ..|.|+|.|.+..+.|+..|+.++...-.
T Consensus        90 ~~~~~~A~s~~e~~~Wi~al~~~~~~~~~  118 (125)
T cd01252          90 SVYRISAANDEEMDEWIKSIKASISPNPF  118 (125)
T ss_pred             eEEEEECCCHHHHHHHHHHHHHHHhcCch
Confidence            46889999999999999999999875533

Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain

Probab=92.20  E-value=0.33  Score=37.62  Aligned_cols=30  Identities=27%  Similarity=0.333  Sum_probs=24.7

Q ss_pred             EEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHH
Q psy12865         23 FAVWTGRAPISDCRILLKASSLEAKQLWVKRLREV   57 (227)
Q Consensus        23 FeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Irei   57 (227)
                      |.|=..     ..+|.|.|.|.+..+.||+.|++|
T Consensus        78 f~i~t~-----~r~y~l~A~s~ee~~~Wi~~I~~~  107 (108)
T cd01266          78 FDIETI-----VRDLYLVAKNEEEMTLWVNCICKL  107 (108)
T ss_pred             EEEEeC-----CccEEEEECCHHHHHHHHHHHHhh
Confidence            666532     235999999999999999999987

Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str

>cd00900 PH-like Pleckstrin homology-like domain

Probab=92.12  E-value=0.41  Score=33.16  Aligned_cols=36  Identities=31%  Similarity=0.399  Sum_probs=29.8

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHH
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLRE   56 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Ire   56 (227)
                      .+..|+|..+..  ....|+|+|.|.+..+.|+..|++
T Consensus        63 ~~~~F~i~~~~~--~~~~~~~~~~~~~~~~~W~~al~~   98 (99)
T cd00900          63 DPNCFAIVTKDR--GRRVFVFQADSEEEAQEWVEALQQ   98 (99)
T ss_pred             CCceEEEECCCC--CcEEEEEEcCCHHHHHHHHHHHhc
Confidence            568999997652  234699999999999999999875

Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.

>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain

Probab=91.95  E-value=0.39  Score=35.75  Aligned_cols=34  Identities=18%  Similarity=0.335  Sum_probs=26.8

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHH
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVI   58 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL   58 (227)
                      .+.|+|=...     ..|.|+|.|.+..+.|+..|+.++
T Consensus        68 ~~~f~i~t~~-----r~~~~~a~s~~e~~~Wi~ai~~~i  101 (101)
T cd01235          68 KGFFDLKTSK-----RTYNFLAENINEAQRWKEKIQQCI  101 (101)
T ss_pred             ceEEEEEeCC-----ceEEEECCCHHHHHHHHHHHHhhC
Confidence            3457774432     359999999999999999999864

Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .

>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain

Probab=91.57  E-value=0.44  Score=34.47  Aligned_cols=33  Identities=21%  Similarity=0.323  Sum_probs=27.3

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHH
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLRE   56 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Ire   56 (227)
                      .+..|.|....     ..|+|+|.|.+..+.|+..|+.
T Consensus        61 ~~~~f~i~~~~-----~~~~f~a~s~~~~~~Wi~al~~   93 (94)
T cd01250          61 RRFCFEVISPT-----KTWHFQADSEEERDDWISAIQE   93 (94)
T ss_pred             CceEEEEEcCC-----cEEEEECCCHHHHHHHHHHHhc
Confidence            46789998543     3599999999999999999863

Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain

Probab=90.74  E-value=0.53  Score=35.66  Aligned_cols=33  Identities=21%  Similarity=0.397  Sum_probs=26.3

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHH
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLR   55 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Ir   55 (227)
                      .+..|.|.....    ..|.|||.|.+.-+.|+..|+
T Consensus        70 ~~~~F~l~~~~~----~~~~f~a~s~e~~~~Wi~aL~  102 (104)
T cd01253          70 KKHVFRLRLPDG----AEFLFQAPDEEEMSSWVRALK  102 (104)
T ss_pred             CceEEEEEecCC----CEEEEECCCHHHHHHHHHHHh
Confidence            456788875332    359999999999999999986

Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=89.78  E-value=0.21  Score=34.15  Aligned_cols=23  Identities=4%  Similarity=-0.291  Sum_probs=19.3

Q ss_pred             cchhccccc--ceEEEEecceEEEe
Q psy12865        115 SLEAKQLWV--KRLREVIQETYFSS  137 (227)
Q Consensus       115 ~v~~d~~a~--~elsv~~gqtve~l  137 (227)
                      .|+.||.+.  ++|++.+||.|+|+
T Consensus         3 ~a~~d~~~~~~~~Ls~~~Gd~i~v~   27 (55)
T PF07653_consen    3 RAIFDYVAEDPDELSFKKGDVIEVL   27 (55)
T ss_dssp             EESSSBESSSTTB-EB-TTEEEEEE
T ss_pred             EEeEEECCCCCCceEEecCCEEEEE
Confidence            478999997  89999999999999

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....

>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A

Probab=89.54  E-value=0.61  Score=38.34  Aligned_cols=44  Identities=18%  Similarity=0.249  Sum_probs=27.5

Q ss_pred             eeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHH
Q psy12865         13 TEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLRE   56 (227)
Q Consensus        13 tE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Ire   56 (227)
                      ....+.+.-.|.|-+..-......|+|.|+|...++.|+..|.+
T Consensus        90 ~~~~~~~~~~yp~~~~hlG~~~~~~TLyA~s~~~R~~W~e~I~~  133 (135)
T PF15405_consen   90 NPNSSDSKSLYPFTFRHLGRKGYSYTLYASSAQARQKWLEKIEE  133 (135)
T ss_dssp             ------TSSEEEEEE---GGG-EEEEEE-SSHHHHHHHHHHHHH
T ss_pred             eeeeccCCCccCEEEEEcCCCceEEEEEeCCHHHHHHHHHHHHh
Confidence            34456678888888644333334589999999999999999976

>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain

Probab=89.05  E-value=0.76  Score=36.05  Aligned_cols=35  Identities=23%  Similarity=0.361  Sum_probs=28.2

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHH
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLRE   56 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Ire   56 (227)
                      +-|.+|+|-+...+   .+|-+-|++ +.++.|++.|+.
T Consensus        63 ~r~~cFel~~~~~~---~~y~~~a~~-~er~~Wi~~l~~   97 (98)
T cd01245          63 GRPNCFQIVERALP---TVYYSCRSS-EERDKWIESLQA   97 (98)
T ss_pred             CCCeEEEEecCCCC---eEEEEeCCH-HHHHHHHHHHhc
Confidence            55789999765432   369999999 999999999974

RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain

Probab=88.08  E-value=1.3  Score=32.97  Aligned_cols=34  Identities=21%  Similarity=0.303  Sum_probs=27.1

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHH
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLRE   56 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Ire   56 (227)
                      .+..|.|.....    ..|.|+|.|.+..+.|+..|+.
T Consensus        62 k~~~F~I~~~~~----~~~~f~a~s~~e~~~Wi~ai~~   95 (96)
T cd01260          62 KKYAFKVCHPVY----KSFYFAAETLDDLSQWVNHLIT   95 (96)
T ss_pred             CceEEEECCCCC----cEEEEEeCCHHHHHHHHHHHHh
Confidence            456788874431    3599999999999999999974

Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet

>smart00326 SH3 Src homology 3 domains

Probab=86.86  E-value=0.33  Score=31.44  Aligned_cols=26  Identities=4%  Similarity=-0.299  Sum_probs=23.6

Q ss_pred             cchhccccc--ceEEEEecceEEEecCC
Q psy12865        115 SLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       115 ~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      .++.||.+.  +||++++|+.|+|++..
T Consensus         6 ~a~~~~~~~~~~~l~~~~Gd~v~v~~~~   33 (58)
T smart00326        6 RALYDYTAQDPDELSFKKGDIITVLEKS   33 (58)
T ss_pred             EEeeeeCCCCCCCCCCCCCCEEEEEEcC
Confidence            478899998  89999999999999985

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.

>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain

Probab=86.57  E-value=1.4  Score=35.56  Aligned_cols=53  Identities=21%  Similarity=0.340  Sum_probs=38.8

Q ss_pred             CCCccccccccceeeccCC--------ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHH
Q psy12865          1 MKGRLMTSELGVTEHIEGD--------ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLRE   56 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD--------~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Ire   56 (227)
                      ||..|.|..+-|+..-.|+        ...|.|-....   ..-|++.|.|+|.|+.|+..+.+
T Consensus        45 yKgri~l~~~~I~d~~Dg~~~~~~~~~knafkl~~~~~---~~~~~f~~Kt~e~K~~Wm~a~~~  105 (109)
T cd01224          45 YKGRIDLDRCEVVNIRDGKMFSSGHTIKNSLKIYSEST---DEWYLFSFKSAERKHRWLSAFAL  105 (109)
T ss_pred             EEEEEEcccEEEEECCCCccccCCceeEEEEEEEEcCC---CeEEEEEECCHHHHHHHHHHHHH
Confidence            6777888888887765553        23466665442   23599999999999999998763

Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies

Probab=86.31  E-value=0.35  Score=31.07  Aligned_cols=25  Identities=4%  Similarity=-0.374  Sum_probs=22.6

Q ss_pred             chhccccc--ceEEEEecceEEEecCC
Q psy12865        116 LEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       116 v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ++.||.+.  ++|++.+|+.|.|++..
T Consensus         4 a~~~~~~~~~~~l~~~~Gd~v~v~~~~   30 (54)
T cd00174           4 ALYDYDARDPDELSFKKGDIIEVLEKS   30 (54)
T ss_pred             EEEeeCCCCCCCCCCCCCCEEEEEEcC
Confidence            67899998  89999999999999984

>PF15409 PH_8: Pleckstrin homology domain

Probab=85.99  E-value=1.6  Score=34.00  Aligned_cols=38  Identities=26%  Similarity=0.282  Sum_probs=30.9

Q ss_pred             eccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHH
Q psy12865         15 HIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREV   57 (227)
Q Consensus        15 ~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Irei   57 (227)
                      ++..+.|+|.|=+|-     +.|.|+|.|.+.-+.||..|+++
T Consensus        51 s~~~~~~~I~idsg~-----~i~hLKa~s~~~f~~Wv~aL~~a   88 (89)
T PF15409_consen   51 SANKKSRRIDIDSGD-----EIWHLKAKSQEDFQRWVSALQKA   88 (89)
T ss_pred             EecCCCCEEEEEcCC-----eEEEEEcCCHHHHHHHHHHHHhc
Confidence            345578999996553     46999999999999999998763

>KOG3518|consensus

Probab=84.31  E-value=0.9  Score=43.86  Aligned_cols=60  Identities=25%  Similarity=0.418  Sum_probs=48.3

Q ss_pred             CCCccccccccceeec-cCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhhc
Q psy12865          1 MKGRLMTSELGVTEHI-EGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQETY   62 (227)
Q Consensus         1 yK~slk~s~lGltE~V-egD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q~   62 (227)
                      ||-.|+-+.+=+.|-+ -..|..|.+.+=.-|.  --|+++|.|.+.|..|+.++.+++.+-+
T Consensus       376 ~k~~ilc~nlmlne~icpeeplsfqv~~fdnpk--aq~~fma~sme~kr~wm~elkrlildh~  436 (521)
T KOG3518|consen  376 CKAHILCGNLMLNEVICPEEPLSFQVFHFDNPK--AQHTFMAKSMEDKRLWMLELKRLILDHH  436 (521)
T ss_pred             eehhhhccchhhheeccCCCCceeEEEecCCcc--hhhhhhhhhhHHHHHHHHHHHHHHHhhh
Confidence            5667777788888887 7899999998333333  2499999999999999999999987763

>cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain

Probab=81.81  E-value=3.1  Score=35.62  Aligned_cols=61  Identities=13%  Similarity=0.245  Sum_probs=42.7

Q ss_pred             CCCccccccccceeeccC---CceeEEEecCCCC---CCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865          1 MKGRLMTSELGVTEHIEG---DECKFAVWTGRAP---ISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus         1 yK~slk~s~lGltE~Veg---D~~kFeiW~~r~~---~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      |+..|-++++.+.+.--.   ..|-|||-+-+..   ..+..|.|-.+++|.|+..+|-||.||-+-
T Consensus        91 fr~miP~~alQVR~~n~ad~e~~~vwEliH~kSe~egRpE~vfqLCcS~~E~k~~flK~Irsilre~  157 (160)
T cd01255          91 FRVLIPVTALQVRASSAADMESNFLWELIHLKSELEGRPEKVFVLCCSTAESRNAFLKTIRSILRES  157 (160)
T ss_pred             EEEeeceeeeeeecCCCcCcccceEEEEEeecccccCCCcceEEEecCCHHHHHHHHHHHHHHHHHH
Confidence            455666777777665433   3456676632211   144579999999999999999999999764

TIAM Pleckstrin homology (PH) domain. TIAM (T-cell invasion and metastasis) is a guanine nucleotide exchange factor specific for RAC1. It consists of an N-terminal PH domain followed by Raf-like ras binding domain(RDB), a PDZ domain, a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. This subfamily contains the alignment of the PH domain that follows the DH domain.

>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain

Probab=81.69  E-value=2.3  Score=34.04  Aligned_cols=30  Identities=27%  Similarity=0.443  Sum_probs=24.0

Q ss_pred             eEEEecCCCCCCCceEEEEcCCHHHHHHHHHHH
Q psy12865         22 KFAVWTGRAPISDCRILLKASSLEAKQLWVKRL   54 (227)
Q Consensus        22 kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~I   54 (227)
                      +|+|-+..++.   .++|||-|....++|+..|
T Consensus        72 CFei~~~~~~~---~~~lQA~Se~~~~~Wi~A~  101 (104)
T cd01249          72 CFDVEVEEKPG---VITMQALSEKDRRLWIEAM  101 (104)
T ss_pred             eEeeeecCCCC---eEEEEecCHHHHHHHHHhh
Confidence            56787655543   5999999999999999865

Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain

Probab=81.44  E-value=3.3  Score=33.33  Aligned_cols=35  Identities=29%  Similarity=0.426  Sum_probs=26.4

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHH
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVI   58 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL   58 (227)
                      +..|-|.....    .-|.|||.+.+.-+.||..|.-+-
T Consensus        77 ~~VF~L~~~~g----~~~lfqA~~~ee~~~Wi~~I~~~~  111 (117)
T cd01230          77 PHVFRLRTADW----REFLFQTSSLKELQSWIERINVVA  111 (117)
T ss_pred             CcEEEEEcCCC----CEEEEECCCHHHHHHHHHHHHHHH
Confidence            34466665332    249999999999999999998763

EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	227
2nz8_B	313	N-Terminal Dhph Cassette Of Trio In Complex With Nu		2e-19
1nty_A	311	Crystal Structure Of The First DhPH DOMAIN OF TRIO		2e-19

>pdb|2NZ8|B Chain B, N-Terminal Dhph Cassette Of Trio In Complex With Nucleotide- Free Rac1 Length = 313

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 41/59 (69%), Positives = 49/59 (83%)
Query: 2   KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE 60
           K +L TSELGVTEH+EGD CKFA+W GR P SD +I+LKASS+E KQ W+K +REVIQE
Sbjct: 253 KSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQE 311

>pdb|1NTY|A Chain A, Crystal Structure Of The First DhPH DOMAIN OF TRIO TO 1.7 A Length = 311

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 41/59 (69%), Positives = 49/59 (83%)
Query: 2   KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE 60
           K +L TSELGVTEH+EGD CKFA+W GR P SD +I+LKASS+E KQ W+K +REVIQE
Sbjct: 251 KSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQE 309

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	227
1nty_A	311	Triple functional domain protein; DBL, pleckstrin,	2e-16
2rgn_B	354	RHOA/RAC/CDC42 exchange factor; heterotrimeric G-p	4e-14
1kz7_A	353	Guanine nucleotide exchange factor DBS; guanine nu	1e-11
1fho_A	119	UNC-89; pleckstrin homology domain, electrostatics	4e-10
1foe_A	377	T-lymphoma invasion and metastasis inducing protei	3e-07
2dfk_A	402	Collybistin II; DH domain, PH domain, cell cycle;	3e-07
1dbh_A	354	Protein (human SOS 1); guanine nucleotide exchange	9e-07
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	3e-05
3ky9_A	587	Proto-oncogene VAV; calponin homology domain, DBL	7e-05
2vrw_B	406	P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP	1e-04

>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A Length = 311

 Score = 75.6 bits (186), Expect = 2e-16
 Identities = 41/59 (69%), Positives = 49/59 (83%)

Query: 2   KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE 60
           K +L TSELGVTEH+EGD CKFA+W GR P SD +I+LKASS+E KQ W+K +REVIQE
Sbjct: 251 KSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQE 309

>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens} Length = 354

 Score = 69.1 bits (169), Expect = 4e-14
 Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 2/83 (2%)

Query: 2   KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET 61
           K  +  S LG+  +++GD C+FA+ +        R +L+A+     Q W+K + ++++  
Sbjct: 261 KNSIKVSCLGLEGNLQGDPCRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILES- 319

Query: 62  YFSSALPLAAPPKSPAKLKSRSN 84
                L     P    + +S++N
Sbjct: 320 -QRDFLNALQSPIEYQRRESQTN 341

>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A Length = 353

 Score = 62.3 bits (151), Expect = 1e-11
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 2   KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE 60
           K  L  + +G+TE+++GD  KF +W       +   +++A + E K  WV  +R+V+  
Sbjct: 271 KQSLNMTAVGITENVKGDTKKFEIWYNA---REEVYIIQAPTPEIKAAWVNAIRKVLTS 326

>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1 Length = 119

 Score = 54.9 bits (132), Expect = 4e-10
 Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 4/65 (6%)

Query: 2   KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKA--SSLEAKQLWVKRLREVIQ 59
              +   +  + +H   DE    +      +   RI  K   +S   ++ W++ + E  Q
Sbjct: 54  YSSIRLDKYNIRQH-TTDEDTIVLQPQEPGLPSFRIKPKDFETSEYVRKAWLRDIAE-EQ 111

Query: 60  ETYFS 64
           E Y +
Sbjct: 112 EKYAA 116

>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 Length = 377

 Score = 49.2 bits (117), Expect = 3e-07
 Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 6/73 (8%)

Query: 2   KGRLMTSELGVTEHIEGDECKFAVW------TGRAPISDCRILLKASSLEAKQLWVKRLR 55
           +  + T  L V      D    AV       +      +    L  SS E+++ ++K + 
Sbjct: 303 RHMIPTEALQVRALPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVH 362

Query: 56  EVIQETYFSSALP 68
            ++++ +    L 
Sbjct: 363 SILRDKHRRQLLK 375

>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1 Length = 402

 Score = 49.1 bits (117), Expect = 3e-07
 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 5/64 (7%)

Query: 2   KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCR-----ILLKASSLEAKQLWVKRLRE 56
           KGR+   +  V +  +G +  F V    A     +      L  A  LE K  W++  RE
Sbjct: 301 KGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNKETEEVHLFFAKKLEEKIRWLRAFRE 360

Query: 57  VIQE 60
             + 
Sbjct: 361 ERKM 364

>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A Length = 354

 Score = 47.6 bits (113), Expect = 9e-07
 Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 1   MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE 60
           +K +    ++ + +  + +E K A         +  ++  A S E K  W+  L  +   
Sbjct: 293 LKEKFFMRKVQINDKDDTNEYKHAFEI--ILKDENSVIFSAKSAEEKNNWMAALISLQYR 350

Query: 61  TYF 63
           +  
Sbjct: 351 STL 353

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D Length = 466

 Score = 43.0 bits (101), Expect = 3e-05
 Identities = 16/71 (22%), Positives = 23/71 (32%), Gaps = 5/71 (7%)

Query: 1   MKGRLMTSELGVTEHIEGDECKFAVWTGRA-----PISDCRILLKASSLEAKQLWVKRLR 55
            KGRL    L V +  +G +    V    A       +    LL     E KQ W+K   
Sbjct: 377 YKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHRGATGDSHLLCTRKPEQKQRWLKAFA 436

Query: 56  EVIQETYFSSA 66
              ++      
Sbjct: 437 REREQVQLDQE 447

>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A Length = 587

 Score = 42.3 bits (99), Expect = 7e-05
 Identities = 12/64 (18%), Positives = 19/64 (29%), Gaps = 3/64 (4%)

Query: 2   KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCR---ILLKASSLEAKQLWVKRLREVI 58
           K  +      V +   GD            I D       L   + E K+ W+++    I
Sbjct: 447 KDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAI 506

Query: 59  QETY 62
              Y
Sbjct: 507 SNIY 510

>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A Length = 406

 Score = 41.4 bits (97), Expect = 1e-04
 Identities = 10/67 (14%), Positives = 20/67 (29%), Gaps = 9/67 (13%)

Query: 2   KGRLMTSELGVTEHIEGD------ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLR 55
           K  +      V +   G+         F +   +         L   + E K+ W+++  
Sbjct: 275 KASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQ---GAQGYELFFKTRELKKKWMEQFE 331

Query: 56  EVIQETY 62
             I   Y
Sbjct: 332 MAISNIY 338

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	227
1fho_A	119	UNC-89; pleckstrin homology domain, electrostatics	99.59
2rgn_B	354	RHOA/RAC/CDC42 exchange factor; heterotrimeric G-p	99.06
1nty_A	311	Triple functional domain protein; DBL, pleckstrin,	98.83
1kz7_A	353	Guanine nucleotide exchange factor DBS; guanine nu	98.6
3t06_A	418	PDZ-rhogef, RHO guanine nucleotide exchange factor	98.54
1xcg_A	368	PDZ-rhogef, RHO guanine nucleotide exchange factor	98.25
1u3o_A	82	Huntingtin-associated protein-interacting protein;	98.16
1foe_A	377	T-lymphoma invasion and metastasis inducing protei	98.12
3p6a_A	377	RHO guanine nucleotide exchange factor 1; regulati	97.86
1dbh_A	354	Protein (human SOS 1); guanine nucleotide exchange	97.72
3odw_A	536	RHO guanine nucleotide exchange factor 1; regulati	97.65
1txd_A	385	RHO guanine nucleotide exchange factor 12; helical	97.54
3jzy_A	510	Intersectin 2; C2 domain, structural genomics cons	97.5
2dfk_A	402	Collybistin II; DH domain, PH domain, cell cycle;	97.31
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	97.28
3mpx_A	434	FYVE, rhogef and PH domain-containing protein 5; s	97.04
3ksy_A	1049	SOS-1, SON of sevenless homolog 1; RAS, RAS activa	97.02
2vrw_B	406	P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP	97.01
3ky9_A	587	Proto-oncogene VAV; calponin homology domain, DBL	96.82
2rlo_A	128	Centaurin-gamma 1; split PH domain, alternative sp	95.98
3tfm_A	228	Myosin X; split PH domain, motor protein; 2.53A {R	95.91
2d9x_A	120	Oxysterol binding protein-related protein 11; PH d	95.84
4a6h_A	120	Phosphatidylinositol 4,5-bisphosphate-binding Pro	95.83
1u5d_A	108	SKAP55, SRC kinase-associated phosphoprotein of 55	95.58
2i5f_A	109	Pleckstrin; PH domain, protein-inositol phosphate	95.55
2dhk_A	119	TBC1 domain family member 2; PH domain, paris-1, s	95.51
1fho_A	119	UNC-89; pleckstrin homology domain, electrostatics	95.49
1x1g_A	129	Pleckstrin 2; PH domain, structural genomics, rike	95.4
3rcp_A	103	Pleckstrin homology domain-containing family A ME;	95.29
1x05_A	129	Pleckstrin; PH domain, structural genomics, NPPSFA	95.21
2cod_A	115	Centaurin-delta 1; ARF GAP and RHO GAP with ankyri	95.14
2dn6_A	115	KIAA0640 protein; PH domain, structural genomics,	95.03
1pls_A	113	Pleckstrin homology domain; phosphorylation; NMR {	94.97
2lul_A	164	Tyrosine-protein kinase TEC; structural genomics,	94.87
1v61_A	132	RAC/CDC42 guanine nucleotide exchange factor (GEF)	94.78
1wg7_A	150	Dedicator of cytokinesis protein 9; pleckstrin hom	94.71
1wjm_A	123	Beta-spectrin III; PH domain, signal transduction,	94.64
1eaz_A	125	Tandem PH domain containing protein-1; lipid-bindi	94.59
1btk_A	169	Bruton'S tyrosine kinase; transferase, PH domain,	94.58
2p0d_A	129	RHO GTPase-activating protein 9; protein-phosphoin	94.2
2w2x_D	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	94.17
3pp2_A	124	RHO GTPase-activating protein 27; PH domain, GTPas	94.16
3cxb_B	112	Pleckstrin homology domain-containing family M mem	94.16
1x1f_A	149	Signal-transducing adaptor protein 1; docking prot	94.05
1fgy_A	127	GRP1; PH domain, signaling protein; HET: 4IP; 1.50	94.01
2yry_A	122	Pleckstrin homology domain-containing family A mem	93.97
1fao_A	126	Dual adaptor of phosphotyrosine and 3- phosphoinos	93.96
2rsg_A	94	Collagen type IV alpha-3-binding protein; pleckstr	93.91
1dro_A	122	Beta-spectrin; cytoskeleton; NMR {Drosophila melan	93.84
1v89_A	118	Hypothetical protein KIAA0053; pleckstrin homology	93.66
1v88_A	130	Oxysterol binding protein-related protein 8; vesic	93.61
1wgq_A	109	FYVE, rhogef and PH domain containing 6; ethanol d	93.58
1btn_A	106	Beta-spectrin; signal transduction protein; HET: I	93.43
2dkp_A	128	Pleckstrin homology domain-containing family A mem	93.24
1v5u_A	117	SBF1, SET binding factor 1; MTMR5, the pleckstrin	93.13
1upq_A	123	PEPP1; PH domain, phosphoinositide binding, signal	93.08
2d9y_A	117	Pleckstrin homology domain-containing protein fami	93.06
2d9v_A	130	Pleckstrin homology domain-containing protein fami	93.05
1u5f_A	148	SRC-associated adaptor protein; PH domain of SKAP-	92.93
2da0_A	114	130-kDa phosphatidylinositol 4,5-biphosphate- depe	92.85
1v1c_A	71	Obscurin; muscle, sarcomere, adapter, myogenesis,	92.72
3aj4_A	112	Pleckstrin homology domain-containing family B ME;	92.7
2cof_A	107	Protein KIAA1914; PH domain, structural genomics,	92.17
1uhc_A	79	KIAA1010 protein; beta barrel, SH3, human cDNA, st	92.09
1unq_A	125	RAC-alpha serine/threonine kinase; transferase, pl	91.89
2lx7_A	60	GAS-7, growth arrest-specific protein 7; structura	91.57
2fjl_A	150	1-phosphatidylinositol-4,5-bisphosphate phosphodie	91.23
3qwm_A	140	Iqsec1, IQ motif and SEC7 domain-containing protei	90.93
2rov_A	117	RHO-associated protein kinase 2; ATP-binding, coil	90.91
2y7b_A	134	Actin-binding protein anillin; cell cycle; 1.90A {	90.66
1zc3_B	113	Exocyst complex protein EXO84; exocytosis, small G	90.15
2lj0_A	65	Sorbin and SH3 domain-containing protein 1; R85FL,	89.94
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	89.9
2lg1_A	185	A-kinase anchor protein 13; metal binding protein;	89.62
2j59_M	168	RHO-GTPase activating protein 10; ARF, ARF1, ARFBD	89.45
1v5p_A	126	Pleckstrin homology domain-containing, family A; T	89.4
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	89.27
2dtc_A	126	RAL guanine nucleotide exchange factor ralgps1A; P	89.1
1wxb_A	68	Epidermal growth factor receptor pathway substrate	88.81
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	88.74
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	88.71
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	88.66
1nty_A	311	Triple functional domain protein; DBL, pleckstrin,	88.64
2q13_A	385	DCC-interacting protein 13 alpha; APPL1, BAR domai	88.48
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	88.41
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	88.25
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	88.19
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	88.13
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	88.12
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	88.07
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	87.93
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	87.85
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	87.84
1i07_A	60	Epidermal growth factor receptor kinase substrate	87.81
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	87.76
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	87.73
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	87.72
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	87.68
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	87.65
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	87.65
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	87.54
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	87.46
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	87.4
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	87.33
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	87.32
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	87.29
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	87.26
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	87.15
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	87.12
3a8p_A	263	T-lymphoma invasion and metastasis-inducing protei	87.1
2jte_A	64	CD2-associated protein; SH3 domain, coiled coil, c	87.09
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	87.01
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	86.91
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	86.9
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	86.88
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	86.83
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	86.83
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	86.63
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	86.63
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	86.61
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	86.6
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	86.59
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	86.56
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	86.52
2da9_A	70	SH3-domain kinase binding protein 1; structural ge	86.51
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	86.48
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	86.43
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	86.34
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	86.32
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	86.28
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	86.08
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	86.07
2fpe_A	62	C-JUN-amino-terminal kinase interacting protein 1;	86.03
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	86.02
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	85.96
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	85.91
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	85.91
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	85.7
4e6r_A	58	Cytoplasmic protein NCK2; SH3 domain, protein bind	85.65
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	85.63
2ydl_A	69	SH3 domain-containing kinase-binding protein 1; si	85.6
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	85.53
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	85.5
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	85.48
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	85.4
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	85.39
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	85.38
1wi1_A	126	Calcium-dependent activator protein for secretion,	85.37
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	85.36
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	85.35
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	85.33
1wfw_A	74	Kalirin-9A; SH3 domain, neuron-specific GDP/GTP ex	85.3
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	85.27
2k9g_A	73	SH3 domain-containing kinase-binding protein 1; CI	85.24
2dl7_A	73	KIAA0769 protein; SH3 domain, FCHSD2, structural g	85.23
1ugv_A	72	KIAA0621, olygophrenin-1 like protein; beta barrel	85.1
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	85.07
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	84.89
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	84.83
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	84.72
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	84.71
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	84.67
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	84.66
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	84.6
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	84.6
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	84.59
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	84.57
2dm1_A	73	Protein VAV-2; RHO family guanine nucleotide excha	84.56
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	84.46
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens}	84.45
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	84.44
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	84.4
2fjl_A	150	1-phosphatidylinositol-4,5-bisphosphate phosphodie	84.4
1wxu_A	93	Peroxisomal biogenesis factor 13; SH3 domain, PEX1	84.29
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	84.26
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	84.22
1tg0_A	68	BBC1 protein, myosin tail region-interacting prote	84.02
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	83.83
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	83.82
2cre_A	71	HEF-like protein; SH3 domain, SRC homology 3 domai	83.81
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	83.81
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	83.81
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	83.79
3lju_X	386	ARF-GAP with dual PH domain-containing protein 1;	83.79
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	83.77
2m0y_A	74	Dedicator of cytokinesis protein 1; apoptosis; NMR	83.72
1x43_A	81	Endophilin B1, SH3 domain GRB2-like protein B1; st	83.71
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	83.57
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	83.52
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	83.5
2r09_A	347	Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-ph	83.48
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	83.08
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	83.06
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	82.94
4glm_A	72	Dynamin-binding protein; SH3 domain, DNMBP, struct	82.94
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	82.86
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	82.81
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	82.71
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	82.62
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	82.55
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	82.46
1awj_A	77	ITK; transferase, regulatory intramolecular comple	82.38
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	82.34
1v5m_A	136	SH2 and PH domain-containing adapter protein APS;	82.28
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	82.26
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	82.19
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	82.19
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	82.02
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	81.69
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	81.63
2coc_A	112	FYVE, rhogef and PH domain containing protein 3; s	81.47
3p6a_A	377	RHO guanine nucleotide exchange factor 1; regulati	81.46
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	81.39
1uff_A	93	Intersectin 2; beta barrel, SH3 domain, endocytosi	81.38
4h8s_A	407	DCC-interacting protein 13-beta; BAR domain, pleck	81.35
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	81.09
3u23_A	65	CD2-associated protein; structural genomics, struc	81.03
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	80.68
1qqg_A	264	IRS-1, insulin receptor substrate 1; beta-sandwhic	80.57
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	80.14
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	80.11

>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1

Probab=99.59  E-value=1.5e-16  Score=126.67  Aligned_cols=57  Identities=14%  Similarity=0.225  Sum_probs=51.7

Q ss_pred             CCCccccccccceeecc-CCceeEEEecCCCCCCCceEEE--EcCCHH-HHHHHHHHHHHHHHhh
Q psy12865          1 MKGRLMTSELGVTEHIE-GDECKFAVWTGRAPISDCRILL--KASSLE-AKQLWVKRLREVIQET   61 (227)
Q Consensus         1 yK~slk~s~lGltE~Ve-gD~~kFeiW~~r~~~s~~~~iL--QAss~e-vK~~Wvk~IreiL~~q   61 (227)
                      ||++|+|+++||||+++ ||+|+|+||+++++   +.|+|  ||+|+| +|++|+++|++ ++++
T Consensus        53 ~K~~ikl~~~~lte~~~~~d~~kFeiw~~~~~---~~~il~~qA~s~e~~K~~Wv~~I~~-~~~~  113 (119)
T 1fho_A           53 HYSSIRLDKYNIRQHTTDEDTIVLQPQEPGLP---SFRIKPKDFETSEYVRKAWLRDIAE-EQEK  113 (119)
T ss_dssp             SCCEEESSSCEEEEECTTCCEEEEECCSTTCC---CBCCCCCSSSSCSHHHHHHHHHHHT-CCHH
T ss_pred             EeeEEeeceeEEEecCCCCCCcEEEEccCCCC---ceEEEeeecCCcHHHHHHHHHHHHH-HHHH
Confidence            89999999999999999 99999999988854   37999  999999 99999999999 4443

>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}

Probab=99.06  E-value=1e-11  Score=111.70  Aligned_cols=86  Identities=24%  Similarity=0.448  Sum_probs=64.6

Q ss_pred             CCCccccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh-ccccCC--CCCCCCCCcc
Q psy12865          1 MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET-YFSSAL--PLAAPPKSPA   77 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q-~l~~al--p~~~~~ks~~   77 (227)
                      ||+.|++++++|+++++||++.|+||++........|+|+|+|++.|+.|++.|++++++| .|.+|+  |+. +++...
T Consensus       260 ~k~~i~l~~~~v~~~~~~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~~l~a~~~~~~-~~~~~~  338 (354)
T 2rgn_B          260 YKNSIKVSCLGLEGNLQGDPCRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILESQRDFLNALQSPIE-YQRRES  338 (354)
T ss_dssp             EEEEEEGGGEEEEESGGGCTTEEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHHTSHHH-HHHHHH
T ss_pred             EcceeeccceeeeeccCCCCceEEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHhcChhh-hccccc
Confidence            6788999999999999999999999975433345689999999999999999999999999 566665  666 544433


Q ss_pred             ccccCCCCCCC
Q psy12865         78 KLKSRSNQPNM   88 (227)
Q Consensus        78 ~~~~~s~r~~~   88 (227)
                      +..+.+ |+.|
T Consensus       339 ~~~~~g-~~~~  348 (354)
T 2rgn_B          339 QTNSLG-RPRG  348 (354)
T ss_dssp             HHHC-------
T ss_pred             cccccC-CCCC
Confidence            333334 4443

>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A

Probab=98.83  E-value=2.8e-09  Score=93.62  Aligned_cols=61  Identities=67%  Similarity=1.113  Sum_probs=55.4

Q ss_pred             CCCccccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865          1 MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ||+.|.+++++|+++++||+++|+||+++.+.++..|+|+|+|++.|+.|++.|++++.+.
T Consensus       250 ~k~~i~l~~~~v~e~~~~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e~  310 (311)
T 1nty_A          250 YKSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQER  310 (311)
T ss_dssp             EEEEEEGGGEEEECCCTTCTTEEEEEESSSCCTTTCEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred             EeeeeeccceeeEEccCCCCceEEEEeCCCCCCCceEEEECCCHHHHHHHHHHHHHHHhhh
Confidence            5778899999999999999999999997766667789999999999999999999998875

>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A

Probab=98.60  E-value=2.8e-08  Score=89.21  Aligned_cols=58  Identities=29%  Similarity=0.601  Sum_probs=52.5

Q ss_pred             CCCccccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865          1 MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ||..|.++.+++++.+.||+++|+||+...   ...|+|+|+|++.|+.|++.|+++++++
T Consensus       270 ~k~~i~l~~~~v~e~~~~~~~~F~i~~~~~---~~~~~l~a~s~~ek~~W~~~i~~ai~~~  327 (353)
T 1kz7_A          270 YKQSLNMTAVGITENVKGDTKKFEIWYNAR---EEVYIIQAPTPEIKAAWVNAIRKVLTSQ  327 (353)
T ss_dssp             EEEEEEGGGEEEECCBTTBTTEEEEEETTT---TEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeEcccceeeEcCCCCCceEEEEECCC---CcEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence            577889999999999999999999997543   2469999999999999999999999998

>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}

Probab=98.54  E-value=1.1e-07  Score=86.43  Aligned_cols=59  Identities=15%  Similarity=0.155  Sum_probs=51.5

Q ss_pred             CCCccccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865          1 MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      ||+.|+++.++|+ .+.+|++.|+||+++.......|+|+|+|.+.|+.|+++|++.+..
T Consensus       351 ~k~~i~l~~~~v~-~~~~~~~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~  409 (418)
T 3t06_A          351 FSPVLKLNAVLIR-SVATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN  409 (418)
T ss_dssp             CCSEEEGGGEEEE-ECSSCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred             cCCceechhceec-cccccCceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence            6789999999998 5789999999998765444468999999999999999999999753

>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*

Probab=98.25  E-value=1.6e-06  Score=77.22  Aligned_cols=59  Identities=15%  Similarity=0.157  Sum_probs=49.6

Q ss_pred             CCCccccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865          1 MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      ||..|++..++|++ +.+|++.|.||+.+.......|+|+|+|++.|+.|++.|++.+.+
T Consensus       309 ~~~~i~l~~~~v~~-~~~~~~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~~  367 (368)
T 1xcg_A          309 FSPVLKLNAVLIRS-VATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN  367 (368)
T ss_dssp             CCSEEEGGGEEEEE-CSSCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             cCCceEccceeeec-ccCCCceEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence            57788999999987 578999999997654334568999999999999999999998753

>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}

Probab=98.16  E-value=4e-07  Score=68.65  Aligned_cols=41  Identities=12%  Similarity=-0.026  Sum_probs=29.8

Q ss_pred             CCCCCcccccc------chhccccc--ceEEEEecceEEEecCCCCCCC
Q psy12865        105 GNTTDSDKASS------LEAKQLWV--KRLREVIQETYFSSALPLAAPP  145 (227)
Q Consensus       105 ~n~~ds~k~~~------v~~d~~a~--~elsv~~gqtve~le~~~~~p~  145 (227)
                      .|++|+||++|      |++||.|.  .||+|++||+|||||++...|+
T Consensus         5 ~~~~d~~~~~g~~e~~valydF~Ar~~~ELS~~kGd~vevle~~~~~pe   53 (82)
T 1u3o_A            5 SPGIPGSTLSGGCELTVVLQDFSAAHSSELSIQVGQTVELLERPSERPG   53 (82)
T ss_dssp             ---------CCCCEEEECSSCBCCCSTTCCCBCTTCEEEESSCTTSSTT
T ss_pred             CCCcCcccccCCceEEEEEeeecCCCCCeeeEcCCCEEEEEecCCCCCC
Confidence            47888999888      99999998  8999999999999999877777

>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1

Probab=98.12  E-value=3e-06  Score=76.08  Aligned_cols=61  Identities=15%  Similarity=0.194  Sum_probs=50.4

Q ss_pred             CCCccccccccceeeccCCc---eeEEEecCCCC---CCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865          1 MKGRLMTSELGVTEHIEGDE---CKFAVWTGRAP---ISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~---~kFeiW~~r~~---~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ||..|.++.+.|++...+|+   +.|+||+.+..   .....|+|+|+|.+.|+.|+++|++++++.
T Consensus       302 ~k~~i~l~~~~v~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~~~  368 (377)
T 1foe_A          302 FRHMIPTEALQVRALPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDK  368 (377)
T ss_dssp             CEEEEEGGGEEEECCCCTTTTSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred             EeeeccccceEEEecCCCccchhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHhhHH
Confidence            56778899999999887775   67999965421   124579999999999999999999999876

>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A

Probab=97.86  E-value=2.2e-05  Score=69.93  Aligned_cols=55  Identities=16%  Similarity=0.130  Sum_probs=47.2

Q ss_pred             ccccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865          4 RLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus         4 slk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      .|++..+.+.| +.+|++.|.+|++.. .....|+|+|+|.+.|+.|+++|++.++.
T Consensus       318 ~i~l~~~~v~e-~~~~~~~~~~i~~~~-~~~~~~~l~A~s~~ek~~W~~~I~~ai~~  372 (377)
T 3p6a_A          318 VLRLTSAMTRE-VATDHKAFYVLFTWD-QEAQIYELVAQTVSERKNWCALITETAGS  372 (377)
T ss_dssp             EEEGGGEEEEE-CTTCTTEEEEEETTC-TTCCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred             eEechhhhccc-cccccceeEEEecCC-CCCeeEEEecCCHHHHHHHHHHHHHHHHh
Confidence            37788898888 899999999998753 34568999999999999999999999873

>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A

Probab=97.72  E-value=2.9e-05  Score=68.95  Aligned_cols=57  Identities=14%  Similarity=0.325  Sum_probs=47.5

Q ss_pred             CCCccccccccceeeccCC--ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865          1 MKGRLMTSELGVTEHIEGD--ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD--~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ||..|.++.+.|++..+++  ++.|.||....    ..|+|+|+|++.|+.|++.|+++.+.+
T Consensus       293 ~k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~----~~~~l~a~s~~ek~~W~~~i~~~~~~~  351 (354)
T 1dbh_A          293 LKEKFFMRKVQINDKDDTNEYKHAFEIILKDE----NSVIFSAKSAEEKNNWMAALISLQYRS  351 (354)
T ss_dssp             EEEEEESCSCEEEECCCSSSCCSEEEECCTTS----CCEEEECSSHHHHHHHHHHHHHHHTTT
T ss_pred             EEEEEeccceEEEeCCcccccCccEEEecCCC----CEEEEEeCCHHHHHHHHHHHHHHHhhc
Confidence            4677889999999976665  67899997542    359999999999999999999997754

>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A

Probab=97.65  E-value=6e-05  Score=71.77  Aligned_cols=56  Identities=16%  Similarity=0.118  Sum_probs=45.9

Q ss_pred             CccccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865          3 GRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus         3 ~slk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      ..|++..+.+.+ +.+|.+.|.||++.. .....|+|+|+|.+.|+.|+++|++.+.+
T Consensus       470 ~~i~L~~l~v~e-~~~d~~~ffli~~~~-~~~~~~~L~A~S~eEK~~W~~~I~~aI~~  525 (536)
T 3odw_A          470 PVLRLTSAMTRE-VATDHKAFYVLFTWD-QEAQIYELVAQTVSERKNWCALITETAGS  525 (536)
T ss_dssp             SEEEGGGEEEEE-CTTCTTEEEEEEC----CCCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred             ceeecccceeec-ccccCCceEEEecCC-CCceEEEEECCCHHHHHHHHHHHHHHHHh
Confidence            348888887777 888999999998643 24468999999999999999999999874

>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A

Probab=97.54  E-value=0.00011  Score=65.89  Aligned_cols=58  Identities=12%  Similarity=0.152  Sum_probs=44.8

Q ss_pred             CCCccccccccceeeccCCceeE-EEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865          1 MKGRLMTSELGVTEHIEGDECKF-AVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~kF-eiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ||..|+++.+.+++ +.+|++.| .|+.+..  ....|+|+|+|++.|+.|++.|++.+...
T Consensus       313 ~~~~i~l~~~~v~~-~~~d~~~~f~i~~~~~--~~~~~~l~a~s~~ek~~W~~~i~~~i~~~  371 (385)
T 1txd_A          313 FSPVIKLSTVLVRQ-VATDNKALFVISMSDN--GAQIYELVAQTVSEKTVWQDLICRMAASV  371 (385)
T ss_dssp             CCSEEEGGGEEEEE-CCC-CCEEEEEEECSS--CEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCceecccccccc-cccCCceEEEEEEcCC--CceEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence            46778899999887 55666655 5554432  34679999999999999999999998876

>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B

Probab=97.50  E-value=1.4e-05  Score=73.60  Aligned_cols=56  Identities=16%  Similarity=0.266  Sum_probs=0.0

Q ss_pred             CCCccccccccceee--ccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865          1 MKGRLMTSELGVTEH--IEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus         1 yK~slk~s~lGltE~--VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ||+.|.++.+.|++.  .+++++.|+||.+.+     .|+|||+|.+.|+.|+++|++.++..
T Consensus       307 ~k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~-----~~~l~a~s~~ek~~W~~~i~~ai~~~  364 (510)
T 3jzy_A          307 YKTPIFLNEVLVKLPTDPSSDEPVFHISHIDR-----VYTLRTDNINERTAWVQKIKAASEQY  364 (510)
T ss_dssp             ---------------------------------------------------------------
T ss_pred             EcCceehhheEEeccCCCCccccceeeeccce-----eEEeccCCHHHHHHHHHHHHHHHHHH
Confidence            578899999999886  567899999998653     49999999999999999999998766

>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1

Probab=97.31  E-value=0.00017  Score=65.78  Aligned_cols=57  Identities=25%  Similarity=0.373  Sum_probs=46.7

Q ss_pred             CCCccccccccceeeccCCc--------eeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865          1 MKGRLMTSELGVTEHIEGDE--------CKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~--------~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      ||+.|.++.+.|++...|++        ..|.||.+..   ...|+|+|+|++.|+.|++.|++....
T Consensus       300 ~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~---~~~~~l~a~s~~eK~~Wi~~i~~a~~~  364 (402)
T 2dfk_A          300 YKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNKET---EEVHLFFAKKLEEKIRWLRAFREERKM  364 (402)
T ss_dssp             EEEEEEGGGEEEEECCSEECSSSCCEESSEEEEEESSS---SCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             EeeeeeccceEEEecCCCCccccccccceeEEEEECCC---CeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence            67788999999999887653        5899997642   347999999999999999999986443

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D

Probab=97.28  E-value=0.00027  Score=65.17  Aligned_cols=57  Identities=28%  Similarity=0.397  Sum_probs=47.5

Q ss_pred             CCCccccccccceeeccCCc--------eeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865          1 MKGRLMTSELGVTEHIEGDE--------CKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~--------~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      ||+.|.++.+.|++...|+.        ..|.|+.+..   ...|+|+|+|++.|+.|++.|++....
T Consensus       377 ~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~---~~~~~l~a~s~~eK~~W~~~i~~a~~~  441 (466)
T 2pz1_A          377 YKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHRGAT---GDSHLLCTRKPEQKQRWLKAFAREREQ  441 (466)
T ss_dssp             EEEEEETTTCEEEECCSBSCCSSCCCBCEEEEEECSSS---CCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred             EeeeeeccceEEEeCCCCcccccccccceeEEEEeCCC---CeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence            67789999999999887763        6799997542   347999999999999999999998665

>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}

Probab=97.04  E-value=0.00024  Score=64.56  Aligned_cols=57  Identities=21%  Similarity=0.360  Sum_probs=36.6

Q ss_pred             CCCccccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865          1 MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ||..|.++.+.|++...+ ..+|.+|...   ....|+|+|+|++.|+.|+++|++.+.+-
T Consensus       283 ~k~~i~L~~l~v~~~~~~-~~~~~f~i~~---~~~~~~l~a~s~~ek~~W~~~i~~ai~e~  339 (434)
T 3mpx_A          283 LKNTLAVANMKVSRPVME-KVPYALKIET---SESCLMLSASSCAERDEWYGCLSRALPED  339 (434)
T ss_dssp             EEEEEEC-----CCCCCT-TSCSEEEEEC---SSCEEEEECSSHHHHHHHHHHHHHC----
T ss_pred             EEEEEEcCCcEEEecCCC-CCCeeEEEec---CCeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence            567788999999886654 4556655422   22369999999999999999999998764

>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A

Probab=97.02  E-value=0.00081  Score=68.97  Aligned_cols=58  Identities=17%  Similarity=0.348  Sum_probs=47.6

Q ss_pred             CCCccccccccceeeccCCcee--EEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhhc
Q psy12865          1 MKGRLMTSELGVTEHIEGDECK--FAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQETY   62 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~k--FeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q~   62 (227)
                      ||..|.++.+.|++...+++.+  |.|+.+..    ..|+|+|+|.+.|+.|++.|+++.+...
T Consensus       490 ~k~~i~L~~l~V~~~~d~~~~~~~F~I~~~~~----~~~~L~A~S~eeK~~Wi~~I~~~q~k~~  549 (1049)
T 3ksy_A          490 LKEKFFMRKVQINDKDDTNEYKHAFEIILKDE----NSVIFSAKSAEEKNNWMAALISLQYRST  549 (1049)
T ss_dssp             CCCEECCSSCCCCCCCCSSSCCSEEEECCTTS----CCEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEcCceEEEECCCCccccceEEEEcCCC----CEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence            7889999999999998888655  55554332    4699999999999999999999877553

>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A

Probab=97.01  E-value=0.00063  Score=61.61  Aligned_cols=58  Identities=16%  Similarity=0.255  Sum_probs=44.1

Q ss_pred             CCCccccccccceeeccCC------ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865          1 MKGRLMTSELGVTEHIEGD------ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD------~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ||..|.++.+.|.+...++      +..|.|++...   ...|+|+|+|++.|+.|++.|++.+.+.
T Consensus       274 ~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~~~---~~~~~l~a~s~~ek~~W~~~i~~ai~~~  337 (406)
T 2vrw_B          274 LKASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQG---AQGYELFFKTRELKKKWMEQFEMAISNI  337 (406)
T ss_dssp             EEEEEETTTEEEEC--------CTTCEEEEEEETTC---SCEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecccceeeeecCCCCccCCccceeeEEEecCC---CceEEEeCCCHHHHHHHHHHHHHHHhhh
Confidence            4667888889888877665      58899997542   2369999999999999999999998765

>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A

Probab=96.82  E-value=0.00081  Score=64.24  Aligned_cols=58  Identities=17%  Similarity=0.247  Sum_probs=44.6

Q ss_pred             CCCccccccccceeeccCC------ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865          1 MKGRLMTSELGVTEHIEGD------ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD------~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ||..|.++.+.|++...++      ++.|.|+....   ...|+|+|+|.+.|+.|++.|++.+++-
T Consensus       446 ~k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~~---~~~~~L~A~S~eeK~~Wi~~I~~ai~~~  509 (587)
T 3ky9_A          446 LKDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQG---AQGYELFFKTRELKKKWMEQFEMAISNI  509 (587)
T ss_dssp             EEEEEEGGGEEEEEC-----CCCTTCEEEEEEETTC------CEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred             eeeeechhhceeeecCCCCcccccccceeEEEEcCC---CceEEEEeCCHHHHHHHHHHHHHHhhhh
Confidence            5778889999999998775      37899997542   2469999999999999999999998765

>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}

Probab=95.98  E-value=0.012  Score=44.67  Aligned_cols=40  Identities=20%  Similarity=0.407  Sum_probs=32.8

Q ss_pred             cCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         17 EGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        17 egD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      +.+++.|.|-+...    .+|.|+|.|.+..+.||..|+.++..
T Consensus        86 ~~~~~~F~I~t~~~----r~~~l~A~s~~e~~~Wi~ai~~~i~~  125 (128)
T 2rlo_A           86 EEENFEFLIVSSTG----QTWHFEAASFEERDAWVQAIESQILA  125 (128)
T ss_dssp             CCCCCCEEEECTTS----CEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred             ccCCceEEEEcCCC----CEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence            35778999976431    35999999999999999999998764

>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}

Probab=95.91  E-value=0.039  Score=46.63  Aligned_cols=51  Identities=16%  Similarity=0.098  Sum_probs=40.3

Q ss_pred             ccccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865          4 RLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus         4 slk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      .|.+..+.+.+...+.+..|+|-...     ..|.|+|.|.+..+.|+..|++++.
T Consensus       105 ~I~L~~~~~v~~~~~k~~~F~I~t~~-----r~~~l~A~s~~e~~~Wv~aL~~~i~  155 (228)
T 3tfm_A          105 TVEVRSAKEIIDNTNKENGIDIIMAD-----RTFHLIAESPEDASQWFSVLSQVHS  155 (228)
T ss_dssp             EEEGGGCSEEEEETTTTSEEEEECSS-----CEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred             EEEcCCCEEeccCCCCCcEEEEEcCC-----cEEEEEcCCHHHHHHHHHHHHHHHh
Confidence            34555555556666778899996533     4699999999999999999999986

>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.84  E-value=0.022  Score=42.58  Aligned_cols=41  Identities=27%  Similarity=0.425  Sum_probs=34.3

Q ss_pred             cCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         17 EGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        17 egD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ..+++.|+|-....    .+|.|+|.|.+..+.|+..|++++...
T Consensus        66 ~~~~~~F~i~~~~~----r~~~l~a~s~~e~~~Wi~al~~~~~~~  106 (120)
T 2d9x_A           66 DEDSHTFTVNAASG----EQYKLRATDAKERQHWVSRLQICTQHH  106 (120)
T ss_dssp             SSSSSCEEECCSSS----CCEEECCSSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEEcCCC----CEEEEECCCHHHHHHHHHHHHHHHHHh
Confidence            45789999986431    359999999999999999999998766

>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A

Probab=95.83  E-value=0.013  Score=45.44  Aligned_cols=55  Identities=27%  Similarity=0.361  Sum_probs=38.1

Q ss_pred             ccccccccceeeccC----------CceeEEEecCCCC--CCCceEEEEcCCHHHHHHHHHHHHHHH
Q psy12865          4 RLMTSELGVTEHIEG----------DECKFAVWTGRAP--ISDCRILLKASSLEAKQLWVKRLREVI   58 (227)
Q Consensus         4 slk~s~lGltE~Veg----------D~~kFeiW~~r~~--~s~~~~iLQAss~evK~~Wvk~IreiL   58 (227)
                      +|.+.+.-|.+....          .+++|+|-.....  .....|+|+|.|.+..+.|++.|+.+.
T Consensus        51 sI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~  117 (120)
T 4a6h_A           51 SLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILT  117 (120)
T ss_dssp             EEEGGGEEEEEECCCCC---------CCEEEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred             EEECCCCEEEEcccccccccccccCCCcEEEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence            344555555554433          6789999854421  012479999999999999999999873

>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1

Probab=95.58  E-value=0.023  Score=40.61  Aligned_cols=38  Identities=16%  Similarity=0.269  Sum_probs=31.5

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      .+..|.|-....    ..|.|+|.|.+..+.|+..|+.++..
T Consensus        69 ~~~~F~i~~~~~----r~~~l~a~s~~e~~~Wi~ai~~~i~~  106 (108)
T 1u5d_A           69 KESCFELTSQDR----RTYEFTATSPAEARDWVDQISFLLKD  106 (108)
T ss_dssp             GGGEEEEECSSS----CCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             CcceEEEEcCCC----cEEEEECCCHHHHHHHHHHHHHHHHh
Confidence            467899986432    34999999999999999999999864

>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A

Probab=95.55  E-value=0.026  Score=40.69  Aligned_cols=36  Identities=19%  Similarity=0.419  Sum_probs=30.0

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHH
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVI   58 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL   58 (227)
                      .+..|.|-....    ..|.|+|.|.+..+.|+..|+.++
T Consensus        73 ~~~~F~i~~~~~----~~~~l~a~s~~e~~~Wi~ai~~~~  108 (109)
T 2i5f_A           73 EENLFEIITADE----VHYFLQAATPKERTEWIKAIQMAS  108 (109)
T ss_dssp             CCSEEEEECTTC----CEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CceEEEEEeCCC----CEEEEEcCCHHHHHHHHHHHHHHh
Confidence            578899986532    249999999999999999999874

>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.51  E-value=0.023  Score=42.60  Aligned_cols=52  Identities=23%  Similarity=0.212  Sum_probs=38.2

Q ss_pred             cccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865          5 LMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus         5 lk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      |.+..+-+.......+..|+|-...     ..|.|+|.|.+..+.|+..|+.++.+.
T Consensus        55 I~L~~~~~~~~~~~~~~~F~i~~~~-----r~~~l~a~s~~e~~~Wi~al~~~~~~~  106 (119)
T 2dhk_A           55 IDLSSAVFDCKADAEEGIFEIKTPS-----RVITLKAATKQAMLYWLQQLQMKRWEF  106 (119)
T ss_dssp             EEGGGCEEEECTTGGGCEEEEECSS-----CCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCEEEecCCCCCCEEEEEeCC-----cEEEEECCCHHHHHHHHHHHHHHHHHh
Confidence            4444444444445567899997643     359999999999999999999987543

>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1

Probab=95.49  E-value=0.0044  Score=48.82  Aligned_cols=29  Identities=24%  Similarity=0.454  Sum_probs=25.2

Q ss_pred             CCCccc--cccchH-HHHHHHHHHHHHHHhhhc
Q psy12865        144 PPKSPA--SASSLE-AKQLWVKRLREVIQETYF  173 (227)
Q Consensus       144 p~k~vl--Kass~e-~Kq~WVk~iREViQE~~l  173 (227)
                      |...++  +|++.| .|+.||+.||+ +||+|-
T Consensus        84 ~~~~il~~qA~s~e~~K~~Wv~~I~~-~~~~~~  115 (119)
T 1fho_A           84 PSFRIKPKDFETSEYVRKAWLRDIAE-EQEKYA  115 (119)
T ss_dssp             CCBCCCCCSSSSCSHHHHHHHHHHHT-CCHHHH
T ss_pred             CceEEEeeecCCcHHHHHHHHHHHHH-HHHHHh
Confidence            555667  999999 99999999999 899863

>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=95.40  E-value=0.024  Score=42.30  Aligned_cols=37  Identities=19%  Similarity=0.355  Sum_probs=30.5

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      .++.|.|-....    ..|.|+|.|.+..+.|+..|++++.
T Consensus        88 ~~~~F~I~~~~~----r~~~l~a~s~~e~~~Wi~al~~~~~  124 (129)
T 1x1g_A           88 QGNLFKVITKDD----THYYIQASSKAERAEWIEAIKKLTS  124 (129)
T ss_dssp             CSSCEEECCTTC----CCEEECCSSHHHHHHHHHHHHHHSS
T ss_pred             CCceEEEEcCCC----CEEEEEcCCHHHHHHHHHHHHHHHh
Confidence            468899986432    2499999999999999999999864

>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A

Probab=95.29  E-value=0.027  Score=40.54  Aligned_cols=49  Identities=12%  Similarity=0.204  Sum_probs=35.1

Q ss_pred             cccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHH
Q psy12865          5 LMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVI   58 (227)
Q Consensus         5 lk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL   58 (227)
                      |.+....+.. ...+++.|.|-...    ..+|.|+|.|.+..+.|+..|+..+
T Consensus        44 i~L~~~~v~~-~~~~~~~F~i~~~~----~r~~~l~a~s~~e~~~Wi~al~~a~   92 (103)
T 3rcp_A           44 IKMAVCEIKV-HSADNTRMELIIPG----EQHFYMKAVNAAERQRWLVALGSSK   92 (103)
T ss_dssp             EEGGGCEEEC-CTTCSSEEEEEETT----TEEEEEECSSHHHHHHHHHHHHTTS
T ss_pred             EEeeeeEEEE-cCCCCceEEEEeCC----CCEEEEECCCHHHHHHHHHHHHHHH
Confidence            3344333333 24578899998632    2369999999999999999998763

>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A

Probab=95.21  E-value=0.03  Score=41.93  Aligned_cols=38  Identities=18%  Similarity=0.409  Sum_probs=31.5

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      .+..|+|-....    ..|.|+|.|.+..+.|+..|+.++..
T Consensus        84 ~~~~F~i~~~~~----~~~~l~a~s~~e~~~Wi~al~~~~~~  121 (129)
T 1x05_A           84 EENLFEIITADE----VHYFLQAATPKERTEWIKAIQMASRT  121 (129)
T ss_dssp             SCSEEEEECTTC----CCCEEECSSHHHHHHHHHHHHHHHTC
T ss_pred             CCeEEEEEcCCC----CEEEEECCCHHHHHHHHHHHHHHHHc
Confidence            578999986532    23999999999999999999998753

>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=95.14  E-value=0.041  Score=40.42  Aligned_cols=37  Identities=19%  Similarity=0.387  Sum_probs=32.1

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      +..|.|-...     ..|.|+|.|.+..+.|+..|++++..+
T Consensus        65 ~~~F~i~~~~-----r~~~l~a~s~~e~~~Wi~~l~~~~~~~  101 (115)
T 2cod_A           65 DNKFEVVTTQ-----RTFVFRVEKEEERNDWISILLNALKSQ  101 (115)
T ss_dssp             TTEEEEEESS-----CCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEeCC-----cEEEEECCCHHHHHHHHHHHHHHHHhC
Confidence            6889997433     359999999999999999999999877

>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.03  E-value=0.055  Score=39.31  Aligned_cols=40  Identities=25%  Similarity=0.401  Sum_probs=33.2

Q ss_pred             cCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         17 EGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        17 egD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      .+.++.|.|-...     ..|.|+|.|.+..+.|+..|+.++...
T Consensus        66 ~~~~~~F~i~~~~-----r~~~l~a~s~~e~~~Wi~ai~~~~~~~  105 (115)
T 2dn6_A           66 DGKKCLFLVKCFD-----KTFEISASDKKKKQEWIQAIHSTIHLL  105 (115)
T ss_dssp             TTCCSEEEEECSS-----CEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCeeEEEEEeCC-----CEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence            4567899996543     359999999999999999999998754

>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=94.97  E-value=0.074  Score=38.81  Aligned_cols=41  Identities=20%  Similarity=0.335  Sum_probs=33.4

Q ss_pred             cCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         17 EGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        17 egD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      .+.+..|.|-....    .+|.|+|.|.+..+.|+..|+.++...
T Consensus        63 ~~~~~~F~i~~~~~----r~~~l~a~s~~e~~~Wi~ai~~~~~~~  103 (113)
T 1pls_A           63 GKRMFVFKITTTKQ----QDHFFQAAFLEERDAWVRDINKAIKCI  103 (113)
T ss_dssp             CCSSSEEEEEETTT----EEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCccEEEEEcCCC----CEEEEECCCHHHHHHHHHHHHHHHhcc
Confidence            44567899986432    359999999999999999999998755

>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}

Probab=94.87  E-value=0.06  Score=43.23  Aligned_cols=52  Identities=27%  Similarity=0.480  Sum_probs=37.1

Q ss_pred             cccccccceeeccCC--------ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865          5 LMTSELGVTEHIEGD--------ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus         5 lk~s~lGltE~VegD--------~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      |.+..+-..+.+..+        ...|.|-...     .+|.|+|.|.+..+.||..|++++...
T Consensus        64 I~L~~~~~v~~~~~~~~~~~~~~~~~f~i~t~~-----rt~~l~A~s~~e~~~Wi~aL~~~i~~n  123 (164)
T 2lul_A           64 IDVSKIKCVEIVKNDDGVIPCQNKYPFQVVHDA-----NTLYIFAPSPQSRDLWVKKLKEEIKNN  123 (164)
T ss_dssp             EEGGGCCEEEECCCCSSSCCSSSCSEEEEECSS-----CEEEEECSSHHHHHHHHHHHHHHHTTC
T ss_pred             EEEeeeEEEEeccccccCcccccceeEEEecCC-----cEEEEECCCHHHHHHHHHHHHHHHHHC
Confidence            444554444444433        3467776544     359999999999999999999998754

>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=94.78  E-value=0.021  Score=45.75  Aligned_cols=55  Identities=22%  Similarity=0.462  Sum_probs=42.1

Q ss_pred             CCCccccccccceee--ccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865          1 MKGRLMTSELGVTEH--IEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus         1 yK~slk~s~lGltE~--VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      ||..|.+..|-|++.  .++.++.|+|-...    .++|++.|+|.+.|+.|+.+|..++.
T Consensus        70 ~kgklPL~g~~V~~~ed~~~~~~aFeI~g~~----~~~i~v~~~s~eE~~~Wl~~L~~~i~  126 (132)
T 1v61_A           70 YQGKIPIAGMVVNRLDEIEGSDCMFEITGST----VERIVVHCNNNQDFQEWMEQLNRLTK  126 (132)
T ss_dssp             EEEEECTTTCBCSTTCSSSSSCCCEEEECSS----SCEEEECCCCSHHHHHHHHHHHHHHT
T ss_pred             EEEEEecceeEEEeccccccCccEEEEecCC----CceEEEEeCCHHHHHHHHHHHHHHHh
Confidence            455666776766653  45678899998533    24699999999999999999998754

>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=94.71  E-value=0.062  Score=41.39  Aligned_cols=40  Identities=20%  Similarity=0.253  Sum_probs=33.1

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      +.+..|+|-....    ..|.|+|.|.+..+.|+..|++++...
T Consensus        87 ~~~~~F~i~~~~~----r~~~l~A~s~~e~~~Wi~al~~ai~~~  126 (150)
T 1wg7_A           87 VRRFAFELKMQDK----SSYLLAADSEVEMEEWITILNKILQLN  126 (150)
T ss_dssp             SCTTEEEEECSSS----CEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEEeCCC----cEEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence            5667899986531    259999999999999999999998754

>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=94.64  E-value=0.1  Score=38.87  Aligned_cols=39  Identities=13%  Similarity=0.201  Sum_probs=31.2

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      ..+..|.|-....    ..|.|||.|.+..+.|+..|+.++..
T Consensus        80 ~r~~~F~i~~~~~----~~~~f~A~s~~e~~~Wi~ai~~~~~~  118 (123)
T 1wjm_A           80 KRKHVFKLGLQDG----KEYLFQAKDEAEMSSWLRVVNAAIAS  118 (123)
T ss_dssp             SCSSEEEEECSSS----CEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEEcCC----cEEEEECCCHHHHHHHHHHHHHHHhc
Confidence            3467899975321    35999999999999999999998763

>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1

Probab=94.59  E-value=0.098  Score=38.51  Aligned_cols=39  Identities=21%  Similarity=0.284  Sum_probs=33.2

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      +.+..|+|-...     ..|.|+|.|.+..+.|+..|+.++..+
T Consensus        75 ~~~~~F~i~~~~-----r~~~l~a~s~~e~~~W~~al~~~i~~~  113 (125)
T 1eaz_A           75 MRDNLFEIVTTS-----RTFYVQADSPEEMHSWIKAVSGAIVAQ  113 (125)
T ss_dssp             TCSSEEEEECSS-----CEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred             CcCCEEEEEeCC-----cEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence            457889998543     369999999999999999999998765

>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*

Probab=94.58  E-value=0.053  Score=43.99  Aligned_cols=36  Identities=19%  Similarity=0.388  Sum_probs=30.4

Q ss_pred             eeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         21 CKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        21 ~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ..|.|-...     .+|.|+|.|.+..+.||+.|+.++...
T Consensus        99 ~~F~I~t~~-----rt~yl~A~s~~E~~eWi~aI~~~i~~n  134 (169)
T 1btk_A           99 YPFQVVYDE-----GPLYVFSPTEELRKRWIHQLKNVIRYN  134 (169)
T ss_dssp             EEEEEEETT-----CCEEEEESCHHHHHHHHHHHHHHHTTC
T ss_pred             ccEEEEeCC-----ceEEEEcCCHHHHHHHHHHHHHHHHHC
Confidence            678887644     259999999999999999999998754

>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*

Probab=94.20  E-value=0.077  Score=40.75  Aligned_cols=37  Identities=22%  Similarity=0.325  Sum_probs=30.1

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      +..|+|-....    ..|.|||.|.+..+.|++.|+.++..
T Consensus        89 ~~~F~l~t~~~----~~yl~qA~s~~e~~~Wi~aI~~~i~~  125 (129)
T 2p0d_A           89 RNVLHIRTIPG----HEFLLQSDHETELRAWHRALRTVIER  125 (129)
T ss_dssp             SSEEEEECTTS----CEEEEECSCHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEcCCC----CEEEEECCCHHHHHHHHHHHHHHHHh
Confidence            45799875321    25999999999999999999999875

>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A

Probab=94.17  E-value=0.062  Score=40.93  Aligned_cols=40  Identities=15%  Similarity=0.268  Sum_probs=30.4

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      .+..|.|-+...  ....|.|+|.|.|..+.|++.|+++.+.
T Consensus        81 k~~~F~I~~~~~--~~~~~~~~A~s~ee~~~Wi~ai~~a~~~  120 (124)
T 2w2x_D           81 KSFVFILEPKQQ--GDPPVEFATDKVEELFEWFQSIREITWK  120 (124)
T ss_dssp             BSEEEEEEECC----CCCEEEEECCCHHHHHHHHHHHHHHC-
T ss_pred             CCEEEEEECCCC--CCceEEEEECCHHHHHHHHHHHHHHHHh
Confidence            446788876542  1235999999999999999999998653

>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}

Probab=94.16  E-value=0.062  Score=41.01  Aligned_cols=37  Identities=19%  Similarity=0.267  Sum_probs=29.3

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      +..|.|.....    ..|.|||.|.+..+.|++.|+..+++
T Consensus        88 k~vF~l~t~~~----~~ylfqA~s~~e~~~Wi~aI~~aI~~  124 (124)
T 3pp2_A           88 KNVLELRSRDG----SEYLIQHDSEAIISTWHKAIAQGIQE  124 (124)
T ss_dssp             SSEEEEECTTS----CEEEEECSCHHHHHHHHHHHHHHHC-
T ss_pred             ceEEEEECCCC----CEEEEECCCHHHHHHHHHHHHHHHhC
Confidence            56688874321    35999999999999999999998753

>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B

Probab=94.16  E-value=0.075  Score=39.77  Aligned_cols=38  Identities=21%  Similarity=0.328  Sum_probs=30.7

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      .+..|+|-.....    .|.|||.|.+..+.|++.|+..+..
T Consensus        65 r~~~F~l~~~~~~----~y~f~A~s~ee~~~Wi~ai~~~~~~  102 (112)
T 3cxb_B           65 RPHAFQVILSDRP----CLELSAESEAEMAEWMQHLCQAVSK  102 (112)
T ss_dssp             CTTEEEEEETTSC----CEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred             CCeEEEEEcCCCC----EEEEEcCCHHHHHHHHHHHHHHhhc
Confidence            4578999854322    4999999999999999999988764

>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=94.05  E-value=0.12  Score=41.53  Aligned_cols=38  Identities=18%  Similarity=0.266  Sum_probs=31.4

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ..+.|+|-+..     .+|.|+|.|.+..+.|++.|+.++.-+
T Consensus        78 ~~~~F~I~t~~-----r~~~f~A~s~ee~~eWi~aI~~v~~~~  115 (149)
T 1x1f_A           78 NCAKFTLVLPK-----EEVQLKTENTESGEEWRGFILTVTELS  115 (149)
T ss_dssp             CCCEEEEECSS-----CCEEEECSSHHHHHHHHHHHHHHHHSS
T ss_pred             cCcEEEEEcCC-----CEEEEEcCCHHHHHHHHHHHHHHHccc
Confidence            35789998643     359999999999999999999997743

>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*

Probab=94.01  E-value=0.17  Score=37.13  Aligned_cols=44  Identities=18%  Similarity=0.272  Sum_probs=33.6

Q ss_pred             CCceeEEEecCCCC-----------------CCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         18 GDECKFAVWTGRAP-----------------ISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        18 gD~~kFeiW~~r~~-----------------~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      +.+..|+|......                 .....|.|+|.|.+..+.|+..|+.++...
T Consensus        62 ~~~~~f~i~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~  122 (127)
T 1fgy_A           62 RKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRD  122 (127)
T ss_dssp             SCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHHC
T ss_pred             CCCceEEEecCCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhccC
Confidence            45678998854321                 112479999999999999999999998754

>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.97  E-value=0.094  Score=38.54  Aligned_cols=39  Identities=15%  Similarity=0.262  Sum_probs=30.5

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      +.+..|+|-...    ...|.|+|.|.+..+.|+..|++++.-
T Consensus        83 ~~~~~F~i~~~~----~r~~~l~a~s~~e~~~Wi~al~~a~~~  121 (122)
T 2yry_A           83 SRKHTFKAEHAG----VRTYFFSAESPEEQEAWIQAMGEAARV  121 (122)
T ss_dssp             SSSSEEEEECSS----SCEEEEECSSHHHHHHHHHHHHHHHCC
T ss_pred             CcccEEEEecCC----CcEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence            346689985322    235999999999999999999988653

>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A

Probab=93.96  E-value=0.12  Score=38.46  Aligned_cols=38  Identities=18%  Similarity=0.114  Sum_probs=32.2

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      +.+..|+|-+..     ..|.|+|.|.+..+.|+..|+.++..
T Consensus        76 ~~~~~F~i~~~~-----r~~~l~a~s~~e~~~Wi~al~~~i~~  113 (126)
T 1fao_A           76 ERVNCFCLVFPF-----RTFYLCAKTGVEADEWIKILRWKLSQ  113 (126)
T ss_dssp             SSSSEEEEEETT-----EEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEEeCC-----cEEEEECCCHHHHHHHHHHHHHHHHH
Confidence            456789998643     36999999999999999999999875

>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}

Probab=93.91  E-value=0.038  Score=39.26  Aligned_cols=35  Identities=23%  Similarity=0.555  Sum_probs=29.4

Q ss_pred             cCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHH
Q psy12865         17 EGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLRE   56 (227)
Q Consensus        17 egD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Ire   56 (227)
                      ..+++.|+|-.+.     .+|.|+|.|.+..+.|+..|.+
T Consensus        57 ~~~~~~F~i~~~~-----r~~~l~A~s~~e~~~Wi~aLq~   91 (94)
T 2rsg_A           57 DFDECRFDISVND-----SVWYLRAQDPDHRQQWIDAIEQ   91 (94)
T ss_dssp             SSCSSEEEEEETT-----EEEEEECCSSCCTHHHHHHHHH
T ss_pred             cccceeEEEEeCC-----eEEEEECCCHHHHHHHHHHHHh
Confidence            4577899998654     3599999999999999999875

>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1

Probab=93.84  E-value=0.091  Score=39.41  Aligned_cols=37  Identities=19%  Similarity=0.236  Sum_probs=29.4

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      -+..|.|-...    ...|.|||.|.+..+.|++.|+.++.
T Consensus        83 r~~~F~l~t~~----~~~~lfqA~s~~e~~~Wi~ai~~~i~  119 (122)
T 1dro_A           83 KKHVLRVKLAN----GALFLLQAHDDTEMSQWVTSLKAQSD  119 (122)
T ss_dssp             STTEEEEECSS----SCEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred             CCeEEEEEEcC----CCEEEEECCCHHHHHHHHHHHHHHHH
Confidence            35678887422    13599999999999999999998875

>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=93.66  E-value=0.17  Score=36.66  Aligned_cols=41  Identities=27%  Similarity=0.313  Sum_probs=31.1

Q ss_pred             CceeEEEecCCCC---CCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865         19 DECKFAVWTGRAP---ISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus        19 D~~kFeiW~~r~~---~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      .+..|+|-.....   .....|.|+|.|.+..+.|+..|++++.
T Consensus        69 ~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~  112 (118)
T 1v89_A           69 GKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAG  112 (118)
T ss_dssp             CCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             CcceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence            4668998752100   1334699999999999999999999876

>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=93.61  E-value=0.13  Score=40.03  Aligned_cols=26  Identities=15%  Similarity=0.414  Sum_probs=23.2

Q ss_pred             eEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         36 RILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        36 ~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      .|+|+|.|.+..+.|++.|+.++..+
T Consensus       101 ~~~f~A~s~~e~~~Wi~ai~~a~~~~  126 (130)
T 1v88_A          101 YLIIRATSESDGRCWMDALELALKSG  126 (130)
T ss_dssp             CCEEECSSHHHHHHHHHHHHHHHTTT
T ss_pred             EEEEECCCHHHHHHHHHHHHHHHhcC
Confidence            49999999999999999999987644

>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=93.58  E-value=0.094  Score=38.08  Aligned_cols=37  Identities=16%  Similarity=0.267  Sum_probs=29.5

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      .+..|.|-....    ..|.|+|.|.+..+.|+..|+....
T Consensus        67 ~~~~F~i~~~~~----~~~~~~a~s~~e~~~Wi~al~~a~~  103 (109)
T 1wgq_A           67 ESKVFQLLHKGM----VFYVFKADDAHSTQRWIDAFQEGTV  103 (109)
T ss_dssp             SSSEEEEEETTE----EEEEEECSSHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEEeCCC----eEEEEECCCHHHHHHHHHHHHHHhc
Confidence            357899975321    2499999999999999999998854

>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A

Probab=93.43  E-value=0.13  Score=36.80  Aligned_cols=35  Identities=14%  Similarity=0.290  Sum_probs=27.8

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHH
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLRE   56 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Ire   56 (227)
                      +.+..|.|-...    ...|.|||.|.+..+.|+..|+.
T Consensus        71 ~~~~~F~i~~~~----~~~~~~~A~s~~e~~~Wi~ai~~  105 (106)
T 1btn_A           71 KKKHVFKLRLSD----GNEYLFQAKDDEEMNTWIQAISS  105 (106)
T ss_dssp             SSSSEEEEECTT----SCEEEEECSSHHHHHHHHHHHHH
T ss_pred             CCccEEEEEecC----CCEEEEECCCHHHHHHHHHHHhc
Confidence            346789997432    13699999999999999999874

>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}

Probab=93.24  E-value=0.14  Score=37.95  Aligned_cols=38  Identities=11%  Similarity=0.181  Sum_probs=30.6

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      +.+..|+|-....    ..|.|+|.|.+..+.|+..|++...
T Consensus        82 ~~~~~F~i~~~~~----r~~~l~a~s~~e~~~Wi~al~~a~~  119 (128)
T 2dkp_A           82 NRKYAFKAAHPNM----RTYYFCTDTGKEMELWMKAMLDAAL  119 (128)
T ss_dssp             SSCSEEEEECSSS----CCEEEECSSHHHHHHHHHHHHHHHS
T ss_pred             CCCeEEEEEcCCC----CEEEEEcCCHHHHHHHHHHHHHHHh
Confidence            4566899986432    2499999999999999999998754

>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1

Probab=93.13  E-value=0.09  Score=38.26  Aligned_cols=35  Identities=23%  Similarity=0.348  Sum_probs=28.5

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHH
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVI   58 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL   58 (227)
                      ..+.|+|-..     ..+|.|+|.|.+..+.|+..|+.++
T Consensus        76 ~~~~F~i~~~-----~r~~~l~a~s~~e~~~Wi~al~~~i  110 (117)
T 1v5u_A           76 EKAFFDVKTT-----RRVYNFCAQDVPSAQQWVDRIQSCL  110 (117)
T ss_dssp             TTTCEEEEES-----SCEEEEECSSHHHHHHHHHHHHTTC
T ss_pred             CCeEEEEECC-----CceEEEECCCHHHHHHHHHHHHHHh
Confidence            3478999543     3469999999999999999998764

>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*

Probab=93.08  E-value=0.22  Score=36.52  Aligned_cols=38  Identities=18%  Similarity=0.260  Sum_probs=29.6

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      .+..|.|-....    ..|.|+|.|.+..+.|+..|+.++..
T Consensus        73 ~~~~f~i~~~~~----r~~~l~a~s~~e~~~Wi~al~~a~~~  110 (123)
T 1upq_A           73 RRFTFTAEHPGM----RTYVLAADTLEDLRGWLRALGRASRA  110 (123)
T ss_dssp             SSSEEEEECTTS----CCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred             CcEEEEEECCCC----eEEEEECCCHHHHHHHHHHHHHHHhc
Confidence            466778764331    35999999999999999999998754

>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.06  E-value=0.11  Score=37.86  Aligned_cols=39  Identities=15%  Similarity=0.262  Sum_probs=30.1

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      +.+..|+|-...    ...|.|+|.|.+..+.|+..|++++..
T Consensus        72 ~~~~~F~i~~~~----~r~~~l~a~s~~e~~~Wi~al~~~~~~  110 (117)
T 2d9y_A           72 SRKHTFKAEHAG----VRTYFFSAESPEEQEAWIQAMGEAARV  110 (117)
T ss_dssp             CCSSEEEEECSS----SCEEEEECSSHHHHHHHHHHHHHTTCC
T ss_pred             CCccEEEEEcCC----CcEEEEEcCCHHHHHHHHHHHHHHHhh
Confidence            345689986422    235999999999999999999987543

>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=93.05  E-value=0.23  Score=37.70  Aligned_cols=39  Identities=18%  Similarity=0.196  Sum_probs=31.3

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      +.++.|.|-+...    .+|.|+|.|.+..+.|+..|+.+...
T Consensus        77 ~~~~~F~I~~~~~----r~~~l~A~s~~e~~~Wi~al~~a~~~  115 (130)
T 2d9v_A           77 SRDGLLTVNLREG----SRLHLCAETRDDAIAWKTALMEANST  115 (130)
T ss_dssp             CTTTEEEEEETTS----CEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred             CcCcEEEEEeCCC----CEEEEEcCCHHHHHHHHHHHHHHHcC
Confidence            4567899976321    25999999999999999999998653

>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A

Probab=92.93  E-value=0.12  Score=39.82  Aligned_cols=36  Identities=22%  Similarity=0.453  Sum_probs=30.1

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      ++.|.|-....    ..|.|+|.|.+..+.|+..|++++.
T Consensus        84 ~~~F~I~~~~~----r~~~l~a~s~~e~~~Wi~al~~~i~  119 (148)
T 1u5f_A           84 DCCFEICAPDK----RIYQFTAASPKDAEEWVQQLKFILQ  119 (148)
T ss_dssp             GGEEEEECTTS----CEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred             ccEEEEECCCC----cEEEEECCCHHHHHHHHHHHHHHHH
Confidence            57899986431    2599999999999999999999865

>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.85  E-value=0.17  Score=37.31  Aligned_cols=41  Identities=15%  Similarity=0.221  Sum_probs=33.0

Q ss_pred             ccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         16 IEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        16 VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ..+.+..|.|-..     ..+|.|+|.|.+..+.|+..|+..+..-
T Consensus        63 ~~~~~~~F~I~~~-----~r~~~l~a~s~~e~~~Wi~al~~~~~~~  103 (114)
T 2da0_A           63 NAEDKKSFDLISH-----NRTYHFQAEDEQDYVAWISVLTNSKEEA  103 (114)
T ss_dssp             CSSSSSCEEEEET-----TEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEEcC-----CcEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence            3556778999843     2469999999999999999999987543

>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A

Probab=92.70  E-value=0.17  Score=36.75  Aligned_cols=35  Identities=20%  Similarity=0.265  Sum_probs=28.9

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHH
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVI   58 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL   58 (227)
                      ++.|.|-...    ...|.|+|.|.+..+.|+..|++..
T Consensus        76 ~~~F~i~~~~----~r~~~l~a~s~~e~~~Wi~al~~a~  110 (112)
T 3aj4_A           76 DCMLQIVCRD----GKTISLCAESTDDCLAWKFTLQDSR  110 (112)
T ss_dssp             GGEEEEEETT----SCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEecC----CcEEEEEeCCHHHHHHHHHHHHHHh
Confidence            6789997432    2359999999999999999999875

>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=92.17  E-value=0.16  Score=37.06  Aligned_cols=37  Identities=19%  Similarity=0.150  Sum_probs=29.9

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHH
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVI   58 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL   58 (227)
                      +.+..|.|-...    ...|.|+|.|.+..+.|+..|++.+
T Consensus        64 ~~~~~F~i~~~~----~r~~~l~A~s~~e~~~Wi~al~~~~  100 (107)
T 2cof_A           64 DHLYSFRILHKG----EELAKLEAKSSEEMGHWLGLLLSES  100 (107)
T ss_dssp             TBSCEEEEEETT----EEEEEEECSSHHHHHHHHHHHHHHS
T ss_pred             CCCeEEEEEeCC----CeEEEEEcCCHHHHHHHHHHHHHHH
Confidence            346789998642    2359999999999999999999874

>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=92.09  E-value=0.064  Score=37.98  Aligned_cols=33  Identities=3%  Similarity=-0.192  Sum_probs=27.8

Q ss_pred             Cccccccchhccccc--ceEEEEecceEEEecCCC
Q psy12865        109 DSDKASSLEAKQLWV--KRLREVIQETYFSSALPL  141 (227)
Q Consensus       109 ds~k~~~v~~d~~a~--~elsv~~gqtve~le~~~  141 (227)
                      .......++.||.+.  .||++++||.|.|++...
T Consensus        11 ~~~~~~~Alydy~~~~~~eLs~~~Gd~i~vl~~~~   45 (79)
T 1uhc_A           11 EGNQVYFAVYTFKARNPNELSVSANQKLKILEFKD   45 (79)
T ss_dssp             CSSCCEEESSCBCCCSSSBCCBCTTCEEEEEESCC
T ss_pred             CCCeEEEECccCCCCCCCccCCCCCCEEEEEECCC
Confidence            344566799999998  899999999999999753

>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A

Probab=91.89  E-value=0.23  Score=36.87  Aligned_cols=43  Identities=9%  Similarity=0.132  Sum_probs=33.3

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      +.+..|.|-.... .....|.|+|.|.+..+.|+..|+.++...
T Consensus        70 ~~~~~F~I~~~~~-~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~  112 (125)
T 1unq_A           70 PRPNTFIIRCLQW-TTVIERTFHVETPEEREEWTTAIQTVADGL  112 (125)
T ss_dssp             SSTTEEEEEEEET-TEEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEecCC-CCceeEEEEeCCHHHHHHHHHHHHHHHhhc
Confidence            5678999985321 123469999999999999999999987654

>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}

Probab=91.57  E-value=0.041  Score=38.15  Aligned_cols=29  Identities=14%  Similarity=-0.161  Sum_probs=24.6

Q ss_pred             cccchhccccc--ce-EEEEecceEEEecCCC
Q psy12865        113 ASSLEAKQLWV--KR-LREVIQETYFSSALPL  141 (227)
Q Consensus       113 ~~~v~~d~~a~--~e-lsv~~gqtve~le~~~  141 (227)
                      ...++.||.|.  +| |++++||.++|++...
T Consensus         5 ~~rAlydy~~~~~~e~Ls~~~Gd~i~v~~~~~   36 (60)
T 2lx7_A            5 RCRTLYPFSGERHGQGLRFAAGELITLLQVPD   36 (60)
T ss_dssp             EEEESCCCCSCCCSSCCCCCTTCEEEBSCCCT
T ss_pred             EEEECcccCCCCCCCCccCCCCCEEEEeEecC
Confidence            45699999997  66 9999999999998643

>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1

Probab=91.23  E-value=0.18  Score=41.45  Aligned_cols=46  Identities=33%  Similarity=0.329  Sum_probs=33.9

Q ss_pred             ceEEEEe-----cceEEEecCCCCCCCCccccccchHHHHHHHHHHHHHHH
Q psy12865        124 KRLREVI-----QETYFSSALPLAAPPKSPASASSLEAKQLWVKRLREVIQ  169 (227)
Q Consensus       124 ~elsv~~-----gqtve~le~~~~~p~k~vlKass~e~Kq~WVk~iREViQ  169 (227)
                      +.+....     .+.|+-+..|.....-.++.|.|-|-.++||++|||++|
T Consensus        98 c~V~~~~~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~  148 (150)
T 2fjl_A           98 CQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQ  148 (150)
T ss_dssp             CEEEEETTCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred             cEEEeccCCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence            5555543     345777776655333367799999999999999999987

>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}

Probab=90.93  E-value=0.29  Score=39.76  Aligned_cols=58  Identities=17%  Similarity=0.173  Sum_probs=36.3

Q ss_pred             CCccccccccceeeccCCceeEEEe--cCCCCC--CCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865          2 KGRLMTSELGVTEHIEGDECKFAVW--TGRAPI--SDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus         2 K~slk~s~lGltE~VegD~~kFeiW--~~r~~~--s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ++++.+..|-+.+. +..+--|.|+  ... +.  ....++|+|+|.+.+..|+.+|++-+.+-
T Consensus        63 r~~~~L~gm~V~~~-e~e~~p~~~~l~s~~-~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e~  124 (140)
T 3qwm_A           63 RQSFSLYGMQVLLF-ENQYYPNGIRLTSSV-PGADIKVLINFNAPNPQDRKKFTDDLRESIAEV  124 (140)
T ss_dssp             EEEECCTTEEEEEE-CCSSCTTEEEEEECC-TTSCCEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeeecceEEEcc-cCCCCceEEEEEecC-CCCcceEEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence            34455555544443 3333445555  322 11  12358999999999999999999987653

>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}

Probab=90.91  E-value=0.29  Score=37.55  Aligned_cols=41  Identities=32%  Similarity=0.333  Sum_probs=31.3

Q ss_pred             CceeEEEecCCC-CCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865         19 DECKFAVWTGRA-PISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus        19 D~~kFeiW~~r~-~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      -|+.|.|-.... ..+...|.|.|.|.+.++.||..|++.+.
T Consensus        74 ~p~iF~I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~  115 (117)
T 2rov_A           74 IPRIFQILYANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP  115 (117)
T ss_dssp             GGGEEEEEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred             CCcEEEEEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence            478899974331 12235799999999999999999998753

>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}

Probab=90.66  E-value=0.46  Score=35.40  Aligned_cols=25  Identities=28%  Similarity=0.670  Sum_probs=23.2

Q ss_pred             eEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         36 RILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        36 ~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      +|.|+|.|.+..+.|+..|++++..
T Consensus       105 ~~~l~A~s~~e~~~Wi~al~~~i~~  129 (134)
T 2y7b_A          105 KNWLSADTKEERDLWMQKLNQVLVD  129 (134)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCHHHHHHHHHHHHHHHHH
Confidence            6999999999999999999998864

>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*

Probab=90.15  E-value=0.23  Score=38.08  Aligned_cols=36  Identities=17%  Similarity=0.238  Sum_probs=27.6

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      ...|-|-.+.     +.+++||.|.+.|..|+..|++...+
T Consensus        73 ~n~f~i~~~~-----~s~~~~aes~~eK~~Wl~~~~~a~~~  108 (113)
T 1zc3_B           73 KDMFKLLMFP-----ESRIFQAENAKIKREWLEVLEETKRA  108 (113)
T ss_dssp             SSEEEEEETT-----EEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEeCC-----ceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence            3455555322     35999999999999999999998654

>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A

Probab=89.94  E-value=0.083  Score=36.93  Aligned_cols=27  Identities=4%  Similarity=-0.375  Sum_probs=24.2

Q ss_pred             cchhccccc--ceEEEEecceEEEecCCC
Q psy12865        115 SLEAKQLWV--KRLREVIQETYFSSALPL  141 (227)
Q Consensus       115 ~v~~d~~a~--~elsv~~gqtve~le~~~  141 (227)
                      .++.||.|.  +||++++|+.|.|++...
T Consensus        10 ~Alydy~a~~~~ELs~~~Gd~i~v~~~~~   38 (65)
T 2lj0_A           10 QALYSYIPQNDDELELRDGDIVDVMEKCD   38 (65)
T ss_dssp             EESSCBCCSSTTBCCBCTTCEEEEEEECT
T ss_pred             EEceeECCCCcCCcCCCCCCEEEEeEeCC
Confidence            489999998  899999999999998643

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}

Probab=89.90  E-value=0.092  Score=36.56  Aligned_cols=32  Identities=6%  Similarity=-0.102  Sum_probs=27.5

Q ss_pred             CCccccccchhccccc--ceEEEEecceEEEecC
Q psy12865        108 TDSDKASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       108 ~ds~k~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      +..+....++.||.+.  .||++++|+.|.|++.
T Consensus         4 ~~~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~   37 (72)
T 2jw4_A            4 MAEEVVVVAKFDYVAQQEQELDIKKNERLWLLDD   37 (72)
T ss_dssp             SSCCEEEECSSCCCCSSTTSCCCCTTCEEEEEEC
T ss_pred             CCCCeEEEECcCCCcCCCCcccCCCCCEEEEEEC
Confidence            4455667799999998  8999999999999985

>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}

Probab=89.62  E-value=0.78  Score=37.90  Aligned_cols=54  Identities=19%  Similarity=0.239  Sum_probs=35.7

Q ss_pred             cccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865          5 LMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus         5 lk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      |++..+-+.+... |..-|-|-+... .....|+|+|+|++.|+.|+..|.+-+..
T Consensus       120 i~L~~~~vre~a~-d~~~~fli~~~~-~g~~~yel~a~s~~er~~W~~~I~~Ai~~  173 (185)
T 2lg1_A          120 ISLKKLIVREVAH-EEKGLFLISMGM-TDPEMVEVHASSKEERNSWIQIIQDTINT  173 (185)
T ss_dssp             EESSSCEEECCSS-CSSEEEEECCSS-SCCCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             EeecceEEeccCC-CCCeEEEEEecC-CCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence            4455555666555 444554443221 11346999999999999999999987653

>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A

Probab=89.45  E-value=0.56  Score=36.75  Aligned_cols=37  Identities=22%  Similarity=0.426  Sum_probs=30.6

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      +.+..|.|-...     ..|.|||.|.+..+.|+..|+.++.
T Consensus        75 ~~~~~F~I~t~~-----r~~~l~A~s~~e~~~Wi~ai~~~~~  111 (168)
T 2j59_M           75 KRKNVFRLTTSD-----CECLFQAEDRDDMLAWIKTIQESSN  111 (168)
T ss_dssp             SCSSEEEEECSS-----CEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred             CCCCEEEEEeCC-----ceEEEEcCCHHHHHHHHHHHHHHHh
Confidence            456789998543     3599999999999999999998754

>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=89.40  E-value=0.43  Score=36.81  Aligned_cols=34  Identities=21%  Similarity=0.308  Sum_probs=27.6

Q ss_pred             eeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865         21 CKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus        21 ~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      ..|.|=.+     ..+|.|+|.|.+..+.||+.|+.++.
T Consensus        87 ~~F~i~t~-----~r~y~l~A~s~~e~~~Wi~al~~a~~  120 (126)
T 1v5p_A           87 FCFVINAL-----SQRYFLQANDQKDLKDWVEALNQASK  120 (126)
T ss_dssp             SEEEEECS-----SCEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred             EEEEEECC-----CEEEEEECCCHHHHHHHHHHHHHHHh
Confidence            56877432     34699999999999999999998754

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A

Probab=89.27  E-value=0.14  Score=34.17  Aligned_cols=28  Identities=7%  Similarity=-0.242  Sum_probs=24.7

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  +||++++|+.+.|++..
T Consensus         5 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   34 (61)
T 1y0m_A            5 AVKALFDYKAQREDELTFTKSAIIQNVEKQ   34 (61)
T ss_dssp             CEEESSCBCCCSTTBCCBCTTCEEEEEECC
T ss_pred             EEEECcCCCcCCCCCcCCcCCCEEEEEEec
Confidence            44589999998  89999999999999974

>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}

Probab=89.10  E-value=0.62  Score=36.82  Aligned_cols=39  Identities=15%  Similarity=0.147  Sum_probs=31.0

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      +-.|+|-....   .+.|.|||.|.+....|++.|+......
T Consensus        76 ~~~F~L~~~~~---G~~Y~fqA~s~~~~~~W~~ai~~a~~~~  114 (126)
T 2dtc_A           76 PDIFQLNNPDK---GNVYKFQTGSRFHAILWHKHLDDACKSS  114 (126)
T ss_dssp             TTEEEEECTTS---CSEEEEECSSHHHHHHHHHHHHHHHTSC
T ss_pred             CCEEEEeeCCC---CCEEEEeCCCHHHHHHHHHHHHHHHhcC
Confidence            35799985421   2469999999999999999999987643

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=88.81  E-value=0.16  Score=34.81  Aligned_cols=29  Identities=10%  Similarity=-0.166  Sum_probs=25.4

Q ss_pred             cccccchhccccc--ceEEEEecceEEEecC
Q psy12865        111 DKASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       111 ~k~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      .+...++.||.+.  .||++++|+.|.|++.
T Consensus         7 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~   37 (68)
T 1wxb_A            7 GKYVKILYDFTARNANELSVLKDEVLEVLED   37 (68)
T ss_dssp             CCCEECSSCBCCSSSSBCCBCTTCEEEEEEC
T ss_pred             CEEEEECccCCCCCCCccCCCCCCEEEEEEc
Confidence            3455699999998  8999999999999986

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A

Probab=88.74  E-value=0.14  Score=33.93  Aligned_cols=26  Identities=12%  Similarity=-0.024  Sum_probs=23.2

Q ss_pred             cchhccccc--ceEEEEecceEEEecCC
Q psy12865        115 SLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       115 ~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      .++.||.+.  +||++++||.+.|++..
T Consensus         4 ~al~dy~~~~~~eLs~~~Gd~i~v~~~~   31 (58)
T 1jo8_A            4 TAEYDYDAAEDNELTFVENDKIINIEFV   31 (58)
T ss_dssp             EESSCBCCCSTTBCCBCTTCEEEEEECC
T ss_pred             EECceECCCCCCCcccCCCCEEEEEEec
Confidence            378999998  89999999999999963

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A

Probab=88.71  E-value=0.14  Score=33.82  Aligned_cols=26  Identities=8%  Similarity=-0.309  Sum_probs=23.3

Q ss_pred             cchhccccc--ceEEEEecceEEEecCC
Q psy12865        115 SLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       115 ~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      .++.||.+.  +||++++||.++|++..
T Consensus         5 ~al~dy~~~~~~eLs~~~Gd~i~v~~~~   32 (58)
T 1uti_A            5 RALYDFEALEEDELGFRSGEVVEVLDSS   32 (58)
T ss_dssp             EESSCBCCCSTTBCCBCTTCEEEEEECC
T ss_pred             EECccCCCCCcCCCCCCCCCEEEEEEEC
Confidence            478999998  89999999999999963

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A

Probab=88.66  E-value=0.14  Score=33.70  Aligned_cols=27  Identities=7%  Similarity=-0.252  Sum_probs=24.0

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  .||++++||.|+|++..
T Consensus         6 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   34 (58)
T 2drm_A            6 VKALYDYDAQTGDELTFKEGDTIIVHQKD   34 (58)
T ss_dssp             EEESSCBCCCSTTBCCBCTTCEEEEEECC
T ss_pred             EEECccCCCCCcCCcCCCCCCEEEEEEec
Confidence            4488999998  89999999999999974

>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A

Probab=88.64  E-value=0.45  Score=41.23  Aligned_cols=27  Identities=56%  Similarity=0.705  Sum_probs=25.0

Q ss_pred             CccccccchHHHHHHHHHHHHHHHhhh
Q psy12865        146 KSPASASSLEAKQLWVKRLREVIQETY  172 (227)
Q Consensus       146 k~vlKass~e~Kq~WVk~iREViQE~~  172 (227)
                      ..+|.|+|.+.|+.|++.|+++|+|+|
T Consensus       285 ~~~l~a~s~~ek~~W~~~i~~~i~e~~  311 (311)
T 1nty_A          285 KIVLKASSIENKQDWIKHIREVIQERT  311 (311)
T ss_dssp             CEEEECSSHHHHHHHHHHHHHHHHHTC
T ss_pred             eEEEECCCHHHHHHHHHHHHHHHhhhC
Confidence            467899999999999999999999985

>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A

Probab=88.48  E-value=0.49  Score=42.46  Aligned_cols=42  Identities=14%  Similarity=0.301  Sum_probs=32.2

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhhcc
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQETYF   63 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q~l   63 (227)
                      -+.+|+|-+...+   .+|+|||.|.+..+.|+..|+.++..-++
T Consensus       338 r~~~F~i~t~~~~---~~~~l~A~s~~e~~~Wi~ai~~~~~~~~~  379 (385)
T 2q13_A          338 RRYCFQITSFDGK---KSSILQAESKKDHEEWICTINNISKQIYL  379 (385)
T ss_dssp             CSSEEEEECTTSC---BCCCEECSSHHHHHHHHHHHHHHHTTCC-
T ss_pred             CCceEEEEeCCCC---eEEEEEeCCHHHHHHHHHHHHHHHHhhcc
Confidence            3468999865421   35999999999999999999998764433

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}

Probab=88.41  E-value=0.15  Score=33.72  Aligned_cols=25  Identities=12%  Similarity=-0.073  Sum_probs=22.8

Q ss_pred             chhccccc--ceEEEEecceEEEecCC
Q psy12865        116 LEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       116 v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ++.||.+.  +||++++||.+.|++..
T Consensus         6 al~dy~~~~~~eLs~~~Gd~i~v~~~~   32 (58)
T 2bz8_A            6 VEFDYQAQHDDELTISVGEIITNIRKE   32 (58)
T ss_dssp             ESSCBCCCSTTBCCBCTTCEEEEEECC
T ss_pred             ECcccCCCCcCEeeECCCCEEEEEEeC
Confidence            78899998  89999999999999964

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}

Probab=88.25  E-value=0.16  Score=33.66  Aligned_cols=26  Identities=4%  Similarity=-0.243  Sum_probs=23.6

Q ss_pred             ccchhccccc--ceEEEEecceEEEecC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ..++.||.+.  +||++++|+.+.|++.
T Consensus         6 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~   33 (58)
T 1zlm_A            6 FRALYTFEPRTPDELYFEEGDIIYITDM   33 (58)
T ss_dssp             EEESSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred             EEECccCCCCCCCCccCCCCCEEEEEEe
Confidence            3488999998  8999999999999997

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A

Probab=88.19  E-value=0.15  Score=33.48  Aligned_cols=27  Identities=7%  Similarity=-0.261  Sum_probs=23.8

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  +||++++|+.++|++..
T Consensus         4 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   32 (57)
T 1cka_A            4 VRALFDFNGNDEEDLPFKKGDILRIRDKP   32 (57)
T ss_dssp             EEESSCBCCSSTTBCCBCTTCEEEEEECS
T ss_pred             EEECCcCCCCCCCCCCCCCCCEEEEEEec
Confidence            3478999998  89999999999999964

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A

Probab=88.13  E-value=0.16  Score=33.48  Aligned_cols=27  Identities=4%  Similarity=-0.394  Sum_probs=24.0

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  +||++++|+.+.|++..
T Consensus         5 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   33 (58)
T 1sem_A            5 VQALFDFNPQESGELAFKRGDVITLINKD   33 (58)
T ss_dssp             EEESSCBCCSSTTBCCBCTTCEEEEEECS
T ss_pred             EEECcCCCCCCCCCcCCCCCCEEEEEEec
Confidence            4588999998  89999999999999973

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A

Probab=88.12  E-value=0.16  Score=34.06  Aligned_cols=27  Identities=0%  Similarity=-0.327  Sum_probs=24.1

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  .||++++|+.+.|++..
T Consensus         4 ~~alydy~~~~~~eLs~~~Gd~i~v~~~~   32 (65)
T 2oaw_A            4 VLALYDYQEKSPREVTMKKGDILTLLNST   32 (65)
T ss_dssp             EEECSCBCCSSTTBCCBCTTCEEEEEECC
T ss_pred             EEEcccCCccCCCCCCCCCCCEEEEEEcC
Confidence            4588999998  89999999999999964

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}

Probab=88.07  E-value=0.15  Score=33.33  Aligned_cols=26  Identities=0%  Similarity=-0.392  Sum_probs=23.6

Q ss_pred             cchhccccc--ceEEEEecceEEEecCC
Q psy12865        115 SLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       115 ~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      .++.||.+.  +||++++||.+.|++..
T Consensus         4 ~al~dy~~~~~~eLs~~~Gd~i~v~~~~   31 (54)
T 2a28_A            4 EAIYAYEAQGDDEISIDPGDIITVIRGD   31 (54)
T ss_dssp             EBCSCBCCCSTTBCCBCTTCEEEEEECC
T ss_pred             EECccCCcCCCCCccCCCCCEEEEEEec
Confidence            478999998  89999999999999975

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=87.93  E-value=0.24  Score=34.89  Aligned_cols=28  Identities=0%  Similarity=-0.215  Sum_probs=24.6

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  .||++++|+.|.|++..
T Consensus        19 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   48 (79)
T 1x69_A           19 TAVALYDYQAAGDDEISFDPDDIITNIEMI   48 (79)
T ss_dssp             CEEESSCCCCSSSSBCCCCTTCEEEEEEEC
T ss_pred             EEEECccCCCCCCCCcCcCCCCEEEEeEec
Confidence            44599999998  89999999999999864

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A

Probab=87.85  E-value=0.14  Score=33.86  Aligned_cols=27  Identities=4%  Similarity=-0.423  Sum_probs=23.9

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  .||++++||.+.|++..
T Consensus         5 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   33 (58)
T 1zx6_A            5 VEALYQFDPQQDGDLGLKPGDKVQLLEKL   33 (58)
T ss_dssp             EEECSCBCCCSTTBCCBCTTCEEEEEEEC
T ss_pred             EEECceECCCCCCCccCCCCCEEEEEEec
Confidence            4488999998  89999999999999864

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A

Probab=87.84  E-value=0.15  Score=35.56  Aligned_cols=29  Identities=7%  Similarity=-0.175  Sum_probs=25.5

Q ss_pred             cccccchhccccc--ceEEEEecceEEEecC
Q psy12865        111 DKASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       111 ~k~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      +....++.||.|.  +||++++|+.+.|++.
T Consensus         4 ~~~~~Alydy~a~~~~ELsf~~Gd~i~vl~~   34 (67)
T 2b86_A            4 EVIVIAKWDYTAQQDQELDIKKNERLWLLDD   34 (67)
T ss_dssp             CEEEEESSCBCCSSTTSCCBCTTCEEEEEEC
T ss_pred             CeEEEEeeeECCCCCCccccCCCCEEEEEec
Confidence            4456689999998  8999999999999996

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A

Probab=87.81  E-value=0.13  Score=34.33  Aligned_cols=27  Identities=4%  Similarity=-0.202  Sum_probs=24.0

Q ss_pred             cccchhccccc--ceEEEEecceEEEecC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      +..++.||.+.  +||++++|+.|+|++.
T Consensus         3 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~   31 (60)
T 1i07_A            3 YAKSKYDFVARNSSELSVMKDDVLEILDD   31 (60)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEECGG
T ss_pred             EEEECccCCCCCCCcccCCCCCEEEEEEc
Confidence            34588999998  8999999999999986

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=87.76  E-value=0.24  Score=33.80  Aligned_cols=29  Identities=10%  Similarity=-0.126  Sum_probs=25.3

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ....++.||.+.  .||++++||.|.|++..
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   38 (68)
T 1x2p_A            8 EEFVAIADYAATDETQLSFLRGEKILILRQT   38 (68)
T ss_dssp             CEEEESSCCCCSSTTBCCCCTTCEEEEEECC
T ss_pred             CEEEECceECCCCcCCcCCCCCCEEEEEEcC
Confidence            345599999998  89999999999999974

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=87.73  E-value=0.21  Score=34.57  Aligned_cols=28  Identities=4%  Similarity=-0.149  Sum_probs=24.6

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  .||++++|+.|.|++..
T Consensus        11 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   40 (72)
T 2dl8_A           11 EAIAKFDYVGRTARELSFKKGASLLLYQRA   40 (72)
T ss_dssp             EEEESSCBCCSSSSBCCBCTTCEEEEEEEE
T ss_pred             EEEECccCCcCCCCEeccCCCCEEEEEeec
Confidence            44599999998  89999999999999963

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A

Probab=87.72  E-value=0.18  Score=33.23  Aligned_cols=27  Identities=4%  Similarity=-0.395  Sum_probs=23.9

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  .||++++|+.+.|++..
T Consensus         5 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   33 (58)
T 2vwf_A            5 VQALFDFDPQEDGELGFRRGDFIHVMDNS   33 (58)
T ss_dssp             EEESSCBCCCSTTBCCBCTTCEEEEEECC
T ss_pred             EEECceECCCCcCCcCCCCCCEEEEEEcC
Confidence            4588999998  89999999999999963

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A

Probab=87.68  E-value=0.24  Score=34.62  Aligned_cols=28  Identities=7%  Similarity=-0.148  Sum_probs=24.8

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ....++.||.+.  .||++++||.++|++.
T Consensus        11 ~~~~alydy~~~~~~eLsf~~Gd~i~v~~~   40 (76)
T 2ed1_A           11 RRVKTIYDCQADNDDELTFIEGEVIIVTGE   40 (76)
T ss_dssp             EEEEESSCCCCSSSSBCCCCSSCEEEESSC
T ss_pred             eEEEECccCCCCCcCCcCcCCCCEEEEEEe
Confidence            455699999998  8999999999999985

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A

Probab=87.65  E-value=0.18  Score=33.51  Aligned_cols=27  Identities=4%  Similarity=-0.357  Sum_probs=24.1

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  +||++++||.++|++..
T Consensus         6 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   34 (60)
T 1oot_A            6 AVALYSFAGEESGDLPFRKGDVITILKKS   34 (60)
T ss_dssp             EEESSCBCCCSTTBCCBCTTCEEEEEECC
T ss_pred             EEECccCCcCCcCEeeEcCCCEEEEEEeC
Confidence            3488999998  89999999999999975

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1

Probab=87.65  E-value=0.18  Score=33.91  Aligned_cols=26  Identities=12%  Similarity=-0.308  Sum_probs=23.5

Q ss_pred             ccchhccccc--ceEEEEecceEEEecC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ..++.||.+.  +||++++||.++|++.
T Consensus         8 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~   35 (62)
T 1uj0_A            8 VRALYDFEAVEDNELTFKHGELITVLDD   35 (62)
T ss_dssp             EEESSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred             EEECccCCCCCcCCcCCCCCCEEEEEEe
Confidence            4489999998  8999999999999996

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=87.54  E-value=0.16  Score=34.09  Aligned_cols=28  Identities=4%  Similarity=-0.254  Sum_probs=24.5

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  +||++++|+.|.|++..
T Consensus         7 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   36 (62)
T 1k4u_S            7 QVEALFSYEATQPEDLEFQEGDIILVLSKV   36 (62)
T ss_dssp             EEECCSCBCCCSSSBCCBCSSCEEEEEEES
T ss_pred             EEEECCCCCcCCCCCccCCCCCEEEEEEeC
Confidence            34589999998  89999999999999973

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A

Probab=87.46  E-value=0.15  Score=33.74  Aligned_cols=27  Identities=4%  Similarity=-0.113  Sum_probs=23.9

Q ss_pred             cccchhccccc--ceEEEEecceEEEecC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ...++.||.+.  +||++++||.|.|++.
T Consensus         4 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~   32 (60)
T 2v1q_A            4 RGIVQYDFMAESQDELTIKSGDKVYILDD   32 (60)
T ss_dssp             EEEECSCBCCCSTTBCCBCTTCEEEEEES
T ss_pred             EEEEeeeECCCCCCCccCCCCCEEEEEeC
Confidence            34589999998  8999999999999995

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A

Probab=87.40  E-value=0.28  Score=33.37  Aligned_cols=28  Identities=7%  Similarity=-0.092  Sum_probs=24.7

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ....++.||.+.  .||++++|+.|+|++.
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~   37 (68)
T 2dl3_A            8 RPARAKFDFKAQTLKELPLQKGDIVYIYKQ   37 (68)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred             cEEEECccCCCCCcCCccCCCCCEEEEeEe
Confidence            345599999998  8999999999999986

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}

Probab=87.33  E-value=0.18  Score=34.57  Aligned_cols=27  Identities=4%  Similarity=-0.311  Sum_probs=24.4

Q ss_pred             cccchhccccc--ceEEEEecceEEEecC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ...++.||.+.  +||++++||.|.|++.
T Consensus        10 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~   38 (69)
T 2dil_A           10 EYRALYDYTAQNPDELDLSAGDILEVILE   38 (69)
T ss_dssp             EEECCSCBCCSSSSSCCBCTTCEEEEEEC
T ss_pred             EEEECccCCccCcCccCCCCCCEEEEEEC
Confidence            44599999998  8999999999999997

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=87.32  E-value=0.32  Score=34.09  Aligned_cols=28  Identities=4%  Similarity=-0.284  Sum_probs=24.6

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  .||++++||.++|++..
T Consensus        12 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   41 (76)
T 2epd_A           12 EAVACFAYTGRTAQELSFRRGDVLRLHERA   41 (76)
T ss_dssp             EEEESSCEECSSTTBCEECTTCEEEEEEEE
T ss_pred             EEEECcCCCCCCCCccCCCCCCEEEEEEeC
Confidence            34599999997  89999999999999963

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D

Probab=87.29  E-value=0.17  Score=33.57  Aligned_cols=27  Identities=4%  Similarity=-0.308  Sum_probs=23.7

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  +||++++||.++|++..
T Consensus         6 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   34 (60)
T 2x3w_D            6 VRALYDYDGQEQDELSFKAGDELTKLGEE   34 (60)
T ss_dssp             EEECSCBCCSSSSBCCBCTTCEEEECSCC
T ss_pred             EEECcccCccCCCcccCCCCCEEEEEEcc
Confidence            3488999998  89999999999999863

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=87.26  E-value=0.17  Score=33.32  Aligned_cols=27  Identities=4%  Similarity=-0.197  Sum_probs=23.9

Q ss_pred             cchhccccc--ceEEEEecceEEEecCCC
Q psy12865        115 SLEAKQLWV--KRLREVIQETYFSSALPL  141 (227)
Q Consensus       115 ~v~~d~~a~--~elsv~~gqtve~le~~~  141 (227)
                      .++.||.+.  +||++++|+.|+|++...
T Consensus         5 ~alydy~~~~~~eLs~~~Gd~i~v~~~~~   33 (58)
T 1zuu_A            5 KVLYAYVQKDDDEITITPGDKISLVARDT   33 (58)
T ss_dssp             EECSCBCCCSTTBCCBCTTCCEEEEECCS
T ss_pred             EEeeeECCcCCCcccCCCCCEEEEeEcCC
Confidence            478999998  899999999999999653

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=87.15  E-value=0.37  Score=33.93  Aligned_cols=29  Identities=3%  Similarity=-0.328  Sum_probs=25.5

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALPL  141 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~~  141 (227)
                      ...++.||.+.  .||++++||.|+|++...
T Consensus        19 ~~~al~dy~~~~~~eLsf~~Gd~i~v~~~~~   49 (80)
T 2d8h_A           19 EVTALYSFEGQQPGDLNFQAGDRITVISKTD   49 (80)
T ss_dssp             EEECSSCEECSSTTBCEECTTCEEEEEECCS
T ss_pred             EEEECccCCcCCCCeeeEcCCCEEEEeECcC
Confidence            45599999998  899999999999999753

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}

Probab=87.12  E-value=0.23  Score=34.04  Aligned_cols=27  Identities=11%  Similarity=-0.177  Sum_probs=24.4

Q ss_pred             cccchhccccc--ceEEEEecceEEEecC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ...++.||.+.  .||++++||.|.|++.
T Consensus         9 ~~~alydy~~~~~~eLs~~~Gd~i~v~~~   37 (68)
T 1wxt_A            9 KMQVLYEFEARNPRELTVVQGEKLEVLDH   37 (68)
T ss_dssp             EEEESSCBCCCSSSBCCBCTTCEEEEEEC
T ss_pred             EEEECceECCCCcCcCCCCCCCEEEEEEc
Confidence            45599999998  8999999999999997

>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A

Probab=87.10  E-value=0.94  Score=39.30  Aligned_cols=39  Identities=18%  Similarity=0.229  Sum_probs=31.9

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      .+..|.|-+..    ...|.|||.|.+..+.|++.|+.++...
T Consensus        88 k~~~F~I~t~~----~r~y~f~A~s~ee~~~Wi~aI~~a~~~~  126 (263)
T 3a8p_A           88 KEHVFCLSNSC----GDVYLFQATSQTDLENWVTAIHSACASL  126 (263)
T ss_dssp             CSSEEEEECTT----SCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCC----CcEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence            36789998642    2359999999999999999999998754

>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A

Probab=87.09  E-value=0.16  Score=34.16  Aligned_cols=28  Identities=7%  Similarity=-0.287  Sum_probs=24.7

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  +||++++||.+.|++..
T Consensus         8 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   37 (64)
T 2jte_A            8 YCRTLFPYTGTNEDELTFREGEIIHLISKE   37 (64)
T ss_dssp             EEEESSCBCCSSSSBCCBCTTCEEEEEESC
T ss_pred             EEEECccCCccCCCccCCCCCCEEEEEECC
Confidence            34589999998  89999999999999874

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=87.01  E-value=0.19  Score=34.39  Aligned_cols=27  Identities=4%  Similarity=-0.232  Sum_probs=24.2

Q ss_pred             cccchhccccc--ceEEEEecceEEEecC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ...++.||.+.  .||++++||.|+|++.
T Consensus         9 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~   37 (68)
T 1x2k_A            9 VFRALYTFEPRTPDELYFEEGDIIYITDM   37 (68)
T ss_dssp             EEEESSCCCCCSTTBCCCCSSCEEEEEEC
T ss_pred             EEEECceECCCCCCcccCCCCCEEEEEEc
Confidence            44589999998  8999999999999986

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=86.91  E-value=0.19  Score=34.47  Aligned_cols=28  Identities=4%  Similarity=-0.378  Sum_probs=24.6

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  .||++++|+.|+|++..
T Consensus        10 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   39 (71)
T 2dnu_A           10 KYVTVQPYTSQSKDEIGFEKGVTVEVIRKN   39 (71)
T ss_dssp             EEECSSCBCCSSTTBCCBCTTCEEEECCCC
T ss_pred             EEEECCccCCCCCCCCcCCCCCEEEEeECC
Confidence            44599999998  89999999999999864

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}

Probab=86.90  E-value=0.18  Score=33.62  Aligned_cols=27  Identities=4%  Similarity=-0.358  Sum_probs=24.1

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  +||++++||.++|++..
T Consensus         8 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   36 (60)
T 2xmf_A            8 CKALYAYDAQDTDELSFNANDIIDIIKED   36 (60)
T ss_dssp             EEESSCBCCSSTTBCCBCTTCEEEEEEEC
T ss_pred             EEECccCCcCCcCCcCCCCCCEEEEEEec
Confidence            4589999998  89999999999999964

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A

Probab=86.88  E-value=0.18  Score=33.60  Aligned_cols=28  Identities=7%  Similarity=-0.241  Sum_probs=24.5

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  .||++.+|+.+.|++..
T Consensus         7 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   36 (63)
T 3eg3_A            7 LFVALYDFVASGDNTLSITKGEKLRVLGYN   36 (63)
T ss_dssp             EEEESSCBCCCSSSBCCBCTTCEEEEEEEC
T ss_pred             EEEEcceECCCCCCccCCCCCCEEEEEEeC
Confidence            45589999998  89999999999999853

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=86.83  E-value=0.25  Score=33.73  Aligned_cols=29  Identities=3%  Similarity=-0.337  Sum_probs=25.1

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ....++.||.+.  .||++++|+.|+|++..
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   38 (70)
T 2ct3_A            8 TPYRAMYQYRPQNEDELELREGDRVDVMQQC   38 (70)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTEEEEEEEEC
T ss_pred             cEEEECccCCcCCcCCccCCCCCEEEEEEEC
Confidence            345599999998  89999999999999964

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1

Probab=86.83  E-value=0.2  Score=34.13  Aligned_cols=27  Identities=11%  Similarity=-0.124  Sum_probs=24.1

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  +||++++|+.|.|++..
T Consensus         5 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   33 (67)
T 1gl5_A            5 VVAMYDFQATEAHDLRLERGQEYIILEKN   33 (67)
T ss_dssp             EEECSCBCCSSSSBCCBCTTCEEEEEECS
T ss_pred             EEECccCCCCCCCeecCCcCCEEEEEEcc
Confidence            4588999998  89999999999999973

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A

Probab=86.63  E-value=0.19  Score=33.38  Aligned_cols=28  Identities=4%  Similarity=-0.113  Sum_probs=24.3

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  .||++++||.++|++..
T Consensus         6 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   35 (59)
T 2g6f_X            6 VVRAKFNFQQTNEDELSFSKGDVIHVTRVE   35 (59)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEEEC
T ss_pred             EEEECceeCCCCcCCcCCCCCCEEEEEEec
Confidence            34589999997  89999999999999863

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}

Probab=86.61  E-value=0.2  Score=34.09  Aligned_cols=27  Identities=7%  Similarity=-0.263  Sum_probs=24.0

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  .||++++|+.|.|++..
T Consensus        13 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   41 (68)
T 1s1n_A           13 YIAVGDFTAQQVGDLTFKKGEILLVIEKK   41 (68)
T ss_dssp             EEECSCBCCSSSSCCCBCSSEEEEECSCC
T ss_pred             EEEcccCCCCCCCcCCCCCCCEEEEEEcC
Confidence            3489999998  89999999999999974

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}

Probab=86.60  E-value=0.21  Score=34.17  Aligned_cols=29  Identities=7%  Similarity=-0.075  Sum_probs=25.1

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      +...++.||.+.  +||++++||.|.|++..
T Consensus         7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   37 (71)
T 2jt4_A            7 KRGIVQYDFMAESQDELTIKSGDKVYILDDK   37 (71)
T ss_dssp             EEEEECSCBCCSSTTBCCBCTTCEEEEEESS
T ss_pred             CEEEEcccCCCCCCCcccCCCCCEEEEEECC
Confidence            345599999998  89999999999999953

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A

Probab=86.59  E-value=0.22  Score=33.47  Aligned_cols=29  Identities=3%  Similarity=-0.133  Sum_probs=25.0

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ....++.||.+.  .||++++|+.++|++..
T Consensus         7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   37 (64)
T 2ak5_A            7 LVVRAKFNFQQTNEDELSFSKGDVIHVTRVE   37 (64)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEECC
T ss_pred             EEEEEccccCCcCcCcccCCCCCEEEEeEec
Confidence            345589999998  89999999999999864

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A

Probab=86.56  E-value=0.19  Score=33.80  Aligned_cols=25  Identities=16%  Similarity=-0.069  Sum_probs=22.9

Q ss_pred             cchhccccc--ceEEEEecceEEEecC
Q psy12865        115 SLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       115 ~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      .++.||.+.  +||++++|+.+.|++.
T Consensus         5 ~al~dy~~~~~~eLs~~~Gd~i~v~~~   31 (62)
T 2j6f_A            5 IVEYDYDAVHDDELTIRVGEIIRNVKK   31 (62)
T ss_dssp             EECSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred             EECccCCcCCcCCcCCcCCCEEEEEEe
Confidence            378999998  8999999999999997

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A

Probab=86.52  E-value=0.19  Score=32.96  Aligned_cols=26  Identities=4%  Similarity=-0.220  Sum_probs=22.8

Q ss_pred             cchhcc-ccc--ceEEEEecceEEEecCC
Q psy12865        115 SLEAKQ-LWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       115 ~v~~d~-~a~--~elsv~~gqtve~le~~  140 (227)
                      .++.|| .+.  .||++++|+.|+|++..
T Consensus         4 ~al~d~~~~~~~~eLs~~~Gd~i~v~~~~   32 (58)
T 1zuy_A            4 EAAYDFPGSGSPSELPLKKGDVIYITREE   32 (58)
T ss_dssp             EESSCBCCCSCTTBCCBCTTCEEEEEEEC
T ss_pred             EEecccCCCCCCCcCCCCCCCEEEEEEec
Confidence            478899 676  89999999999999974

>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=86.51  E-value=0.16  Score=34.88  Aligned_cols=29  Identities=3%  Similarity=-0.301  Sum_probs=25.5

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ....++.||.+.  .||++++|+.|.|++..
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   38 (70)
T 2da9_A            8 DYCKVIFPYEAQNDDELTIKEGDIVTLINKD   38 (70)
T ss_dssp             EEEEECSCCCCSSTTBCCCCTTEEEEEEECC
T ss_pred             cEEEECcCCCCCCcCEeeEcCCCEEEEEECC
Confidence            345699999998  89999999999999975

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=86.48  E-value=0.2  Score=34.29  Aligned_cols=27  Identities=7%  Similarity=-0.291  Sum_probs=24.0

Q ss_pred             cccchhccccc--ceEEEEecceEEEecC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ...++.||.+.  .||++++|+.++|++.
T Consensus         9 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~   37 (68)
T 2dl4_A            9 TYVALYKFVPQENEDLEMRPGDIITLLED   37 (68)
T ss_dssp             EEEESSCCCCSSTTBCCCCTTCEEEEEEC
T ss_pred             EEEEeeeECCCCcCCcCCCCCCEEEEEEe
Confidence            34589999997  8999999999999995

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A

Probab=86.43  E-value=0.18  Score=33.76  Aligned_cols=27  Identities=7%  Similarity=-0.386  Sum_probs=24.4

Q ss_pred             cccchhccccc--ceEEEEecceEEEecC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ...++.||.+.  +||++++||.++|++.
T Consensus         8 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~   36 (62)
T 2iim_A            8 LVIALHSYEPSHDGDLGFEKGEQLRILEQ   36 (62)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred             EEEEcccCCCCCCCCcCCCCCCEEEEEEc
Confidence            45589999998  8999999999999997

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}

Probab=86.34  E-value=0.23  Score=33.95  Aligned_cols=27  Identities=4%  Similarity=-0.213  Sum_probs=24.1

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  +||++++||.+.|++..
T Consensus         6 ~~alydy~~~~~~eLs~~~Gd~i~v~~~~   34 (69)
T 1wyx_A            6 AKALYDNVAESPDELSFRKGDIMTVLEQD   34 (69)
T ss_dssp             EEESSCBCCSSTTBCCBCTTCEEEEEETT
T ss_pred             EEECccCCcCCCCccCCcCCCEEEEeECC
Confidence            3488999998  89999999999999975

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A

Probab=86.32  E-value=0.2  Score=33.45  Aligned_cols=27  Identities=7%  Similarity=-0.223  Sum_probs=24.0

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  +||++++|+.+.|++..
T Consensus         7 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   35 (60)
T 1w70_A            7 AEALFDFTGNSKLELNFKAGDVIFLLSRI   35 (60)
T ss_dssp             EEESSCBCCSSTTBCCBCTTCEEEEEEEC
T ss_pred             EEECccCCcCCCCCccCCCCCEEEEEEeC
Confidence            3488999997  89999999999999974

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=86.28  E-value=0.25  Score=34.65  Aligned_cols=28  Identities=4%  Similarity=-0.438  Sum_probs=24.8

Q ss_pred             cccchhccccc-ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV-KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~-~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+. .||++++||.|+|++..
T Consensus        12 ~~~alydy~~~~~eLs~~~Gd~i~vl~~~   40 (75)
T 2egc_A           12 VYVSIADYEGDEETAGFQEGVSMEVLERN   40 (75)
T ss_dssp             EEEECSCBCCCSSSCCBCTTCEEEECEEC
T ss_pred             EEEECCCcCCCCCcCCCCCCCEEEEEEcC
Confidence            45599999998 89999999999999965

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}

Probab=86.08  E-value=0.21  Score=34.06  Aligned_cols=27  Identities=4%  Similarity=-0.196  Sum_probs=24.1

Q ss_pred             cccchhccccc--ceEEEEecceEEEecC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ...++.||.+.  +||++++|+.|+|++.
T Consensus         9 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~   37 (68)
T 2djq_A            9 RAKALCNYRGKNPGDLKFNKGDVILLRRQ   37 (68)
T ss_dssp             EEEECSCCCSCCTTCCCCCTTCEEEEEEC
T ss_pred             EEEECCCCCCCCcCCccCCCCCEEEEEEe
Confidence            44589999998  8999999999999986

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=86.07  E-value=0.24  Score=34.75  Aligned_cols=28  Identities=4%  Similarity=-0.258  Sum_probs=24.6

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  .||++++|+.|+|++..
T Consensus         9 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   38 (78)
T 2yuo_A            9 RAKALLDFERHDDDELGFRKNDIITIISQK   38 (78)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEECC
T ss_pred             EEEECccCCCCCCCCccCCCCCEEEEEEec
Confidence            44589999998  89999999999999863

>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*

Probab=86.03  E-value=0.21  Score=33.49  Aligned_cols=27  Identities=4%  Similarity=-0.066  Sum_probs=23.7

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  +||++++||.++|++..
T Consensus         6 ~~al~~y~~~~~~eLs~~~Gd~i~v~~~~   34 (62)
T 2fpe_A            6 HRAIFRFVPRHEDELELEVDDPLLVELQA   34 (62)
T ss_dssp             EEECSCBCCSSTTBCCBCTTCEEEEEEEC
T ss_pred             EEECccCCccCcCcCcCCCCCEEEEEEec
Confidence            4589999998  89999999999999753

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=86.02  E-value=0.21  Score=34.68  Aligned_cols=29  Identities=3%  Similarity=-0.299  Sum_probs=25.4

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ....++.||.+.  .||++++||.|.|++..
T Consensus         8 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~   38 (77)
T 2d8j_A            8 QYFVALFDYQARTAEDLSFRAGDKLQVLDTS   38 (77)
T ss_dssp             EEEEESSCBCCSSSSBCCBCTTCCEEEEECC
T ss_pred             CEEEEccCCCCCCCCccCCCCCCEEEEEECC
Confidence            345699999998  89999999999999974

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}

Probab=85.96  E-value=0.19  Score=33.53  Aligned_cols=28  Identities=4%  Similarity=-0.184  Sum_probs=24.4

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  +||++++||.+.|++..
T Consensus         8 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   37 (60)
T 2gnc_A            8 FAIAKFDYVGRSARELSFKKGASLLLYHRA   37 (60)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEEEE
T ss_pred             EEEECCCCCcCCcCCcCCCCCCEEEEEEec
Confidence            34589999998  89999999999999863

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=85.91  E-value=0.19  Score=35.37  Aligned_cols=28  Identities=4%  Similarity=-0.081  Sum_probs=24.8

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      +..++.||.+.  .||++++||.|+|++..
T Consensus         9 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   38 (80)
T 1ue9_A            9 IAQVTSAYVASGSEQLSLAPGQLILILKKN   38 (80)
T ss_dssp             EEEECSCCCCCSTTBCCCCTTCEEEEEEEC
T ss_pred             EEEECcccCCCCCCCCCCCCCCEEEEEEec
Confidence            45589999997  89999999999999974

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}

Probab=85.91  E-value=0.19  Score=33.10  Aligned_cols=26  Identities=15%  Similarity=-0.157  Sum_probs=23.2

Q ss_pred             cchhccccc--ceEEEEecceEEEecCC
Q psy12865        115 SLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       115 ~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      .++.||.+.  +||++++|+.|.|++..
T Consensus         5 ~al~d~~~~~~~eLs~~~Gd~i~v~~~~   32 (59)
T 1yn8_A            5 VALYDFEPENDNELRLAEGDIVFISYKH   32 (59)
T ss_dssp             EECSCBCCCSTTBCCBCTTCEEEEEEEE
T ss_pred             EECccCCCCCCCCcCCCCCCEEEEEEcC
Confidence            488999998  89999999999999863

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=85.70  E-value=0.27  Score=33.61  Aligned_cols=29  Identities=3%  Similarity=-0.212  Sum_probs=25.1

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ....++.||.+.  .||++++|+.|+|++..
T Consensus         8 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~   38 (69)
T 2eqi_A            8 RTVKALYDYKAKRSDELTFCRGALIHNVSKE   38 (69)
T ss_dssp             CEEEESSCBCCCSSSCCCBCTTCEEESCCCC
T ss_pred             cEEEECeeECCCCcCccCCCCCCEEEEEEcC
Confidence            345699999998  89999999999999863

>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A

Probab=85.65  E-value=0.22  Score=32.55  Aligned_cols=25  Identities=8%  Similarity=-0.156  Sum_probs=22.8

Q ss_pred             chhccccc--ceEEEEecceEEEecCC
Q psy12865        116 LEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       116 v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ++.||.+.  .||++.+|+.+.|++..
T Consensus         6 al~dy~~~~~~eLs~~~Gd~i~v~~~~   32 (58)
T 4e6r_A            6 VXFAYVAEREDELSLVXGSRVTVMEXC   32 (58)
T ss_dssp             ECSCBCCCSTTBCCBCTTCEEEEEEEC
T ss_pred             ECccCCCCCCCEeeEeCCCEEEEeEcC
Confidence            78899998  89999999999999875

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=85.63  E-value=0.14  Score=35.11  Aligned_cols=27  Identities=7%  Similarity=-0.237  Sum_probs=24.1

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  .||++++|+.|+|++..
T Consensus        11 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   39 (70)
T 2ega_A           11 YVVVSNYKKQENSELSLQAGEVVDVIEKN   39 (70)
T ss_dssp             EECCSCCCCCSSSSCCCCTTCBCEEEEEC
T ss_pred             EEECceECCCCCCcccCCCCCEEEEEEcc
Confidence            4489999998  89999999999999964

>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A

Probab=85.60  E-value=0.27  Score=34.20  Aligned_cols=27  Identities=4%  Similarity=-0.303  Sum_probs=24.2

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  +||++++||.|+|++..
T Consensus         5 ~~Alydy~a~~~~eLs~~~Gd~i~vl~~~   33 (69)
T 2ydl_A            5 CKVIFPYEAQNDDELTIKEGDIVTLINKD   33 (69)
T ss_dssp             EEESSCBCCCSTTBCCBCTTCEEEEEESC
T ss_pred             EEEcccCCCCCCCccccCCCCEEEEEEcC
Confidence            3488999998  89999999999999975

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...

Probab=85.53  E-value=0.27  Score=32.59  Aligned_cols=28  Identities=4%  Similarity=-0.267  Sum_probs=24.6

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  .||++.+|+.+.|++..
T Consensus         8 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   37 (62)
T 3ngp_A            8 LVLVLYDYQEKSPRELTVKKGDILTLLNST   37 (62)
T ss_dssp             EEEECSCBCCCSTTBCCBCTTCEEEEEECC
T ss_pred             EEEECcCCCCCCCCCccCCCCCEEEEeEec
Confidence            34589999998  89999999999999964

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=85.50  E-value=0.21  Score=34.27  Aligned_cols=28  Identities=4%  Similarity=-0.331  Sum_probs=24.6

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  .||++++|+.|.|++..
T Consensus         9 ~~~alydy~~~~~~eLs~~~Gd~i~vl~~~   38 (70)
T 2ct4_A            9 HCVAIYHFEGSSEGTISMAEGEDLSLMEED   38 (70)
T ss_dssp             EEEESSCBCCCSTTCCCBCTTCEEEEEECC
T ss_pred             EEEEcccCCCCCCCcCCCCCCCEEEEEecc
Confidence            34589999998  89999999999999863

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A

Probab=85.48  E-value=0.23  Score=34.04  Aligned_cols=27  Identities=19%  Similarity=-0.128  Sum_probs=24.2

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  +||++++|+.+.|++..
T Consensus         9 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   37 (71)
T 1u5s_A            9 VQTLYPFSSVTEEELNFEKGETMEVIEKP   37 (71)
T ss_dssp             EEESSCCCCCSSSBCCCCSSCCEEEEECC
T ss_pred             EEEcccCCCCCCCcccCCCCCEEEEEECC
Confidence            4489999998  89999999999999974

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A

Probab=85.40  E-value=0.27  Score=33.04  Aligned_cols=29  Identities=0%  Similarity=-0.304  Sum_probs=25.4

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ....++.||.+.  .||++++|+.+.|++..
T Consensus        22 ~~~~alydy~a~~~~eLsf~~Gd~i~v~~~~   52 (62)
T 1g2b_A           22 ELVLALYDYQEKSPREVTMKKGDILTLLNST   52 (62)
T ss_dssp             CEEEECSCBCCSSTTBCCBCTTCEEEEEECC
T ss_pred             eEEEEeeeECCCCCCccCCCCCCEEEEEEec
Confidence            345699999998  89999999999999973

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=85.39  E-value=0.28  Score=34.44  Aligned_cols=29  Identities=3%  Similarity=-0.221  Sum_probs=25.3

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ....++.||.+.  .||++++|+.|+|++..
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   38 (79)
T 2yun_A            8 RLCKALYSFQARQDDELNLEKGDIVIIHEKK   38 (79)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEEECC
T ss_pred             CEEEECccCCcCCCCCcCCCCCCEEEEEEcC
Confidence            455699999998  89999999999999863

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*

Probab=85.38  E-value=0.27  Score=33.83  Aligned_cols=29  Identities=7%  Similarity=-0.230  Sum_probs=25.2

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ....++.||.+.  .||++.+|+.|.|++..
T Consensus        16 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   46 (73)
T 3h0h_A           16 TLFVALYDYEAITEDDLSFHKGEKFQILNSS   46 (73)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEECS
T ss_pred             EEEEECccCCCCCCCcceEeCCCEEEEEEec
Confidence            345599999998  89999999999999864

>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=85.37  E-value=1.5  Score=34.89  Aligned_cols=38  Identities=13%  Similarity=0.322  Sum_probs=28.9

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      +....|+|=...     .+|+|+|.|.+....||+.|.+.+..
T Consensus        74 ~~k~~F~~v~~~-----~ty~~~Adseee~~~WikAi~~A~~~  111 (126)
T 1wi1_A           74 GGRAFFNAVKEG-----DTVIFASDDEQDRILWVQAMYRATGQ  111 (126)
T ss_dssp             SCSSEEEEECSS-----CEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred             cCceEEEEecCC-----ceEEEEcCCHHHHHHHHHHHHHHhcc
Confidence            344567654321     36999999999999999999998763

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A

Probab=85.36  E-value=0.27  Score=32.93  Aligned_cols=27  Identities=0%  Similarity=-0.240  Sum_probs=24.2

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  .||++.+|+.+.|++..
T Consensus        12 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   40 (65)
T 3ulr_B           12 AIALYDYQAAGDDEISFDPDDIITNIEMI   40 (65)
T ss_dssp             EEECSCBCCCSTTBCCBCTTCEEEEEECC
T ss_pred             EEEEeeECCCCcCEeeEecCCEEEEEEec
Confidence            4489999998  89999999999999875

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=85.35  E-value=0.24  Score=34.89  Aligned_cols=28  Identities=4%  Similarity=-0.285  Sum_probs=24.8

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  +||++++||.|+|++..
T Consensus        19 ~~~al~dy~~~~~~eLsf~~Gd~i~v~~~~   48 (78)
T 2ed0_A           19 KVVAIYDYTKDKEDELSFQEGAIIYVIKKN   48 (78)
T ss_dssp             EEEECSCBCCSSTTBCCBCSSCEEEEEEEC
T ss_pred             EEEECccCCccCcCcccccCCCEEEEEEeC
Confidence            34599999998  89999999999999964

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A

Probab=85.33  E-value=0.22  Score=34.18  Aligned_cols=28  Identities=7%  Similarity=-0.281  Sum_probs=25.0

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      +...++.||.+.  .||++++||.|.|++.
T Consensus         9 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~   38 (68)
T 2k2m_A            9 KWVLCNYDFQARNSSELSVKQRDVLEVLDD   38 (68)
T ss_dssp             CEEEESSCBCCCSSSBCCBCTTCEEEEEEC
T ss_pred             EEEEECccCCCCCCCcccCCCCCEEEEEEc
Confidence            455699999998  8999999999999996

>1wfw_A Kalirin-9A; SH3 domain, neuron-specific GDP/GTP exchange factor, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.34.2.1

Probab=85.30  E-value=0.22  Score=36.66  Aligned_cols=30  Identities=7%  Similarity=-0.110  Sum_probs=26.3

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCCCCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALPLAA  143 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~~~~  143 (227)
                      ..|.+||+|.  +|++|..|+.|+|+..++..
T Consensus        10 m~V~~dY~A~ke~eI~v~~ge~Vqila~nqqn   41 (74)
T 1wfw_A           10 MTVIKDYYALKENEICVSQGEVVQVLAVNQQN   41 (74)
T ss_dssp             EECCSCBCCCSSSCCCBCTTCEEEEEEECTTS
T ss_pred             EEEEeeeeeeccceeccccCcEEEEEEecCcc
Confidence            3489999999  99999999999999987654

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A

Probab=85.27  E-value=0.2  Score=34.04  Aligned_cols=28  Identities=11%  Similarity=-0.012  Sum_probs=24.6

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  .||++++|+.|+|++..
T Consensus        10 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   39 (67)
T 1aww_A           10 KVVALYDYMPMNANDLQLRKGDEYFILEES   39 (67)
T ss_dssp             EEEBSSCCCCSSSSSCCCCSSCEEECCCCC
T ss_pred             EEEECccCCCCCCCCccCCCCCEEEEEEcc
Confidence            44599999998  89999999999999863

>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}

Probab=85.24  E-value=0.28  Score=33.85  Aligned_cols=29  Identities=3%  Similarity=-0.301  Sum_probs=25.5

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ....++.||.+.  +||++++|+.|.|++..
T Consensus        10 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   40 (73)
T 2k9g_A           10 DYCKVIFPYEAQNDDELTIKEGDIVTLINKD   40 (73)
T ss_dssp             EEEEECSCBCCSSTTBCCBCTTCEEEEEECC
T ss_pred             cEEEECccCCCCCCCeeeECCCCEEEEEECC
Confidence            345599999998  89999999999999975

>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=85.23  E-value=0.34  Score=33.54  Aligned_cols=27  Identities=4%  Similarity=-0.421  Sum_probs=24.3

Q ss_pred             cccchhccccc--ceEEEEecceEEEecC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ...++.||.+.  .||++++|+.++|++.
T Consensus        10 ~~~alydy~~~~~~eLsf~~Gd~i~v~~~   38 (73)
T 2dl7_A           10 FVKALYDYEGQTDDELSFPEGAIIRILNK   38 (73)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEEC
T ss_pred             EEEECccCCcCCCCcCCCCCCCEEEEEEC
Confidence            44599999997  8999999999999996

>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=85.10  E-value=0.21  Score=34.64  Aligned_cols=28  Identities=4%  Similarity=-0.202  Sum_probs=24.5

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ....++.||.+.  .||++++|+.++||+.
T Consensus        11 ~~~~alydy~~~~~~eLsf~~Gd~i~v~~~   40 (72)
T 1ugv_A           11 RKAKALYACKAEHDSELSFTAGTVFDNVHP   40 (72)
T ss_dssp             CCEEESSCBCCCSSSBCCBCTTCEEBSCCB
T ss_pred             cEEEEccccCCcCCCEeCCcCCCEEEEEEe
Confidence            355699999998  8999999999999974

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1

Probab=85.07  E-value=0.28  Score=33.56  Aligned_cols=27  Identities=7%  Similarity=-0.261  Sum_probs=24.0

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  +||++++||.++|++..
T Consensus         6 ~~Alydy~~~~~~eLsf~~Gd~i~v~~~~   34 (65)
T 1b07_A            6 VRALFDFNGNDEEDLPFKKGDILRIRDKP   34 (65)
T ss_dssp             EEESSCBCCSSTTBCCBCTTCEEEEEECS
T ss_pred             EEECCcCCCCCCCccCCcCCCEEEEEEec
Confidence            4488999998  89999999999999964

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=84.89  E-value=0.24  Score=34.89  Aligned_cols=28  Identities=7%  Similarity=-0.234  Sum_probs=25.0

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  .||++++|+.|+|++..
T Consensus        15 ~~~alydy~~~~~~eLs~~~Gd~i~v~~~~   44 (78)
T 2dl5_A           15 TCKVVYSYKASQPDELTIEEHEVLEVIEDG   44 (78)
T ss_dssp             EEEECSCBCCCSTTBCCBCSSEEEEEEECC
T ss_pred             EEEEceeECCCCCCCCCCCCCCEEEEEecc
Confidence            44599999998  89999999999999974

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=84.83  E-value=0.38  Score=33.44  Aligned_cols=27  Identities=4%  Similarity=-0.212  Sum_probs=24.4

Q ss_pred             cccchhccccc--ceEEEEecceEEEecC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ...++.||.+.  .||++++|+.++|++.
T Consensus        12 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~   40 (74)
T 1j3t_A           12 KAQALCSWTAKKDNHLNFSKHDIITVLEQ   40 (74)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEEE
T ss_pred             EEEECCCCCCCCCCccCCCCCCEEEEEec
Confidence            45599999997  8999999999999996

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=84.72  E-value=0.3  Score=34.91  Aligned_cols=29  Identities=10%  Similarity=-0.160  Sum_probs=25.8

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ++..++.||.+.  .||++++||.|.|++..
T Consensus        20 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~   50 (85)
T 2yuq_A           20 TVVIALYDYQTNDPQELALRRNEEYCLLDSS   50 (85)
T ss_dssp             CEEEESSCCCCSCSSBCCCCBTEEEEEEECC
T ss_pred             eEEEECcCCCCCCCCcCCCCCCCEEEEEEec
Confidence            456699999998  89999999999999964

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=84.71  E-value=0.24  Score=35.16  Aligned_cols=28  Identities=4%  Similarity=-0.290  Sum_probs=24.8

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  .||++++|+.|+|++..
T Consensus        10 ~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~   39 (80)
T 2ekh_A           10 SYMTCSAYQKVQDSEISFPAGVEVQVLEKQ   39 (80)
T ss_dssp             EEEECSCBCCSSTTSCCBCTTCEEEEEEEC
T ss_pred             EEEECCCCCCCCCCccCcCCCCEEEEEEeC
Confidence            45599999998  89999999999999864

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=84.67  E-value=0.24  Score=34.61  Aligned_cols=28  Identities=4%  Similarity=-0.045  Sum_probs=24.7

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  +||++++|+.|+|++..
T Consensus        12 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   41 (76)
T 1ujy_A           12 IVKARFNFKQTNEDELSVCKGDIIYVTRVE   41 (76)
T ss_dssp             EEECCSCBCCSSTTSCCBCSSCCEEESSCC
T ss_pred             EEEECccCCcCCCCcccCCCCCEEEEEEec
Confidence            45599999998  89999999999999863

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}

Probab=84.66  E-value=0.26  Score=34.20  Aligned_cols=28  Identities=4%  Similarity=-0.360  Sum_probs=24.7

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  +||++++||.++|++..
T Consensus        15 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   44 (73)
T 3c0c_A           15 SCKALYDFEPENDGELGFREGDLITLTNQI   44 (73)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEEEC
T ss_pred             EEEECccCCCCCCCCccCcCCCEEEEEEec
Confidence            44599999998  89999999999999963

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A

Probab=84.60  E-value=0.27  Score=33.63  Aligned_cols=27  Identities=11%  Similarity=-0.215  Sum_probs=23.3

Q ss_pred             ccchhccc-cc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQL-WV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~-a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||. +.  .||++++|+.|.|++..
T Consensus         5 ~~alydy~~~~~~~eLs~~~Gd~i~v~~~~   34 (69)
T 1ruw_A            5 FEAAYDFPGSGSSSELPLKKGDIVFISRDE   34 (69)
T ss_dssp             EEESSCBCCCSCTTBCCBCTTCEEEEEEEC
T ss_pred             EEEccccCCCCCCCcccCCCCCEEEEEEec
Confidence            34889996 76  89999999999999864

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1

Probab=84.60  E-value=0.31  Score=33.45  Aligned_cols=26  Identities=8%  Similarity=-0.179  Sum_probs=23.6

Q ss_pred             cccchhccccc--ceEEEEecceEEEec
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSA  138 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le  138 (227)
                      ...++.||.+.  +||++++|+.++|++
T Consensus        13 ~~~alydy~~~~~~eLs~~~Gd~i~v~~   40 (71)
T 1csk_A           13 ECIAKYNFHGTAEQDLPFCKGDVLTIVA   40 (71)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEE
T ss_pred             EEEEceeECcCCCCcCCCCCCCEEEEeE
Confidence            34589999998  899999999999999

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=84.57  E-value=0.45  Score=34.22  Aligned_cols=27  Identities=11%  Similarity=-0.253  Sum_probs=24.3

Q ss_pred             cccchhccccc--ceEEEEecceEEEecC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ...++.||.+.  +||++++||.++|++.
T Consensus        19 ~~~Alydy~~~~~~eLsf~~Gd~i~v~~~   47 (88)
T 1x2q_A           19 KVRALYDFEAVEDNELTFKHGEIIIVLDD   47 (88)
T ss_dssp             EEEESSCCCCCSSSCCCCCSSCEEEEEEC
T ss_pred             EEEEcccCCCCCcCccCCCCCCEEEEEEe
Confidence            45599999998  8999999999999995

>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=84.56  E-value=0.2  Score=34.76  Aligned_cols=30  Identities=3%  Similarity=-0.296  Sum_probs=25.8

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALPL  141 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~~  141 (227)
                      ....++.||.+.  +||++++||.+.|++...
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~   39 (73)
T 2dm1_A            8 GTAVARYNFAARDMRELSLREGDVVRIYSRIG   39 (73)
T ss_dssp             SEEEESSCBCCCSTTBCCBCTTCEEECCBSSS
T ss_pred             CEEEECccCCcCCCCcCCCCCCCEEEEEEecC
Confidence            345599999998  899999999999999754

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}

Probab=84.46  E-value=0.25  Score=35.04  Aligned_cols=28  Identities=4%  Similarity=-0.306  Sum_probs=24.9

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  +||++++|+.++|++..
T Consensus        12 ~~~alydy~~~~~~eLsf~~Gd~i~v~~~~   41 (80)
T 2i0n_A           12 YARALKDYNVSDTSLLPFKRNDIITITFKD   41 (80)
T ss_dssp             EEEESSCBCCCSSSSCCBCSSEEEEEEEES
T ss_pred             EEEECCCCCcCCCCCcCCCCCCEEEEEEec
Confidence            44589999998  89999999999999974

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}

Probab=84.45  E-value=0.32  Score=33.35  Aligned_cols=26  Identities=12%  Similarity=-0.050  Sum_probs=23.3

Q ss_pred             ccchhccccc--ceEEEEecceEEEecC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ..++.||.+.  +||++++||.|.|++.
T Consensus         4 ~~alydy~~~~~~eLs~~~Gd~i~v~~~   31 (65)
T 2nwm_A            4 ARLKFDFQAQSPKELTLQKGDIVYIHKE   31 (65)
T ss_dssp             EEECSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred             EEEeeeECCCCcCccCCcCCCEEEEEEe
Confidence            3478999998  8999999999999986

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1

Probab=84.44  E-value=0.32  Score=33.44  Aligned_cols=28  Identities=0%  Similarity=-0.330  Sum_probs=24.7

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  .||++.+|+.|.|++..
T Consensus         7 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   36 (73)
T 3thk_A            7 LVLALYDYQEKSPREVTMKKGDILTLLNST   36 (73)
T ss_dssp             EEEECSCBCCCSTTBCCBCTTCEEEEEECC
T ss_pred             EEEECcCCCcCCCCccCCCCCCEEEEEECC
Confidence            44589999998  89999999999999964

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A

Probab=84.40  E-value=0.25  Score=34.50  Aligned_cols=27  Identities=4%  Similarity=-0.279  Sum_probs=24.3

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  .||++++||.|+|++..
T Consensus        12 ~~alydy~~~~~~eLs~~~Gd~i~v~~~~   40 (74)
T 1gbq_A           12 AIAKYDFKATADDELSFKRGDILKVLNEE   40 (74)
T ss_dssp             EEESSCBCCSSTTBCCBCTTCEEECCBCS
T ss_pred             EEECccCCCCCCCeeeEcCCCEEEEeEec
Confidence            4589999998  89999999999999864

>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1

Probab=84.40  E-value=2.2  Score=34.90  Aligned_cols=39  Identities=31%  Similarity=0.384  Sum_probs=30.4

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      +-.|.|=....  +...|.|-|.|.|....|++.|+++.|.
T Consensus       111 ~~vF~I~~~~~--~~~~~~laAds~Eem~dW~kaIreaa~~  149 (150)
T 2fjl_A          111 LFVFSISMPSV--AQWSLDVAADSQEELQDWVKKIREVAQT  149 (150)
T ss_dssp             SCEEEEECTTT--SSCCEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred             ceEEEEeCCCC--CCceEEEEeCCHHHHHHHHHHHHHHHhh
Confidence            34566655432  3567999999999999999999999763

>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}

Probab=84.29  E-value=0.32  Score=35.34  Aligned_cols=30  Identities=7%  Similarity=-0.129  Sum_probs=26.2

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALPL  141 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~~  141 (227)
                      ....++.||.+.  .||++++||.|.|++...
T Consensus        18 ~~~~alydy~a~~~~eLsf~~Gd~i~v~~~~~   49 (93)
T 1wxu_A           18 VVARAEYDFVAVSDEEISFRAGDMLNLALKEQ   49 (93)
T ss_dssp             BCEEESSCBCCSSSSBCCBCSSCBCEECCTTT
T ss_pred             EEEEECccCCCCCCCccCcCCCCEEEEEECCC
Confidence            455699999998  899999999999999754

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}

Probab=84.26  E-value=0.38  Score=34.62  Aligned_cols=30  Identities=7%  Similarity=-0.167  Sum_probs=26.3

Q ss_pred             ccccccchhccccc--ceEEEEecceEEEecC
Q psy12865        110 SDKASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       110 s~k~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      .+....++.||.+.  +||++++|+.|+|++.
T Consensus        30 ~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~   61 (86)
T 2jxb_A           30 EEVIVIAKWDYTAQQDQELDIKKNERLWLLDD   61 (86)
T ss_dssp             CCEEEEESSCCCCCSSSBCCCCTTEEEEEEEC
T ss_pred             CceEEEECccCCCCCCCEeccCCCCEEEEEec
Confidence            34566799999998  8999999999999995

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}

Probab=84.22  E-value=0.28  Score=33.42  Aligned_cols=27  Identities=4%  Similarity=-0.374  Sum_probs=24.0

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  .||++++|+.+.|++..
T Consensus         9 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   37 (69)
T 4esr_A            9 VVALYDYTANRSDELTIHRGDIIRVFFKD   37 (69)
T ss_dssp             EEESSCBCCCSTTBCCBCTTCEEEEEEEC
T ss_pred             EEECccCCCCCcCcCCCCCCCEEEEEEec
Confidence            4489999998  89999999999999864

>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A

Probab=84.02  E-value=0.29  Score=33.42  Aligned_cols=27  Identities=4%  Similarity=-0.145  Sum_probs=24.1

Q ss_pred             cccchhccccc--ceEEEEecceEEEecC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ...++.||.+.  +||++++||.++|++.
T Consensus         9 ~~~Alydy~~~~~~eLsf~~Gd~i~v~~~   37 (68)
T 1tg0_A            9 KVVAQFPYKSDYEDDLNFEKDQEIIVTSV   37 (68)
T ss_dssp             EEEESSCBCCSCTTBCCBCTTCEEEEEEE
T ss_pred             EEEECeeECcCCcCCCCCCCCCEEEEEEe
Confidence            44589999998  8999999999999986

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A

Probab=83.83  E-value=0.3  Score=32.45  Aligned_cols=29  Identities=0%  Similarity=-0.293  Sum_probs=24.6

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      +...++.||.+.  .||++.+|+.+.|++..
T Consensus         7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   37 (64)
T 4f14_A            7 RTYRAMYDYSAQDEDEVSFRDGDYIVNVQPI   37 (64)
T ss_dssp             -CEEESSCBCCCSTTBCCBCTTCEEEEEEEC
T ss_pred             EEEEECeeeCCcCCCcCCCCCCCEEEEEEeC
Confidence            345589999998  89999999999999864

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A

Probab=83.82  E-value=0.3  Score=33.19  Aligned_cols=26  Identities=4%  Similarity=-0.359  Sum_probs=23.4

Q ss_pred             ccchhccccc--ceEEEEecceEEEecC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ..++.||.+.  +||++++|+.+.|++.
T Consensus         9 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~   36 (67)
T 2o9s_A            9 AIAKFNFNGDTQVEMSFRKGERITLLRQ   36 (67)
T ss_dssp             EEECSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred             EEECccCCcCCcCccCCCCCCEEEEEEe
Confidence            3489999998  8999999999999985

>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=83.81  E-value=0.31  Score=33.28  Aligned_cols=28  Identities=4%  Similarity=-0.299  Sum_probs=24.8

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  .||++++|+.|+|++..
T Consensus         9 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   38 (71)
T 2cre_A            9 LARALYDNCPDCSDELAFSRGDILTILEQH   38 (71)
T ss_dssp             EEEESSCCCCSSSSBCCCCSSCCEEEEESC
T ss_pred             EEEECcccCcCCCCCCCCCCCCEEEEeEcC
Confidence            44589999998  89999999999999973

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}

Probab=83.81  E-value=0.3  Score=33.64  Aligned_cols=28  Identities=4%  Similarity=-0.057  Sum_probs=24.3

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  +||++++||.|.|++..
T Consensus         8 ~~~al~~y~~~~~~eLs~~~Gd~i~v~~~~   37 (71)
T 2fpf_A            8 THRAIFRFVPRHEDELELEVDDPLLVELQA   37 (71)
T ss_dssp             CEEECSCBCCSSTTBCCBCTTCEEEEEEEC
T ss_pred             EEEECeeECccCCCcccCcCCcEEEEeEec
Confidence            34589999998  89999999999999753

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}

Probab=83.81  E-value=0.27  Score=33.53  Aligned_cols=29  Identities=7%  Similarity=-0.331  Sum_probs=25.2

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ....++.||.+.  .||++++||.|+|++..
T Consensus         8 ~~~~al~~y~~~~~~eLs~~~Gd~i~v~~~~   38 (70)
T 2cuc_A            8 NMFVALHTYSAHRPEELDLQKGEGIRVLGKY   38 (70)
T ss_dssp             CCEECCSCBCCCSTTBCCBCTTCEEEEEEEE
T ss_pred             cEEEECeeECcCCCCcCCCCCCCEEEEEEec
Confidence            345699999998  89999999999999863

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}

Probab=83.79  E-value=0.29  Score=33.85  Aligned_cols=27  Identities=4%  Similarity=-0.418  Sum_probs=23.8

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  +||++++||.++|++..
T Consensus         6 ~~Alydy~~~~~~eLsf~~Gd~i~v~~~~   34 (68)
T 2ew3_A            6 CRGLYDFEPENQGELGFKEGDIITLTNQI   34 (68)
T ss_dssp             EEESSCBCCCSTTBCCBCTTCEEEEEEES
T ss_pred             EEEeeeECCCCCCccCCCCCCEEEEEEec
Confidence            3488999998  89999999999999963

>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*

Probab=83.79  E-value=1.6  Score=39.88  Aligned_cols=37  Identities=11%  Similarity=0.293  Sum_probs=31.1

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      +..|.|-...     .+|.|+|.|.+..+.|+..|+.++...
T Consensus       338 ~~~F~I~t~~-----rty~l~A~s~~e~~~Wi~aL~~~i~~p  374 (386)
T 3lju_X          338 PHGITIVTPD-----RKFLFACETESDQREWVAAFQKAVDRP  374 (386)
T ss_dssp             CEEEEEECSS-----CEEEEEESSHHHHHHHHHHHHHHHHSC
T ss_pred             CcEEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence            4779988543     369999999999999999999998643

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A

Probab=83.77  E-value=0.27  Score=34.06  Aligned_cols=28  Identities=4%  Similarity=-0.359  Sum_probs=24.6

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  .||++++||.++|++..
T Consensus         9 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   38 (73)
T 2dbm_A            9 CCRALYDFEPENEGELGFKEGDIITLTNQI   38 (73)
T ss_dssp             EEEESSCBCCCSTTCCCBCTTCEEECCBCS
T ss_pred             EEEEccccCCCCCCCccCCCCCEEEEEEec
Confidence            44589999998  89999999999999964

>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}

Probab=83.72  E-value=0.4  Score=32.99  Aligned_cols=29  Identities=14%  Similarity=-0.141  Sum_probs=25.7

Q ss_pred             cccccchhccccc--ceEEEEecceEEEecC
Q psy12865        111 DKASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       111 ~k~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      .+...++.||.+.  +||++.+|+.+.|++.
T Consensus        11 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~   41 (74)
T 2m0y_A           11 EKYGVAFYNYDARGADELSLQIGDTVHILET   41 (74)
T ss_dssp             CSCEEECSEECCCSSSBCCEETTEEEEEEEB
T ss_pred             CeEEEEceeeCCCCcCcccCCCCCEEEEEEc
Confidence            4456699999998  8999999999999997

>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=83.71  E-value=0.27  Score=34.83  Aligned_cols=29  Identities=7%  Similarity=-0.081  Sum_probs=25.6

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ....++.||.+.  .||++++||.|+|++..
T Consensus        18 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   48 (81)
T 1x43_A           18 RKARVLYDYDAANSTELSLLADEVITVFSVV   48 (81)
T ss_dssp             EEEEESSCCCCSSTTBCCCCTTCEEEEECCT
T ss_pred             eEEEEcccCCCCCCCcCCCCCCCEEEEEEcC
Confidence            455699999998  89999999999999974

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1

Probab=83.57  E-value=0.36  Score=35.01  Aligned_cols=27  Identities=0%  Similarity=-0.327  Sum_probs=24.2

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  +||++++||.|.|++..
T Consensus        20 ~~Alydy~a~~~~eLsf~~Gd~i~Vl~~~   48 (83)
T 1neg_A           20 VLALYDYQEKSPREVTMKKGDILTLLNST   48 (83)
T ss_dssp             EEESSCBCCSSTTBCCBCTTCEEEEEECC
T ss_pred             EEEccccCCCCCCccccCCCCEEEEEEec
Confidence            4489999998  89999999999999974

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=83.52  E-value=0.24  Score=33.88  Aligned_cols=29  Identities=10%  Similarity=-0.074  Sum_probs=25.1

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ....++.||.+.  .||++++|+.++|++..
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   38 (68)
T 2dmo_A            8 EAHRVLFGFVPETKEELQVMPGNIVFVLKKG   38 (68)
T ss_dssp             EEEEECSSCCCCSSSSCCCCTTCEEEECEEC
T ss_pred             CEEEECcCCCcCCcCCCCCCCCCEEEEEEeC
Confidence            345599999998  89999999999999864

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=83.50  E-value=0.49  Score=33.41  Aligned_cols=28  Identities=4%  Similarity=-0.105  Sum_probs=24.6

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  +||++++|+.|.|++..
T Consensus        12 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   41 (81)
T 2ysq_A           12 SAEAVWDHVTMANRELAFKAGDVIKVLDAS   41 (81)
T ss_dssp             EEEESSCCCCSSSSSCCCCTTCEEEEEECC
T ss_pred             EEEEeeeECCCCCCcCCCCCCCEEEEEEEc
Confidence            44599999998  89999999999999964

>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*

Probab=83.48  E-value=1.9  Score=38.57  Aligned_cols=44  Identities=18%  Similarity=0.272  Sum_probs=33.6

Q ss_pred             CCceeEEEecCCCC-----------------CCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         18 GDECKFAVWTGRAP-----------------ISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        18 gD~~kFeiW~~r~~-----------------~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      +.+..|+|-.....                 ....+|.|+|.|.+..+.|+..|+.++...
T Consensus       270 ~~~~~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~~~  330 (347)
T 2r09_A          270 RKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRD  330 (347)
T ss_dssp             SCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHHCC
T ss_pred             CCCCEEEEEeCCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence            45778999754210                 113579999999999999999999998755

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}

Probab=83.08  E-value=0.27  Score=33.78  Aligned_cols=25  Identities=4%  Similarity=-0.148  Sum_probs=22.7

Q ss_pred             cchhccccc--ceEEEEecceEEEecC
Q psy12865        115 SLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       115 ~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      .++.||.+.  +||++++||.|+|++.
T Consensus         5 ~Alydy~~~~~~eLs~~~Gd~i~v~~~   31 (65)
T 2fei_A            5 KVLFEYIPQNEDELELKVGDIIDINEE   31 (65)
T ss_dssp             ECSSCCCCCSTTBCCCCTTCEEECCCC
T ss_pred             EECccCCcCCcCccCCCCCCEEEEEEe
Confidence            478999998  8999999999999985

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=83.06  E-value=0.5  Score=33.30  Aligned_cols=27  Identities=0%  Similarity=-0.123  Sum_probs=24.3

Q ss_pred             cccchhccccc--ceEEEEecceEEEecC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ...++.||.+.  .||++++||.|+|++.
T Consensus        19 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~   47 (79)
T 1x6b_A           19 QVEITKAFFAKQADEVTLQQADVVLVLQQ   47 (79)
T ss_dssp             EEEESSCCCCCSSSBCCCCTTEEEEEEEE
T ss_pred             EEEECeeECCCCcCCcCCCCCCEEEEEEe
Confidence            44599999998  8999999999999996

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}

Probab=82.94  E-value=0.27  Score=34.46  Aligned_cols=26  Identities=15%  Similarity=-0.129  Sum_probs=23.4

Q ss_pred             ccchhccccc--ceEEEEecceEEEecC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ..++.||.+.  +||++++||.|.|++.
T Consensus         8 ~~Alydy~a~~~~eLs~~~Gd~i~v~~~   35 (73)
T 2lcs_A            8 AVALYDFEPENDNELRLAEGDIVFISYK   35 (73)
T ss_dssp             EEESSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred             EEECccCCCCCCCccCCcCCCEEEEEEE
Confidence            3489999998  8999999999999986

>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}

Probab=82.94  E-value=0.35  Score=32.96  Aligned_cols=28  Identities=7%  Similarity=-0.203  Sum_probs=24.5

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  .||++++|+.+.|++..
T Consensus        15 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   44 (72)
T 4glm_A           15 YGVALYRFQALEPNELDFEVGDKIRILATL   44 (72)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEEEC
T ss_pred             EEEECccCCCCCCCcCCCCCCCEEEEEEcc
Confidence            34589999998  89999999999999864

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}

Probab=82.86  E-value=0.37  Score=33.40  Aligned_cols=26  Identities=0%  Similarity=-0.309  Sum_probs=23.3

Q ss_pred             cchhccccc-ceEEEEecceEEEecCC
Q psy12865        115 SLEAKQLWV-KRLREVIQETYFSSALP  140 (227)
Q Consensus       115 ~v~~d~~a~-~elsv~~gqtve~le~~  140 (227)
                      .++.||.+. +||++++|+.|.|++..
T Consensus         4 ~alydy~~~~~eLs~~~Gd~i~v~~~~   30 (73)
T 2kxd_A            4 PPLPPYSAGGREVTMKKGDILTLLNST   30 (73)
T ss_dssp             CCCCSSCCCSCCCCBCTTCEEEEEECC
T ss_pred             EEeeeeCCCCCEeeEcCCCEEEEEEec
Confidence            478899987 89999999999999974

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=82.81  E-value=0.6  Score=33.18  Aligned_cols=29  Identities=3%  Similarity=-0.246  Sum_probs=25.0

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALPL  141 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~~  141 (227)
                      ...++.||.+.  .||++++||.|.|++...
T Consensus        19 ~~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~   49 (81)
T 1x6g_A           19 QCITKCEHTRPKPGELAFRKGDVVTILEACE   49 (81)
T ss_dssp             EEEESSCBSSCCTTCCCBCTTCEEEEEECCC
T ss_pred             EEEECCCCCcCCCCCCCCCCCCEEEEEeccC
Confidence            34589999997  899999999999999643

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A

Probab=82.71  E-value=0.4  Score=34.10  Aligned_cols=28  Identities=7%  Similarity=-0.286  Sum_probs=24.3

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  +||++++|+.|.|++..
T Consensus         7 ~~~Alydy~~~~~~eLs~~~Gd~i~vl~~~   36 (79)
T 3cqt_A            7 LFEALYDYEARTEDDLSFHKGEKFQILNSS   36 (79)
T ss_dssp             CEEESSCBCCCSTTBCCBCTTCEEEEEECT
T ss_pred             EEEECccCCCCCcCcCCCCCCCEEEEEEec
Confidence            34589999998  89999999999999864

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=82.62  E-value=0.3  Score=33.60  Aligned_cols=27  Identities=11%  Similarity=-0.199  Sum_probs=24.1

Q ss_pred             cccchhccccc--ceEEEEecceEEEecC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ...++.||.+.  +||++++||.+.|++.
T Consensus        10 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~   38 (69)
T 1uhf_A           10 EYIALYPYSSVEPGDLTFTEGEEILVTQK   38 (69)
T ss_dssp             EEECSSCBCCSSSSBCCBCTTCEEEECEE
T ss_pred             EEEEeeeECCCCcCccCCCCCCEEEEEEe
Confidence            44589999997  8999999999999986

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}

Probab=82.55  E-value=0.38  Score=32.66  Aligned_cols=27  Identities=4%  Similarity=-0.310  Sum_probs=23.4

Q ss_pred             cccchhcccc-c--ceEEEEecceEEEecC
Q psy12865        113 ASSLEAKQLW-V--KRLREVIQETYFSSAL  139 (227)
Q Consensus       113 ~~~v~~d~~a-~--~elsv~~gqtve~le~  139 (227)
                      ...++.||.| .  .||++++|+.+.|++.
T Consensus         8 ~~~al~dy~a~~~~~eLs~~~Gd~i~v~~~   37 (67)
T 2kxc_A            8 KVKTIFPHTAGSNKTLLSFAQGDVITLLIP   37 (67)
T ss_dssp             EEEESSCBCCSSCSSBCCBCTTCEEEESSS
T ss_pred             EEEEeecCCCCCCCCCCcCCCCCEEEEeEC
Confidence            3458999997 5  8999999999999985

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}

Probab=82.46  E-value=0.39  Score=34.64  Aligned_cols=28  Identities=18%  Similarity=-0.122  Sum_probs=25.0

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  +||++++||.|+|++..
T Consensus        19 ~~~alydy~~~~~~eLs~~~Gd~i~v~~~~   48 (91)
T 1wx6_A           19 VVQTLYPFSSVTEEELNFEKGETMEVIEKP   48 (91)
T ss_dssp             EEEESSCCCCSSSSBCCCCTTCEEEEEECC
T ss_pred             EEEEeecCCcCCCCcccCCCCCEEEEEECC
Confidence            34599999998  89999999999999974

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A

Probab=82.38  E-value=0.16  Score=35.62  Aligned_cols=29  Identities=10%  Similarity=-0.090  Sum_probs=25.5

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ....++.||.+.  +||++++||.|.|++..
T Consensus        21 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~   51 (77)
T 1awj_A           21 TLVIALYDYQTNDPQELALRCDEEYYLLDSS   51 (77)
T ss_dssp             SCCCCCCCBCCCCTTSCCBCSSSCCSCCCTT
T ss_pred             eEEEECccCCCCCcCCcCCCCCCEEEEEEec
Confidence            456699999998  89999999999999864

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=82.34  E-value=0.27  Score=34.85  Aligned_cols=27  Identities=4%  Similarity=-0.333  Sum_probs=24.4

Q ss_pred             ccccchhccccc--ceEEEEecceEEEec
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSA  138 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le  138 (227)
                      ++..++.||.+.  .||++++||.++|++
T Consensus        18 ~~~~Alydy~a~~~~eLs~~~Gd~i~v~~   46 (79)
T 2cud_A           18 DFLAVLSDYPSPDISPPIFRRGEKLRVIS   46 (79)
T ss_dssp             CEEEESSCSSCTTTSCCSSCTTCEEEEEE
T ss_pred             eEEEEccCCCCCCCCcCCCCCCCEEEEEe
Confidence            456699999997  899999999999998

>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=82.28  E-value=1.3  Score=35.95  Aligned_cols=37  Identities=14%  Similarity=0.324  Sum_probs=29.7

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      ....|.|-....-    -|||+|.+...+++|+.+|+..+-
T Consensus        94 ~~nTFVlK~~n~~----eyi~ea~d~~q~~sWla~Ir~C~~  130 (136)
T 1v5m_A           94 KDNTFVLKVENGA----EYILETIDSLQKHSWVADIQGCVD  130 (136)
T ss_dssp             CTTEECCBCTTSC----BEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             ccceEEEEecCCc----EEEEEcCCHHHHHHHHHHHHhhcC
Confidence            4557888754432    399999999999999999998864

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}

Probab=82.26  E-value=0.24  Score=33.92  Aligned_cols=27  Identities=4%  Similarity=-0.346  Sum_probs=24.0

Q ss_pred             cccchhccccc--ceEEEEecceEEEecC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ...++.||.+.  .||++++||.++|++.
T Consensus         9 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~   37 (70)
T 2ecz_A            9 EAIAKFNFNGDTQVEMSFRKGERITLLRQ   37 (70)
T ss_dssp             CEEESSCCCCCSTTBCCCCTTCBCEEEEE
T ss_pred             EEEECccCCCCCcCCcCCCCCCEEEEEEe
Confidence            34589999998  8999999999999985

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=82.19  E-value=0.34  Score=33.95  Aligned_cols=29  Identities=0%  Similarity=-0.343  Sum_probs=25.1

Q ss_pred             cccchhccccc--c-eEEEEecceEEEecCCC
Q psy12865        113 ASSLEAKQLWV--K-RLREVIQETYFSSALPL  141 (227)
Q Consensus       113 ~~~v~~d~~a~--~-elsv~~gqtve~le~~~  141 (227)
                      ...++.||.+.  . ||++++|+.|.|++...
T Consensus        16 ~~~alydy~~~~~~~eLs~~~Gd~i~v~~~~~   47 (80)
T 2v1r_A           16 FARALYDFVPENPEMEVALKKGDLMAILSKKD   47 (80)
T ss_dssp             EEEESSCBCCSSTTTBCCBCTTCEEEEEEEEC
T ss_pred             EEEECccCCCCCCCCEecCCCCCEEEEEECCC
Confidence            44599999998  7 99999999999999643

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=82.19  E-value=0.34  Score=35.04  Aligned_cols=29  Identities=3%  Similarity=-0.119  Sum_probs=25.3

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ....++.||.+.  .||++++||.|.|++..
T Consensus        18 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   48 (88)
T 2cub_A           18 MPAYVKFNYMAEREDELSLIKGTKVIVMEKC   48 (88)
T ss_dssp             EEEEESSCCCCCSTTBCCCCTTEEEEEEEEC
T ss_pred             CEEEEccccCCCCCCCcCCCCCCEEEEEEcc
Confidence            345589999998  89999999999999974

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A

Probab=82.02  E-value=0.39  Score=32.47  Aligned_cols=27  Identities=0%  Similarity=-0.186  Sum_probs=23.8

Q ss_pred             ccchhcccc-c--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLW-V--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a-~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+ .  +||++++|+.+.|++..
T Consensus         8 ~~alydy~~~~~~~eLs~~~Gd~i~v~~~~   37 (65)
T 2j05_A            8 VRAILPYTKVPDTDEISFLKGDMFIVHNEL   37 (65)
T ss_dssp             EEESSCBCCCTTSSBCCBCTTCEEEEEEEC
T ss_pred             EEEccccCCCCCCCcCcCCCCCEEEEeEec
Confidence            458999999 6  89999999999999853

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=81.69  E-value=0.38  Score=34.76  Aligned_cols=25  Identities=8%  Similarity=-0.336  Sum_probs=23.1

Q ss_pred             cchhccccc--ceEEEEecceEEEecC
Q psy12865        115 SLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       115 ~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      .++.||.+.  .||++++||.|+|++.
T Consensus        21 ~alydy~~~~~~eLsf~~Gd~i~v~~~   47 (90)
T 2yup_A           21 VAQYTFKGDLEVELSFRKGEHICLIRK   47 (90)
T ss_dssp             EECSCCCCCSSSBCCCCTTCEEEESSC
T ss_pred             EEeecCCcCCcCcCCCCCCCEEEEEEE
Confidence            489999998  8999999999999986

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1

Probab=81.63  E-value=0.45  Score=32.74  Aligned_cols=27  Identities=4%  Similarity=-0.316  Sum_probs=23.5

Q ss_pred             cccchhcccc-c--ceEEEEecceEEEecC
Q psy12865        113 ASSLEAKQLW-V--KRLREVIQETYFSSAL  139 (227)
Q Consensus       113 ~~~v~~d~~a-~--~elsv~~gqtve~le~  139 (227)
                      ...++.||.| .  .||++++|+.|+|++.
T Consensus         9 ~~~al~dy~a~~~~~eLs~~~Gd~i~v~~~   38 (72)
T 1spk_A            9 KVKTIFPHTAGNNKTLLSFAQGDVLTLLIP   38 (72)
T ss_dssp             EEECSSCBCCSSCSSBCCBCTTCEEEECCS
T ss_pred             EEEEeeeeCCCCCCCCCcCCCCCEEEEeEc
Confidence            4458999997 5  8999999999999985

>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=81.47  E-value=3.3  Score=31.36  Aligned_cols=34  Identities=24%  Similarity=0.281  Sum_probs=27.7

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHH
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVI   58 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL   58 (227)
                      +..|.|-...     ..|.|+|.|.|..+.|++.|+...
T Consensus        72 ~~~Fki~~~~-----~~y~f~A~s~e~~~~Wl~al~~A~  105 (112)
T 2coc_A           72 GHVWKLQWAK-----QSWYLSASSAELQQQWLETLSTAA  105 (112)
T ss_dssp             SEEEEEEETT-----EEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEecCC-----eEEEEEcCCHHHHHHHHHHHHHHh
Confidence            4578887432     359999999999999999999864

>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A

Probab=81.46  E-value=1.2  Score=39.17  Aligned_cols=38  Identities=8%  Similarity=0.089  Sum_probs=29.5

Q ss_pred             EEEecCCCCCCCCccccccchHHHHHHHHHHHHHHHhh
Q psy12865        134 YFSSALPLAAPPKSPASASSLEAKQLWVKRLREVIQET  171 (227)
Q Consensus       134 ve~le~~~~~p~k~vlKass~e~Kq~WVk~iREViQE~  171 (227)
                      .+++.....+|...+|.|+|.+-|+.|++.|+++|+.-
T Consensus       336 ~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~~~  373 (377)
T 3p6a_A          336 FYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSL  373 (377)
T ss_dssp             EEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred             eEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhc
Confidence            34454444566666789999999999999999998753

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}

Probab=81.39  E-value=0.51  Score=33.30  Aligned_cols=28  Identities=7%  Similarity=-0.272  Sum_probs=24.6

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ....++.||.+.  +||++++|+.|+|++.
T Consensus        18 ~~~~Alydy~a~~~~eLsf~~Gd~i~Vl~~   47 (72)
T 2l0a_A           18 RKVRAIYDFEAAEDNELTFKAGEIITVLDD   47 (72)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred             eEEEECCccCCCCCCccCCCCCCEEEEEEe
Confidence            345599999998  8999999999999985

>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=81.38  E-value=0.44  Score=34.68  Aligned_cols=27  Identities=0%  Similarity=-0.354  Sum_probs=24.1

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  +||++++||.++|++..
T Consensus         8 ~~Alydy~a~~~~eLsf~~Gd~i~v~~~~   36 (93)
T 1uff_A            8 YRALYPFEARNHDEMSFNSGDIIQVDEKT   36 (93)
T ss_dssp             EEESSCBCCCSSSCCCBCTTCEEEECSSC
T ss_pred             EEECccCCCCCCCCcCCCCCCEEEEeEcc
Confidence            3489999998  89999999999999974

>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}

Probab=81.35  E-value=1.7  Score=39.24  Aligned_cols=38  Identities=18%  Similarity=0.369  Sum_probs=29.5

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      +.+|+|-+....   .+|+|||.|.+..+.|+..|..++..
T Consensus       362 ~~cF~i~~~~~~---~~~~l~A~s~~e~~~Wi~ai~~a~~~  399 (407)
T 4h8s_A          362 RYCFQITTPNGK---SGIILQAESRKENEEWICAINNISRQ  399 (407)
T ss_dssp             SSEEEEECTTSS---CCEEEECSSSHHHHHHHHHHHHHHSC
T ss_pred             CceEEEEecCCC---ceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence            346888753221   24999999999999999999988654

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=81.09  E-value=0.23  Score=33.83  Aligned_cols=28  Identities=7%  Similarity=-0.070  Sum_probs=24.5

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ....++.||.+.  .||++++||.|+|++.
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~   37 (68)
T 1wi7_A            8 RRCQVAFSYLPQNDDELELKVGDIIEVVGE   37 (68)
T ss_dssp             CCEEESSCBCCSSTTBCCBCTTCEECCCEE
T ss_pred             CEEEECccCCcCCCCCccCcCCCEEEEEEc
Confidence            345599999998  8999999999999985

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A

Probab=81.03  E-value=0.4  Score=31.94  Aligned_cols=27  Identities=4%  Similarity=-0.138  Sum_probs=23.8

Q ss_pred             cccchhccccc--ceEEEEecceEEEecC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ...++.||.+.  .||++.+|+.|.|++.
T Consensus         9 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~   37 (65)
T 3u23_A            9 QCKVLFEYIPQNEDELELKVGDIIDINEE   37 (65)
T ss_dssp             EEEECSCBCCSSTTBCCBCTTCEEEEEEE
T ss_pred             EEEEeeeeCCCCcCCcCCCCCCEEEEEEe
Confidence            34589999998  8999999999999985

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A

Probab=80.68  E-value=0.37  Score=34.22  Aligned_cols=29  Identities=3%  Similarity=-0.253  Sum_probs=25.6

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ....++.||.+.  +||++++||.+.|++..
T Consensus        26 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~   56 (86)
T 2oi3_A           26 IIVVALYDYEAIHHEDLSFQKGDQMVVLEES   56 (86)
T ss_dssp             EEEEESSCCCCSSSSCCCCCTTCEEEEEEES
T ss_pred             cEEEECccCCCCCCCcCcCCCCCEEEEEEcC
Confidence            455699999997  89999999999999964

>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*

Probab=80.57  E-value=1.9  Score=37.46  Aligned_cols=39  Identities=15%  Similarity=0.256  Sum_probs=30.5

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ..+..|+|-...     .+|.|+|.|.+..+.|+..|+.++...
T Consensus        76 ~~~~~F~I~t~~-----rty~l~A~se~e~~~Wi~aL~~~~~~~  114 (264)
T 1qqg_A           76 KNKHLVALYTRD-----EHFAIAADSEAEQDSWYQALLQLHNRA  114 (264)
T ss_dssp             SCSSEEEEEESS-----CEEEEECSSHHHHHHHHHHHHHHC---
T ss_pred             CCCcEEEEEECC-----EEEEEEeCCHHHHHHHHHHHHHHHHhc
Confidence            456789998542     369999999999999999999986654

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}

Probab=80.14  E-value=3  Score=31.90  Aligned_cols=30  Identities=7%  Similarity=-0.125  Sum_probs=26.1

Q ss_pred             ccccccchhccccc--ceEEEEecceEEEecC
Q psy12865        110 SDKASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       110 s~k~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ......++.||.+.  +||++++|+.|.|++.
T Consensus        58 ~~~~~~Alydy~a~~~~eLsf~~Gd~i~vl~~   89 (119)
T 2rqr_A           58 KERHGVAIYNFQGSGAPQLSLQIGDVVRIQET   89 (119)
T ss_dssp             CCEEEEBCSCBCCCSTTBCCBCTTCEEEEEEE
T ss_pred             CceEEEEccccCCCCCCcccCcCCCEEEEEEc
Confidence            34556699999998  9999999999999995

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A

Probab=80.11  E-value=0.46  Score=34.30  Aligned_cols=29  Identities=0%  Similarity=-0.343  Sum_probs=25.1

Q ss_pred             cccchhccccc--c-eEEEEecceEEEecCCC
Q psy12865        113 ASSLEAKQLWV--K-RLREVIQETYFSSALPL  141 (227)
Q Consensus       113 ~~~v~~d~~a~--~-elsv~~gqtve~le~~~  141 (227)
                      ...++.||.+.  + ||++++||.|.|++...
T Consensus        16 ~~~alydy~~~~~~~eLsf~~Gd~i~v~~~~~   47 (92)
T 1jqq_A           16 FARALYDFVPENPEMEVALKKGDLMAILSKKD   47 (92)
T ss_dssp             EEEESSBBCCSSTTTBCCBCTTCEEEEEEEEC
T ss_pred             EEEECccCCCCCCCCCcCCCCCCEEEEEECCC
Confidence            44599999998  7 99999999999999643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	227
d1ntya2	121	b.55.1.1 (A:1415-1535) Triple functional domain pr	2e-13
d1fhoa_	119	b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis ele	5e-13
d1kz7a2	147	b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse	9e-10
d1txda2	114	b.55.1.1 (A:1020-1133) Rho guanine nucleotide exch	2e-07
d1v61a_	132	b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (M	2e-05
d1xcga2	140	b.55.1.1 (A:942-1081) Rho guanine nucleotide excha	2e-05
d1dbha2	133	b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {H	1e-04
d1ki1b2	142	b.55.1.1 (B:1439-1580) GEF of intersectin {Human (	6e-04

>d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]} Length = 121

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Triple functional domain protein TRIO
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.3 bits (151), Expect = 2e-13
 Identities = 41/59 (69%), Positives = 49/59 (83%)

Query: 2   KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE 60
           K +L TSELGVTEH+EGD CKFA+W GR P SD +I+LKASS+E KQ W+K +REVIQE
Sbjct: 61  KSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQE 119

>d1fhoa_ b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 119

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: UNC-89
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 61.5 bits (149), Expect = 5e-13
 Identities = 9/62 (14%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 1   MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLK--ASSLEAKQLWVKRLREVI 58
               +   +  + +H   DE    +      +   RI  K   +S   ++ W++ + E  
Sbjct: 53  HYSSIRLDKYNIRQH-TTDEDTIVLQPQEPGLPSFRIKPKDFETSEYVRKAWLRDIAEEQ 111

Query: 59  QE 60
           ++
Sbjct: 112 EK 113

>d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]} Length = 147

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dbl's big sister, Dbs
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.2 bits (127), Expect = 9e-10
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)

Query: 2   KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE 60
           K  L  + +G+TE+++GD  KF +W           +++A + E K  WV  +R+V+  
Sbjct: 74  KQSLNMTAVGITENVKGDTKKFEIWYNAREEV---YIIQAPTPEIKAAWVNAIRKVLTS 129

>d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]} Length = 114

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho guanine nucleotide exchange factor 12
species: Human (Homo sapiens), gamma isoform [TaxId: 9606]

 Score = 46.2 bits (109), Expect = 2e-07
 Identities = 7/58 (12%), Positives = 18/58 (31%), Gaps = 2/58 (3%)

Query: 2   KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ 59
              +  S + V +    ++  F +             L A ++  K +W   +  +  
Sbjct: 58  SPVIKLSTVLVRQVATDNKALFVISMSDNGAQ--IYELVAQTVSEKTVWQDLICRMAA 113

>d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]} Length = 132

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rac/CDC42 GEF 6, alpha-pix
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (95), Expect = 2e-05
 Identities = 9/64 (14%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 1   MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE 60
            +G++  + + V    E +          + +   RI++  ++ +  Q W+++L  + + 
Sbjct: 70  YQGKIPIAGMVVNRLDEIEGSDCMFEITGSTVE--RIVVHCNNNQDFQEWMEQLNRLTKS 127

Query: 61  TYFS 64
              S
Sbjct: 128 GPSS 131

>d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]} Length = 140

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 2e-05
 Identities = 8/55 (14%), Positives = 19/55 (34%)

Query: 5   LMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ 59
           ++     +   +  D+  F +             L A +   K  W++ L E ++
Sbjct: 84  VLKLNAVLIRSVATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVR 138

>d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]} Length = 133

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Son of sevenless-1 (sos-1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 1e-04
 Identities = 10/59 (16%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 1   MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ 59
           +K +    ++ + +  + +E K A         +  ++  A S E K  W+  L  +  
Sbjct: 73  LKEKFFMRKVQINDKDDTNEYKHAFEI--ILKDENSVIFSAKSAEEKNNWMAALISLQY 129

>d1ki1b2 b.55.1.1 (B:1439-1580) GEF of intersectin {Human (Homo sapiens) [TaxId: 9606]} Length = 142

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: GEF of intersectin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 6e-04
 Identities = 9/59 (15%), Positives = 22/59 (37%), Gaps = 3/59 (5%)

Query: 2   KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE 60
           K  +  +E+ V    +    +           D    L+A S+  +  WV++++   + 
Sbjct: 78  KTPIFLNEVLVKLPTDPSGDEPIFHISH---IDRVYTLRAESINERTAWVQKIKAASEL 133

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	227
d1kz7a2	147	Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId	99.2
d1ntya2	121	Triple functional domain protein TRIO {Human (Homo	99.19
d1fhoa_	119	UNC-89 {Nematode (Caenorhabditis elegans) [TaxId:	99.16
d1txda2	114	Rho guanine nucleotide exchange factor 12 {Human (	99.06
d1dbha2	133	Son of sevenless-1 (sos-1) {Human (Homo sapiens) [	97.95
d1v61a_	132	Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [	97.9
d1xcga2	140	Rho guanine nucleotide exchange factor 11, PDZ-Rho	97.81
d1zc3b1	109	Exocyst complex protein EXO84 {Rat (Rattus norvegi	97.75
d1ki1b2	142	GEF of intersectin {Human (Homo sapiens) [TaxId: 9	97.52
d2dfka2	162	Rho guanine nucleotide exchange factor 9, Collybis	97.11
d1qqga1	103	Insulin receptor substrate 1, IRS-1 {Human (Homo s	95.78
d1u5da1	106	Src kinase-associated phosphoprotein SKAP55 (SCAP1	95.54
d1faoa_	100	Dual adaptor of phosphotyrosine and 3-phosphoinosi	95.54
d1x1ga1	116	Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]}	95.31
d2fjla1	101	Phosphoinositide phospholipase C, PLC-gamma-1 {Rat	94.84
d1uhca_	79	Hypothetical protein Baa76854.1 (KIAA1010) {Human	94.78
d1wjma_	123	beta-spectrin {Human (Homo sapiens), brain 2 isofo	94.63
d1ntya2	121	Triple functional domain protein TRIO {Human (Homo	94.44
d1v89a_	118	Rho-GTPase-activating protein 25 (KIAA0053) {Human	94.05
d1eaza_	103	Tapp1 {Human (Homo sapiens) [TaxId: 9606]}	93.95
d1opka1	57	Abl tyrosine kinase, SH3 domain {Mouse (Mus muscul	93.93
d2coda1	102	Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 96	93.91
d1wg7a_	150	Dedicator of cytokinesis protein 9, DOCK9 {Human (	93.68
d1u5fa1	111	Src-associated adaptor protein Skap2 {Mouse (Mus m	93.62
d1v5ma_	136	SH2 and PH domain-containing adapter protein APS {	93.29
d1ckaa_	57	C-Crk, N-terminal SH3 domain {Mouse (Mus musculus)	93.26
d1wlpb1	53	p47pox (neutrophil cytosolic factor 1) {Human (Hom	93.15
d1ng2a1	58	p47pox (neutrophil cytosolic factor 1) {Human (Hom	93.15
d1upqa_	107	Phosphoinositol 3-phosphate binding protein-1, PEP	92.99
d1ng2a2	118	p47pox (neutrophil cytosolic factor 1) {Human (Hom	92.66
d1wfwa_	74	Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}	92.56
d1efna_	57	Fyn proto-oncogene tyrosine kinase, SH3 domain {Hu	92.55
d1plsa_	113	Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}	92.4
d1unqa_	118	Rac-alpha serine/threonine kinase {Human (Homo sap	92.38
d1sema_	58	Growth factor receptor-bound protein 2 (GRB2), N-	92.32
d2rn8a1	53	Bruton's tyrosine kinase {Mus musculus [TaxId: 100	92.32
d1u5sa1	71	Nck-2 {Human (Homo sapiens) [TaxId: 9606]}	92.26
d1fmka1	64	c-src protein tyrosine kinase {Human (Homo sapiens	92.13
d1gcqa_	56	Growth factor receptor-bound protein 2 (GRB2), N-	92.13
d1utia_	57	Grb2-related adaptor protein 2 (Mona/Gads) {Mouse	92.11
d1btka_	169	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	92.02
d1x1fa1	136	Signal-transducing adaptor protein 1, STAP-1 {Huma	91.97
d1btna_	106	beta-spectrin {Mouse (Mus musculus), brain [TaxId:	91.95
d1wi1a_	126	Calcium-dependent activator protein for secretion,	91.81
d1wgqa_	109	FYVE, RhoGEF and PH domain containing protein 6, F	91.79
d1ujya_	76	Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606	91.64
d1omwa2	119	G-protein coupled receptor kinase 2 (beta-adrenerg	91.61
d1uj0a_	58	Signal transducing adaptor molecule Stam2 {Mouse (	91.59
d1j3ta_	74	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	91.45
d1k4us_	62	p67phox {Human (Homo sapiens) [TaxId: 9606]}	91.43
d1zuua1	56	BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [Ta	91.35
d2coca1	99	FYVE, RhoGEF and PH domain containing protein 3, F	91.33
d1oota_	58	Hypothetical protein YFR024c {Baker's yeast (Sacch	91.28
d1i07a_	59	EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 1009	91.27
d1txda2	114	Rho guanine nucleotide exchange factor 12 {Human (	91.14
d1arka_	60	SH3 domain from nebulin {Human (Homo sapiens) [Tax	91.11
d1k9aa1	71	Carboxyl-terminal src kinase (csk) {Human (Homo sa	90.94
d1u06a1	55	alpha-Spectrin, SH3 domain {Chicken (Gallus gallus	90.93
d1ue9a_	80	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	90.6
d2cofa1	95	KIAA1914 {Human (Homo sapiens) [TaxId: 9606]}	90.6
d1xcga2	140	Rho guanine nucleotide exchange factor 11, PDZ-Rho	90.43
d2j59m1	133	Rho GTPase-activating protein 21 {Human (Homo sapi	90.39
d1ug1a_	92	Hypothetical protein Baa76854.1 (KIAA1010) {Human	90.39
d1jo8a_	58	Actin binding protein ABP1 {Baker's yeast (Sacchar	90.29
d1ycsb2	63	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	90.18
d1v5pa_	126	Tapp2 {Mouse (Mus musculus) [TaxId: 10090]}	89.94
d2iima1	62	p56-lck tyrosine kinase, SH3 domain {Human (Homo s	89.26
d1uhfa_	69	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	89.24
d2coaa1	112	Protein kinase c, d2 type {Human (Homo sapiens) [T	89.21
d1uffa_	93	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	89.05
d1qcfa1	65	Hemapoetic cell kinase Hck {Human (Homo sapiens) [	89.02
d1gria1	56	Growth factor receptor-bound protein 2 (GRB2), N-	88.94
d2elba2	101	DCC-interacting protein 13-alpha, APPL1 {Human (Ho	88.85
d1droa_	122	beta-spectrin {Fruit fly (Drosophila melanogaster)	88.84
d2i5fa1	104	Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}	88.7
d1ugva_	72	Olygophrenin-1 like protein (KIAA0621) {Human (Hom	88.62
d1fgya_	127	Grp1 {Mouse (Mus musculus) [TaxId: 10090]}	87.98
d1awwa_	67	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	87.89
d1gl5a_	67	tyrosine kinase tec {Mouse (Mus musculus) [TaxId:	87.58
d1v88a_	130	Oxysterol binding protein-related protein 8 (ORP-8	87.35
d1foea2	162	GEF of TIAM1 (T-Lymphoma invasion and metastasis i	87.21
d1v61a_	132	Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [	86.87
d1udla_	98	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	86.61
d1kz7a2	147	Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId	86.53
d1v5ua_	117	SET binding factor 1, Sbf1 {Mouse (Mus musculus) [	84.88
d1spka_	72	BAI1-associated protein 2-like 1 (RIKEN cDNA 13000	84.02
d2v1ra1	67	Peroxisomal membrane protein Pex13p {Baker's yeast	83.4
d1maia_	119	Phospholipase C delta-1 {Rat (Rattus norvegicus) [	83.18
d1bb9a_	83	Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 101	82.0
d1u5ea1	209	Src-associated adaptor protein Skap2 {Mouse (Mus m	81.09
d1w1ha_	147	3-phosphoinositide dependent protein kinase-1 {Hum	80.08

>d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dbl's big sister, Dbs
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.20  E-value=5.1e-12  Score=99.82  Aligned_cols=59  Identities=29%  Similarity=0.572  Sum_probs=53.9

Q ss_pred             CCCccccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhhc
Q psy12865          1 MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQETY   62 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q~   62 (227)
                      ||+++.++++++++++++|+++|+||.++..   ..|+|+|+|+|.|++|+++|+++|++|.
T Consensus        73 ~k~~~~~~~~~v~~~~~~~~~~f~~~~~~~~---~~~~l~a~s~eeK~~W~~~I~~~l~~q~  131 (147)
T d1kz7a2          73 YKQSLNMTAVGITENVKGDTKKFEIWYNARE---EVYIIQAPTPEIKAAWVNAIRKVLTSQL  131 (147)
T ss_dssp             EEEEEEGGGEEEECCBTTBTTEEEEEETTTT---EEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred             EeeEEecCCceeEecCCCCcceEEEEeCCCC---cEEEEEeCCHHHHHHHHHHHHHHHHHHH
Confidence            5778899999999999999999999987643   4699999999999999999999999993

>d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Triple functional domain protein TRIO
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=8.2e-12  Score=94.31  Aligned_cols=61  Identities=67%  Similarity=1.113  Sum_probs=55.7

Q ss_pred             CCCccccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865          1 MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ||..+.+.+++++++.++++++|.||....+.+...|+|+|+|++.|+.|+++|+++|++|
T Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~l~a~s~~eK~~W~~~I~~~i~eq  120 (121)
T d1ntya2          60 YKSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQER  120 (121)
T ss_dssp             EEEEEEGGGEEEECCCTTCTTEEEEEESSSCCTTTCEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred             EEeeEEecceEEEEcCCCCCceEEEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhh
Confidence            5778899999999999999999999976666667789999999999999999999999987

>d1fhoa_ b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: UNC-89
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.16  E-value=3.5e-12  Score=99.21  Aligned_cols=58  Identities=10%  Similarity=0.162  Sum_probs=49.2

Q ss_pred             CCCccccccccceeeccCCceeEEEecCCCCCCC--ceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865          1 MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISD--CRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~kFeiW~~r~~~s~--~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      ||++|+|++++|+|++ ||+++|+||.+......  -.|+++|+|.++|++|+++|++.++
T Consensus        53 ~K~~i~l~~~~v~e~~-gd~~~F~i~~~~~~~~~~~~~~~~~a~s~~~K~~Wv~~I~e~~~  112 (119)
T d1fhoa_          53 HYSSIRLDKYNIRQHT-TDEDTIVLQPQEPGLPSFRIKPKDFETSEYVRKAWLRDIAEEQE  112 (119)
T ss_dssp             SCCEEESSSCEEEEEC-TTCCEEEEECCSTTCCCBCCCCCSSSSCSHHHHHHHHHHHTCCH
T ss_pred             EecEEECCceEEEEcC-CCCcEEEEEeCCCCCCcceEEEEEecCCHHHHHHHHHHHHHHHH
Confidence            7999999999999997 78899999987754332  3567788999999999999998744

>d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho guanine nucleotide exchange factor 12
species: Human (Homo sapiens), gamma isoform [TaxId: 9606]

Probab=99.06  E-value=9.5e-11  Score=88.60  Aligned_cols=57  Identities=12%  Similarity=0.139  Sum_probs=49.7

Q ss_pred             CCCccccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865          1 MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      ||+.|++++++++|++.|+++.|.||....+  ...|+|||+|++.|+.|+++|++++.
T Consensus        57 ~~~~i~l~~l~v~e~~~d~~~~fli~~~~~~--~~~y~l~A~s~~eK~~W~~~I~~~~~  113 (114)
T d1txda2          57 FSPVIKLSTVLVRQVATDNKALFVISMSDNG--AQIYELVAQTVSEKTVWQDLICRMAA  113 (114)
T ss_dssp             CCSEEEGGGEEEEECCC-CCEEEEEEECSSC--EEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             ecCcEEcccEEEEEcCCCCCCEEEEEecCCC--ceEEEEEcCCHHHHHHHHHHHHHHhc
Confidence            5778999999999999999999999976643  24799999999999999999999874

>d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Son of sevenless-1 (sos-1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=3.9e-06  Score=63.28  Aligned_cols=58  Identities=17%  Similarity=0.275  Sum_probs=45.0

Q ss_pred             CCCccccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865          1 MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      ||..|.+..+.|.+...+++.+|+++....+  ...|+|+|+|++.|..|++.|..++..
T Consensus        73 ~k~~i~l~~~~v~~~~~~~~~~~~f~i~~~~--~~~~~l~a~s~~eK~~W~~~l~~~~~r  130 (133)
T d1dbha2          73 LKEKFFMRKVQINDKDDTNEYKHAFEIILKD--ENSVIFSAKSAEEKNNWMAALISLQYR  130 (133)
T ss_dssp             EEEEEESCSCEEEECCCSSSCCSEEEECCTT--SCCEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred             EEeeeecccccccccCCCcccccceeEEcCC--CcEEEEEECCHHHHHHHHHHHHHHHhh
Confidence            5677889999999999999887655422211  125999999999999999999987543

>d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rac/CDC42 GEF 6, alpha-pix
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.90  E-value=2e-06  Score=65.50  Aligned_cols=56  Identities=16%  Similarity=0.278  Sum_probs=41.8

Q ss_pred             CCCccccccccceeeccCCcee--EEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865          1 MKGRLMTSELGVTEHIEGDECK--FAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~k--FeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      ||..|.+..+.+++.-.+++.+  |.|....    .++|+|+|.|++.|+.|+++|.++++.
T Consensus        70 ~k~~i~l~~~~v~~~~~~~~~~~~f~i~~~~----~~~~~l~a~s~eek~~Wv~~L~~~i~~  127 (132)
T d1v61a_          70 YQGKIPIAGMVVNRLDEIEGSDCMFEITGST----VERIVVHCNNNQDFQEWMEQLNRLTKS  127 (132)
T ss_dssp             EEEEECTTTCBCSTTCSSSSSCCCEEEECSS----SCEEEECCCCSHHHHHHHHHHHHHHTT
T ss_pred             EeeecchhhccccccccccCccceEEEeCCC----CCEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence            4566778888888765555555  5554322    246999999999999999999999753

>d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=2.6e-05  Score=59.04  Aligned_cols=50  Identities=16%  Similarity=0.167  Sum_probs=40.7

Q ss_pred             cceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         11 GVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        11 GltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      .+.+.+.+|+..|.|+..........|+|||+|++.|..|+..|++.+.+
T Consensus        90 ~~~~~~~~~~~~f~li~~~~~~~~~~~~l~A~s~~eK~~Wi~~i~~aI~n  139 (140)
T d1xcga2          90 VLIRSVATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN  139 (140)
T ss_dssp             EEEEECSSCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCCCCCeEEEEEcCCCCCceEEEEEcCCHHHHHHHHHHHHHHHHc
Confidence            34567888999999996544444567999999999999999999998864

>d1zc3b1 b.55.1.1 (B:171-279) Exocyst complex protein EXO84 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Exocyst complex protein EXO84
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.75  E-value=8.1e-06  Score=59.49  Aligned_cols=57  Identities=14%  Similarity=0.081  Sum_probs=45.7

Q ss_pred             CCCccccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865          1 MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      ||+.|.+..+.+.+.-.+++.+++++...   +.+.|+++|.|++.|..|+..|++...+
T Consensus        48 ~~~~~~l~~~~v~~~~d~~~~~n~f~i~~---~~~~~~~~a~s~~eK~~W~~~l~~a~~~  104 (109)
T d1zc3b1          48 YNALYPLDRLAVVNVKDNPPMKDMFKLLM---FPESRIFQAENAKIKREWLEVLEETKRA  104 (109)
T ss_dssp             EEEEEETTTCEEEEECCBTTBSSEEEEEE---TTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             eeeEEeccceEEEEeecccccceEEEEcc---CCCEEEEEECCHHHHHHHHHHHHHHHHH
Confidence            46678899999999888888886666432   2346999999999999999999987653

>d1ki1b2 b.55.1.1 (B:1439-1580) GEF of intersectin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: GEF of intersectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=2.8e-05  Score=59.16  Aligned_cols=58  Identities=16%  Similarity=0.208  Sum_probs=45.4

Q ss_pred             CCCccccccccceeeccCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865          1 MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ||..|.++.+.+.+...+...+|.++....   ...|+|+|+|++.|..|++.|++.+++.
T Consensus        77 ~~~~i~l~~l~v~~~~d~~~~~~~~~~~~~---~~~~~l~a~s~~ek~~W~~~I~~Ai~~~  134 (142)
T d1ki1b2          77 YKTPIFLNEVLVKLPTDPSGDEPIFHISHI---DRVYTLRAESINERTAWVQKIKAASELY  134 (142)
T ss_dssp             CSSCEEGGGEEEECCSSSCCC---CEEEET---TEEEECBCSSHHHHHHHHHHHHHHHHHH
T ss_pred             EEcccchhhheeeccCCcccceeEEEecCC---CEEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence            677889999999998777777777774432   2369999999999999999999987754

>d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho guanine nucleotide exchange factor 9, Collybistin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.11  E-value=0.00015  Score=56.24  Aligned_cols=54  Identities=26%  Similarity=0.392  Sum_probs=40.2

Q ss_pred             CCCccccccccceeeccCCc--------eeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHH
Q psy12865          1 MKGRLMTSELGVTEHIEGDE--------CKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREV   57 (227)
Q Consensus         1 yK~slk~s~lGltE~VegD~--------~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Irei   57 (227)
                      ||..+.+..+.+.+...++.        ..|.|+....+   ..|+|+|.|++.|..|++.|++-
T Consensus        70 ~k~~i~L~~~~v~~~~~~~~~~~~~~~~~~f~i~~~~~~---~~~~~~A~s~~eK~~W~~~l~~~  131 (162)
T d2dfka2          70 YKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNKETE---EVHLFFAKKLEEKIRWLRAFREE  131 (162)
T ss_dssp             EEEEEEGGGEEEEECCSEECSSSCCEESSEEEEEESSSS---CEEEEECSSHHHHHHHHHHHHHH
T ss_pred             EccccchhhceeeecccccccccCccccceEEEEECCCC---eEEEEEeCCHHHHHHHHHHHHHH
Confidence            45666677777777665543        25889854433   25999999999999999999864

>d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Phosphotyrosine-binding domain (PTB)
domain: Insulin receptor substrate 1, IRS-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.78  E-value=0.0075  Score=41.78  Aligned_cols=36  Identities=17%  Similarity=0.311  Sum_probs=30.3

Q ss_pred             cCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHH
Q psy12865         17 EGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREV   57 (227)
Q Consensus        17 egD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Irei   57 (227)
                      ...++.|.|.+..+     .|.|+|.|.+..+.|+..|++|
T Consensus        67 ~~~~~~f~i~t~~r-----~~~l~A~s~~e~~~Wi~al~~l  102 (103)
T d1qqga1          67 SKNKHLVALYTRDE-----HFAIAADSEAEQDSWYQALLQL  102 (103)
T ss_dssp             SSCSSEEEEEESSC-----EEEEECSSHHHHHHHHHHHHHH
T ss_pred             CCCceEEEEEeCCe-----EEEEEcCCHHHHHHHHHHHHhh
Confidence            34567899986543     5999999999999999999987

>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src kinase-associated phosphoprotein SKAP55 (SCAP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.54  E-value=0.011  Score=40.77  Aligned_cols=38  Identities=16%  Similarity=0.281  Sum_probs=31.6

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      .+..|+|......    .|+|||.|.+..+.|+..|..++++
T Consensus        67 ~~~~f~i~~~~~~----~~~f~a~s~~e~~~W~~ai~~~i~~  104 (106)
T d1u5da1          67 KESCFELTSQDRR----TYEFTATSPAEARDWVDQISFLLKD  104 (106)
T ss_dssp             GGGEEEEECSSSC----CEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             CceeEEEEcCCCc----EEEEEeCCHHHHHHHHHHHHHHHHH
Confidence            4567999875432    4999999999999999999999875

>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.54  E-value=0.013  Score=40.80  Aligned_cols=37  Identities=19%  Similarity=0.102  Sum_probs=30.4

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      +.+..|.|-+..     .+|.|+|.|.+..+.|++.|++.|.
T Consensus        62 ~~~~~F~i~~~~-----r~~~l~a~s~~~~~~Wi~ai~~~i~   98 (100)
T d1faoa_          62 ERVNCFCLVFPF-----RTFYLCAKTGVEADEWIKILRWKLS   98 (100)
T ss_dssp             SSSSEEEEEETT-----EEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCC-----eEEEEEeCCHHHHHHHHHHHHHHHh
Confidence            346679998644     3599999999999999999998764

>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.31  E-value=0.0093  Score=41.45  Aligned_cols=34  Identities=21%  Similarity=0.388  Sum_probs=28.3

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHH
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREV   57 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Irei   57 (227)
                      +..|.|..+...    .|.|+|.|.+.++.|++.|++|
T Consensus        82 ~~~f~i~~~~~~----~~~f~a~s~ee~~~Wi~ai~~~  115 (116)
T d1x1ga1          82 GNLFKVITKDDT----HYYIQASSKAERAEWIEAIKKL  115 (116)
T ss_dssp             SSCEEECCTTCC----CEEECCSSHHHHHHHHHHHHHH
T ss_pred             cceeEEEeCCCe----EEEEECCCHHHHHHHHHHHHhh
Confidence            456888876543    4999999999999999999987

>d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phosphoinositide phospholipase C, PLC-gamma-1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.84  E-value=0.03  Score=38.59  Aligned_cols=39  Identities=31%  Similarity=0.382  Sum_probs=30.1

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      .+-.|.|.....  ...+|+|+|.|.+..+.|+..|+++.+
T Consensus        61 ~~~~f~i~~~~~--~~~~~~~~a~s~~e~~~Wi~ai~~~~~   99 (101)
T d2fjla1          61 RLFVFSISMPSV--AQWSLDVAADSQEELQDWVKKIREVAQ   99 (101)
T ss_dssp             CSCEEEEECTTT--SSCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred             ccceeEEecccc--ccEEEEEEeCCHHHHHHHHHHHHHHHh
Confidence            344577775443  224699999999999999999999865

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.78  E-value=0.0055  Score=42.91  Aligned_cols=36  Identities=8%  Similarity=-0.039  Sum_probs=29.4

Q ss_pred             CCCCCCccccccchhccccc--ceEEEEecceEEEecC
Q psy12865        104 SGNTTDSDKASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       104 s~n~~ds~k~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      +........+..++.||.|.  +||++++||.|+||+.
T Consensus         6 ~~~~~~~~~~~~Alydy~a~~~~ELs~~~Gd~i~vl~~   43 (79)
T d1uhca_           6 SGSEAEGNQVYFAVYTFKARNPNELSVSANQKLKILEF   43 (79)
T ss_dssp             CCSSCCSSCCEEESSCBCCCSSSBCCBCTTCEEEEEES
T ss_pred             CCCCCCCCEEEEECccCCCCCCCCccCCCCCEEEEEEe
Confidence            33444455667799999998  9999999999999986

>d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Human (Homo sapiens), brain 2 isoform [TaxId: 9606]

Probab=94.63  E-value=0.029  Score=39.59  Aligned_cols=39  Identities=13%  Similarity=0.201  Sum_probs=29.8

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      ..+..|.|-....    ..|+|+|.|.+..+.|++.|+..+..
T Consensus        80 ~~~~~f~i~~~~~----~~~~l~a~s~~e~~~Wi~aI~~a~~~  118 (123)
T d1wjma_          80 KRKHVFKLGLQDG----KEYLFQAKDEAEMSSWLRVVNAAIAS  118 (123)
T ss_dssp             SCSSEEEEECSSS----CEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             ccCcEEEEEcCCC----cEEEEECCCHHHHHHHHHHHHHHHhc
Confidence            3445577665432    25999999999999999999988764

>d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Triple functional domain protein TRIO
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.44  E-value=0.017  Score=41.85  Aligned_cols=29  Identities=52%  Similarity=0.673  Sum_probs=25.3

Q ss_pred             CCCCccccccchHHHHHHHHHHHHHHHhh
Q psy12865        143 APPKSPASASSLEAKQLWVKRLREVIQET  171 (227)
Q Consensus       143 ~p~k~vlKass~e~Kq~WVk~iREViQE~  171 (227)
                      ++...++.|+|.+.|..|++.||++|+|+
T Consensus        92 ~~~~~~l~a~s~~eK~~W~~~I~~~i~eq  120 (121)
T d1ntya2          92 SDNKIVLKASSIENKQDWIKHIREVIQER  120 (121)
T ss_dssp             TTTCEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEECCCHHHHHHHHHHHHHHHHhh
Confidence            34446789999999999999999999987

>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho-GTPase-activating protein 25 (KIAA0053)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.05  E-value=0.064  Score=37.34  Aligned_cols=42  Identities=26%  Similarity=0.307  Sum_probs=31.7

Q ss_pred             CceeEEEecCCCC---CCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         19 DECKFAVWTGRAP---ISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        19 D~~kFeiW~~r~~---~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      .+..|.|+.....   .....|+|+|.+.+.++.|+..|++++..
T Consensus        69 ~~~~f~l~~~~~~~~~~~~~~~~~~a~s~ee~~~Wi~aI~~a~~~  113 (118)
T d1v89a_          69 GKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGS  113 (118)
T ss_dssp             CCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHHC
T ss_pred             CCcEEEEecCCCcceecCCcEEEEEcCCHHHHHHHHHHHHHHHcc
Confidence            3556888843321   23356999999999999999999999763

>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Tapp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.95  E-value=0.061  Score=36.44  Aligned_cols=39  Identities=21%  Similarity=0.284  Sum_probs=32.7

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      +....|.|-.+.     ..|.|+|.|.+..+.|+..|+..+..|
T Consensus        64 ~~~~~f~i~~~~-----~~~~~~a~s~~e~~~W~~aI~~ai~~~  102 (103)
T d1eaza_          64 MRDNLFEIVTTS-----RTFYVQADSPEEMHSWIKAVSGAIVAQ  102 (103)
T ss_dssp             TCSSEEEEECSS-----CEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred             ccceEEEEEeCC-----EEEEEEeCCHHHHHHHHHHHHHHHHHc
Confidence            556778888654     359999999999999999999998765

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.93  E-value=0.0067  Score=39.98  Aligned_cols=27  Identities=7%  Similarity=-0.215  Sum_probs=24.2

Q ss_pred             chhccccc--ceEEEEecceEEEecCCCC
Q psy12865        116 LEAKQLWV--KRLREVIQETYFSSALPLA  142 (227)
Q Consensus       116 v~~d~~a~--~elsv~~gqtve~le~~~~  142 (227)
                      ++.||.|.  +||++++|+.++||+...+
T Consensus         5 Alydy~a~~~~eLs~~~Gd~i~vl~~~~~   33 (57)
T d1opka1           5 ALYDFVASGDNTLSITKGEKLRVLGYNHN   33 (57)
T ss_dssp             ESSCBCCCSTTBCCBCTTCEEEEEEECTT
T ss_pred             ECccCCCCCcCCcCCCCCCEEEEeEecCC
Confidence            78999998  9999999999999997544

>d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Centaurin-delta 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.91  E-value=0.047  Score=37.78  Aligned_cols=40  Identities=18%  Similarity=0.335  Sum_probs=33.7

Q ss_pred             cCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         17 EGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        17 egD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ..++.+|+|-.+.     .+|.|+|.|.+..+.|+..|.+++..+
T Consensus        55 ~~~~~~f~i~~~~-----~~~~l~a~s~~e~~~Wi~ai~~~i~~~   94 (102)
T d2coda1          55 VQGDNKFEVVTTQ-----RTFVFRVEKEEERNDWISILLNALKSQ   94 (102)
T ss_dssp             EETTTEEEEEESS-----CCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             cccceeEEEEcCC-----cEEEEEeCCHHHHHHHHHHHHHHHHhC
Confidence            3467889997643     359999999999999999999998776

>d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dedicator of cytokinesis protein 9, DOCK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.68  E-value=0.065  Score=39.50  Aligned_cols=41  Identities=20%  Similarity=0.256  Sum_probs=31.7

Q ss_pred             cCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         17 EGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        17 egD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ...+..|.|-+...    ..|+|+|.|.+..+.|+..|++++...
T Consensus        86 ~~~~~~F~i~~~~~----~~~~l~A~s~~e~~~Wi~aL~~~i~~~  126 (150)
T d1wg7a_          86 KVRRFAFELKMQDK----SSYLLAADSEVEMEEWITILNKILQLN  126 (150)
T ss_dssp             SSCTTEEEEECSSS----CEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             cccceEEEEEcCCC----eEEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence            34456688864321    259999999999999999999998655

>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src-associated adaptor protein Skap2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.62  E-value=0.037  Score=38.42  Aligned_cols=38  Identities=21%  Similarity=0.424  Sum_probs=30.6

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      +-+..|.|-+...    ..|+|+|.|.+..+.|+..|+.+|+
T Consensus        74 ~~~~~f~i~~~~~----~~~~~~a~s~~e~~~W~~ai~~~i~  111 (111)
T d1u5fa1          74 KKDCCFEICAPDK----RIYQFTAASPKDAEEWVQQLKFILQ  111 (111)
T ss_dssp             TGGGEEEEECTTS----CEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred             cccceEEEEccCC----cEEEEEcCCHHHHHHHHHHHHHHhC
Confidence            3457888876442    2599999999999999999998863

>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: SH2 and PH domain-containing adapter protein APS
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.29  E-value=0.064  Score=39.36  Aligned_cols=38  Identities=13%  Similarity=0.319  Sum_probs=29.7

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      .+..|.|-+...    ..|.|||.|.+..+.||+.|++++..
T Consensus        94 ~~~~F~l~t~~~----~~y~f~A~s~~e~~~Wv~ai~~ai~~  131 (136)
T d1v5ma_          94 KDNTFVLKVENG----AEYILETIDSLQKHSWVADIQGCVDS  131 (136)
T ss_dssp             CTTEECCBCTTS----CBEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEEcCCC----cEEEEECCCHHHHHHHHHHHHHHHhc
Confidence            345688854332    13999999999999999999999764

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.26  E-value=0.012  Score=38.70  Aligned_cols=29  Identities=7%  Similarity=-0.254  Sum_probs=25.8

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ++..++.||.+.  +||++++||.|.|++..
T Consensus         2 ~~v~Alydy~~~~~~eLs~~~Gd~i~v~~~~   32 (57)
T d1ckaa_           2 EYVRALFDFNGNDEEDLPFKKGDILRIRDKP   32 (57)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEECS
T ss_pred             CEEEECCCCCcCCcCCcCCCCCCEEEEEEEc
Confidence            456799999998  99999999999999864

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.15  E-value=0.013  Score=38.12  Aligned_cols=26  Identities=12%  Similarity=-0.188  Sum_probs=23.4

Q ss_pred             chhccccc--ceEEEEecceEEEecCCC
Q psy12865        116 LEAKQLWV--KRLREVIQETYFSSALPL  141 (227)
Q Consensus       116 v~~d~~a~--~elsv~~gqtve~le~~~  141 (227)
                      |+.||.|.  +||++.+||.|.|++...
T Consensus         5 al~~y~a~~~~eLs~~~Gd~v~vl~~~~   32 (53)
T d1wlpb1           5 AIKAYTAVEGDEVSLLEGEAVEVIHKLL   32 (53)
T ss_dssp             ECSCBCCCSSSBCCBCTTCEEEEEECCT
T ss_pred             EeeeECCCCCCEecCCCCCEEEEEeecC
Confidence            78999998  999999999999998643

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.15  E-value=0.013  Score=38.58  Aligned_cols=27  Identities=4%  Similarity=-0.252  Sum_probs=24.1

Q ss_pred             cchhccccc--ceEEEEecceEEEecCCC
Q psy12865        115 SLEAKQLWV--KRLREVIQETYFSSALPL  141 (227)
Q Consensus       115 ~v~~d~~a~--~elsv~~gqtve~le~~~  141 (227)
                      .|+.||.+.  +||++++||.|+|++...
T Consensus         6 ~al~dy~~~~~~eLs~~~Gd~i~vl~~~~   34 (58)
T d1ng2a1           6 RAIADYEKTSGSEMALSTGDVVEVVEKSE   34 (58)
T ss_dssp             ECSSCBCCSSTTCCCBCTTCEEEEEECCT
T ss_pred             EECccCcCCCCCCcCCCCCCEEEEEEecC
Confidence            488999998  999999999999999653

>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phosphoinositol 3-phosphate binding protein-1, PEPP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.99  E-value=0.11  Score=35.21  Aligned_cols=36  Identities=22%  Similarity=0.350  Sum_probs=27.8

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHH
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREV   57 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Irei   57 (227)
                      +.+..|.|...+..    .|+|+|.|.+..++|+..|++.
T Consensus        70 ~~~~~~~i~~~~~~----~~~~~a~s~~e~~~Wi~al~~A  105 (107)
T d1upqa_          70 GRRFTFTAEHPGMR----TYVLAADTLEDLRGWLRALGRA  105 (107)
T ss_dssp             SSSSEEEEECTTSC----CEEEECSSHHHHHHHHHHHHHH
T ss_pred             CcceEEEEEcCCCe----EEEEEcCCHHHHHHHHHHHHHH
Confidence            34456777654432    4999999999999999999875

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.66  E-value=0.016  Score=42.59  Aligned_cols=27  Identities=11%  Similarity=-0.185  Sum_probs=24.6

Q ss_pred             chhccccc--ceEEEEecceEEEecCCCC
Q psy12865        116 LEAKQLWV--KRLREVIQETYFSSALPLA  142 (227)
Q Consensus       116 v~~d~~a~--~elsv~~gqtve~le~~~~  142 (227)
                      |+.||.|.  +||++.+||.|+||+...+
T Consensus        19 alydy~a~~~dELs~~~Gd~i~Vl~~~~~   47 (118)
T d1ng2a2          19 AIKAYTAVEGDEVSLLEGEAVEVIHKLLD   47 (118)
T ss_dssp             ESSCBCCCSTTBCCBCTTCEEEEEECCTT
T ss_pred             ECcCCCCCCCCEecCCCCCEEEEeEecCC
Confidence            99999998  9999999999999997543

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.56  E-value=0.021  Score=39.08  Aligned_cols=30  Identities=7%  Similarity=-0.097  Sum_probs=25.9

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALPL  141 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~~  141 (227)
                      ....|+.||.+.  +||++++||.|+||+...
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~   39 (74)
T d1wfwa_           8 STMTVIKDYYALKENEICVSQGEVVQVLAVNQ   39 (74)
T ss_dssp             CEEECCSCBCCCSSSCCCBCTTCEEEEEEECT
T ss_pred             CEEEEeEEECCCCCCCccCccCCEEEEEEEcC
Confidence            345599999998  999999999999998643

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.55  E-value=0.018  Score=37.43  Aligned_cols=27  Identities=7%  Similarity=-0.215  Sum_probs=24.1

Q ss_pred             chhccccc--ceEEEEecceEEEecCCCC
Q psy12865        116 LEAKQLWV--KRLREVIQETYFSSALPLA  142 (227)
Q Consensus       116 v~~d~~a~--~elsv~~gqtve~le~~~~  142 (227)
                      +++||.+.  +||++++||.+.|++...+
T Consensus         5 Al~dy~a~~~~eLs~~~Gd~i~v~~~~~~   33 (57)
T d1efna_           5 ALYDYEAITEDDLSFHKGEKFQILNSSEG   33 (57)
T ss_dssp             ESSCBCCSSTTBCCBCTTCEEEEEECSSC
T ss_pred             ECCCCCCCCcCCcCCCCCCEEEEEEecCC
Confidence            78999998  9999999999999987544

>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.40  E-value=0.097  Score=36.25  Aligned_cols=38  Identities=21%  Similarity=0.390  Sum_probs=29.1

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ...|.|=...    ...|.|+|.|.+.++.|+..|++.+..-
T Consensus        66 ~~~f~l~~~~----~~~~~~~a~s~~e~~~Wi~ai~~ai~~~  103 (113)
T d1plsa_          66 MFVFKITTTK----QQDHFFQAAFLEERDAWVRDINKAIKCI  103 (113)
T ss_dssp             SSEEEEEETT----TEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEecCC----CeEEEEECCCHHHHHHHHHHHHHHHHhC
Confidence            3456665432    2359999999999999999999987654

>d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rac-alpha serine/threonine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.38  E-value=0.093  Score=36.24  Aligned_cols=43  Identities=9%  Similarity=0.146  Sum_probs=32.2

Q ss_pred             cCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         17 EGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        17 egD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      .+.+.+|.|-.... .....|+|+|.|.+..+.|+..|+.++..
T Consensus        68 ~~~~~~f~i~~~~~-~~~~~~~f~a~s~~e~~~Wi~ai~~~~~~  110 (118)
T d1unqa_          68 RPRPNTFIIRCLQW-TTVIERTFHVETPEEREEWTTAIQTVADG  110 (118)
T ss_dssp             SSSTTEEEEEEEET-TEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             ccCCceEEEEeccc-cceeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence            45667898873221 12235899999999999999999998754

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

Probab=92.32  E-value=0.021  Score=37.65  Aligned_cols=30  Identities=7%  Similarity=-0.388  Sum_probs=26.2

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALPL  141 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~~  141 (227)
                      +...++.||.+.  +||++.+||.++|++...
T Consensus         3 ~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~   34 (58)
T d1sema_           3 KFVQALFDFNPQESGELAFKRGDVITLINKDD   34 (58)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEECSS
T ss_pred             EEEEECCCCCcCCcCCcCCCCCCEEEEeEEcC
Confidence            456689999998  999999999999999753

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

Probab=92.32  E-value=0.016  Score=37.49  Aligned_cols=25  Identities=12%  Similarity=-0.053  Sum_probs=22.6

Q ss_pred             chhccccc--ceEEEEecceEEEecCC
Q psy12865        116 LEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       116 v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ++.||.|.  .||++++||.+.|++..
T Consensus         3 Alydy~a~~~~eLs~~~Gd~~~vl~~~   29 (53)
T d2rn8a1           3 ALYDYQTNDPQELALRCDEEYYLLDSS   29 (53)
T ss_dssp             ESSCCCCSSTTBCCCCTTCEEEECCCS
T ss_pred             EeeeECCCCCCeeeECCCCEEEEeEEc
Confidence            67899997  89999999999999854

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.26  E-value=0.019  Score=39.11  Aligned_cols=32  Identities=19%  Similarity=-0.069  Sum_probs=27.6

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCCCCCCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALPLAAPP  145 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~~~~p~  145 (227)
                      ..++.||.+.  .||++++||.++|++...+.++
T Consensus         9 ~~Alydf~~~~~~eLs~~~Gd~i~vl~~~~~~~~   42 (71)
T d1u5sa1           9 VQTLYPFSSVTEEELNFEKGETMEVIEKPENDPE   42 (71)
T ss_dssp             EEESSCCCCCSSSBCCCCSSCCEEEEECCCTTTC
T ss_pred             EEECccCCCCCCCEeeECCCCEEEEEEcccCCCC
Confidence            4589999997  9999999999999998766554

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.13  E-value=0.019  Score=38.27  Aligned_cols=26  Identities=8%  Similarity=-0.363  Sum_probs=23.4

Q ss_pred             chhccccc--ceEEEEecceEEEecCCC
Q psy12865        116 LEAKQLWV--KRLREVIQETYFSSALPL  141 (227)
Q Consensus       116 v~~d~~a~--~elsv~~gqtve~le~~~  141 (227)
                      +++||.+.  +||++++||.+.|++...
T Consensus         7 Alydf~~~~~~eLs~~~Gd~i~v~~~~~   34 (64)
T d1fmka1           7 ALYDYESRTETDLSFKKGERLQIVNNTE   34 (64)
T ss_dssp             ESSCBCCCSSSBCCBCTTCEEEESCCCS
T ss_pred             ECccCCCcCcCCcCCCCCCEEEEEEEcC
Confidence            78999998  999999999999998653

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.13  E-value=0.021  Score=37.34  Aligned_cols=28  Identities=4%  Similarity=-0.428  Sum_probs=24.7

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALPL  141 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~~  141 (227)
                      ..++.||.+.  +||++.+||.|+|++...
T Consensus         4 v~Alydy~~~~~~eLs~~~Gd~i~v~~~~~   33 (56)
T d1gcqa_           4 VQALFDFDPQEDGELGFRRGDFIHVMDNSD   33 (56)
T ss_dssp             EEESSCBCCCSTTBCCBCTTCEEEEEECCS
T ss_pred             EEECcCCCcCCcCCcCCCCCCEEEEEEecC
Confidence            4589999998  899999999999998653

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.11  E-value=0.022  Score=37.45  Aligned_cols=29  Identities=7%  Similarity=-0.340  Sum_probs=25.2

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALPL  141 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~~  141 (227)
                      +..++.||.+.  +||++.+||.+.|++...
T Consensus         3 yarAlydy~~~~~~eLs~~~Gd~i~v~~~~~   33 (57)
T d1utia_           3 WARALYDFEALEEDELGFRSGEVVEVLDSSN   33 (57)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEECCS
T ss_pred             EEEECcCCCCCCcCCcCCCCCCEEEEeEEcC
Confidence            44589999998  899999999999998654

>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.02  E-value=0.12  Score=39.27  Aligned_cols=38  Identities=18%  Similarity=0.346  Sum_probs=31.5

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      .+..|.|=+..+     +|.|+|.|.+..+.||..|++++...
T Consensus        97 ~~~~F~I~t~~r-----t~~l~A~s~eE~~~WI~aL~~~i~~~  134 (169)
T d1btka_          97 FPYPFQVVYDEG-----PLYVFSPTEELRKRWIHQLKNVIRYN  134 (169)
T ss_dssp             CCEEEEEEETTC-----CEEEEESCHHHHHHHHHHHHHHHTTC
T ss_pred             cCcceEEEeCCc-----EEEEECCCHHHHHHHHHHHHHHHHhC
Confidence            457888876543     49999999999999999999998754

>d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1, STAP-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Signal-transducing adaptor protein 1, STAP-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.97  E-value=0.13  Score=37.62  Aligned_cols=39  Identities=21%  Similarity=0.293  Sum_probs=31.8

Q ss_pred             cCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         17 EGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        17 egD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      .+.+.+|.|-...+     +|+|+|.|.+..+.|+..|..++..
T Consensus        69 ~~~~~~F~i~~~~~-----~~~f~Aes~~e~~~Wi~~I~~v~~~  107 (136)
T d1x1fa1          69 EKNCAKFTLVLPKE-----EVQLKTENTESGEEWRGFILTVTEL  107 (136)
T ss_dssp             TSCCCEEEEECSSC-----CEEEECSSHHHHHHHHHHHHHHHHS
T ss_pred             ccccceeeecCCCc-----eEEEEeCCHHHHHHHHHHHHHHHhc
Confidence            34567899876542     5999999999999999999998753

>d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Mouse (Mus musculus), brain [TaxId: 10090]

Probab=91.95  E-value=0.13  Score=35.07  Aligned_cols=35  Identities=14%  Similarity=0.294  Sum_probs=26.8

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHH
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLRE   56 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Ire   56 (227)
                      ..+..|.|-....    ..|+|+|.|.+..+.|+..|..
T Consensus        71 ~~~~~f~i~~~~~----~~~~~~a~s~~e~~~W~~ai~~  105 (106)
T d1btna_          71 KKKHVFKLRLSDG----NEYLFQAKDDEEMNTWIQAISS  105 (106)
T ss_dssp             SSSSEEEEECTTS----CEEEEECSSHHHHHHHHHHHHH
T ss_pred             cCcceEeecccCC----CEEEEECCCHHHHHHHHHHHHh
Confidence            3445688775432    2599999999999999999863

>d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Calcium-dependent activator protein for secretion, CAPS
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.81  E-value=0.3  Score=34.25  Aligned_cols=35  Identities=11%  Similarity=0.269  Sum_probs=27.0

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      .+.|.|-...     .+|.|+|.|.+.++.|+..|.+.+.
T Consensus        76 ~~~~~i~~~~-----r~~~f~A~s~~e~~~Wv~al~~a~~  110 (126)
T d1wi1a_          76 RAFFNAVKEG-----DTVIFASDDEQDRILWVQAMYRATG  110 (126)
T ss_dssp             SSEEEEECSS-----CEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred             ceeEEeccCC-----eEEEEEECCHHHHHHHHHHHHHHHH
Confidence            4445555433     2599999999999999999998764

>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.79  E-value=0.11  Score=35.82  Aligned_cols=39  Identities=15%  Similarity=0.245  Sum_probs=30.6

Q ss_pred             cCCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865         17 EGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus        17 egD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      .+.+..|+|-...    ...|+|+|.+.+..+.|+..|+..+.
T Consensus        65 ~~~~~~F~i~~~~----~~~~~f~a~s~~~~~~Wi~ai~~a~~  103 (109)
T d1wgqa_          65 NSESKVFQLLHKG----MVFYVFKADDAHSTQRWIDAFQEGTV  103 (109)
T ss_dssp             SCSSSEEEEEETT----EEEEEEECSSHHHHHHHHHHHHHHHS
T ss_pred             cccceeeeeeccc----ceEEEEECCCHHHHHHHHHHHHHHhc
Confidence            3456778886532    23599999999999999999998864

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.64  E-value=0.031  Score=38.49  Aligned_cols=29  Identities=3%  Similarity=-0.067  Sum_probs=25.6

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      .+.+++.||.+.  +||++++||.|.|++..
T Consensus        11 ~~~rAlydy~a~~~~eLs~~~Gd~i~v~~~~   41 (76)
T d1ujya_          11 LIVKARFNFKQTNEDELSVCKGDIIYVTRVE   41 (76)
T ss_dssp             EEEECCSCBCCSSTTSCCBCSSCCEEESSCC
T ss_pred             EEEEECccCCCCCCCCccCCCCCEEEEeEEc
Confidence            356799999998  99999999999999864

>d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=91.61  E-value=0.29  Score=34.42  Aligned_cols=40  Identities=18%  Similarity=0.223  Sum_probs=30.6

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      .....|.|-+...    .+|+|+|.|.+..+.|+..|+..+.+.
T Consensus        66 ~~~~~f~i~~~~~----~~~~f~a~s~~e~~~W~~al~~a~~~~  105 (119)
T d1omwa2          66 KERKCLLLKIRGG----KQFVLQCDSDPELVQWKKELRDAYREA  105 (119)
T ss_dssp             SSCEEEEEEETTS----CEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             cccceEEEEcCCC----cEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence            3445577764332    359999999999999999999987765

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.59  E-value=0.026  Score=37.20  Aligned_cols=28  Identities=11%  Similarity=-0.328  Sum_probs=24.9

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALPL  141 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~~  141 (227)
                      ..++.||.+.  +||++.+||.+.|++...
T Consensus         5 ~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~   34 (58)
T d1uj0a_           5 VRALYDFEAVEDNELTFKHGELITVLDDSD   34 (58)
T ss_dssp             EEESSCBCCCSTTBCCBCTTCEEEEEECCS
T ss_pred             EEECCCCCCCCcCCcCCCCCCEEEEeEEeC
Confidence            4588999998  999999999999999754

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.45  E-value=0.035  Score=38.18  Aligned_cols=29  Identities=3%  Similarity=-0.196  Sum_probs=25.4

Q ss_pred             cccccchhccccc--ceEEEEecceEEEecC
Q psy12865        111 DKASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       111 ~k~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      .....++.||.+.  +||++++|+.|+||+.
T Consensus        10 ~~~~~alydy~a~~~~ELs~~~Gd~i~vl~~   40 (74)
T d1j3ta_          10 NLKAQALCSWTAKKDNHLNFSKHDIITVLEQ   40 (74)
T ss_dssp             CCEEEESSCBCCCSTTBCCBCTTCEEEEEEE
T ss_pred             CeEEEEccCCCCCCCCEecCCCCCEEEEEEc
Confidence            3445699999998  8999999999999985

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.43  E-value=0.029  Score=37.34  Aligned_cols=30  Identities=3%  Similarity=-0.269  Sum_probs=25.8

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALPL  141 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~~  141 (227)
                      ....++.||.+.  +||++.+||.|+|++...
T Consensus         6 ~~v~Aly~y~a~~~~eLsf~~Gd~i~vl~~~~   37 (62)
T d1k4us_           6 SQVEALFSYEATQPEDLEFQEGDIILVLSKVN   37 (62)
T ss_dssp             EEEECCSCBCCCSSSBCCBCSSCEEEEEEESS
T ss_pred             CEEEECCCCCCCCcCCcCCCCCCEEEEeEEcC
Confidence            345589999998  999999999999998753

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.35  E-value=0.024  Score=36.66  Aligned_cols=26  Identities=4%  Similarity=-0.188  Sum_probs=23.7

Q ss_pred             cchhccccc--ceEEEEecceEEEecCC
Q psy12865        115 SLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       115 ~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      +|+.||.|.  +||++++|+.+.|++..
T Consensus         3 ralydf~a~~~~ELs~~~Gd~i~v~~~~   30 (56)
T d1zuua1           3 KVLYAYVQKDDDEITITPGDKISLVARD   30 (56)
T ss_dssp             EECSCBCCCSTTBCCBCTTCCEEEEECC
T ss_pred             EEeeeeCCCCCCEeeECCCCEEEEEEEe
Confidence            489999998  89999999999999864

>d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: FYVE, RhoGEF and PH domain containing protein 3, FGD3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.33  E-value=0.17  Score=33.84  Aligned_cols=34  Identities=24%  Similarity=0.294  Sum_probs=26.5

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHH
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREV   57 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Irei   57 (227)
                      .+..|.|=.+.     .+|.|+|.|.+..+.|+..|+..
T Consensus        64 ~~~~F~i~~~~-----r~~~l~A~s~~e~~~Wi~aL~~A   97 (99)
T d2coca1          64 SGHVWKLQWAK-----QSWYLSASSAELQQQWLETLSTA   97 (99)
T ss_dssp             SSEEEEEEETT-----EEEEEEESSHHHHHHHHHHHHHH
T ss_pred             CceEEEEEcCC-----cEEEEECCCHHHHHHHHHHHHHh
Confidence            34557775433     36999999999999999999864

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.28  E-value=0.029  Score=36.84  Aligned_cols=27  Identities=4%  Similarity=-0.419  Sum_probs=24.2

Q ss_pred             cchhccccc--ceEEEEecceEEEecCCC
Q psy12865        115 SLEAKQLWV--KRLREVIQETYFSSALPL  141 (227)
Q Consensus       115 ~v~~d~~a~--~elsv~~gqtve~le~~~  141 (227)
                      .++.||.|.  +||++.+||.|.|++...
T Consensus         5 ~Alydy~a~~~~ELs~~~Gd~v~vl~~~~   33 (58)
T d1oota_           5 VALYSFAGEESGDLPFRKGDVITILKKSD   33 (58)
T ss_dssp             EESSCBCCCSTTBCCBCTTCEEEEEECCS
T ss_pred             EEccCCCCCCCCCccCCCCCEEEEEEeec
Confidence            478999998  899999999999998754

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.27  E-value=0.022  Score=37.50  Aligned_cols=27  Identities=4%  Similarity=-0.202  Sum_probs=24.1

Q ss_pred             cccchhccccc--ceEEEEecceEEEecC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ...|+.||.|.  +||++++||.+.|++.
T Consensus         3 ~a~alydf~a~~~~ELs~~~Gd~i~v~~~   31 (59)
T d1i07a_           3 YAKSKYDFVARNSSELSVMKDDVLEILDD   31 (59)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEECGG
T ss_pred             EEEEccCCCCCCCCeeeEcCCCEEEEEEE
Confidence            44589999998  9999999999999985

>d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho guanine nucleotide exchange factor 12
species: Human (Homo sapiens), gamma isoform [TaxId: 9606]

Probab=91.14  E-value=0.05  Score=39.35  Aligned_cols=27  Identities=11%  Similarity=0.219  Sum_probs=22.3

Q ss_pred             CCCCccccccchHHHHHHHHHHHHHHH
Q psy12865        143 APPKSPASASSLEAKQLWVKRLREVIQ  169 (227)
Q Consensus       143 ~p~k~vlKass~e~Kq~WVk~iREViQ  169 (227)
                      .+.--.|.|+|.|.|+.|+++|++.+.
T Consensus        87 ~~~~y~l~A~s~~eK~~W~~~I~~~~~  113 (114)
T d1txda2          87 GAQIYELVAQTVSEKTVWQDLICRMAA  113 (114)
T ss_dssp             CEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEEcCCHHHHHHHHHHHHHHhc
Confidence            333457789999999999999999864

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.11  E-value=0.016  Score=38.29  Aligned_cols=30  Identities=3%  Similarity=-0.177  Sum_probs=26.0

Q ss_pred             cccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        111 DKASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       111 ~k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      .+..+++.||.|.  +||++.+||.++|++..
T Consensus         3 G~~~rAl~df~~~~~~eLs~~~Gd~i~v~~~~   34 (60)
T d1arka_           3 GKIFRAMYDYMAADADEVSFKDGDAIINVQAI   34 (60)
T ss_dssp             CCCEECCSCCCCSSSSBCCCCTTCEECCSEEC
T ss_pred             CcEEEECccCCCCCCCCcCCCCCCEEEEEEEc
Confidence            4556699999998  99999999999999864

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.94  E-value=0.029  Score=38.14  Aligned_cols=27  Identities=7%  Similarity=-0.149  Sum_probs=24.0

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.+.  +||++++|+.|.||+..
T Consensus         9 ~~Alydy~a~~~~ELs~~~Gd~i~vl~~~   37 (71)
T d1k9aa1           9 CIAKYNFHGTAEQDLPFCKGDVLTIVAVT   37 (71)
T ss_dssp             EEESSCBCCSSSSBCCBCTTCEEEEEEEC
T ss_pred             EEEccCCCCCCCCCccCCCCCEEEEeEec
Confidence            3489999998  99999999999999864

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=90.93  E-value=0.034  Score=36.14  Aligned_cols=28  Identities=0%  Similarity=-0.351  Sum_probs=24.3

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALPL  141 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~~  141 (227)
                      .-++.||.|.  +||++++||.|.|++...
T Consensus         3 ~vAl~dy~~~~~~eLs~~~Gd~v~v~~~~~   32 (55)
T d1u06a1           3 VLALYDYQEKSPREVTMKKGDILTLLNSTN   32 (55)
T ss_dssp             EEECSCBCCCSTTBCCBCTTCEEEEEECCS
T ss_pred             EEECCCCCCCCcCCccCCCCCEEEEeEEcC
Confidence            3478899998  999999999999998753

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.60  E-value=0.04  Score=37.86  Aligned_cols=29  Identities=3%  Similarity=-0.064  Sum_probs=25.7

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      +...|+.||.+.  +||++.+||.|.|++..
T Consensus         8 ~~~~al~~y~~~~~~eLs~~~Gd~i~Vl~~~   38 (80)
T d1ue9a_           8 EIAQVTSAYVASGSEQLSLAPGQLILILKKN   38 (80)
T ss_dssp             EEEEECSCCCCCSTTBCCCCTTCEEEEEEEC
T ss_pred             CEEEECcCCCCCCCCEeeEcCCCEEEEEEEe
Confidence            455699999998  99999999999999864

>d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: KIAA1914
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.60  E-value=0.13  Score=34.79  Aligned_cols=35  Identities=20%  Similarity=0.149  Sum_probs=26.3

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHH
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREV   57 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Irei   57 (227)
                      .++.|.|-....    ..|.|+|.|.+..+.|+.-|+..
T Consensus        58 ~~~~f~~~~~~~----~~~~l~A~s~~e~~~Wi~~L~~~   92 (95)
T d2cofa1          58 HLYSFRILHKGE----ELAKLEAKSSEEMGHWLGLLLSE   92 (95)
T ss_dssp             BSCEEEEEETTE----EEEEEECSSHHHHHHHHHHHHHH
T ss_pred             ceecceeccccc----eeEEeeCCCHHHHHHHHHHHHHH
Confidence            455666654332    35999999999999999998753

>d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.43  E-value=0.14  Score=37.57  Aligned_cols=37  Identities=22%  Similarity=0.434  Sum_probs=28.6

Q ss_pred             EEEecCCCCCCCCc-cccccchHHHHHHHHHHHHHHHh
Q psy12865        134 YFSSALPLAAPPKS-PASASSLEAKQLWVKRLREVIQE  170 (227)
Q Consensus       134 ve~le~~~~~p~k~-vlKass~e~Kq~WVk~iREViQE  170 (227)
                      .+|+.....+++++ +|.|+|.+-|..|++.|++.|++
T Consensus       102 f~li~~~~~~~~~~~~l~A~s~~eK~~Wi~~i~~aI~n  139 (140)
T d1xcga2         102 FFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN  139 (140)
T ss_dssp             EEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCCCCceEEEEEcCCHHHHHHHHHHHHHHHHc
Confidence            45555555555544 56899999999999999999975

>d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho GTPase-activating protein 21
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.39  E-value=0.24  Score=35.48  Aligned_cols=35  Identities=23%  Similarity=0.453  Sum_probs=27.9

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHH
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVI   58 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL   58 (227)
                      -+..|.|-...     .+|+|||.|.+..+.|+..|....
T Consensus        74 r~~~F~i~~~~-----~~~~f~A~s~~e~~~Wi~ai~~a~  108 (133)
T d2j59m1          74 RKNVFRLTTSD-----CECLFQAEDRDDMLAWIKTIQESS  108 (133)
T ss_dssp             CSSEEEEECSS-----CEEEEECSSHHHHHHHHHHHHHHC
T ss_pred             cCceeEEecCC-----CEEEEEeCCHHHHHHHHHHHHHHH
Confidence            44458887533     359999999999999999998764

>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.39  E-value=0.029  Score=40.15  Aligned_cols=29  Identities=7%  Similarity=-0.228  Sum_probs=25.7

Q ss_pred             cccccchhccccc--ceEEEEecceEEEecC
Q psy12865        111 DKASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       111 ~k~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      .++..|++||.|.  +||++++||.|.||+.
T Consensus        17 ~~~~~a~~~f~a~~~~eLs~~~Gd~v~vl~~   47 (92)
T d1ug1a_          17 EKLFQAERNFNAAQDLDVSLLEGDLVGVIKK   47 (92)
T ss_dssp             GGEEEESSCCCCCSSSCCCCCTTCEEEEEES
T ss_pred             CeEEEEcCCcCCCCCCeEEEecccEEEEEEc
Confidence            3455699999998  9999999999999996

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.29  E-value=0.042  Score=35.86  Aligned_cols=27  Identities=11%  Similarity=-0.073  Sum_probs=24.0

Q ss_pred             cchhccccc--ceEEEEecceEEEecCCC
Q psy12865        115 SLEAKQLWV--KRLREVIQETYFSSALPL  141 (227)
Q Consensus       115 ~v~~d~~a~--~elsv~~gqtve~le~~~  141 (227)
                      .|+.||.+.  +||++.+||.+.|++...
T Consensus         4 ~Alydy~~~~~~eLs~~~Gd~i~v~~~~~   32 (58)
T d1jo8a_           4 TAEYDYDAAEDNELTFVENDKIINIEFVD   32 (58)
T ss_dssp             EESSCBCCCSTTBCCBCTTCEEEEEECCS
T ss_pred             EEccCCCCCCcCCcCCCCCCEEEEEEEcC
Confidence            478999998  999999999999998644

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.18  E-value=0.047  Score=36.42  Aligned_cols=28  Identities=4%  Similarity=-0.430  Sum_probs=24.5

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALPL  141 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~~  141 (227)
                      +.++.||.|.  +||++++||.+.|++...
T Consensus         7 v~Alydy~a~~~~ELs~~~Gd~i~vl~~~~   36 (63)
T d1ycsb2           7 IYALWDYEPQNDDELPMKEGDCMTIIHRED   36 (63)
T ss_dssp             EEESSCBCCSSTTBCCBCSSCEEEECCCCT
T ss_pred             EEEeeCCCCCCCCCcCCCCCCEEEEEEecC
Confidence            3479999998  999999999999998754

>d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Tapp2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.94  E-value=0.24  Score=34.90  Aligned_cols=34  Identities=21%  Similarity=0.282  Sum_probs=26.4

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHH
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVI   58 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL   58 (227)
                      .+.|.+-...     ..|.|+|.|.+..+.|+..|++.+
T Consensus        86 ~~~~~~~~~~-----r~~~l~Aes~~e~~~Wi~aL~~A~  119 (126)
T d1v5pa_          86 PFCFVINALS-----QRYFLQANDQKDLKDWVEALNQAS  119 (126)
T ss_dssp             SSEEEEECSS-----CEEEEECSSHHHHHHHHHHHHHTT
T ss_pred             cceEEEcCCC-----eeEEEECCCHHHHHHHHHHHHHHh
Confidence            4556554433     359999999999999999999763

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.26  E-value=0.058  Score=35.45  Aligned_cols=29  Identities=7%  Similarity=-0.346  Sum_probs=25.2

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      +..-++.||.+.  +||++++|+.|.|++..
T Consensus         7 ~~~~al~dy~a~~~~eLs~~~Gd~i~v~~~~   37 (62)
T d2iima1           7 NLVIALHSYEPSHDGDLGFEKGEQLRILEQS   37 (62)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEECC
T ss_pred             cEEEECCCCCcCCcCCcCCCCCCEEEEeEEc
Confidence            345589999998  99999999999999863

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.24  E-value=0.04  Score=37.55  Aligned_cols=26  Identities=12%  Similarity=-0.207  Sum_probs=23.3

Q ss_pred             ccchhccccc--ceEEEEecceEEEecC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      .-++.||++.  +||++++||.|+|++.
T Consensus        11 ~vAl~~y~~~~~~eLs~~~Gd~v~vl~~   38 (69)
T d1uhfa_          11 YIALYPYSSVEPGDLTFTEGEEILVTQK   38 (69)
T ss_dssp             EECSSCBCCSSSSBCCBCTTCEEEECEE
T ss_pred             EEECccCCCCCcCCcCCCCCCEEEEEEe
Confidence            3489999998  9999999999999975

>d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Protein kinase c, d2 type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.21  E-value=0.21  Score=35.12  Aligned_cols=37  Identities=19%  Similarity=0.330  Sum_probs=28.2

Q ss_pred             CCceeEEEecCCCCCCCceEEEEc-----------CCHHHHHHHHHHHHHHHH
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKA-----------SSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQA-----------ss~evK~~Wvk~IreiL~   59 (227)
                      +.++.|+|-+..+     +|-|+|           .+.+..+.|+..|++.|+
T Consensus        65 ~~~~~F~I~T~~r-----tyy~~~~~~~~~~~~s~~~~~~~~~W~~aI~~A~~  112 (112)
T d2coaa1          65 TNPHCFEIVTANA-----TYFVGEMPGGTPGGPSGQGAEAARGWETAIRQALM  112 (112)
T ss_dssp             SCCEEEEEECSSC-----CCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHGG
T ss_pred             CCccEEEEEeCCe-----EEEEecCCccccccccccChHHHHHHHHHHHHhhC
Confidence            3667899986554     366655           678899999999999764

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.05  E-value=0.051  Score=38.02  Aligned_cols=29  Identities=0%  Similarity=-0.281  Sum_probs=25.4

Q ss_pred             cchhccccc--ceEEEEecceEEEecCCCCC
Q psy12865        115 SLEAKQLWV--KRLREVIQETYFSSALPLAA  143 (227)
Q Consensus       115 ~v~~d~~a~--~elsv~~gqtve~le~~~~~  143 (227)
                      +++.||.+.  +||++++||.|+||+...+.
T Consensus         9 rAlydy~~~~~~ELs~~~Gd~v~Vl~~~~~~   39 (93)
T d1uffa_           9 RALYPFEARNHDEMSFNSGDIIQVDEKTVGE   39 (93)
T ss_dssp             EESSCBCCCSSSCCCBCTTCEEEECSSCCCS
T ss_pred             EECccCCCCCCCCccCcCCCEEEEEEeccCC
Confidence            599999998  89999999999999876443

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.02  E-value=0.045  Score=36.34  Aligned_cols=24  Identities=4%  Similarity=-0.244  Sum_probs=22.2

Q ss_pred             chhccccc--ceEEEEecceEEEecC
Q psy12865        116 LEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       116 v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ++.||.+.  +||++++||.+.|++.
T Consensus         9 Alydy~~~~~~eLs~~~Gd~i~v~~~   34 (65)
T d1qcfa1           9 ALYDYEAIHHEDLSFQKGDQMVVLEE   34 (65)
T ss_dssp             ESSCBCCCSTTBCCBCTTCEEEEEEC
T ss_pred             ECCcCCCCCcCccCCCCCCEEEEEEE
Confidence            68999998  8999999999999984

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.94  E-value=0.036  Score=36.11  Aligned_cols=25  Identities=4%  Similarity=-0.292  Sum_probs=19.8

Q ss_pred             chhccccc--ceEEEEecceEEEecCC
Q psy12865        116 LEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       116 v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ++.||.+.  +||++++||.|.|++..
T Consensus         5 Alydy~a~~~~ELs~~~Gd~v~v~~~~   31 (56)
T d1gria1           5 AKYDFKATADDELSFKRGDILKVLNEE   31 (56)
T ss_dssp             ECSCBCCCSSSCCCBCTTCEEEC----
T ss_pred             EeeCCCCCCCCCcCCCCCCEEEEEecc
Confidence            78899998  99999999999999753

>d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: DCC-interacting protein 13-alpha, APPL1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.85  E-value=0.14  Score=35.30  Aligned_cols=35  Identities=14%  Similarity=0.273  Sum_probs=27.1

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHH
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREV   57 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~Irei   57 (227)
                      ...|+|-....   ...|+|||.|.+..+.|+..|+.|
T Consensus        66 ~~~f~i~~~~~---~~~~~l~A~s~~e~~~Wi~al~~v  100 (101)
T d2elba2          66 RYCFQITSFDG---KKSSILQAESKKDHEEWICTINNI  100 (101)
T ss_dssp             SSSSEECCCSS---SCCCCEECSSHHHHHHHHHHHHHT
T ss_pred             cceEEEEeecc---cceEEEECCCHHHHHHHHHHHHhc
Confidence            44588875432   235999999999999999999864

>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=88.84  E-value=0.29  Score=34.20  Aligned_cols=36  Identities=19%  Similarity=0.242  Sum_probs=27.2

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      +..|.|=....    ..|.|||.|.+..+.|+..|+.+..
T Consensus        84 ~~~~~l~~~~~----~~~~f~a~s~~d~~~Wv~al~~~~~  119 (122)
T d1droa_          84 KHVLRVKLANG----ALFLLQAHDDTEMSQWVTSLKAQSD  119 (122)
T ss_dssp             TTEEEEECSSS----CEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred             cceEEEECCCC----cEEEEECCCHHHHHHHHHHHHHHHh
Confidence            44455554322    3599999999999999999998864

>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.70  E-value=0.36  Score=32.14  Aligned_cols=24  Identities=17%  Similarity=0.441  Sum_probs=21.5

Q ss_pred             ceEEEEcCCHHHHHHHHHHHHHHH
Q psy12865         35 CRILLKASSLEAKQLWVKRLREVI   58 (227)
Q Consensus        35 ~~~iLQAss~evK~~Wvk~IreiL   58 (227)
                      ..|.|+|.|.+..+.|+..|+..+
T Consensus        80 ~~~~~~a~s~~e~~~W~~ai~~a~  103 (104)
T d2i5fa1          80 VHYFLQAATPKERTEWIKAIQMAS  103 (104)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             eEEEEEcCCHHHHHHHHHHHHHHh
Confidence            359999999999999999998764

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.62  E-value=0.059  Score=36.70  Aligned_cols=29  Identities=3%  Similarity=-0.190  Sum_probs=25.1

Q ss_pred             ccccchhccccc--ceEEEEecceEEEecCC
Q psy12865        112 KASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       112 k~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      +...++.||.+.  +||++++||.|.|++..
T Consensus        11 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~   41 (72)
T d1ugva_          11 RKAKALYACKAEHDSELSFTAGTVFDNVHPS   41 (72)
T ss_dssp             CCEEESSCBCCCSSSBCCBCTTCEEBSCCBC
T ss_pred             EEEEEcccCCCCCCCEecCCCCCEEEEeecc
Confidence            345699999998  89999999999999863

>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Grp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.98  E-value=0.3  Score=33.91  Aligned_cols=28  Identities=25%  Similarity=0.414  Sum_probs=25.0

Q ss_pred             CceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         34 DCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        34 ~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      ...|.|+|.|.+.++.|+..|+.++..+
T Consensus        95 ~~~~~f~a~s~~e~~~Wi~aL~~~i~~~  122 (127)
T d1fgya_          95 HVVYRISAPSPEEKEEWMKSIKASISRD  122 (127)
T ss_dssp             CSEEEEECSSHHHHHHHHHHHHHHHHHC
T ss_pred             CeEEEEECCCHHHHHHHHHHHHHHHccC
Confidence            3469999999999999999999998766

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.89  E-value=0.078  Score=35.51  Aligned_cols=26  Identities=12%  Similarity=-0.013  Sum_probs=23.1

Q ss_pred             ccchhccccc--ceEEEEecceEEEecC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      +.++.||.|.  +||++++|+.+.|++.
T Consensus        11 v~Alydy~a~~~~eLs~~~Gd~i~v~~~   38 (67)
T d1awwa_          11 VVALYDYMPMNANDLQLRKGDEYFILEE   38 (67)
T ss_dssp             EEBSSCCCCSSSSSCCCCSSCEEECCCC
T ss_pred             EEECcCCCCCCcCCcCCCCCCEEEEEEE
Confidence            3478899998  8999999999999975

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.58  E-value=0.091  Score=35.17  Aligned_cols=27  Identities=11%  Similarity=-0.123  Sum_probs=24.2

Q ss_pred             cccchhccccc--ceEEEEecceEEEecC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSAL  139 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~  139 (227)
                      ++-++.||.|.  +||++++||.|.|++.
T Consensus         4 ~v~Alydf~a~~~~eLs~~~Gd~i~v~~~   32 (67)
T d1gl5a_           4 IVVAMYDFQATEAHDLRLERGQEYIILEK   32 (67)
T ss_dssp             CEEECSCBCCSSSSBCCBCTTCEEEEEEC
T ss_pred             EEEECCCCCCCCcCCcCCCCCCEEEEEEe
Confidence            45589999998  9999999999999986

>d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.35  E-value=0.27  Score=34.55  Aligned_cols=24  Identities=17%  Similarity=0.488  Sum_probs=21.8

Q ss_pred             EEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         37 ILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        37 ~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      |+|+|.|.+..+.|+..|+.++..
T Consensus       102 ~~l~A~s~~e~~~Wi~al~~~i~~  125 (130)
T d1v88a_         102 LIIRATSESDGRCWMDALELALKS  125 (130)
T ss_dssp             CEEECSSHHHHHHHHHHHHHHHTT
T ss_pred             EEEECCCHHHHHHHHHHHHHHhhc
Confidence            789999999999999999998753

>d1foea2 b.55.1.1 (A:1240-1401) GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.21  E-value=0.51  Score=37.39  Aligned_cols=61  Identities=13%  Similarity=0.159  Sum_probs=47.3

Q ss_pred             CCCccccccccceeeccC---CceeEEEecCC---CCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865          1 MKGRLMTSELGVTEHIEG---DECKFAVWTGR---APISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus         1 yK~slk~s~lGltE~Veg---D~~kFeiW~~r---~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      |+..|-+++|-|.++--.   ..|-|||-+-+   ....+..|.|-.+++|.|...++-||+||-+-
T Consensus        92 Fr~mIP~~alQVR~~~~~~~es~~vwEiiH~kSe~egRpE~vfqlc~St~E~K~~flK~Ir~ilre~  158 (162)
T d1foea2          92 FRHMIPTEALQVRALPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDK  158 (162)
T ss_dssp             CEEEEEGGGEEEECCCCTTTTSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeeeeeeEeecccccCCCcceEEEEEeecccccCCcceEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence            566778889988887633   57888887533   11235679999999999999999999999764

>d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rac/CDC42 GEF 6, alpha-pix
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.87  E-value=0.13  Score=37.72  Aligned_cols=26  Identities=12%  Similarity=0.275  Sum_probs=23.7

Q ss_pred             CccccccchHHHHHHHHHHHHHHHhh
Q psy12865        146 KSPASASSLEAKQLWVKRLREVIQET  171 (227)
Q Consensus       146 k~vlKass~e~Kq~WVk~iREViQE~  171 (227)
                      ..++.|.+.+-|+.||++|.++|++.
T Consensus       103 ~~~l~a~s~eek~~Wv~~L~~~i~~~  128 (132)
T d1v61a_         103 RIVVHCNNNQDFQEWMEQLNRLTKSG  128 (132)
T ss_dssp             EEEECCCCSHHHHHHHHHHHHHHTTS
T ss_pred             EEEEEcCCHHHHHHHHHHHHHHHhcC
Confidence            47789999999999999999999876

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.61  E-value=0.083  Score=37.50  Aligned_cols=28  Identities=4%  Similarity=-0.339  Sum_probs=24.4

Q ss_pred             cccchhccccc--ceEEEEecceEEEecCC
Q psy12865        113 ASSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       113 ~~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ...++.||.+.  +||++++||.|+||+..
T Consensus        36 ~~~Alydy~a~~~~ELsf~~Gd~i~Vl~~~   65 (98)
T d1udla_          36 QVIAMYDYAANNEDELSFSKGQLINVMNKD   65 (98)
T ss_dssp             EEEESSCCCCSSTTSCCCCTTCEEEECBCC
T ss_pred             EEEEccCCCCCCCCEeeEcCCCEEEEeEec
Confidence            34588999998  89999999999999864

>d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dbl's big sister, Dbs
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.53  E-value=0.19  Score=37.77  Aligned_cols=26  Identities=27%  Similarity=0.420  Sum_probs=23.5

Q ss_pred             CccccccchHHHHHHHHHHHHHHHhh
Q psy12865        146 KSPASASSLEAKQLWVKRLREVIQET  171 (227)
Q Consensus       146 k~vlKass~e~Kq~WVk~iREViQE~  171 (227)
                      ..+|.|++.|-|+.|++.|+++|.+.
T Consensus       105 ~~~l~a~s~eeK~~W~~~I~~~l~~q  130 (147)
T d1kz7a2         105 VYIIQAPTPEIKAAWVNAIRKVLTSQ  130 (147)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence            46778999999999999999999777

>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: SET binding factor 1, Sbf1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.88  E-value=0.23  Score=34.10  Aligned_cols=23  Identities=22%  Similarity=0.433  Sum_probs=21.2

Q ss_pred             eEEEEcCCHHHHHHHHHHHHHHH
Q psy12865         36 RILLKASSLEAKQLWVKRLREVI   58 (227)
Q Consensus        36 ~~iLQAss~evK~~Wvk~IreiL   58 (227)
                      .|.|+|.|.+.++.||..|+.++
T Consensus        88 ~~~~~a~s~~e~~~Wv~~l~~ai  110 (117)
T d1v5ua_          88 VYNFCAQDVPSAQQWVDRIQSCL  110 (117)
T ss_dssp             EEEEECSSHHHHHHHHHHHHTTC
T ss_pred             EEEEEeCCHHHHHHHHHHHHHHH
Confidence            59999999999999999998764

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.02  E-value=0.19  Score=34.05  Aligned_cols=30  Identities=7%  Similarity=-0.254  Sum_probs=24.9

Q ss_pred             ccccccchhccccc---ceEEEEecceEEEecC
Q psy12865        110 SDKASSLEAKQLWV---KRLREVIQETYFSSAL  139 (227)
Q Consensus       110 s~k~~~v~~d~~a~---~elsv~~gqtve~le~  139 (227)
                      +.+...++.||.+.   +||++.+||.++||+.
T Consensus         6 ~~~~~~Alydy~~~~~~deLsf~~Gd~i~vl~~   38 (72)
T d1spka_           6 SGQKVKTIFPHTAGNNKTLLSFAQGDVLTLLIP   38 (72)
T ss_dssp             CSCEEECSSCBCCSSCSSBCCBCTTCEEEECCS
T ss_pred             CCCEEEEeeccCCCCCCCEeeEcCCCEEEEEEe
Confidence            34556799999985   6899999999999964

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.40  E-value=0.13  Score=34.39  Aligned_cols=27  Identities=0%  Similarity=-0.344  Sum_probs=23.4

Q ss_pred             cccchhccccc---ceEEEEecceEEEecC
Q psy12865        113 ASSLEAKQLWV---KRLREVIQETYFSSAL  139 (227)
Q Consensus       113 ~~~v~~d~~a~---~elsv~~gqtve~le~  139 (227)
                      +..++.||.|.   +||++++||.+.||+.
T Consensus         7 ~~~Alydy~~~~~~~ELs~~~Gd~i~vl~~   36 (67)
T d2v1ra1           7 FARALYDFVPENPEMEVALKKGDLMAILSK   36 (67)
T ss_dssp             EEEESSCBCCSSTTTBCCBCTTCEEEEEEE
T ss_pred             EEEECccCCCCCCCCEeCCCCCCEEEEEEe
Confidence            45699999985   4999999999999985

>d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phospholipase C delta-1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.18  E-value=0.81  Score=32.35  Aligned_cols=38  Identities=26%  Similarity=0.371  Sum_probs=30.5

Q ss_pred             CceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHH
Q psy12865         19 DECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ   59 (227)
Q Consensus        19 D~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~   59 (227)
                      ..++|.|=.....   .++.|.|.|.+....|+.-|+.||+
T Consensus        82 ~~~~FsIv~~~~~---r~l~l~a~s~~~~~~Wv~~L~~L~~  119 (119)
T d1maia_          82 EDRCFSIVFKDQR---NTLDLIAPSPADAQHWVQGLRKIIH  119 (119)
T ss_dssp             GGGEEEEEESSSC---CCEEEECSSHHHHHHHHHHHHHHHC
T ss_pred             cCceEEEEEcCCC---cEEEEEECCHHHHHHHHHHHHHHhC
Confidence            3578998754432   2599999999999999999999874

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.00  E-value=0.17  Score=35.08  Aligned_cols=27  Identities=4%  Similarity=-0.049  Sum_probs=24.4

Q ss_pred             ccchhccccc--ceEEEEecceEEEecCC
Q psy12865        114 SSLEAKQLWV--KRLREVIQETYFSSALP  140 (227)
Q Consensus       114 ~~v~~d~~a~--~elsv~~gqtve~le~~  140 (227)
                      ..++.||.|.  +||++.+||.+.|++..
T Consensus        15 ~~Alydy~a~~~~ELs~~~Gd~i~Vl~~~   43 (83)
T d1bb9a_          15 VQAQHDYTATDTDELQLKAGDVVLVIPFQ   43 (83)
T ss_dssp             EEESSCBCCSSTTBCCBCTTCEEEEECCS
T ss_pred             EEEceeECCCCCCEecCcCCCEEEEEEcc
Confidence            4599999998  99999999999999864

>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src-associated adaptor protein Skap2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=81.09  E-value=0.78  Score=34.97  Aligned_cols=39  Identities=15%  Similarity=0.217  Sum_probs=30.2

Q ss_pred             ceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHh
Q psy12865         20 ECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE   60 (227)
Q Consensus        20 ~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~   60 (227)
                      ..+|.+.--..  +...|.|+|.|.+..+.|+..|+-+|++
T Consensus       169 ~~~~~F~i~~~--~~r~~~f~a~s~~e~~~Wi~al~~~i~~  207 (209)
T d1u5ea1         169 KKDCCFEICAP--DKRIYQFTAASPKDAEEWVQQLKFILQD  207 (209)
T ss_dssp             TGGGEEEEECS--SSCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred             CCCcEEEEEcC--CCCEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence            45566655432  3357999999999999999999999874

>d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: 3-phosphoinositide dependent protein kinase-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.08  E-value=0.78  Score=34.73  Aligned_cols=38  Identities=21%  Similarity=0.297  Sum_probs=29.4

Q ss_pred             CCceeEEEecCCCCCCCceEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy12865         18 GDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQET   61 (227)
Q Consensus        18 gD~~kFeiW~~r~~~s~~~~iLQAss~evK~~Wvk~IreiL~~q   61 (227)
                      .++..|.|-+..+     +|.|+|++.+ .+.||..|.+++...
T Consensus       100 ~~~~~F~I~t~~R-----ty~l~a~~~d-~~~Wv~aI~~v~~~~  137 (147)
T d1w1ha_         100 KNFKTFFVHTPNR-----TYYLMDPSGN-AHKWCRKIQEVWRQR  137 (147)
T ss_dssp             EETTEEEEECSSC-----EEEEECTTSC-HHHHHHHHHHHHHHH
T ss_pred             ccCceEEEecCce-----EEEEEcChHH-HHHHHHHHHHHHHHH
Confidence            3567899876543     5999998865 788999999997654