Psyllid ID: psy1287

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290--
Protein Sequence
MDDIRINITNFNVEQFSQEELSALINSAAIIYIKQYQDFISKLGAPVVIEHLNSMIKDFTIMEYSEDKMTKPRSLAGNVGIAVFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFCAMLVLLFFLCFTPDHKRFVQLTLVIGSTLTCAGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLVHNDVQLFFQTNT
Secondary Structure (PSIPRED)
cccEEEEEEccccccccHHHHHHHHHHcEEHHHHHHHHHHHHHccHHHHHHHHHHHHccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHccccccEEcccccccccccccHHHHHHccccccccHHHccccccEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccccccHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEcccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEHHHHHHHHccEEEEEcccHccHHccccHHHHHHHHHHHHHHHHHHHcccHHHccccccccccHHHccEEEEEcccccccccccccccccccEEEEccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHccccccccccccHEEEccEEEEccccccHHHHHHccccHHHHHHHHHHHHHHHHHcccEEEEEccc
Coil and Loop (DISEMBL)
MDDIRINITNFNVEQFSQEELSALINSAAIIYIKQYQDFISKLGAPVVIEHLNSMIKDFTIMeysedkmtkprslagnVGIAVFVIAFFCVVFAFFSAswlvsdsritgakfdrlglwthcfrslpdpndeyIRRFFVGCrwifdpftkgydqirgylvpgFLVFTEFFYTLTFLATIFCAMLVLLFFLCFTPDHKRFVQLTLVIGSTLTcagakfdrlglwthcfrslpdpndeyIRRFFVGCrwifdpftkgydqirgylvpgfLVFTEFFYTLTFLVHNDVQLFFQTNT
Flexible Loop (DISEMBL)
MDDIRINITNFNVEQFSQEELSALINSAAIIYIKQYQDFISKLGAPVVIEHLNSMIKDFTIMEYSEDKMTKPRSLAGNVGIAVFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFCAMLVLLFFLCFTPDHKRFVQLTLVIGSTLTCAGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLVHNDVQLFFQTNT
Low Complexity Region (SEG)
MDDIRINITNFNVEQFSQEELSALINSAAIIYIKQYQDFISKLGAPVVIEHLNSMIKDFTIMEYSEDKMTKPRSLAGNVGiavfviaffcvvfaffsasWLVSDSRITGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFCAMLVLLFFLCFTPDHKRFVQLTLVIGSTLTCAGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLVHNDVQLFFQTNT
Disordered region (IsUnstruct)
****RINITNFNVEQFSQEELSALINSAAIIYIKQYQDFISKLGAPVVIEHLNSMIKDFTIMEYSEDKMTKPRSLAGNVGIAVFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFCAMLVLLFFLCFTPDHKRFVQLTLVIGSTLTCAGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLVHNDVQLFFQ***
Disordered Region (DISOPRED)
**DIRINITNFNVEQFSQEELSALINSAAIIYIKQYQDFISKLGAPVVIEHLNSMIKDFT***************AGNVGIAVFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFCAMLVLLFFLCFTPDHKRFVQLTLVIGSTLTCAGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLVHNDVQLFFQTN*
Disordered Region (DISEMBL)
MDDIRINITNFNVEQFSQEELSALINSAAIIYIKQYQDFISKLGAPVVIEHLNSMIKDFTIMEYSEDKMTKPRSLAGNVGIAVFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFCAMLVLLFFLCFTPDHKRFVQLTLVIGSTLTCAGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLVHNDVQLFFQTNT
Disordered Region (DISPRO)
*DDIRINITNFNVEQFSQEELSALINSAAIIYIKQYQDFISKLGAPVVIEHLNSMIKDFTIMEYSEDKMTKPRSLAGNVGIAVFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFCAMLVLLFFLCFTPDHKRFVQLTLVIGSTLTCAGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLVHNDVQLFFQTN*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDDIRINITNFNVEQFSQEELSALINSAAIIYIKQYQDFISKLGAPVVIEHLNSMIKDFTIMEYSEDKMTKPRSLAGNVGIAVFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFCAMLVLLFFLCFTPDHKRFVQLTLVIGSTLTCAGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLVHNDVQLFFQTNT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	292
170050787	241	sinuous [Culex quinquefasciatus] gi|1678	0.493	0.597	0.645	2e-47
193662218	232	PREDICTED: hypothetical protein LOC10016	0.510	0.642	0.604	3e-47
328701824	220	PREDICTED: hypothetical protein LOC10016	0.489	0.65	0.622	1e-46
157109104	241	hypothetical protein AaeL_AAEL005218 [Ae	0.482	0.585	0.631	1e-46
344313245	222	putative sinuous [Plutella xylostella]	0.489	0.644	0.615	2e-46
312377947	222	hypothetical protein AND_10608 [Anophele	0.513	0.675	0.622	3e-46
157109106	223	hypothetical protein AaeL_AAEL005218 [Ae	0.472	0.618	0.637	1e-45
158288498	222	AGAP003809-PA [Anopheles gambiae str. PE	0.513	0.675	0.615	1e-45
357620909	222	hypothetical protein KGM_19307 [Danaus p	0.568	0.747	0.523	8e-45
194867049	247	GG14127 [Drosophila erecta] gi|190653778	0.489	0.578	0.594	3e-44

>gi|170050787|ref|XP_001861468.1| sinuous [Culex quinquefasciatus] gi|167872270|gb|EDS35653.1| sinuous [Culex quinquefasciatus]

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 93/144 (64%), Positives = 110/144 (76%)

Query: 63  EYSEDKMTKPRSLAGNVGIAVFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCF 122
           + SE  M K RSLAGN G+ VFVIA   V+ AF + SWLVSD RITGAK DRLGLWTHCF
Sbjct: 13  DASEIPMMKRRSLAGNCGVGVFVIALVTVLVAFATPSWLVSDYRITGAKLDRLGLWTHCF 72

Query: 123 RSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFCAM 182
           RSLPD ND+Y RRFFVGCRW++DPFT GYD+IRG+L+P F+V T+FF+TL  +A I   +
Sbjct: 73  RSLPDVNDDYQRRFFVGCRWVYDPFTTGYDEIRGFLIPPFMVATQFFFTLCAIAVILAMI 132

Query: 183 LVLLFFLCFTPDHKRFVQLTLVIG 206
           +VL FFLC  PD K FV+L   IG
Sbjct: 133 MVLFFFLCAGPDQKFFVKLIRAIG 156

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193662218|ref|XP_001947443.1| PREDICTED: hypothetical protein LOC100167635 isoform 3 [Acyrthosiphon pisum]

 Score =  194 bits (494), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 90/149 (60%), Positives = 112/149 (75%)

Query: 65  SEDKMTKPRSLAGNVGIAVFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCFRS 124
           + D   K RSLAGNV + ++V+A   V  +FFS SWLVSD RITGAK +  GLWTHCFRS
Sbjct: 8   NNDLRMKKRSLAGNVALGLYVLALVFVFISFFSTSWLVSDGRITGAKLESFGLWTHCFRS 67

Query: 125 LPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFCAMLV 184
           LPDPND   RRFFVGC WIFDPFTKGYD+I+G+L+P ++V T+FFYT+TFL T+  A+  
Sbjct: 68  LPDPNDPAERRFFVGCHWIFDPFTKGYDEIKGFLLPFYIVATQFFYTITFLGTLVSAVGS 127

Query: 185 LLFFLCFTPDHKRFVQLTLVIGSTLTCAG 213
            +F LC TPD KRF+Q+T  +G TL  +G
Sbjct: 128 SMFLLCCTPDEKRFIQITFALGVTLIVSG 156

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328701824|ref|XP_003241721.1| PREDICTED: hypothetical protein LOC100167635 isoform 2 [Acyrthosiphon pisum]

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 89/143 (62%), Positives = 110/143 (76%)

Query: 71  KPRSLAGNVGIAVFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCFRSLPDPND 130
           K RSLAGNV + ++V+A   V  +FFS SWLVSD RITGAK +  GLWTHCFRSLPDPND
Sbjct: 2   KKRSLAGNVALGLYVLALVFVFISFFSTSWLVSDGRITGAKLESFGLWTHCFRSLPDPND 61

Query: 131 EYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFCAMLVLLFFLC 190
              RRFFVGC WIFDPFTKGYD+I+G+L+P ++V T+FFYT+TFL T+  A+   +F LC
Sbjct: 62  PAERRFFVGCHWIFDPFTKGYDEIKGFLLPFYIVATQFFYTITFLGTLVSAVGSSMFLLC 121

Query: 191 FTPDHKRFVQLTLVIGSTLTCAG 213
            TPD KRF+Q+T  +G TL  +G
Sbjct: 122 CTPDEKRFIQITFALGVTLIVSG 144

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157109104|ref|XP_001650524.1| hypothetical protein AaeL_AAEL005218 [Aedes aegypti] gi|108879098|gb|EAT43323.1| AAEL005218-PC [Aedes aegypti]

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 89/141 (63%), Positives = 108/141 (76%)

Query: 66  EDKMTKPRSLAGNVGIAVFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCFRSL 125
           E +M K RSLAGN G+ VFVIA   V+ AF + SWLVSD RITGAK DRLGLWTHCFRSL
Sbjct: 16  EIQMMKRRSLAGNCGVGVFVIALVTVLVAFATPSWLVSDYRITGAKLDRLGLWTHCFRSL 75

Query: 126 PDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFCAMLVL 185
           PD ND+Y RRFFVGCRW++DPFT GYD+IRG+L+P F++ T+FFYTL  +  I   ++VL
Sbjct: 76  PDVNDDYQRRFFVGCRWVYDPFTTGYDEIRGFLIPPFMIATQFFYTLCTIGVILSMIMVL 135

Query: 186 LFFLCFTPDHKRFVQLTLVIG 206
            FFLC  PD K F++L   +G
Sbjct: 136 FFFLCAGPDQKFFLKLIRTMG 156

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|344313245|gb|AEN04482.1| putative sinuous [Plutella xylostella]

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 88/143 (61%), Positives = 107/143 (74%)

Query: 71  KPRSLAGNVGIAVFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCFRSLPDPND 130
           K RSLAGN GI VFVIA   V  AF + SWLVSD RI  A+ DRLGLW+HCFRSLPDP D
Sbjct: 2   KSRSLAGNCGIGVFVIALVTVALAFGTPSWLVSDDRIRSARLDRLGLWSHCFRSLPDPLD 61

Query: 131 EYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFCAMLVLLFFLC 190
           +Y RRFFVGCRW++DPFT GYD+IRGYL+PGF++ T+FF+TL  +  +   +LVL+FFLC
Sbjct: 62  QYQRRFFVGCRWVYDPFTTGYDRIRGYLLPGFMIATQFFFTLCLIGVLISTVLVLIFFLC 121

Query: 191 FTPDHKRFVQLTLVIGSTLTCAG 213
             PD +RF+ L   IG  +  AG
Sbjct: 122 CGPDQRRFLTLIKTIGYIMLGAG 144

Source: Plutella xylostella

Species: Plutella xylostella

Genus: Plutella

Family: Plutellidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312377947|gb|EFR24651.1| hypothetical protein AND_10608 [Anopheles darlingi]

 Score =  191 bits (485), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 94/151 (62%), Positives = 113/151 (74%), Gaps = 1/151 (0%)

Query: 71  KPRSLAGNVGIAVFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCFRSLPDPND 130
           K RSL+GN G+ VFVIA   V+ AF + SWLVSD RITGAK DRLGLWTHCFRSLPD ND
Sbjct: 2   KRRSLSGNCGVGVFVIALATVLVAFATPSWLVSDYRITGAKLDRLGLWTHCFRSLPDVND 61

Query: 131 EYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFCAMLVLLFFLC 190
           +Y RRFFVGCRW++DPFT GYD+IRG+L+P F+V T+FFYTL  +  I   +LVLL+FLC
Sbjct: 62  DYQRRFFVGCRWVYDPFTTGYDEIRGFLIPPFMVATQFFYTLCAIGVILAMVLVLLYFLC 121

Query: 191 FTPDHKRFVQLTLVIGSTLTCAGAKFDRLGL 221
             PD K FV+L   I S +T A A    +G+
Sbjct: 122 AGPDQKFFVKLIKAI-SYITLAAAVCGSIGV 151

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157109106|ref|XP_001650525.1| hypothetical protein AaeL_AAEL005218 [Aedes aegypti] gi|157109108|ref|XP_001650526.1| hypothetical protein AaeL_AAEL005218 [Aedes aegypti] gi|108879099|gb|EAT43324.1| AAEL005218-PB [Aedes aegypti] gi|108879100|gb|EAT43325.1| AAEL005218-PA [Aedes aegypti]

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 88/138 (63%), Positives = 106/138 (76%)

Query: 69  MTKPRSLAGNVGIAVFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCFRSLPDP 128
           M K RSLAGN G+ VFVIA   V+ AF + SWLVSD RITGAK DRLGLWTHCFRSLPD 
Sbjct: 1   MMKRRSLAGNCGVGVFVIALVTVLVAFATPSWLVSDYRITGAKLDRLGLWTHCFRSLPDV 60

Query: 129 NDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFCAMLVLLFF 188
           ND+Y RRFFVGCRW++DPFT GYD+IRG+L+P F++ T+FFYTL  +  I   ++VL FF
Sbjct: 61  NDDYQRRFFVGCRWVYDPFTTGYDEIRGFLIPPFMIATQFFYTLCTIGVILSMIMVLFFF 120

Query: 189 LCFTPDHKRFVQLTLVIG 206
           LC  PD K F++L   +G
Sbjct: 121 LCAGPDQKFFLKLIRTMG 138

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158288498|ref|XP_310369.6| AGAP003809-PA [Anopheles gambiae str. PEST] gi|347970686|ref|XP_003436626.1| AGAP003809-PB [Anopheles gambiae str. PEST] gi|347970688|ref|XP_003436627.1| AGAP003809-PC [Anopheles gambiae str. PEST] gi|157019111|gb|EAA05964.4| AGAP003809-PA [Anopheles gambiae str. PEST] gi|333466786|gb|EGK96380.1| AGAP003809-PB [Anopheles gambiae str. PEST] gi|333466787|gb|EGK96381.1| AGAP003809-PC [Anopheles gambiae str. PEST]

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 93/151 (61%), Positives = 113/151 (74%), Gaps = 1/151 (0%)

Query: 71  KPRSLAGNVGIAVFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCFRSLPDPND 130
           K RSL+GN G+ VFVIA   V+ AF + SWLVSD RITGAK DRLGLWTHCFRSLPD ND
Sbjct: 2   KRRSLSGNCGVGVFVIALVTVLVAFATPSWLVSDYRITGAKLDRLGLWTHCFRSLPDVND 61

Query: 131 EYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFCAMLVLLFFLC 190
           +Y RRFFVGCRW++DPFT GYD+IRG+L+P F+V T+FFYTL  +  I   +LVLL+FLC
Sbjct: 62  DYQRRFFVGCRWVYDPFTTGYDEIRGFLIPPFMVATQFFYTLCAIGVILAMVLVLLYFLC 121

Query: 191 FTPDHKRFVQLTLVIGSTLTCAGAKFDRLGL 221
             PD K FV+L   I S +T A +    +G+
Sbjct: 122 AGPDQKFFVKLIKAI-SFITLAASICGSIGV 151

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357620909|gb|EHJ72928.1| hypothetical protein KGM_19307 [Danaus plexippus]

 Score =  186 bits (473), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 89/170 (52%), Positives = 114/170 (67%), Gaps = 4/170 (2%)

Query: 71  KPRSLAGNVGIAVFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCFRSLPDPND 130
           + RSLAGN GI VF+IA   V  AF + SWLVSD RI GAK DRLGLW+HCFRSL DP D
Sbjct: 2   RKRSLAGNCGIIVFLIALVTVALAFGTPSWLVSDYRIRGAKLDRLGLWSHCFRSLADPLD 61

Query: 131 EYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFCAMLVLLFFLC 190
           +Y RRFFVGCRW++DPFT GYD+IRGYL+PGF++ T+ F+TL  +  +   +LV++FFLC
Sbjct: 62  QYQRRFFVGCRWVYDPFTTGYDKIRGYLLPGFMIATQLFFTLCLIGVMVSTVLVIIFFLC 121

Query: 191 FTPDHKRFVQLTLVIGSTLTCAGAKFDRLGLWTHCFRS----LPDPNDEY 236
             P+  RFV +   IG  +  AG       +   CF +    +PD  + Y
Sbjct: 122 CGPNQNRFVMIIKTIGYIMLAAGLSGGLAVIIFACFGNTDGWMPDHANNY 171

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194867049|ref|XP_001971995.1| GG14127 [Drosophila erecta] gi|190653778|gb|EDV51021.1| GG14127 [Drosophila erecta]

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 85/143 (59%), Positives = 106/143 (74%)

Query: 71  KPRSLAGNVGIAVFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCFRSLPDPND 130
           K R+L+G+ G+ VFV AF  +V AF + SWLVSD RITGAK DRLGLW HCFRSLPD ND
Sbjct: 30  KRRTLSGSCGVGVFVFAFAFIVIAFATPSWLVSDYRITGAKLDRLGLWVHCFRSLPDVND 89

Query: 131 EYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFCAMLVLLFFLC 190
           +  RRFFVGCRW++DPFT GYD+IRG+L+P F++ T+FFYTL F+  +  A+ VL+F LC
Sbjct: 90  DSQRRFFVGCRWVYDPFTTGYDEIRGFLLPAFMIATQFFYTLAFIGMLLSAIGVLVFILC 149

Query: 191 FTPDHKRFVQLTLVIGSTLTCAG 213
             PD K F+ L   +G  L  AG
Sbjct: 150 AGPDQKHFITLIRSVGYVLLGAG 172

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	292
FB|FBgn0010894	263	sinu "sinuous" [Drosophila mel	0.489	0.543	0.531	9.9e-39
FB|FBgn0033032	264	kune "kune-kune" [Drosophila m	0.352	0.390	0.351	3e-11
FB|FBgn0013720	256	pck "pickel" [Drosophila melan	0.273	0.312	0.337	6.4e-06

FB|FBgn0010894 sinu "sinuous" [Drosophila melanogaster (taxid:7227)]

 Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
 Identities = 76/143 (53%), Positives = 94/143 (65%)

Query:    71 KPRSLAGNVGXXXXXXXXXXXXXXXXXXXWLVSDSRITGAKFDRLGLWTHCFRSLPDPND 130
             K R+L+G+ G                   WLVSD RITGAK DRLGLW HCFRSLPD ND
Sbjct:    30 KRRTLSGSCGVGVFVFAFAFIVIAFATPSWLVSDYRITGAKLDRLGLWVHCFRSLPDVND 89

Query:   131 EYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFCAMLVLLFFLC 190
             +  RRFFVGCRW++DPFT GYD+IRG+L+P F++ T+FFYTL F+  +  A+ VL+F LC
Sbjct:    90 DSQRRFFVGCRWVYDPFTTGYDEIRGFLLPAFMIATQFFYTLAFIGMLVSAIGVLVFILC 149

Query:   191 FTPDHKRFVQLTLVIGSTLTCAG 213
               PD K F+ L   +G  L  AG
Sbjct:   150 AGPDQKHFITLIKSLGYVLLGAG 172

GO:0007424 "open tracheal system development" evidence=IMP

GO:0035151 "regulation of tube size, open tracheal system" evidence=IMP

GO:0005918 "septate junction" evidence=IDA

GO:0019991 "septate junction assembly" evidence=NAS;IMP

GO:0060857 "establishment of glial blood-brain barrier" evidence=IMP

FB|FBgn0033032 kune "kune-kune" [Drosophila melanogaster (taxid:7227)]

 Score = 170 (64.9 bits), Expect = 3.0e-11, P = 3.0e-11
 Identities = 38/108 (35%), Positives = 57/108 (52%)

Query:   100 WLVSDSRITGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLV 159
             WLV+D R+   +F  LGLW  CF +  D +  +    F GC W+F+   + Y  I  +L+
Sbjct:    31 WLVTDGRLQNPRFTNLGLWEVCFNNFQDIH-RFFDNSFNGCLWVFE---EEYYIIHDFLL 86

Query:   160 PGFLVFTEFFYTLTFLATIFCAMLVLLFFLCFTPDHKRFVQLTLVIGS 207
             PGF +  + F TL F+  +    L + F L  + D  R++ L L IGS
Sbjct:    87 PGFYISVQLFATLCFVMCLVVIPLTVAF-LRTSRDDDRYMVLLLAIGS 133

GO:0005918 "septate junction" evidence=ISS;IDA

GO:0060857 "establishment of glial blood-brain barrier" evidence=IMP

GO:0035159 "regulation of tube length, open tracheal system" evidence=IMP

GO:0019991 "septate junction assembly" evidence=IMP

GO:0005919 "pleated septate junction" evidence=IDA

FB|FBgn0013720 pck "pickel" [Drosophila melanogaster (taxid:7227)]

 Score = 127 (49.8 bits), Expect = 6.4e-06, P = 6.4e-06
 Identities = 29/86 (33%), Positives = 48/86 (55%)

Query:   100 WLVSDSRITGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLV 159
             W+ S    T A F  +GLW +CF+    P   ++++F  GC  IF   +  Y  IR YL+
Sbjct:    52 WIESYEE-TRASFKNMGLWQYCFKDFVYPKYAFLKQF-TGCHNIF---SHEYYVIREYLL 106

Query:   160 PGFLVFTEFFYTLTFLATIFCAMLVL 185
             PG+L+  + F T++F+  +F  + +L
Sbjct:   107 PGWLMAVQGFVTMSFII-VFLVLALL 131

GO:0007424 "open tracheal system development" evidence=IMP

GO:0035151 "regulation of tube size, open tracheal system" evidence=IMP

GO:0019991 "septate junction assembly" evidence=IMP

GO:0005918 "septate junction" evidence=ISS

GO:0060857 "establishment of glial blood-brain barrier" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	292
pfam13903	170	pfam13903, Claudin_2, PMP-22/EMP/MP20/Claudin tigh	3e-04

>gnl|CDD|222446 pfam13903, Claudin_2, PMP-22/EMP/MP20/Claudin tight junction

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 22/131 (16%), Positives = 36/131 (27%), Gaps = 37/131 (28%)

Query: 85  VIAFFCVVFAFFSASWLVSDSRITG----------AKFDRLGLWTHCFRSLPDPNDEYIR 134
            +A   ++ A  +  W+ +D R T             F  LGLW  CF S  D N+    
Sbjct: 1   CLALGLLLVALATDYWVEADPRRTNSLGSNGAVNTGLFSHLGLWRICFTSEVDVNNFV-- 58

Query: 135 RFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFCAMLVLLFFLCFTPD 194
                                   +      T        L  +  ++L  +  LC    
Sbjct: 59  ------------------------LTSLPDLTIVVLLFLTLGLVL-SLLACVLGLCSALK 93

Query: 195 HKRFVQLTLVI 205
               + L   +
Sbjct: 94  KSGALLLLTGV 104

Members of this family are claudins, that form tight junctions between cells. Length = 170

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	292
PF13903	172	Claudin_2: PMP-22/EMP/MP20/Claudin tight junction	99.29
PF00822	166	PMP22_Claudin: PMP-22/EMP/MP20/Claudin family; Int	98.39
PF07062	211	Clc-like: Clc-like; InterPro: IPR010761 Clc protei	97.93
PF10242	181	L_HGMIC_fpl: Lipoma HMGIC fusion partner-like prot	97.78
KOG4026|consensus	207		96.85
KOG4671|consensus	201		95.64
PF06653	163	Claudin_3: Tight junction protein, Claudin-like; I	94.06
PF13903	172	Claudin_2: PMP-22/EMP/MP20/Claudin tight junction	89.53
PF06687	212	SUR7: SUR7/PalI family; InterPro: IPR009571 This f	82.15

>PF13903 Claudin_2: PMP-22/EMP/MP20/Claudin tight junction

Probab=99.29  E-value=6.8e-12  Score=101.22  Aligned_cols=100  Identities=30%  Similarity=0.509  Sum_probs=82.2

Q ss_pred             HHHHHHHHHhcCcceeeecccccC------------CccceechhHHhhccCCCCCchhhhccccceeeeecCCccchhh
Q psy1287          86 IAFFCVVFAFFSASWLVSDSRITG------------AKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQ  153 (292)
Q Consensus        86 iAf~~v~IAF~SPyWLvSd~rl~~------------~kF~rlGLWe~CF~~F~dP~~~~~d~~F~GC~WIy~PFt~eYy~  153 (292)
                      +|++++++|++||+|++++++.++            .++.+.|||+.|...-+++++..                     
T Consensus         2 la~~L~~ia~~T~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~Glw~~c~~~~~~~~~~~---------------------   60 (172)
T PF13903_consen    2 LALILLIIAFGTPYWVVSDPRRTGFNCTESNNSVNFGLFSHSGLWRICFQREYDSSNRN---------------------   60 (172)
T ss_pred             hHHHHHHHHHcCchHhEEeeeccCccccccccccccccccccCcceEeecCCcCcccch---------------------
Confidence            688999999999999999999775            38889999999999998888611                     


Q ss_pred             hhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHhHHhhhcCC
Q psy1287         154 IRGYLVPGFLVFTEFFYTLTFLATIFCAMLVLLFFLCFTPDHKRFVQLTLVIGSTLTCAGA  214 (292)
Q Consensus       154 Ird~LlPgffiAtQ~FfTl~~ll~l~s~~l~~l~~Lc~~~d~~ryv~ll~~~g~~l~~AgA  214 (292)
                        +...|.|..++|.|..+++++.+++.+..++- .|+.|.     ...+..|.+.++||.
T Consensus        61 --~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~-~~~~~~-----~~~~~~~~~~~~ag~  113 (172)
T PF13903_consen   61 --ETTNPHWMRATIAFLILGLLLLLFAFVFALIG-FCKRSY-----TLYLFAGILFILAGL  113 (172)
T ss_pred             --hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcccc-----chhHHHHHHHHHHHH
Confidence              67889999999999999999999999999877 555332     444446666666666

>PF00822 PMP22_Claudin: PMP-22/EMP/MP20/Claudin family; InterPro: IPR004031 Several vertebrate small integral membrane glycoproteins are evolutionary related [, , ], including eye lens specific membrane protein 20 (MP20 or MP19); epithelial membrane protein-1 (EMP-1), which is also known as tumor-associated membrane protein (TMP) or as squamous cell-specific protein Cl-20; epithelial membrane protein-2 (EMP-2), which is also known as XMP; epithelial membrane protein-3 (EMP-3), also known as YMP; and peripheral myelin protein 22 (PMP-22), which is expressed in many tissues but mainly by Schwann cells as a component of myelin of the peripheral nervous system (PNS)

Probab=98.39  E-value=4.2e-07  Score=74.31  Aligned_cols=109  Identities=24%  Similarity=0.374  Sum_probs=74.3

Q ss_pred             hhhHHHHH-HHHHHHHhcCcceeeecccccCCccceechhHHhhccCCCCCchhhhccccceeeeecCCccchhhhhccc
Q psy1287          80 GIAVFVIA-FFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYL  158 (292)
Q Consensus        80 a~~~t~iA-f~~v~IAF~SPyWLvSd~rl~~~kF~rlGLWe~CF~~F~dP~~~~~d~~F~GC~WIy~PFt~eYy~Ird~L  158 (292)
                      |..++.++ ..++++|-.+|+|.+++..-   +..+-|||+.|..+=..-        -..|.-. |.+.         -
T Consensus         7 ~~~~~~~~~~~~liva~~~~~W~~~~~~~---~~~~~GLW~~C~~~~~~~--------~~~c~~~-~~~~---------~   65 (166)
T PF00822_consen    7 GFIVSSLGWLALLIVATATPYWRVSNVSG---QSRWSGLWRECIQQSCTG--------STQCDSY-DSFL---------S   65 (166)
T ss_pred             HHHHHHHHHHHHHHHHcCchHheEecCcC---ccceeCCccccCCcCcCc--------eeccccc-Cccc---------c
Confidence            34445444 44788999999999999883   889999999999854111        1134321 2111         2


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHhHHhhhcCC
Q psy1287         159 VPGFLVFTEFFYTLTFLATIFCAMLVLLFFLCFTPDHKRFVQLTLVIGSTLTCAGA  214 (292)
Q Consensus       159 lPgffiAtQ~FfTl~~ll~l~s~~l~~l~~Lc~~~d~~ryv~ll~~~g~~l~~AgA  214 (292)
                      .|+++.|+|.++.++.++.++++++..+- ++|.+..++...    .|.+.++||.
T Consensus        66 ~~~~~~a~r~l~i~s~il~~l~~~l~~~g-~~~~~~~~~~~~----ag~l~~~agl  116 (166)
T PF00822_consen   66 LPGYLQAARALMILSIILGFLGLILALFG-LCCTKRGPRPKV----AGILFILAGL  116 (166)
T ss_pred             hhHHHHHHHHHhHHHHHHHHHHHHHHHhc-ccccccCCCCCc----ceeeeHHHhh
Confidence            58999999999999999999999998887 555544433222    4445555554

PMP-22 probably plays a role both in myelinization and in cell proliferation. Mutations affecting PMP-22 are associated with hereditary motor and sensory neuropathies such as Charcot-Marie-Tooth disease type 1A (CMT-1A) in human or the trembler phenotype in mice. The proteins of this family are about 160 to 173 amino acid residues in size, and contain four transmembrane segments. PMP-22, EMP-1, -2 and -3 are highly similar, while MP20 is more distantly related. This family also includes the claudins, which are components of tight junctions.; GO: 0016020 membrane

>PF07062 Clc-like: Clc-like; InterPro: IPR010761 Clc proteins are a nine-member gene family of chloride channels that have diverse roles in the plasma membrane and in intracellular organelles, especially membrane excitability and the maintenance of osmotic balance [, ]

Probab=97.93  E-value=0.0001  Score=67.06  Aligned_cols=113  Identities=19%  Similarity=0.308  Sum_probs=80.2

Q ss_pred             chhhHHHHHHHHHHHHhcCcce-eeecccccCCccceechhHHhhccCCCCCchh-hhccccceeeeecCCcc--chh--
Q psy1287          79 VGIAVFVIAFFCVVFAFFSASW-LVSDSRITGAKFDRLGLWTHCFRSLPDPNDEY-IRRFFVGCRWIFDPFTK--GYD--  152 (292)
Q Consensus        79 ~a~~~t~iAf~~v~IAF~SPyW-LvSd~rl~~~kF~rlGLWe~CF~~F~dP~~~~-~d~~F~GC~WIy~PFt~--eYy--  152 (292)
                      .+.+++.+|+++..+|-.||+| .+..+| .+.. .+=|||..|-+....+.... +|.-=.-|++.+|- +.  .|+  
T Consensus         6 ~s~vl~lig~~L~~~al~SPsWQvv~~~e-~~~~-h~hGLW~dC~~~~~~~~~~~~~~~~~~~C~ykFd~-~~~~~y~~~   82 (211)
T PF07062_consen    6 FSFVLILIGLILTFIALFSPSWQVVNIRE-FRAY-HQHGLWLDCQRPESHLLARDDDDEGPLHCTYKFDY-DDEQNYDEK   82 (211)
T ss_pred             HHHHHHHHHHHHHHHHHcCCceEEEEecc-cCcE-EecceeeecCCccccccchhcccCCCceEEEEcCc-cHHHHHHHH
Confidence            5788999999999999999999 556666 4555 88899999999888554311 11102459999762 22  344  


Q ss_pred             -----------hhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcch
Q psy1287         153 -----------QIRGYLVPGFLVFTEFFYTLTFLATIFCAMLVLLFFLCFTPDH  195 (292)
Q Consensus       153 -----------~Ird~LlPgffiAtQ~FfTl~~ll~l~s~~l~~l~~Lc~~~d~  195 (292)
                                 +++.-..=||=.||=+++..++++.++|+....+- .|.++.-
T Consensus        83 ~~~~~~~~~~~~~~~h~F~gWh~AvLil~~~s~lf~~lsi~~~iCa-~c~~~~a  135 (211)
T PF07062_consen   83 VDNCDGNSNVGESETHCFFGWHKAVLILISFSMLFALLSICFGICA-PCHPSFA  135 (211)
T ss_pred             HhhcccCCcccccccceehhHHHHHHHHHHHHHHHHHHHHHHHHhh-hcCCcHH
Confidence                       23333445888999999999999999998776655 4554443

This family contains a number of Clc-like proteins that are approximately 250 residues long and their homologues. ; GO: 0016021 integral to membrane

>PF10242 L_HGMIC_fpl: Lipoma HMGIC fusion partner-like protein; InterPro: IPR019372 This is a group of proteins expressed from a series of genes referred to as Lipoma HGMIC fusion partner-like

Probab=97.78  E-value=0.00014  Score=63.53  Aligned_cols=115  Identities=17%  Similarity=0.276  Sum_probs=67.4

Q ss_pred             hhHHHHHHHHHHHHhcCcceeeecccccCCccceechhHHhhccCCCCCchhhhccccceeeeecCCccchhhhhcccch
Q psy1287          81 IAVFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVP  160 (292)
Q Consensus        81 ~~~t~iAf~~v~IAF~SPyWLvSd~rl~~~kF~rlGLWe~CF~~F~dP~~~~~d~~F~GC~WIy~PFt~eYy~Ird~LlP  160 (292)
                      ++++.++.++.++||.+|+||+...+  ++.=-++|||.+|-++-.++        -.-|.--.+.|       .|.--.
T Consensus         6 ~llsl~~ail~~vsfi~P~Wl~~~~~--~~~~~sfGlf~rC~~~~~~~--------~~~C~~~~~~f-------~~iPs~   68 (181)
T PF10242_consen    6 ALLSLCAAILCVVSFISPYWLGGSES--TPYSGSFGLFRRCSGQMDEW--------EQECGGYAESF-------GDIPSS   68 (181)
T ss_pred             HHHHHHHHHHHHHHHcCchhccCCcC--CCCCceEEeehhhCcCCCCC--------CCccCCcCCCc-------cccCcH
Confidence            56899999999999999999998654  56778999999999211111        23454321112       221122


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CcchhHHHHHHHHHhHHhhhcCC
Q psy1287         161 GFLVFTEFFYTLTFLATIFCAMLVLLFFLCF----TPDHKRFVQLTLVIGSTLTCAGA  214 (292)
Q Consensus       161 gffiAtQ~FfTl~~ll~l~s~~l~~l~~Lc~----~~d~~ryv~ll~~~g~~l~~AgA  214 (292)
                      .| -+.=+|+.++.++..+.. ++++..+|.    ++.--+....+..++.++++.|.
T Consensus        69 ~W-kaa~~~~~~g~~Ll~~~~-~~~L~~~c~~~~~~~sv~~i~g~~Q~~A~l~~~~g~  124 (181)
T PF10242_consen   69 AW-KAAAFFVGIGCVLLLLIA-LLSLFSCCFRSICSRSVFKICGWLQFVAGLCLLLGC  124 (181)
T ss_pred             HH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHhccCCceEeeechHHHHHHHHHHHHhh
Confidence            36 555677777777744444 444443665    23333334444444444444443

The proteins carry four highly conserved transmembrane domains. In certain instances, as in LHFPL5, mutations cause deafness in humans [] or hypospadias []. LHFPL1 is transcribed in six liver tumour cell lines [].

>KOG4026|consensus

Probab=96.85  E-value=0.0077  Score=55.39  Aligned_cols=100  Identities=19%  Similarity=0.303  Sum_probs=69.8

Q ss_pred             cccchhhHHHHHHHHHHHHhcCcceeeecccccCCccceechhHHhhccCCCCCchhhhccccceeeeecCCccchhhhh
Q psy1287          76 AGNVGIAVFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIR  155 (292)
Q Consensus        76 ~g~~a~~~t~iAf~~v~IAF~SPyWLvSd~rl~~~kF~rlGLWe~CF~~F~dP~~~~~d~~F~GC~WIy~PFt~eYy~Ir  155 (292)
                      +|.+=++++....++.++||.+|||+.++.-  + |=-+.|||.+|-.+=.+++-  .++   | +|-          =+
T Consensus         9 ~gviW~l~t~c~a~l~~v~fi~P~Wig~~~~--~-~~g~fGl~~~C~~~~~~~~~--~~~---~-~~~----------~~   69 (207)
T KOG4026|consen    9 VGVIWALCTICFAVLFMVAFIQPYWIGDSVN--G-KPGSFGLFTYCVGPVLPGSL--ECR---G-RLA----------SF   69 (207)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccceeccCCcC--C-CCccccceeeccCCCCCCcc--ccc---C-Ccc----------cc
Confidence            3445567899999999999999999997744  2 66789999999765444441  011   0 111          12


Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Q psy1287         156 GYLVPGFLVFTEFFYTLTFLATIFCAMLVLLFFLCFTPD  194 (292)
Q Consensus       156 d~LlPgffiAtQ~FfTl~~ll~l~s~~l~~l~~Lc~~~d  194 (292)
                      --..|-++.+-=+|+-+++.+.+...+.+.+..+|++++
T Consensus        70 ~~ips~~~~~a~f~vlla~~Lill~i~~~~l~~~c~~~s  108 (207)
T KOG4026|consen   70 SSIPSNEFKLAAFFVLLAFVLILLLIVFLALLGCCRSKS  108 (207)
T ss_pred             ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhh
Confidence            224567888888999999999997777777774666533

>KOG4671|consensus

Probab=95.64  E-value=0.031  Score=51.21  Aligned_cols=53  Identities=25%  Similarity=0.478  Sum_probs=41.0

Q ss_pred             chhhHHHHHHHHHHHHhcCcceeeecccccCCccceechhHHhhccCCCCCchhhhcccc--ceeee
Q psy1287          79 VGIAVFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCFRSLPDPNDEYIRRFFV--GCRWI  143 (292)
Q Consensus        79 ~a~~~t~iAf~~v~IAF~SPyWLvSd~rl~~~kF~rlGLWe~CF~~F~dP~~~~~d~~F~--GC~WI  143 (292)
                      .+.++-++|..+.++|-+||.||++++.       |=|||+.|.+.=..|.     ..|+  ||+|-
T Consensus        20 i~licl~~aial~IvAl~s~~Wl~as~~-------~q~Lw~~C~~~~~~~~-----~pfd~~~C~s~   74 (201)
T KOG4671|consen   20 ILLICLLSAIALDIVALASRGWLQASDQ-------RQGLWWSCRKPASTHA-----APFDPGGCQST   74 (201)
T ss_pred             HHHHHHHHHHHHHHHHhccchhhhcCCC-------CcceeeeecCcCCcCC-----CCcCCccCcCh
Confidence            3567778888889999999999999877       3469999998665222     2244  99998

>PF06653 Claudin_3: Tight junction protein, Claudin-like; InterPro: IPR009545 This family consists of several Caenorhabditis elegans specific proteins of unknown function

Probab=94.06  E-value=0.47  Score=40.88  Aligned_cols=65  Identities=15%  Similarity=0.417  Sum_probs=50.8

Q ss_pred             HHHHHHHHHHHHhcCcceeeecccccCCccceechhHHhhccCCCCCchhhhccccceeeeecCCccchhhhhcccchhh
Q psy1287          83 VFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGF  162 (292)
Q Consensus        83 ~t~iAf~~v~IAF~SPyWLvSd~rl~~~kF~rlGLWe~CF~~F~dP~~~~~d~~F~GC~WIy~PFt~eYy~Ird~LlPgf  162 (292)
                      +-.+++++..+|-.||.|.+....                       +      ...|..| -||..        -.|+|
T Consensus        11 ~i~i~~iL~~vgvFTp~W~~~~~~-----------------------~------~~~~~GI-vP~~~--------~~~~W   52 (163)
T PF06653_consen   11 LILIGFILNAVGVFTPCWITDSNY-----------------------K------ISISIGI-VPYSS--------SEPGW   52 (163)
T ss_pred             HHHHHHHHHHHheECCceEEEeCC-----------------------c------ccceeeE-EeCCC--------CCccH
Confidence            378899999999999999998866                       1      3468888 57663        56889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Q psy1287         163 LVFTEFFYTLTFLATIFCAMLVL  185 (292)
Q Consensus       163 fiAtQ~FfTl~~ll~l~s~~l~~  185 (292)
                      +-|.=.++.+++.+.++..+...
T Consensus        53 ~~~as~lm~is~~~~~i~i~~~~   75 (163)
T PF06653_consen   53 FAAASWLMYISFACFIIMIIFYI   75 (163)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998887776664333

>PF13903 Claudin_2: PMP-22/EMP/MP20/Claudin tight junction

Probab=89.53  E-value=0.29  Score=39.60  Aligned_cols=46  Identities=26%  Similarity=0.434  Sum_probs=37.1

Q ss_pred             CCccEEeeehcccCCCCCCCCcccccCccceEeeecCCccchhhhhccccchhhHHHHHHHHHHHhhhc
Q psy1287         214 AKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLVHN  282 (292)
Q Consensus       214 AKF~rLGLWe~CF~~F~~P~~~y~~~~F~GC~wIf~p~s~EY~~Ird~LlPgwfiavQ~F~Tl~lll~~  282 (292)
                      .++.+.|||+.|...-++++...                       +...|.|..++|++..+++++.+
T Consensus        38 ~~~~~~Glw~~c~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~l~~~~~~   83 (172)
T PF13903_consen   38 GLFSHSGLWRICFQREYDSSNRN-----------------------ETTNPHWMRATIAFLILGLLLLL   83 (172)
T ss_pred             ccccccCcceEeecCCcCcccch-----------------------hhhhHHHHHHHHHHHHHHHHHHH
Confidence            46788899999998887776622                       56789999999999999877654

>PF06687 SUR7: SUR7/PalI family; InterPro: IPR009571 This family consists of several fungal-specific SUR7 proteins

Probab=82.15  E-value=11  Score=32.43  Aligned_cols=99  Identities=23%  Similarity=0.429  Sum_probs=57.5

Q ss_pred             chhhHHHHHHHHHHHHhcCcc----e------eeecc-cc----cCCccceechhHHhhccCCCCCchhhhcccccee--
Q psy1287          79 VGIAVFVIAFFCVVFAFFSAS----W------LVSDS-RI----TGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCR--  141 (292)
Q Consensus        79 ~a~~~t~iAf~~v~IAF~SPy----W------LvSd~-rl----~~~kF~rlGLWe~CF~~F~dP~~~~~d~~F~GC~--  141 (292)
                      ++..++.+|+++++++..++.    .      ++-|- ++    .-+++-+.|+|.+|-.  .+..+      -..|.  
T Consensus         4 ~~~~~~~~a~il~il~~i~~~~~~~~~~~l~~~~~~~s~~~~~~g~~~~y~~gl~g~C~~--~~~~~------~~~Cs~~   75 (212)
T PF06687_consen    4 IPLLLSLAAFILLILALISGPSNSSVLKSLYFLKLDTSGLGISLGLPDFYRFGLWGYCEG--NNGTN------ITSCSSP   75 (212)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCcccceEEEEEECCCCCccCCCCCeEEEEEEEEeee--CCCCC------CCccCCC
Confidence            467788888888877766554    4      44443 11    2357899999999998  11111      23454  


Q ss_pred             ---eeecCCccchh----hhhcccchhh-----------HHHHHHHHHHHHHHHHHHHHHHHH
Q psy1287         142 ---WIFDPFTKGYD----QIRGYLVPGF-----------LVFTEFFYTLTFLATIFCAMLVLL  186 (292)
Q Consensus       142 ---WIy~PFt~eYy----~Ird~LlPgf-----------fiAtQ~FfTl~~ll~l~s~~l~~l  186 (292)
                         +-+||- +..+    ...+.-+|+-           .-++..+.-++..++++++++..+
T Consensus        76 ~~~y~f~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~ia~~~t~l~~~~~~~  137 (212)
T PF06687_consen   76 SPGYPFDPR-EILDSELNSLSDLGLPSSLRSALDYYNNLLKAMFILYPIAIVFTFLALILSGL  137 (212)
T ss_pred             CCCCCCCHH-HHhcccchhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               333332 1000    1234456664           444777777777777777777444

Its activity regulates expression of RVS161, a homologue of human endophilin, suggesting a function for both in endocytosis [, ]. The protein carries four transmembrane domains and is thus likely to act as an anchoring protein for the eisosome to the plasma membrane. Eisosomes are the immobile protein complexes, that include the proteins Pil1 and Lsp1, which co-localise with sites of protein and lipid endocytosis at the plasma membrane. SUR7 protein may play a role in sporulation []. Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This family also includes PalI which is part of a pH signal transduction cascade. Based on the similarity of PalI to the yeast Rim9 meiotic signal transduction component it has been suggested that PalI might be a membrane sensor for ambient pH [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00