Psyllid ID: psy12932

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------
Protein Sequence
MAAITTGTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ
Secondary Structure (PSIPRED)
ccccccccEEEEEEcccHHHHHHHHHHHHHcccEEEEEEEEccEEEEEEEHHHHcccHHHHHHHHHccccccHHHHHHHHHHHHHccEEEEEHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEEcccHHHHHHHHHHHHHccccEEEEEEEcccEEHHHHEEEccccHHHHHccccccEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
maaittgtnFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIilsasspffqNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIilsasspffq
Flexible Loop (DISEMBL)
maaittgtnfcmkWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRiilsasspffq
Low Complexity Region (SEG)
MAAITTGTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ
Disordered region (IsUnstruct)
***ITTGTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIIL********
Disordered Region (DISOPRED)
***********MKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ
Disordered Region (DISEMBL)
MAAITTGTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ
Disordered Region (DISPRO)
******GTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAAITTGTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	107	2.2.26 [Sep-21-2011]
Q9W0K4	1067	Protein bric-a-brac 2 OS=	yes	N/A	0.457	0.045	0.490	6e-11
Q9W0K7	977	Protein bric-a-brac 1 OS=	no	N/A	0.504	0.055	0.462	5e-10
Q8IN81	955	Sex determination protein	no	N/A	0.738	0.082	0.395	3e-09
P17789	643	Protein tramtrack, beta i	no	N/A	0.738	0.122	0.372	6e-09
Q9V5M6	963	Longitudinals lacking pro	no	N/A	0.719	0.079	0.375	8e-09
Q7KQZ4	787	Longitudinals lacking pro	no	N/A	0.719	0.097	0.375	8e-09
P42282	813	Protein tramtrack, alpha	no	N/A	0.738	0.097	0.372	1e-08
Q01295	727	Broad-complex core protei	no	N/A	0.514	0.075	0.418	1e-08
P42283	891	Longitudinals lacking pro	no	N/A	0.719	0.086	0.375	1e-08
Q867Z4	970	Longitudinals lacking pro	no	N/A	0.719	0.079	0.375	1e-08

>sp|Q9W0K4|BAB2_DROME Protein bric-a-brac 2 OS=Drosophila melanogaster GN=bab2 PE=1 SV=2

 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 39/55 (70%)

Query: 7   GTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 61
           G  FC++W N+Q +L     +LL+ ES VDVTL  EG + +AH+++LSA SP+FQ
Sbjct: 195 GQQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYFQ 249

Probably acts as a transcriptional regulator. Required for the specification of the tarsal segment. Also involved in antenna development.
Drosophila melanogaster (taxid: 7227)

>sp|Q9W0K7|BAB1_DROME Protein bric-a-brac 1 OS=Drosophila melanogaster GN=bab1 PE=2 SV=2

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/54 (46%), Positives = 37/54 (68%)

Query: 10  FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF 63
           FC++W N+Q +L     QLL+ E  VDVTL  +G + +AH+++LSA SP+FQ  
Sbjct: 102 FCLRWNNYQTNLTTIFDQLLQNECFVDVTLACDGRSMKAHKMVLSACSPYFQTL 155

Probably acts as a transcriptional regulator. Required for the specification of the tarsal segment. Also involved in antenna development.

Drosophila melanogaster (taxid: 7227)

>sp|Q8IN81|FRU_DROME Sex determination protein fruitless OS=Drosophila melanogaster GN=fru PE=1 SV=1

 Score = 60.8 bits (146), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 7/86 (8%)

Query: 10  FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF-----QNFQ 64
           FC++W N   +L   L  LL+ E++ DVTL  EGE  +AH+ ILSA SP+F     QN  
Sbjct: 106 FCLRWNNHPTNLTGVLTSLLQREALCDVTLACEGETVKAHQTILSACSPYFETIFLQNQH 165

Query: 65  VHLAFELYQLL--KMESMVDVTLKAE 88
            H    L  +   +M S++D   K E
Sbjct: 166 PHPIIYLKDVRYSEMRSLLDFMYKGE 191

Probably acts as a transcriptional regulator. Part of the somatic sex determination hierarchy; sex determination genes transformer (tra) and transformer-2 (tra-2) switch fru splicing from the male-specific pattern to the female-specific pattern through activation of the female-specific fru 5'-splice site. Vital for the development of males and females. Controls the development of the male specific abdominal muscle of Lawrence. Plays a role in male courtship behavior and sexual orientation. Enhances male-specific expression of takeout in brain-associated fat body.

Drosophila melanogaster (taxid: 7227)

>sp|P17789|TTKB_DROME Protein tramtrack, beta isoform OS=Drosophila melanogaster GN=ttk PE=1 SV=2

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 7/86 (8%)

Query: 10 FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQN-FQVHLA 68
          FC++W N Q +L     QLL  E+  DVTL  EG+  +AH+++LSA SP+F   F  H  
Sbjct: 8  FCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVEGQHLKAHKMVLSACSPYFNTLFVSHPE 67

Query: 69 FELYQLLK------MESMVDVTLKAE 88
               +LK      M+S++D   + E
Sbjct: 68 KHPIVILKDVPYSDMKSLLDFMYRGE 93

Binds to a number of sites in the transcriptional regulatory region of ftz. Isoform beta is required to repress inappropriate segmentation gene transcription and repress genes incompatible with development of photoreceptor cell fates. Probable repressor of the transcription of the segmentation genes ftz, eve, h, odd, run, and en. Inhibits Trl-dependent activation of eve. May bind to the region AGGGC/TGG. Degradation of ttk is directed by binding of sinah or sina, via the adapter molecule phyl which binds to the BTB domain of ttk. A second method of degradation exists that is phyl-independent, this is mediated by recognition of motifs in the C-terminus of ttk.

Drosophila melanogaster (taxid: 7227)

>sp|Q9V5M6|LOLA5_DROME Longitudinals lacking protein, isoforms J/P/Q/S/Z OS=Drosophila melanogaster GN=lola PE=1 SV=4

 Score = 58.9 bits (141), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 11/88 (12%)

Query: 10 FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF-----QNFQ 64
          FC++W N Q  L      LL+ E++VD TL AEG+  +AH+++LSA SP+F     + + 
Sbjct: 7  FCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYD 66

Query: 65 VHLAFEL----YQLLKMESMVDVTLKAE 88
           H  F L    YQ L+  +M+D   + E
Sbjct: 67 KHPIFILKDVKYQELR--AMMDYMYRGE 92

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|Q7KQZ4|LOLA3_DROME Longitudinals lacking protein, isoforms A/B/D/L OS=Drosophila melanogaster GN=lola PE=1 SV=1

 Score = 58.9 bits (141), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 11/88 (12%)

Query: 10 FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF-----QNFQ 64
          FC++W N Q  L      LL+ E++VD TL AEG+  +AH+++LSA SP+F     + + 
Sbjct: 7  FCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYD 66

Query: 65 VHLAFEL----YQLLKMESMVDVTLKAE 88
           H  F L    YQ L+  +M+D   + E
Sbjct: 67 KHPIFILKDVKYQELR--AMMDYMYRGE 92

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|P42282|TTKA_DROME Protein tramtrack, alpha isoform OS=Drosophila melanogaster GN=ttk PE=1 SV=3

 Score = 58.9 bits (141), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 7/86 (8%)

Query: 10 FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQN-FQVHLA 68
          FC++W N Q +L     QLL  E+  DVTL  EG+  +AH+++LSA SP+F   F  H  
Sbjct: 8  FCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVEGQHLKAHKMVLSACSPYFNTLFVSHPE 67

Query: 69 FELYQLLK------MESMVDVTLKAE 88
               +LK      M+S++D   + E
Sbjct: 68 KHPIVILKDVPYSDMKSLLDFMYRGE 93

Binds to a number of sites in the transcriptional regulatory region of ftz. Isoform alpha is required to repress genes that promote the R7 cell fate. Probable repressor of the transcription of the segmentation genes ftz, eve, h, odd, run, and en. May bind to the region 5'-AGGG[CT]GG-3'. Degradation of ttk is directed by binding of sinah or sina, via the adapter molecule phyl which binds to the BTB domain of ttk.

Drosophila melanogaster (taxid: 7227)

>sp|Q01295|BRC1_DROME Broad-complex core protein isoforms 1/2/3/4/5 OS=Drosophila melanogaster GN=br PE=1 SV=2

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/55 (41%), Positives = 35/55 (63%)

Query: 9  NFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF 63
          +FC++W N+Q  +      L   E+ VDVTL  EG + +AHR++LSA SP+F+  
Sbjct: 6  HFCLRWNNYQSSITSAFENLRDDEAFVDVTLACEGRSIKAHRVVLSACSPYFREL 60

Broad-complex proteins are required for puffing and transcription of salivary gland late genes during metamorphosis.

Drosophila melanogaster (taxid: 7227)

>sp|P42283|LOLA1_DROME Longitudinals lacking protein, isoform G OS=Drosophila melanogaster GN=lola PE=1 SV=2

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 11/88 (12%)

Query: 10 FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF-----QNFQ 64
          FC++W N Q  L      LL+ E++VD TL AEG+  +AH+++LSA SP+F     + + 
Sbjct: 7  FCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYD 66

Query: 65 VHLAFEL----YQLLKMESMVDVTLKAE 88
           H  F L    YQ L+  +M+D   + E
Sbjct: 67 KHPIFILKDVKYQELR--AMMDYMYRGE 92

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|Q867Z4|LOLA4_DROME Longitudinals lacking protein, isoforms F/I/K/T OS=Drosophila melanogaster GN=lola PE=1 SV=1

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 11/88 (12%)

Query: 10 FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF-----QNFQ 64
          FC++W N Q  L      LL+ E++VD TL AEG+  +AH+++LSA SP+F     + + 
Sbjct: 7  FCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYD 66

Query: 65 VHLAFEL----YQLLKMESMVDVTLKAE 88
           H  F L    YQ L+  +M+D   + E
Sbjct: 67 KHPIFILKDVKYQELR--AMMDYMYRGE 92

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	107
195582232	671	GD25965 [Drosophila simulans] gi|1941929	0.906	0.144	0.412	1e-15
242016203	272	bric-A-brac, putative [Pediculus humanus	0.785	0.308	0.417	6e-10
157167331	429	bric-a-brac [Aedes aegypti] gi|108882904	0.560	0.139	0.45	1e-09
241701538	448	zinc finger protein, putative [Ixodes sc	0.485	0.116	0.538	2e-09
442759685	441	Putative bric a brac 2 [Ixodes ricinus]	0.719	0.174	0.435	2e-09
345494983	492	PREDICTED: hypothetical protein LOC10012	0.504	0.109	0.555	2e-09
158295170	1095	AGAP006018-PA [Anopheles gambiae str. PE	0.504	0.049	0.481	2e-09
195336475	575	GM14235 [Drosophila sechellia] gi|194127	0.457	0.085	0.490	2e-09
442629331	1066	bric a brac 2, isoform B [Drosophila mel	0.457	0.045	0.490	2e-09
6634127	1067	BAB-II protein [Drosophila melanogaster]	0.457	0.045	0.490	2e-09

>gi|195582232|ref|XP_002080932.1| GD25965 [Drosophila simulans] gi|194192941|gb|EDX06517.1| GD25965 [Drosophila simulans]

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 12/109 (11%)

Query: 10  FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF--------- 60
           FC++W N Q  L      LL+ E++VD TL AEG+  +AH+++LSA SP+F         
Sbjct: 7   FCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFAMDDDQQFC 66

Query: 61  ---QNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF 106
               N Q  L      LL+ E++VD TL AEG+  +AH+++LSA SP+F
Sbjct: 67  LRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYF 115

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242016203|ref|XP_002428719.1| bric-A-brac, putative [Pediculus humanus corporis] gi|212513396|gb|EEB15981.1| bric-A-brac, putative [Pediculus humanus corporis]

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 7/91 (7%)

Query: 10  FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQN-FQVHLA 68
           F +KW NFQ +LA   + LL+ E+MVDVTL AEG+   AH+IILS  SP+F++ F+V+  
Sbjct: 16  FSLKWNNFQSNLATGFHDLLQEETMVDVTLAAEGKILHAHKIILSVCSPYFKDLFKVNPC 75

Query: 69  FELYQLLK------MESMVDVTLKAEGEAFQ 93
                +LK      M  M+D   + E    Q
Sbjct: 76  QHPIVILKDVGHQEMADMLDFMYRGEANVRQ 106

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157167331|ref|XP_001660259.1| bric-a-brac [Aedes aegypti] gi|108882904|gb|EAT47129.1| AAEL001739-PA [Aedes aegypti]

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/60 (45%), Positives = 41/60 (68%)

Query: 4   ITTGTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF 63
           +T    FC++W N+Q +L     QLL+ ES VDVTL  +G++ +AH+++LSA SP+FQ  
Sbjct: 52  LTPNQQFCLRWNNYQTNLTSVFDQLLQNESFVDVTLACDGKSIKAHKMVLSACSPYFQTL 111

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|241701538|ref|XP_002402860.1| zinc finger protein, putative [Ixodes scapularis] gi|215504895|gb|EEC14389.1| zinc finger protein, putative [Ixodes scapularis]

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/52 (53%), Positives = 37/52 (71%)

Query: 10 FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 61
          FC+KW N Q ++     QLL  E++VDVTL  EG + +AHR++LSA SPFFQ
Sbjct: 6  FCLKWNNHQSNMLVVFEQLLSNEALVDVTLACEGHSLKAHRMVLSACSPFFQ 57

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442759685|gb|JAA72001.1| Putative bric a brac 2 [Ixodes ricinus]

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 1/78 (1%)

Query: 10 FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNFQVHLAF 69
          FC+KW N Q ++     QLL  E++VDVTL  EG + +AHR++LSA SPFFQ   V    
Sbjct: 6  FCLKWNNHQSNMLVVFEQLLSNEALVDVTLACEGHSLKAHRMVLSACSPFFQALFVENPC 65

Query: 70 ELYQLLKMESMVDVTLKA 87
          + + ++ M+ M  + LKA
Sbjct: 66 K-HPIVIMKDMRYMDLKA 82

Source: Ixodes ricinus

Species: Ixodes ricinus

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345494983|ref|XP_001605103.2| PREDICTED: hypothetical protein LOC100121492 [Nasonia vitripennis]

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/54 (55%), Positives = 38/54 (70%)

Query: 8  TNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 61
          T++C KW N+Q HL+  + QLL+ E MVDVTL A GE  QAHR++L A S  FQ
Sbjct: 15 TSYCFKWSNYQSHLSEVVRQLLEEECMVDVTLYAGGERIQAHRLVLCACSTLFQ 68

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158295170|ref|XP_316056.4| AGAP006018-PA [Anopheles gambiae str. PEST] gi|157015906|gb|EAA11698.4| AGAP006018-PA [Anopheles gambiae str. PEST]

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/54 (48%), Positives = 39/54 (72%)

Query: 10  FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF 63
           FC++W N+Q +L     QLL+ ES VDVTL  +G++ +AH+++LSA SP+FQ  
Sbjct: 154 FCLRWNNYQTNLTSVFDQLLQSESFVDVTLACDGQSMKAHKMVLSACSPYFQTL 207

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195336475|ref|XP_002034861.1| GM14235 [Drosophila sechellia] gi|194127954|gb|EDW49997.1| GM14235 [Drosophila sechellia]

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 39/55 (70%)

Query: 7   GTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 61
           G  FC++W N+Q +L     +LL+ ES VDVTL  EG + +AH+++LSA SP+FQ
Sbjct: 195 GQQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYFQ 249

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442629331|ref|NP_001261242.1| bric a brac 2, isoform B [Drosophila melanogaster] gi|440215109|gb|AGB93937.1| bric a brac 2, isoform B [Drosophila melanogaster]

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 39/55 (70%)

Query: 7   GTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 61
           G  FC++W N+Q +L     +LL+ ES VDVTL  EG + +AH+++LSA SP+FQ
Sbjct: 195 GQQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYFQ 249

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|6634127|emb|CAB64388.1| BAB-II protein [Drosophila melanogaster]

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 39/55 (70%)

Query: 7   GTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 61
           G  FC++W N+Q +L     +LL+ ES VDVTL  EG + +AH+++LSA SP+FQ
Sbjct: 195 GQQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYFQ 249

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	107
FB|FBgn0004870	977	bab1 "bric a brac 1" [Drosophi	0.532	0.058	0.438	8.3e-10
FB|FBgn0025525	1067	bab2 "bric a brac 2" [Drosophi	0.514	0.051	0.490	1.2e-09
FB|FBgn0004652	955	fru "fruitless" [Drosophila me	0.738	0.082	0.395	3.2e-08
FB|FBgn0003254	661	rib "ribbon" [Drosophila melan	0.523	0.084	0.428	3.2e-08
FB|FBgn0003870	813	ttk "tramtrack" [Drosophila me	0.738	0.097	0.372	8.8e-08
FB|FBgn0000210	880	br "broad" [Drosophila melanog	0.495	0.060	0.433	1.2e-07
FB|FBgn0264981	1089	mamo "maternal gene required f	0.747	0.073	0.363	1.6e-07
FB|FBgn0005630	970	lola "longitudinals lacking" [	0.738	0.081	0.360	1.8e-07
FB|FBgn0022238	127	lolal "lola like" [Drosophila	0.542	0.456	0.362	2.3e-07
FB|FBgn0052121	648	CG32121 [Drosophila melanogast	0.495	0.081	0.452	3.7e-07

FB|FBgn0004870 bab1 "bric a brac 1" [Drosophila melanogaster (taxid:7227)]

 Score = 144 (55.7 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
 Identities = 25/57 (43%), Positives = 39/57 (68%)

Query:     5 TTGTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 61
             ++   FC++W N+Q +L     QLL+ E  VDVTL  +G + +AH+++LSA SP+FQ
Sbjct:    97 SSSQQFCLRWNNYQTNLTTIFDQLLQNECFVDVTLACDGRSMKAHKMVLSACSPYFQ 153

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;TAS

GO:0006351 "transcription, DNA-dependent" evidence=IEP;ISS

GO:0007548 "sex differentiation" evidence=IGI;IMP;TAS

GO:0048071 "sex-specific pigmentation" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0048092 "negative regulation of male pigmentation" evidence=NAS

GO:0046660 "female sex differentiation" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IGI;IMP

GO:0008585 "female gonad development" evidence=IGI;IMP

GO:0007455 "eye-antennal disc morphogenesis" evidence=IEP

GO:0003677 "DNA binding" evidence=NAS

GO:0048070 "regulation of developmental pigmentation" evidence=TAS

GO:0048086 "negative regulation of developmental pigmentation" evidence=TAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0003680 "AT DNA binding" evidence=IDA

FB|FBgn0025525 bab2 "bric a brac 2" [Drosophila melanogaster (taxid:7227)]

 Score = 153 (58.9 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 27/55 (49%), Positives = 39/55 (70%)

Query:     7 GTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 61
             G  FC++W N+Q +L     +LL+ ES VDVTL  EG + +AH+++LSA SP+FQ
Sbjct:   195 GQQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYFQ 249

GO:0005515 "protein binding" evidence=IPI

GO:0006351 "transcription, DNA-dependent" evidence=IEP

GO:0008585 "female gonad development" evidence=IGI;IMP

GO:0005634 "nucleus" evidence=IDA;TAS

GO:0007455 "eye-antennal disc morphogenesis" evidence=ISS

GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IGI;IMP

GO:0003677 "DNA binding" evidence=NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=TAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005700 "polytene chromosome" evidence=IDA

GO:0003680 "AT DNA binding" evidence=IDA

GO:0005701 "polytene chromosome chromocenter" evidence=IDA

FB|FBgn0004652 fru "fruitless" [Drosophila melanogaster (taxid:7227)]

 Score = 139 (54.0 bits), Expect = 3.2e-08, P = 3.2e-08
 Identities = 34/86 (39%), Positives = 47/86 (54%)

Query:    10 FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF-----QNFQ 64
             FC++W N   +L   L  LL+ E++ DVTL  EGE  +AH+ ILSA SP+F     QN  
Sbjct:   106 FCLRWNNHPTNLTGVLTSLLQREALCDVTLACEGETVKAHQTILSACSPYFETIFLQNQH 165

Query:    65 VHLAFELYQLL--KMESMVDVTLKAE 88
              H    L  +   +M S++D   K E
Sbjct:   166 PHPIIYLKDVRYSEMRSLLDFMYKGE 191

GO:0016545 "male courtship behavior, veined wing vibration" evidence=IMP

GO:0008049 "male courtship behavior" evidence=NAS;IMP;TAS

GO:0007618 "mating" evidence=IMP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=NAS;TAS

GO:0045433 "male courtship behavior, veined wing generated song production" evidence=IMP;TAS

GO:0007517 "muscle organ development" evidence=IMP

GO:0007530 "sex determination" evidence=IMP;TAS

GO:0007275 "multicellular organismal development" evidence=IMP

GO:0005634 "nucleus" evidence=NAS

GO:0007617 "mating behavior" evidence=IMP

GO:0016543 "male courtship behavior, orientation prior to leg tapping and wing vibration" evidence=NAS

GO:0007620 "copulation" evidence=NAS;TAS

GO:0007417 "central nervous system development" evidence=IMP;TAS

GO:0046661 "male sex differentiation" evidence=TAS

GO:0048047 "mating behavior, sex discrimination" evidence=IGI;IMP;TAS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0002118 "aggressive behavior" evidence=IMP

GO:0016199 "axon midline choice point recognition" evidence=IMP

GO:0048813 "dendrite morphogenesis" evidence=IMP

FB|FBgn0003254 rib "ribbon" [Drosophila melanogaster (taxid:7227)]

 Score = 137 (53.3 bits), Expect = 3.2e-08, P = 3.2e-08
 Identities = 24/56 (42%), Positives = 39/56 (69%)

Query:     7 GTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQN 62
             G  +C++W N Q +L   L+ L ++ S VD +L  + E FQAHR++L+A+SP+FQ+
Sbjct:    15 GQTYCLRWNNHQTNLVQILHALHEVGSYVDCSLVVDDEQFQAHRVVLAANSPYFQH 70

GO:0008258 "head involution" evidence=IMP

GO:0007417 "central nervous system development" evidence=IMP

GO:0035297 "regulation of Malpighian tubule diameter" evidence=IMP

GO:0007435 "salivary gland morphogenesis" evidence=NAS;IMP

GO:0007442 "hindgut morphogenesis" evidence=IMP

GO:0008360 "regulation of cell shape" evidence=IMP;TAS

GO:0007443 "Malpighian tubule morphogenesis" evidence=IMP

GO:0007424 "open tracheal system development" evidence=NAS;IMP;TAS

GO:0008104 "protein localization" evidence=IMP

GO:0007391 "dorsal closure" evidence=NAS;IMP;TAS

GO:0007427 "epithelial cell migration, open tracheal system" evidence=IMP

GO:0016477 "cell migration" evidence=TAS

GO:0005634 "nucleus" evidence=IDA;NAS;TAS

GO:0007010 "cytoskeleton organization" evidence=TAS

GO:0003677 "DNA binding" evidence=IEA;NAS

GO:0007431 "salivary gland development" evidence=TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=TAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0016044 "cellular membrane organization" evidence=TAS

GO:0007428 "primary branching, open tracheal system" evidence=TAS

GO:0035149 "lumen formation, open tracheal system" evidence=TAS

GO:0045197 "establishment or maintenance of epithelial cell apical/basal polarity" evidence=IMP

GO:0007426 "tracheal outgrowth, open tracheal system" evidence=IMP

GO:0008406 "gonad development" evidence=IMP

FB|FBgn0003870 ttk "tramtrack" [Drosophila melanogaster (taxid:7227)]

 Score = 134 (52.2 bits), Expect = 8.8e-08, P = 8.8e-08
 Identities = 32/86 (37%), Positives = 47/86 (54%)

Query:    10 FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQN-FQVHLA 68
             FC++W N Q +L     QLL  E+  DVTL  EG+  +AH+++LSA SP+F   F  H  
Sbjct:     8 FCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVEGQHLKAHKMVLSACSPYFNTLFVSHPE 67

Query:    69 FELYQLLK------MESMVDVTLKAE 88
                  +LK      M+S++D   + E
Sbjct:    68 KHPIVILKDVPYSDMKSLLDFMYRGE 93

GO:0000978 "RNA polymerase II core promoter proximal region sequence-specific DNA binding" evidence=IDA

GO:0005634 "nucleus" evidence=NAS;IDA

GO:0007422 "peripheral nervous system development" evidence=TAS

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=NAS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0000980 "RNA polymerase II distal enhancer sequence-specific DNA binding" evidence=IDA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=NAS

GO:0045467 "R7 cell development" evidence=IMP;TAS

GO:0005700 "polytene chromosome" evidence=IDA

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

GO:0046843 "dorsal appendage formation" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0001709 "cell fate determination" evidence=TAS

GO:0017053 "transcriptional repressor complex" evidence=IPI

GO:0003682 "chromatin binding" evidence=IDA

GO:0001078 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0030707 "ovarian follicle cell development" evidence=IMP

GO:0007298 "border follicle cell migration" evidence=IMP

GO:0048813 "dendrite morphogenesis" evidence=IMP

GO:0048666 "neuron development" evidence=IMP

GO:0035001 "dorsal trunk growth, open tracheal system" evidence=IMP

GO:0060446 "branching involved in open tracheal system development" evidence=IMP

GO:0016476 "regulation of embryonic cell shape" evidence=IMP

GO:0035151 "regulation of tube size, open tracheal system" evidence=IMP

GO:0040003 "chitin-based cuticle development" evidence=IMP

GO:0035147 "branch fusion, open tracheal system" evidence=IMP

GO:0007426 "tracheal outgrowth, open tracheal system" evidence=IMP

GO:0001964 "startle response" evidence=IMP

GO:0031987 "locomotion involved in locomotory behavior" evidence=IMP

GO:0048854 "brain morphogenesis" evidence=IMP

GO:0002121 "inter-male aggressive behavior" evidence=IMP

GO:0008360 "regulation of cell shape" evidence=IMP

GO:0042675 "compound eye cone cell differentiation" evidence=IMP

GO:0048053 "R1/R6 development" evidence=IMP

GO:0048750 "compound eye corneal lens morphogenesis" evidence=IMP

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

FB|FBgn0000210 br "broad" [Drosophila melanogaster (taxid:7227)]

 Score = 133 (51.9 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 23/53 (43%), Positives = 35/53 (66%)

Query:     9 NFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 61
             +FC++W N+Q  +      L   E+ VDVTL  EG + +AHR++LSA SP+F+
Sbjct:     6 HFCLRWNNYQSSITSAFENLRDDEAFVDVTLACEGRSIKAHRVVLSACSPYFR 58

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IDA

GO:0007458 "progression of morphogenetic furrow involved in compound eye morphogenesis" evidence=IMP

GO:0005634 "nucleus" evidence=IDA;NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=NAS;TAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=NAS

GO:0007552 "metamorphosis" evidence=NAS;TAS

GO:0035071 "salivary gland cell autophagic cell death" evidence=NAS

GO:0035070 "salivary gland histolysis" evidence=NAS;IMP

GO:0001752 "compound eye photoreceptor fate commitment" evidence=IMP

GO:0035072 "ecdysone-mediated induction of salivary gland cell autophagic cell death" evidence=NAS

GO:0006914 "autophagy" evidence=IMP

GO:0008219 "cell death" evidence=TAS

GO:0040034 "regulation of development, heterochronic" evidence=IMP;TAS

GO:0009608 "response to symbiont" evidence=IMP

GO:0035075 "response to ecdysone" evidence=IMP

GO:0035193 "larval central nervous system remodeling" evidence=IMP

GO:0003677 "DNA binding" evidence=IDA

GO:0007562 "eclosion" evidence=IEP

GO:0071390 "cellular response to ecdysone" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IGI

GO:0048477 "oogenesis" evidence=IMP

GO:0048808 "male genitalia morphogenesis" evidence=IMP

GO:0010629 "negative regulation of gene expression" evidence=IMP

FB|FBgn0264981 mamo "maternal gene required for meiosis" [Drosophila melanogaster (taxid:7227)]

 Score = 133 (51.9 bits), Expect = 1.6e-07, P = 1.6e-07
 Identities = 32/88 (36%), Positives = 54/88 (61%)

Query:     9 NFCMKWQNFQVHLAFELYQLLKMESMVDVTLK-AEGEAFQAHRIILSASSPFFQN-FQVH 66
             ++C++W N+Q +L     QLL+  S+VDVTL  +EG + +AH+++LSA S +FQ+ F  H
Sbjct:     5 HYCLRWNNYQSNLLGVFSQLLQDGSLVDVTLVCSEGTSIRAHKVVLSACSSYFQSLFLEH 64

Query:    67 LAFELYQLLK------MESMVDVTLKAE 88
                 L  +LK      ++++V+   K E
Sbjct:    65 PEGHLIVILKDVRFAELQTLVEFMYKGE 92

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0003676 "nucleic acid binding" evidence=IEA;ISS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0035041 "sperm chromatin decondensation" evidence=IMP

GO:0007143 "female meiosis" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0007276 "gamete generation" evidence=IMP

FB|FBgn0005630 lola "longitudinals lacking" [Drosophila melanogaster (taxid:7227)]

 Score = 132 (51.5 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 31/86 (36%), Positives = 48/86 (55%)

Query:    10 FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF-----QNFQ 64
             FC++W N Q  L      LL+ E++VD TL AEG+  +AH+++LSA SP+F     + + 
Sbjct:     7 FCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYD 66

Query:    65 VHLAFELYQLLKME--SMVDVTLKAE 88
              H  F L  +   E  +M+D   + E
Sbjct:    67 KHPIFILKDVKYQELRAMMDYMYRGE 92

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS

GO:0007411 "axon guidance" evidence=IGI;NAS;IMP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0007409 "axonogenesis" evidence=IMP

GO:0005634 "nucleus" evidence=NAS;IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=NAS

GO:0016199 "axon midline choice point recognition" evidence=IGI;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0019730 "antimicrobial humoral response" evidence=IMP

GO:0045476 "nurse cell apoptotic process" evidence=IMP

GO:0045467 "R7 cell development" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP

GO:0007464 "R3/R4 cell fate commitment" evidence=IMP

GO:0048854 "brain morphogenesis" evidence=IMP

GO:0031987 "locomotion involved in locomotory behavior" evidence=IMP

GO:0001964 "startle response" evidence=IMP

GO:0002121 "inter-male aggressive behavior" evidence=IMP

GO:0008406 "gonad development" evidence=IMP

GO:0022008 "neurogenesis" evidence=IMP

FB|FBgn0022238 lolal "lola like" [Drosophila melanogaster (taxid:7227)]

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 21/58 (36%), Positives = 36/58 (62%)

Query:     4 ITTGTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 61
             +++   F +KW +FQ ++      L   +S  DVTL  EG+  +AH+++LSA SP+F+
Sbjct:     2 MSSDQQFFLKWNDFQTNMVTSFRHLRDEKSFTDVTLACEGQTCKAHKMVLSACSPYFK 59

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0006342 "chromatin silencing" evidence=IMP

GO:0016458 "gene silencing" evidence=IMP

GO:0031519 "PcG protein complex" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

GO:0007426 "tracheal outgrowth, open tracheal system" evidence=IMP

GO:0007435 "salivary gland morphogenesis" evidence=IMP

FB|FBgn0052121 CG32121 [Drosophila melanogaster (taxid:7227)]

 Score = 127 (49.8 bits), Expect = 3.7e-07, P = 3.7e-07
 Identities = 24/53 (45%), Positives = 32/53 (60%)

Query:    10 FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQN 62
             FC++W N Q  L   L  LL    + DVT+ AEG   +AHR++LSA S FF +
Sbjct:    30 FCLRWHNHQTSLLSTLPILLDQSHLTDVTISAEGRQLRAHRVVLSACSSFFMD 82

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	107
pfam00651	101	pfam00651, BTB, BTB/POZ domain	8e-08
pfam00651	101	pfam00651, BTB, BTB/POZ domain	1e-07
smart00225	97	smart00225, BTB, Broad-Complex, Tramtrack and Bric	4e-05
smart00225	97	smart00225, BTB, Broad-Complex, Tramtrack and Bric	5e-05

>gnl|CDD|216043 pfam00651, BTB, BTB/POZ domain

 Score = 46.1 bits (110), Expect = 8e-08
 Identities = 14/38 (36%), Positives = 23/38 (60%)

Query: 25 LYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQN 62
          L +L +   + DVTL    + F AH+ +L+A SP+F+ 
Sbjct: 1  LNELRENGELCDVTLVVGDKEFHAHKAVLAACSPYFKA 38

The BTB (for BR-C, ttk and bab) or POZ (for Pox virus and Zinc finger) domain is present near the N-terminus of a fraction of zinc finger (pfam00096) proteins and in proteins that contain the pfam01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT. The POZ or BTB domain is also known as BR-C/Ttk or ZiN. Length = 101

>gnl|CDD|216043 pfam00651, BTB, BTB/POZ domain

 Score = 45.7 bits (109), Expect = 1e-07
 Identities = 14/37 (37%), Positives = 23/37 (62%)

Query: 71  LYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107
           L +L +   + DVTL    + F AH+ +L+A SP+F+
Sbjct: 1   LNELRENGELCDVTLVVGDKEFHAHKAVLAACSPYFK 37

The BTB (for BR-C, ttk and bab) or POZ (for Pox virus and Zinc finger) domain is present near the N-terminus of a fraction of zinc finger (pfam00096) proteins and in proteins that contain the pfam01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT. The POZ or BTB domain is also known as BR-C/Ttk or ZiN. Length = 101

>gnl|CDD|197585 smart00225, BTB, Broad-Complex, Tramtrack and Bric a brac

 Score = 38.8 bits (91), Expect = 4e-05
 Identities = 13/27 (48%), Positives = 19/27 (70%)

Query: 36 DVTLKAEGEAFQAHRIILSASSPFFQN 62
          DVTL   G+ F AH+ +L+A SP+F+ 
Sbjct: 1  DVTLVVGGKKFHAHKAVLAAHSPYFKA 27

Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures. Length = 97

>gnl|CDD|197585 smart00225, BTB, Broad-Complex, Tramtrack and Bric a brac

 Score = 38.4 bits (90), Expect = 5e-05
 Identities = 13/26 (50%), Positives = 19/26 (73%)

Query: 82  DVTLKAEGEAFQAHRIILSASSPFFQ 107
           DVTL   G+ F AH+ +L+A SP+F+
Sbjct: 1   DVTLVVGGKKFHAHKAVLAAHSPYFK 26

Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures. Length = 97

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	107
KOG4441|consensus	571		99.21
PHA02713	557	hypothetical protein; Provisional	99.15
PHA02713	557	hypothetical protein; Provisional	98.9
KOG4441|consensus	571		98.79
KOG0783|consensus	1267		98.53
PHA02790	480	Kelch-like protein; Provisional	98.52
PF00651	111	BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (	98.49
PF00651	111	BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (	98.47
PHA02790	480	Kelch-like protein; Provisional	98.46
KOG4350|consensus	620		98.39
KOG2838|consensus	401		98.35
KOG4350|consensus	620		98.32
PHA03098	534	kelch-like protein; Provisional	98.16
PHA03098	534	kelch-like protein; Provisional	98.13
KOG4591|consensus	280		97.61
KOG2838|consensus	401		97.35
smart00225	90	BTB Broad-Complex, Tramtrack and Bric a brac. Doma	97.22
KOG4591|consensus	280		97.17
KOG0783|consensus	1267		96.66
KOG2075|consensus	521		95.92
KOG0511|consensus	516		95.75
KOG0511|consensus	516		94.88
KOG2075|consensus	521		93.24

>KOG4441|consensus

Probab=99.21  E-value=1.2e-11  Score=92.33  Aligned_cols=61  Identities=26%  Similarity=0.338  Sum_probs=56.4

Q ss_pred             cccCCceEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932          3 AITTGTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      +........+..+.|...+++.|+.+|+++.+|||++.+++++|+|||.||+++||||++|
T Consensus         5 ~~~~~~~~~~~~~~h~~~~l~~l~~lr~~~~lcDv~L~v~~~~~~aHR~VLAa~S~YFraM   65 (571)
T KOG4441|consen    5 DEIFNSTSEFTDPSHSKFLLQGLNELREEGLLCDVTLLVGDREFPAHRVVLAACSPYFRAM   65 (571)
T ss_pred             ccccccccccccHHHHHHHHHHHHHHHHhCCCceEEEEECCeeechHHHHHHhccHHHHHH
Confidence            3445566788999999999999999999999999999999999999999999999999998

>PHA02713 hypothetical protein; Provisional

Probab=99.15  E-value=1.7e-11  Score=91.28  Aligned_cols=52  Identities=25%  Similarity=0.439  Sum_probs=48.8

Q ss_pred             EEeCchHHHHHHHHHHHHhCCCeeeEEEEeC-CeEEeecceeeeccCcccccc
Q psy12932         12 MKWQNFQVHLAFELYQLLKMESMVDVTLKAE-GEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus        12 ~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~-~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      +.++.|...+++.|++||.++.+|||++.++ ++.|+|||.||+++|+||++|
T Consensus         3 ~~~~~h~~~~l~~l~~lr~~~~l~DV~L~v~~~~~f~~Hr~vLaa~S~YF~am   55 (557)
T PHA02713          3 IDDIKHNRRVVSNISNLLDDDILCDVIITIGDGEEIKAHKTILAAGSKYFRTL   55 (557)
T ss_pred             cchhhhhHHHHHHHHHHHhCCCCCCEEEEeCCCCEEeehHHHHhhcCHHHHHH
Confidence            3567899999999999999999999999997 899999999999999999998

>PHA02713 hypothetical protein; Provisional

Probab=98.90  E-value=3.2e-10  Score=84.54  Aligned_cols=44  Identities=30%  Similarity=0.525  Sum_probs=40.4

Q ss_pred             chhhHHHHHHHhhhCccccEEEEEC-CeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAE-GEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~-g~~f~~hr~vLaa~s~~f~  107 (107)
                      ...+++.|+.++.++.+|||+|.++ |+.|+|||+||||+|+|||
T Consensus         9 ~~~~l~~l~~lr~~~~l~DV~L~v~~~~~f~~Hr~vLaa~S~YF~   53 (557)
T PHA02713          9 NRRVVSNISNLLDDDILCDVIITIGDGEEIKAHKTILAAGSKYFR   53 (557)
T ss_pred             hHHHHHHHHHHHhCCCCCCEEEEeCCCCEEeehHHHHhhcCHHHH
Confidence            3457789999999999999999997 8999999999999999995

>KOG4441|consensus

Probab=98.79  E-value=9.5e-10  Score=82.26  Aligned_cols=44  Identities=36%  Similarity=0.549  Sum_probs=41.5

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      ...+++.|+.+++.+.+|||++.+++++|+|||+||||+|||||
T Consensus        20 ~~~~l~~l~~lr~~~~lcDv~L~v~~~~~~aHR~VLAa~S~YFr   63 (571)
T KOG4441|consen   20 SKFLLQGLNELREEGLLCDVTLLVGDREFPAHRVVLAACSPYFR   63 (571)
T ss_pred             HHHHHHHHHHHHHhCCCceEEEEECCeeechHHHHHHhccHHHH
Confidence            55678899999999999999999999999999999999999996

>KOG0783|consensus

Probab=98.53  E-value=1.1e-07  Score=73.03  Aligned_cols=43  Identities=33%  Similarity=0.487  Sum_probs=35.0

Q ss_pred             HHHHHHHHHhC----CCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932         21 LAFELYQLLKM----ESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus        21 ~~~~l~~l~~~----~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      +...+..|..+    +.+.|||+.||+..|+|||.|++++|++|+.+
T Consensus       541 fe~sf~kLl~e~~~~ds~hDVtf~vg~~~F~aHKfIl~~rs~flrkL  587 (1267)
T KOG0783|consen  541 FEGSFPKLLSEENYKDSFHDVTFYVGTSMFHAHKFILCARSSFLRKL  587 (1267)
T ss_pred             chhhhHHHhhccccccccceEEEEecCeecccceEEEEeccHHHHHH
Confidence            34445555533    57889999999999999999999999998876

>PHA02790 Kelch-like protein; Provisional

Probab=98.52  E-value=2.4e-08  Score=73.43  Aligned_cols=39  Identities=18%  Similarity=0.295  Sum_probs=33.4

Q ss_pred             HHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         68 AFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        68 ~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      ...+..++.++.+|||++.+ |++|+|||+||||+|||||
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~-~~~~~~HR~VLAa~S~YFr   48 (480)
T PHA02790         10 CKNILALSMTKKFKTIIEAI-GGNIIVNSTILKKLSPYFR   48 (480)
T ss_pred             hhhHHHHHhhhhhceEEEEc-CcEEeeehhhhhhcCHHHH
Confidence            34567788899999987766 6799999999999999996

>PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins

Probab=98.49  E-value=4e-08  Score=58.25  Aligned_cols=39  Identities=38%  Similarity=0.737  Sum_probs=33.6

Q ss_pred             HHHHHhCCCeeeEEEEeC-CeEEeecceeeeccCcccccc
Q psy12932         25 LYQLLKMESMVDVTLKAE-GEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus        25 l~~l~~~~~~~Dv~~~~~-~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      |+++++.+.++|+++.++ +..+++||.+|+++|+||+.+
T Consensus         1 ~~~~~~~~~~~D~~i~v~d~~~~~vhk~iL~~~S~~F~~~   40 (111)
T PF00651_consen    1 LNDLFNSNEFSDVTIRVGDGKTFYVHKNILAARSPYFRNL   40 (111)
T ss_dssp             HHHHHHHTTS--EEEEETTTEEEEE-HHHHHHHBHHHHHH
T ss_pred             ChHHHcCCCCCCEEEEECCCEEEeechhhhhccchhhhhc
Confidence            578899999999999999 799999999999999999877

The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation []. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule []. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [, , ]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.; GO: 0005515 protein binding; PDB: 3M5B_A 1R28_B 3LBZ_A 3E4U_F 3BIM_B 1R2B_A 1R29_A 2VPK_A 2YY9_B 3GA1_A ....

>PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins

Probab=98.47  E-value=1.5e-08  Score=60.07  Aligned_cols=37  Identities=38%  Similarity=0.724  Sum_probs=31.5

Q ss_pred             HHHHhhhCccccEEEEEC-CeEEeeeeEEEeccCCCCC
Q psy12932         71 LYQLLKMESMVDVTLKAE-GEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        71 l~~l~~~~~~~Dv~l~~~-g~~f~~hr~vLaa~s~~f~  107 (107)
                      |++++.++.++|+++.++ +..|++||.+|+++|+||+
T Consensus         1 ~~~~~~~~~~~D~~i~v~d~~~~~vhk~iL~~~S~~F~   38 (111)
T PF00651_consen    1 LNDLFNSNEFSDVTIRVGDGKTFYVHKNILAARSPYFR   38 (111)
T ss_dssp             HHHHHHHTTS--EEEEETTTEEEEE-HHHHHHHBHHHH
T ss_pred             ChHHHcCCCCCCEEEEECCCEEEeechhhhhccchhhh
Confidence            567889999999999999 8999999999999999984

The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation []. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule []. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [, , ]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.; GO: 0005515 protein binding; PDB: 3M5B_A 1R28_B 3LBZ_A 3E4U_F 3BIM_B 1R2B_A 1R29_A 2VPK_A 2YY9_B 3GA1_A ....

>PHA02790 Kelch-like protein; Provisional

Probab=98.46  E-value=7.4e-08  Score=70.85  Aligned_cols=41  Identities=17%  Similarity=0.269  Sum_probs=35.7

Q ss_pred             HHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932         22 AFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus        22 ~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      .+.+-.|+..+.+|||++. .|+.|+|||+||+++||||++|
T Consensus        10 ~~~~~~~~~~~~~~~~~~~-~~~~~~~HR~VLAa~S~YFraM   50 (480)
T PHA02790         10 CKNILALSMTKKFKTIIEA-IGGNIIVNSTILKKLSPYFRTH   50 (480)
T ss_pred             hhhHHHHHhhhhhceEEEE-cCcEEeeehhhhhhcCHHHHHH
Confidence            4556788999999999884 5558999999999999999998

>KOG4350|consensus

Probab=98.39  E-value=4.4e-08  Score=70.18  Aligned_cols=43  Identities=35%  Similarity=0.564  Sum_probs=39.5

Q ss_pred             hhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         65 VHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        65 ~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      .++.+++.++.-+..+.||+|.++.+.|+|||+||||+|.|||
T Consensus        29 ~~fS~~~~~l~~~e~y~DVtfvve~~rfpAHRvILAaRs~yFR   71 (620)
T KOG4350|consen   29 NNFSQSFDELFTSEDYSDVTFVVEDTRFPAHRVILAARSSYFR   71 (620)
T ss_pred             cchhHHHHHHhhcCcccceEEEEeccccchhhhhHHHHHHHHH
Confidence            3456779999999999999999999999999999999999996

>KOG2838|consensus

Probab=98.35  E-value=3.5e-08  Score=67.49  Aligned_cols=47  Identities=21%  Similarity=0.292  Sum_probs=39.9

Q ss_pred             hHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932         17 FQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus        17 ~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      ....+++++..+++-....|+.+......|++||++++++.|+|+.+
T Consensus       113 ea~sf~kD~ad~ye~k~c~dldiiFkeTcfpahRA~laaRCpffK~l  159 (401)
T KOG2838|consen  113 EANSFLKDFADGYERKVCGDLDIIFKETCFPAHRAFLAARCPFFKIL  159 (401)
T ss_pred             chhHHHHHHhhhhheeeeccceeeeeeccchHHHHHHHhhCcchhhh
Confidence            34567778888887778889999999999999999999999998765

>KOG4350|consensus

Probab=98.32  E-value=1.8e-07  Score=67.09  Aligned_cols=46  Identities=33%  Similarity=0.541  Sum_probs=42.9

Q ss_pred             HHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932         18 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus        18 ~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      ..++.+.+.++..+....||++.+++..|+|||+||+++|.||+++
T Consensus        28 ~~~fS~~~~~l~~~e~y~DVtfvve~~rfpAHRvILAaRs~yFRAl   73 (620)
T KOG4350|consen   28 SNNFSQSFDELFTSEDYSDVTFVVEDTRFPAHRVILAARSSYFRAL   73 (620)
T ss_pred             ccchhHHHHHHhhcCcccceEEEEeccccchhhhhHHHHHHHHHHH
Confidence            4566788999999999999999999999999999999999999998

>PHA03098 kelch-like protein; Provisional

Probab=98.16  E-value=2e-07  Score=69.09  Aligned_cols=31  Identities=32%  Similarity=0.632  Sum_probs=29.3

Q ss_pred             hCccccEEEEE--CCeEEeeeeEEEeccCCCCC
Q psy12932         77 MESMVDVTLKA--EGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        77 ~~~~~Dv~l~~--~g~~f~~hr~vLaa~s~~f~  107 (107)
                      ++.+|||++.+  +|+.|+|||.||+++|+||+
T Consensus         6 ~~~~~Dv~l~~~~~~~~~~~Hk~vLaa~S~yF~   38 (534)
T PHA03098          6 LQKFCDESIIIVNGGGIIKVHKIILSSSSEYFK   38 (534)
T ss_pred             cCCCCCEEEEEEcCCEEEEeHHHHHHhhhHHHH
Confidence            78899999998  99999999999999999995

>PHA03098 kelch-like protein; Provisional

Probab=98.13  E-value=7.3e-07  Score=66.09  Aligned_cols=33  Identities=30%  Similarity=0.618  Sum_probs=31.5

Q ss_pred             CCCeeeEEEEe--CCeEEeecceeeeccCcccccc
Q psy12932         31 MESMVDVTLKA--EGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus        31 ~~~~~Dv~~~~--~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      ++.+|||++.+  +++.|+|||.||+++|+||++|
T Consensus         6 ~~~~~Dv~l~~~~~~~~~~~Hk~vLaa~S~yF~~m   40 (534)
T PHA03098          6 LQKFCDESIIIVNGGGIIKVHKIILSSSSEYFKKM   40 (534)
T ss_pred             cCCCCCEEEEEEcCCEEEEeHHHHHHhhhHHHHHH
Confidence            78899999998  9999999999999999999987

>KOG4591|consensus

Probab=97.61  E-value=3.8e-05  Score=50.71  Aligned_cols=48  Identities=29%  Similarity=0.434  Sum_probs=42.9

Q ss_pred             eCchHHHHHHHHHHHHhCCCeeeEEEEeCC---eEEeecceeeeccCcccc
Q psy12932         14 WQNFQVHLAFELYQLLKMESMVDVTLKAEG---EAFQAHRIILSASSPFFQ   61 (107)
Q Consensus        14 ~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~---~~~~~h~~vl~~~s~~f~   61 (107)
                      ..+++++++.--..|++..+++|++++++|   +.++|||.|++++|++++
T Consensus        46 ~dSF~SRLLaitadL~Ek~qfSDlk~K~~gns~k~i~AHKfVLAARsD~Wk   96 (280)
T KOG4591|consen   46 PDSFISRLLAITADLLEKEQFSDLKFKFAGNSDKHIPAHKFVLAARSDFWK   96 (280)
T ss_pred             chhHHHHHHHHHHHHhhcccccceeEEecCCccccCchhhhhhhhhcchhh
Confidence            457889999999999999999999999984   668999999999999864

>KOG2838|consensus

Probab=97.35  E-value=4.9e-06  Score=57.19  Aligned_cols=90  Identities=16%  Similarity=0.128  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCccccccchhhHHHHHHHhhhCccccEEEEECCeEEeeeeE
Q psy12932         18 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRI   97 (107)
Q Consensus        18 ~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~   97 (107)
                      .....+.+.+|..++.+-|+...++.-+-...-.-+....+.-+.....+..++.+.++.....|+.+......|++||+
T Consensus        68 saDhak~~~ELikgWdVqDlNaLlaEfE~~SaLkEfql~adlaR~ea~sf~kD~ad~ye~k~c~dldiiFkeTcfpahRA  147 (401)
T KOG2838|consen   68 SADHAKPFEELIKGWDVQDLNALLAEFEADSALKEFQLLADLARKEANSFLKDFADGYERKVCGDLDIIFKETCFPAHRA  147 (401)
T ss_pred             chhhhhhHHHHHcCCChhhHHHHHHHHhccHHHHHHHHHHhhcCcchhHHHHHHhhhhheeeeccceeeeeeccchHHHH
Confidence            44556667788888877776665543211100000111111111124567778888888889999999999999999999


Q ss_pred             EEeccCCCCC
Q psy12932         98 ILSASSPFFQ  107 (107)
Q Consensus        98 vLaa~s~~f~  107 (107)
                      +|+++||+|+
T Consensus       148 ~laaRCpffK  157 (401)
T KOG2838|consen  148 FLAARCPFFK  157 (401)
T ss_pred             HHHhhCcchh
Confidence            9999999985

>smart00225 BTB Broad-Complex, Tramtrack and Bric a brac

Probab=97.22  E-value=0.00011  Score=41.05  Aligned_cols=28  Identities=46%  Similarity=0.883  Sum_probs=26.1

Q ss_pred             eEEEEeCCeEEeecceeeeccCcccccc
Q psy12932         36 DVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus        36 Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      |+++.++++.+++||.++++.|+||+.+
T Consensus         1 dv~i~v~~~~~~~h~~iL~~~s~~f~~~   28 (90)
T smart00225        1 DVTLVVGGKKFKAHKAVLAACSPYFKAL   28 (90)
T ss_pred             CeEEEECCEEEehHHHHHhhcCHHHHHH
Confidence            6889999999999999999999999876

Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures.

>KOG4591|consensus

Probab=97.17  E-value=0.00017  Score=47.65  Aligned_cols=43  Identities=30%  Similarity=0.443  Sum_probs=37.8

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECC---eEEeeeeEEEeccCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEG---EAFQAHRIILSASSPFF  106 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g---~~f~~hr~vLaa~s~~f  106 (107)
                      ++.++....++.+...++|+.+.++|   +.+++||.||||||+++
T Consensus        50 ~SRLLaitadL~Ek~qfSDlk~K~~gns~k~i~AHKfVLAARsD~W   95 (280)
T KOG4591|consen   50 ISRLLAITADLLEKEQFSDLKFKFAGNSDKHIPAHKFVLAARSDFW   95 (280)
T ss_pred             HHHHHHHHHHHhhcccccceeEEecCCccccCchhhhhhhhhcchh
Confidence            56677778889999999999999985   67899999999999876

>KOG0783|consensus

Probab=96.66  E-value=0.0012  Score=51.60  Aligned_cols=43  Identities=33%  Similarity=0.471  Sum_probs=33.6

Q ss_pred             hhhHHHHHHHhh----hCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         65 VHLAFELYQLLK----MESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        65 ~~~~~~l~~l~~----~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      +++...+..+..    ...+.||+|.++++.|++||.||+++|++||
T Consensus       539 s~fe~sf~kLl~e~~~~ds~hDVtf~vg~~~F~aHKfIl~~rs~flr  585 (1267)
T KOG0783|consen  539 SNFEGSFPKLLSEENYKDSFHDVTFYVGTSMFHAHKFILCARSSFLR  585 (1267)
T ss_pred             ccchhhhHHHhhccccccccceEEEEecCeecccceEEEEeccHHHH
Confidence            344445555544    3456799999999999999999999999885

>KOG2075|consensus

Probab=95.92  E-value=0.0042  Score=45.79  Aligned_cols=52  Identities=21%  Similarity=0.363  Sum_probs=45.4

Q ss_pred             EEeCchHHHHHHHHHHHHhCCCeeeEEEEeCC-----eEEeecceeeeccCcccccc
Q psy12932         12 MKWQNFQVHLAFELYQLLKMESMVDVTLKAEG-----EAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus        12 ~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~-----~~~~~h~~vl~~~s~~f~~~   63 (107)
                      +-|+.....+......+.++...+|+.+.+++     +.+|+||.+++..|..|.+|
T Consensus        92 ~nwq~~~~t~~er~~~l~~n~~~adv~fivg~~~~~~q~~paHk~vla~gS~VFdaM  148 (521)
T KOG2075|consen   92 PNWQAQKETMRERQAALFNNELLADVHFIVGEEDGGSQRIPAHKLVLADGSDVFDAM  148 (521)
T ss_pred             cccccchhhHHHhhHhhccCcccceeEEEeccCCCcccccchhhhhhhcchHHHHHH
Confidence            44666677888888999999999999999983     67999999999999999988

>KOG0511|consensus

Probab=95.75  E-value=0.00059  Score=49.03  Aligned_cols=75  Identities=21%  Similarity=0.310  Sum_probs=52.8

Q ss_pred             HHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc------------chhhHHHHHHHhhhC---ccccEEEEE-CC
Q psy12932         26 YQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF------------QVHLAFELYQLLKME---SMVDVTLKA-EG   89 (107)
Q Consensus        26 ~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~------------~~~~~~~l~~l~~~~---~~~Dv~l~~-~g   89 (107)
                      .-|+++|..|+      ..+|.+.|+..++-...+|.|            .+....++..+....   ...|+++.+ .|
T Consensus        86 klLLenGAiC~------rdtf~G~RC~YgaLnd~IR~mllsydi~KA~d~~qP~aahi~s~l~dt~l~~~~di~f~~q~g  159 (516)
T KOG0511|consen   86 KLLLENGAICS------RDTFDGDRCHYGALNDRIRRMLLSYDILKAFDARQPPAAHIQSSLRDTFLGCCHDIDFLQQEG  159 (516)
T ss_pred             HHHHHcCCccc------ccccCcchhhhhhhhHHHHHHHHHHHHHHHhhccCCcchHHHHHhhccccccccchHHHhhcc
Confidence            44567888877      667777788888876666655            344455566655433   335777754 67


Q ss_pred             eEEeeeeEEEeccCCCC
Q psy12932         90 EAFQAHRIILSASSPFF  106 (107)
Q Consensus        90 ~~f~~hr~vLaa~s~~f  106 (107)
                      ..|.+|+..|+|+|.+|
T Consensus       160 ~~f~ahkfll~arSs~~  176 (516)
T KOG0511|consen  160 ANFDAHKFLLEARSSNY  176 (516)
T ss_pred             ccccHHHHHHHhhhccc
Confidence            88999999999999876

>KOG0511|consensus

Probab=94.88  E-value=0.00086  Score=48.22  Aligned_cols=55  Identities=40%  Similarity=0.652  Sum_probs=44.2

Q ss_pred             eeEEEEe-CCeEEeecceeeeccCccccccchhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         35 VDVTLKA-EGEAFQAHRIILSASSPFFQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        35 ~Dv~~~~-~~~~~~~h~~vl~~~s~~f~~~~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      .|+++.. .|+.|.||+..++++|.+|...                  ||.+-+.|..+.+||+++.+++|+|+
T Consensus       150 ~di~f~~q~g~~f~ahkfll~arSs~~~~k------------------~v~~~~~~heI~~~~v~~~~f~~flk  205 (516)
T KOG0511|consen  150 HDIDFLQQEGANFDAHKFLLEARSSNYFPK------------------DVMFYVQGHEIEAHRVILSAFSPFLK  205 (516)
T ss_pred             cchHHHhhccccccHHHHHHHhhhcccCch------------------hhhhccccCchhhhhhhHhhhhHHHH
Confidence            4888866 6778899999999988876432                  45566788899999999999998874

>KOG2075|consensus

Probab=93.24  E-value=0.029  Score=41.52  Aligned_cols=43  Identities=21%  Similarity=0.326  Sum_probs=36.5

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECC-----eEEeeeeEEEeccCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEG-----EAFQAHRIILSASSPFF  106 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g-----~~f~~hr~vLaa~s~~f  106 (107)
                      ...+.+....++.+...+|+.+.+++     ..+++||.|||..|.+|
T Consensus        98 ~~t~~er~~~l~~n~~~adv~fivg~~~~~~q~~paHk~vla~gS~VF  145 (521)
T KOG2075|consen   98 KETMRERQAALFNNELLADVHFIVGEEDGGSQRIPAHKLVLADGSDVF  145 (521)
T ss_pred             hhhHHHhhHhhccCcccceeEEEeccCCCcccccchhhhhhhcchHHH
Confidence            34566677888999999999999873     57999999999999887

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	107
1r29_A	127	B-cell lymphoma 6 protein; BTB domain, transcripti	1e-09
1r29_A	127	B-cell lymphoma 6 protein; BTB domain, transcripti	7e-09
2if5_A	120	Zinc finger and BTB domain-containing protein 7A;	1e-09
2if5_A	120	Zinc finger and BTB domain-containing protein 7A;	1e-08
4eoz_A	145	Speckle-type POZ protein; E3 ubiquitin ligase, nuc	1e-09
4eoz_A	145	Speckle-type POZ protein; E3 ubiquitin ligase, nuc	1e-09
3hve_A	256	Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis	2e-09
3hve_A	256	Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis	5e-09
3htm_A	172	Speckle-type POZ protein; BTB, SPOP, ubiquitin, li	5e-09
3htm_A	172	Speckle-type POZ protein; BTB, SPOP, ubiquitin, li	5e-09
3ohu_A	125	Transcription regulator protein BACH2; BTB/POZ dom	6e-09
3ohu_A	125	Transcription regulator protein BACH2; BTB/POZ dom	5e-08
3ga1_A	129	Nucleus accumbens-associated protein 1; BTB/POZ do	1e-08
3ga1_A	129	Nucleus accumbens-associated protein 1; BTB/POZ do	9e-08
2ppi_A	144	Gigaxonin; BTB domain, protein degradation, struct	1e-08
2ppi_A	144	Gigaxonin; BTB domain, protein degradation, struct	1e-08
3b84_A	119	Zinc finger and BTB domain-containing protein 48;	2e-08
3b84_A	119	Zinc finger and BTB domain-containing protein 48;	5e-08
2vpk_A	116	Myoneurin; transcription regulation, transcription	3e-08
2vpk_A	116	Myoneurin; transcription regulation, transcription	3e-08
2z8h_A	138	Transcription regulator protein BACH1; BTB, POZ, d	3e-08
2z8h_A	138	Transcription regulator protein BACH1; BTB, POZ, d	8e-08
2ihc_A	124	Transcription regulator protein BACH1; BRIC-A-BRAC	3e-08
2ihc_A	124	Transcription regulator protein BACH1; BRIC-A-BRAC	1e-07
2yy9_A	135	Zinc finger and BTB domain-containing protein 48;	4e-08
2yy9_A	135	Zinc finger and BTB domain-containing protein 48;	4e-08
2q81_A	119	MIZ-1 protein; BTB/POZ domain, transcription; HET:	4e-08
2q81_A	119	MIZ-1 protein; BTB/POZ domain, transcription; HET:	6e-08
3m5b_A	119	Zinc finger and BTB domain-containing protein 32;	1e-07
3m5b_A	119	Zinc finger and BTB domain-containing protein 32;	1e-07
3fkc_A	116	Transcriptional regulator kaiso; zinc finger and B	1e-07
3fkc_A	116	Transcriptional regulator kaiso; zinc finger and B	1e-07
1buo_A	121	POZ domain, protein (promyelocytic leukemia zinc f	2e-07
1buo_A	121	POZ domain, protein (promyelocytic leukemia zinc f	2e-07
3hqi_A	312	Speckle-type POZ protein; SPOP, ubiquitin, puckere	6e-07
3hqi_A	312	Speckle-type POZ protein; SPOP, ubiquitin, puckere	7e-07
3i3n_A	279	Kelch-like protein 11; structural genomics, BTB, K	7e-07
3i3n_A	279	Kelch-like protein 11; structural genomics, BTB, K	7e-07
2vkp_A	109	BTB/POZ domain-containing protein 6; protein-bindi	3e-06
2vkp_A	109	BTB/POZ domain-containing protein 6; protein-bindi	3e-06

>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A Length = 127

 Score = 50.7 bits (122), Expect = 1e-09
 Identities = 12/52 (23%), Positives = 24/52 (46%)

Query: 9  NFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF 60
          +  +++      +   L +L   + + DV +    E F+AH+ +L A S  F
Sbjct: 4  DSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLF 55

>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A Length = 127

 Score = 48.7 bits (117), Expect = 7e-09
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 54  SASSPF-FQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF 106
           SA S   F      +   L +L   + + DV +    E F+AH+ +L A S  F
Sbjct: 2   SADSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLF 55

>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A Length = 120

 Score = 50.6 bits (122), Expect = 1e-09
 Identities = 12/50 (24%), Positives = 22/50 (44%)

Query: 11 CMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF 60
           + + +    +   L +      + DV +  EG  F  HR +L+A S +F
Sbjct: 2  GIPFPDHSSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYF 51

>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A Length = 120

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 13/47 (27%), Positives = 21/47 (44%)

Query: 60  FQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF 106
           F +    +   L +      + DV +  EG  F  HR +L+A S +F
Sbjct: 5   FPDHSSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYF 51

>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} Length = 145

 Score = 51.0 bits (123), Expect = 1e-09
 Identities = 18/41 (43%), Positives = 22/41 (53%)

Query: 20 HLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF 60
           LA EL  L +     D  L   G+ FQAH+ IL+A SP F
Sbjct: 11 RLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVF 51

>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} Length = 145

 Score = 51.0 bits (123), Expect = 1e-09
 Identities = 18/41 (43%), Positives = 22/41 (53%)

Query: 66  HLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF 106
            LA EL  L +     D  L   G+ FQAH+ IL+A SP F
Sbjct: 11  RLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVF 51

>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B Length = 256

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 11/54 (20%), Positives = 18/54 (33%), Gaps = 1/54 (1%)

Query: 54  SASSPFFQNFQVHLAFE-LYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF 106
           +  S              L    +     D  L  +GE     + IL+A+SP+ 
Sbjct: 4   AEGSAVSDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYI 57

>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B Length = 256

 Score = 50.7 bits (122), Expect = 5e-09
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 24 ELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF 60
           L    +     D  L  +GE     + IL+A+SP+ 
Sbjct: 21 ALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYI 57

>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} Length = 172

 Score = 49.9 bits (120), Expect = 5e-09
 Identities = 15/36 (41%), Positives = 19/36 (52%)

Query: 25 LYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF 60
          L  L +     D  L   G+ FQAH+ IL+A SP F
Sbjct: 25 LGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVF 60

>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} Length = 172

 Score = 49.9 bits (120), Expect = 5e-09
 Identities = 15/36 (41%), Positives = 19/36 (52%)

Query: 71  LYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF 106
           L  L +     D  L   G+ FQAH+ IL+A SP F
Sbjct: 25  LGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVF 60

>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} PDB: 3ohv_A Length = 125

 Score = 48.8 bits (117), Expect = 6e-09
 Identities = 15/52 (28%), Positives = 26/52 (50%)

Query: 10 FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 61
          +  +      ++   L    K + + DVTL  E + F+AHR +L+A S +F 
Sbjct: 8  YVYESTVHCTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFW 59

>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} PDB: 3ohv_A Length = 125

 Score = 46.5 bits (111), Expect = 5e-08
 Identities = 15/37 (40%), Positives = 22/37 (59%)

Query: 71  LYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107
           L    K + + DVTL  E + F+AHR +L+A S +F 
Sbjct: 23  LNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFW 59

>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens} Length = 129

 Score = 48.0 bits (115), Expect = 1e-08
 Identities = 17/57 (29%), Positives = 29/57 (50%)

Query: 5  TTGTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 61
           +     M+  NF   +   L +        DV++  +G AF+AHR +L+ASS +F+
Sbjct: 4  GSAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFR 60

>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens} Length = 129

 Score = 45.7 bits (109), Expect = 9e-08
 Identities = 16/48 (33%), Positives = 26/48 (54%)

Query: 60  FQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107
             NF   +   L +        DV++  +G AF+AHR +L+ASS +F+
Sbjct: 13  IPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFR 60

>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} Length = 144

 Score = 48.5 bits (116), Expect = 1e-08
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 24 ELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF 60
           L    +     D  L  +GE     + IL+A+SP+ 
Sbjct: 37 ALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYI 73

>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} Length = 144

 Score = 48.5 bits (116), Expect = 1e-08
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 70  ELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF 106
            L    +     D  L  +GE     + IL+A+SP+ 
Sbjct: 37  ALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYI 73

>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens} Length = 119

 Score = 47.2 bits (113), Expect = 2e-08
 Identities = 16/50 (32%), Positives = 23/50 (46%)

Query: 12 MKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 61
          M +    V +  EL +  +     D TL   G  F+AH  +L+  S FFQ
Sbjct: 2  MSFVQHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQ 51

>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens} Length = 119

 Score = 46.4 bits (111), Expect = 5e-08
 Identities = 16/48 (33%), Positives = 22/48 (45%)

Query: 60  FQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107
           F    V +  EL +  +     D TL   G  F+AH  +L+  S FFQ
Sbjct: 4   FVQHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQ 51

>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens} Length = 116

 Score = 46.8 bits (112), Expect = 3e-08
 Identities = 12/48 (25%), Positives = 22/48 (45%)

Query: 60  FQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107
             +   HL   L +  +   + D T+      F+AHR +L++ S +F 
Sbjct: 2   MSHHCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFG 49

>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens} Length = 116

 Score = 46.8 bits (112), Expect = 3e-08
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 24 ELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 61
           L +  +   + D T+      F+AHR +L++ S +F 
Sbjct: 12 RLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFG 49

>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus} Length = 138

 Score = 47.3 bits (113), Expect = 3e-08
 Identities = 16/51 (31%), Positives = 27/51 (52%)

Query: 10 FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF 60
          F  +      ++   L    K + + DVT+  EG+ F+AHR +L+A S +F
Sbjct: 12 FAYESSVHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYF 62

>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus} Length = 138

 Score = 46.1 bits (110), Expect = 8e-08
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 71  LYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF 106
           L    K + + DVT+  EG+ F+AHR +L+A S +F
Sbjct: 27  LNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYF 62

>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens} Length = 124

 Score = 46.8 bits (112), Expect = 3e-08
 Identities = 16/51 (31%), Positives = 27/51 (52%)

Query: 10 FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF 60
          F  +      ++   L    K + + DVT+  EG+ F+AHR +L+A S +F
Sbjct: 5  FAYESSVHSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYF 55

>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens} Length = 124

 Score = 45.7 bits (109), Expect = 1e-07
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 71  LYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFF 106
           L    K + + DVT+  EG+ F+AHR +L+A S +F
Sbjct: 20  LNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYF 55

>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} Length = 135

 Score = 46.9 bits (112), Expect = 4e-08
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 24 ELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 61
          EL +  +     D TL   G  F+AH  +L+  S FFQ
Sbjct: 15 ELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQ 52

>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} Length = 135

 Score = 46.9 bits (112), Expect = 4e-08
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 70  ELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107
           EL +  +     D TL   G  F+AH  +L+  S FFQ
Sbjct: 15  ELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQ 52

>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A Length = 119

 Score = 46.5 bits (111), Expect = 4e-08
 Identities = 14/48 (29%), Positives = 26/48 (54%)

Query: 60  FQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107
           F     H+  +L Q  ++  + D T   +G  F+AH+ +L+A S +F+
Sbjct: 7   FPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFK 54

>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A Length = 119

 Score = 46.1 bits (110), Expect = 6e-08
 Identities = 13/50 (26%), Positives = 26/50 (52%)

Query: 12 MKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 61
            +     H+  +L Q  ++  + D T   +G  F+AH+ +L+A S +F+
Sbjct: 5  SDFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFK 54

>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} Length = 119

 Score = 45.3 bits (108), Expect = 1e-07
 Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 2/56 (3%)

Query: 54  SASSPFFQNFQVHLAFELYQLL--KMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107
           S S P  +    + +  L QL      ++ D  +    + F AH ++L+  S    
Sbjct: 2   SMSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLG 57

>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} Length = 119

 Score = 45.0 bits (107), Expect = 1e-07
 Identities = 6/28 (21%), Positives = 12/28 (42%)

Query: 34 MVDVTLKAEGEAFQAHRIILSASSPFFQ 61
          + D  +    + F AH ++L+  S    
Sbjct: 30 LCDTLITVGSQEFPAHSLVLAGVSQQLG 57

>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A Length = 116

 Score = 45.4 bits (108), Expect = 1e-07
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 24 ELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 61
           L +        DVT+  E   F+AH+ ILSASS +F 
Sbjct: 21 SLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFH 58

>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A Length = 116

 Score = 45.4 bits (108), Expect = 1e-07
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 70  ELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107
            L +        DVT+  E   F+AH+ ILSASS +F 
Sbjct: 21  SLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFH 58

>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A Length = 121

 Score = 44.9 bits (107), Expect = 2e-07
 Identities = 10/38 (26%), Positives = 21/38 (55%)

Query: 24 ELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 61
          +  Q+    ++ DV +  + + F AHR +L+ +S  F+
Sbjct: 18 KANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFE 55

>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A Length = 121

 Score = 44.9 bits (107), Expect = 2e-07
 Identities = 10/38 (26%), Positives = 21/38 (55%)

Query: 70  ELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107
           +  Q+    ++ DV +  + + F AHR +L+ +S  F+
Sbjct: 18  KANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFE 55

>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Length = 312

 Score = 44.9 bits (106), Expect = 6e-07
 Identities = 18/53 (33%), Positives = 25/53 (47%)

Query: 55  ASSPFFQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107
            +    +  +  LA EL  L +     D  L   G+ FQAH+ IL+A SP F 
Sbjct: 149 NTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFS 201

>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Length = 312

 Score = 44.9 bits (106), Expect = 7e-07
 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 8/76 (10%)

Query: 21  LAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNFQVHLAFELYQLLKMESM 80
           LA EL  L +     D  L   G+ FQAH+ IL+A SP F              ++    
Sbjct: 161 LADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSA-------MFEHEMEESKK 213

Query: 81  VDVTLK-AEGEAFQAH 95
             V +   E E F+  
Sbjct: 214 NRVEINDVEPEVFKEM 229

>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} Length = 279

 Score = 44.6 bits (106), Expect = 7e-07
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 3/40 (7%)

Query: 24 ELYQLLKMESMVDVTL---KAEGEAFQAHRIILSASSPFF 60
             +  +     D+TL    A G  F+AHR +L+A++ +F
Sbjct: 22 RQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYF 61

>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} Length = 279

 Score = 44.6 bits (106), Expect = 7e-07
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 3/40 (7%)

Query: 70  ELYQLLKMESMVDVTL---KAEGEAFQAHRIILSASSPFF 106
              +  +     D+TL    A G  F+AHR +L+A++ +F
Sbjct: 22  RQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYF 61

>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens} Length = 109

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 9/37 (24%), Positives = 13/37 (35%), Gaps = 4/37 (10%)

Query: 28 LLKMESMVDVTLK----AEGEAFQAHRIILSASSPFF 60
          +   E M DV              AH+ +L+  S  F
Sbjct: 2  MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVF 38

>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens} Length = 109

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 9/37 (24%), Positives = 13/37 (35%), Gaps = 4/37 (10%)

Query: 74  LLKMESMVDVTLK----AEGEAFQAHRIILSASSPFF 106
           +   E M DV              AH+ +L+  S  F
Sbjct: 2   MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVF 38

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	107
3ga1_A	129	Nucleus accumbens-associated protein 1; BTB/POZ do	99.51
3fkc_A	116	Transcriptional regulator kaiso; zinc finger and B	99.5
2ihc_A	124	Transcription regulator protein BACH1; BRIC-A-BRAC	99.49
2z8h_A	138	Transcription regulator protein BACH1; BTB, POZ, d	99.47
3ohu_A	125	Transcription regulator protein BACH2; BTB/POZ dom	99.45
3b84_A	119	Zinc finger and BTB domain-containing protein 48;	99.44
1buo_A	121	POZ domain, protein (promyelocytic leukemia zinc f	99.44
2if5_A	120	Zinc finger and BTB domain-containing protein 7A;	99.41
2q81_A	119	MIZ-1 protein; BTB/POZ domain, transcription; HET:	99.39
1r29_A	127	B-cell lymphoma 6 protein; BTB domain, transcripti	99.39
2yy9_A	135	Zinc finger and BTB domain-containing protein 48;	99.37
2ppi_A	144	Gigaxonin; BTB domain, protein degradation, struct	99.36
2vpk_A	116	Myoneurin; transcription regulation, transcription	99.33
3i3n_A	279	Kelch-like protein 11; structural genomics, BTB, K	99.3
3hve_A	256	Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis	99.29
3m5b_A	119	Zinc finger and BTB domain-containing protein 32;	99.21
3b84_A	119	Zinc finger and BTB domain-containing protein 48;	99.15
2ihc_A	124	Transcription regulator protein BACH1; BRIC-A-BRAC	99.14
2z8h_A	138	Transcription regulator protein BACH1; BTB, POZ, d	99.13
2vpk_A	116	Myoneurin; transcription regulation, transcription	99.13
2q81_A	119	MIZ-1 protein; BTB/POZ domain, transcription; HET:	99.12
1buo_A	121	POZ domain, protein (promyelocytic leukemia zinc f	99.12
3ohu_A	125	Transcription regulator protein BACH2; BTB/POZ dom	99.11
2yy9_A	135	Zinc finger and BTB domain-containing protein 48;	99.11
3fkc_A	116	Transcriptional regulator kaiso; zinc finger and B	99.1
1r29_A	127	B-cell lymphoma 6 protein; BTB domain, transcripti	99.09
2if5_A	120	Zinc finger and BTB domain-containing protein 7A;	99.09
3m5b_A	119	Zinc finger and BTB domain-containing protein 32;	99.08
3ga1_A	129	Nucleus accumbens-associated protein 1; BTB/POZ do	99.05
2ppi_A	144	Gigaxonin; BTB domain, protein degradation, struct	99.05
4eoz_A	145	Speckle-type POZ protein; E3 ubiquitin ligase, nuc	99.03
3htm_A	172	Speckle-type POZ protein; BTB, SPOP, ubiquitin, li	99.03
3i3n_A	279	Kelch-like protein 11; structural genomics, BTB, K	98.99
4eoz_A	145	Speckle-type POZ protein; E3 ubiquitin ligase, nuc	98.96
3htm_A	172	Speckle-type POZ protein; BTB, SPOP, ubiquitin, li	98.89
3hve_A	256	Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis	98.86
3hqi_A	312	Speckle-type POZ protein; SPOP, ubiquitin, puckere	98.83
3hqi_A	312	Speckle-type POZ protein; SPOP, ubiquitin, puckere	98.77
2vkp_A	109	BTB/POZ domain-containing protein 6; protein-bindi	98.74
2vkp_A	109	BTB/POZ domain-containing protein 6; protein-bindi	97.22
4ajy_C	97	Transcription elongation factor B polypeptide 1; E	94.0
2ast_A	159	S-phase kinase-associated protein 1A; SCF-substrat	89.46

>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}

Probab=99.51  E-value=1e-14  Score=88.75  Aligned_cols=62  Identities=27%  Similarity=0.425  Sum_probs=54.7

Q ss_pred             CcccCCceEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932          2 AAITTGTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      |+..+.+.+.++++++...+++.|++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus         1 gp~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~   62 (129)
T 3ga1_A            1 GPLGSAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDL   62 (129)
T ss_dssp             ------CEEEEECTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHH
T ss_pred             CCCCCCceEEeecCcHHHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHH
Confidence            35567789999999999999999999999999999999999999999999999999999877

>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A

Probab=99.50  E-value=1e-14  Score=87.49  Aligned_cols=59  Identities=27%  Similarity=0.307  Sum_probs=54.9

Q ss_pred             cCCceEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932          5 TTGTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      ++++.+.+.+++|...+++.|++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus         2 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~   60 (116)
T 3fkc_A            2 ESRKLISATDIQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQL   60 (116)
T ss_dssp             --CCCCCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred             CcCceeeecCccHHHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHH
Confidence            45678899999999999999999999999999999999999999999999999999887

>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}

Probab=99.49  E-value=1.4e-14  Score=87.61  Aligned_cols=56  Identities=29%  Similarity=0.466  Sum_probs=54.2

Q ss_pred             ceEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932          8 TNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus         8 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      +.+.++++.|+..+++.|++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus         3 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~m   58 (124)
T 2ihc_A            3 SVFAYESSVHSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSR   58 (124)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHH
T ss_pred             ceeeecCcchHHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHH
Confidence            67899999999999999999999999999999999999999999999999999987

>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}

Probab=99.47  E-value=1.3e-14  Score=89.26  Aligned_cols=58  Identities=28%  Similarity=0.448  Sum_probs=55.1

Q ss_pred             CCceEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932          6 TGTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      ..+.+.+.++.|...+++.|++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus         8 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~   65 (138)
T 2z8h_A            8 ESAVFAYESSVHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSR   65 (138)
T ss_dssp             TTCCCCCCCSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred             CCCeeEecCCchHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHH
Confidence            4577889999999999999999999999999999999999999999999999999987

>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A

Probab=99.45  E-value=5.1e-14  Score=85.11  Aligned_cols=58  Identities=26%  Similarity=0.357  Sum_probs=54.9

Q ss_pred             CCceEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932          6 TGTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      ......+++++|...+++.|+++++++.+|||++.++++.|+|||.||+++|+||+++
T Consensus         4 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~   61 (125)
T 3ohu_A            4 GSPMYVYESTVHCTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQA   61 (125)
T ss_dssp             SCCCEEEECSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHH
T ss_pred             CCcceeeecHHHHHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHH
Confidence            3467899999999999999999999999999999999999999999999999999877

>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}

Probab=99.44  E-value=3.9e-14  Score=85.11  Aligned_cols=52  Identities=31%  Similarity=0.451  Sum_probs=49.6

Q ss_pred             EEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932         12 MKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus        12 ~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      ++|++|...+++.|++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus         2 ~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~   53 (119)
T 3b84_A            2 MSFVQHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSL   53 (119)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHH
Confidence            5678999999999999999999999999999999999999999999999877

>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A

Probab=99.44  E-value=4.7e-14  Score=84.93  Aligned_cols=55  Identities=20%  Similarity=0.347  Sum_probs=52.4

Q ss_pred             eEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932          9 NFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus         9 ~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      ...++++.|+..+++.|++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus         3 ~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~   57 (121)
T 1buo_A            3 MIQLQNPSHPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEIL   57 (121)
T ss_dssp             CCCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHH
T ss_pred             ceeccCcchHHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHH
Confidence            4668899999999999999999999999999999999999999999999999977

>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A

Probab=99.41  E-value=1.7e-13  Score=82.26  Aligned_cols=53  Identities=23%  Similarity=0.425  Sum_probs=50.4

Q ss_pred             EEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932         11 CMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus        11 ~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      .++|++|.+.+++.+++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus         2 ~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~   54 (120)
T 2if5_A            2 GIPFPDHSSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKL   54 (120)
T ss_dssp             CCCCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred             CcCccchHHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHH
Confidence            35788999999999999999999999999999999999999999999999877

>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A

Probab=99.39  E-value=1.3e-13  Score=82.85  Aligned_cols=54  Identities=24%  Similarity=0.437  Sum_probs=49.6

Q ss_pred             EEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932         10 FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      ..+.+++|...+++.|++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus         3 ~~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~   56 (119)
T 2q81_A            3 LGSDFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKML   56 (119)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred             cccccchHHHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHH
Confidence            345678899999999999999999999999999999999999999999999987

>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A

Probab=99.39  E-value=9.2e-14  Score=84.19  Aligned_cols=55  Identities=22%  Similarity=0.391  Sum_probs=51.7

Q ss_pred             eEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932          9 NFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus         9 ~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      ...++++.|...+++.|++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus         4 ~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~   58 (127)
T 1r29_A            4 DSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSI   58 (127)
T ss_dssp             -CCCCCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred             CccccchhHHHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHH
Confidence            4567899999999999999999999999999999999999999999999999877

>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}

Probab=99.37  E-value=5.8e-13  Score=81.64  Aligned_cols=51  Identities=29%  Similarity=0.378  Sum_probs=46.9

Q ss_pred             EeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932         13 KWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus        13 ~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      .+++|...+++.|+++++++.+|||++.++++.|+|||.||+++|+||+++
T Consensus         4 ~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~m   54 (135)
T 2yy9_A            4 GSSGHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRI   54 (135)
T ss_dssp             ---CHHHHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHT
T ss_pred             ccccHHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHH
Confidence            467899999999999999999999999999999999999999999999987

>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}

Probab=99.36  E-value=8.7e-14  Score=86.26  Aligned_cols=57  Identities=19%  Similarity=0.267  Sum_probs=51.9

Q ss_pred             CceEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932          7 GTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      -+.+.+.++++...+++.|++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus        20 ~~~~~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~m   76 (144)
T 2ppi_A           20 FQSMAVSDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTK   76 (144)
T ss_dssp             CCCCCCCCTTHHHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred             eeeeeecCcchHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHH
Confidence            356788999999999999999999999999999999999999999999999999977

>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}

Probab=99.33  E-value=2.2e-13  Score=81.33  Aligned_cols=50  Identities=24%  Similarity=0.281  Sum_probs=47.4

Q ss_pred             eCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932         14 WQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus        14 ~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      .++|+..+++.|++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus         2 ~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~   51 (116)
T 2vpk_A            2 MSHHCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAI   51 (116)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred             chhHHHHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHH
Confidence            35789999999999999999999999999999999999999999999876

>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A

Probab=99.30  E-value=2.1e-12  Score=87.41  Aligned_cols=56  Identities=21%  Similarity=0.345  Sum_probs=53.0

Q ss_pred             ceEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeC---CeEEeecceeeeccCcccccc
Q psy12932          8 TNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAE---GEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus         8 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~---~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      +...|.+++|+..+++.|+++|.++.+|||++.++   |+.|+|||.||+++|+||++|
T Consensus         6 ~~~~~~~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~m   64 (279)
T 3i3n_A            6 EAEDFECSSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPL   64 (279)
T ss_dssp             CEEEEECTTHHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGG
T ss_pred             cccCcCCHhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHH
Confidence            57889999999999999999999999999999998   899999999999999999988

>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B

Probab=99.29  E-value=5.1e-13  Score=89.43  Aligned_cols=59  Identities=19%  Similarity=0.267  Sum_probs=48.1

Q ss_pred             cCCceEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932          5 TTGTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      +|++...+.++.|...+++.|++++.++.+|||++.++++.|+|||.||+++|+||++|
T Consensus         2 s~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~m   60 (256)
T 3hve_A            2 SMAEGSAVSDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTK   60 (256)
T ss_dssp             --------CCTTTHHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHT
T ss_pred             CCCCCCccCChHHHHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHH
Confidence            34567889999999999999999999999999999999999999999999999999987

>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0

Probab=99.21  E-value=1.8e-11  Score=73.59  Aligned_cols=68  Identities=15%  Similarity=0.075  Sum_probs=52.8

Q ss_pred             EEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc---------chhhHHHHHHHhhhCc
Q psy12932         10 FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF---------QVHLAFELYQLLKMES   79 (107)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~---------~~~~~~~l~~l~~~~~   79 (107)
                      .....+.+...+++.|+  |.++.+|||++.++++.|+|||.||+++|+||++.         ....++.+-++.+++.
T Consensus         8 ~~~~~~~~~~~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~~~~i~l~~v~~~~f~~ll~fiYtg~   84 (119)
T 3m5b_A            8 IRLPSPYGSDRLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQWALGEGISPSTFAQLLNFVYGES   84 (119)
T ss_dssp             EEECCTTTTCHHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCCCEEEECCSSCCHHHHHHHHHHHTTCC
T ss_pred             CCCCCCcchHHHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhcCCCEEEeCCCCHHHHHHHHHHHcCCC
Confidence            34445667788888886  67799999999999999999999999999999865         3444555555555553

>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}

Probab=99.15  E-value=3.2e-12  Score=76.64  Aligned_cols=44  Identities=34%  Similarity=0.457  Sum_probs=40.9

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      +..+.+.++.++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus         8 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~   51 (119)
T 3b84_A            8 SVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQ   51 (119)
T ss_dssp             HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHH
Confidence            45678889999999999999999999999999999999999985

>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}

Probab=99.14  E-value=3.6e-12  Score=76.92  Aligned_cols=44  Identities=34%  Similarity=0.592  Sum_probs=41.3

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      +..+.+.+++++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus        13 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~   56 (124)
T 2ihc_A           13 STNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFH   56 (124)
T ss_dssp             HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHH
T ss_pred             HHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHH
Confidence            55688899999999999999999999999999999999999985

>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}

Probab=99.13  E-value=4.9e-12  Score=77.65  Aligned_cols=44  Identities=34%  Similarity=0.594  Sum_probs=41.6

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      +..+.+.+..++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus        20 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~   63 (138)
T 2z8h_A           20 STNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFH   63 (138)
T ss_dssp             HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHH
Confidence            56788899999999999999999999999999999999999985

>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}

Probab=99.13  E-value=5.1e-12  Score=75.33  Aligned_cols=44  Identities=27%  Similarity=0.311  Sum_probs=40.7

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      +..+.+.+..++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus         6 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~   49 (116)
T 2vpk_A            6 CEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFG   49 (116)
T ss_dssp             HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHH
Confidence            34678889999999999999999999999999999999999985

>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A

Probab=99.12  E-value=5.5e-12  Score=75.61  Aligned_cols=44  Identities=30%  Similarity=0.514  Sum_probs=41.0

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      ...+.+.+++++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus        11 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~   54 (119)
T 2q81_A           11 SQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFK   54 (119)
T ss_dssp             HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHH
Confidence            45678889999999999999999999999999999999999985

>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A

Probab=99.12  E-value=5.1e-12  Score=75.94  Aligned_cols=44  Identities=25%  Similarity=0.457  Sum_probs=41.2

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      +..+.+.+++++.++.+|||++.++|+.|+|||.||+++||||+
T Consensus        12 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~   55 (121)
T 1buo_A           12 PTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFE   55 (121)
T ss_dssp             HHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHH
Confidence            55688899999999999999999999999999999999999985

>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A

Probab=99.11  E-value=6e-12  Score=75.92  Aligned_cols=44  Identities=34%  Similarity=0.499  Sum_probs=41.4

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      ...+.+.++.++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus        16 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~   59 (125)
T 3ohu_A           16 CTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFW   59 (125)
T ss_dssp             HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHH
T ss_pred             HHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHH
Confidence            56788899999999999999999999999999999999999984

>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}

Probab=99.11  E-value=7.1e-12  Score=76.74  Aligned_cols=44  Identities=34%  Similarity=0.457  Sum_probs=40.9

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      ...+.+.++.++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus         9 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~   52 (135)
T 2yy9_A            9 SVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQ   52 (135)
T ss_dssp             HHHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHH
Confidence            34678899999999999999999999999999999999999985

>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A

Probab=99.10  E-value=7.3e-12  Score=74.88  Aligned_cols=44  Identities=36%  Similarity=0.415  Sum_probs=41.1

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      ...+...+++++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus        15 ~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~   58 (116)
T 3fkc_A           15 SGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFH   58 (116)
T ss_dssp             HHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHH
Confidence            45688889999999999999999999999999999999999984

>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A

Probab=99.09  E-value=8.9e-12  Score=75.34  Aligned_cols=44  Identities=27%  Similarity=0.438  Sum_probs=41.2

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      +..+.+.+..++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus        13 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~   56 (127)
T 1r29_A           13 ASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFY   56 (127)
T ss_dssp             HHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHH
Confidence            56688899999999999999999999999999999999999984

>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A

Probab=99.09  E-value=9.7e-12  Score=74.44  Aligned_cols=44  Identities=27%  Similarity=0.449  Sum_probs=40.9

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      ++.+...+.+++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus         9 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~   52 (120)
T 2if5_A            9 SSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFK   52 (120)
T ss_dssp             HHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHH
Confidence            45678889999999999999999999999999999999999984

>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0

Probab=99.08  E-value=3.4e-11  Score=72.34  Aligned_cols=40  Identities=18%  Similarity=0.226  Sum_probs=34.7

Q ss_pred             hhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         66 HLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        66 ~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      .+++.++  +.++.+|||++.++|+.|+|||+|||++|+||+
T Consensus        18 ~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~   57 (119)
T 3m5b_A           18 RLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLG   57 (119)
T ss_dssp             HHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGC
T ss_pred             HHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHh
Confidence            3455554  567899999999999999999999999999996

>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}

Probab=99.05  E-value=1.5e-11  Score=74.65  Aligned_cols=44  Identities=32%  Similarity=0.424  Sum_probs=41.1

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      ...+...++.++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus        17 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~   60 (129)
T 3ga1_A           17 GNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFR   60 (129)
T ss_dssp             HHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHH
T ss_pred             HHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHH
Confidence            45688889999999999999999999999999999999999985

>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}

Probab=99.05  E-value=1.1e-11  Score=76.64  Aligned_cols=44  Identities=25%  Similarity=0.406  Sum_probs=39.4

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      +..+.+.+..++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus        31 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~   74 (144)
T 2ppi_A           31 AARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIR   74 (144)
T ss_dssp             HHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHH
Confidence            56788899999999999999999999999999999999999995

>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}

Probab=99.03  E-value=9e-11  Score=72.03  Aligned_cols=48  Identities=38%  Similarity=0.475  Sum_probs=44.6

Q ss_pred             chHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932         16 NFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus        16 ~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      .+++.+.+.++.++.++.+|||++.++++.|++||.||+++|+||+++
T Consensus         7 ~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~   54 (145)
T 4eoz_A            7 VPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAM   54 (145)
T ss_dssp             CCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred             CChHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHH
Confidence            345678999999999999999999999999999999999999999887

>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}

Probab=99.03  E-value=6.4e-11  Score=74.60  Aligned_cols=51  Identities=35%  Similarity=0.430  Sum_probs=46.6

Q ss_pred             EeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932         13 KWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus        13 ~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      .+..+++.+.+.|++++.++.+|||++.++++.|++||.||+++|+||+++
T Consensus        13 ~~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~   63 (172)
T 3htm_A           13 MVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAM   63 (172)
T ss_dssp             CSCCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred             cCCCCHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHH
Confidence            344566779999999999999999999999999999999999999999887

>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A

Probab=98.99  E-value=9e-11  Score=79.40  Aligned_cols=44  Identities=27%  Similarity=0.466  Sum_probs=40.3

Q ss_pred             chhhHHHHHHHhhhCccccEEEEEC---CeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAE---GEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~---g~~f~~hr~vLaa~s~~f~  107 (107)
                      +..+.+.++.++.++.+|||++.++   |+.|+|||.||+++|+||+
T Consensus        16 ~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~   62 (279)
T 3i3n_A           16 CSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFT   62 (279)
T ss_dssp             HHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSG
T ss_pred             HHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHH
Confidence            5678889999999999999999998   9999999999999999995

>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}

Probab=98.96  E-value=6.2e-11  Score=72.76  Aligned_cols=44  Identities=41%  Similarity=0.553  Sum_probs=41.1

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      ++.+...+..++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus         9 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~   52 (145)
T 4eoz_A            9 ECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFS   52 (145)
T ss_dssp             CCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred             hHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHH
Confidence            45688899999999999999999999999999999999999985

>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}

Probab=98.89  E-value=1.5e-10  Score=72.91  Aligned_cols=44  Identities=41%  Similarity=0.553  Sum_probs=40.9

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      ++.+...+..++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus        18 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~   61 (172)
T 3htm_A           18 ECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFS   61 (172)
T ss_dssp             CCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHH
Confidence            45578889999999999999999999999999999999999995

>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B

Probab=98.86  E-value=1.5e-10  Score=77.39  Aligned_cols=44  Identities=25%  Similarity=0.406  Sum_probs=39.2

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      +..+.+.++.++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus        15 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~   58 (256)
T 3hve_A           15 AARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIR   58 (256)
T ss_dssp             HHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHH
T ss_pred             HHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHH
Confidence            45688899999999999999999999999999999999999995

>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A

Probab=98.83  E-value=8.7e-10  Score=75.50  Aligned_cols=44  Identities=41%  Similarity=0.553  Sum_probs=41.2

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      ++.+...+..++.++.++||++.++|+.|+|||.|||++||||+
T Consensus       158 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~  201 (312)
T 3hqi_A          158 ECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFS  201 (312)
T ss_dssp             CCCHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred             CchHHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHH
Confidence            55688899999999999999999999999999999999999984

>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A

Probab=98.77  E-value=2.8e-09  Score=72.96  Aligned_cols=47  Identities=38%  Similarity=0.500  Sum_probs=43.7

Q ss_pred             hHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932         17 FQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus        17 ~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      ++..+.+.+.+++.++.++||++.++++.|+|||.||+++||||+++
T Consensus       157 p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~  203 (312)
T 3hqi_A          157 PECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAM  203 (312)
T ss_dssp             CCCCHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred             CCchHHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHH
Confidence            34568899999999999999999999999999999999999999887

>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}

Probab=98.74  E-value=1.1e-09  Score=64.29  Aligned_cols=36  Identities=25%  Similarity=0.412  Sum_probs=33.5

Q ss_pred             HHhCCCeeeEEEEeCC----eEEeecceeeeccCcccccc
Q psy12932         28 LLKMESMVDVTLKAEG----EAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus        28 l~~~~~~~Dv~~~~~~----~~~~~h~~vl~~~s~~f~~~   63 (107)
                      +++++.+|||++.+++    +.|++||.||+++|+||+++
T Consensus         2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~   41 (109)
T 2vkp_A            2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAM   41 (109)
T ss_dssp             CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHH
T ss_pred             cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHH
Confidence            5678999999999998    89999999999999999977

>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}

Probab=97.22  E-value=9.3e-06  Score=47.14  Aligned_cols=19  Identities=26%  Similarity=0.473  Sum_probs=17.5

Q ss_pred             CeEEeeeeEEEeccCCCCC
Q psy12932         89 GEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        89 g~~f~~hr~vLaa~s~~f~  107 (107)
                      ++.|+|||.||+++|+||+
T Consensus        21 ~~~~~~Hk~iLa~~S~~F~   39 (109)
T 2vkp_A           21 TRTVPAHKYVLAVGSSVFY   39 (109)
T ss_dssp             CEEEEECHHHHHHHCHHHH
T ss_pred             cEEEEeeHHHHHHcCHHHH
Confidence            4899999999999999985

>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*

Probab=94.00  E-value=0.014  Score=33.17  Aligned_cols=26  Identities=23%  Similarity=0.327  Sum_probs=22.3

Q ss_pred             EEEEe-CCeEEeecceeeeccCcccccc
Q psy12932         37 VTLKA-EGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus        37 v~~~~-~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      |++.. +|..|++||.+ +.+|++|++|
T Consensus         4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m   30 (97)
T 4ajy_C            4 VKLISSDGHEFIVKREH-ALTSGTIKAM   30 (97)
T ss_dssp             EEEECTTCCEEEEEHHH-HTTSHHHHHH
T ss_pred             EEEEecCCcEEEecHHH-HHHhHHHHHH
Confidence            56665 67899999999 9999999877

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	107
d1r29a_	122	d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB	1e-07
d1r29a_	122	d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB	7e-06
d1buoa_	121	d.42.1.1 (A:) Promyelocytic leukaemia zinc finger	5e-07
d1buoa_	121	d.42.1.1 (A:) Promyelocytic leukaemia zinc finger	4e-06

>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Length = 122

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: B-cell lymphoma 6 (Bcl6) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (104), Expect = 1e-07
 Identities = 12/71 (16%), Positives = 30/71 (42%)

Query: 12 MKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNFQVHLAFEL 71
          +++      +   L +L   + + DV +    E F+AH+ +L A S  F +         
Sbjct: 3  IQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRN 62

Query: 72 YQLLKMESMVD 82
            ++ ++  ++
Sbjct: 63 LSVINLDPEIN 73

>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Length = 122

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: B-cell lymphoma 6 (Bcl6) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 7e-06
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 60  FQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107
           F      +   L +L   + + DV +    E F+AH+ +L A S  F 
Sbjct: 5   FTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFY 52

>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Length = 121

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 5e-07
 Identities = 12/75 (16%), Positives = 28/75 (37%)

Query: 12 MKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNFQVHLAFEL 71
          ++  +    L  +  Q+    ++ DV +  + + F AHR +L+ +S  F+      +   
Sbjct: 6  LQNPSHPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRNSQHY 65

Query: 72 YQLLKMESMVDVTLK 86
                       L+
Sbjct: 66 TLDFLSPKTFQQILE 80

>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Length = 121

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 4e-06
 Identities = 11/46 (23%), Positives = 23/46 (50%)

Query: 62  NFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107
           +    L  +  Q+    ++ DV +  + + F AHR +L+ +S  F+
Sbjct: 10  SHPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFE 55

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	107
d1buoa_	121	Promyelocytic leukaemia zinc finger (PLZF) protein	99.54
d1r29a_	122	B-cell lymphoma 6 (Bcl6) protein BTB domain {Human	99.47
d1buoa_	121	Promyelocytic leukaemia zinc finger (PLZF) protein	99.16
d1r29a_	122	B-cell lymphoma 6 (Bcl6) protein BTB domain {Human	99.11

>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.3e-15  Score=90.79  Aligned_cols=55  Identities=20%  Similarity=0.347  Sum_probs=52.6

Q ss_pred             eEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932          9 NFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus         9 ~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      .+.+++++|+..+++.|+++|.+|.+||+++.+++++|+|||+||+++|+||+++
T Consensus         3 ~~~~~~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~l   57 (121)
T d1buoa_           3 MIQLQNPSHPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEIL   57 (121)
T ss_dssp             CCCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHH
T ss_pred             eEEEcCCchHHHHHHHHHHHHhcCCcEeEEEEECCEEEEEEHHHhcccChhhhhh
Confidence            5668899999999999999999999999999999999999999999999999887

>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: B-cell lymphoma 6 (Bcl6) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.8e-14  Score=85.60  Aligned_cols=52  Identities=23%  Similarity=0.433  Sum_probs=50.0

Q ss_pred             EEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932         12 MKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF   63 (107)
Q Consensus        12 ~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~   63 (107)
                      +++++|+.++++.|+++|+++.+||+++.++|+.+++||.||+++|+||+++
T Consensus         3 ~~~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~   54 (122)
T d1r29a_           3 IQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSI   54 (122)
T ss_dssp             CCCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHhcCCCeEEEEEECCEEEEEehHHhhhCCHHHHHH
Confidence            4688999999999999999999999999999999999999999999999887

>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=1.2e-12  Score=77.63  Aligned_cols=44  Identities=25%  Similarity=0.457  Sum_probs=41.4

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      +.+++..++.++.++.+||+++.++|+.|+|||+|||++||||+
T Consensus        12 ~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~   55 (121)
T d1buoa_          12 PTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFE   55 (121)
T ss_dssp             HHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHhcCCcEeEEEEECCEEEEEEHHHhcccChhhh
Confidence            56788899999999999999999999999999999999999984

>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: B-cell lymphoma 6 (Bcl6) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=3.4e-12  Score=75.57  Aligned_cols=44  Identities=27%  Similarity=0.438  Sum_probs=41.1

Q ss_pred             chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932         64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ  107 (107)
Q Consensus        64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~  107 (107)
                      ..+++..|+.++..+.+||+++.++|+.|+|||.||+++|+||+
T Consensus         9 ~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~   52 (122)
T d1r29a_           9 ASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFY   52 (122)
T ss_dssp             HHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHhcCCCeEEEEEECCEEEEEehHHhhhCCHHHH
Confidence            45678899999999999999999999999999999999999985