Psyllid ID: psy12972
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1578 | 2.2.26 [Sep-21-2011] | |||||||
| Q3MIX3 | 580 | Uncharacterized aarF doma | yes | N/A | 0.167 | 0.456 | 0.468 | 3e-74 | |
| Q80V03 | 582 | Uncharacterized aarF doma | yes | N/A | 0.173 | 0.469 | 0.459 | 1e-73 | |
| Q5FVM7 | 771 | DnaJ homolog subfamily C | no | N/A | 0.409 | 0.837 | 0.267 | 7e-60 | |
| Q9Y2G8 | 782 | DnaJ homolog subfamily C | no | N/A | 0.403 | 0.814 | 0.261 | 5e-59 | |
| Q80TN4 | 772 | DnaJ homolog subfamily C | no | N/A | 0.411 | 0.841 | 0.264 | 2e-58 | |
| Q5RCM7 | 782 | DnaJ homolog subfamily C | no | N/A | 0.403 | 0.813 | 0.258 | 2e-58 | |
| Q5ZKZ4 | 777 | DnaJ homolog subfamily C | yes | N/A | 0.414 | 0.841 | 0.272 | 1e-55 | |
| Q54P00 | 695 | Probable serine/threonine | yes | N/A | 0.151 | 0.343 | 0.426 | 3e-55 | |
| Q5ZMT7 | 519 | Uncharacterized aarF doma | no | N/A | 0.198 | 0.605 | 0.345 | 2e-53 | |
| Q86TW2 | 530 | Uncharacterized aarF doma | no | N/A | 0.173 | 0.515 | 0.372 | 2e-51 |
| >sp|Q3MIX3|ADCK5_HUMAN Uncharacterized aarF domain-containing protein kinase 5 OS=Homo sapiens GN=ADCK5 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 281 bits (719), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 147/314 (46%), Positives = 195/314 (62%), Gaps = 49/314 (15%)
Query: 261 ISFDYWWS----LRDIDEDSEYYPSILASVHQRSANRILSMCLTNGGLYIKLGQGMVSLD 316
IS DYWW LR ++E+S Y ++++ HQR+A+ +++ ++NGGLY+KLGQG+ S +
Sbjct: 97 ISLDYWWCTNVVLRGVEENSPGYLEVMSACHQRAADALVAGAISNGGLYVKLGQGLCSFN 156
Query: 317 HVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQALQ 376
H+LP +Y TLR L+
Sbjct: 157 HLLPPEYTRTLRVLE--------------------------------------------- 171
Query: 377 DKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKVQY 436
D+ L R EVD+LFLEDF +LF+ FD PIAAASLAQV RA +G VAVKVQY
Sbjct: 172 DRALKRGFQEVDELFLEDFQALPHELFQEFDYQPIAAASLAQVHRAKLHDGTSVAVKVQY 231
Query: 437 IDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAERCSKD 496
IDLR+RF GDI T++ LLR+ ++P F F WV+ +LK L QELDF NEGRNAERC+++
Sbjct: 232 IDLRDRFDGDIHTLELLLRLVEVMHPSFGFSWVLQDLKGTLAQELDFENEGRNAERCARE 291
Query: 497 LAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQI 556
LAH PYV +PR+ WDKSS RVLT +F G K++D E + +G ++ D+ KL AFAEQI
Sbjct: 292 LAHFPYVVVPRVHWDKSSKRVLTADFCAGCKVNDVEAIRSQGLAVHDIAEKLIKAFAEQI 351
Query: 557 FQTGFVHADPHSGN 570
F TGF+H+DPH GN
Sbjct: 352 FYTGFIHSDPHPGN 365
|
The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr). Homo sapiens (taxid: 9606) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: - |
| >sp|Q80V03|ADCK5_MOUSE Uncharacterized aarF domain-containing protein kinase 5 OS=Mus musculus GN=Adck5 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 279 bits (714), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 148/322 (45%), Positives = 198/322 (61%), Gaps = 49/322 (15%)
Query: 253 RSSYTVAVISFDYWWS----LRDIDEDSEYYPSILASVHQRSANRILSMCLTNGGLYIKL 308
RS IS DYWW LR ++E+S Y I+++ HQR+A+ +++ + NGGLY+KL
Sbjct: 89 RSVKIGLFISTDYWWCTNVVLRGVEENSPKYVEIMSACHQRAADALVAGAIRNGGLYVKL 148
Query: 309 GQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAA 368
GQG+ S +H+LP +Y TLR L+
Sbjct: 149 GQGLCSFNHLLPTEYIQTLRVLE------------------------------------- 171
Query: 369 ASLAQALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGV 428
DK L R EVD+LFLEDF ++LF+ FD P+AAASLAQV RA +G
Sbjct: 172 --------DKALTRGFREVDELFLEDFQALPNELFQEFDYEPMAAASLAQVHRAKLHDGT 223
Query: 429 EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488
+VAVKVQYIDLR+RF GD+ T++ LLR+ ++P F F WV+ +LK L QELDF NEGR
Sbjct: 224 DVAVKVQYIDLRDRFDGDVQTLELLLRLVELMHPSFGFSWVLQDLKGTLVQELDFENEGR 283
Query: 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKL 548
NAERC+++L H YV IPR+ WD+SS RVLT +F +G K++D EG+ +G ++ DV +KL
Sbjct: 284 NAERCAQELKHFHYVVIPRVHWDRSSKRVLTADFCNGCKVNDMEGIKSQGLAVQDVAKKL 343
Query: 549 FTAFAEQIFQTGFVHADPHSGN 570
FAEQIF TGF+H+DPH GN
Sbjct: 344 IQTFAEQIFHTGFIHSDPHPGN 365
|
The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr). Mus musculus (taxid: 10090) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q5FVM7|DJC16_RAT DnaJ homolog subfamily C member 16 OS=Rattus norvegicus GN=Dnajc16 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 233 bits (595), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 195/728 (26%), Positives = 331/728 (45%), Gaps = 82/728 (11%)
Query: 805 HYDLFGTTDGFSGQ-DSASRNFHNHMYNPFDDVFSEGFNFPF-EEHDISLFHKLSTTHWN 862
HY G G+ Q + R+FH + Y FD+ F F+FPF E S+ K +
Sbjct: 91 HYGDAGENQGYQQQREYRFRHFHENFY--FDESF---FHFPFNSERRDSIDEKYLLHFSH 145
Query: 863 FEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLAR 922
+ +P S+ P+LI SDWCF+C+ +EPI+K+++ EL LGVG VH E+ LA
Sbjct: 146 YVNEVVPDSFKKPYLIKITSDWCFSCIHIEPIWKEVVQELEGLGVGIGVVHAGYERRLAH 205
Query: 923 RLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNW 982
LG S P I + +G+ SFF + + + +F LP L+ ++ N FL W
Sbjct: 206 HLGAHST-PSILGIINGKISFFHN-AVVHENLRQFVESLLPGNLVEKVTNKNYVRFLSGW 263
Query: 983 REDNKVHALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSL 1042
+++NK HALLF ++ L Y + AF ++ + FG + + +++ V ++
Sbjct: 264 QQENKPHALLFGQTPAAPLLYKLTAFAYKDYVSFGYVYVGLRGVEEMTRQYNVNIYAPTM 323
Query: 1043 LIFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVK------KL 1096
LIFKE ++P+ +I + ++D N YL R++SQ + +CPVK K
Sbjct: 324 LIFKEHINKPADAIQARGLKKQVIEDFITQNKYLLASRLTSQKLFHELCPVKRSHRQRKY 383
Query: 1097 CVVLFSEDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEIS 1156
CVVL + ++ + FA + + + F++V+ +Q EF + L ++ +
Sbjct: 384 CVVLLTAEANKLSKPFDAFLSFALAN--TQDTVRFVHVYSSRQQEFASTLLPDIEAFQGK 441
Query: 1157 LHIAAMWRMDYKKIKYGWLLGDAVDD-WKDYNTTKDRLDAGLRSLVNDPYNNLLYDTALK 1215
++ + R + G ++ ++D W + K L L L DP L + L
Sbjct: 442 SGVSILERRNTA----GRVVFKTLEDPWTGSESDKFVLLGYLDQLRKDP-AFLSSEAVLP 496
Query: 1216 EISDEYIQSLGVRIFNRIFMHIEMAQQSL---SRQHILPAVSLIFTVIIIVVLAMIMNHY 1272
+++DE +R + ++ +SL + + ++P +SLIF+ + I+ +I+ +
Sbjct: 497 DLTDELAPVFLLRWLYSVSDYLSDFWESLLHSNWREMMPLLSLIFSALFILFGTVIVQAF 556
Query: 1273 MKLEE---------EEIPSTTSSMRNHSVNKEKKHKETKQE-LKLHALRAETYNGLVVLL 1322
E EE+P S KE K K+ +++ L TY +V L
Sbjct: 557 SDSNEERESHPPDKEEVPEKAGKTEP-SFTKESSSKIPKKGFVEVTELTDVTYTSNLVRL 615
Query: 1323 KPGCRTLILFIDNKSSRKLVSKFHAMVWPYRKNKSLMFGYLNIERKQSREWFKDILLEAL 1382
+PG ++L + N + L+ KF V+ + + SL F +L +++ REW + LLE
Sbjct: 616 RPGHMNVVLILSNSTKTSLLQKFALEVYTFTGSSSLHFSFLTLDKH--REWL-EYLLEFA 672
Query: 1383 PPDTPLA------INPRNCIGTVLSINGYRKYFCMYHAKLTGQYGSKSKDNTIKGKGLGA 1436
P+ R+ G VL++NG++KYFC++ T
Sbjct: 673 QDAAPIPNQYDKHFMERDYTGYVLALNGHKKYFCLFKPLKT------------------- 713
Query: 1437 YLGYNDSDYSDTDEEADLERGLHKHKAEPPPEYLLEDKLLDG----FPNWLDRLFEGTTP 1492
DEE L + +PP L K L G W++RL EG+
Sbjct: 714 -----------VDEETVGSCDLDSSRGKPPCG--LGPKPLKGKLSKLSLWMERLLEGSLQ 760
Query: 1493 RFYVEAWP 1500
RFY+ +WP
Sbjct: 761 RFYIPSWP 768
|
Rattus norvegicus (taxid: 10116) |
| >sp|Q9Y2G8|DJC16_HUMAN DnaJ homolog subfamily C member 16 OS=Homo sapiens GN=DNAJC16 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 231 bits (588), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 185/708 (26%), Positives = 327/708 (46%), Gaps = 71/708 (10%)
Query: 823 RNFHNHMYNPFDDVFSEGFNFPF-EEHDISLFHKLSTTHWNFEKNYIPKSYTTPHLILFY 881
R+FH + Y FD+ F F+FPF E S+ K ++ +P S+ P+LI
Sbjct: 113 RHFHENFY--FDESF---FHFPFNSERRDSIDEKYLLHFSHYVNEVVPDSFKKPYLIKIT 167
Query: 882 SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRT 941
SDWCF+C+ +EP++K+++ EL LGVG VH E+ LA LG S P I + +G+
Sbjct: 168 SDWCFSCIHIEPVWKEVIQELEELGVGIGVVHAGYERRLAHHLGAHST-PSILGIINGKI 226
Query: 942 SFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRL 1001
SFF + + + +F LP L+ ++ N FL W+++NK H LLF ++ V L
Sbjct: 227 SFFHN-AVVRENLRQFVESLLPGNLVEKVTNKNYVRFLSGWQQENKPHVLLFDQTPIVPL 285
Query: 1002 RYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSI 1061
Y + AF ++ + FG + + + +R+ + +LL+FKE +RP+ I +
Sbjct: 286 LYKLTAFAYKDYLSFGYVYVGLRGTEEMTRRYNINIYAPTLLVFKEHINRPADVIQARGM 345
Query: 1062 PVPTLQDITDNNPYLTLPRISSQSMLDAVCPVK------KLCVVLFSEDSPEHDASRHTL 1115
+ D N YL R++SQ + +CPVK K CVVL + ++ +
Sbjct: 346 KKQIIDDFITRNKYLLAARLTSQKLFHELCPVKRSHRQRKYCVVLLTAETTKLSKPFEAF 405
Query: 1116 RRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYK-KIKYGW 1174
FA + + + F++V+ +Q EF + L ++ + ++ + R + ++ Y
Sbjct: 406 LSFALAN--TQDTVRFVHVYSNRQQEFADTLLPDSEAFQGKSAVSILERRNTAGRVVYKT 463
Query: 1175 LLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTALKEISDEYIQSLGVRIFNRIF 1234
L D W + K L L L DP L + L +++DE +R F
Sbjct: 464 L----EDPWIGSESDKFILLGYLDQLRKDP-ALLSSEAVLPDLTDELAPVFLLRWFYSAS 518
Query: 1235 MHIEMAQQSL---SRQHILPAVSLIFTVIIIVVLAMIMNHYMKLEEE--------EIPST 1283
+I S+ + + ++P +SLIF+ + I+ +I+ + +E E
Sbjct: 519 DYISDCWDSIFHNNWREMMPLLSLIFSALFILFGTVIVQAFSDSNDERESSPPEKEEAQE 578
Query: 1284 TSSMRNHSVNKEKKHKETKQE-LKLHALRAETYNGLVVLLKPGCRTLILFIDNKSSRKLV 1342
+ S KE K K+ +++ L TY +V L+PG ++L + N + L+
Sbjct: 579 KTGKTEPSFTKENSSKIPKKGFVEVTELTDVTYTSNLVRLRPGHMNVVLILSNSTKTSLL 638
Query: 1343 SKFHAMVWPYRKNKSLMFGYLNIERKQSREWFKDILLEALPPDTPLA------INPRNCI 1396
KF V+ + + L F +L++++ REW + LLE P+ R+
Sbjct: 639 QKFALEVYTFTGSSCLHFSFLSLDKH--REWL-EYLLEFAQDAAPIPNQYDKHFMERDYT 695
Query: 1397 GTVLSINGYRKYFCMYHAKLTGQYGSKSKDNTIKGKGLGAYLGYNDSDYSDTDEEADLER 1456
G VL++NG++KYFC++ K + + + +G+ +D++
Sbjct: 696 GYVLALNGHKKYFCLF----------KPQKTVEEEEAIGSC--------------SDVDS 731
Query: 1457 GLHKHKAEPPPEYLLEDKLLDG----FPNWLDRLFEGTTPRFYVEAWP 1500
L+ ++ P L + + G W++RL EG+ RFY+ +WP
Sbjct: 732 SLYLGESRGKPSCGLGSRPIKGKLSKLSLWMERLLEGSLQRFYIPSWP 779
|
Homo sapiens (taxid: 9606) |
| >sp|Q80TN4|DJC16_MOUSE DnaJ homolog subfamily C member 16 OS=Mus musculus GN=Dnajc16 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 229 bits (583), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 192/725 (26%), Positives = 329/725 (45%), Gaps = 75/725 (10%)
Query: 805 HYDLFGTTDGFSGQDSASR--NFHNHMYNPFDDVFSEGFNFPFE-EHDISLFHKLSTTHW 861
HY G G+ Q R +FH + Y FD+ F F+FPF E S K
Sbjct: 91 HYGDAGENQGYQKQQREHRFRHFHENFY--FDESF---FHFPFNAERRDSGDEKYLLHFS 145
Query: 862 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLA 921
++ +P+S+ P+LI SDWCF+C+ +EP++K+++ EL LGVG VH E+ LA
Sbjct: 146 HYVNEVLPESFKRPYLIKITSDWCFSCIHIEPVWKEVVQELEGLGVGIGVVHAGYERRLA 205
Query: 922 RRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDN 981
LG S P I + G+ +FF + + +F LP L+ ++ N FL
Sbjct: 206 HHLGAHST-PSILGVISGKITFFHNAVVH-ENLRQFVESLLPGNLVEKVTNKNYVRFLSG 263
Query: 982 WREDNKVHALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 1041
W+++NK HALLF ++ V L Y + AF ++ + FG + + +++ V +
Sbjct: 264 WQQENKPHALLFGQTPAVPLMYKLTAFAYKDYVSFGYVYVGLRGVEEMTRQYNVNLYTPT 323
Query: 1042 LLIFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVK------K 1095
+LIFKE ++P+ I + ++D N YL R++SQ + +CPVK K
Sbjct: 324 MLIFKEHINKPADVIQARGLKKQVIEDFIAQNKYLLASRLTSQRLFHELCPVKRSHRQRK 383
Query: 1096 LCVVLFSEDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEI 1155
CVVL + ++ + FA + + + F++V+ +Q EF + L ++ +
Sbjct: 384 YCVVLLTAETNKVSKPFEAFLSFALAN--TQDTVRFVHVYSNRQQEFASTLLPDMEAFQG 441
Query: 1156 SLHIAAMWRMDYKKIKYGWLLGDAVDD-WKDYNTTKDRLDAGLRSLVNDPYNNLLYDTAL 1214
++ + R + G ++ ++D W + K L L L DP L + L
Sbjct: 442 KSGVSILERRNTA----GRVVFKTLEDPWTGSESDKFVLLGYLDQLRKDP-AFLSSEAVL 496
Query: 1215 KEISDEYIQSLGVRIFNRIFMHIEMAQQSL---SRQHILPAVSLIFTVIIIVVLAMIMNH 1271
+++DE +R + ++ +SL + + ++P +SLIF+ + I+ +++
Sbjct: 497 PDLTDELAPVFFLRWLYSVSDYLSDFWESLLHSNWREMMPLLSLIFSALFILFGTVMVQA 556
Query: 1272 YMKLEE---------EEIPSTTSSMRNHSVNKEKKHKETKQE-LKLHALRAETYNGLVVL 1321
+ E EE+P S KE K K+ +++ L TY +V
Sbjct: 557 FSDSNEERESHPADKEEVPEKAGKTEP-SFTKESSSKIPKKGFVEVTELTDVTYTSNLVR 615
Query: 1322 LKPGCRTLILFIDNKSSRKLVSKFHAMVWPYRKNKSLMFGYLNIERKQSREWFKDILLEA 1381
L+PG ++L + N + L+ KF V+ + + SL F +L +++ REW + LLE
Sbjct: 616 LRPGHMNVVLILSNSTKTSLLQKFALEVYTFTGSSSLHFSFLTLDKH--REWL-EYLLEF 672
Query: 1382 LPPDTPLA------INPRNCIGTVLSINGYRKYFCMYHAKLTGQYGSKSKDNTIKGKGLG 1435
P+ R+ G VL++NG++KYFC++ T
Sbjct: 673 AQDAAPIPNQYDKHFMERDYTGYVLALNGHKKYFCLFKPLKT------------------ 714
Query: 1436 AYLGYNDSDYSDTDEEADLERGLHKHKAEPPPEYLLEDKLLDGFPNWLDRLFEGTTPRFY 1495
++ + D D RG P P L+ K L W++RL EG+ RFY
Sbjct: 715 ----VDEETVASCD--PDSSRGKPSCGLGPKP---LKGK-LSKLSLWMERLLEGSLQRFY 764
Query: 1496 VEAWP 1500
+ +WP
Sbjct: 765 IPSWP 769
|
Mus musculus (taxid: 10090) |
| >sp|Q5RCM7|DJC16_PONAB DnaJ homolog subfamily C member 16 OS=Pongo abelii GN=DNAJC16 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 183/709 (25%), Positives = 328/709 (46%), Gaps = 73/709 (10%)
Query: 823 RNFHNHMYNPFDDVFSEGFNFPF-EEHDISLFHKLSTTHWNFEKNYIPKSYTTPHLILFY 881
R+FH + Y FD+ F F+FPF E S+ K ++ +P S+ P+LI
Sbjct: 113 RHFHENFY--FDESF---FHFPFNSERRDSIDEKYLLHFSHYVNEVVPDSFKKPYLIKIT 167
Query: 882 SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRT 941
SDWCF+C+ +EP++K+++ EL LGVG VH E+ LA LG S P I + +G+
Sbjct: 168 SDWCFSCIHIEPVWKEVVQELEELGVGIGVVHAGYERRLAHHLGAHST-PSILGIINGKI 226
Query: 942 SFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRL 1001
SFF+ + + + +F LP L+ ++ N FL W+++NK H LLF ++ V L
Sbjct: 227 SFFRN-AVVRENLRQFVESLLPGNLVEKVTGKNYVRFLSGWQQENKPHVLLFDQTPIVPL 285
Query: 1002 RYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSI 1061
Y + AF ++ + FG + + + +R+ + +LL+FKE ++P+ I +
Sbjct: 286 LYKLTAFAYKDYLSFGYVYVGLRGTEEMTRRYNINIYAPTLLVFKEHINKPADVIQARGM 345
Query: 1062 PVPTLQDITDNNPYLTLPRISSQSMLDAVCPV------KKLCVVLFSEDSPEHDASRHTL 1115
+ D N +L R++SQ + +CPV +K CVVL + ++ +
Sbjct: 346 KKQIIDDFITQNKHLLAARLTSQKLFHELCPVRRSHRQRKYCVVLLTAETTKLSKPFEAF 405
Query: 1116 RRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYK-KIKYGW 1174
FA + + + F++V+ +Q EF L ++ + ++ + R + ++ Y
Sbjct: 406 LSFALAN--TQDTVRFVHVYSNRQQEFAGTLLPDGEAFQGKSAVSILERRNTAGRVVYKT 463
Query: 1175 LLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTALKEISDEYIQSLGVRIFNRIF 1234
L D W + K L L L DP L + L +++DE +R F
Sbjct: 464 L----EDPWTGSESDKFILLGYLDQLRKDP-ALLSSEAVLPDLTDELAPVFLLRWFYSAC 518
Query: 1235 MHIEMAQQSL---SRQHILPAVSLIFTVIIIVVLAMIMNHYMKL---------EEEEIPS 1282
+I S+ + + ++P +SLIF+ + I+ +I+ + ++EE
Sbjct: 519 DYISDCWDSIFHNNWREMMPLLSLIFSALFILFGTVIVQAFSDSSDERESSPPDKEEAQE 578
Query: 1283 TTSSMRNHSVNKEKKHKETKQE-LKLHALRAETYNGLVVLLKPGCRTLILFIDNKSSRKL 1341
T S KE K K+ +++ L TY +V L+PG ++L + N + L
Sbjct: 579 KTGKTEP-SFTKENSSKIPKKGFVEVTELTDVTYTSNLVRLRPGHMNVVLILSNSTKTSL 637
Query: 1342 VSKFHAMVWPYRKNKSLMFGYLNIERKQSREWFKDILLEALPPDTPLA------INPRNC 1395
+ KF V+ + + L F +L++++ REW + LLE P+ R+
Sbjct: 638 LQKFALEVYTFTGSSCLHFSFLSLDKH--REWL-EYLLEFAQDAAPIPNQYDKHFMERDY 694
Query: 1396 IGTVLSINGYRKYFCMYHAKLTGQYGSKSKDNTIKGKGLGAYLGYNDSDYSDTDEEADLE 1455
G VL++NG++KYFC++ K + + + +G+ +D++
Sbjct: 695 TGYVLALNGHKKYFCLF----------KPQKTVEEEEAIGSC--------------SDVD 730
Query: 1456 RGLHKHKAEPPPEYLLEDKLLDG----FPNWLDRLFEGTTPRFYVEAWP 1500
L+ ++ P L + + G W++RL EG+ RFY+ +WP
Sbjct: 731 SSLYLGESRGKPSCGLGSRPIKGKLSKLSLWMERLLEGSLQRFYIPSWP 779
|
Pongo abelii (taxid: 9601) |
| >sp|Q5ZKZ4|DJC16_CHICK DnaJ homolog subfamily C member 16 OS=Gallus gallus GN=DNAJC16 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 219 bits (558), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 196/719 (27%), Positives = 331/719 (46%), Gaps = 65/719 (9%)
Query: 810 GTTDGFSG-QDSASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEKNYI 868
G + G+S Q +FH Y FD+ F F+FPF + H++ N I
Sbjct: 95 GESQGYSQHQQRQFHHFHEGFY--FDESF---FHFPFNSERRDTSDEKYLLHFSHYINEI 149
Query: 869 -PKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVG 927
P S+ P+LI SDWCF+C+ +EP++K++ EL LGVG VH E+ LA LG
Sbjct: 150 VPDSFKKPYLIKITSDWCFSCIHIEPVWKEVAQELEALGVGIGVVHAGYERRLAHHLGAH 209
Query: 928 SQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNK 987
S P I L +G+ +FF + + + +F LP L+ ++ N FL NW+++NK
Sbjct: 210 ST-PSILGLINGKITFF-HSAVVRENLRQFVENLLPGNLVEKITDKNYIRFLSNWKKENK 267
Query: 988 VHALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKE 1047
H LLF V L Y + AF +R + FG + + + ++ + +L+IFKE
Sbjct: 268 PHVLLFDHMPVVPLLYKLTAFAYRDYLSFGYVYVGLRGTEELSSQYNINVYTPTLMIFKE 327
Query: 1048 DKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVKKL------CVVLF 1101
D+P+ + + D N +L R+++Q + +CPVKK CVVL
Sbjct: 328 HIDKPADVAQARDMKKQLIDDFLSQNKFLMAARLTNQRLFQELCPVKKSHRQRKHCVVLL 387
Query: 1102 SEDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAA 1161
+ + + + FA + + + F +++ ++QPEF +AL E+ +
Sbjct: 388 TGEGDKFADAYEAFLTFAVAN--TKDTLRFAHIYNDRQPEFADALLMDEEKYRGKSAVVI 445
Query: 1162 MWRM-DYKKIKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTALKEISDE 1220
+ R + KI Y L + W+ N L L L DP L +T L +++DE
Sbjct: 446 LERRNNAGKIAYKTL----EEAWQGSNEDNFILLDLLDQLRTDP-GLLSSETVLADLNDE 500
Query: 1221 YIQSLGVRIFNRIFMHIEMAQQSL---SRQHILP-------AVSLIFTVIIIVVLAMIMN 1270
+R F +I SL + + ++P A+ ++F +I+ + +
Sbjct: 501 LAPMFLIRWFYSTLDYILDCWDSLFHSNWREMMPLLSLLFSALFILFGTVIVQAFSDSSD 560
Query: 1271 HYMKLEEEEIPSTTSSMRNH-SVNKEKKHKETKQE-LKLHALRAETYNGLVVLLKPGCRT 1328
E+ +T + +N S NKE + K+ +++ L YN +V L+PG
Sbjct: 561 TRDSPASEKKDTTAKTEKNDTSFNKESNSRVPKKGFVEVTELTDINYNSNLVRLRPGHMN 620
Query: 1329 LILFIDNKSSRKLVSKFHAMVWPYRKNKSLMFGYLNIERKQSREWFKDILLEALPPDTPL 1388
++L + N + L+ KF V+ + + SL F +L++++ REW + LLE P+
Sbjct: 621 VVLILSNSTKTALLQKFALEVYTFTGSSSLHFSFLSLDKH--REWL-EYLLEFAQDAAPI 677
Query: 1389 AIN------PRNCIGTVLSINGYRKYFCMYHAKLTGQYGSKSKDNTIKGKGLGAYLGYND 1442
R+ G VL++NG++KYFC++ +G +G LGA Y+
Sbjct: 678 PNQYDKHFLERDYTGYVLALNGHKKYFCLFKPHRSGD----------EGGTLGACEDYDS 727
Query: 1443 SDYSDTDEEADLERGLHKHKAEPPPEYLLEDKLLDGFPNWLDRLFEGTTPRFYVEAWPT 1501
S +++ RG + P L++K L W++RL EG+ RFY+ +WP
Sbjct: 728 SLHTEA-------RG---KSSCSPGSRSLKNK-LHKLSFWMERLLEGSLQRFYIPSWPA 775
|
Gallus gallus (taxid: 9031) |
| >sp|Q54P00|ABKD_DICDI Probable serine/threonine-protein kinase abkD OS=Dictyostelium discoideum GN=abkD PE=2 SV=1 | Back alignment and function description |
|---|
Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/284 (42%), Positives = 154/284 (54%), Gaps = 45/284 (15%)
Query: 287 HQRSANRILSMCLTNGGLYIKLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLF 346
HQ SA+ IL +CLTNGGLYIK GQ + SL+H+LP QY TL
Sbjct: 244 HQESADLILDLCLTNGGLYIKAGQYIASLNHILPIQYTKTL------------------- 284
Query: 347 LEDFGCTHSQLFRSFDENPIAAASLAQALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSF 406
LQD+ R+ EV+ +FL+D G + F F
Sbjct: 285 --------------------------SVLQDQAPWRDFYEVESVFLKDLGNAPNHYFSDF 318
Query: 407 DENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDF 466
D PIAAASLAQV RA+TKEG EVAVKVQY+DL+ F GDI T LL + +P F+F
Sbjct: 319 DRLPIAAASLAQVHRAITKEGEEVAVKVQYVDLQRNFDGDIFTHNVLLTLVNMAFPDFEF 378
Query: 467 QWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGV 526
W+ E+K L +ELDF E NAER ++DL+ YIP++ SS R+LTTEFI G
Sbjct: 379 NWMAEEMKNVLIKELDFSQEADNAERAAQDLSSNNNAYIPKVFRPYSSKRILTTEFIHGC 438
Query: 527 KISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHSGN 570
KI++ + + G S V ++ EQIF FVH DPH+GN
Sbjct: 439 KINNVQAIRSMGLSEKTVSQRFMEIMCEQIFIHAFVHVDPHAGN 482
|
Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q5ZMT7|ADCK1_CHICK Uncharacterized aarF domain-containing protein kinase 1 OS=Gallus gallus GN=ADCK1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/373 (34%), Positives = 199/373 (53%), Gaps = 59/373 (15%)
Query: 253 RSSYTVAVISFDYWWSLRDIDEDSEYYPSILASVHQRSANRILSMCLTNGGLYIKLGQGM 312
R+ T AVI++DY SLR++ SE Y + + VH RSA R+ +C N G +IK+GQ +
Sbjct: 38 RAIATTAVITYDYLTSLRNVPYGSEEYDFLKSQVHLRSAERLRELCCANRGTFIKVGQHL 97
Query: 313 VSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLA 372
+LD++LP +Y TL+ L HSQ +S
Sbjct: 98 GALDYLLPEEYTRTLKVL-----------------------HSQAPQS------------ 122
Query: 373 QALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAV 432
+ E++Q+ ED G +LF SF++ P+ AASLAQV +AV ++G VAV
Sbjct: 123 ----------TRQEIEQVIREDLGKEIKELFVSFEDTPLGAASLAQVHKAVLQDGRTVAV 172
Query: 433 KVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAER 492
K+Q+ ++ + DI ++ LL + ++P F+F W++ E K L ELDFLNEGRNAE+
Sbjct: 173 KIQHPKVQAQSSKDIFLMEVLLLVVKQIFPDFEFMWLVEEAKKNLPLELDFLNEGRNAEK 232
Query: 493 CSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF 552
++ L + ++ +PRI W+ S+ RVL EF++G +++DK + + G + ++ R L +
Sbjct: 233 VAQMLKNFEFLKVPRIYWELSTRRVLLMEFMEGGQVNDKAYMEKNGIDVNEISRNLGKLY 292
Query: 553 AEQIFQTGFVHADPHSGNDVNTWLYPVDLGDKFRLVLATTLREDGYPDSGEWNPLEESPR 612
+E IF GFVH DPH GN V P D G + ++L D G + L ES R
Sbjct: 293 SEMIFVNGFVHCDPHPGN-VLVKKCP-DSGKAYIILL----------DHGLYQVLSESFR 340
Query: 613 MNFNLIMLWYTFL 625
M++ LW +
Sbjct: 341 MDY--CRLWLALI 351
|
The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr). Gallus gallus (taxid: 9031) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q86TW2|ADCK1_HUMAN Uncharacterized aarF domain-containing protein kinase 1 OS=Homo sapiens GN=ADCK1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 173/325 (53%), Gaps = 52/325 (16%)
Query: 253 RSSYTVAVISFDYWWSLRDIDEDSEYYPS-------ILASVHQRSANRILSMCLTNGGLY 305
R+ T AVIS+DY SL+ + SE Y + VH RSA R+ +C N G +
Sbjct: 41 RAVATTAVISYDYLTSLKSVPYGSEEYLQLRSKSWPVFLQVHLRSARRLCELCCANRGTF 100
Query: 306 IKLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENP 365
IK+GQ + +LD++LP +Y TL+ L HSQ
Sbjct: 101 IKVGQHLGALDYLLPEEYTSTLKVL-----------------------HSQ--------- 128
Query: 366 IAAASLAQALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTK 425
A S Q E+ Q+ ED G LF+SFD+ P+ ASLAQV +AV
Sbjct: 129 -APQSSMQ------------EIRQVIREDLGKEIHDLFQSFDDTPLGTASLAQVHKAVLH 175
Query: 426 EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485
+G VAVKVQ+ +R + DI ++ L+ L+P+F+F W+++E K L ELDFLN
Sbjct: 176 DGRTVAVKVQHPKVRAQSSKDILLMEVLVLAVKQLFPEFEFMWLVDEAKKNLPLELDFLN 235
Query: 486 EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVD 545
EGRNAE+ S+ L H ++ +PRI WD S+ RVL EF+DG +++D++ + + ++
Sbjct: 236 EGRNAEKVSQMLRHFDFLKVPRIHWDLSTERVLLMEFVDGGQVNDRDYMERNKIDVNEIS 295
Query: 546 RKLFTAFAEQIFQTGFVHADPHSGN 570
R L ++E IF GFVH DPH GN
Sbjct: 296 RHLGKMYSEMIFVNGFVHCDPHPGN 320
|
The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr). Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1578 | ||||||
| 383849234 | 816 | PREDICTED: dnaJ homolog subfamily C memb | 0.426 | 0.824 | 0.418 | 1e-161 | |
| 350414890 | 816 | PREDICTED: dnaJ homolog subfamily C memb | 0.426 | 0.824 | 0.424 | 1e-161 | |
| 380012969 | 815 | PREDICTED: dnaJ homolog subfamily C memb | 0.425 | 0.824 | 0.421 | 1e-160 | |
| 328777418 | 815 | PREDICTED: dnaJ homolog subfamily C memb | 0.425 | 0.824 | 0.419 | 1e-160 | |
| 340722024 | 816 | PREDICTED: dnaJ homolog subfamily C memb | 0.426 | 0.824 | 0.421 | 1e-159 | |
| 157129663 | 807 | hypothetical protein AaeL_AAEL002502 [Ae | 0.422 | 0.826 | 0.415 | 1e-156 | |
| 307173003 | 809 | DnaJ-like protein subfamily C member 16 | 0.424 | 0.828 | 0.413 | 1e-154 | |
| 307199297 | 812 | DnaJ-like protein subfamily C member 16 | 0.422 | 0.821 | 0.401 | 1e-153 | |
| 170052877 | 831 | conserved hypothetical protein [Culex qu | 0.421 | 0.800 | 0.397 | 1e-151 | |
| 312380617 | 795 | hypothetical protein AND_07273 [Anophele | 0.424 | 0.842 | 0.402 | 1e-149 |
| >gi|383849234|ref|XP_003700250.1| PREDICTED: dnaJ homolog subfamily C member 16-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 300/716 (41%), Positives = 442/716 (61%), Gaps = 43/716 (6%)
Query: 806 YDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEK 865
+D G T+ + + N++ +P +++F+ F F ++ DISLF+K+S T+ +FE
Sbjct: 118 FDNHGITEESISRQRRDNSHFNNVLDPLEELFAGNFKFHYQNRDISLFYKMSITYRSFEN 177
Query: 866 NYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLG 925
+PK+Y TP++ILFYSDWCFACLQVEP +++L+DEL PLG+G T H E LARRLG
Sbjct: 178 VIVPKTYRTPYMILFYSDWCFACLQVEPTWRRLIDELEPLGLGLATAHAEKESALARRLG 237
Query: 926 VGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWRED 985
+ S LP + ++ DGR+S +KE FS+QK+V+F R K PYKLI ++ NVD FL W D
Sbjct: 238 IHS-LPCLVVIIDGRSSVYKESLFSIQKIVDFLRNKFPYKLIPSINTNNVDNFLSGWI-D 295
Query: 986 NKVHALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIF 1045
N++ AL+F + VRLRYL AF +R + FG + D+ ++ ++ ++K+ D D+LL+F
Sbjct: 296 NRIRALIFDKKESVRLRYLFIAFYYRDRVAFGFVQMDKPETEAIAAKYKISMDLDTLLLF 355
Query: 1046 KEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVC------PVKKLCVV 1099
E+ ++P AS++M I T+ ++ NN +L LPR+S+Q+MLD+VC P K+LC V
Sbjct: 356 NENSEKPMASVSMKDISSDTMHNVISNNKFLALPRLSNQAMLDSVCPPEWLRPQKRLCAV 415
Query: 1100 LFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSS-EISL 1157
L S ++SP HD +RH R+ A ES + + + YVF + QPEFV+AL++ E S E L
Sbjct: 416 LISQQNSPLHDLARHKFRQAALESSYSTERVRYTYVFKDTQPEFVSALSTGEGSPLEPLL 475
Query: 1158 HIAAMWRMDYKKIKYGWLLGD---AVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTAL 1214
HI +WR D +KY WL D A D +N T+ L+ ++ L+ L Y +
Sbjct: 476 HIVIIWRRDANHLKYEWLPTDWIEAAQDETQWNETRQNLEQTIQRLLRVS-EALPYAAVV 534
Query: 1215 KEISDEYIQSLGVRIFNRIFMHIEMAQQSLSRQHILPAVSLIFTVIIIVVLAMIMNHYMK 1274
E++DE+ Q ++ + + ++ SL+++ ILP VS+I T+++I M++ +K
Sbjct: 535 GELADEHAQGTVDKLIGKALLAVDYISDSLTKEQILPLVSVIATLMLIGAAGYGMSYLVK 594
Query: 1275 LEEEEIPSTTSSMRNHSVNKEKKHKETKQELKLHALRAETYNGLVVLLKPGCRTLILFID 1334
LEE + + + +++S K ++ +L+LH LRAE YNGLV LLKPGCRT+IL +D
Sbjct: 595 LEEASVQAERAQCKDNS-----KSTPSQPQLRLHELRAEKYNGLVRLLKPGCRTIILLVD 649
Query: 1335 NKSSRKLVSKFHAMVWPYRKNKSLMFGYLNIERKQSREWFKDILLEALPPDTPLAINPRN 1394
+S KL+ FH VWPYRKNK+LMFG++++ER +W+K +L LP L IN +N
Sbjct: 650 VQSRLKLLPAFHKAVWPYRKNKTLMFGHMSLER--GLDWYKKLLSLTLPEQKELNINAKN 707
Query: 1395 CIGTVLSINGYRKYFCMYHAK---LTGQYGSKSKDNTIK-------GKGLGAYLGYNDSD 1444
C+GTVLS+NG+RKYFCMYHAK T GSK + K GA++G++ S+
Sbjct: 708 CVGTVLSLNGHRKYFCMYHAKHPECTKGKGSKRIERMTKQLTRRTDDAEAGAFIGFDSSN 767
Query: 1445 YSDTDEEADLERGLHKHKAEPPPEYLLEDKLLDGFPNWLDRLFEGTTPRFYVEAWP 1500
SD E+ E L +D LLDG P WLDRLFEG T R+YV WP
Sbjct: 768 ESDLSED------------ESGNNVLYQDNLLDGLPMWLDRLFEGLTHRYYVNYWP 811
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350414890|ref|XP_003490458.1| PREDICTED: dnaJ homolog subfamily C member 16-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 304/716 (42%), Positives = 439/716 (61%), Gaps = 43/716 (6%)
Query: 806 YDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEK 865
+D G T+ + + N++++P +++F+ F F ++ DISLF+K+S T+ +FE
Sbjct: 118 FDNHGITEESISRQRRDNSHFNNVFDPLEELFARNFKFHYQNRDISLFYKMSITYRSFEN 177
Query: 866 NYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLG 925
+PK+ TP+LILFYSDWCFACLQVEPI+++L+DEL PLG+G T H E LAR+LG
Sbjct: 178 VIVPKTLRTPYLILFYSDWCFACLQVEPIWRRLIDELEPLGLGLATAHAEKESALARKLG 237
Query: 926 VGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWRED 985
+ S LP + + DGRTS +KE FS+QK+V+F R K PYKLI ++ NVD FL W D
Sbjct: 238 IHS-LPCLVVTIDGRTSVYKESLFSIQKIVDFLRNKFPYKLIPNINKNNVDNFLSGWI-D 295
Query: 986 NKVHALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIF 1045
N++ AL+F + VRLRYL AF +R + FG + + D+ + ++K+ D D+LL+F
Sbjct: 296 NRIRALIFDKKESVRLRYLFIAFYYRDRVAFGFVQTGKLDTELIVMKYKISVDLDTLLLF 355
Query: 1046 KEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVC------PVKKLCVV 1099
E+ ++P AS++M I T+ ++ NN +L LPR+S+Q+MLD+VC P K+LC V
Sbjct: 356 NENSEKPMASVSMKDISSDTMHNVISNNKFLALPRLSNQAMLDSVCPPEWLRPQKRLCAV 415
Query: 1100 LFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSS-EISL 1157
L S ++SP HD +RH R+ A ES + + + YVF + QPEFV+AL++ E S E L
Sbjct: 416 LISQQNSPLHDLARHKFRQAALESSYSTERVRYTYVFKDTQPEFVSALSTGEGSPLEPLL 475
Query: 1158 HIAAMWRMDYKKIKYGWLLG---DAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTAL 1214
HI +WR D +KY WL +A D +N T+ L+ ++ L+ L Y +
Sbjct: 476 HIVIIWRRDANHLKYEWLPTGWIEAAQDETQWNETRRNLEQTIQRLLRAS-EALPYAAVV 534
Query: 1215 KEISDEYIQSLGVRIFNRIFMHIEMAQQSLSRQHILPAVSLIFTVIIIVVLAMIMNHYMK 1274
E++DE+ Q ++ + + ++ SL+++ ILP VS+I T+++I M++ K
Sbjct: 535 GELADEHAQGTVDKLIGKALLAVDYISDSLTKEQILPLVSVIATLMLIGAAGYGMSYLAK 594
Query: 1275 LEEEEIPSTTSSMRNHSVNKEKKHKETKQELKLHALRAETYNGLVVLLKPGCRTLILFID 1334
LEE I + + ++++ K ++ +L+LH LRAE YNGLV LLKPGCRT+IL +D
Sbjct: 595 LEEASIQAERAQCKDNN-----KPMPSQPQLRLHELRAEKYNGLVRLLKPGCRTIILLVD 649
Query: 1335 NKSSRKLVSKFHAMVWPYRKNKSLMFGYLNIERKQSREWFKDILLEALPPDTPLAINPRN 1394
+S KL+ FH VWPYRKNK+LMFG+L++ER EW+K +L LP L IN +N
Sbjct: 650 VQSRLKLLPAFHKAVWPYRKNKTLMFGHLSLER--GLEWYKKLLSLTLPEQKELNINAKN 707
Query: 1395 CIGTVLSINGYRKYFCMYHAK---LTGQYGSKSKDNTIK-------GKGLGAYLGYNDSD 1444
C+GTVLS+NG+RKYFCMYHAK T GSK + K GA++G+N S+
Sbjct: 708 CVGTVLSLNGHRKYFCMYHAKHPECTKGKGSKRIERMTKQLTRRTDDAEAGAFIGFNSSN 767
Query: 1445 YSDTDEEADLERGLHKHKAEPPPEYLLEDKLLDGFPNWLDRLFEGTTPRFYVEAWP 1500
SD EE E L +D LLDG P WLDRLFEG T R+YV WP
Sbjct: 768 ESDASEE------------EGGNNVLCQDNLLDGLPMWLDRLFEGLTHRYYVNYWP 811
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380012969|ref|XP_003690544.1| PREDICTED: dnaJ homolog subfamily C member 16-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 302/717 (42%), Positives = 443/717 (61%), Gaps = 45/717 (6%)
Query: 806 YDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEK 865
+D G T+ + + N++++P +++F+ F F ++ DISLF+K+S T+ +FE
Sbjct: 117 FDNHGITEENISRQRRDNSHFNNVFDPLEELFARNFKFHYQNRDISLFYKMSITYRSFEN 176
Query: 866 NYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLG 925
IPK++ TP+LILFYSDWCFACLQ+EP +++L+DEL PLG+G T H E LAR+LG
Sbjct: 177 VIIPKTFRTPYLILFYSDWCFACLQIEPTWRRLIDELEPLGLGLATAHAEKESALARKLG 236
Query: 926 VGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWRED 985
+ S LP + + DGRTS +KE FS+QK+V+F R K PYKLI ++ N+D+FL W D
Sbjct: 237 IHS-LPCLVVTIDGRTSVYKESLFSIQKIVDFLRSKFPYKLISNINKNNIDSFLSGWI-D 294
Query: 986 NKVHALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIF 1045
N++ AL+F + VRLRYL AF +R + FG + ++ ++ + ++K+ D D+LL+F
Sbjct: 295 NRIRALIFDKKESVRLRYLFVAFYYRDRVAFGFVQMEKPETELIVTKYKISVDLDTLLLF 354
Query: 1046 KEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVC------PVKKLCVV 1099
E+ ++P AS++M I T+ ++ NN +L LPR+S+Q+MLD++C P K+LC V
Sbjct: 355 NENSEKPMASVSMKDISSDTMHNVISNNKFLALPRLSNQAMLDSLCPPEWLRPQKRLCAV 414
Query: 1100 LFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSS-EISL 1157
L S ++S HD +RH R+ A ES + + + YVF + QPEFV+AL++ E S E L
Sbjct: 415 LISQQNSHFHDLARHKFRQAALESSYSTERVRYTYVFKDTQPEFVSALSTGEGSPLEPLL 474
Query: 1158 HIAAMWRMDYKKIKYGWLLG---DAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTAL 1214
HI +WR D +KY WL +A D +N T+ L+ ++ L+ L Y +
Sbjct: 475 HIVIIWRRDANHLKYEWLPTGWIEAAQDESQWNETRRNLEQTIQRLLRAS-EALPYAAVV 533
Query: 1215 KEISDEYIQSLGVRIFNRIFMHIEMAQQSLSRQHILPAVSLIFTVIIIVVLAMIMNHYMK 1274
E++DE+ Q ++ + + ++ SL+++ ILP VS+I T+++I M++ K
Sbjct: 534 GELADEHAQGTVDKLIGKALLAVDYISDSLTKEQILPLVSVIATLMLIGAAGYGMSYLAK 593
Query: 1275 LEEEEIPSTTSSMRNHSVNKEKKHKETKQELKLHALRAETYNGLVVLLKPGCRTLILFID 1334
LEE I + + +N+S K T+ +L+LH LRAE YNGLV LLKPGCRT+IL +D
Sbjct: 594 LEEASIQAERAQCKNNS-----KPTPTQPQLRLHELRAEKYNGLVRLLKPGCRTIILLVD 648
Query: 1335 NKSSRKLVSKFHAMVWPYRKNKSLMFGYLNIERKQSREWFKDILLEALPPDTPLAINPRN 1394
++S KL+ FH VWPYRKNK+LMFG+L++ER EW+K +L LP L IN +N
Sbjct: 649 DQSRLKLLPAFHKAVWPYRKNKTLMFGHLSLER--GLEWYKKLLSLTLPEQKELNINAKN 706
Query: 1395 CIGTVLSINGYRKYFCMYHAK----LTGQYGSKSKDNTIK-------GKGLGAYLGYNDS 1443
CIGTVLS+NG+RKYFCMYHAK + G+ GSK + K GA++G++ S
Sbjct: 707 CIGTVLSLNGHRKYFCMYHAKHPECIKGK-GSKRIERMTKQLTRKTDDAEAGAFIGFDSS 765
Query: 1444 DYSDTDEEADLERGLHKHKAEPPPEYLLEDKLLDGFPNWLDRLFEGTTPRFYVEAWP 1500
+ SD EE E L +D LLDG P WLDRLFEG T R+YV WP
Sbjct: 766 NESDISEE------------ENGNNILCQDNLLDGLPMWLDRLFEGLTHRYYVNYWP 810
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328777418|ref|XP_395584.4| PREDICTED: dnaJ homolog subfamily C member 16-like [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 301/717 (41%), Positives = 443/717 (61%), Gaps = 45/717 (6%)
Query: 806 YDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEK 865
+D G T+ + + N++++P +++F+ F F ++ DISLF+K+S T+ +FE
Sbjct: 117 FDNHGITEENISRQRRDNSHFNNVFDPLEELFARNFKFHYQNRDISLFYKMSITYRSFEN 176
Query: 866 NYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLG 925
+PK++ TP+LILFYSDWCFACLQ+EP +++L+DEL PLG+G T H E LAR+LG
Sbjct: 177 VIVPKTFRTPYLILFYSDWCFACLQIEPTWRRLIDELEPLGLGLATAHAEKESALARKLG 236
Query: 926 VGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWRED 985
+ S LP + + DGRTS +KE FS+QK+V+F R K PYKLI ++ N+D+FL W D
Sbjct: 237 IHS-LPCLVVTIDGRTSVYKESLFSIQKIVDFLRSKFPYKLISNINKNNIDSFLSGWI-D 294
Query: 986 NKVHALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIF 1045
N++ AL+F + VRLRYL AF +R + FG + ++ ++ + ++K+ D D+LL+F
Sbjct: 295 NRIRALIFDKKESVRLRYLFVAFYYRDRVAFGFVQMEKPETELIMTKYKISVDLDTLLLF 354
Query: 1046 KEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVC------PVKKLCVV 1099
E+ ++P AS++M I T+ +I NN +L LPR+S+Q+MLD++C P K+LC V
Sbjct: 355 NENSEKPMASVSMKDISSDTMHNIISNNKFLALPRLSNQAMLDSLCPPEWLRPQKRLCAV 414
Query: 1100 LFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSS-EISL 1157
L S ++S HD +RH R+ A ES + + + YVF + QPEFV+AL++ E S E L
Sbjct: 415 LISQQNSHFHDLARHKFRQAALESSYSTERVRYTYVFKDTQPEFVSALSTGEGSPLEPLL 474
Query: 1158 HIAAMWRMDYKKIKYGWLLG---DAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTAL 1214
HI +WR D +KY WL +A D +N T+ L+ ++ L+ L Y +
Sbjct: 475 HIVIIWRRDANHLKYEWLPTGWIEAAQDESQWNETRRNLEQTIQRLLRAS-EALPYAAVV 533
Query: 1215 KEISDEYIQSLGVRIFNRIFMHIEMAQQSLSRQHILPAVSLIFTVIIIVVLAMIMNHYMK 1274
E++DE+ Q ++ + + ++ SL+++ ILP VS+I T+++I M++ K
Sbjct: 534 GELADEHAQGTVDKLIGKALLAVDYISDSLTKEQILPLVSVIATLMLIGAAGYGMSYLAK 593
Query: 1275 LEEEEIPSTTSSMRNHSVNKEKKHKETKQELKLHALRAETYNGLVVLLKPGCRTLILFID 1334
LEE I + + +N+S K T+ +L+LH LRAE YNGLV LLKPGCRT+IL +D
Sbjct: 594 LEEASIQAERAQCKNNS-----KPTPTQPQLRLHELRAEKYNGLVRLLKPGCRTIILLVD 648
Query: 1335 NKSSRKLVSKFHAMVWPYRKNKSLMFGYLNIERKQSREWFKDILLEALPPDTPLAINPRN 1394
++S KL+ FH VWPYRKNK+LMFG+L++ER EW+K +L LP L IN +N
Sbjct: 649 DQSRLKLLPAFHKAVWPYRKNKTLMFGHLSLER--GLEWYKKLLSLTLPEQKELNINAKN 706
Query: 1395 CIGTVLSINGYRKYFCMYHAK----LTGQYGSKSKDNTIK-------GKGLGAYLGYNDS 1443
CIGTVLS+NG+RKYFCMYHAK + G+ GSK + K GA++G++ S
Sbjct: 707 CIGTVLSLNGHRKYFCMYHAKHPECIKGK-GSKRIERMTKQLTRKTDDAEAGAFIGFDSS 765
Query: 1444 DYSDTDEEADLERGLHKHKAEPPPEYLLEDKLLDGFPNWLDRLFEGTTPRFYVEAWP 1500
+ SD EE E L +D LLDG P WLDRLFEG T R+Y+ WP
Sbjct: 766 NESDVSEE------------ENGNNILCQDNLLDGLPMWLDRLFEGLTHRYYINYWP 810
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340722024|ref|XP_003399412.1| PREDICTED: dnaJ homolog subfamily C member 16-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 571 bits (1472), Expect = e-159, Method: Compositional matrix adjust.
Identities = 302/716 (42%), Positives = 438/716 (61%), Gaps = 43/716 (6%)
Query: 806 YDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEK 865
+D G T+ + + N++++P +++ + F + ++ DISLF+K+S T+ +FE
Sbjct: 118 FDNHGITEESISRQRRDNSHFNNVFDPLEELLARNFKYHYQNRDISLFYKMSITYRSFEN 177
Query: 866 NYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLG 925
+PK+ TP+LILFYSDWCFACLQVEPI+++L+DEL PLG+G T H E LAR+LG
Sbjct: 178 IIVPKTLHTPYLILFYSDWCFACLQVEPIWRRLIDELEPLGLGLATAHAEKESALARKLG 237
Query: 926 VGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWRED 985
+ S LP + + DGRTS +KE FS+QK+V+F R K PYKLI ++ NVD FL W D
Sbjct: 238 IHS-LPCLVVTIDGRTSVYKESLFSIQKIVDFLRNKFPYKLIPNINKNNVDKFLSGWI-D 295
Query: 986 NKVHALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIF 1045
N++ AL+F + VRLRYL AF +R + FG + + D+ + ++K+ D D+LL+F
Sbjct: 296 NRIRALIFDKKESVRLRYLFIAFYYRDRVAFGFVQTGKLDTELIVMKYKISVDLDTLLLF 355
Query: 1046 KEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVC------PVKKLCVV 1099
E+ ++P AS++M I T+ ++ NN +L LPR+S+Q+MLD+VC P K+LC V
Sbjct: 356 NENSEKPMASVSMKDISSDTMHNVISNNKFLALPRLSNQAMLDSVCPPEWLRPQKRLCAV 415
Query: 1100 LFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSS-EISL 1157
L S ++SP HD +RH R+ A ES + + + YVF + QPEFV+AL++ E S E L
Sbjct: 416 LISQQNSPLHDLARHKFRQAALESSYSTERVRYTYVFKDTQPEFVSALSTGEGSPLEPLL 475
Query: 1158 HIAAMWRMDYKKIKYGWLLG---DAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTAL 1214
HI +WR D +KY WL +A D +N T+ L+ ++ L+ L Y +
Sbjct: 476 HIVIIWRRDANHLKYEWLPTGWIEAAQDETQWNETRRNLEQTIQRLLRAS-EALPYAAVV 534
Query: 1215 KEISDEYIQSLGVRIFNRIFMHIEMAQQSLSRQHILPAVSLIFTVIIIVVLAMIMNHYMK 1274
E++DE+ Q ++ + + ++ SL+++ ILP VS+I T+++I M++ K
Sbjct: 535 GELADEHAQGTVDKLIGKALLAVDYISDSLTKEQILPLVSVIATLMLIGAAGYGMSYLAK 594
Query: 1275 LEEEEIPSTTSSMRNHSVNKEKKHKETKQELKLHALRAETYNGLVVLLKPGCRTLILFID 1334
LEE I + + ++++ K ++ +L+LH LRAE YNGLV LLKPGCRT+IL +D
Sbjct: 595 LEEASIQAERAQCKDNN-----KPTPSQPQLRLHELRAEKYNGLVRLLKPGCRTIILLVD 649
Query: 1335 NKSSRKLVSKFHAMVWPYRKNKSLMFGYLNIERKQSREWFKDILLEALPPDTPLAINPRN 1394
+S KL+ FH VWPYRKNK+LMFG+L++ER EW+K +L LP L IN +N
Sbjct: 650 VQSRLKLLPAFHKAVWPYRKNKTLMFGHLSLER--GLEWYKKLLSLTLPEQKELNINAKN 707
Query: 1395 CIGTVLSINGYRKYFCMYHAK---LTGQYGSKSKDNTIK-------GKGLGAYLGYNDSD 1444
C+GTVLS+NG+RKYFCMYHAK T GSK + K GA++G+N S+
Sbjct: 708 CVGTVLSLNGHRKYFCMYHAKHPECTKGKGSKRIERMTKQLTRRTDDAEAGAFIGFNSSN 767
Query: 1445 YSDTDEEADLERGLHKHKAEPPPEYLLEDKLLDGFPNWLDRLFEGTTPRFYVEAWP 1500
SD EE E L +D LLDG P WLDRLFEG T R+YV WP
Sbjct: 768 ESDASEE------------EGGNNVLCQDNLLDGLPMWLDRLFEGLTHRYYVNYWP 811
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157129663|ref|XP_001655444.1| hypothetical protein AaeL_AAEL002502 [Aedes aegypti] gi|108882045|gb|EAT46270.1| AAEL002502-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 302/727 (41%), Positives = 434/727 (59%), Gaps = 60/727 (8%)
Query: 806 YDLFGTT--DGFSGQDSASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNF 863
YDL+G T D ++ + + +PF+ F G NF F + DISLFH+LS T +
Sbjct: 104 YDLYGITNEDAHLYKERPDYSSYGRFPDPFEQFF--GHNFNFHDQDISLFHRLSITSKYY 161
Query: 864 EKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARR 923
E N +PKS+ TP +++FYSDWCF+C++ FKK++D L P GV F T++ +E L R+
Sbjct: 162 ETNIVPKSHHTPQILMFYSDWCFSCMKAANSFKKMIDTLEPFGVTFATINAGHENQLVRK 221
Query: 924 LGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWR 983
+GV S LP + ++ DG +KE ++ Q++VEF R KLPYKL++P+ ++D FL W
Sbjct: 222 VGVHS-LPCVIMVLDGHNYVYKESVYNTQRVVEFIRQKLPYKLLLPVDDGSIDNFLQGW- 279
Query: 984 EDNKVHALLFQ-RSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSL 1042
DN+V AL+ + RS P RLRYLI AF R + FG + + + S + +R+KV D+L
Sbjct: 280 ADNRVRALIMEPRSQP-RLRYLITAFHFRERVAFGFVQLNSQKSQHIQERYKVHPSLDTL 338
Query: 1043 LIFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPV------KKL 1096
LIF ED RP ASI+M+ IP PTL +I N YL LPR+SSQ+ML+ VCP K+L
Sbjct: 339 LIFNEDSTRPVASISMSDIPTPTLNNIISVNKYLALPRLSSQAMLEGVCPAEWNRPRKRL 398
Query: 1097 CVVLFSEDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEIS 1156
CVVL +E++ HD +R +RR A ES + + F Y++ EKQ EF++AL +E
Sbjct: 399 CVVLVTENTSTHDEARQAMRRIAMESNYSPERVRFAYIYQEKQTEFISALAEHSKLTETM 458
Query: 1157 LHIAAMWRMDYKKIKYGWL-------LGDAVDDWK---DYNTTKDRLDAGLRSLVNDPYN 1206
L + +WR D K IKY W+ L +V++ +YN TK +LD ++ L+
Sbjct: 459 LKVVIIWRKDAKHIKYEWVHEATMESLNRSVENETHELNYNNTKQKLDGAIQRLLRSS-E 517
Query: 1207 NLLYDTALKEISDEYIQSLGVRIFNRIFMHIEMAQQSLSRQHILPAVSLIFTVIIIVVLA 1266
L Y+ +K++ DE+ Q L +RI N++ + E ++L ++HILPA+S++ T+ I+
Sbjct: 518 ALTYEAEVKDLLDEHAQGLVIRILNKVLLAFEYMTENLGQEHILPALSVVGTIAFILGAG 577
Query: 1267 MIMNHYMKLEEEEIPSTTSSMRNHSVNKEKKHKETKQELKLHALRAETYNGLVVLLKPGC 1326
+M++ +++EEE I S NK K + EL+LH LRAE YNGLV LLKPGC
Sbjct: 578 YLMSYLVRVEEENIQKKQSK---SPENKNGKVQNYVPELRLHELRAEKYNGLVRLLKPGC 634
Query: 1327 RTLILFIDNKSSRKLVSKFHAMVWPYRKNKSLMFGYLNIERKQSREWFKDILLEALPPDT 1386
RT++L D +S KL+ FH VWPYRKNK+LMF ++ IE+ W+ ++L +L
Sbjct: 635 RTIVLLTDMQSRNKLIPAFHKAVWPYRKNKTLMFAHMLIEKGIG--WYAELLRLSLSESR 692
Query: 1387 PLAINPRNCIGTVLSINGYRKYFCMYHA-------------KLTGQYGSKSKDNTIKGKG 1433
+ INPRNCIGTV+++NG+RKYFCMYHA K+T Q + D
Sbjct: 693 EMKINPRNCIGTVIALNGHRKYFCMYHAKHPESNRGAKRMMKMTRQLSTMPSDPEA---- 748
Query: 1434 LGAYLGYNDSDYSDTDEEADLERGLHKHKAEPPPEYLLEDKLLDGFPNWLDRLFEGTTPR 1493
GA+LG + SD + + P+ LLE+ LLDG PNWLDRLFEGTT R
Sbjct: 749 -GAFLGMDSSDSETSTSDIS------------EPKILLEENLLDGLPNWLDRLFEGTTHR 795
Query: 1494 FYVEAWP 1500
+Y+ WP
Sbjct: 796 YYINYWP 802
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307173003|gb|EFN64145.1| DnaJ-like protein subfamily C member 16 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 297/718 (41%), Positives = 442/718 (61%), Gaps = 48/718 (6%)
Query: 806 YDLFGTTD-GFSGQDSASRNFHNHMYNPFDDVFSEGF-NFPFEEHDISLFHKLSTTHWNF 863
+D G TD G Q N H ++ +P +++F+ F F ++ DI+LFHK+S T+ +F
Sbjct: 112 FDNHGITDEGIPRQRRD--NSHFNVLDPLEELFTSNFKQFHYQTRDITLFHKMSITYRSF 169
Query: 864 EKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARR 923
E IPKSY TP+LILFYSDWCFACLQVEP +++L+DEL PLG+G T H E LARR
Sbjct: 170 ENVIIPKSYRTPYLILFYSDWCFACLQVEPTWRRLIDELEPLGLGLATAHAKKESTLARR 229
Query: 924 LGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWR 983
LG+ S LP + + DGRTS +KE S+QK+VEF R +LPYKLI +S TNV+ FL W
Sbjct: 230 LGIHS-LPCLVVTLDGRTSVYKESLLSIQKVVEFVRSRLPYKLISTISNTNVENFLSGW- 287
Query: 984 EDNKVHALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLL 1043
DN++ AL+F++ +RLRYL+ +F +R + FG + ++ ++ ++K+ G+ D+LL
Sbjct: 288 TDNRIRALIFEKRDFIRLRYLLMSFYYRDRVAFGFVQVGIAETENITSKYKISGELDTLL 347
Query: 1044 IFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVC------PVKKLC 1097
+F E+ ++P ASI+M I T+ ++ NN +L LPR+S+Q+MLD++C P K+LC
Sbjct: 348 LFNENSEKPMASISMKDISSETMHNVIANNKFLVLPRLSNQAMLDSICPPEWLRPQKRLC 407
Query: 1098 VVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSS-EI 1155
VL S ++SP HD +RH R+ A ES + + + + YVF + Q EFV+AL + E S E
Sbjct: 408 AVLISQQNSPLHDIARHKFRQVALESSYSTDRVRYAYVFKDTQSEFVSALAAGEGSPLEP 467
Query: 1156 SLHIAAMWRMDYKKIKYGWL---LGDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDT 1212
LHI +WR D +KY WL +A D + +N T+ L+ ++ L+ L Y
Sbjct: 468 LLHIVIIWRRDANHLKYEWLPHGWIEATQDDRIWNETRRHLEKTIQKLLR-ATEALPYAA 526
Query: 1213 ALKEISDEYIQSLGVRIFNRIFMHIEMAQQSLSRQHILPAVSLIFTVIIIVVLAMIMNHY 1272
+ E++DE+ Q ++ R + ++ +L+++ ILP +S++ T+++I M++
Sbjct: 527 VVGELADEHAQGTVDKLIGRALLAVDYISDNLTKEQILPLISVLATLMLIGAAGYGMSYL 586
Query: 1273 MKLEEEEIPSTTSSMRNHSVNKEKKHKETKQELKLHALRAETYNGLVVLLKPGCRTLILF 1332
+KLEE + + + ++++ K ++ +L+LH LRAE YNGLV LLKPGCRT+IL
Sbjct: 587 VKLEEASVQAERTQYKDNA-----KSISSQPQLRLHELRAEKYNGLVRLLKPGCRTIILL 641
Query: 1333 IDNKSSRKLVSKFHAMVWPYRKNKSLMFGYLNIERKQSREWFKDILLEALPPDTPLAINP 1392
ID +S KL+ FH VWPYRKNK+LMF ++++E+ +W+K +L L L IN
Sbjct: 642 IDAQSRLKLLPAFHRAVWPYRKNKTLMFAHMSLEK--GLDWYKKLLSLTLSEQKDLNINA 699
Query: 1393 RNCIGTVLSINGYRKYFCMYHAK---LTGQYGSKSKDNTIKGKG-------LGAYLGYND 1442
+NC+GTVLS+NG+RKYFCMYHAK + GSK + K GA++G+
Sbjct: 700 KNCVGTVLSLNGHRKYFCMYHAKHPECSKGKGSKRIEKMTKQLARTPEDPEAGAFIGFES 759
Query: 1443 SDYSDTDEEADLERGLHKHKAEPPPEYLLEDKLLDGFPNWLDRLFEGTTPRFYVEAWP 1500
S+ SD ++ E G L +D LLDG P WLDRLFEG T R+Y+ WP
Sbjct: 760 SNESDMSQD---EGG----------NVLYQDNLLDGLPMWLDRLFEGLTHRYYINYWP 804
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307199297|gb|EFN79950.1| DnaJ-like protein subfamily C member 16 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 550 bits (1418), Expect = e-153, Method: Compositional matrix adjust.
Identities = 289/719 (40%), Positives = 438/719 (60%), Gaps = 52/719 (7%)
Query: 806 YDLFGTT--DGFSGQDSASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNF 863
+D FG T DG S Q S+ ++ + +P +++FS F F +++ DI+LFHK+S T+ ++
Sbjct: 117 FDNFGITSEDGVSRQRRDSKQYN--VRDPLEELFSGNFQFHYQKRDITLFHKMSITYRSY 174
Query: 864 EKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARR 923
E +PK+Y P+LILFYSDWCFAC QVEP +++L+DEL PLG G TV + E LARR
Sbjct: 175 ENMIVPKTYRMPYLILFYSDWCFACQQVEPTWRRLIDELEPLGFGLATVDIKKETSLARR 234
Query: 924 LGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWR 983
LG+ S LP + ++ +G + +KE FS+QK++E+ R KLPYKLI ++ NV+ FL W
Sbjct: 235 LGIHS-LPCLVVIIEGHANVYKESLFSIQKVIEYVRSKLPYKLITTVNNVNVENFLSGW- 292
Query: 984 EDNKVHALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLL 1043
DN++ AL+F++ +RLRYL+ +F HR + FG + ++ + ++K+ G+ D+LL
Sbjct: 293 TDNRIRALIFEKRDFIRLRYLLTSFYHRDRVAFGFVQVGIPETKDITSKYKISGELDTLL 352
Query: 1044 IFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVC------PVKKLC 1097
+F E+ ++P AS++M I T+ ++ NN +L LPR+S+Q+MLD++C P K+LC
Sbjct: 353 LFNENSEKPMASVSMKDISSETMHNVIANNKFLVLPRLSNQAMLDSICPPEWLKPQKRLC 412
Query: 1098 VVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSS-EI 1155
VL S ++SP HD +RH R+ A ES + + + Y+F + QPEFV+AL++ EDS E
Sbjct: 413 AVLISQQNSPLHDIARHKFRQAALESSYSSERVRYTYIFKDTQPEFVSALSASEDSPLEP 472
Query: 1156 SLHIAAMWRMDYKKIKYGWL---LGDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDT 1212
HI +WR D +KY WL DA D + +N T+ L+ ++ L+ L Y
Sbjct: 473 LSHIVIIWRRDANHLKYEWLPNGWADAAQDERIWNETRRHLEKTIQKLLR-ATEALPYAA 531
Query: 1213 ALKEISDEYIQSLGVRIFNRIFMHIEMAQQSLSRQHILPAVSLIFTVIIIVVLAMIMNHY 1272
++E++DE+ Q R+ R + ++ +L+++ ILP +S++ T+++I M++
Sbjct: 532 VIEELADEHAQGTVGRLIGRALLAVDYISDNLTKEQILPLISVLATLVLIGAAGYGMSYL 591
Query: 1273 MKLEEEEIPSTTSSMRNHSVNKEKKHKETKQELKLHALRAETYNGLVVLLKPGCRTLILF 1332
KLEE I + K+K +L++H LRAE YNGLV LLKPGCRT+IL
Sbjct: 592 AKLEEATIQAPL---------KDKLSPPQPPQLRIHELRAEKYNGLVRLLKPGCRTIILL 642
Query: 1333 IDNKSSRKLVSKFHAMVWPYRKNKSLMFGYLNIERKQSREWFKDILLEALPPDTPLAINP 1392
+D +S KL+ FH +VWPYRKNK+LMF ++++E+ +W+K +L L L IN
Sbjct: 643 VDAQSRLKLLPVFHKVVWPYRKNKTLMFAHMSLEK--GLDWYKKLLSLTLFDRKELNINA 700
Query: 1393 RNCIGTVLSINGYRKYFCMYHAKL----TGQYGSKSKDNTIKGKG-------LGAYLGYN 1441
+NC+GTVLS+NG+R+YFCMYHAKL T SK + K GA++G++
Sbjct: 701 KNCVGTVLSLNGHRRYFCMYHAKLPESMTKSKSSKRLERMTKQLAQRPEDAEAGAFIGFD 760
Query: 1442 DSDYSDTDEEADLERGLHKHKAEPPPEYLLEDKLLDGFPNWLDRLFEGTTPRFYVEAWP 1500
S+ SD ++ E L D LLDG P WLDRLFEG T R+Y+ WP
Sbjct: 761 SSNDSDMSQD------------EGGNNVLYHDNLLDGLPMWLDRLFEGLTQRYYINYWP 807
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|170052877|ref|XP_001862421.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167873643|gb|EDS37026.1| conserved hypothetical protein [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 295/743 (39%), Positives = 428/743 (57%), Gaps = 78/743 (10%)
Query: 806 YDLFGTT--DGFSGQDSASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNF 863
YDL+G T D ++ + + +PF+ F G NF F + DISLFHKLS T +
Sbjct: 114 YDLYGITNEDAHLYKERPDYSSYGRFPDPFEQFF--GHNFNFHDQDISLFHKLSITSKYY 171
Query: 864 EKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARR 923
E N +PKS TP +++FYSDWCF+C++ FKK++D L P GV F T++ +E L R+
Sbjct: 172 ETNIVPKSRHTPQILMFYSDWCFSCMKAANSFKKMIDTLEPFGVTFATINAGHENQLVRK 231
Query: 924 LGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWR 983
+GV S LP + ++ D +KE ++ Q++VEF R KLPYKL+ + ++VD+FL+ W
Sbjct: 232 VGVHS-LPCVIMVLDEHNYVYKESVYNTQRVVEFIRQKLPYKLLPNIDDSSVDSFLNGW- 289
Query: 984 EDNKVHALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLL 1043
DN+V A++ + RLRYLI AF R + FG + + + + + +R+K+ D+LL
Sbjct: 290 SDNRVRAIVMEPRTQPRLRYLITAFHFRERVAFGFVQLNSQKTQRIQERYKIHPSLDTLL 349
Query: 1044 IFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPV------KKLC 1097
IF E+ RP ASI+M+ IP TL +I N YL LPR+SSQSML+ VCP K+LC
Sbjct: 350 IFNEEPSRPVASISMSDIPTATLNNIISVNKYLALPRLSSQSMLEGVCPAEWNRPRKRLC 409
Query: 1098 VVLFSEDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISL 1157
VVL +E+ P HD +RH +RR A ES + + F Y++ EKQ EF++AL E L
Sbjct: 410 VVLVTENIPTHDEARHAMRRIALESNYSPERVRFAYIYQEKQAEFIDALAEHSKLDETVL 469
Query: 1158 HIAAMWRMDYKKIKYGWLLGDAVDDWK------------------------DYNTTKDRL 1193
+ +WR D K +KY W+ G ++ +YN TK ++
Sbjct: 470 KVVIIWRRDTKHVKYEWVHGATLERLDKSGGGEGGGAEGGSGAVENETHEINYNNTKQKV 529
Query: 1194 DAGLRSLVNDPYNNLLYDTALKEISDEYIQSLGVRIFNRIFMHIEMAQQSLSRQHILPAV 1253
D ++ L+ L Y+ +K++ DE+ Q L VRI N+ M E +L ++HILPA+
Sbjct: 530 DGAIQRLLRSS-EALTYEAEVKDLLDEHAQGLVVRILNKFLMAFEYMTDNLGQEHILPAL 588
Query: 1254 SLIFTVIIIVVLAMIMNHYMKLEEEEIPSTTSSMRNHSVNKEKKHKETKQ---ELKLHAL 1310
S++ T+ I+ +M++ +++EEE I + S N + ++ +T EL+LH L
Sbjct: 589 SVVGTIAFILGAGYLMSYLVRIEEENI------QKKQSKNPDDRNGKTMNYVPELRLHEL 642
Query: 1311 RAETYNGLVVLLKPGCRTLILFIDNKSSRKLVSKFHAMVWPYRKNKSLMFGYLNIERKQS 1370
RAE YNGLV LLKPGCRT++L D +S KL+ FH VWPYRKNK+LMF ++ IE+
Sbjct: 643 RAEKYNGLVRLLKPGCRTIVLLTDLQSRNKLIPAFHKAVWPYRKNKTLMFAHMLIEKGIG 702
Query: 1371 REWFKDILLEALPPDTPLAINPRNCIGTVLSINGYRKYFCMYHA-------------KLT 1417
W+ ++L +L + INPRNCIGTV+++NG+RKYFCMYHA K+T
Sbjct: 703 --WYAELLRLSLSESREMKINPRNCIGTVIALNGHRKYFCMYHAKHPESNRGAKRMMKMT 760
Query: 1418 GQYGSKSKDNTIKGKGLGAYLGYNDSDYSDTDEEADLERGLHKHKAEPPPEYLLEDKLLD 1477
Q + D GA+LG + SD + + P+ LLE+ LLD
Sbjct: 761 RQLSTMPSDPEA-----GAFLGMDSSDSETSTSDFS------------EPKILLEENLLD 803
Query: 1478 GFPNWLDRLFEGTTPRFYVEAWP 1500
G PNWLDRLFEGTT R+Y+ WP
Sbjct: 804 GLPNWLDRLFEGTTHRYYINYWP 826
|
Source: Culex quinquefasciatus Species: Culex quinquefasciatus Genus: Culex Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|312380617|gb|EFR26558.1| hypothetical protein AND_07273 [Anopheles darlingi] | Back alignment and taxonomy information |
|---|
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 292/726 (40%), Positives = 421/726 (57%), Gaps = 56/726 (7%)
Query: 806 YDLFGTT--DGFSGQDSASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNF 863
YD +G T D ++ ++ +PF+ F NF F + DISL+H+LS T +
Sbjct: 90 YDQYGITNEDAIVNRERPDYTTYSRFQDPFEH-FYGAHNFNFHDQDISLYHRLSITAKYY 148
Query: 864 EKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARR 923
E N +PKS TP +++FY+DWCF C++ FKK++D L P GV F T++ +E+ L RR
Sbjct: 149 ETNILPKSRQTPQILMFYADWCFDCMKAANSFKKMIDTLEPYGVTFATINAGHEEQLVRR 208
Query: 924 LGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWR 983
GV S LP I ++ DG ++E F+ Q +V+F R K+PYKL+ P++ +DAFL W
Sbjct: 209 TGVHS-LPCIVMVLDGHNYIYRESVFNAQHLVDFIRQKMPYKLLTPVTDDTLDAFLAGW- 266
Query: 984 EDNKVHALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLL 1043
DN+ AL+ + + RLRYLI AF R + FG + + + + +RFK D+LL
Sbjct: 267 TDNRARALILEPRVQPRLRYLITAFHFRERVAFGFVALNGHATRHIQERFKNHPSLDTLL 326
Query: 1044 IFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPV------KKLC 1097
+F E RP ASI+M+ IP TL ++ N +L LPR+SSQ +LD VCPV K+LC
Sbjct: 327 LFNEFPARPVASISMSDIPTLTLNNVIGVNKFLVLPRLSSQPVLDGVCPVEWNRPRKRLC 386
Query: 1098 VVLFSEDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPED-SSEIS 1156
VVL +E++ HD +R LRR A ES F + F Y++ EKQ EF+ AL+ +
Sbjct: 387 VVLVTENTSLHDGARQMLRRIALESSFSRERVRFAYIYREKQDEFIGALSQNNQLLQDAL 446
Query: 1157 LHIAAMWRMDYKKIKYGWL--------LGDAVDDWKD--YNTTKDRLDAGLRSLVNDPYN 1206
L + +WR D K I+Y WL A ++ D +N+TK ++D+ ++ L+
Sbjct: 447 LKLVILWRRDTKHIRYEWLHEVVLQVDRASAENETHDQFFNSTKHKVDSAIQRLLRTS-E 505
Query: 1207 NLLYDTALKEISDEYIQSLGVRIFNRIFMHIEMAQQSLSRQHILPAVSLIFTVIIIVVLA 1266
L Y+ +K++ DE+ Q L +R+ NR+ + IE ++ ++HILPA+S+I T+ I ++
Sbjct: 506 ALSYEAEVKDLLDEHAQCLAIRMLNRLLLAIEFMTDNVGQEHILPALSVIGTIAFIFIIG 565
Query: 1267 MIMNHYMKLEEEEIPSTTSSMRNHSVNKEKKHKETKQELKLHALRAETYNGLVVLLKPGC 1326
+M++ ++LEEE+I + N K EL+LH LRAE YNGLV LLKPGC
Sbjct: 566 YLMSYLLRLEEEDIQQKQG---KNLENMNGKASSYVPELRLHELRAEKYNGLVRLLKPGC 622
Query: 1327 RTLILFIDNKSSRKLVSKFHAMVWPYRKNKSLMFGYLNIERKQSREWFKDILLEALPPDT 1386
RT++L D +S KL+S FH VWPYRKNK+LMF ++ IE+ W+ ++L +L
Sbjct: 623 RTIVLLTDMQSRPKLISAFHKAVWPYRKNKTLMFAHMLIEKGIG--WYAELLRLSLSESR 680
Query: 1387 PLAINPRNCIGTVLSINGYRKYFCMYHAK-LTGQYGSKSKDNTIK-------GKGLGAYL 1438
+ INPRNCIGTV+++NG+RKYFCMYHAK G+K + GA+L
Sbjct: 681 EMKINPRNCIGTVIALNGHRKYFCMYHAKHPESNRGAKRMIKMTRHLTSMPSDPEAGAFL 740
Query: 1439 GYNDSD----YSDTDEEADLERGLHKHKAEPPPEYLLEDKLLDGFPNWLDRLFEGTTPRF 1494
G SD SD E P+ LLE+ LLDG PNWLDRLFEGTT R+
Sbjct: 741 GMESSDSEASMSDVSE----------------PKILLEENLLDGLPNWLDRLFEGTTHRY 784
Query: 1495 YVEAWP 1500
Y+ WP
Sbjct: 785 YINYWP 790
|
Source: Anopheles darlingi Species: Anopheles darlingi Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1578 | ||||||
| FB|FBgn0058178 | 780 | CG40178 [Drosophila melanogast | 0.422 | 0.855 | 0.347 | 2.1e-116 | |
| RGD|1305504 | 582 | Adck5 "aarF domain containing | 0.125 | 0.340 | 0.570 | 4.4e-72 | |
| UNIPROTKB|F1LZB8 | 582 | Adck5 "Protein Adck5" [Rattus | 0.125 | 0.340 | 0.570 | 4.4e-72 | |
| MGI|MGI:2679274 | 582 | Adck5 "aarF domain containing | 0.125 | 0.340 | 0.565 | 1.5e-71 | |
| UNIPROTKB|Q3MIX3 | 580 | ADCK5 "Uncharacterized aarF do | 0.125 | 0.341 | 0.575 | 4.9e-71 | |
| WB|WBGene00001026 | 813 | dnj-8 [Caenorhabditis elegans | 0.206 | 0.400 | 0.268 | 1.6e-56 | |
| ZFIN|ZDB-GENE-081104-149 | 579 | adck5 "aarF domain containing | 0.124 | 0.338 | 0.556 | 1.1e-70 | |
| UNIPROTKB|F1RSN7 | 581 | ADCK5 "Uncharacterized protein | 0.125 | 0.340 | 0.565 | 4.6e-70 | |
| UNIPROTKB|F1PC36 | 583 | ADCK5 "Uncharacterized protein | 0.125 | 0.339 | 0.560 | 4.2e-69 | |
| UNIPROTKB|F1N2C7 | 580 | F1N2C7 "Uncharacterized protei | 0.125 | 0.341 | 0.550 | 2.7e-67 |
| FB|FBgn0058178 CG40178 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1147 (408.8 bits), Expect = 2.1e-116, P = 2.1e-116
Identities = 248/714 (34%), Positives = 413/714 (57%)
Query: 806 YDLFGTTDGFSGQDSASRNFHNHMYNPF-----DDVFSEGFNFPFEEHDISLFHKLSTTH 860
+D +G +D + Q ++ ++ YN F DD F + F+ + DI+ + KLS T
Sbjct: 90 FDRYGVSD-INSQYFQKKHDYSE-YNRFTLNQNDDDFGQRFDI---KQDIAFYQKLSITE 144
Query: 861 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGL 920
FEK + K+ H+++FY+DWCF C ++ FKK+++ L P+G+ F TV+ +E+ +
Sbjct: 145 NYFEKMILSKNAKKVHVVMFYNDWCFKCTRIVDAFKKILELLQPIGINFATVNAVHEESV 204
Query: 921 ARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLD 980
R+ G ++PQ+ L+ D + +++ SF+ QK+VEF R K+P+ + + N + FL
Sbjct: 205 FRKCGA-REVPQLVLILDNQYFLYRDHSFTPQKVVEFIRKKIPFNVFKRIEHDNFNDFLG 263
Query: 981 NWREDNKVHALLFQ-RSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDK 1039
W DN+ AL+F+ RSL RLRYL+ AF+ + FG + +DSS++ RFKV
Sbjct: 264 GW-SDNRARALIFEPRSL-TRLRYLLTAFEFYDRVAFGFVNTISKDSSNIITRFKVNTSL 321
Query: 1040 DSLLIFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPV------ 1093
D+L++F ED +AS+ M IP L ++ N +L PRISSQ+++++VCP
Sbjct: 322 DTLILFNEDTTTFTASVCMEEIPNHILVNMVSTNQFLAFPRISSQNIMESVCPTEWNRQR 381
Query: 1094 KKLCVVLFSEDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSS 1153
K LCV+L +E++ + D R LR A + + F Y+F E QP+F+ +++
Sbjct: 382 KHLCVILITENNRKKDFERVALRNIALSVGYNSEKVRFAYIFKESQPDFIKSISKGSFKD 441
Query: 1154 EISLHIAAMWRMDYKKIKYGWLL-----GDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNL 1208
+ + I +WR D K+IKY W+ G++ + N+TKD++ ++ L+ + L
Sbjct: 442 SL-IEIVIIWRRDKKRIKYNWVYVAKQNGNSSPEHL-MNSTKDQISNAVKKLLKNS-EAL 498
Query: 1209 LYDTALKEISDEYIQSLGVRIFNRIFMHIEMAQQSLSRQHILPAVSLIFTVIIIVVLAMI 1268
Y+ ++ + +E+ Q + + ++ ++ ++ +H+L SL+ T+ + + +
Sbjct: 499 CYEAIVENLFNEHSQGILTKWISQFLYVVDYLSDNIEDEHLLAVFSLLGTIAFMFTVGYV 558
Query: 1269 MNHYMKLEEEEIPSTTSSMRNHSVN-KEKKHKETKQELKLHALRAETYNGLVVLLKPGCR 1327
+ +++++EE+ + + H ++ ++++H ELKL+ LRAE YNG+V LLKPGCR
Sbjct: 559 LIYFVRVEEKYLKA-----HGHLIDIQDQRHINLIPELKLYELRAEKYNGMVRLLKPGCR 613
Query: 1328 TLILFIDNKSSRKLVSKFHAMVWPYRKNKSLMFGYLNIERKQSREWFKDILLEALPPDTP 1387
TL+L D +S KL+ FH VWPYRK+K+L+FG++ IER WF +IL +L +
Sbjct: 614 TLLLINDCQSRHKLIPYFHKAVWPYRKSKTLLFGHMVIER--GLPWFAEILRLSLSKNRH 671
Query: 1388 LAINPRNCIGTVLSINGYRKYFCMYHAKLT-GQYGSKSKDNTIKGKGLGAYLGYNDSDYS 1446
L +NPRNC+GTVL++NG+RKYFCMYHAK G+K T+K L N+
Sbjct: 672 LQVNPRNCVGTVLALNGHRKYFCMYHAKHPESALGTK---RTLKNTQ--KLLDANE---- 722
Query: 1447 DTDEEADLERGLHKHKAEPPPEYLLEDKLLDGFPNWLDRLFEGTTPRFYVEAWP 1500
D + L+R + ++E P LLED LL+G NWL+RLF+G T ++Y+ WP
Sbjct: 723 DPEIGTFLKRDFSE-ESESEPNILLEDNLLNGLDNWLERLFDGRTQKYYINYWP 775
|
|
| RGD|1305504 Adck5 "aarF domain containing kinase 5" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 598 (215.6 bits), Expect = 4.4e-72, Sum P(2) = 4.4e-72
Identities = 113/198 (57%), Positives = 145/198 (73%)
Query: 373 QALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAV 432
+ L+DK L R EVD+LFLEDF S+LF+ FD P+AAASLAQV RA ++G VAV
Sbjct: 168 RVLEDKALTRGFREVDELFLEDFQALPSELFQEFDYEPMAAASLAQVHRAKLQDGTAVAV 227
Query: 433 KVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAER 492
KVQYIDLR+RF GD+ T++ LLR+ ++P F F WV+ +LK L QELDF NEGRN+ER
Sbjct: 228 KVQYIDLRDRFDGDVHTLELLLRLVELMHPSFGFSWVLQDLKGTLAQELDFENEGRNSER 287
Query: 493 CSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF 552
C+++L H +V IPR+ WDKSS RVLT +F DG K++D EG+ +G ++ DV KL F
Sbjct: 288 CAQELKHFHHVVIPRVYWDKSSKRVLTADFCDGCKVNDMEGIKSQGLAVQDVATKLIQTF 347
Query: 553 AEQIFQTGFVHADPHSGN 570
AEQIF TGF+H+DPH GN
Sbjct: 348 AEQIFHTGFIHSDPHPGN 365
|
|
| UNIPROTKB|F1LZB8 Adck5 "Protein Adck5" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 598 (215.6 bits), Expect = 4.4e-72, Sum P(2) = 4.4e-72
Identities = 113/198 (57%), Positives = 145/198 (73%)
Query: 373 QALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAV 432
+ L+DK L R EVD+LFLEDF S+LF+ FD P+AAASLAQV RA ++G VAV
Sbjct: 168 RVLEDKALTRGFREVDELFLEDFQALPSELFQEFDYEPMAAASLAQVHRAKLQDGTAVAV 227
Query: 433 KVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAER 492
KVQYIDLR+RF GD+ T++ LLR+ ++P F F WV+ +LK L QELDF NEGRN+ER
Sbjct: 228 KVQYIDLRDRFDGDVHTLELLLRLVELMHPSFGFSWVLQDLKGTLAQELDFENEGRNSER 287
Query: 493 CSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF 552
C+++L H +V IPR+ WDKSS RVLT +F DG K++D EG+ +G ++ DV KL F
Sbjct: 288 CAQELKHFHHVVIPRVYWDKSSKRVLTADFCDGCKVNDMEGIKSQGLAVQDVATKLIQTF 347
Query: 553 AEQIFQTGFVHADPHSGN 570
AEQIF TGF+H+DPH GN
Sbjct: 348 AEQIFHTGFIHSDPHPGN 365
|
|
| MGI|MGI:2679274 Adck5 "aarF domain containing kinase 5" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 597 (215.2 bits), Expect = 1.5e-71, Sum P(2) = 1.5e-71
Identities = 112/198 (56%), Positives = 146/198 (73%)
Query: 373 QALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAV 432
+ L+DK L R EVD+LFLEDF ++LF+ FD P+AAASLAQV RA +G +VAV
Sbjct: 168 RVLEDKALTRGFREVDELFLEDFQALPNELFQEFDYEPMAAASLAQVHRAKLHDGTDVAV 227
Query: 433 KVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAER 492
KVQYIDLR+RF GD+ T++ LLR+ ++P F F WV+ +LK L QELDF NEGRNAER
Sbjct: 228 KVQYIDLRDRFDGDVQTLELLLRLVELMHPSFGFSWVLQDLKGTLVQELDFENEGRNAER 287
Query: 493 CSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF 552
C+++L H YV IPR+ WD+SS RVLT +F +G K++D EG+ +G ++ DV +KL F
Sbjct: 288 CAQELKHFHYVVIPRVHWDRSSKRVLTADFCNGCKVNDMEGIKSQGLAVQDVAKKLIQTF 347
Query: 553 AEQIFQTGFVHADPHSGN 570
AEQIF TGF+H+DPH GN
Sbjct: 348 AEQIFHTGFIHSDPHPGN 365
|
|
| UNIPROTKB|Q3MIX3 ADCK5 "Uncharacterized aarF domain-containing protein kinase 5" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 598 (215.6 bits), Expect = 4.9e-71, Sum P(2) = 4.9e-71
Identities = 114/198 (57%), Positives = 144/198 (72%)
Query: 373 QALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAV 432
+ L+D+ L R EVD+LFLEDF +LF+ FD PIAAASLAQV RA +G VAV
Sbjct: 168 RVLEDRALKRGFQEVDELFLEDFQALPHELFQEFDYQPIAAASLAQVHRAKLHDGTSVAV 227
Query: 433 KVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAER 492
KVQYIDLR+RF GDI T++ LLR+ ++P F F WV+ +LK L QELDF NEGRNAER
Sbjct: 228 KVQYIDLRDRFDGDIHTLELLLRLVEVMHPSFGFSWVLQDLKGTLAQELDFENEGRNAER 287
Query: 493 CSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF 552
C+++LAH PYV +PR+ WDKSS RVLT +F G K++D E + +G ++ D+ KL AF
Sbjct: 288 CARELAHFPYVVVPRVHWDKSSKRVLTADFCAGCKVNDVEAIRSQGLAVHDIAEKLIKAF 347
Query: 553 AEQIFQTGFVHADPHSGN 570
AEQIF TGF+H+DPH GN
Sbjct: 348 AEQIFYTGFIHSDPHPGN 365
|
|
| WB|WBGene00001026 dnj-8 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 350 (128.3 bits), Expect = 1.6e-56, Sum P(2) = 1.6e-56
Identities = 96/357 (26%), Positives = 180/357 (50%)
Query: 806 YDLFGTTDGFSG-QDSASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLF-HKLSTTHWNF 863
YD FGT D +D+A R + + F GF F D S+F +K ++ +
Sbjct: 82 YDRFGTFDDVKQFEDNAERARSFYGFGGFG-----GFGF-----DESVFEYKYRMSYQQY 131
Query: 864 EKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARR 923
+ + +S T P+++ YS++C C + P +K+++ +L PLG G TV+ + EQ L +
Sbjct: 132 QFKILEESNTKPYIVYIYSNYCQMCYRFHPQWKRVIADLEPLGYGIATVNGNREQNLMEK 191
Query: 924 LGVGSQLPQIALLTDGRTSFFK-EPSFSVQKMVEFFRLKLPYKLIVPL-SATNVDAFLDN 981
+ + S +P + + +GR + + SFS + +V F + +P + + S + F+D
Sbjct: 192 MRI-SHVPALVAIVEGRIIPMRIDSSFSDRSIVAFAQKVIPSYFMTKINSGVMLSRFVDQ 250
Query: 982 WREDNKVHALLFQRSLPVRLRYLINAFKHRTTIVFGVI-VYDQEDSSSVFQR-FKVPGDK 1039
W+ NK+ ++F + R+RYL+ A K+ F + + D D + + + +
Sbjct: 251 WKSSNKISVVIFGAAANPRIRYLLAAMKYSQFARFAYVSLSDSSDEVRILRESVDIKCVQ 310
Query: 1040 -DSLLIF----KEDK-DRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPV 1093
+++LI+ ED DR S S + + + + + N LTLPR+SSQ +LD VCPV
Sbjct: 311 CENILIYGDMEHEDAVDRLSIS-EAKKLTMEAIDEFIERNKVLTLPRLSSQELLDEVCPV 369
Query: 1094 -----KKLCVVLFSEDSPEHDASRHTLRRFAQESRFVHNN--IAFMYVFIEKQPEFV 1143
+ LCV+L + RR+ ++++ + + + F Y++++KQ ++V
Sbjct: 370 SSRSPRHLCVILPVTSHSSEEEHVDAFRRYVKDTKSIWKSKKVNFSYIYVDKQKDWV 426
|
|
| ZFIN|ZDB-GENE-081104-149 adck5 "aarF domain containing kinase 5" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 571 (206.1 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 109/196 (55%), Positives = 140/196 (71%)
Query: 375 LQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKV 434
L+DK L R EVD LF EDF T ++FR+FD P+AAASLAQV +A +G VAVKV
Sbjct: 170 LEDKALNRRYKEVDALFQEDFNMTPDKMFRTFDYEPVAAASLAQVHKAELHDGTPVAVKV 229
Query: 435 QYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAERCS 494
QYIDLR+RF GDI T++ LL + F++P F F+WV+ +LK L QELDF NEGRN+ERC+
Sbjct: 230 QYIDLRDRFDGDIRTLEILLDVIKFMHPSFGFRWVLQDLKGTLAQELDFENEGRNSERCA 289
Query: 495 KDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAE 554
++L H +V +P++ WD +S RVLT E+ DG KI++ E + +G SL D KL FAE
Sbjct: 290 EELKHFKFVVVPKVFWDVTSKRVLTAEYCDGCKINNVEEIQRQGLSLKDTADKLIRIFAE 349
Query: 555 QIFQTGFVHADPHSGN 570
QIF TGF+HADPH GN
Sbjct: 350 QIFYTGFIHADPHPGN 365
|
|
| UNIPROTKB|F1RSN7 ADCK5 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 587 (211.7 bits), Expect = 4.6e-70, Sum P(2) = 4.6e-70
Identities = 112/198 (56%), Positives = 142/198 (71%)
Query: 373 QALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAV 432
+ L+D+ L R EVD+LFLEDF +LFR FD PIAAASLAQV RA +G EVAV
Sbjct: 169 RVLEDRALTRGIQEVDELFLEDFQAPPRELFRDFDYQPIAAASLAQVHRARLHDGTEVAV 228
Query: 433 KVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAER 492
KVQYIDLR+RF GDI T++ LL++ ++P F F WV+ +LK L QELDF NEGRNAER
Sbjct: 229 KVQYIDLRDRFEGDIHTLELLLQLVELMHPSFGFSWVLQDLKGTLAQELDFENEGRNAER 288
Query: 493 CSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF 552
C+++L H YV +PR+ WD SS RVLT +F +G K++D E + G ++ D+ KL AF
Sbjct: 289 CARELRHFRYVVVPRVHWDTSSKRVLTADFYEGCKVNDVEAIKTMGLAVRDIAEKLIQAF 348
Query: 553 AEQIFQTGFVHADPHSGN 570
AEQIF TGF+H+DPH GN
Sbjct: 349 AEQIFYTGFIHSDPHPGN 366
|
|
| UNIPROTKB|F1PC36 ADCK5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 576 (207.8 bits), Expect = 4.2e-69, Sum P(2) = 4.2e-69
Identities = 111/198 (56%), Positives = 140/198 (70%)
Query: 373 QALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAV 432
+ L+D+ L R EVD+LFLEDF +LF FD PIAAASLAQV RA +G VAV
Sbjct: 171 RVLEDRALTRGFQEVDELFLEDFQAPPHKLFLEFDYQPIAAASLAQVHRARLHDGTAVAV 230
Query: 433 KVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAER 492
KVQYIDLR+RF GDI T++ LL++ ++P F F WV+ +LK L QELDF NEGRNAER
Sbjct: 231 KVQYIDLRDRFDGDIHTLELLLQLVELMHPSFGFSWVLQDLKGTLAQELDFENEGRNAER 290
Query: 493 CSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF 552
C+++L H YV +PR+ WD SS RVLT EF +G K++D E + G ++ D+ KL AF
Sbjct: 291 CARELQHFHYVVVPRVHWDTSSKRVLTAEFCEGCKVNDLEAIKSMGLAVKDIAEKLIQAF 350
Query: 553 AEQIFQTGFVHADPHSGN 570
AEQIF TGF+H+DPH GN
Sbjct: 351 AEQIFYTGFIHSDPHPGN 368
|
|
| UNIPROTKB|F1N2C7 F1N2C7 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 566 (204.3 bits), Expect = 2.7e-67, Sum P(2) = 2.7e-67
Identities = 109/198 (55%), Positives = 139/198 (70%)
Query: 373 QALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAV 432
+ L+D+ L R EVD+LFLEDF +LF+ FD PIAAASLAQV RA +G VAV
Sbjct: 168 RVLEDRALTRGFREVDELFLEDFQAPPHELFQEFDYQPIAAASLAQVHRARLHDGTVVAV 227
Query: 433 KVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAER 492
KVQYIDLR+RF GDI T++ LL + ++P F F WV+ +LK L QELDF NEGRNAER
Sbjct: 228 KVQYIDLRDRFDGDIHTLELLLHLVELMHPSFGFSWVLQDLKGTLAQELDFENEGRNAER 287
Query: 493 CSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF 552
C+++L H +V +PR+ W SS RVLT EF +G K++D E + G ++ D+ KL AF
Sbjct: 288 CARELQHFRHVVVPRVHWGTSSKRVLTAEFYEGCKVNDVEAIQSMGLAVQDIAEKLIKAF 347
Query: 553 AEQIFQTGFVHADPHSGN 570
AEQIF TGF+H+DPH GN
Sbjct: 348 AEQIFYTGFIHSDPHPGN 365
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1578 | |||
| COG0661 | 517 | COG0661, AarF, Predicted unusual protein kinase [G | 8e-55 | |
| TIGR01982 | 437 | TIGR01982, UbiB, 2-polyprenylphenol 6-hydroxylase | 4e-48 | |
| pfam03109 | 117 | pfam03109, ABC1, ABC1 family | 6e-43 | |
| cd02963 | 111 | cd02963, TRX_DnaJ, TRX domain, DnaJ domain contain | 6e-36 | |
| TIGR02349 | 354 | TIGR02349, DnaJ_bact, chaperone protein DnaJ | 2e-28 | |
| COG0484 | 371 | COG0484, DnaJ, DnaJ-class molecular chaperone with | 4e-28 | |
| pfam00226 | 63 | pfam00226, DnaJ, DnaJ domain | 8e-25 | |
| PRK04750 | 537 | PRK04750, ubiB, putative ubiquinone biosynthesis p | 1e-24 | |
| PRK14291 | 382 | PRK14291, PRK14291, chaperone protein DnaJ; Provis | 2e-24 | |
| PRK14298 | 377 | PRK14298, PRK14298, chaperone protein DnaJ; Provis | 5e-23 | |
| PRK14283 | 378 | PRK14283, PRK14283, chaperone protein DnaJ; Provis | 2e-22 | |
| cd02963 | 111 | cd02963, TRX_DnaJ, TRX domain, DnaJ domain contain | 5e-22 | |
| PRK10767 | 371 | PRK10767, PRK10767, chaperone protein DnaJ; Provis | 7e-22 | |
| PRK14292 | 371 | PRK14292, PRK14292, chaperone protein DnaJ; Provis | 6e-21 | |
| PRK14276 | 380 | PRK14276, PRK14276, chaperone protein DnaJ; Provis | 2e-20 | |
| PRK14280 | 376 | PRK14280, PRK14280, chaperone protein DnaJ; Provis | 2e-20 | |
| PRK14299 | 291 | PRK14299, PRK14299, chaperone protein DnaJ; Provis | 3e-20 | |
| PRK14301 | 373 | PRK14301, PRK14301, chaperone protein DnaJ; Provis | 4e-20 | |
| PRK14282 | 369 | PRK14282, PRK14282, chaperone protein DnaJ; Provis | 1e-19 | |
| PRK14294 | 366 | PRK14294, PRK14294, chaperone protein DnaJ; Provis | 2e-19 | |
| smart00271 | 60 | smart00271, DnaJ, DnaJ molecular chaperone homolog | 2e-19 | |
| cd06257 | 55 | cd06257, DnaJ, DnaJ domain or J-domain | 2e-19 | |
| PRK14281 | 397 | PRK14281, PRK14281, chaperone protein DnaJ; Provis | 1e-18 | |
| PRK14296 | 372 | PRK14296, PRK14296, chaperone protein DnaJ; Provis | 2e-18 | |
| PRK14277 | 386 | PRK14277, PRK14277, chaperone protein DnaJ; Provis | 3e-18 | |
| PRK14297 | 380 | PRK14297, PRK14297, chaperone protein DnaJ; Provis | 6e-18 | |
| PRK14295 | 389 | PRK14295, PRK14295, chaperone protein DnaJ; Provis | 9e-18 | |
| PRK14290 | 365 | PRK14290, PRK14290, chaperone protein DnaJ; Provis | 2e-17 | |
| PRK14284 | 391 | PRK14284, PRK14284, chaperone protein DnaJ; Provis | 3e-17 | |
| PRK14287 | 371 | PRK14287, PRK14287, chaperone protein DnaJ; Provis | 2e-16 | |
| PRK14289 | 386 | PRK14289, PRK14289, chaperone protein DnaJ; Provis | 4e-16 | |
| PRK14278 | 378 | PRK14278, PRK14278, chaperone protein DnaJ; Provis | 5e-16 | |
| COG2214 | 237 | COG2214, CbpA, DnaJ-class molecular chaperone [Pos | 6e-16 | |
| PRK14286 | 372 | PRK14286, PRK14286, chaperone protein DnaJ; Provis | 6e-16 | |
| PRK14293 | 374 | PRK14293, PRK14293, chaperone protein DnaJ; Provis | 8e-16 | |
| PRK14285 | 365 | PRK14285, PRK14285, chaperone protein DnaJ; Provis | 6e-15 | |
| PRK14279 | 392 | PRK14279, PRK14279, chaperone protein DnaJ; Provis | 2e-14 | |
| PRK14300 | 372 | PRK14300, PRK14300, chaperone protein DnaJ; Provis | 1e-13 | |
| PTZ00037 | 421 | PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov | 2e-13 | |
| PRK10266 | 306 | PRK10266, PRK10266, curved DNA-binding protein Cbp | 5e-13 | |
| COG0661 | 517 | COG0661, AarF, Predicted unusual protein kinase [G | 8e-13 | |
| TIGR03835 | 871 | TIGR03835, termin_org_DnaJ, terminal organelle ass | 8e-13 | |
| pfam03870 | 137 | pfam03870, RNA_pol_Rpb8, RNA polymerase Rpb8 | 2e-12 | |
| smart00658 | 143 | smart00658, RPOL8c, RNA polymerase subunit 8 | 1e-10 | |
| COG5407 | 610 | COG5407, SEC63, Preprotein translocase subunit Sec | 1e-10 | |
| PRK14288 | 369 | PRK14288, PRK14288, chaperone protein DnaJ; Provis | 2e-10 | |
| TIGR01982 | 437 | TIGR01982, UbiB, 2-polyprenylphenol 6-hydroxylase | 3e-07 | |
| COG3118 | 304 | COG3118, COG3118, Thioredoxin domain-containing pr | 2e-06 | |
| PTZ00341 | 1136 | PTZ00341, PTZ00341, Ring-infected erythrocyte surf | 6e-06 | |
| cd02961 | 101 | cd02961, PDI_a_family, Protein Disulfide Isomerase | 2e-05 | |
| cd02947 | 93 | cd02947, TRX_family, TRX family; composed of two g | 3e-05 | |
| cd02956 | 96 | cd02956, ybbN, ybbN protein family; ybbN is a hypo | 8e-05 | |
| pfam03109 | 117 | pfam03109, ABC1, ABC1 family | 1e-04 | |
| TIGR01068 | 101 | TIGR01068, thioredoxin, thioredoxin | 3e-04 | |
| cd02994 | 101 | cd02994, PDI_a_TMX, PDIa family, TMX subfamily; co | 3e-04 | |
| COG1076 | 174 | COG1076, DjlA, DnaJ-domain-containing proteins 1 [ | 0.001 | |
| PRK09430 | 267 | PRK09430, djlA, Dna-J like membrane chaperone prot | 0.001 | |
| pfam00085 | 104 | pfam00085, Thioredoxin, Thioredoxin | 0.002 | |
| PRK01356 | 166 | PRK01356, hscB, co-chaperone HscB; Provisional | 0.004 | |
| PTZ00443 | 224 | PTZ00443, PTZ00443, Thioredoxin domain-containing | 0.004 |
| >gnl|CDD|223733 COG0661, AarF, Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Score = 200 bits (510), Expect = 8e-55
Identities = 92/289 (31%), Positives = 135/289 (46%), Gaps = 49/289 (16%)
Query: 286 VHQRSANRILSMCLT-NGGLYIKLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQ 344
+ L + L G +IKLGQ + + ++P +Y L LQD+
Sbjct: 52 ELREKRAERLRLALEELGPTFIKLGQILSTRPDLVPPEYAEELAKLQDRV---------- 101
Query: 345 LFLEDFGCTHSQLFRSFDENPIAAASLAQALQDKCLLREKGEVDQLFLEDFGCTHSQLFR 404
+A +++ E+ G +LF
Sbjct: 102 ----------------------PPFPFEEA-------------ERIIEEELGRPIEELFS 126
Query: 405 SFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYP-- 462
F+ PIA+AS+AQV RAV K G EVAVKVQ +RER D+ ++ L R+ L P
Sbjct: 127 EFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGG 186
Query: 463 -KFDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTE 521
+ D V++E + L +ELD+ E NAER ++ P VY+P++ W+ ++ RVLT E
Sbjct: 187 RRLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTME 246
Query: 522 FIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHSGN 570
+IDG+KISD L G ++ L AF Q+ + GF HADPH GN
Sbjct: 247 WIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLRDGFFHADPHPGN 295
|
Length = 517 |
| >gnl|CDD|233667 TIGR01982, UbiB, 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Score = 178 bits (453), Expect = 4e-48
Identities = 73/199 (36%), Positives = 103/199 (51%), Gaps = 3/199 (1%)
Query: 375 LQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKV 434
LQD+ + ++ G +LF F+E P+AAAS+AQV RA +G EVAVKV
Sbjct: 89 LQDRVPPFDFKVARKVIEAALGGPLEELFAEFEEKPLAAASIAQVHRARLVDGKEVAVKV 148
Query: 435 QYIDLRERFVGDIATVQTLLRIAGFLYP---KFDFQWVINELKVPLEQELDFLNEGRNAE 491
+ + DIA + L RI L P + V+ E + L +ELD E NA
Sbjct: 149 LRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANAS 208
Query: 492 RCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTA 551
++ + P VY+P + WD++S RVLT E+IDG+ +SD L E G + L +
Sbjct: 209 ELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARS 268
Query: 552 FAEQIFQTGFVHADPHSGN 570
F Q+ + GF HAD H GN
Sbjct: 269 FLNQVLRDGFFHADLHPGN 287
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol -> 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 437 |
| >gnl|CDD|111949 pfam03109, ABC1, ABC1 family | Back alignment and domain information |
|---|
Score = 151 bits (385), Expect = 6e-43
Identities = 53/116 (45%), Positives = 77/116 (66%)
Query: 393 EDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQT 452
E+ G ++F FDE PIAAAS+AQV RAV K+G EVAVKVQ +++R D+ ++
Sbjct: 1 EELGAPVEEVFAEFDEEPIAAASIAQVHRAVLKDGEEVAVKVQRPGVKKRIRSDLKLLKF 60
Query: 453 LLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRI 508
L +I +P FD W+++E + L QELDFL E NAE+ ++ A LP+VY+P++
Sbjct: 61 LAKILKKFFPGFDLDWLVDEFRKSLPQELDFLREAANAEKFRENFADLPWVYVPKV 116
|
This family includes ABC1 from yeast and AarF from E. coli. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex and E. coli AarF is required for ubiquinone production. It has been suggested that members of the ABC1 family are novel chaperonins. These proteins are unrelated to the ABC transporter proteins. Length = 117 |
| >gnl|CDD|239261 cd02963, TRX_DnaJ, TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain | Back alignment and domain information |
|---|
Score = 132 bits (333), Expect = 6e-36
Identities = 45/112 (40%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
Query: 850 ISLFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGF 909
S +K S T +E +PKS+ P+LI SDWCF+C+ +EP++K+++ EL PLGVG
Sbjct: 1 DSFDYKYSLTFSQYENEIVPKSFKKPYLIKITSDWCFSCIHIEPVWKEVIQELEPLGVGI 60
Query: 910 FTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLK 961
TV+ +E+ LAR+LG +P I + +G+ +F+ + SF+ Q +V+F R
Sbjct: 61 ATVNAGHERRLARKLGA-HSVPAIVGIINGQVTFYHDSSFTKQHVVDFVRKL 111
|
DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network. Length = 111 |
| >gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 2e-28
Identities = 42/103 (40%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697
D YE LGV + AS +EI+K Y++L ++HPD+N D A+EKF ++ EAY +LSD E+R Q
Sbjct: 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQ 60
Query: 698 YDLFGTTD---GFSGQDSASRNFHNHMYNPFDDVFSEGFNFPF 737
YD FG G G F + F D+F + F
Sbjct: 61 YDQFGHAGFNGGGGGGGGGFNGFDIGFFGDFGDIFGDFFGGGG 103
|
This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354 |
| >gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 4e-28
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRK 696
D YE LGV + AS +EI+K Y++L ++HPD+N D A+EKF ++ EAY +LSD E+R
Sbjct: 5 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRA 64
Query: 697 QYDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEGF 733
YD FG GF F F D+F + F
Sbjct: 65 AYDQFG-HAGFKAGGFGGFGF-GGFGGDFGDIFEDFF 99
|
Length = 371 |
| >gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain | Back alignment and domain information |
|---|
Score = 98.4 bits (246), Expect = 8e-25
Identities = 36/63 (57%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNILSDAERRK 696
D YE LGVPR AS +EI+K Y++L +++HPDKN DP A+EKF ++ EAY +LSD E+R
Sbjct: 1 DYYEILGVPRDASDEEIKKAYRKLALKYHPDKNPGDPAAEEKFKEINEAYEVLSDPEKRA 60
Query: 697 QYD 699
YD
Sbjct: 61 IYD 63
|
DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63 |
| >gnl|CDD|235310 PRK04750, ubiB, putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 1e-24
Identities = 61/185 (32%), Positives = 85/185 (45%), Gaps = 14/185 (7%)
Query: 395 FGCTHSQLFRSFDENPIAAASLAQVFRAVTKE-GVEVAVKVQYIDLRERFVGDIATVQTL 453
G + F FD P+A+AS+AQV A K+ G EV VKV D+ D+A + L
Sbjct: 111 LGGPVEEWFDDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRL 170
Query: 454 LRIAGFLYPKFDF---QWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILW 510
R L P + V+ E + L ELD + E NA + ++ +Y+P + W
Sbjct: 171 ARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYW 230
Query: 511 DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLF-----TAFAEQIFQTGFVHAD 565
D S V+ E + G+ +SD L G D KL F Q+F+ GF HAD
Sbjct: 231 DYCSETVMVMERMYGIPVSDVAALRAAG-----TDMKLLAERGVEVFFTQVFRDGFFHAD 285
Query: 566 PHSGN 570
H GN
Sbjct: 286 MHPGN 290
|
Length = 537 |
| >gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 2e-24
Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697
D YE LGV R A+ +EI+K Y+RL ++HPD N +P A+EKF ++ EAY +LSD E+RK
Sbjct: 4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKL 63
Query: 698 YDLFGTTDGFSGQDSASRNFHNHMYNPF---DDVFSE---GFNF 735
YD FG FSG + +D+ + F F
Sbjct: 64 YDQFG-HAAFSGSGQQQQGQEGFSDFGGGNIEDILEDVFDIFGF 106
|
Length = 382 |
| >gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 103 bits (257), Expect = 5e-23
Identities = 45/100 (45%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
Query: 634 AVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAE 693
A + D YE LG+ + AS+++I+K Y++L +++HPDKN +P A+EKF +++EAY +LSDAE
Sbjct: 2 ATTRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAE 61
Query: 694 RRKQYDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEGF 733
+R QYD FG G Q SA F + F D+F F
Sbjct: 62 KRAQYDRFGHA-GIDNQYSAEDIFRGADFGGFGDIFEMFF 100
|
Length = 377 |
| >gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 2e-22
Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 10/103 (9%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697
D YE LGV R A +EI+K Y++L ++HPD + + A+EKF +++EAY +LSD E+R++
Sbjct: 6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQR 65
Query: 698 YDLFGTT--DGFSGQDSASRNFHNHMYNPFDDVFSEGFNFPFE 738
YD FG DGFS +D N++ F+D+F GF F
Sbjct: 66 YDQFGHAGMDGFSQED-----IFNNI--NFEDIFQ-GFGFGIG 100
|
Length = 378 |
| >gnl|CDD|239261 cd02963, TRX_DnaJ, TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain | Back alignment and domain information |
|---|
Score = 92.1 bits (229), Expect = 5e-22
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 742 ISLFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGF 801
S +K S T +E +PKS+ P+LI SDWCF+C+ +EP++K+++ EL PLGVG
Sbjct: 1 DSFDYKYSLTFSQYENEIVPKSFKKPYLIKITSDWCFSCIHIEPVWKEVIQELEPLGVGI 60
Query: 802 FTVH 805
TV+
Sbjct: 61 ATVN 64
|
DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network. Length = 111 |
| >gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 99.1 bits (248), Expect = 7e-22
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 17/105 (16%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNILSDAERRK 696
D YE LGV R AS EI+K Y++L +++HPD+N D A+EKF ++ EAY +LSD ++R
Sbjct: 5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRA 64
Query: 697 QYDLFG--------TTDGFSGQDSASRNFHNHMYNPFDDVFSEGF 733
YD +G GF G F + F D+F + F
Sbjct: 65 AYDQYGHAAFEQGGGGGGFGGGG----GFG----DIFGDIFGDIF 101
|
Length = 371 |
| >gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 96.5 bits (240), Expect = 6e-21
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 7/99 (7%)
Query: 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRK 696
+D YE LGV RTAS EI+ Y++L +++HPD+N + A EKF Q+ EAY +LSDAE+R
Sbjct: 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRA 61
Query: 697 QYDLFGTTD--GFSGQDSASRNFHNHMYNPFDDVFSEGF 733
YD FGT G G D F ++P D+F + F
Sbjct: 62 HYDRFGTAPGAGMPGGDP----FGGMGFDPM-DIFEQLF 95
|
Length = 371 |
| >gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 95.2 bits (237), Expect = 2e-20
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 16/106 (15%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697
+ Y+ LGV + AS EI+K Y++L ++HPD N +P A+EK+ ++ EAY LSD ++R
Sbjct: 5 EYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAA 64
Query: 698 YDLFGTTD----------GFSGQDSASRNFHNHMYNPFDDVFSEGF 733
YD +G GF G D + + F+D+FS F
Sbjct: 65 YDQYGAAGANGGFGGGAGGFGGFDGSGG------FGGFEDIFSSFF 104
|
Length = 380 |
| >gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 94.8 bits (236), Expect = 2e-20
Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697
D YE LGV ++AS EI+K Y++L ++HPD N + A EKF +++EAY +LSD ++R Q
Sbjct: 5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQ 64
Query: 698 YDLFGTTD---GFSGQDSASRNFHNHMYNPFDDVFSEGF 733
YD FG GF G +F F+D+FS F
Sbjct: 65 YDQFGHAGPNQGFGGGGFGGGDFGGGF--GFEDIFSSFF 101
|
Length = 376 |
| >gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 92.7 bits (230), Expect = 3e-20
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697
D Y LGVP+ AS EI+K +K+L ++HPD N P A+EKF ++ EAY +LSD E+R+
Sbjct: 5 DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRI 64
Query: 698 YDLFGTTDGFSGQDS------ASRNFHNHMYNPFDDVFSEGFNFP 736
YD +GTT +G +F F D F + F
Sbjct: 65 YDTYGTTAASAGWQGPPPGPPGGGDFSGFNVGDFSDFFQQLFGGR 109
|
Length = 291 |
| >gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 94.0 bits (234), Expect = 4e-20
Identities = 42/105 (40%), Positives = 64/105 (60%), Gaps = 5/105 (4%)
Query: 634 AVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNILSDA 692
D YE LGV R AS EI+K Y++L +++HPD+N ++P A++KF + EAY +L DA
Sbjct: 1 MSQRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDA 60
Query: 693 ERRKQYDLFGTTDGFSGQDSASRNFHNH--MYNPFDDVFSEGFNF 735
E+R +YD FG G +G F + +++ F D+F + F F
Sbjct: 61 EKRARYDRFG-HAGVNGNGGFG-GFSSAEDIFSHFSDIFGDLFGF 103
|
Length = 373 |
| >gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 92.5 bits (230), Expect = 1e-19
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 11/102 (10%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN--NDPTAQEKFLQLTEAYNILSDAERR 695
D YE LGV R A+ +EI++ YKRLV EWHPD++ N A++KF ++ EAY +LSD ++R
Sbjct: 5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKR 64
Query: 696 KQYDLFG-TTDG-FSGQDSASRNFHNHMYNPFDDVFSEGFNF 735
YD FG + + + F F+D+F + N
Sbjct: 65 AMYDRFGYVGEQPPYQETESGGGF-------FEDIFKDFENI 99
|
Length = 369 |
| >gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 92.1 bits (229), Expect = 2e-19
Identities = 42/100 (42%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNILSDAERRK 696
D YE LGV R AS +EI+K+Y++L +++HPD+N D A+E F + EAY +LSD ++R
Sbjct: 5 DYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRG 64
Query: 697 QYDLFGTTDGFSGQD-SASRNFHNHMYNPFDDVFSEGFNF 735
YD +G +G SG S F + +++ F D+F + F F
Sbjct: 65 IYDQYG-HEGLSGTGFSGFSGFDD-IFSSFGDIFEDFFGF 102
|
Length = 366 |
| >gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain | Back alignment and domain information |
|---|
Score = 83.1 bits (206), Expect = 2e-19
Identities = 32/59 (54%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN--NDPTAQEKFLQLTEAYNILSDAER 694
D YE LGVPR ASL EI+K Y++L +++HPDKN + A+EKF ++ EAY +LSD E+
Sbjct: 2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
|
Length = 60 |
| >gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain | Back alignment and domain information |
|---|
Score = 82.6 bits (205), Expect = 2e-19
Identities = 30/55 (54%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND-PTAQEKFLQLTEAYNILSD 691
D Y+ LGVP AS +EI+K Y++L +++HPDKN D P A+EKF ++ EAY +LSD
Sbjct: 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55
|
DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55 |
| >gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 89.5 bits (222), Expect = 1e-18
Identities = 42/117 (35%), Positives = 68/117 (58%), Gaps = 16/117 (13%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNILSDAERRK 696
D YE LGV R+A EI+K Y++L +++HPDKN ++ A+E F ++ EAY +LS+ ++R+
Sbjct: 4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRR 63
Query: 697 QYDLFG--------TTDGFSGQDSASRNFHNHMYNPFDDVFSEGFN------FPFEE 739
+YD FG + G G +F N +++ F+D+F G F FE+
Sbjct: 64 RYDQFGHAGVGSSAASGGGPGYGGGGGDF-NDIFSAFNDMFGGGARRGGGSPFGFED 119
|
Length = 397 |
| >gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 88.5 bits (219), Expect = 2e-18
Identities = 44/105 (41%), Positives = 63/105 (60%), Gaps = 9/105 (8%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697
D YE LGV +TAS QEIR+ Y++L ++HPD N P A +K +++ EA ++L D ++RKQ
Sbjct: 5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQ 64
Query: 698 YDLFGTT--DGFSGQDSASRNFHNHMYN-------PFDDVFSEGF 733
YD FG DG SG S +F + N F ++FS+ F
Sbjct: 65 YDQFGHAAFDGSSGFSSNFGDFEDLFSNMGSSGFSSFTNIFSDFF 109
|
Length = 372 |
| >gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 88.3 bits (219), Expect = 3e-18
Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 11/110 (10%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNILSDAERRK 696
D YE LGV R A+ +EI+K Y+RL ++HPD N D A++KF ++ EAY ILSD ++R
Sbjct: 6 DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRA 65
Query: 697 QYDLFG---------TTDGFSGQDSASRNFHNHMYNPFDDVFSEGFNFPF 737
QYD FG GF + + F D+F + F F
Sbjct: 66 QYDQFGHAAFDPGGFGQGGFGQGG-FGGGGFDFDFGGFGDIFEDIFGDFF 114
|
Length = 386 |
| >gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 87.5 bits (217), Expect = 6e-18
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNILSDAERRK 696
D YE LG+ + AS EI+K +++L +++HPDKN + A+EKF ++ EAY +LSD +++
Sbjct: 5 DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKA 64
Query: 697 QYDLFGTTD--GFSGQDSAS-RNFHNHMYNPFDDVFSEGF 733
QYD FGT D G G S F F D+F F
Sbjct: 65 QYDQFGTADFNGAGGFGSGGFGGFDFSDMGGFGDIFDSFF 104
|
Length = 380 |
| >gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 87.2 bits (216), Expect = 9e-18
Identities = 34/70 (48%), Positives = 51/70 (72%), Gaps = 5/70 (7%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNILSDAERRK 696
D Y+ LGVP+ A+ EI+K Y++L E+HPD N D A+E+F +++EAY++LSD ++RK
Sbjct: 10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRK 69
Query: 697 QYD----LFG 702
+YD LFG
Sbjct: 70 EYDEARSLFG 79
|
Length = 389 |
| >gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 85.8 bits (212), Expect = 2e-17
Identities = 42/103 (40%), Positives = 66/103 (64%), Gaps = 7/103 (6%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN--NDPTAQEKFLQLTEAYNILSDAERR 695
D Y+ LGV R AS ++I+K ++ L +WHPD + N A+EKF +++EAY +LSD ++R
Sbjct: 4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKR 63
Query: 696 KQYDLFGTTD-GFSGQDSASRNFHNHMYNPFDDVFSEGF--NF 735
+QYD GT D G G + NF + ++ +D+F++ F NF
Sbjct: 64 RQYDQTGTVDFGAGGSNFNWDNFTH--FSDINDIFNQIFGGNF 104
|
Length = 365 |
| >gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 85.3 bits (211), Expect = 3e-17
Identities = 35/75 (46%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Query: 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNILSDAERR 695
+D Y LGV +TAS +EI+K Y++L V++HPDKN D A+++F +++EAY +LSDA++R
Sbjct: 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKR 60
Query: 696 KQYDLFGTTDGFSGQ 710
+ YD +G F+G
Sbjct: 61 ESYDRYGKDGPFAGA 75
|
Length = 391 |
| >gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 82.7 bits (204), Expect = 2e-16
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 10/99 (10%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697
D YE LGV R AS+ E++K Y++L ++HPD N P A++KF ++ EAY+ LSD +++
Sbjct: 5 DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAH 64
Query: 698 YDLFGTTD---GFSGQDSASRNFHNHMYNPFDDVFSEGF 733
YD FG TD GF G + + F D+F F
Sbjct: 65 YDQFGHTDPNQGFGGGGAGD-------FGGFSDIFDMFF 96
|
Length = 371 |
| >gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 81.8 bits (202), Expect = 4e-16
Identities = 39/94 (41%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNILSDAERRK 696
D YE LGV +TA++ EI+K Y++ +++HPDKN D A+EKF + EAY++LSD ++R
Sbjct: 6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRS 65
Query: 697 QYDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFS 730
+YD FG G G +A + +D+FS
Sbjct: 66 RYDQFGHA-GVGG--AAGGGGFSGEGMSMEDIFS 96
|
Length = 386 |
| >gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 81.6 bits (202), Expect = 5e-16
Identities = 33/65 (50%), Positives = 43/65 (66%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697
D Y LGV R AS EI++ Y++L E HPD N D AQEKF +++ AY +LSD E+R+
Sbjct: 4 DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRI 63
Query: 698 YDLFG 702
DL G
Sbjct: 64 VDLGG 68
|
Length = 378 |
| >gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Score = 78.7 bits (193), Expect = 6e-16
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDP--TAQEKFLQLTEAYNILSDAE 693
LD YE LGVP ASL+EI+K Y++L +++HPD+N A+EKF ++ EAY ILSD E
Sbjct: 5 LLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPE 64
Query: 694 RRKQYDLFGTTDGFSGQDS-ASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLS 749
RR +YD G + F G+ S F ++ E + + L
Sbjct: 65 RRAEYDKIGADNYFPGKSYRESAAFPIEGSLQLTGLYEEWRGKRNKTERKASLADLL 121
|
Length = 237 |
| >gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 81.2 bits (200), Expect = 6e-16
Identities = 35/98 (35%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
Query: 640 YETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQY 698
Y+ LGV ++A+ +EI+ Y++L +++HPDKN + ++EKF + TEAY IL D ++R+ Y
Sbjct: 7 YDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAY 66
Query: 699 DLF---GTTDGFSGQDSASRNFHNHMYNPFDDVFSEGF 733
D F G G G + + ++ F D+F + F
Sbjct: 67 DQFGKAGVNAGAGGFGQGAYTDFSDIFGDFGDIFGDFF 104
|
Length = 372 |
| >gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 80.8 bits (200), Expect = 8e-16
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697
D YE LGV R A E+++ Y+RL ++HPD N +P A+++F ++ AY +LSD E R +
Sbjct: 4 DYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRAR 63
Query: 698 YDLFGTTDGFSG 709
YD FG G SG
Sbjct: 64 YDQFGEA-GVSG 74
|
Length = 374 |
| >gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 78.1 bits (192), Expect = 6e-15
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNILSDAERRK 696
D YE LG+ + AS EI+K Y+++ +++HPDKN + A+ F + TEAY +L D +R
Sbjct: 4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRA 63
Query: 697 QYDLFGTT-----DGFSGQDSASRNFHNHMYNPFDDVFSEGF 733
QYD FG T GF G F + ++ F D+F F
Sbjct: 64 QYDRFGHTAFEGGGGFEGFSGGFSGFSD-IFEDFGDIFDSFF 104
|
Length = 365 |
| >gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 76.7 bits (189), Expect = 2e-14
Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNILSDAERRK 696
D Y+ LGV AS +EI+K Y++L E HPD N DP A+E+F ++EA+++LSD +RK
Sbjct: 10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRK 69
Query: 697 QYD 699
+YD
Sbjct: 70 EYD 72
|
Length = 392 |
| >gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 74.3 bits (182), Expect = 1e-13
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 635 VSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAER 694
+S D Y+ LGV +TAS +++K Y +L ++HPD + A++KF ++ AY++L D ++
Sbjct: 1 MSQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQK 60
Query: 695 RKQYDLFGTTDGFSGQDS-----ASRNFHNHMYNPFDDVFSE 731
R YD FG D F Q S FH + + F D FS+
Sbjct: 61 RAAYDRFG-HDAFQNQQSRGGGGNHGGFHPDINDIFGDFFSD 101
|
Length = 372 |
| >gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional | Back alignment and domain information |
|---|
Score = 74.5 bits (183), Expect = 2e-13
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 640 YETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYD 699
YE L + + + EI+K Y++L ++ HPDK DP EKF +++ AY +LSD E+RK YD
Sbjct: 31 YEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDP---EKFKEISRAYEVLSDPEKRKIYD 87
Query: 700 LFGTTDGFSG 709
+G +G G
Sbjct: 88 EYG-EEGLEG 96
|
Length = 421 |
| >gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional | Back alignment and domain information |
|---|
Score = 71.4 bits (175), Expect = 5e-13
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697
D Y +GV T L+ I+ Y+RL ++HPD + +P A+ +F ++ EA+ +LSD +RR +
Sbjct: 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAE 64
Query: 698 YD---LFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEGF 733
YD F + + + FDD+FS F
Sbjct: 65 YDQLWQHRNDPQF-NRQFQHGDGQSFNAEDFDDIFSSIF 102
|
Length = 306 |
| >gnl|CDD|223733 COG0661, AarF, Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 8e-13
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 38 RSVITHLG-GIKRFIRSSYTVAVISFDYWWSLRDIDEDSEYYPSILASVHQRSANRILSM 96
R + L + R +R + +A++ W + SE + L +
Sbjct: 12 RIIRVRLRYLLGRLLRLTGRLALLLRLLSWLGKSKLASSE--------ELREKRAERLRL 63
Query: 97 CLT-NGGLYIKLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQ 155
L G +IKLGQ + + ++P +Y L LQD+ E +++ E+ G +
Sbjct: 64 ALEELGPTFIKLGQILSTRPDLVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEE 123
Query: 156 LFRSFDENPIAAASLAQ 172
LF F+ PIA+AS+AQ
Sbjct: 124 LFSEFEPEPIASASIAQ 140
|
Length = 517 |
| >gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ | Back alignment and domain information |
|---|
Score = 73.3 bits (179), Expect = 8e-13
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697
D YE LG+ R A QEI+K +++L ++HPD+N P A F ++ EA ++LS+ ++R
Sbjct: 3 DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRAN 62
Query: 698 YDLFGTTDGFSGQDSASRNFHNHMYNPF 725
YD +G DG +D +F ++N F
Sbjct: 63 YDKYG-HDGVDREDDF--DFQADVFNSF 87
|
This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871 |
| >gnl|CDD|217771 pfam03870, RNA_pol_Rpb8, RNA polymerase Rpb8 | Back alignment and domain information |
|---|
Score = 66.0 bits (161), Expect = 2e-12
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 562 VHADPHSGN-----DVNTWLYPVDLGDKFRLVLATTLREDGYPDSGEWNPLEESP 611
+ A+ S D+N+ LYP+ +GDKFRLV+A+TL EDG D G +NP +
Sbjct: 22 IEAESESFKMELILDINSQLYPLAVGDKFRLVIASTLLEDGTADDGSYNPAGDRF 76
|
Rpb8 is a subunit common to the three yeast RNA polymerases, pol I, II and III. Rpb8 interacts with the largest subunit Rpb1, and with Rpb3 and Rpb11, two smaller subunits. Length = 137 |
| >gnl|CDD|197821 smart00658, RPOL8c, RNA polymerase subunit 8 | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 1e-10
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 562 VHADPHSGN-----DVNTWLYPVDLGDKFRLVLATTLREDGYPDSGEWNPLEESP 611
+ A+ D+N+ +YP+ +GDKFRLV+A+TL EDG PDSGE NP+
Sbjct: 27 IFAESEYLQMELILDINSEIYPLAVGDKFRLVIASTLNEDGTPDSGENNPIALIK 81
|
subunit of RNA polymerase I, II and III. Length = 143 |
| >gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Score = 65.8 bits (160), Expect = 1e-10
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDK--NNDPTA----QEKFLQLTEAYNILSD 691
DPYE LG+ + S ++I+K Y+ L +++HPDK +EK+ +T+AY +L+D
Sbjct: 99 DPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTD 158
Query: 692 AERRKQYDLFGTTDG 706
+RR+ Y +GT D
Sbjct: 159 KKRRENYLNYGTPDS 173
|
Length = 610 |
| >gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Score = 63.9 bits (155), Expect = 2e-10
Identities = 35/102 (34%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 635 VSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNILSDAE 693
+ L YE L V + ++ + I+K+Y++L +++HPD+N D A+EKF + EAY +LSD +
Sbjct: 1 MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEK 60
Query: 694 RRKQYDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEGFNF 735
+R YD +G G + Q AS++ + + F + F F
Sbjct: 61 KRALYDRYG-KKGLN-QAGASQSDFSDFFEDLGSFFEDAFGF 100
|
Length = 369 |
| >gnl|CDD|233667 TIGR01982, UbiB, 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 3e-07
Identities = 23/72 (31%), Positives = 35/72 (48%)
Query: 101 GGLYIKLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSF 160
G +IK GQ + + +LP L LQD+ + ++ G +LF F
Sbjct: 61 GPTFIKFGQTLSTRADLLPADIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEF 120
Query: 161 DENPIAAASLAQ 172
+E P+AAAS+AQ
Sbjct: 121 EEKPLAAASIAQ 132
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol -> 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 437 |
| >gnl|CDD|225660 COG3118, COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 2e-06
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 858 TTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE 917
T NFE+ I S P L+ F++ WC C Q+ P +KL E V+ E
Sbjct: 28 VTEANFEQEVIQSSREVPVLVDFWAPWCGPCKQLTPTLEKLAAEYKG-KFKLAKVNCDAE 86
Query: 918 QGLARRLGVGSQLPQIALLTDGR 940
+A + GV S +P + DG+
Sbjct: 87 PMVAAQFGVQS-IPTVYAFKDGQ 108
|
Length = 304 |
| >gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional | Back alignment and domain information |
|---|
Score = 50.9 bits (121), Expect = 6e-06
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 640 YETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYD 699
Y+ LGV A ++EI + Y +L ++P K + KF ++ EAY IL D +++K Y+
Sbjct: 576 YDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYN 635
Query: 700 LFGTTDGFSG 709
FG DG G
Sbjct: 636 KFG-YDGIKG 644
|
Length = 1136 |
| >gnl|CDD|239259 cd02961, PDI_a_family, Protein Disulfide Isomerase (PDIa) family, redox active TRX domains; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 2e-05
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Query: 862 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP-LGVGFFTVHVHNEQGL 920
NF++ + S L+ FY+ WC C + P ++KL EL V V L
Sbjct: 7 NFDE-LVKDS--KDVLVEFYAPWCGHCKALAPEYEKLAKELKGDGKVVVAKVDCTANNDL 63
Query: 921 ARRLGVGSQLPQIALLTDGRTSFFK-EPSFSVQKMVEF 957
GV P I L +G K E +++ +VEF
Sbjct: 64 CSEYGV-RGYPTIKLFPNGSKEPVKYEGPRTLESLVEF 100
|
Members of this family include PDI and PDI-related proteins like ERp72, ERp57 (or ERp60), ERp44, P5, PDIR, ERp46 and the transmembrane PDIs. PDI, ERp57, ERp72, P5, PDIR and ERp46 are all oxidases, catalyzing the formation of disulfide bonds of newly synthesized polypeptides in the ER. They also exhibit reductase activity in acting as isomerases to correct any non-native disulfide bonds, as well as chaperone activity to prevent protein aggregation and facilitate the folding of newly synthesized proteins. These proteins usually contain multiple copies of a redox active TRX (a) domain containing a CXXC motif, and may also contain one or more redox inactive TRX-like (b) domains. Only one a domain is required for the oxidase function but multiple copies are necessary for the isomerase function. The different types of PDIs may show different substrate specificities and tissue-specific expression, or may be induced by stress. PDIs are in their reduced form at steady state and are oxidized to the active form by Ero1, which is localized in the ER through ERp44. Some members of this family also contain a DnaJ domain in addition to the redox active a domains; examples are ERdj5 and Pfj2. Also included in the family is the redox inactive N-terminal TRX-like domain of ERp29. Length = 101 |
| >gnl|CDD|239245 cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 3e-05
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 875 PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934
P ++ F++ WC C + P+ ++L +E V F V V LA GV +P
Sbjct: 12 PVVVDFWAPWCGPCKAIAPVLEELAEEYP--KVKFVKVDVDENPELAEEYGV-RSIPTFL 68
Query: 935 LLTDGR 940
+G+
Sbjct: 69 FFKNGK 74
|
Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins. Length = 93 |
| >gnl|CDD|239254 cd02956, ybbN, ybbN protein family; ybbN is a hypothetical protein containing a redox-inactive TRX-like domain | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 8e-05
Identities = 16/79 (20%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 862 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLA 921
NF+ + +S P ++ F++ ++ P+ ++L +E V+ + +A
Sbjct: 2 NFQ-QVLQESTQVPVVVDFWAPRSPPSKELLPLLERLAEE-YQGQFVLAKVNCDAQPQIA 59
Query: 922 RRLGVGSQLPQIALLTDGR 940
++ GV + LP + L G+
Sbjct: 60 QQFGVQA-LPTVYLFAAGQ 77
|
Its gene has been sequenced from several gammaproteobacteria and actinobacteria. Length = 96 |
| >gnl|CDD|111949 pfam03109, ABC1, ABC1 family | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 147 EDFGCTHSQLFRSFDENPIAAASLAQ 172
E+ G ++F FDE PIAAAS+AQ
Sbjct: 1 EELGAPVEEVFAEFDEEPIAAASIAQ 26
|
This family includes ABC1 from yeast and AarF from E. coli. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex and E. coli AarF is required for ubiquinone production. It has been suggested that members of the ABC1 family are novel chaperonins. These proteins are unrelated to the ABC transporter proteins. Length = 117 |
| >gnl|CDD|200072 TIGR01068, thioredoxin, thioredoxin | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 3e-04
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 875 PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934
P L+ F++ WC C + PI ++L E V F ++V +A + G+ S +P +
Sbjct: 16 PVLVDFWAPWCGPCKMIAPILEELAKEYEG-KVKFVKLNVDENPDIAAKYGIRS-IPTLL 73
Query: 935 LLTDG 939
L +G
Sbjct: 74 LFKNG 78
|
Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by This model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin [Energy metabolism, Electron transport]. Length = 101 |
| >gnl|CDD|239292 cd02994, PDI_a_TMX, PDIa family, TMX subfamily; composed of proteins similar to the TRX-related human transmembrane protein, TMX | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 3e-04
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 877 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALL 936
+I FY+ WC AC Q++P +++ D LG+ V V E GL+ R V + LP I
Sbjct: 20 MIEFYAPWCPACQQLQPEWEEFADWSDDLGINVAKVDVTQEPGLSGRFFVTA-LPTIYHA 78
Query: 937 TDG 939
DG
Sbjct: 79 KDG 81
|
TMX is a type I integral membrane protein; the N-terminal redox active TRX domain is present in the endoplasmic reticulum (ER) lumen while the C-terminus is oriented towards the cytoplasm. It is expressed in many cell types and its active site motif (CPAC) is unique. In vitro, TMX reduces interchain disulfides of insulin and renatures inactive RNase containing incorrect disulfide bonds. The C. elegans homolog, DPY-11, is expressed only in the hypodermis and resides in the cytoplasm. It is required for body and sensory organ morphogeneis. Another uncharacterized TRX-related transmembrane protein, human TMX4, is included in the alignment. The active site sequence of TMX4 is CPSC. Length = 101 |
| >gnl|CDD|224002 COG1076, DjlA, DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.001
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFL-----QLTEAYNILSD 691
D + LGV A I+K Y++L+ E HPDK + +F+ +L E D
Sbjct: 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYED 172
Query: 692 AE 693
+
Sbjct: 173 IK 174
|
Length = 174 |
| >gnl|CDD|236512 PRK09430, djlA, Dna-J like membrane chaperone protein; Provisional | Back alignment and domain information |
|---|
Score = 42.1 bits (100), Expect = 0.001
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDK 669
D Y+ LGV + QEI++ Y++L+ E HPDK
Sbjct: 201 DAYKVLGVSESDDDQEIKRAYRKLMSEHHPDK 232
|
Length = 267 |
| >gnl|CDD|215704 pfam00085, Thioredoxin, Thioredoxin | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.002
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 862 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLA 921
NF++ + KS P L+ FY+ WC C + P ++KL E V F V LA
Sbjct: 9 NFDE-EVAKS-DKPVLVDFYAPWCGPCKALAPEYEKLAQEYKD-DVKFAKVDADENPDLA 65
Query: 922 RRLGVGSQLPQIALLTDG 939
GV P I +G
Sbjct: 66 SEYGVRG-FPTIKFFKNG 82
|
Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond. Some members with only the active site are not separated from the noise. Length = 104 |
| >gnl|CDD|167217 PRK01356, hscB, co-chaperone HscB; Provisional | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.004
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 640 YETLGVPRTAS--LQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQ----LTEAYNILSDAE 693
++ LG+P+ + L+ + K Y + V++HPDK +E+ L L AY+ L DA
Sbjct: 5 FQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDAL 64
Query: 694 RRKQYDL 700
+R +Y L
Sbjct: 65 KRAEYML 71
|
Length = 166 |
| >gnl|CDD|185622 PTZ00443, PTZ00443, Thioredoxin domain-containing protein; Provisional | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.004
Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 10/148 (6%)
Query: 854 HKLSTTHWNFEK--NYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFT 911
+ NFEK + T P + FY+ WC C ++ P +++L L V
Sbjct: 31 ALVLLNDKNFEKLTQASTGATTGPWFVKFYAPWCSHCRKMAPAWERLAKALKGQ-VNVAD 89
Query: 912 VHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEF----FRLKLPYKLI 967
+ LA+R + P + L G+ ++ S +K+ F F+ L +
Sbjct: 90 LDATRALNLAKRFAIKG-YPTLLLFDKGKMYQYEGGDRSTEKLAAFALGDFKKALGAPVP 148
Query: 968 VPLS--ATNVDAFLDNWREDNKVHALLF 993
PLS A +D F+ E +++ F
Sbjct: 149 APLSFFALTIDFFVSGTNEALRIYDAAF 176
|
Length = 224 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1578 | |||
| KOG1235|consensus | 538 | 100.0 | ||
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 100.0 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 100.0 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 100.0 | |
| KOG1236|consensus | 565 | 100.0 | ||
| KOG4277|consensus | 468 | 100.0 | ||
| KOG0190|consensus | 493 | 100.0 | ||
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 100.0 | |
| KOG1235|consensus | 538 | 99.97 | ||
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.97 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.97 | |
| KOG1234|consensus | 363 | 99.95 | ||
| PF03109 | 119 | ABC1: ABC1 family; InterPro: IPR004147 This entry | 99.94 | |
| TIGR01130 | 462 | ER_PDI_fam protein disulfide isomerases, eukaryoti | 99.93 | |
| KOG0190|consensus | 493 | 99.92 | ||
| KOG1236|consensus | 565 | 99.91 | ||
| PTZ00102 | 477 | disulphide isomerase; Provisional | 99.9 | |
| KOG0191|consensus | 383 | 99.87 | ||
| KOG0713|consensus | 336 | 99.82 | ||
| COG0484 | 371 | DnaJ DnaJ-class molecular chaperone with C-termina | 99.82 | |
| KOG0912|consensus | 375 | 99.77 | ||
| PF01216 | 383 | Calsequestrin: Calsequestrin; InterPro: IPR001393 | 99.75 | |
| PTZ00102 | 477 | disulphide isomerase; Provisional | 99.73 | |
| KOG4277|consensus | 468 | 99.7 | ||
| cd03006 | 113 | PDI_a_EFP1_N PDIa family, N-terminal EFP1 subfamil | 99.7 | |
| TIGR01130 | 462 | ER_PDI_fam protein disulfide isomerases, eukaryoti | 99.68 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.65 | |
| cd03003 | 101 | PDI_a_ERdj5_N PDIa family, N-terminal ERdj5 subfam | 99.65 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.64 | |
| KOG0712|consensus | 337 | 99.62 | ||
| PF03109 | 119 | ABC1: ABC1 family; InterPro: IPR004147 This entry | 99.61 | |
| cd03007 | 116 | PDI_a_ERp29_N PDIa family, endoplasmic reticulum p | 99.61 | |
| PF00085 | 103 | Thioredoxin: Thioredoxin; InterPro: IPR013766 Thio | 99.61 | |
| PRK14296 | 372 | chaperone protein DnaJ; Provisional | 99.6 | |
| cd03004 | 104 | PDI_a_ERdj5_C PDIa family, C-terminal ERdj5 subfam | 99.6 | |
| cd02996 | 108 | PDI_a_ERp44 PDIa family, endoplasmic reticulum pro | 99.59 | |
| PRK14288 | 369 | chaperone protein DnaJ; Provisional | 99.59 | |
| cd02963 | 111 | TRX_DnaJ TRX domain, DnaJ domain containing protei | 99.59 | |
| TIGR02187 | 215 | GlrX_arch Glutaredoxin-like domain protein. This f | 99.58 | |
| cd03065 | 120 | PDI_b_Calsequestrin_N PDIb family, Calsequestrin s | 99.58 | |
| KOG0910|consensus | 150 | 99.58 | ||
| cd02994 | 101 | PDI_a_TMX PDIa family, TMX subfamily; composed of | 99.57 | |
| COG3118 | 304 | Thioredoxin domain-containing protein [Posttransla | 99.56 | |
| PRK14287 | 371 | chaperone protein DnaJ; Provisional | 99.55 | |
| PRK14298 | 377 | chaperone protein DnaJ; Provisional | 99.55 | |
| PRK14276 | 380 | chaperone protein DnaJ; Provisional | 99.55 | |
| PRK14299 | 291 | chaperone protein DnaJ; Provisional | 99.55 | |
| KOG0717|consensus | 508 | 99.55 | ||
| PRK14286 | 372 | chaperone protein DnaJ; Provisional | 99.55 | |
| KOG0191|consensus | 383 | 99.54 | ||
| PTZ00443 | 224 | Thioredoxin domain-containing protein; Provisional | 99.52 | |
| cd03002 | 109 | PDI_a_MPD1_like PDI family, MPD1-like subfamily; c | 99.52 | |
| PRK14278 | 378 | chaperone protein DnaJ; Provisional | 99.52 | |
| PRK14285 | 365 | chaperone protein DnaJ; Provisional | 99.51 | |
| PRK14301 | 373 | chaperone protein DnaJ; Provisional | 99.51 | |
| PRK14294 | 366 | chaperone protein DnaJ; Provisional | 99.51 | |
| PRK14280 | 376 | chaperone protein DnaJ; Provisional | 99.51 | |
| PRK14297 | 380 | chaperone protein DnaJ; Provisional | 99.5 | |
| cd02993 | 109 | PDI_a_APS_reductase PDIa family, 5'-Adenylylsulfat | 99.49 | |
| PRK14282 | 369 | chaperone protein DnaJ; Provisional | 99.49 | |
| PRK14291 | 382 | chaperone protein DnaJ; Provisional | 99.49 | |
| cd03005 | 102 | PDI_a_ERp46 PDIa family, endoplasmic reticulum pro | 99.48 | |
| PRK14279 | 392 | chaperone protein DnaJ; Provisional | 99.48 | |
| KOG1234|consensus | 363 | 99.48 | ||
| cd03001 | 103 | PDI_a_P5 PDIa family, P5 subfamily; composed of eu | 99.48 | |
| PRK14277 | 386 | chaperone protein DnaJ; Provisional | 99.48 | |
| cd02956 | 96 | ybbN ybbN protein family; ybbN is a hypothetical p | 99.47 | |
| TIGR02349 | 354 | DnaJ_bact chaperone protein DnaJ. This model repre | 99.46 | |
| PRK10767 | 371 | chaperone protein DnaJ; Provisional | 99.45 | |
| PTZ00037 | 421 | DnaJ_C chaperone protein; Provisional | 99.45 | |
| PRK14283 | 378 | chaperone protein DnaJ; Provisional | 99.45 | |
| PRK09381 | 109 | trxA thioredoxin; Provisional | 99.44 | |
| PRK14284 | 391 | chaperone protein DnaJ; Provisional | 99.44 | |
| cd02999 | 100 | PDI_a_ERp44_like PDIa family, endoplasmic reticulu | 99.44 | |
| KOG1163|consensus | 341 | 99.44 | ||
| cd02995 | 104 | PDI_a_PDI_a'_C PDIa family, C-terminal TRX domain | 99.44 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.43 | |
| PHA02278 | 103 | thioredoxin-like protein | 99.43 | |
| TIGR01126 | 102 | pdi_dom protein disulfide-isomerase domain. This m | 99.43 | |
| KOG0719|consensus | 264 | 99.41 | ||
| PRK10266 | 306 | curved DNA-binding protein CbpA; Provisional | 99.41 | |
| cd02997 | 104 | PDI_a_PDIR PDIa family, PDIR subfamily; composed o | 99.41 | |
| PRK14300 | 372 | chaperone protein DnaJ; Provisional | 99.4 | |
| PRK14295 | 389 | chaperone protein DnaJ; Provisional | 99.4 | |
| PRK14292 | 371 | chaperone protein DnaJ; Provisional | 99.39 | |
| TIGR02187 | 215 | GlrX_arch Glutaredoxin-like domain protein. This f | 99.39 | |
| PRK14281 | 397 | chaperone protein DnaJ; Provisional | 99.39 | |
| PRK14290 | 365 | chaperone protein DnaJ; Provisional | 99.39 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.38 | |
| cd02948 | 102 | TRX_NDPK TRX domain, TRX and NDP-kinase (NDPK) fus | 99.38 | |
| PRK14293 | 374 | chaperone protein DnaJ; Provisional | 99.38 | |
| KOG0716|consensus | 279 | 99.37 | ||
| PLN02309 | 457 | 5'-adenylylsulfate reductase | 99.37 | |
| cd02998 | 105 | PDI_a_ERp38 PDIa family, endoplasmic reticulum pro | 99.37 | |
| KOG0721|consensus | 230 | 99.36 | ||
| cd03000 | 104 | PDI_a_TMX3 PDIa family, TMX3 subfamily; composed o | 99.36 | |
| KOG0624|consensus | 504 | 99.36 | ||
| PRK10996 | 139 | thioredoxin 2; Provisional | 99.36 | |
| cd02954 | 114 | DIM1 Dim1 family; Dim1 is also referred to as U5 s | 99.36 | |
| TIGR00424 | 463 | APS_reduc 5'-adenylylsulfate reductase, thioredoxi | 99.36 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.35 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.35 | |
| PF00226 | 64 | DnaJ: DnaJ domain; InterPro: IPR001623 The prokary | 99.35 | |
| TIGR01068 | 101 | thioredoxin thioredoxin. Several proteins, such as | 99.34 | |
| KOG0595|consensus | 429 | 99.34 | ||
| PTZ00341 | 1136 | Ring-infected erythrocyte surface antigen; Provisi | 99.33 | |
| KOG0715|consensus | 288 | 99.32 | ||
| cd02961 | 101 | PDI_a_family Protein Disulfide Isomerase (PDIa) fa | 99.32 | |
| cd02965 | 111 | HyaE HyaE family; HyaE is also called HupG and Hox | 99.32 | |
| PRK14289 | 386 | chaperone protein DnaJ; Provisional | 99.32 | |
| cd02985 | 103 | TRX_CDSP32 TRX family, chloroplastic drought-induc | 99.31 | |
| KOG0574|consensus | 502 | 99.31 | ||
| KOG0691|consensus | 296 | 99.3 | ||
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.3 | |
| cd02957 | 113 | Phd_like Phosducin (Phd)-like family; composed of | 99.29 | |
| cd02962 | 152 | TMX2 TMX2 family; composed of proteins similar to | 99.29 | |
| KOG1731|consensus | 606 | 99.28 | ||
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.27 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.25 | |
| KOG0718|consensus | 546 | 99.25 | ||
| cd02992 | 114 | PDI_a_QSOX PDIa family, Quiescin-sulfhydryl oxidas | 99.24 | |
| cd02984 | 97 | TRX_PICOT TRX domain, PICOT (for PKC-interacting c | 99.21 | |
| KOG0907|consensus | 106 | 99.2 | ||
| PLN00410 | 142 | U5 snRNP protein, DIM1 family; Provisional | 99.2 | |
| cd02953 | 104 | DsbDgamma DsbD gamma family; DsbD gamma is the C-t | 99.19 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 99.19 | |
| KOG0661|consensus | 538 | 99.18 | ||
| cd02989 | 113 | Phd_like_TxnDC9 Phosducin (Phd)-like family, Thior | 99.18 | |
| PF13848 | 184 | Thioredoxin_6: Thioredoxin-like domain; PDB: 3EC3_ | 99.18 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.17 | |
| smart00271 | 60 | DnaJ DnaJ molecular chaperone homology domain. | 99.15 | |
| cd06257 | 55 | DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho | 99.14 | |
| KOG1731|consensus | 606 | 99.14 | ||
| cd02949 | 97 | TRX_NTR TRX domain, novel NADPH thioredoxin reduct | 99.14 | |
| KOG4236|consensus | 888 | 99.13 | ||
| cd02950 | 142 | TxlA TRX-like protein A (TxlA) family; TxlA was or | 99.13 | |
| KOG0912|consensus | 375 | 99.12 | ||
| cd02987 | 175 | Phd_like_Phd Phosducin (Phd)-like family, Phd subf | 99.12 | |
| KOG4250|consensus | 732 | 99.11 | ||
| cd02983 | 130 | P5_C P5 family, C-terminal redox inactive TRX-like | 99.11 | |
| TIGR03835 | 871 | termin_org_DnaJ terminal organelle assembly protei | 99.11 | |
| PTZ00051 | 98 | thioredoxin; Provisional | 99.1 | |
| PHA03102 | 153 | Small T antigen; Reviewed | 99.1 | |
| KOG0581|consensus | 364 | 99.1 | ||
| KOG0605|consensus | 550 | 99.09 | ||
| cd02986 | 114 | DLP Dim1 family, Dim1-like protein (DLP) subfamily | 99.09 | |
| cd02947 | 93 | TRX_family TRX family; composed of two groups: Gro | 99.08 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.07 | |
| KOG0615|consensus | 475 | 99.06 | ||
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.05 | |
| cd03006 | 113 | PDI_a_EFP1_N PDIa family, N-terminal EFP1 subfamil | 99.05 | |
| KOG0722|consensus | 329 | 99.05 | ||
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 99.04 | |
| cd02982 | 103 | PDI_b'_family Protein Disulfide Isomerase (PDIb') | 99.04 | |
| KOG0667|consensus | 586 | 99.03 | ||
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.03 | |
| KOG0908|consensus | 288 | 98.99 | ||
| KOG0192|consensus | 362 | 98.98 | ||
| KOG0583|consensus | 370 | 98.98 | ||
| cd02988 | 192 | Phd_like_VIAF Phosducin (Phd)-like family, Viral i | 98.97 | |
| cd02975 | 113 | PfPDO_like_N Pyrococcus furiosus protein disulfide | 98.97 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 98.97 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 98.96 | |
| KOG0593|consensus | 396 | 98.94 | ||
| COG2214 | 237 | CbpA DnaJ-class molecular chaperone [Posttranslati | 98.94 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 98.93 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 98.93 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 98.93 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 98.93 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 98.92 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 98.92 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 98.92 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 98.91 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 98.91 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 98.91 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 98.9 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 98.9 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 98.9 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 98.9 | |
| KOG0577|consensus | 948 | 98.9 | ||
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 98.9 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.89 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 98.89 | |
| TIGR01295 | 122 | PedC_BrcD bacteriocin transport accessory protein, | 98.89 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 98.89 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 98.88 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 98.88 | |
| KOG0594|consensus | 323 | 98.88 | ||
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 98.88 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 98.88 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 98.88 | |
| TIGR00411 | 82 | redox_disulf_1 small redox-active disulfide protei | 98.88 | |
| KOG1165|consensus | 449 | 98.87 | ||
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 98.87 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 98.87 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 98.87 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 98.87 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 98.87 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 98.87 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 98.86 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 98.86 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 98.86 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 98.86 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 98.86 | |
| KOG0550|consensus | 486 | 98.85 | ||
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 98.85 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 98.85 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 98.85 | |
| cd03003 | 101 | PDI_a_ERdj5_N PDIa family, N-terminal ERdj5 subfam | 98.85 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 98.85 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 98.85 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 98.85 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 98.85 | |
| KOG0720|consensus | 490 | 98.85 | ||
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 98.85 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 98.85 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 98.84 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 98.84 | |
| PTZ00062 | 204 | glutaredoxin; Provisional | 98.83 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 98.82 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 98.82 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 98.82 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 98.82 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 98.82 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 98.81 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 98.81 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 98.81 | |
| cd02963 | 111 | TRX_DnaJ TRX domain, DnaJ domain containing protei | 98.81 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 98.81 | |
| KOG0663|consensus | 419 | 98.8 | ||
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 98.8 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 98.8 | |
| KOG0658|consensus | 364 | 98.8 | ||
| PRK01356 | 166 | hscB co-chaperone HscB; Provisional | 98.8 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 98.79 | |
| cd02951 | 125 | SoxW SoxW family; SoxW is a bacterial periplasmic | 98.79 | |
| PRK05014 | 171 | hscB co-chaperone HscB; Provisional | 98.79 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 98.79 | |
| KOG0575|consensus | 592 | 98.79 | ||
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 98.79 | |
| KOG0582|consensus | 516 | 98.78 | ||
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 98.78 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 98.77 | |
| KOG0032|consensus | 382 | 98.77 | ||
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 98.77 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 98.77 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 98.77 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 98.77 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 98.77 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 98.77 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 98.76 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 98.76 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 98.76 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 98.75 | |
| KOG1166|consensus | 974 | 98.75 | ||
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 98.75 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 98.75 | |
| cd02952 | 119 | TRP14_like Human TRX-related protein 14 (TRP14)-li | 98.75 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 98.75 | |
| COG5407 | 610 | SEC63 Preprotein translocase subunit Sec63 [Intrac | 98.75 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 98.75 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 98.75 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 98.74 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 98.74 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 98.74 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 98.73 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 98.73 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 98.73 | |
| KOG1164|consensus | 322 | 98.73 | ||
| PRK00294 | 173 | hscB co-chaperone HscB; Provisional | 98.73 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 98.73 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 98.73 | |
| KOG0600|consensus | 560 | 98.72 | ||
| PRK10345 | 210 | hypothetical protein; Provisional | 98.72 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 98.72 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 98.72 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 98.72 | |
| KOG0198|consensus | 313 | 98.72 | ||
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 98.72 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 98.72 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 98.71 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 98.71 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 98.71 | |
| KOG0578|consensus | 550 | 98.71 | ||
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 98.7 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 98.7 | |
| PRK03578 | 176 | hscB co-chaperone HscB; Provisional | 98.7 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 98.7 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 98.7 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 98.69 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 98.69 | |
| cd02993 | 109 | PDI_a_APS_reductase PDIa family, 5'-Adenylylsulfat | 98.69 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 98.69 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 98.69 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 98.69 | |
| KOG0660|consensus | 359 | 98.69 | ||
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 98.69 | |
| KOG0587|consensus | 953 | 98.69 | ||
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 98.69 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 98.69 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 98.68 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 98.68 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 98.68 | |
| cd03004 | 104 | PDI_a_ERdj5_C PDIa family, C-terminal ERdj5 subfam | 98.68 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 98.68 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 98.68 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 98.68 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 98.68 | |
| KOG1187|consensus | 361 | 98.68 | ||
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 98.67 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 98.67 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 98.67 | |
| KOG0659|consensus | 318 | 98.67 | ||
| cd03007 | 116 | PDI_a_ERp29_N PDIa family, endoplasmic reticulum p | 98.67 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 98.67 | |
| KOG0610|consensus | 459 | 98.67 | ||
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 98.67 | |
| KOG0714|consensus | 306 | 98.66 | ||
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 98.66 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 98.66 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 98.66 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 98.66 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 98.66 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 98.66 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 98.66 | |
| PTZ00284 | 467 | protein kinase; Provisional | 98.66 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 98.66 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 98.66 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 98.66 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 98.66 | |
| KOG0608|consensus | 1034 | 98.66 | ||
| KOG0585|consensus | 576 | 98.65 | ||
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 98.65 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 98.65 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 98.65 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 98.64 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 98.64 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 98.64 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 98.64 | |
| KOG0611|consensus | 668 | 98.64 | ||
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 98.64 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 98.64 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 98.64 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 98.63 | |
| cd02999 | 100 | PDI_a_ERp44_like PDIa family, endoplasmic reticulu | 98.63 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 98.63 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 98.63 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 98.63 | |
| PTZ00100 | 116 | DnaJ chaperone protein; Provisional | 98.63 | |
| KOG0592|consensus | 604 | 98.62 | ||
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 98.62 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 98.62 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 98.62 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 98.62 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 98.62 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 98.61 | |
| cd02996 | 108 | PDI_a_ERp44 PDIa family, endoplasmic reticulum pro | 98.61 | |
| cd02994 | 101 | PDI_a_TMX PDIa family, TMX subfamily; composed of | 98.61 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 98.61 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 98.61 | |
| KOG4721|consensus | 904 | 98.61 | ||
| KOG0616|consensus | 355 | 98.6 | ||
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 98.6 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 98.6 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 98.6 | |
| KOG1095|consensus | 1025 | 98.6 | ||
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 98.6 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 98.6 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 98.6 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 98.6 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 98.59 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 98.59 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 98.59 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 98.59 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 98.59 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 98.59 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 98.59 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 98.59 | |
| KOG0201|consensus | 467 | 98.59 | ||
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 98.59 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 98.59 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 98.59 | |
| KOG0597|consensus | 808 | 98.58 | ||
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 98.58 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 98.58 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 98.58 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 98.58 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 98.58 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 98.58 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 98.58 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 98.57 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 98.57 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 98.57 | |
| KOG0588|consensus | 786 | 98.57 | ||
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 98.57 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 98.57 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 98.57 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 98.57 | |
| cd03002 | 109 | PDI_a_MPD1_like PDI family, MPD1-like subfamily; c | 98.57 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 98.57 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 98.57 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 98.57 | |
| PTZ00443 | 224 | Thioredoxin domain-containing protein; Provisional | 98.56 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 98.56 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 98.56 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 98.56 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 98.56 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 98.56 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 98.56 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 98.56 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 98.55 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 98.55 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 98.55 | |
| cd02992 | 114 | PDI_a_QSOX PDIa family, Quiescin-sulfhydryl oxidas | 98.55 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 98.55 | |
| PHA02125 | 75 | thioredoxin-like protein | 98.55 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 98.55 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 98.55 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 98.55 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 98.55 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 98.54 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 98.54 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 98.54 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 98.54 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 98.54 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 98.53 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 98.53 | |
| KOG1989|consensus | 738 | 98.53 | ||
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 98.53 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 98.53 | |
| KOG0910|consensus | 150 | 98.53 | ||
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 98.53 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 98.52 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 98.52 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 98.52 | |
| PRK09430 | 267 | djlA Dna-J like membrane chaperone protein; Provis | 98.52 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 98.52 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 98.52 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 98.52 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 98.52 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 98.52 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 98.52 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 98.52 | |
| PF00085 | 103 | Thioredoxin: Thioredoxin; InterPro: IPR013766 Thio | 98.52 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 98.52 | |
| PHA02624 | 647 | large T antigen; Provisional | 98.51 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 98.51 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 98.51 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 98.51 | |
| KOG0193|consensus | 678 | 98.51 | ||
| cd02995 | 104 | PDI_a_PDI_a'_C PDIa family, C-terminal TRX domain | 98.51 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 98.51 | |
| PF13848 | 184 | Thioredoxin_6: Thioredoxin-like domain; PDB: 3EC3_ | 98.51 | |
| TIGR00412 | 76 | redox_disulf_2 small redox-active disulfide protei | 98.5 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 98.5 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 98.5 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 98.5 | |
| KOG0612|consensus | 1317 | 98.5 | ||
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 98.5 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 98.5 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 98.49 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 98.49 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 98.49 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 98.49 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 98.49 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 98.49 | |
| KOG0580|consensus | 281 | 98.49 | ||
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 98.49 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 98.49 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 98.48 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 98.48 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 98.48 | |
| KOG0197|consensus | 468 | 98.48 | ||
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 98.48 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 98.48 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 98.47 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 98.47 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 98.47 | |
| PRK00293 | 571 | dipZ thiol:disulfide interchange protein precursor | 98.47 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 98.46 | |
| TIGR00424 | 463 | APS_reduc 5'-adenylylsulfate reductase, thioredoxi | 98.46 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 98.46 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 98.46 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 98.46 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 98.46 | |
| PHA02278 | 103 | thioredoxin-like protein | 98.45 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 98.45 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 98.45 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 98.45 | |
| KOG0913|consensus | 248 | 98.45 | ||
| KOG2270|consensus | 520 | 98.45 | ||
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 98.44 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 98.44 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 98.44 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 98.44 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 98.44 | |
| cd02957 | 113 | Phd_like Phosducin (Phd)-like family; composed of | 98.44 | |
| KOG0598|consensus | 357 | 98.44 | ||
| cd02954 | 114 | DIM1 Dim1 family; Dim1 is also referred to as U5 s | 98.43 | |
| cd03005 | 102 | PDI_a_ERp46 PDIa family, endoplasmic reticulum pro | 98.43 |
| >KOG1235|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-65 Score=625.50 Aligned_cols=293 Identities=40% Similarity=0.644 Sum_probs=271.3
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHhcCcchhhHHHHHhcCCCCCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhcCc
Q psy12972 274 EDSEYYPSILASVHQRSANRILSMCLTNGGLYIKLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCT 353 (1578)
Q Consensus 274 ~~~~~~~~~~~~~h~r~a~~l~~~~~~~Gg~yiKlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~~~~~~~~~~g~~ 353 (1578)
...+........+|.+.|++|+++|+.|||+|||+||++|||+|++|+||+++|+.|||+|||.||+++
T Consensus 77 ~~~e~~~~~~~~~~~~~a~~L~e~~~~nGg~yIKlGQ~lst~~dllP~Eyv~~L~~LqD~~Pp~~~ee~----------- 145 (538)
T KOG1235|consen 77 ASSESRLSKLSKVLLSAAERLLELFLRNGGTYIKLGQHLSTRPDLLPKEYVKTLSELQDQAPPFPWEEA----------- 145 (538)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHcCCeEEEechhhccccccCcHHHHHHHHHHhccCCCCCHHHH-----------
Confidence 345666678888999999999999999999999999999999999999999999999999999888654
Q ss_pred ccccccccCCCchhHHHHHHHHHhhhhhhhhhhHHHHHHHHhCCChhhhccccCCcccccccceEEEEEEecCCCEEEEE
Q psy12972 354 HSQLFRSFDENPIAAASLAQALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVK 433 (1578)
Q Consensus 354 ~~~~~~~f~~~p~~~~~~~~~l~~~~~~~~~~~v~~~~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~~G~~VAVK 433 (1578)
.++|++|||.+++++|++||++||||||+||||+|++++|+.||||
T Consensus 146 ----------------------------------~~i~e~ElG~~ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVK 191 (538)
T KOG1235|consen 146 ----------------------------------FKIFEEELGAPIEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVK 191 (538)
T ss_pred ----------------------------------HHHHHHHhCCCHHHHHHhcCcchhhhcchhheEEEEecCCCEEEEE
Confidence 4578899999999999999999999999999999999999999999
Q ss_pred EecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCC---CeeecEEee
Q psy12972 434 VQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLP---YVYIPRILW 510 (1578)
Q Consensus 434 Vq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~---~v~vP~v~~ 510 (1578)
|||||+++.+..|+.+++.+++++.+++|.+++.|+++|+++++.+||||.+||+|+++++++|++.+ .|+||+|||
T Consensus 192 VQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~ 271 (538)
T KOG1235|consen 192 VQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYW 271 (538)
T ss_pred ecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehh
Confidence 99999999999999999999999999999999999999999999999999999999999999999988 799999999
Q ss_pred CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCCCCCCCCeeEEecCCchhhhhhh
Q psy12972 511 DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHSGNDVNTWLYPVDLGDKFRLVLA 590 (1578)
Q Consensus 511 ~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHPGNilv~~v~liDfG~~~~l~l~ 590 (1578)
++||+|||||||++|++++|+..+.+.|+++.+++..+.+++++|||.+||||||||||||+++... -...+++++
T Consensus 272 ~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qIf~~GffHaDPHPGNilv~~~~----~~~~~ivll 347 (538)
T KOG1235|consen 272 DLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQIFKTGFFHADPHPGNILVRPNP----EGDEEIVLL 347 (538)
T ss_pred hcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHHHhcCCccCCCCCCcEEEecCC----CCCccEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999976322 234466666
Q ss_pred hhcccCCCCCCCCCCccccCcccchhhhHHHHHHhh
Q psy12972 591 TTLREDGYPDSGEWNPLEESPRMNFNLIMLWYTFLL 626 (1578)
Q Consensus 591 ~~~~~~g~~D~G~~~~l~~~~r~~~~l~~lw~~~~l 626 (1578)
|||+|+.|+...|.+ ++.+|++++.
T Consensus 348 ---------DhGl~~~is~~~r~~--~~~~~~a~~~ 372 (538)
T KOG1235|consen 348 ---------DHGLYAVISHKTRKD--YAELWLALVF 372 (538)
T ss_pred ---------cccccccccHHHHHH--HHHHHHHHhc
Confidence 999999987665555 4789999875
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-63 Score=609.22 Aligned_cols=316 Identities=34% Similarity=0.490 Sum_probs=277.2
Q ss_pred HHHHHHHHHHHHHHHHhcCcchhhHHHHHhcCCCCCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhcCcccccccccCC
Q psy12972 284 ASVHQRSANRILSMCLTNGGLYIKLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDE 363 (1578)
Q Consensus 284 ~~~h~r~a~~l~~~~~~~Gg~yiKlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~~~~~~~~~~g~~~~~~~~~f~~ 363 (1578)
....++.|+|++.++++|||+|||+||+||||+|++|++|+++|++|||+|||.|++++
T Consensus 51 ~~~~~~~~~rL~~~L~~LGPtfIK~GQ~LStR~Dl~p~e~~~eL~~LQD~vpp~~~~~~--------------------- 109 (517)
T COG0661 51 EELREKRAERLRLALEELGPTFIKLGQILSTRPDLVPPEYAEELAKLQDRVPPFPFEEA--------------------- 109 (517)
T ss_pred HHHhHhHHHHHHHHHHHhCCchhhhhhHHhcCccccCHHHHHHHHHhhcCCCCCCHHHH---------------------
Confidence 34556789999999999999999999999999999999999999999999999887654
Q ss_pred CchhHHHHHHHHHhhhhhhhhhhHHHHHHHHhCCChhhhccccCCcccccccceEEEEEEecCCCEEEEEEecchhhhhH
Q psy12972 364 NPIAAASLAQALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERF 443 (1578)
Q Consensus 364 ~p~~~~~~~~~l~~~~~~~~~~~v~~~~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~ 443 (1578)
+++|+++||.+++++|++||++|||||||||||+|++++|++|||||||||+++.+
T Consensus 110 ------------------------~~iie~eLG~~iee~F~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i 165 (517)
T COG0661 110 ------------------------ERIIEEELGRPIEELFSEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERI 165 (517)
T ss_pred ------------------------HHHHHHHhCCCHHHHHHHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHH
Confidence 45678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhCCC---CCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEE
Q psy12972 444 VGDIATVQTLLRIAGFLYPK---FDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTT 520 (1578)
Q Consensus 444 ~~Dl~~l~~l~~~~~~~~~~---~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVM 520 (1578)
..|+.+|+.+++++.+++|. +++.++++|+.+.+..|+||++||+|+++|+++|++.+.|+||+|||++||++||||
T Consensus 166 ~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtm 245 (517)
T COG0661 166 EADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTM 245 (517)
T ss_pred HHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEE
Confidence 99999999999999999887 899999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCCCCCCCCeeEEecCCchhhhhhhhhcccCCCCC
Q psy12972 521 EFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHSGNDVNTWLYPVDLGDKFRLVLATTLREDGYPD 600 (1578)
Q Consensus 521 E~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHPGNilv~~v~liDfG~~~~l~l~~~~~~~g~~D 600 (1578)
||++|++++|...+..+|.|.+.++..++++|++|++.+||||||||||||++.. | ++++++ |
T Consensus 246 E~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~dgffHaDpHpGNi~v~~----~----g~i~~l---------D 308 (517)
T COG0661 246 EWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLRDGFFHADPHPGNILVRS----D----GRIVLL---------D 308 (517)
T ss_pred EeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccCCCccceEEec----C----CcEEEE---------c
Confidence 9999999999999999999999999999999999999999999999999999651 1 345444 9
Q ss_pred CCCCCccccCcccchhhhHHHHHHhhhhhhhhccccCCCcccccc-cccCCHHHHHHHhhhhhhhcCC
Q psy12972 601 SGEWNPLEESPRMNFNLIMLWYTFLLNVLFINCAVSLDPYETLGV-PRTASLQEIRKNYKRLVVEWHP 667 (1578)
Q Consensus 601 ~G~~~~l~~~~r~~~~l~~lw~~~~l~~~~~~~~~~~d~y~iLgv-~~~as~~eIk~ayr~l~~~~HP 667 (1578)
||++++|++..|..+ ..+|++++....- .-...+.-+|. ++..+.+.+.++.+.....++-
T Consensus 309 fGi~g~l~~~~r~~l--~~~~~a~~~rD~~----~v~~~~~~~G~~~~~~~~~~~~~~i~~~~~~~~~ 370 (517)
T COG0661 309 FGIVGRLDPKFRRYL--AELLLAFLNRDYD----RVAELHVELGYVPPDTDRDPLAAAIRAVLEPIYG 370 (517)
T ss_pred CcceecCCHHHHHHH--HHHHHHHHhhCHH----HHHHHHHHhCCCCCccchHHHHHHHHHHHHhhhC
Confidence 999999877766554 5666565422110 01111222453 6678888899999888776643
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-55 Score=543.55 Aligned_cols=308 Identities=25% Similarity=0.375 Sum_probs=266.7
Q ss_pred HHHHHHHHHHHhcCcchhhHHHHHhcCCCCCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhcCcccccccccCCCchhH
Q psy12972 289 RSANRILSMCLTNGGLYIKLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAA 368 (1578)
Q Consensus 289 r~a~~l~~~~~~~Gg~yiKlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~~~~~~~~~~g~~~~~~~~~f~~~p~~~ 368 (1578)
..|+|++.+++++||+|||+||+||||+|++|++|+++|++|||+|||.|++++
T Consensus 50 ~~~~rlr~aLe~LGp~fIKlGQ~LStR~DllP~~~~~eL~~Lqd~vpp~~~~~~-------------------------- 103 (537)
T PRK04750 50 PRGERLRLALEELGPIFVKFGQMLSTRRDLFPPDIADELALLQDRVPPFDGALA-------------------------- 103 (537)
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHcCcccCCHHHHHHHHHHHcCCCCCCHHHH--------------------------
Confidence 468999999999999999999999999999999999999999999999887654
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHHHhCCChhhhccccCCcccccccceEEEEEEecC-CCEEEEEEecchhhhhHHHHH
Q psy12972 369 ASLAQALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKE-GVEVAVKVQYIDLRERFVGDI 447 (1578)
Q Consensus 369 ~~~~~~l~~~~~~~~~~~v~~~~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~~-G~~VAVKVq~P~i~~~~~~Dl 447 (1578)
+++++++||.+++++|++||++|+|||||||||+|++++ |++||||||||++.+.+..|+
T Consensus 104 -------------------~~~ie~elG~~~~~~F~~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl 164 (537)
T PRK04750 104 -------------------RAIIEKALGGPVEEWFDDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADL 164 (537)
T ss_pred -------------------HHHHHHHhCCCHHHHHHhcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHH
Confidence 456788899999999999999999999999999999997 999999999999999999999
Q ss_pred HHHHHHHHHHhhhCCC---CCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccC
Q psy12972 448 ATVQTLLRIAGFLYPK---FDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFID 524 (1578)
Q Consensus 448 ~~l~~l~~~~~~~~~~---~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~ 524 (1578)
.+|+.++++++++.|. ++..++++|+.+.+.+|+||.+||+|+.+++++|++.+.|+||+|||+|||++||||||++
T Consensus 165 ~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~ 244 (537)
T PRK04750 165 ALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMY 244 (537)
T ss_pred HHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeec
Confidence 9999999999987664 6789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCCCCCCCCeeEEecCCchhhhhhhhhcccCCCCCCCCC
Q psy12972 525 GVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHSGNDVNTWLYPVDLGDKFRLVLATTLREDGYPDSGEW 604 (1578)
Q Consensus 525 G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHPGNilv~~v~liDfG~~~~l~l~~~~~~~g~~D~G~~ 604 (1578)
|.+++++..+.+.|.+++.+++.+++.++.|+|.+||||||||||||+++ .|-+..++++++ |+|++
T Consensus 245 G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~GffHaDpHPGNIlv~----~~g~~~~~i~ll---------DFGiv 311 (537)
T PRK04750 245 GIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMHPGNIFVS----YDPPENPRYIAL---------DFGIV 311 (537)
T ss_pred CccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCeeeCCCChHHeEEe----cCCCCCCeEEEE---------ecceE
Confidence 99999987778889999999999999999999999999999999999964 121122344444 99999
Q ss_pred CccccCcccchhhhHHHHHHhhhhhhhhccccCCCccc------ccc-cccCCHHHHHHHhhhhhhhcC
Q psy12972 605 NPLEESPRMNFNLIMLWYTFLLNVLFINCAVSLDPYET------LGV-PRTASLQEIRKNYKRLVVEWH 666 (1578)
Q Consensus 605 ~~l~~~~r~~~~l~~lw~~~~l~~~~~~~~~~~d~y~i------Lgv-~~~as~~eIk~ayr~l~~~~H 666 (1578)
+.|++.+|..+ ..++.+++ ..|+.++ +|. +++.+.++++++-+.+...+.
T Consensus 312 g~l~~~~r~~l--~~~~~a~~----------~~D~~~v~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~ 368 (537)
T PRK04750 312 GSLNKEDKRYL--AENFLAFF----------NRDYRRVAELHVESGWVPPDTRVEELEFAIRAVCEPIF 368 (537)
T ss_pred EECCHHHHHHH--HHHHHHHH----------hcCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 99877666543 33444433 3344433 453 557788888888777766554
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-52 Score=509.27 Aligned_cols=310 Identities=30% Similarity=0.427 Sum_probs=261.1
Q ss_pred HHHHHHHHHHHhcCcchhhHHHHHhcCCCCCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhcCcccccccccCCCchhH
Q psy12972 289 RSANRILSMCLTNGGLYIKLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAA 368 (1578)
Q Consensus 289 r~a~~l~~~~~~~Gg~yiKlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~~~~~~~~~~g~~~~~~~~~f~~~p~~~ 368 (1578)
..|++++++++++||+|||+||++|||+|+||++|+++|++|||++||+||++++
T Consensus 48 ~~~~~l~~~l~~lGp~fiKlGQ~lS~r~dllp~~~~~~L~~Lqd~v~p~~~~~~~------------------------- 102 (437)
T TIGR01982 48 SRGERLRLALEELGPTFIKFGQTLSTRADLLPADIAEELSLLQDRVPPFDFKVAR------------------------- 102 (437)
T ss_pred cHHHHHHHHHHHcCchhHHHhHHHHhCcccCCHHHHHHHHHHhcCCCCCCHHHHH-------------------------
Confidence 4589999999999999999999999999999999999999999999998887554
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHHHhCCChhhhccccCCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHH
Q psy12972 369 ASLAQALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIA 448 (1578)
Q Consensus 369 ~~~~~~l~~~~~~~~~~~v~~~~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~ 448 (1578)
++++++||.+++++|++||++|||||||||||+|++++|++||||||||++.+.+..|+.
T Consensus 103 --------------------~~l~~elg~~~~~~F~~fd~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~ 162 (437)
T TIGR01982 103 --------------------KVIEAALGGPLEELFAEFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIA 162 (437)
T ss_pred --------------------HHHHHHhCcCHHHHHhhCCCcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHH
Confidence 467788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhCCC---CCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCC
Q psy12972 449 TVQTLLRIAGFLYPK---FDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDG 525 (1578)
Q Consensus 449 ~l~~l~~~~~~~~~~---~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G 525 (1578)
+|+.++++++++.+. +++..+++|+.+.+.+|+||.+||+|++++++++++.+.|+||++|+++|+++||||||++|
T Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G 242 (437)
T TIGR01982 163 LLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDG 242 (437)
T ss_pred HHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECC
Confidence 999999999887663 68899999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCCCCCCCCeeEEecCCchhhhhhhhhcccCCCCCCCCCC
Q psy12972 526 VKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHSGNDVNTWLYPVDLGDKFRLVLATTLREDGYPDSGEWN 605 (1578)
Q Consensus 526 ~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHPGNilv~~v~liDfG~~~~l~l~~~~~~~g~~D~G~~~ 605 (1578)
.++.++......+.+...++..+++.++.|+|.+|+||||||||||++.. + +++++ +|+|+++
T Consensus 243 ~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~------~--g~i~l---------iDfG~~~ 305 (437)
T TIGR01982 243 IPLSDIAALDEAGLDRKALAENLARSFLNQVLRDGFFHADLHPGNIFVLK------D--GKIIA---------LDFGIVG 305 (437)
T ss_pred cccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECC------C--CcEEE---------EeCCCee
Confidence 99999876656677888999999999999999999999999999999531 1 12333 3777777
Q ss_pred ccccCcccchhhhHHHHHHhhhhhhhhccccCCCcccccc-cccCCHHHHHHHhhhhhhhcC
Q psy12972 606 PLEESPRMNFNLIMLWYTFLLNVLFINCAVSLDPYETLGV-PRTASLQEIRKNYKRLVVEWH 666 (1578)
Q Consensus 606 ~l~~~~r~~~~l~~lw~~~~l~~~~~~~~~~~d~y~iLgv-~~~as~~eIk~ayr~l~~~~H 666 (1578)
.++...|.. +..++.+++.... ....+...-+|. +++++.+.+++..+.+...+.
T Consensus 306 ~l~~~~r~~--l~~l~~a~~~~D~----~~l~~~l~~~g~~~~~~d~~~~~~~~~~~~~~~~ 361 (437)
T TIGR01982 306 RLSEEDRRY--LAEILYGFLNRDY----RRVAEVHFDAGYVPSDTDMAEFEQAIRAIGEPIF 361 (437)
T ss_pred ECCHHHHHH--HHHHHHHHHhcCH----HHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 765544433 3445544332221 111122223454 456777888888877776655
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG1236|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-42 Score=392.46 Aligned_cols=280 Identities=19% Similarity=0.223 Sum_probs=240.2
Q ss_pred HHHHHHHHHHhcCcchhhHHHHHhcCCCCCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhcCcccccccccCCCchhHH
Q psy12972 290 SANRILSMCLTNGGLYIKLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAA 369 (1578)
Q Consensus 290 ~a~~l~~~~~~~Gg~yiKlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~~~~~~~~~~g~~~~~~~~~f~~~p~~~~ 369 (1578)
.-+-|+++++..||+|||||||+|||+|+||+++|.+|++||.+++||||..+++.+..+||
T Consensus 120 W~~~L~kaLE~aGPtFIKLGQWAsTR~DlFs~afC~qLSKLHs~vt~Hs~a~T~k~l~qa~~------------------ 181 (565)
T KOG1236|consen 120 WLRLLLKALETAGPTFIKLGQWASTRRDLFSKAFCAQLSKLHSNVTPHSFAFTKKKLRQAFG------------------ 181 (565)
T ss_pred HHHHHHHHHHhcCCceEEecccccccccccCHHHHHHHHHHhccCCCCchHHHHHHHHHHHC------------------
Confidence 34567889999999999999999999999999999999999999999999988776554443
Q ss_pred HHHHHHHhhhhhhhhhhHHHHHHHHhCCChhhhccccCCcccccccceEEEEEEec-------C---------CCEEEEE
Q psy12972 370 SLAQALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTK-------E---------GVEVAVK 433 (1578)
Q Consensus 370 ~~~~~l~~~~~~~~~~~v~~~~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~-------~---------G~~VAVK 433 (1578)
++++++||.+|++.|||+|||||||+|+++ + .+.||||
T Consensus 182 --------------------------~~~~~eiF~efn~~PIGsG~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiK 235 (565)
T KOG1236|consen 182 --------------------------VKKIEEIFSEFNREPIGSGCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIK 235 (565)
T ss_pred --------------------------cCcHHHHHHhcCCcccccchhhhhhhhhhhHHHhhcccchhhhcCCccceeeee
Confidence 126899999999999999999999999864 1 2689999
Q ss_pred EecchhhhhHHHHHHHHHHHHHHHhhhCC--CCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeC
Q psy12972 434 VQYIDLRERFVGDIATVQTLLRIAGFLYP--KFDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWD 511 (1578)
Q Consensus 434 Vq~P~i~~~~~~Dl~~l~~l~~~~~~~~~--~~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~ 511 (1578)
|.||+++++++.|+.+|++.+++..+++. .+++...++.|...+..++|.++||.++.+|..+|++...|.+|+|+..
T Consensus 236 v~Hp~V~~~ir~Dl~Il~f~Akl~~~vP~l~wL~l~~~vkqF~v~ln~QvdL~~EA~hL~rF~~NF~~s~~V~fP~P~~~ 315 (565)
T KOG1236|consen 236 VLHPNVEKQIRLDLGILGFGAKLINNVPDLSWLSLPLEVKQFSVGLNAQVDLRQEALHLPRFTNNFSGSKKVLFPKPIAP 315 (565)
T ss_pred ccCccHHHHHHHHHHHHhhhhhhhhhcCccccccCcchHHHHHHHHHhhcchhhhhhhhHHHHHhcccceeecCCccccc
Confidence 99999999999999999999999997643 3577788999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEeccCCCcCCchhhHhhcCCC---HHHHHHHHHHHHHHHHHHcCccccCCCCCCCCCCeeEEecCCch----
Q psy12972 512 KSSTRVLTTEFIDGVKISDKEGLLEKGFS---LADVDRKLFTAFAEQIFQTGFVHADPHSGNDVNTWLYPVDLGDK---- 584 (1578)
Q Consensus 512 ~~t~~VLVME~i~G~~l~d~~~l~~~~~~---~~~v~~~l~~~~l~~i~~~G~vH~DpHPGNilv~~v~liDfG~~---- 584 (1578)
++++.||+.+|++|.++.....- .+.. .++++....+++++|++.++|+|+|+|||||+++...-+|-+..
T Consensus 316 ~~~~~vl~E~~~~Gl~v~~~v~~--~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~t~~~~~~~~~~ 393 (565)
T KOG1236|consen 316 LHTDLVLVETYERGLSVLRFVKW--KSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNKTEDNLRGVHKA 393 (565)
T ss_pred ccccceeeeeccccccHHhhhhc--ccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecCCCccccccccc
Confidence 99999999999999999876432 2222 35788889999999999999999999999999765444333321
Q ss_pred ----------------------hhhhhhhhcccCCCCCCCCCCccccCcccch
Q psy12972 585 ----------------------FRLVLATTLREDGYPDSGEWNPLEESPRMNF 615 (1578)
Q Consensus 585 ----------------------~~l~l~~~~~~~g~~D~G~~~~l~~~~r~~~ 615 (1578)
.+..+++..++..|+|.|+++.|+..+++|+
T Consensus 394 e~~~~i~~~L~~~~~e~~d~~~~~~~~~~~~P~lvflDtGiv~kLs~qn~~N~ 446 (565)
T KOG1236|consen 394 EKASAIKRGLEWFRSEVRDARFTDSPDLEYEPTLVFLDTGIVTKLSHQNQMNL 446 (565)
T ss_pred hhhhHHhhhhhhhhhhhhhhhhhccccccCCCeEEEecchhhhccChhhHHHH
Confidence 2233455567778999999999999999886
|
|
| >KOG4277|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-40 Score=355.59 Aligned_cols=355 Identities=13% Similarity=0.179 Sum_probs=286.4
Q ss_pred ccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCc--eEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccC
Q psy12972 869 PKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG--VGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKE 946 (1578)
Q Consensus 869 ~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~--v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~ 946 (1578)
+.+.+..|+|.||||||+|||++.|.|.++..++++.| |++|++||+..+.+|++|||+| ||||++|++|..+.|.
T Consensus 39 dnkdddiW~VdFYAPWC~HCKkLePiWdeVG~elkdig~PikVGKlDaT~f~aiAnefgiqG-YPTIk~~kgd~a~dYR- 116 (468)
T KOG4277|consen 39 DNKDDDIWFVDFYAPWCAHCKKLEPIWDEVGHELKDIGLPIKVGKLDATRFPAIANEFGIQG-YPTIKFFKGDHAIDYR- 116 (468)
T ss_pred hcccCCeEEEEeechhhhhcccccchhHHhCcchhhcCCceeecccccccchhhHhhhccCC-CceEEEecCCeeeecC-
Confidence 34668899999999999999999999999999998766 9999999999999999999998 9999999999888877
Q ss_pred CCCCHHHHHHHHHhhCCCccccccccccHH-HHhhcccCCCcEEEEEeccCCchHHHHHHHHhhcCCCeEEEEEEcccCC
Q psy12972 947 PSFSVQKMVEFFRLKLPYKLIVPLSATNVD-AFLDNWREDNKVHALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQED 1025 (1578)
Q Consensus 947 G~~s~~~L~~fi~~~lp~~vv~~it~~~~~-~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~a~~~~~~v~Fg~v~~~~~~ 1025 (1578)
|+|+.+.|++|..+-..+ ++..++.++.+ .-++.. ..|+.+||+..+.|....+..|++.+-.+...|. .
T Consensus 117 G~R~Kd~iieFAhR~a~a-iI~pi~enQ~~fehlq~R---hq~ffVf~Gtge~PL~d~fidAASe~~~~a~FfS-----a 187 (468)
T KOG4277|consen 117 GGREKDAIIEFAHRCAAA-IIEPINENQIEFEHLQAR---HQPFFVFFGTGEGPLFDAFIDAASEKFSVARFFS-----A 187 (468)
T ss_pred CCccHHHHHHHHHhcccc-eeeecChhHHHHHHHhhc---cCceEEEEeCCCCcHHHHHHHHhhhheeeeeeec-----c
Confidence 889999999999887754 56666654433 334443 7899999999999999999999876655554444 5
Q ss_pred ChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhhcCCCCCCcccCchhhhhhcCCCCceEEEEEecCC
Q psy12972 1026 SSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVKKLCVVLFSEDS 1105 (1578)
Q Consensus 1026 ~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~nk~p~vpeLts~~~~~~~c~~~~lcVll~~~~~ 1105 (1578)
+++++..++-.+..|.+.|||++.... ...-+...|..||+.+++|-+-..++.+..+... .++++++.+.+.+
T Consensus 188 seeVaPe~~~~kempaV~VFKDetf~i-----~de~dd~dLseWinRERf~~fLa~dgflL~EiG~-sGKLVaLaVidEk 261 (468)
T KOG4277|consen 188 SEEVAPEENDAKEMPAVAVFKDETFEI-----EDEGDDEDLSEWINRERFPGFLAADGFLLAEIGA-SGKLVALAVIDEK 261 (468)
T ss_pred ccccCCcccchhhccceEEEccceeEE-----EecCchhHHHHHHhHhhccchhhcccchHHHhCc-CCceEEEEEeccc
Confidence 677777777777889999998753222 1223456799999999999999999988877765 6788888886544
Q ss_pred c------chHHHHHHHHHHHhhccCCC-----CcEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEEcCCcceEee
Q psy12972 1106 P------EHDASRHTLRRFAQESRFVH-----NNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKKIKYGW 1174 (1578)
Q Consensus 1106 ~------~~~~~~~~lr~vA~~~~~~~-----~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~n~~~~kY~~ 1174 (1578)
. ++.+......++|++ +++ ++++|+|+|+ .++++.+.|.. ...|.+++.|++...|.+
T Consensus 262 hk~nns~eh~~~~ki~eEaakd--~Rd~pdfh~dFQF~hlDG---nD~~nqilM~a------ls~P~l~i~NtsnqeYfL 330 (468)
T KOG4277|consen 262 HKFNNSSEHREFHKIAEEAAKD--LRDHPDFHNDFQFAHLDG---NDLANQILMAA------LSEPHLFIFNTSNQEYFL 330 (468)
T ss_pred cccCCcchhHHHHHHHHHHHHH--HHhChhhhhhceeeccch---hHHHHHHHHHh------hcCCeEEEEecCchheee
Confidence 2 223333344445555 444 3599999999 77888886665 678999999999988876
Q ss_pred ccCCcccccccccccHHHHHHHhhh----hhcCCcccccccccccccccchhhhhHHHHHHHHHHHHHHHHHhhccccch
Q psy12972 1175 LLGDAVDDWKDYNTTKDRLDAGLRS----LVNDPYNNLLYDTALKEISDEYIQSLGVRIFNRIFMHIEMAQQSLSRQHIL 1250 (1578)
Q Consensus 1175 l~~~~~~~~~~~~~t~e~l~~fL~~----ll~g~~~~l~~~~~lp~l~dE~~~~~~~R~~~~~~~~~~~~~~~~~~~~~l 1250 (1578)
-+. .....+-+.+..||+. +.+++.. ..+|..+++|++|..+.+..++..++..+|+|
T Consensus 331 se~------d~qikniedilqFientsegI~d~Tie------------A~GGd~iLqRiKRiaFdaksnIaqiF~sqPLl 392 (468)
T KOG4277|consen 331 SED------DPQIKNIEDILQFIENTSEGIDDETIE------------AFGGDHILQRIKRIAFDAKSNIAQIFASQPLL 392 (468)
T ss_pred ccC------ChhhhhHHHHHHHHhccccccccccee------------ecCchHHHHHHHHHHHHHHHHHHHHHhcCchh
Confidence 443 3567778888899987 5555554 78899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q psy12972 1251 PAVSLIFTVIIIVVLAMIM 1269 (1578)
Q Consensus 1251 ~~~s~~~~~~fi~~~~y~i 1269 (1578)
.|+++++|++||+++||+|
T Consensus 393 gc~LFGlPi~~iSIiCYgI 411 (468)
T KOG4277|consen 393 GCCLFGLPIAFISIICYGI 411 (468)
T ss_pred hhhhhcCcHHHhhhheeee
Confidence 9999999999999999999
|
|
| >KOG0190|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=326.52 Aligned_cols=334 Identities=15% Similarity=0.207 Sum_probs=272.9
Q ss_pred eEEEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC--ceEEEEEECccchhhHhHcCccccC
Q psy12972 853 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHVHNEQGLARRLGVGSQL 930 (1578)
Q Consensus 853 ~~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~--~v~~a~VDc~~~~~L~~k~gV~~~~ 930 (1578)
-.+++||.+||.+.| ..+..++|.|||||||||++++|+|+++|+.|+.. .+.+++|||+++.++|++|+|+| |
T Consensus 25 ~~Vl~Lt~dnf~~~i---~~~~~vlVeFYAPWCghck~LaPey~kAA~~Lke~~s~i~LakVDat~~~~~~~~y~v~g-y 100 (493)
T KOG0190|consen 25 EDVLVLTKDNFKETI---NGHEFVLVEFYAPWCGHCKALAPEYEKAATELKEEGSPVKLAKVDATEESDLASKYEVRG-Y 100 (493)
T ss_pred cceEEEecccHHHHh---ccCceEEEEEEchhhhhhhhhCcHHHHHHHHhhccCCCceeEEeecchhhhhHhhhcCCC-C
Confidence 357889999999998 66789999999999999999999999999999876 49999999999999999999998 9
Q ss_pred CcEEEEcCCccccccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEeccCCchHHHHHHHHhhc
Q psy12972 931 PQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAFKH 1010 (1578)
Q Consensus 931 PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~a~~~ 1010 (1578)
||+.+|++|.....|.|+|++++|+.|++++.+|+...+.+.+.++.|+.+. +..++++|.+.....-.++..+...
T Consensus 101 PTlkiFrnG~~~~~Y~G~r~adgIv~wl~kq~gPa~~~l~~~~~a~~~l~~~---~~~vig~F~d~~~~~~~~~~~a~~l 177 (493)
T KOG0190|consen 101 PTLKIFRNGRSAQDYNGPREADGIVKWLKKQSGPASKTLKTVDEAEEFLSKK---DVVVIGFFKDLESLAESFFDAASKL 177 (493)
T ss_pred CeEEEEecCCcceeccCcccHHHHHHHHHhccCCCceecccHHHHHhhccCC---ceEEEEEecccccchHHHHHHHHhc
Confidence 9999999999755556999999999999999998888887889999999886 8899999987777767777788899
Q ss_pred CCCeEEEEEEcccCCChhHHhhcCCCCC-CcEEEEeccCCCCCccccccCCCCchhhhhhhhcCCCCCCcccCchhhhhh
Q psy12972 1011 RTTIVFGVIVYDQEDSSSVFQRFKVPGD-KDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDA 1089 (1578)
Q Consensus 1011 ~~~v~Fg~v~~~~~~~~~l~~kf~V~~~-~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~nk~p~vpeLts~~~~~~ 1089 (1578)
++.+.|+.+ ++.+++++++++.. .+.+++++...+....+ .+++....|..||..+++|++.++|.++.-..
T Consensus 178 ~~d~~F~~t-----s~~~~~~~~~~~~~~~~~i~l~kk~d~~~~~~--~~~~~~~~l~~Fi~~~~~plv~~ft~~~~~~~ 250 (493)
T KOG0190|consen 178 RDDYKFAHT-----SDSDVAKKLELNTEGTFPIVLFKKFDELLVKY--DGSFTPELLKKFIQENSLPLVTEFTVANNAKI 250 (493)
T ss_pred cccceeecc-----CcHhHHhhccCCCCCcceEEeccccccchhhc--ccccCHHHHHHHHHHhcccccceeccccccee
Confidence 999999977 78899999988631 23477776655544444 66777778999999999999999998665444
Q ss_pred cCCCCceEEEEEec-CCcchHHHHHHHHHHHhhccCCCCcEEEEEEecCcchHHHHhccCCCCCCccccce-eEEEEEcC
Q psy12972 1090 VCPVKKLCVVLFSE-DSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHI-AAMWRMDY 1167 (1578)
Q Consensus 1090 ~c~~~~lcVll~~~-~~~~~~~~~~~lr~vA~~~~~~~~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~l-p~l~~~n~ 1167 (1578)
....-.+-++++.. .....+.++..++++|++ |+++ ++|+++|.+..+..++.|.+.+ .+. +.++.++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~vAk~--f~~~-l~Fi~~d~e~~~~~~~~~Gl~~------~~~~~~~v~~~~ 321 (493)
T KOG0190|consen 251 YSSFVKLGLDFFVFFKCNRFEELRKKFEEVAKK--FKGK-LRFILIDPESFARVLEFFGLEE------EQLPIRAVILNE 321 (493)
T ss_pred eccccccceeEEeccccccHHHHHHHHHHHHHh--cccc-eEEEEEChHHhhHHHHhcCccc------ccCCeeEEeecc
Confidence 43212445555553 334778999999999999 9996 9999999988888888885443 222 46666677
Q ss_pred CcceEeeccCCcccccccccccHHHHHHHhhhhhcCCcccccccccccccccchhhhhH
Q psy12972 1168 KKIKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTALKEISDEYIQSLG 1226 (1578)
Q Consensus 1168 ~~~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~~~l~~~~~lp~l~dE~~~~~~ 1226 (1578)
++.+|.+-.+ +.+.++|+.|+..++.|... |.+.++.+|..+
T Consensus 322 ~~~Ky~~~~e---------~~~~~~ie~f~~~~l~Gk~~--------p~~kSqpiPe~~ 363 (493)
T KOG0190|consen 322 DGSKYPLEEE---------ELDQENIESFVKDFLDGKVK--------PHLKSQPIPEDN 363 (493)
T ss_pred ccccccCccc---------cccHHHHHHHHHHHhcCccc--------cccccCCCCccc
Confidence 7788875443 35667899999999999998 888888888764
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=348.16 Aligned_cols=145 Identities=22% Similarity=0.282 Sum_probs=134.8
Q ss_pred HHHhHHHHHHHHHHHHhcCcchhhhhhhhhcCCCCCChhHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCChhhccccccc
Q psy12972 83 ASVHQRSANRILSMCLTNGGLYIKLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDE 162 (1578)
Q Consensus 83 ~~~~~~~a~~l~~~~~~lgg~~iK~GQ~ls~r~d~~p~~~~~~l~~Lqd~~p~~~~~~~~~~~~~~lg~~~~~~F~~f~~ 162 (1578)
.....+.|++|+.+|++|||+|||+||+||||+|++|++|+++|++|||+|||+|+++++++|+++||++++++|++||+
T Consensus 51 ~~~~~~~~~rL~~~L~~LGPtfIK~GQ~LStR~Dl~p~e~~~eL~~LQD~vpp~~~~~~~~iie~eLG~~iee~F~eF~~ 130 (517)
T COG0661 51 EELREKRAERLRLALEELGPTFIKLGQILSTRPDLVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEELFSEFEP 130 (517)
T ss_pred HHHhHhHHHHHHHHHHHhCCchhhhhhHHhcCccccCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHHHHHHcCC
Confidence 34556889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeeceeee----CCCEEEEEEeCCCchhhHHhhHHHHHhhccCCCccCccCccCCCC---hhhhHhh
Q psy12972 163 NPIAAASLAQSMV----TDEALGIKLHEFHEATNERPDHEFHEATNERPDHEFHEATNERPD---HEFHEAT 227 (1578)
Q Consensus 163 ~PiasASi~QVh~----~g~~vavKv~~p~v~~~i~~Dl~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 227 (1578)
+|||||||||||+ +|++||||||||||++.|++||++|+.++...+..++..-+-+|. .||.+.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l 202 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRL 202 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHH
Confidence 9999999999999 899999999999999999999999999999999999886666665 3555544
|
|
| >KOG1235|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-32 Score=332.58 Aligned_cols=144 Identities=33% Similarity=0.388 Sum_probs=136.1
Q ss_pred CCCCcchhhHHHHHhHHHHHHHHHHHHhcCcchhhhhhhhhcCCCCCChhHHHHHHHhhcCCCCCCHHHHHHHHHHHhCC
Q psy12972 72 DEDSEYYPSILASVHQRSANRILSMCLTNGGLYIKLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGC 151 (1578)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~a~~l~~~~~~lgg~~iK~GQ~ls~r~d~~p~~~~~~l~~Lqd~~p~~~~~~~~~~~~~~lg~ 151 (1578)
....+.........|.+.|++|+++|+.|||+|||+||++|||+|++|+||.++|+.|||++||+|++++.++|++|||.
T Consensus 76 ~~~~e~~~~~~~~~~~~~a~~L~e~~~~nGg~yIKlGQ~lst~~dllP~Eyv~~L~~LqD~~Pp~~~ee~~~i~e~ElG~ 155 (538)
T KOG1235|consen 76 LASSESRLSKLSKVLLSAAERLLELFLRNGGTYIKLGQHLSTRPDLLPKEYVKTLSELQDQAPPFPWEEAFKIFEEELGA 155 (538)
T ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHcCCeEEEechhhccccccCcHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCC
Confidence 34455555667788888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred Chhhccccccccceeeeeeceeee----CCCEEEEEEeCCCchhhHHhhHHHHHhhccCCCccCccCc
Q psy12972 152 THSQLFRSFDENPIAAASLAQSMV----TDEALGIKLHEFHEATNERPDHEFHEATNERPDHEFHEAT 215 (1578)
Q Consensus 152 ~~~~~F~~f~~~PiasASi~QVh~----~g~~vavKv~~p~v~~~i~~Dl~~~~~~~~~~~~~~~~~~ 215 (1578)
+++++|++||++|||||||||||| +|++||||||||||++.+..|+.+++.+....+..|++++
T Consensus 156 ~ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~ 223 (538)
T KOG1235|consen 156 PIEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFD 223 (538)
T ss_pred CHHHHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCc
Confidence 999999999999999999999999 9999999999999999999999999999999999988776
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=328.88 Aligned_cols=175 Identities=14% Similarity=0.177 Sum_probs=150.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccCCCCCCcchhh--HH---HHHhHHHHHHHHHHHHhcCcchhhhhhhhhcCCCCCCh
Q psy12972 46 GIKRFIRSSYTVAVISFDYWWSLRDIDEDSEYYPS--IL---ASVHQRSANRILSMCLTNGGLYIKLGQGMVSLDHVLPR 120 (1578)
Q Consensus 46 ~~~R~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~a~~l~~~~~~lgg~~iK~GQ~ls~r~d~~p~ 120 (1578)
.+.|+.+|+++++++++++................ .| .......|++++.+|++|||+|||+||+||||+|++|+
T Consensus 3 ~~~R~~~I~~v~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rlr~aLe~LGp~fIKlGQ~LStR~DllP~ 82 (537)
T PRK04750 3 ELFRLYKIIRVFLRYGLDELILSHRLTRPLRLWRRSLFWMPNRHKDKPRGERLRLALEELGPIFVKFGQMLSTRRDLFPP 82 (537)
T ss_pred hhHHHHHHHHHHHHhChHHHhhhccccchhhhhhhhhhhhhcccccccHHHHHHHHHHHcCcHHHHHHHHHHcCcccCCH
Confidence 46799999999999999987643222211100000 00 11122569999999999999999999999999999999
Q ss_pred hHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCChhhccccccccceeeeeeceeee----C-CCEEEEEEeCCCchhhHHh
Q psy12972 121 QYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQSMV----T-DEALGIKLHEFHEATNERP 195 (1578)
Q Consensus 121 ~~~~~l~~Lqd~~p~~~~~~~~~~~~~~lg~~~~~~F~~f~~~PiasASi~QVh~----~-g~~vavKv~~p~v~~~i~~ 195 (1578)
+|+++|++|||+|||+|+++++++|+++||.+++++|++||++|+|||||||||+ + |++||||||||||++.|..
T Consensus 83 ~~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~ 162 (537)
T PRK04750 83 DIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDA 162 (537)
T ss_pred HHHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 5 9999999999999999999
Q ss_pred hHHHHHhhccCCCccCccCccCCCC
Q psy12972 196 DHEFHEATNERPDHEFHEATNERPD 220 (1578)
Q Consensus 196 Dl~~~~~~~~~~~~~~~~~~~~~~~ 220 (1578)
||++|+.++...+..+++...-+|.
T Consensus 163 Dl~~l~~~a~~l~~~~~~~~~l~~~ 187 (537)
T PRK04750 163 DLALMYRLARWVERLLPDGRRLKPR 187 (537)
T ss_pred HHHHHHHHHHHHHHhCcccccCCHH
Confidence 9999999999999999887776664
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-31 Score=324.03 Aligned_cols=173 Identities=18% Similarity=0.157 Sum_probs=146.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc-cCCCCCCcchh-----hHHHHHhHHHHHHHHHHHHhcCcchhhhhhhhhcCCCCCCh
Q psy12972 47 IKRFIRSSYTVAVISFDYWWSL-RDIDEDSEYYP-----SILASVHQRSANRILSMCLTNGGLYIKLGQGMVSLDHVLPR 120 (1578)
Q Consensus 47 ~~R~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~a~~l~~~~~~lgg~~iK~GQ~ls~r~d~~p~ 120 (1578)
+.|+.+|+.+++++++++.... ........... ..........|+++++++++|||+|||+||+||||+|++|+
T Consensus 1 ~~R~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lGp~fiKlGQ~lS~r~dllp~ 80 (437)
T TIGR01982 1 LRRLRRIIRVLIRYGFLALVESPIGPLSLRLLRRLLLPFSNRENRLMSRGERLRLALEELGPTFIKFGQTLSTRADLLPA 80 (437)
T ss_pred CHHHHHHHHHHHHhCcHHHhhhhcccchhhhHhhhhhhhcccccccccHHHHHHHHHHHcCchhHHHhHHHHhCcccCCH
Confidence 4699999999999999986643 11100000000 00011123569999999999999999999999999999999
Q ss_pred hHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCChhhccccccccceeeeeeceeee----CCCEEEEEEeCCCchhhHHhh
Q psy12972 121 QYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQSMV----TDEALGIKLHEFHEATNERPD 196 (1578)
Q Consensus 121 ~~~~~l~~Lqd~~p~~~~~~~~~~~~~~lg~~~~~~F~~f~~~PiasASi~QVh~----~g~~vavKv~~p~v~~~i~~D 196 (1578)
+|+++|++|||+|||+|+++++++|+++||++++++|++||++|+|||||||||+ +|++||||||||||++.|..|
T Consensus 81 ~~~~~L~~Lqd~v~p~~~~~~~~~l~~elg~~~~~~F~~fd~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~D 160 (437)
T TIGR01982 81 DIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAAD 160 (437)
T ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHhCcCHHHHHhhCCCcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHHHHhhccCCCccCccCccCCC
Q psy12972 197 HEFHEATNERPDHEFHEATNERP 219 (1578)
Q Consensus 197 l~~~~~~~~~~~~~~~~~~~~~~ 219 (1578)
+++|+.++...+..++.....++
T Consensus 161 l~~l~~~~~~~~~~~~~~~~~~~ 183 (437)
T TIGR01982 161 IALLYRLARIVERLSPDSRRLRP 183 (437)
T ss_pred HHHHHHHHHHHHHhCccccccCH
Confidence 99999999988888776554443
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG1234|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-29 Score=275.83 Aligned_cols=214 Identities=27% Similarity=0.399 Sum_probs=196.0
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHHHhCCChhhhccccCCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHH
Q psy12972 369 ASLAQALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIA 448 (1578)
Q Consensus 369 ~~~~~~l~~~~~~~~~~~v~~~~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~ 448 (1578)
..|.+++..-|..+|.+++.+++..++|.+|.+-|++||+.|.|+|||||||+|++++|++||||||+||+.+.++.|+.
T Consensus 15 ~qi~erVrqsAd~MP~~Ql~~vm~~~lG~nW~~Kf~~fd~~P~AaASIGQVHrArl~~g~eVavKiQYPGva~sI~SD~~ 94 (363)
T KOG1234|consen 15 GQILERVRQSADFMPPKQLEPVMWGELGGNWAQKFSSFDDGPFAAASIGQVHRARLADGPEVAVKIQYPGVARSIDSDAN 94 (363)
T ss_pred HHHHHHhcCccccCChhhhhHHHhhhhchhHHHHHHhhccCccccccHHHHHHHHhcCCCeeeeecCCCchhhhccCcHH
Confidence 45667777778888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcC
Q psy12972 449 TVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKI 528 (1578)
Q Consensus 449 ~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l 528 (1578)
.+..++.+.+.++..+-+..+++-.++.|..|.||++||+.+.+|+..+++.+.++||.|+.++||.|||+||++.|.+|
T Consensus 95 nl~~lLn~s~llPkGLFLd~~i~~ArkEL~~ECDYqrEA~~~~kFr~LLs~~p~f~VP~Vv~Elct~rvlt~el~~G~pi 174 (363)
T KOG1234|consen 95 NLSRLLNFSGLLPKGLFLDVLIEVARKELKWECDYQREAASALKFRPLLSDDPNFYVPRVVDELCTVRVLTLELGQGLPI 174 (363)
T ss_pred HHHHHHhhcccccccccHHHHHHHHHHhcccccchHHHHHHHhhhHHHhcCCCCcchhHHHHhhccchhhhhhhhcCccc
Confidence 99999998888877888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCCCCCCCC----eeEEecCCch
Q psy12972 529 SDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHSGNDVNT----WLYPVDLGDK 584 (1578)
Q Consensus 529 ~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHPGNilv~----~v~liDfG~~ 584 (1578)
.....+.+ ..+..|+..+++.+++.||...|...||.-+|++.+ ++.++|||..
T Consensus 175 d~~~~~sQ--~~rn~i~~~~l~lcLrEif~f~fMQTDPNWsNFly~~~tk~i~LlDFGAs 232 (363)
T KOG1234|consen 175 DKTAKLSQ--ETRNYIGYKLLELCLREIFEFRFMQTDPNWSNFLYNGRTKKIELLDFGAS 232 (363)
T ss_pred hhhhcccH--HHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHhccCCCcceEEEEecccc
Confidence 87644322 235679999999999999999999999999999954 4788888865
|
|
| >PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli [] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-27 Score=242.22 Aligned_cols=117 Identities=39% Similarity=0.625 Sum_probs=113.6
Q ss_pred HHhCCChhhhccccCCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCC--CCHHHHH
Q psy12972 393 EDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPK--FDFQWVI 470 (1578)
Q Consensus 393 ~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~--~~~~~~~ 470 (1578)
++||++++++|++||++|||||||||||+|++++|++||||||||++++.+..|+.+|+.+++++.++.+. +++.+++
T Consensus 1 e~lG~~~~~~F~~fd~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (119)
T PF03109_consen 1 EELGKPIDEIFDEFDPEPLASASIAQVHRARLKDGEEVAVKVQRPGIEEQIEADLRILRRLARLLERLPPFRRLDLEEIV 80 (119)
T ss_pred CCcCCCHHHHHHHCCcchhhheehhhheeeeecccchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHcccccccCHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999998776 8999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEe
Q psy12972 471 NELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRIL 509 (1578)
Q Consensus 471 ~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~ 509 (1578)
+++++.+.+|+||++||+|+++|++++++.+.|+||+||
T Consensus 81 ~e~~~~l~~ElDf~~Ea~n~~~~~~~~~~~~~v~vP~vy 119 (119)
T PF03109_consen 81 DEFRDSLLEELDFRREAANLERFRKNFADSPRVYVPKVY 119 (119)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCEecCCCC
Confidence 999999999999999999999999999999999999987
|
These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins. |
| >TIGR01130 ER_PDI_fam protein disulfide isomerases, eukaryotic | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.4e-25 Score=273.93 Aligned_cols=395 Identities=16% Similarity=0.240 Sum_probs=287.6
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCc--eEEEEEECccchhhHhHcCccccCCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG--VGFFTVHVHNEQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~--v~~a~VDc~~~~~L~~k~gV~~~~PT 932 (1578)
++++|.++|.+.+ +.+++++|.||||||++|+++.|.|.++|+.+++.+ +.+++|||+.+.++|++++|.+ +||
T Consensus 3 v~~l~~~~~~~~i---~~~~~~~v~f~a~wC~~c~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~-~Pt 78 (462)
T TIGR01130 3 VLVLTKDNFDDFI---KSHEFVLVEFYAPWCGHCKSLAPEYEKAADELKKKGPPIKLAKVDATEEKDLAQKYGVSG-YPT 78 (462)
T ss_pred ceECCHHHHHHHH---hcCCCEEEEEECCCCHHHHhhhHHHHHHHHHHhhcCCceEEEEEECCCcHHHHHhCCCcc-ccE
Confidence 4578999999877 446799999999999999999999999999987654 9999999999999999999998 999
Q ss_pred EEEEcCCcc-ccccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEeccCCchHHHHHHHHh-hc
Q psy12972 933 IALLTDGRT-SFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAF-KH 1010 (1578)
Q Consensus 933 l~lf~~G~~-~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~a~-~~ 1010 (1578)
+++|++|+. ...+.|.++.++|.+|+.+.+++++....+.++++.++... +..+++||.+...+....+..++ .+
T Consensus 79 ~~~~~~g~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~---~~~vi~~~~~~~~~~~~~~~~~a~~~ 155 (462)
T TIGR01130 79 LKIFRNGEDSVSDYNGPRDADGIVKYMKKQSGPAVKEIETVADLEAFLADD---DVVVIGFFKDLDSELNDTFLSVAEKL 155 (462)
T ss_pred EEEEeCCccceeEecCCCCHHHHHHHHHHhcCCCceeecCHHHHHHHHhcC---CcEEEEEECCCCcHHHHHHHHHHHHh
Confidence 999999987 45556999999999999999987766666778899999875 77788888765555555555544 44
Q ss_pred CCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCC--CchhhhhhhhcCCCCCCcccCchhhhh
Q psy12972 1011 RTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSI--PVPTLQDITDNNPYLTLPRISSQSMLD 1088 (1578)
Q Consensus 1011 ~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l--~~~~L~~fI~~nk~p~vpeLts~~~~~ 1088 (1578)
.+...| ++. ..+..+.++++.. .+++++|+............++. +...|..||..+++|.+++++..++..
T Consensus 156 ~~~~~~-~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~fi~~~~~p~v~~~~~~~~~~ 229 (462)
T TIGR01130 156 RDVYFF-FAH---SSDVAAFAKLGAF--PDSVVLFKPKDEDEKFSKVDGEMDTDVSDLEKFIRAESLPLVGEFTQETAAK 229 (462)
T ss_pred hhccce-EEe---cCCHHHHhhcCCC--CCcEEEecccccccccccccCcccCCHHHHHHHHHHcCCCceEeeCCcchhh
Confidence 444442 221 1455677777764 35666675432222211222333 336899999999999999999887655
Q ss_pred hcCCCCceEEEEEecCCc--chHHHHHHHHHHHhhccCCCCcEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEEc
Q psy12972 1089 AVCPVKKLCVVLFSEDSP--EHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMD 1166 (1578)
Q Consensus 1089 ~~c~~~~lcVll~~~~~~--~~~~~~~~lr~vA~~~~~~~~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~n 1166 (1578)
..- .+.++++++..+.. ..+...+.++++|++ |++..+.|+|+|......+++.+.... ..+|.+++.+
T Consensus 230 ~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~--~~~~~i~f~~~d~~~~~~~~~~~~~~~------~~~P~~vi~~ 300 (462)
T TIGR01130 230 YFE-SGPLVVLYYNVDESLDPFEELRNRFLEAAKK--FRGKFVNFAVADEEDFGRELEYFGLKA------EKFPAVAIQD 300 (462)
T ss_pred HhC-CCCceeEEEEecCCchHHHHHHHHHHHHHHH--CCCCeEEEEEecHHHhHHHHHHcCCCc------cCCceEEEEe
Confidence 543 33455555543322 247888999999999 886459999999988889988873221 3588888888
Q ss_pred CCc-ceEeeccCCcccccccccccHHHHHHHhhhhhcCCcccccccccccccccchhhhhHHHHHHHHHHHHHHHHHhhc
Q psy12972 1167 YKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTALKEISDEYIQSLGVRIFNRIFMHIEMAQQSLS 1245 (1578)
Q Consensus 1167 ~~~-~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~~~l~~~~~lp~l~dE~~~~~~~R~~~~~~~~~~~~~~~~~ 1245 (1578)
..+ .+|....+ ..|.+.|..||+.+++|... |...+|..|.-
T Consensus 301 ~~~~~~y~~~~~---------~~~~~~i~~fi~~~~~g~~~--------~~~~se~~p~~-------------------- 343 (462)
T TIGR01130 301 LEGNKKYPMDQE---------EFSSENLEAFVKDFLDGKLK--------PYLKSEPIPED-------------------- 343 (462)
T ss_pred CCcccccCCCcC---------CCCHHHHHHHHHHHhcCCCC--------eeeccCCCCcc--------------------
Confidence 776 56753221 46889999999999999998 77777766543
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHhcccccccCCCccccccccccccccccccccccceeeeeecccccceeeecCCC
Q psy12972 1246 RQHILPAVSLIFTVIIIVVLAMIMNHYMKLEEEEIPSTTSSMRNHSVNKEKKHKETKQELKLHALRAETYNGLVVLLKPG 1325 (1578)
Q Consensus 1246 ~~~~l~~~s~~~~~~fi~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~y~~~~~~lkpg 1325 (1578)
.. . .+..|.+.+|+..| +.+|
T Consensus 344 ~~----------------------------------------~-----------------~v~~l~~~~f~~~v--~~~~ 364 (462)
T TIGR01130 344 DE----------------------------------------G-----------------PVKVLVGKNFDEIV--LDET 364 (462)
T ss_pred CC----------------------------------------C-----------------ccEEeeCcCHHHHh--ccCC
Confidence 01 0 26678888888876 3466
Q ss_pred ceEEEEEEc--ccchHHhHHHHhhceecccc-cceeeeEEEEecc
Q psy12972 1326 CRTLILFID--NKSSRKLVSKFHAMVWPYRK-NKSLMFGYLNIER 1367 (1578)
Q Consensus 1326 ~~~~vl~~~--~~s~~~ll~~f~~~v~~~~~-~~~l~f~~l~~~k 1367 (1578)
.-.+|..-. +.....+.+.|.+..--+++ ++.+.|+.+++++
T Consensus 365 ~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~i~~~~id~~~ 409 (462)
T TIGR01130 365 KDVLVEFYAPWCGHCKNLAPIYEELAEKYKDAESDVVIAKMDATA 409 (462)
T ss_pred CeEEEEEECCCCHhHHHHHHHHHHHHHHhhcCCCcEEEEEEECCC
Confidence 544444442 23335566666665555655 4479999999988
|
Members of this family have at least two protein-disulfide domains, each similar to thioredoxin but with the redox-active disulfide in the motif PWCGHCK, and an ER retention signal at the extreme C-terminus (KDEL, HDEL, and similar motifs). |
| >KOG0190|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.1e-26 Score=271.91 Aligned_cols=101 Identities=18% Similarity=0.384 Sum_probs=85.4
Q ss_pred eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC-ceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~-~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
.+..+||++.+.+. ++.+||.|||||||||++++|.|+++|+.+++. +|.+|++|+|.|.- ...++++ ||||++
T Consensus 370 vvVgknfd~iv~de--~KdVLvEfyAPWCgHCk~laP~~eeLAe~~~~~~~vviAKmDaTaNd~--~~~~~~~-fPTI~~ 444 (493)
T KOG0190|consen 370 VVVGKNFDDIVLDE--GKDVLVEFYAPWCGHCKALAPIYEELAEKYKDDENVVIAKMDATANDV--PSLKVDG-FPTILF 444 (493)
T ss_pred EEeecCHHHHhhcc--ccceEEEEcCcccchhhhhhhHHHHHHHHhcCCCCcEEEEeccccccC--ccccccc-cceEEE
Confidence 45566788877644 788999999999999999999999999999986 49999999998842 3457887 999999
Q ss_pred EcCCc--cccccCCCCCHHHHHHHHHhhC
Q psy12972 936 LTDGR--TSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 936 f~~G~--~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|+.|. ....|+|.|+.+++..|+.+..
T Consensus 445 ~pag~k~~pv~y~g~R~le~~~~fi~~~a 473 (493)
T KOG0190|consen 445 FPAGHKSNPVIYNGDRTLEDLKKFIKKSA 473 (493)
T ss_pred ecCCCCCCCcccCCCcchHHHHhhhccCC
Confidence 98876 3466679999999999998765
|
|
| >KOG1236|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-24 Score=247.80 Aligned_cols=130 Identities=18% Similarity=0.228 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHHhcCcchhhhhhhhhcCCCCCChhHHHHHHHhhcCCCCCCHHHHHHHHHHHhCC-Chhhccccccccce
Q psy12972 87 QRSANRILSMCLTNGGLYIKLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGC-THSQLFRSFDENPI 165 (1578)
Q Consensus 87 ~~~a~~l~~~~~~lgg~~iK~GQ~ls~r~d~~p~~~~~~l~~Lqd~~p~~~~~~~~~~~~~~lg~-~~~~~F~~f~~~Pi 165 (1578)
.-+-+-|+.+++..||+|||||||.|||+|+||+++|.+|++||.+|+|+|+...++.|++++|. .++++|++|++.||
T Consensus 118 ~lW~~~L~kaLE~aGPtFIKLGQWAsTR~DlFs~afC~qLSKLHs~vt~Hs~a~T~k~l~qa~~~~~~~eiF~efn~~PI 197 (565)
T KOG1236|consen 118 TLWLRLLLKALETAGPTFIKLGQWASTRRDLFSKAFCAQLSKLHSNVTPHSFAFTKKKLRQAFGVKKIEEIFSEFNREPI 197 (565)
T ss_pred HHHHHHHHHHHHhcCCceEEecccccccccccCHHHHHHHHHHhccCCCCchHHHHHHHHHHHCcCcHHHHHHhcCCccc
Confidence 45677899999999999999999999999999999999999999999999999999999999997 89999999999999
Q ss_pred eeeeeceeee--------------------CCCEEEEEEeCCCchhhHHhhHHHHHhhccC----CCccCccCcc
Q psy12972 166 AAASLAQSMV--------------------TDEALGIKLHEFHEATNERPDHEFHEATNER----PDHEFHEATN 216 (1578)
Q Consensus 166 asASi~QVh~--------------------~g~~vavKv~~p~v~~~i~~Dl~~~~~~~~~----~~~~~~~~~~ 216 (1578)
||+||||||+ ..+.|||||.||+|+++|+.|+.||++.+.. |.+.|.+.|.
T Consensus 198 GsG~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl~Il~f~Akl~~~vP~l~wL~l~~ 272 (565)
T KOG1236|consen 198 GSGCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDLGILGFGAKLINNVPDLSWLSLPL 272 (565)
T ss_pred ccchhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHHHHHHHHHhhhhhhhhhcCccccccCcc
Confidence 9999999998 2368999999999999999999999887654 4444554443
|
|
| >PTZ00102 disulphide isomerase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-22 Score=254.91 Aligned_cols=316 Identities=16% Similarity=0.198 Sum_probs=232.2
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC--ceEEEEEECccchhhHhHcCccccCCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHVHNEQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~--~v~~a~VDc~~~~~L~~k~gV~~~~PT 932 (1578)
+..++.++|++.+ +.+++++|.||||||++|+++.|.|.++|+.+++. ++.+++|||+.+.++|++|+|.+ |||
T Consensus 34 v~~l~~~~f~~~i---~~~~~~lv~f~a~wC~~Ck~~~p~~~~~a~~~~~~~~~i~~~~vd~~~~~~l~~~~~i~~-~Pt 109 (477)
T PTZ00102 34 VTVLTDSTFDKFI---TENEIVLVKFYAPWCGHCKRLAPEYKKAAKMLKEKKSEIVLASVDATEEMELAQEFGVRG-YPT 109 (477)
T ss_pred cEEcchhhHHHHH---hcCCcEEEEEECCCCHHHHHhhHHHHHHHHHHHhcCCcEEEEEEECCCCHHHHHhcCCCc-ccE
Confidence 5678999999977 44679999999999999999999999999988643 39999999999999999999998 999
Q ss_pred EEEEcCCccccccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEeccCCchHHHHHHHHh-hcC
Q psy12972 933 IALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAF-KHR 1011 (1578)
Q Consensus 933 l~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~a~-~~~ 1011 (1578)
+++|++|... .+.|.+++++|++|+.+.+.+++..+.+.++...+.... ...+++.|..........+..++ .++
T Consensus 110 ~~~~~~g~~~-~y~g~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~f~~~a~~~~ 185 (477)
T PTZ00102 110 IKFFNKGNPV-NYSGGRTADGIVSWIKKLTGPAVTEVESASEIKLIAKKI---FVAFYGEYTSKDSELYKKFEEVADKHR 185 (477)
T ss_pred EEEEECCceE-EecCCCCHHHHHHHHHHhhCCCceeecCHHHHHHhhccC---cEEEEEEeccCCcHHHHHHHHHHHhcc
Confidence 9999999877 556999999999999999887765555555555554443 55666777766666666665544 566
Q ss_pred CCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhhcCCCCCCcccCchhhhhhcC
Q psy12972 1012 TTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVC 1091 (1578)
Q Consensus 1012 ~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~nk~p~vpeLts~~~~~~~c 1091 (1578)
+...|+.+. +. ..+.+++|+.+.+.... ....+...|.+||..+.+|.+.+++..++....-
T Consensus 186 ~~~~F~~~~-----~~----------~~~~~~~~~~~~~~~~~---~~~~~~~~l~~fI~~~~~P~~~~~~~~~~~~~~~ 247 (477)
T PTZ00102 186 EHAKFFVKK-----HE----------GKNKIYVLHKDEEGVEL---FMGKTKEELEEFVSTESFPLFAEINAENYRRYIS 247 (477)
T ss_pred ccceEEEEc-----CC----------CCCcEEEEecCCCCccc---CCCCCHHHHHHHHHHcCCCceeecCccchHHHhc
Confidence 667776551 11 12466777554332221 1223667899999999999999999988876653
Q ss_pred CCCceEEEEEecCCcchHHHHHHHHHHHhhccCCCCcEEEEEEecCcchH-HHHhccCCCCCCccccceeEEEEEcCCcc
Q psy12972 1092 PVKKLCVVLFSEDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPE-FVNALTSPEDSSEISLHIAAMWRMDYKKI 1170 (1578)
Q Consensus 1092 ~~~~lcVll~~~~~~~~~~~~~~lr~vA~~~~~~~~~v~F~~vd~~~q~~-~~~~f~~~~~~~~~~~~lp~l~~~n~~~~ 1170 (1578)
.++.++++....++.+...+.++++|++ ++++ +.|+|+|++.... +++.| +. ..+|.++..+.. .
T Consensus 248 --~~~~~~~~~~~~~~~~~~~~~~~~~A~~--~~~~-~~f~~vd~~~~~~~~~~~~-------gi-~~~P~~~i~~~~-~ 313 (477)
T PTZ00102 248 --SGKDLVWFCGTTEDYDKYKSVVRKVARK--LREK-YAFVWLDTEQFGSHAKEHL-------LI-EEFPGLAYQSPA-G 313 (477)
T ss_pred --CCccEEEEecCHHHHHHHHHHHHHHHHh--ccCc-eEEEEEechhcchhHHHhc-------Cc-ccCceEEEEcCC-c
Confidence 2344455554445566788899999999 8887 8999999988776 66666 22 246777766643 4
Q ss_pred eEeeccCCcccccccccccHHHHHHHhhhhhcCCcccccccccccccccchhhh
Q psy12972 1171 KYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTALKEISDEYIQS 1224 (1578)
Q Consensus 1171 kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~~~l~~~~~lp~l~dE~~~~ 1224 (1578)
+|...... ....|.+.|..|++.+++|... |.+.+|..|+
T Consensus 314 ~y~~~~~~------~~~~~~~~l~~Fv~~~~~gk~~--------~~~~se~~p~ 353 (477)
T PTZ00102 314 RYLLPPAK------ESFDSVEALIEFFKDVEAGKVE--------KSIKSEPIPE 353 (477)
T ss_pred ccCCCccc------cccCCHHHHHHHHHHHhCCCCC--------cccccCCCCC
Confidence 66532221 1125789999999999999888 5555665553
|
|
| >KOG0191|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-22 Score=244.98 Aligned_cols=186 Identities=24% Similarity=0.420 Sum_probs=152.8
Q ss_pred ccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeecc-cCccccccCCccccccccccccCccccccccc
Q psy12972 763 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYDL-FGTTDGFSGQDSASRNFHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 763 ~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~~-~~~~~~i~g~~~~~~~~~~i~~~Ptiklf~~~ 840 (1578)
..+++|+|+|||||||||+++.|+|++++..+++. .++.++|..+. +|+.+++.|+ ||+.+|..+
T Consensus 45 ~~~~~~~v~fyapwc~~c~~l~~~~~~~~~~l~~~~~~~~vd~~~~~~~~~~y~i~gf-------------Ptl~~f~~~ 111 (383)
T KOG0191|consen 45 KDDSPWLVEFYAPWCGHCKKLAPTYKKLAKALKGKVKIGAVDCDEHKDLCEKYGIQGF-------------PTLKVFRPG 111 (383)
T ss_pred ccCCceEEEEECCCCcchhhhchHHHHHHHHhcCceEEEEeCchhhHHHHHhcCCccC-------------cEEEEEcCC
Confidence 46789999999999999999999999999999994 56777776655 8888888887 666666655
Q ss_pred c-ccCccC----cccce--------------eE-EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHH
Q psy12972 841 F-NFPFEE----HDISL--------------FH-KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMD 900 (1578)
Q Consensus 841 ~-~~~~~~----~~i~~--------------~~-vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~ 900 (1578)
. ...+.+ ..+.. .. +..++..+|...+.+. +..|+|.||+|||+||+.++|+|++++.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~--~~~~lv~f~aPwc~~ck~l~~~~~~~a~ 189 (383)
T KOG0191|consen 112 KKPIDYSGPRNAESLAEFLIKELEPSVKKLVEGEVFELTKDNFDETVKDS--DADWLVEFYAPWCGHCKKLAPEWEKLAK 189 (383)
T ss_pred CceeeccCcccHHHHHHHHHHhhccccccccCCceEEccccchhhhhhcc--CcceEEEEeccccHHhhhcChHHHHHHH
Confidence 1 112221 11111 12 5678888998877644 7899999999999999999999999999
Q ss_pred HhCC-CceEEEEEECccchhhHhHcCccccCCcEEEEcCCcc-ccccCCCCCHHHHHHHHHhhCCC
Q psy12972 901 ELSP-LGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRT-SFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 901 ~l~~-~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~-~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
.++. ..+.++.+||+.+..+|++++|.+ |||+++|++|.. ..++.|.|+.+.|+.|+.+..+.
T Consensus 190 ~~~~~~~v~~~~~d~~~~~~~~~~~~v~~-~Pt~~~f~~~~~~~~~~~~~R~~~~i~~~v~~~~~~ 254 (383)
T KOG0191|consen 190 LLKSKENVELGKIDATVHKSLASRLEVRG-YPTLKLFPPGEEDIYYYSGLRDSDSIVSFVEKKERR 254 (383)
T ss_pred HhccCcceEEEeeccchHHHHhhhhcccC-CceEEEecCCCcccccccccccHHHHHHHHHhhcCC
Confidence 9974 449999999999999999999997 999999998888 78888999999999999877654
|
|
| >KOG0713|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-20 Score=212.60 Aligned_cols=153 Identities=28% Similarity=0.394 Sum_probs=111.7
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCC-
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQ- 710 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~- 710 (1578)
....+|+|++|||+++||..|||+||||||+++|||||+ +|.|++.|++|+.||+|||||++|+.||.+|..+....+
T Consensus 12 v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~~ 91 (336)
T KOG0713|consen 12 VLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDENK 91 (336)
T ss_pred hhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhccccc
Confidence 455799999999999999999999999999999999998 699999999999999999999999999999987543221
Q ss_pred CCCCcccCCCCCCCcccccccCCCCCCcccccchhhccccccccccccccCCccCccceeccccccccccccchHHHHHH
Q psy12972 711 DSASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKL 790 (1578)
Q Consensus 711 ~~~~~~~~~~~~~~f~~~F~~~Fg~~f~~~~~~~~~k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~wekl 790 (1578)
..++. +.++..|..+|.. ||+.+.-... +.. ...+.|++.++.-.|.||-...++|+..
T Consensus 92 ~~~~g---~~~~~~f~~~f~d-fg~~~~g~~~-------------~e~----~~~g~~V~~~~e~~~~h~y~~~~~e~~r 150 (336)
T KOG0713|consen 92 DGEGG---GGGNDIFSAFFGD-FGVTVGGNPL-------------EEA----LPKGSDVSSDLEKQLEHFYMGNFVEEVR 150 (336)
T ss_pred ccccC---CcccchHHHhhcc-cccccCCCcc-------------cCC----CCCCceEEeehhhchhhhhcccHHHHHh
Confidence 11111 1114455554443 3332211100 001 2467788999999999999999999998
Q ss_pred HHHhcCCCcceeeeee
Q psy12972 791 MDELSPLGVGFFTVHY 806 (1578)
Q Consensus 791 A~~Lk~~~vg~v~~~~ 806 (1578)
.+-......+...|++
T Consensus 151 ~~~v~~~~~g~~~~~~ 166 (336)
T KOG0713|consen 151 EKGVYKPAPGTRKCNC 166 (336)
T ss_pred ccCceeecCcccccCC
Confidence 7766544444444443
|
|
| >COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-20 Score=219.53 Aligned_cols=98 Identities=41% Similarity=0.664 Sum_probs=82.7
Q ss_pred ccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCCC
Q psy12972 635 VSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDSA 713 (1578)
Q Consensus 635 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~~ 713 (1578)
...|||++|||+++||.+|||+|||+||++||||+|+ ++.|+++|++|++||+|||||++|+.||++|..+...++...
T Consensus 2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~gg 81 (371)
T COG0484 2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFGG 81 (371)
T ss_pred CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcCC
Confidence 3679999999999999999999999999999999999 899999999999999999999999999999998754222111
Q ss_pred CcccCCCCCCCcccccccCCC
Q psy12972 714 SRNFHNHMYNPFDDVFSEGFN 734 (1578)
Q Consensus 714 ~~~~~~~~~~~f~~~F~~~Fg 734 (1578)
. +|.+++. +|+|||+++||
T Consensus 82 ~-g~~~fgg-~~~DIF~~~Fg 100 (371)
T COG0484 82 F-GFGGFGG-DFGDIFEDFFG 100 (371)
T ss_pred C-CcCCCCC-CHHHHHHHhhc
Confidence 1 3333333 68899999884
|
|
| >KOG0912|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=1e-17 Score=184.87 Aligned_cols=313 Identities=15% Similarity=0.171 Sum_probs=205.5
Q ss_pred eccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCC----CceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 858 TTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP----LGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 858 Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~----~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+|..|++..+ .....++|-|||+||..++.+.|.|+++|..++. ..+.+|+|||+.+..++.+|.|.. |||+
T Consensus 1 lt~~N~~~il---~s~elvfv~FyAdWCrFSq~L~piF~EAa~~~~~e~P~~kvvwg~VDcd~e~~ia~ky~I~K-yPTl 76 (375)
T KOG0912|consen 1 LTSENIDSIL---DSNELVFVNFYADWCRFSQMLKPIFEEAAAKFKQEFPEGKVVWGKVDCDKEDDIADKYHINK-YPTL 76 (375)
T ss_pred CccccHHHhh---ccceEEeeeeehhhchHHHHHhHHHHHHHHHHHHhCCCcceEEEEcccchhhHHhhhhcccc-Ccee
Confidence 3566777755 4478999999999999999999999999988752 229999999999999999999997 9999
Q ss_pred EEEcCCcccc-ccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEeccCCchHHHHHHHHhh-cC
Q psy12972 934 ALLTDGRTSF-FKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAFK-HR 1011 (1578)
Q Consensus 934 ~lf~~G~~~~-y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~a~~-~~ 1011 (1578)
++|++|.... .|.|.|+.+.|.+||++++..++-+..+-++++..... ....++++|.++.++++..+..++. ++
T Consensus 77 KvfrnG~~~~rEYRg~RsVeaL~efi~kq~s~~i~Ef~sl~~l~n~~~p---~K~~vIgyF~~kdspey~~~~kva~~lr 153 (375)
T KOG0912|consen 77 KVFRNGEMMKREYRGQRSVEALIEFIEKQLSDPINEFESLDQLQNLDIP---SKRTVIGYFPSKDSPEYDNLRKVASLLR 153 (375)
T ss_pred eeeeccchhhhhhccchhHHHHHHHHHHHhccHHHHHHhHHHHHhhhcc---ccceEEEEeccCCCchHHHHHHHHHHHh
Confidence 9999998543 45599999999999999997754444344444444432 2668999999889999888887664 56
Q ss_pred CCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCch-hhhhhhhcCCCCCCcccCchhhhhhc
Q psy12972 1012 TTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVP-TLQDITDNNPYLTLPRISSQSMLDAV 1090 (1578)
Q Consensus 1012 ~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~-~L~~fI~~nk~p~vpeLts~~~~~~~ 1090 (1578)
+.+.|-.-- + ++.....-+ .-.+++|..+...+.. ...++++.. .+..||...-.|++-++|-+|.-+..
T Consensus 154 ~dc~f~V~~-g-----D~~~~~~~~--~~~~~~f~pd~~~~~~-~f~G~~~nf~el~~Wi~dKcvpLVREiTFeN~EELt 224 (375)
T KOG0912|consen 154 DDCVFLVGF-G-----DLLKPHEPP--GKNILVFDPDHSEPNH-EFLGSMTNFDELKQWIQDKCVPLVREITFENAEELT 224 (375)
T ss_pred hccEEEeec-c-----ccccCCCCC--CCceEEeCCCcCCcCc-ccccccccHHHHHHHHHhcchhhhhhhhhccHHHHh
Confidence 777764431 1 111111111 1126667443222221 234555544 68999999999999999988876555
Q ss_pred CCCCceEEEEE-ecCCcchHHHHHHHHH-HHhhccCCCCcEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEEcCC
Q psy12972 1091 CPVKKLCVVLF-SEDSPEHDASRHTLRR-FAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYK 1168 (1578)
Q Consensus 1091 c~~~~lcVll~-~~~~~~~~~~~~~lr~-vA~~~~~~~~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~n~~ 1168 (1578)
. .+..-+|++ .+++.+. ...|.. ++++..-....+.|...|+.....-+.-|..+. .++|++.+..-.
T Consensus 225 E-EGlPflILf~~kdD~~s---~k~F~~aI~ReL~~e~~~in~l~ADG~~f~hpL~HlgKs~------~DLPviaIDsF~ 294 (375)
T KOG0912|consen 225 E-EGLPFLILFRKKDDKES---EKIFKNAIARELDDETLAINFLTADGKVFKHPLRHLGKSP------DDLPVIAIDSFR 294 (375)
T ss_pred h-cCCceEEEEecCCcccH---HHHHHHHHHHHhhhhhhccceeecCcceecchHHHhCCCc------ccCcEEEeeccc
Confidence 4 343344445 3333222 222322 333311112237788888877776666663332 578877665533
Q ss_pred c-ceEeeccCCcccccccccccHHHHHHHhhhhhcCCc
Q psy12972 1169 K-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPY 1205 (1578)
Q Consensus 1169 ~-~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~ 1205 (1578)
. .-|.+..+ -...-.|..|+..+-+|.-
T Consensus 295 Hmylfp~f~d---------i~~pGkLkqFv~DL~sgkl 323 (375)
T KOG0912|consen 295 HMYLFPDFND---------INIPGKLKQFVADLHSGKL 323 (375)
T ss_pred eeeecCchhh---------hcCccHHHHHHHHHhCchh
Confidence 3 33333222 1233467788877766653
|
|
| >PF01216 Calsequestrin: Calsequestrin; InterPro: IPR001393 Calsequestrin is the principal calcium-binding protein present in the sarcoplasmic reticulum of cardiac and skeletal muscle [] | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.5e-16 Score=176.96 Aligned_cols=323 Identities=15% Similarity=0.191 Sum_probs=215.5
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCccccccc------H-HHHHHHHHhCCCceEEEEEECccchhhHhHcCcc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVE------P-IFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVG 927 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~------p-~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~ 927 (1578)
++.||.+||.+.+ ++.+...|.||.|-- ..+... . ..+-+|+.+...+|+||.||..++..+|+++|+.
T Consensus 36 Vi~LneKNfk~~l---Kkyd~l~l~yh~p~~-~dk~~qkq~~m~E~~LELaAQVlE~~gigfg~VD~~Kd~klAKKLgv~ 111 (383)
T PF01216_consen 36 VIDLNEKNFKRAL---KKYDVLVLYYHEPVE-SDKVSQKQFQMTELVLELAAQVLEDKGIGFGMVDSKKDAKLAKKLGVE 111 (383)
T ss_dssp CEEE-TTTHHHHH---HH-SEEEEEEE--ST-SSHHHHHHHHHHHHHHHHHHHHCGGCTEEEEEEETTTTHHHHHHHT--
T ss_pred eEEcchhHHHHHH---HhhcEEEEEEecCCc-cCHHHHHHHHHHHHHHHHHHHhccccCcceEEeccHHHHHHHHhcCcc
Confidence 5689999999976 446788888888863 333221 2 3455567777788999999999999999999999
Q ss_pred ccCCcEEEEcCCccccccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEeccCCchHHHHHHHH
Q psy12972 928 SQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINA 1007 (1578)
Q Consensus 928 ~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~a 1007 (1578)
. .++|.+|++|+.+.|. |.++++-|+.|+...+..++..+.+..+++.|-.-. +...++++|....+..+..+..|
T Consensus 112 E-~~SiyVfkd~~~IEyd-G~~saDtLVeFl~dl~edPVeiIn~~~e~~~Fe~ie--d~~klIGyFk~~~s~~yk~FeeA 187 (383)
T PF01216_consen 112 E-EGSIYVFKDGEVIEYD-GERSADTLVEFLLDLLEDPVEIINNKHELKAFERIE--DDIKLIGYFKSEDSEHYKEFEEA 187 (383)
T ss_dssp S-TTEEEEEETTEEEEE--S--SHHHHHHHHHHHHSSSEEEE-SHHHHHHHHH----SS-EEEEE-SSTTSHHHHHHHHH
T ss_pred c-cCcEEEEECCcEEEec-CccCHHHHHHHHHHhcccchhhhcChhhhhhhhhcc--cceeEEEEeCCCCcHHHHHHHHH
Confidence 7 9999999999999887 999999999999999987754554555666666532 35678888988888888887776
Q ss_pred h-hcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhhcCCCCCCcccCchhh
Q psy12972 1008 F-KHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSM 1086 (1578)
Q Consensus 1008 ~-~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~nk~p~vpeLts~~~ 1086 (1578)
+ .+...+.|+-+ .++.++++.+++ .-.+-.|....+.|...- ....+...+.+||..|+-|++-+|+..++
T Consensus 188 Ae~F~p~IkFfAt-----fd~~vAk~L~lK--~nev~fyepF~~~pi~ip-~~p~~e~e~~~fi~~h~rptlrkl~~~~m 259 (383)
T PF01216_consen 188 AEHFQPYIKFFAT-----FDKKVAKKLGLK--LNEVDFYEPFMDEPITIP-GKPYTEEELVEFIEEHKRPTLRKLRPEDM 259 (383)
T ss_dssp HHHCTTTSEEEEE------SHHHHHHHT-S--TT-EEEE-TTSSSEEEES-SSS--HHHHHHHHHHT-S-SEEE--GGGH
T ss_pred HHhhcCceeEEEE-----ecchhhhhcCcc--ccceeeeccccCCCccCC-CCCCCHHHHHHHHHHhchhHhhhCChhhh
Confidence 6 68899999888 789999999996 346777766666665532 23345567999999999999999999999
Q ss_pred hhhcCC-CCceEEEEEec-CCcchHHHHHHHHHHHhhccCCCC-cEEEEEEecCcch----HHHHhccCCCCCCccccce
Q psy12972 1087 LDAVCP-VKKLCVVLFSE-DSPEHDASRHTLRRFAQESRFVHN-NIAFMYVFIEKQP----EFVNALTSPEDSSEISLHI 1159 (1578)
Q Consensus 1087 ~~~~c~-~~~lcVll~~~-~~~~~~~~~~~lr~vA~~~~~~~~-~v~F~~vd~~~q~----~~~~~f~~~~~~~~~~~~l 1159 (1578)
++.-.. .....+++|+. ++++.-+..+.|+++|+. ++.+ .+.++|||-+..+ -|.+.|.. ++ .-
T Consensus 260 ~e~Wedd~~g~hIvaFaee~dpdG~efleilk~va~~--nt~np~LsivwIDPD~fPllv~yWE~tF~I-----dl--~~ 330 (383)
T PF01216_consen 260 FETWEDDIDGIHIVAFAEEEDPDGFEFLEILKQVARD--NTDNPDLSIVWIDPDDFPLLVPYWEKTFGI-----DL--SR 330 (383)
T ss_dssp HHHHHSSSSSEEEEEE--TTSHHHHHHHHHHHHHHHH--CTT-TT--EEEE-GGG-HHHHHHHHHHHTT------T--TS
T ss_pred hhhhcccCCCceEEEEecCCCCchHHHHHHHHHHHHh--cCcCCceeEEEECCCCCchhHHHHHhhcCc-----cc--cC
Confidence 887632 33667777764 456667889999999999 6654 5999999998776 45566621 22 22
Q ss_pred eEEEEEcCCcceEeeccCCcccccccccccHHHHHHHhhhhhcCCcc
Q psy12972 1160 AAMWRMDYKKIKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 1206 (1578)
Q Consensus 1160 p~l~~~n~~~~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~~ 1206 (1578)
|.+=+.|.+...=.|++-+ ...-.-|.+.|+..++.+++|+..
T Consensus 331 PqIGvVnvtdadsvW~dm~----d~~d~pt~~~LedWieDVlsg~i~ 373 (383)
T PF01216_consen 331 PQIGVVNVTDADSVWMDMD----DDDDLPTAEELEDWIEDVLSGKIN 373 (383)
T ss_dssp -EEEEEETTTSEEEEC-ST----TTSS---HHHHHHHHHHHHCTCCT
T ss_pred CceeEEeccccccchhccC----CcccCCcHHHHHHHHHHHhcCCCC
Confidence 4444445554444454432 111123778899999999999886
|
It is a highly acidic protein that is able to bind over 40 calcium ions and acts as an internal calcium store in muscle. Sequence analysis has suggested that calcium is not bound in distinct pockets via EF-hand motifs, but rather via presentation of a charged protein surface. Two forms of calsequestrin have been identified. The cardiac form is present in cardiac and slow skeletal muscle and the fast skeletal form is found in fast skeletal muscle. The release of calsequestrin-bound calcium (through a a calcium release channel) triggers muscle contraction. The active protein is not highly structured, more than 50% of it adopting a random coil conformation []. When calcium binds there is a structural change whereby the alpha-helical content of the protein increases from 3 to 11% []. Both forms of calsequestrin are phosphorylated by casein kinase II, but the cardiac form is phosphorylated more rapidly and to a higher degree [].; GO: 0005509 calcium ion binding; PDB: 1SJI_B 2VAF_A 3UOM_C 1A8Y_A 3TRQ_A 3TRP_A 3US3_A. |
| >PTZ00102 disulphide isomerase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.1e-16 Score=197.49 Aligned_cols=396 Identities=12% Similarity=0.077 Sum_probs=233.6
Q ss_pred ccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCC--cce--eeeeecc-cCccccccCCccc
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG--VGF--FTVHYDL-FGTTDGFSGQDSA 821 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~--vg~--v~~~~~~-~~~~~~i~g~~~~ 821 (1578)
...++..+|+..+. .++.+||.||||||+||++++|+|+++|+.+++.. +.+ ++|..+. +|+..++.+
T Consensus 34 v~~l~~~~f~~~i~---~~~~~lv~f~a~wC~~Ck~~~p~~~~~a~~~~~~~~~i~~~~vd~~~~~~l~~~~~i~~---- 106 (477)
T PTZ00102 34 VTVLTDSTFDKFIT---ENEIVLVKFYAPWCGHCKRLAPEYKKAAKMLKEKKSEIVLASVDATEEMELAQEFGVRG---- 106 (477)
T ss_pred cEEcchhhHHHHHh---cCCcEEEEEECCCCHHHHHhhHHHHHHHHHHHhcCCcEEEEEEECCCCHHHHHhcCCCc----
Confidence 34566667877662 45789999999999999999999999999997542 333 3332211 444444444
Q ss_pred cccccccccCccccccccccccCccC----ccccee-------EEEeeccccccceecccCCCCcEEEEEEcCCCccccc
Q psy12972 822 SRNFHNHMYNPFDDVFSEGFNFPFEE----HDISLF-------HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQ 890 (1578)
Q Consensus 822 ~~~~~~i~~~Ptiklf~~~~~~~~~~----~~i~~~-------~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~ 890 (1578)
+||+.+|..+....+.+ ..+..+ .+..++...-.... .+...+.++.++. .....
T Consensus 107 ---------~Pt~~~~~~g~~~~y~g~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~---~~~~~ 172 (477)
T PTZ00102 107 ---------YPTIKFFNKGNPVNYSGGRTADGIVSWIKKLTGPAVTEVESASEIKLI--AKKIFVAFYGEYT---SKDSE 172 (477)
T ss_pred ---------ccEEEEEECCceEEecCCCCHHHHHHHHHHhhCCCceeecCHHHHHHh--hccCcEEEEEEec---cCCcH
Confidence 48888888664323333 222221 11233322211111 1223344444443 33456
Q ss_pred ccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCC-ccccccCCCCCHHHHHHHHHhhCCCccccc
Q psy12972 891 VEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDG-RTSFFKEPSFSVQKMVEFFRLKLPYKLIVP 969 (1578)
Q Consensus 891 l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G-~~~~y~~G~~s~~~L~~fi~~~lp~~vv~~ 969 (1578)
....|.++|..+++. ..|+.+. +. . .|.+.+++.. ....++.| .+.++|.+||....-| .+..
T Consensus 173 ~~~~f~~~a~~~~~~-~~F~~~~-----------~~-~-~~~~~~~~~~~~~~~~~~~-~~~~~l~~fI~~~~~P-~~~~ 236 (477)
T PTZ00102 173 LYKKFEEVADKHREH-AKFFVKK-----------HE-G-KNKIYVLHKDEEGVELFMG-KTKEELEEFVSTESFP-LFAE 236 (477)
T ss_pred HHHHHHHHHHhcccc-ceEEEEc-----------CC-C-CCcEEEEecCCCCcccCCC-CCHHHHHHHHHHcCCC-ceee
Confidence 677889999998765 5665432 11 2 4667777553 34444434 5889999999876543 4777
Q ss_pred cccccHHHHhhcccCCCcEEEEEeccCCc--hHH-HHHHHHhhcCCCeEEEEEEcccCCCh-hHHhhcCCCCCCcEEEEe
Q psy12972 970 LSATNVDAFLDNWREDNKVHALLFQRSLP--VRL-RYLINAFKHRTTIVFGVIVYDQEDSS-SVFQRFKVPGDKDSLLIF 1045 (1578)
Q Consensus 970 it~~~~~~fl~~~~~~~~~~VlfF~~~~~--~~~-~~~~~a~~~~~~v~Fg~v~~~~~~~~-~l~~kf~V~~~~Ptllvf 1045 (1578)
++.+++..+..+ +.+++.++..... ... .+...|.++++++.|++++.+ ... .+.+.+++.. .|++++.
T Consensus 237 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~f~~vd~~--~~~~~~~~~~gi~~-~P~~~i~ 309 (477)
T PTZ00102 237 INAENYRRYISS----GKDLVWFCGTTEDYDKYKSVVRKVARKLREKYAFVWLDTE--QFGSHAKEHLLIEE-FPGLAYQ 309 (477)
T ss_pred cCccchHHHhcC----CccEEEEecCHHHHHHHHHHHHHHHHhccCceEEEEEech--hcchhHHHhcCccc-CceEEEE
Confidence 888888887765 3445544432221 112 222345578888999888554 333 3788999987 5787766
Q ss_pred ccCCCCCccccccCCCCchhhhhhhhcCC------------CC-----CCcccCchhhhhhcCCCCceEEEEE-ecCCcc
Q psy12972 1046 KEDKDRPSASITMNSIPVPTLQDITDNNP------------YL-----TLPRISSQSMLDAVCPVKKLCVVLF-SEDSPE 1107 (1578)
Q Consensus 1046 k~~~~~~~~~l~~~~l~~~~L~~fI~~nk------------~p-----~vpeLts~~~~~~~c~~~~lcVll~-~~~~~~ 1107 (1578)
..........-....++...|..|++.-. .| .+..++..++.+.+-..++.++|.+ .+-...
T Consensus 310 ~~~~~y~~~~~~~~~~~~~~l~~Fv~~~~~gk~~~~~~se~~p~~~~~~v~~l~~~~f~~~v~~~~k~vlv~f~a~wC~~ 389 (477)
T PTZ00102 310 SPAGRYLLPPAKESFDSVEALIEFFKDVEAGKVEKSIKSEPIPEEQDGPVKVVVGNTFEEIVFKSDKDVLLEIYAPWCGH 389 (477)
T ss_pred cCCcccCCCccccccCCHHHHHHHHHHHhCCCCCcccccCCCCCCCCCCeEEecccchHHHHhcCCCCEEEEEECCCCHH
Confidence 42211110000011235567777766321 11 1333555555555333445555555 455566
Q ss_pred hHHHHHHHHHHHhhccCCC-CcEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEEcCCcceEeeccCCcccccccc
Q psy12972 1108 HDASRHTLRRFAQESRFVH-NNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKKIKYGWLLGDAVDDWKDY 1186 (1578)
Q Consensus 1108 ~~~~~~~lr~vA~~~~~~~-~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~n~~~~kY~~l~~~~~~~~~~~ 1186 (1578)
+......+.++|+. +++ ..+.|+++|.+.....+..+ +. ..+|.++..+..+..-..+.|.
T Consensus 390 C~~~~p~~~~~a~~--~~~~~~v~~~~id~~~~~~~~~~~-------~v-~~~Pt~~~~~~~~~~~~~~~G~-------- 451 (477)
T PTZ00102 390 CKNLEPVYNELGEK--YKDNDSIIVAKMNGTANETPLEEF-------SW-SAFPTILFVKAGERTPIPYEGE-------- 451 (477)
T ss_pred HHHHHHHHHHHHHH--hccCCcEEEEEEECCCCccchhcC-------CC-cccCeEEEEECCCcceeEecCc--------
Confidence 77788899999988 654 35899999998766665555 22 4788887777554321123443
Q ss_pred cccHHHHHHHhhhhhcCCc
Q psy12972 1187 NTTKDRLDAGLRSLVNDPY 1205 (1578)
Q Consensus 1187 ~~t~e~l~~fL~~ll~g~~ 1205 (1578)
.+.+.+..+|+.......
T Consensus 452 -~~~~~l~~~i~~~~~~~~ 469 (477)
T PTZ00102 452 -RTVEGFKEFVNKHATNPF 469 (477)
T ss_pred -CCHHHHHHHHHHcCCCCc
Confidence 467889999998876543
|
|
| >KOG4277|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.6e-17 Score=179.05 Aligned_cols=284 Identities=14% Similarity=0.192 Sum_probs=154.4
Q ss_pred cccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecccCccccccCCccccccccccccCcccccc
Q psy12972 758 NYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDLFGTTDGFSGQDSASRNFHNHMYNPFDDVF 837 (1578)
Q Consensus 758 ~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~~~~~~~i~g~~~~~~~~~~i~~~Ptiklf 837 (1578)
.......++.|||+||||||+|||+|.|.|.++..+|++.+..+-..+.+ |++-...+ +..++.+|||+++|
T Consensus 36 kFkdnkdddiW~VdFYAPWC~HCKkLePiWdeVG~elkdig~PikVGKlD------aT~f~aiA--nefgiqGYPTIk~~ 107 (468)
T KOG4277|consen 36 KFKDNKDDDIWFVDFYAPWCAHCKKLEPIWDEVGHELKDIGLPIKVGKLD------ATRFPAIA--NEFGIQGYPTIKFF 107 (468)
T ss_pred HhhhcccCCeEEEEeechhhhhcccccchhHHhCcchhhcCCceeecccc------cccchhhH--hhhccCCCceEEEe
Confidence 33344578899999999999999999999999999999887655333333 32211111 11344555999999
Q ss_pred ccccc----cCccCcccceeEE------E-eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCc
Q psy12972 838 SEGFN----FPFEEHDISLFHK------L-STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG 906 (1578)
Q Consensus 838 ~~~~~----~~~~~~~i~~~~v------i-~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~ 906 (1578)
+.+.. ++++.+++..|.. + .++.++....-+ ...++|.+|+|-... + .+...|.++|.+.
T Consensus 108 kgd~a~dYRG~R~Kd~iieFAhR~a~aiI~pi~enQ~~fehl-q~Rhq~ffVf~Gtge-~---PL~d~fidAASe~---- 178 (468)
T KOG4277|consen 108 KGDHAIDYRGGREKDAIIEFAHRCAAAIIEPINENQIEFEHL-QARHQPFFVFFGTGE-G---PLFDAFIDAASEK---- 178 (468)
T ss_pred cCCeeeecCCCccHHHHHHHHHhcccceeeecChhHHHHHHH-hhccCceEEEEeCCC-C---cHHHHHHHHhhhh----
Confidence 97644 4444444444421 2 333333222111 245789999887543 1 2233455555443
Q ss_pred eEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHHHHHH-hhCCCccccccccccHHHHhhcccCC
Q psy12972 907 VGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFR-LKLPYKLIVPLSATNVDAFLDNWRED 985 (1578)
Q Consensus 907 v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~-~~lp~~vv~~it~~~~~~fl~~~~~~ 985 (1578)
+.++..-...+.-....-..+. .|.+.+|++.....+.+| +.++|.+|+. ...|. ....+.-.+.++-.+
T Consensus 179 ~~~a~FfSaseeVaPe~~~~ke-mpaV~VFKDetf~i~de~--dd~dLseWinRERf~~--fLa~dgflL~EiG~s---- 249 (468)
T KOG4277|consen 179 FSVARFFSASEEVAPEENDAKE-MPAVAVFKDETFEIEDEG--DDEDLSEWINRERFPG--FLAADGFLLAEIGAS---- 249 (468)
T ss_pred eeeeeeeccccccCCcccchhh-ccceEEEccceeEEEecC--chhHHHHHHhHhhccc--hhhcccchHHHhCcC----
Confidence 5666654433322223334454 799999999866666555 5679999995 45554 222222333333333
Q ss_pred CcEEEEEe-ccC----C-chHHHHHHHH---h-------hcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCC
Q psy12972 986 NKVHALLF-QRS----L-PVRLRYLINA---F-------KHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDK 1049 (1578)
Q Consensus 986 ~~~~VlfF-~~~----~-~~~~~~~~~a---~-------~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~ 1049 (1578)
.+.+++.. +++ . .+..++...+ + .+..+..|++.+.+.-.+.-++. .+ ..|++++|+...
T Consensus 250 GKLVaLaVidEkhk~nns~eh~~~~ki~eEaakd~Rd~pdfh~dFQF~hlDGnD~~nqilM~--al--s~P~l~i~Ntsn 325 (468)
T KOG4277|consen 250 GKLVALAVIDEKHKFNNSSEHREFHKIAEEAAKDLRDHPDFHNDFQFAHLDGNDLANQILMA--AL--SEPHLFIFNTSN 325 (468)
T ss_pred CceEEEEEeccccccCCcchhHHHHHHHHHHHHHHHhChhhhhhceeeccchhHHHHHHHHH--hh--cCCeEEEEecCc
Confidence 44444444 222 2 2222222211 1 23456888888433322332222 23 248999996543
Q ss_pred CCCccccccCC---CCchhhhhhhhcC
Q psy12972 1050 DRPSASITMNS---IPVPTLQDITDNN 1073 (1578)
Q Consensus 1050 ~~~~~~l~~~~---l~~~~L~~fI~~n 1073 (1578)
.. .+++..+ .+...|..||++.
T Consensus 326 qe--YfLse~d~qikniedilqFient 350 (468)
T KOG4277|consen 326 QE--YFLSEDDPQIKNIEDILQFIENT 350 (468)
T ss_pred hh--eeeccCChhhhhHHHHHHHHhcc
Confidence 22 2333222 2233455666554
|
|
| >cd03006 PDI_a_EFP1_N PDIa family, N-terminal EFP1 subfamily; EFP1 is a binding partner protein of thyroid oxidase (ThOX), also called Duox | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.7e-17 Score=165.43 Aligned_cols=102 Identities=17% Similarity=0.214 Sum_probs=91.3
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhH-hHcCccccCCcE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLA-RRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~-~k~gV~~~~PTl 933 (1578)
+++++++||++.+.-.+.+++++|.||||||++|+.+.|.|+++|+.+++. +.|++|||+++.++| ++|+|.+ +|||
T Consensus 11 v~~l~~~~f~~~~~v~~~~~~vlV~FyA~WC~~Ck~l~p~~~~la~~~~~~-v~~~~Vd~d~~~~l~~~~~~I~~-~PTl 88 (113)
T cd03006 11 VLDFYKGQLDYAEELRTDAEVSLVMYYAPWDAQSQAARQEFEQVAQKLSDQ-VLFVAINCWWPQGKCRKQKHFFY-FPVI 88 (113)
T ss_pred eEEechhhhHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEEEEECCCChHHHHHhcCCcc-cCEE
Confidence 678999999986332356899999999999999999999999999999876 999999999999999 5899998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHH
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi 958 (1578)
++|++|+....+.|.++++.|+.|+
T Consensus 89 ~lf~~g~~~~~y~G~~~~~~i~~~~ 113 (113)
T cd03006 89 HLYYRSRGPIEYKGPMRAPYMEKFV 113 (113)
T ss_pred EEEECCccceEEeCCCCHHHHHhhC
Confidence 9999998766677999999999874
|
ThOX proteins are responsible for the generation of hydrogen peroxide, a crucial substrate of thyroperoxidase, which functions to iodinate thyroglobulin and synthesize thyroid hormones. EFP1 was isolated through a yeast two-hybrid method using the EF-hand fragment of dog Duox1 as a bait. It could be one of the partners in the assembly of a multiprotein complex constituting the thyroid hydrogen peroxide generating system. EFP1 contains two TRX domains related to the redox active TRX domains of protein disulfide isomerase (PDI). This subfamily is composed of the N-terminal TRX domain of EFP1, which contains a CXXS sequence in place of the typical CXXC motif, similar to ERp44. The CXXS motif allows the formation of stable mixed disulfides, crucial for the ER-retention function of ERp44. |
| >TIGR01130 ER_PDI_fam protein disulfide isomerases, eukaryotic | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.2e-15 Score=187.26 Aligned_cols=402 Identities=15% Similarity=0.157 Sum_probs=242.4
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCC--cceeeeeecc---cCccccccCCcccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG--VGFFTVHYDL---FGTTDGFSGQDSAS 822 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~--vg~v~~~~~~---~~~~~~i~g~~~~~ 822 (1578)
+.++..||+..+. .+++++|.||||||+||+++.|.|.++|+.+++.+ +.++.++++. +|+..++.+
T Consensus 4 ~~l~~~~~~~~i~---~~~~~~v~f~a~wC~~c~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~----- 75 (462)
T TIGR01130 4 LVLTKDNFDDFIK---SHEFVLVEFYAPWCGHCKSLAPEYEKAADELKKKGPPIKLAKVDATEEKDLAQKYGVSG----- 75 (462)
T ss_pred eECCHHHHHHHHh---cCCCEEEEEECCCCHHHHhhhHHHHHHHHHHhhcCCceEEEEEECCCcHHHHHhCCCcc-----
Confidence 4566778887773 46789999999999999999999999999998653 4443333222 444444444
Q ss_pred ccccccccCccccccccccc--cCccC----ccccee-------EEEeec-cccccceecccCCCCcEEEEEEcCCCccc
Q psy12972 823 RNFHNHMYNPFDDVFSEGFN--FPFEE----HDISLF-------HKLSTT-HWNFEKNYIPKSYTTPHLILFYSDWCFAC 888 (1578)
Q Consensus 823 ~~~~~i~~~Ptiklf~~~~~--~~~~~----~~i~~~-------~vi~Lt-~~nF~~~vl~~s~~~~~LV~FyapwCg~C 888 (1578)
+||+.+|..|-. ..+.+ ..+..+ .+..++ .++++..+ +.+.+.+|.|+..- -
T Consensus 76 --------~Pt~~~~~~g~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~---~~~~~~vi~~~~~~---~ 141 (462)
T TIGR01130 76 --------YPTLKIFRNGEDSVSDYNGPRDADGIVKYMKKQSGPAVKEIETVADLEAFL---ADDDVVVIGFFKDL---D 141 (462)
T ss_pred --------ccEEEEEeCCccceeEecCCCCHHHHHHHHHHhcCCCceeecCHHHHHHHH---hcCCcEEEEEECCC---C
Confidence 488888886543 33333 111111 112343 45555544 33677788787552 1
Q ss_pred ccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCc---cccccCCCC--CHHHHHHHHHhhCC
Q psy12972 889 LQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGR---TSFFKEPSF--SVQKMVEFFRLKLP 963 (1578)
Q Consensus 889 k~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~---~~~y~~G~~--s~~~L~~fi~~~lp 963 (1578)
......|.++|..+... ..+ +-+..+..+++++++.. |++.+|+... ....+.|.. +.++|.+|+....-
T Consensus 142 ~~~~~~~~~~a~~~~~~-~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~fi~~~~~ 216 (462)
T TIGR01130 142 SELNDTFLSVAEKLRDV-YFF--FAHSSDVAAFAKLGAFP--DSVVLFKPKDEDEKFSKVDGEMDTDVSDLEKFIRAESL 216 (462)
T ss_pred cHHHHHHHHHHHHhhhc-cce--EEecCCHHHHhhcCCCC--CcEEEecccccccccccccCcccCCHHHHHHHHHHcCC
Confidence 35667899999988765 332 22334557788888754 7777774322 212334544 56899999987653
Q ss_pred CccccccccccHHHHhhcccCCCcEEEEEeccCCch---H-H-HHHHHHhhcCC-CeEEEEEEcccCCChhHHhhcCCCC
Q psy12972 964 YKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPV---R-L-RYLINAFKHRT-TIVFGVIVYDQEDSSSVFQRFKVPG 1037 (1578)
Q Consensus 964 ~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~---~-~-~~~~~a~~~~~-~v~Fg~v~~~~~~~~~l~~kf~V~~ 1037 (1578)
| .+..++.+++..+.++. ...+++++.+.... . . .+...|.++++ .+.|++++ ......+++.+++..
T Consensus 217 p-~v~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~f~~~d--~~~~~~~~~~~~~~~ 290 (462)
T TIGR01130 217 P-LVGEFTQETAAKYFESG---PLVVLYYNVDESLDPFEELRNRFLEAAKKFRGKFVNFAVAD--EEDFGRELEYFGLKA 290 (462)
T ss_pred C-ceEeeCCcchhhHhCCC---CceeEEEEecCCchHHHHHHHHHHHHHHHCCCCeEEEEEec--HHHhHHHHHHcCCCc
Confidence 3 47777888888877653 33333333332321 1 1 22223446664 78888874 335677899999983
Q ss_pred -CCcEEEEeccCCCCCcccccc-CCCCchhhhhhhhcCCC-----------------CCCcccCchhhhhhcCCCCceEE
Q psy12972 1038 -DKDSLLIFKEDKDRPSASITM-NSIPVPTLQDITDNNPY-----------------LTLPRISSQSMLDAVCPVKKLCV 1098 (1578)
Q Consensus 1038 -~~Ptllvfk~~~~~~~~~l~~-~~l~~~~L~~fI~~nk~-----------------p~vpeLts~~~~~~~c~~~~lcV 1098 (1578)
..|++++++.+. ...+... +.++...|.+|++.-.- ..+..++..++.+.+-..++..+
T Consensus 291 ~~~P~~vi~~~~~--~~~y~~~~~~~~~~~i~~fi~~~~~g~~~~~~~se~~p~~~~~~v~~l~~~~f~~~v~~~~~~vl 368 (462)
T TIGR01130 291 EKFPAVAIQDLEG--NKKYPMDQEEFSSENLEAFVKDFLDGKLKPYLKSEPIPEDDEGPVKVLVGKNFDEIVLDETKDVL 368 (462)
T ss_pred cCCceEEEEeCCc--ccccCCCcCCCCHHHHHHHHHHHhcCCCCeeeccCCCCccCCCccEEeeCcCHHHHhccCCCeEE
Confidence 478999985443 1112212 24566678888775311 12334555555554433345555
Q ss_pred EEE-ecCCcchHHHHHHHHHHHhhccCCC-C-cEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEEcCCcc-eEee
Q psy12972 1099 VLF-SEDSPEHDASRHTLRRFAQESRFVH-N-NIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKKI-KYGW 1174 (1578)
Q Consensus 1099 ll~-~~~~~~~~~~~~~lr~vA~~~~~~~-~-~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~n~~~~-kY~~ 1174 (1578)
|.+ .+....+......+.++|+. +.+ + .+.|+.+|.+.. +... + .. ..+|.+......+. .-..
T Consensus 369 v~f~a~wC~~C~~~~p~~~~~~~~--~~~~~~~i~~~~id~~~n-~~~~-~-------~i-~~~Pt~~~~~~~~~~~~~~ 436 (462)
T TIGR01130 369 VEFYAPWCGHCKNLAPIYEELAEK--YKDAESDVVIAKMDATAN-DVPP-F-------EV-EGFPTIKFVPAGKKSEPVP 436 (462)
T ss_pred EEEECCCCHhHHHHHHHHHHHHHH--hhcCCCcEEEEEEECCCC-ccCC-C-------Cc-cccCEEEEEeCCCCcCceE
Confidence 555 45556677788899999999 666 2 599999998653 2222 2 11 56787777764432 1111
Q ss_pred ccCCcccccccccccHHHHHHHhhhhhcCCc
Q psy12972 1175 LLGDAVDDWKDYNTTKDRLDAGLRSLVNDPY 1205 (1578)
Q Consensus 1175 l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~ 1205 (1578)
..| ..+.+.|..+|++..+.+.
T Consensus 437 ~~g---------~~~~~~l~~~l~~~~~~~~ 458 (462)
T TIGR01130 437 YDG---------DRTLEDFSKFIAKHATFPL 458 (462)
T ss_pred ecC---------cCCHHHHHHHHHhcCCCCC
Confidence 232 2467788888887765543
|
Members of this family have at least two protein-disulfide domains, each similar to thioredoxin but with the redox-active disulfide in the motif PWCGHCK, and an ER retention signal at the extreme C-terminus (KDEL, HDEL, and similar motifs). |
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.1e-16 Score=170.28 Aligned_cols=157 Identities=22% Similarity=0.193 Sum_probs=104.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
..||+||+|+||+|+..+|++||||+++++.......| ..+....++ ...+...+...++.++. ..|++
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~E~~ 71 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRD-RYVSGEFRF-RHGYCKSNPRKMVRTWA---------EKEMR 71 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHH-HhhcCCchh-hccccCCCHHHHHHHHH---------HHHHH
Confidence 57999999999999988999999999999754322212 111101111 01122334444443332 57999
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHH-HHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQI-FQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i-~~~G~vH~D 565 (1578)
|+.++.. +.+.+|.++ .+...+|||||++|..+.... +...+++.+.+...+.++. +.++ |..|++|+|
T Consensus 72 ~l~~l~~-----~~v~~p~~~--~~~~~~iVmE~i~g~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrD 143 (190)
T cd05147 72 NLKRLVT-----AGIPCPEPI--LLKSHVLVMEFIGDDGWAAPR-LKDAPLSESKARELYLQVIQIMRILYQDCRLVHAD 143 (190)
T ss_pred HHHHHHH-----CCCCCCcEE--EecCCEEEEEEeCCCCCcchh-hhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 9999964 245567666 345669999999997654331 3345677776666665533 6677 699999999
Q ss_pred CCCCCCCCC--eeEEecCCch
Q psy12972 566 PHSGNDVNT--WLYPVDLGDK 584 (1578)
Q Consensus 566 pHPGNilv~--~v~liDfG~~ 584 (1578)
|||+|||+. .+++||||..
T Consensus 144 lkP~NIli~~~~v~LiDFG~a 164 (190)
T cd05147 144 LSEYNLLYHDGKLYIIDVSQS 164 (190)
T ss_pred CCHHHEEEECCcEEEEEcccc
Confidence 999999974 5788888854
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >cd03003 PDI_a_ERdj5_N PDIa family, N-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.2e-16 Score=155.99 Aligned_cols=99 Identities=19% Similarity=0.347 Sum_probs=90.5
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++++|.++|++.+ ..+++++|.||+|||++|+.+.|.|+++|+.+++. +.|++|||++++.+|++++|++ +||++
T Consensus 3 ~~~l~~~~f~~~v---~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~-~~~~~vd~~~~~~~~~~~~v~~-~Pt~~ 77 (101)
T cd03003 3 IVTLDRGDFDAAV---NSGEIWFVNFYSPRCSHCHDLAPTWREFAKEMDGV-IRIGAVNCGDDRMLCRSQGVNS-YPSLY 77 (101)
T ss_pred eEEcCHhhHHHHh---cCCCeEEEEEECCCChHHHHhHHHHHHHHHHhcCc-eEEEEEeCCccHHHHHHcCCCc-cCEEE
Confidence 4578999999977 33589999999999999999999999999999876 9999999999999999999997 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHH
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi 958 (1578)
+|++|+....+.|.++.++|.+|+
T Consensus 78 ~~~~g~~~~~~~G~~~~~~l~~f~ 101 (101)
T cd03003 78 VFPSGMNPEKYYGDRSKESLVKFA 101 (101)
T ss_pred EEcCCCCcccCCCCCCHHHHHhhC
Confidence 999998877788999999999874
|
This subfamily is comprised of the first TRX domain of ERdj5 located after the DnaJ domain at the N-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation. |
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.3e-16 Score=170.25 Aligned_cols=157 Identities=21% Similarity=0.188 Sum_probs=99.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.|||+||+||||+|+..+|+.||||+.+|+.... ..+...+....++... ....+...++.+ .+..|++
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~E~~ 71 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSF-KDRDKYIEGDPRFRSR-YSKSNPRKLVFA---------WAEKEFR 71 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceE-eeHHHHhcCCcccccc-cccCCHHHHHHH---------HHHHHHH
Confidence 5899999999999998899999999999985421 1111111100000000 000122222222 2468999
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~vH~D 565 (1578)
|+.++.. +.+.+|.++. +...+|||||++|..+... .+....++..++...+.++. +..+|. .|++|+|
T Consensus 72 ~l~~l~~-----~~i~~p~~~~--~~~~~lVmE~~~g~~~~~~-~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrD 143 (190)
T cd05145 72 NLKRLYE-----AGVPVPEPIL--LKKNVLVMEFIGDDGSPAP-RLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGD 143 (190)
T ss_pred HHHHHHh-----CCCCCceEEE--ecCCEEEEEEecCCCchhh-hhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence 9999874 4577888875 3467999999999854332 13344555544444333333 566777 9999999
Q ss_pred CCCCCCCCC--eeEEecCCch
Q psy12972 566 PHSGNDVNT--WLYPVDLGDK 584 (1578)
Q Consensus 566 pHPGNilv~--~v~liDfG~~ 584 (1578)
|||+|||+. .++++|||..
T Consensus 144 lkP~NIll~~~~~~liDFG~a 164 (190)
T cd05145 144 LSEYNILYHDGKPYIIDVSQA 164 (190)
T ss_pred CChhhEEEECCCEEEEEcccc
Confidence 999999963 4667777754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG0712|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.9e-16 Score=178.08 Aligned_cols=69 Identities=45% Similarity=0.802 Sum_probs=65.1
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDG 706 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~ 706 (1578)
...+|++|||+++||.+|||+|||+|+++||||||++ +.++|++|++||++||||++|..||++|..+.
T Consensus 3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~--~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~ 71 (337)
T KOG0712|consen 3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD--AGEKFKEISQAYEVLSDPEKREIYDQYGEEGL 71 (337)
T ss_pred ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc--HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhh
Confidence 4578999999999999999999999999999999966 89999999999999999999999999998754
|
|
| >PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli [] | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.7e-17 Score=165.43 Aligned_cols=68 Identities=21% Similarity=0.247 Sum_probs=64.9
Q ss_pred HHhCCChhhccccccccceeeeeeceeee----CCCEEEEEEeCCCchhhHHhhHHHHHhhccCCCccCccC
Q psy12972 147 EDFGCTHSQLFRSFDENPIAAASLAQSMV----TDEALGIKLHEFHEATNERPDHEFHEATNERPDHEFHEA 214 (1578)
Q Consensus 147 ~~lg~~~~~~F~~f~~~PiasASi~QVh~----~g~~vavKv~~p~v~~~i~~Dl~~~~~~~~~~~~~~~~~ 214 (1578)
++||++++++|++||++|||||||||||+ +|++||||||||||++.|..||++|+.+...++..+...
T Consensus 1 e~lG~~~~~~F~~fd~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~ 72 (119)
T PF03109_consen 1 EELGKPIDEIFDEFDPEPLASASIAQVHRARLKDGEEVAVKVQRPGIEEQIEADLRILRRLARLLERLPPFR 72 (119)
T ss_pred CCcCCCHHHHHHHCCcchhhheehhhheeeeecccchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 57999999999999999999999999999 899999999999999999999999999999998887765
|
These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins. |
| >cd03007 PDI_a_ERp29_N PDIa family, endoplasmic reticulum protein 29 (ERp29) subfamily; ERp29 is a ubiquitous ER-resident protein expressed in high levels in secretory cells | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.5e-16 Score=154.18 Aligned_cols=98 Identities=16% Similarity=0.155 Sum_probs=84.6
Q ss_pred EEeeccccccceecccCCCCcEEEEEEc--CCCc---ccccccHHHHHHHHHhCCCceEEEEEEC-----ccchhhHhHc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYS--DWCF---ACLQVEPIFKKLMDELSPLGVGFFTVHV-----HNEQGLARRL 924 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~Fya--pwCg---~Ck~l~p~~~~lA~~l~~~~v~~a~VDc-----~~~~~L~~k~ 924 (1578)
+++||.+||++.| +.++.+||+||| |||+ ||++++|+|.+++.. |.+|+||| +++.+||++|
T Consensus 3 ~v~L~~~nF~~~v---~~~~~vlV~F~A~~Pwc~k~~~~~~LA~e~~~aa~~-----v~lakVd~~d~~~~~~~~L~~~y 74 (116)
T cd03007 3 CVDLDTVTFYKVI---PKFKYSLVKFDTAYPYGEKHEAFTRLAESSASATDD-----LLVAEVGIKDYGEKLNMELGERY 74 (116)
T ss_pred eeECChhhHHHHH---hcCCcEEEEEeCCCCCCCChHHHHHHHHHHHhhcCc-----eEEEEEecccccchhhHHHHHHh
Confidence 4679999999987 557899999999 9999 888888888887754 78999999 5788999999
Q ss_pred Ccc--ccCCcEEEEcCCc--cccccCCC-CCHHHHHHHHHhh
Q psy12972 925 GVG--SQLPQIALLTDGR--TSFFKEPS-FSVQKMVEFFRLK 961 (1578)
Q Consensus 925 gV~--~~~PTl~lf~~G~--~~~y~~G~-~s~~~L~~fi~~~ 961 (1578)
+|+ + ||||++|++|. ....|.|. |++++|++||.++
T Consensus 75 ~I~~~g-yPTl~lF~~g~~~~~~~Y~G~~r~~~~lv~~v~~~ 115 (116)
T cd03007 75 KLDKES-YPVIYLFHGGDFENPVPYSGADVTVDALQRFLKGN 115 (116)
T ss_pred CCCcCC-CCEEEEEeCCCcCCCccCCCCcccHHHHHHHHHhc
Confidence 999 8 99999999985 33445686 9999999999875
|
It forms homodimers and higher oligomers in vitro and in vivo. It contains a redox inactive TRX-like domain at the N-terminus, which is homologous to the redox active TRX (a) domains of PDI, and a C-terminal helical domain similar to the C-terminal domain of P5. The expression profile of ERp29 suggests a role in secretory protein production distinct from that of PDI. It has also been identified as a member of the thyroglobulin folding complex. The Drosophila homolog, Wind, is the product of windbeutel, an essential gene in the development of dorsal-ventral patterning. Wind is required for correct targeting of Pipe, a Golgi-resident type II transmembrane protein with homology to 2-O-sulfotransferase. |
| >PF00085 Thioredoxin: Thioredoxin; InterPro: IPR013766 Thioredoxins [, , , ] are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.3e-15 Score=150.19 Aligned_cols=102 Identities=27% Similarity=0.525 Sum_probs=94.8
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
..+|.++|++.+.+ ++++++|.||++||++|+.+.|.|+++++.+.+ ++.++.|||++++.+|++|+|++ +||+++
T Consensus 2 ~~lt~~~f~~~i~~--~~~~vvv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~-~Pt~~~ 77 (103)
T PF00085_consen 2 IVLTDENFEKFINE--SDKPVVVYFYAPWCPPCKAFKPILEKLAKEYKD-NVKFAKVDCDENKELCKKYGVKS-VPTIIF 77 (103)
T ss_dssp EEESTTTHHHHHTT--TSSEEEEEEESTTSHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTSHHHHHHTTCSS-SSEEEE
T ss_pred EECCHHHHHHHHHc--cCCCEEEEEeCCCCCccccccceeccccccccc-ccccchhhhhccchhhhccCCCC-CCEEEE
Confidence 46899999999854 379999999999999999999999999999987 59999999999999999999997 999999
Q ss_pred EcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 936 LTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 936 f~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
|++|+....+.|.++.++|.+||+++
T Consensus 78 ~~~g~~~~~~~g~~~~~~l~~~i~~~ 103 (103)
T PF00085_consen 78 FKNGKEVKRYNGPRNAESLIEFIEKH 103 (103)
T ss_dssp EETTEEEEEEESSSSHHHHHHHHHHH
T ss_pred EECCcEEEEEECCCCHHHHHHHHHcC
Confidence 99999887888999999999999874
|
Thioredoxin serves as a general protein disulphide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of two cysteine thiol groups to a disulphide, accompanied by the transfer of two electrons and two protons. The net result is the covalent interconversion of a disulphide and a dithiol. In the NADPH-dependent protein disulphide reduction, thioredoxin reductase (TR) catalyses the reduction of oxidised thioredoxin (trx) by NADPH using FAD and its redox-active disulphide; reduced thioredoxin then directly reduces the disulphide in the substrate protein []. Thioredoxin is present in prokaryotes and eukaryotes and the sequence around the redox-active disulphide bond is well conserved. All thioredoxins contain a cis-proline located in a loop preceding beta-strand 4, which makes contact with the active site cysteines, and is important for stability and function []. Thioredoxin belongs to a structural family that includes glutaredoxin, glutathione peroxidase, bacterial protein disulphide isomerase DsbA, and the N-terminal domain of glutathione transferase []. Thioredoxins have a beta-alpha unit preceding the motif common to all these proteins. A number of eukaryotic proteins contain domains evolutionary related to thioredoxin, most of them are protein disulphide isomerases (PDI). PDI (5.3.4.1 from EC) [, , ] is an endoplasmic reticulum multi-functional enzyme that catalyses the formation and rearrangement of disulphide bonds during protein folding []. All PDI contains two or three (ERp72) copies of the thioredoxin domain, each of which contributes to disulphide isomerase activity, but which are functionally non-equivalent []. Moreover, PDI exhibits chaperone-like activity towards proteins that contain no disulphide bonds, i.e. behaving independently of its disulphide isomerase activity []. The various forms of PDI which are currently known are: PDI major isozyme; a multifunctional protein that also function as the beta subunit of prolyl 4-hydroxylase (1.14.11.2 from EC), as a component of oligosaccharyl transferase (2.4.1.119 from EC), as thyroxine deiodinase (3.8.1.4 from EC), as glutathione-insulin transhydrogenase (1.8.4.2 from EC) and as a thyroid hormone-binding protein ERp60 (ER-60; 58 Kd microsomal protein). ERp60 was originally thought to be a phosphoinositide-specific phospholipase C isozyme and later to be a protease. ERp72. ERp5. Bacterial proteins that act as thiol:disulphide interchange proteins that allows disulphide bond formation in some periplasmic proteins also contain a thioredoxin domain. These proteins include: Escherichia coli DsbA (or PrfA) and its orthologs in Vibrio cholerae (TtcpG) and Haemophilus influenzae (Por). E. coli DsbC (or XpRA) and its orthologues in Erwinia chrysanthemi and H. influenzae. E. coli DsbD (or DipZ) and its H. influenzae orthologue. E. coli DsbE (or CcmG) and orthologues in H. influenzae. Rhodobacter capsulatus (Rhodopseudomonas capsulata) (HelX), Rhiziobiacae (CycY and TlpA). This entry represents the thioredoxin domain.; GO: 0045454 cell redox homeostasis; PDB: 3ED3_B 1EP7_A 1EP8_B 1TOF_A 2OE3_B 2OE1_B 2OE0_B 1V98_A 3H79_A 3CXG_A .... |
| >PRK14296 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.9e-16 Score=186.21 Aligned_cols=69 Identities=48% Similarity=0.835 Sum_probs=66.5
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
..|||++|||+++||.+|||+|||+||++||||+|+++.|+++|++|++||++|+||++|+.||++|..
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~ 71 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHA 71 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhhhhhhccch
Confidence 479999999999999999999999999999999998888999999999999999999999999999875
|
|
| >cd03004 PDI_a_ERdj5_C PDIa family, C-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.2e-15 Score=151.52 Aligned_cols=100 Identities=20% Similarity=0.366 Sum_probs=89.2
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++++|.++|++.+... +++++|.|||+||++|+.+.|.|+++++.+.+. +.+++|||++++++|++++|.+ +||++
T Consensus 3 v~~l~~~~f~~~i~~~--~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~i~~-~Pt~~ 78 (104)
T cd03004 3 VITLTPEDFPELVLNR--KEPWLVDFYAPWCGPCQALLPELRKAARALKGK-VKVGSVDCQKYESLCQQANIRA-YPTIR 78 (104)
T ss_pred ceEcCHHHHHHHHhcC--CCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCchHHHHHHcCCCc-ccEEE
Confidence 4578999999987644 669999999999999999999999999999765 9999999999999999999998 99999
Q ss_pred EEcCC-ccccccCCCCC-HHHHHHHH
Q psy12972 935 LLTDG-RTSFFKEPSFS-VQKMVEFF 958 (1578)
Q Consensus 935 lf~~G-~~~~y~~G~~s-~~~L~~fi 958 (1578)
+|++| +....+.|..+ .++|.+|+
T Consensus 79 ~~~~g~~~~~~~~G~~~~~~~l~~~i 104 (104)
T cd03004 79 LYPGNASKYHSYNGWHRDADSILEFI 104 (104)
T ss_pred EEcCCCCCceEccCCCCCHHHHHhhC
Confidence 99988 76666778887 99999885
|
This subfamily is composed of the three TRX domains located at the C-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation. Also included in the alignment is the single complete TRX domain of an uncharacterized protein from Tetraodon nigroviridis, which also contains a DnaJ domain at its N-terminus. |
| >cd02996 PDI_a_ERp44 PDIa family, endoplasmic reticulum protein 44 (ERp44) subfamily; ERp44 is an ER-resident protein, induced during stress, involved in thiol-mediated ER retention | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.7e-15 Score=151.58 Aligned_cols=100 Identities=24% Similarity=0.371 Sum_probs=88.0
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC-----ceEEEEEECccchhhHhHcCcccc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-----GVGFFTVHVHNEQGLARRLGVGSQ 929 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~-----~v~~a~VDc~~~~~L~~k~gV~~~ 929 (1578)
+++++.++|++.+ +.+++++|.||||||++|+++.|.|+++|+.+++. .+.+++|||+++.++|++|+|++
T Consensus 3 v~~l~~~~f~~~i---~~~~~vlv~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~v~~- 78 (108)
T cd02996 3 IVSLTSGNIDDIL---QSAELVLVNFYADWCRFSQMLHPIFEEAAAKIKEEFPDAGKVVWGKVDCDKESDIADRYRINK- 78 (108)
T ss_pred eEEcCHhhHHHHH---hcCCEEEEEEECCCCHHHHhhHHHHHHHHHHHhhccCCCCcEEEEEEECCCCHHHHHhCCCCc-
Confidence 5678999999876 34679999999999999999999999999987421 38999999999999999999998
Q ss_pred CCcEEEEcCCc-cccccCCCCCHHHHHHHH
Q psy12972 930 LPQIALLTDGR-TSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 930 ~PTl~lf~~G~-~~~y~~G~~s~~~L~~fi 958 (1578)
+||+++|++|+ ....+.|.++.++|++||
T Consensus 79 ~Ptl~~~~~g~~~~~~~~g~~~~~~l~~fi 108 (108)
T cd02996 79 YPTLKLFRNGMMMKREYRGQRSVEALAEFV 108 (108)
T ss_pred CCEEEEEeCCcCcceecCCCCCHHHHHhhC
Confidence 99999999998 445666999999999985
|
It contains an N-terminal TRX domain, similar to that of PDIa, with a CXFS motif followed by two redox inactive TRX-like domains, homologous to the b and b' domains of PDI. The CXFS motif in the N-terminal domain allows ERp44 to form stable reversible mixed disulfides with its substrates. Through this activity, ERp44 mediates the ER localization of Ero1alpha, a protein that oxidizes protein disulfide isomerases into their active form. ERp44 also prevents the secretion of unassembled cargo protein with unpaired cysteines. It also modulates the activity of inositol 1,4,5-triphosphate type I receptor (IP3R1), an intracellular channel protein that mediates calcium release from the ER to the cytosol. |
| >PRK14288 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1e-15 Score=184.67 Aligned_cols=98 Identities=33% Similarity=0.678 Sum_probs=76.8
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDSAS 714 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~~~ 714 (1578)
..|+|++|||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||++|+||++|+.||++|..+...+. ..+
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~-~~~ 80 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAG-ASQ 80 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCC-CCc
Confidence 369999999999999999999999999999999997 577899999999999999999999999999975322111 111
Q ss_pred cccCCCCCCCcccccccCCCC
Q psy12972 715 RNFHNHMYNPFDDVFSEGFNF 735 (1578)
Q Consensus 715 ~~~~~~~~~~f~~~F~~~Fg~ 735 (1578)
.+|. ..|.+|.++|+++||.
T Consensus 81 ~~~~-~~f~~~~~~F~~~fg~ 100 (369)
T PRK14288 81 SDFS-DFFEDLGSFFEDAFGF 100 (369)
T ss_pred cccc-cchhhHHHHHHhhcCC
Confidence 1222 1244556677766653
|
|
| >cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain | Back alignment and domain information |
|---|
Probab=99.59 E-value=2e-15 Score=152.04 Aligned_cols=103 Identities=43% Similarity=0.868 Sum_probs=93.7
Q ss_pred eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEE
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALL 936 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf 936 (1578)
.+|.++|.+.+...+.+++++|.||||||++|+.+.|.|+++++.+.+.++.+++|||++++.+|++++|.+ +||+++|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~d~~~~l~~~~~V~~-~Pt~~i~ 86 (111)
T cd02963 8 SLTFSQYENEIVPKSFKKPYLIKITSDWCFSCIHIEPVWKEVIQELEPLGVGIATVNAGHERRLARKLGAHS-VPAIVGI 86 (111)
T ss_pred eeeHHHHHHhhccccCCCeEEEEEECCccHhHHHhhHHHHHHHHHHHhcCceEEEEeccccHHHHHHcCCcc-CCEEEEE
Confidence 568888988776655689999999999999999999999999999986569999999999999999999998 9999999
Q ss_pred cCCccccccCCCCCHHHHHHHHHh
Q psy12972 937 TDGRTSFFKEPSFSVQKMVEFFRL 960 (1578)
Q Consensus 937 ~~G~~~~y~~G~~s~~~L~~fi~~ 960 (1578)
++|+...+..|..+.+.|.+|+.+
T Consensus 87 ~~g~~~~~~~G~~~~~~l~~~i~~ 110 (111)
T cd02963 87 INGQVTFYHDSSFTKQHVVDFVRK 110 (111)
T ss_pred ECCEEEEEecCCCCHHHHHHHHhc
Confidence 999988887899999999999975
|
DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network. |
| >TIGR02187 GlrX_arch Glutaredoxin-like domain protein | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.5e-15 Score=171.03 Aligned_cols=175 Identities=13% Similarity=0.182 Sum_probs=120.3
Q ss_pred Cccceecccc---ccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccccccccCccccccc
Q psy12972 765 TTPHLILFYS---DWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNFHNHMYNPFDDVFS 838 (1578)
Q Consensus 765 ~~~~lV~FYA---pwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i~~~Ptiklf~ 838 (1578)
++..++.|++ |||++|+.+.|.++++++.+.+..+.+++++.+. ++...++.+ .||+.+|+
T Consensus 19 ~~~~i~~f~~~~a~wC~~C~~~~p~l~~la~~~~~~~i~~v~vd~~~~~~l~~~~~V~~-------------~Pt~~~f~ 85 (215)
T TIGR02187 19 NPVEIVVFTDNDKEGCQYCKETEQLLEELSEVSPKLKLEIYDFDTPEDKEEAEKYGVER-------------VPTTIILE 85 (215)
T ss_pred CCeEEEEEcCCCCCCCCchHHHHHHHHHHHhhCCCceEEEEecCCcccHHHHHHcCCCc-------------cCEEEEEe
Confidence 4455777999 9999999999999999999865445555554322 444444444 48888887
Q ss_pred ccccc--CccC----cccceeE---------EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhC
Q psy12972 839 EGFNF--PFEE----HDISLFH---------KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELS 903 (1578)
Q Consensus 839 ~~~~~--~~~~----~~i~~~~---------vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~ 903 (1578)
+|-.. .+.+ .....+. ...++..+.+. +. ...+...++.||++||++|+.+.|.+++++...
T Consensus 86 ~g~~~~~~~~G~~~~~~l~~~i~~~~~~~~~~~~L~~~~~~~-l~-~~~~pv~I~~F~a~~C~~C~~~~~~l~~l~~~~- 162 (215)
T TIGR02187 86 EGKDGGIRYTGIPAGYEFAALIEDIVRVSQGEPGLSEKTVEL-LQ-SLDEPVRIEVFVTPTCPYCPYAVLMAHKFALAN- 162 (215)
T ss_pred CCeeeEEEEeecCCHHHHHHHHHHHHHhcCCCCCCCHHHHHH-HH-hcCCCcEEEEEECCCCCCcHHHHHHHHHHHHhc-
Confidence 64331 2222 1111110 01222222221 11 112334455599999999999999999999874
Q ss_pred CCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHHHHHHh
Q psy12972 904 PLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRL 960 (1578)
Q Consensus 904 ~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~ 960 (1578)
+. +.+..+|.+.+++++++|+|.+ +||++++.+|.. +.|..+.+++.+|+.+
T Consensus 163 ~~-i~~~~vD~~~~~~~~~~~~V~~-vPtl~i~~~~~~---~~G~~~~~~l~~~l~~ 214 (215)
T TIGR02187 163 DK-ILGEMIEANENPDLAEKYGVMS-VPKIVINKGVEE---FVGAYPEEQFLEYILS 214 (215)
T ss_pred Cc-eEEEEEeCCCCHHHHHHhCCcc-CCEEEEecCCEE---EECCCCHHHHHHHHHh
Confidence 33 8899999999999999999997 999999988753 4488888999999865
|
This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different. |
| >cd03065 PDI_b_Calsequestrin_N PDIb family, Calsequestrin subfamily, N-terminal TRX-fold domain; Calsequestrin is the major calcium storage protein in the sarcoplasmic reticulum (SR) of skeletal and cardiac muscle | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.8e-15 Score=151.87 Aligned_cols=105 Identities=17% Similarity=0.220 Sum_probs=90.3
Q ss_pred EEEeeccccccceecccCCCCcEEEEEEcCCCcc--cc--cccHHHHHHHHHh-CCCceEEEEEECccchhhHhHcCccc
Q psy12972 854 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFA--CL--QVEPIFKKLMDEL-SPLGVGFFTVHVHNEQGLARRLGVGS 928 (1578)
Q Consensus 854 ~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~--Ck--~l~p~~~~lA~~l-~~~~v~~a~VDc~~~~~L~~k~gV~~ 928 (1578)
.++.+|++||++.|.++ +.++++.|+++||++ |+ .++|.+.++|.++ +..++.|++|||++++++|++|||.+
T Consensus 10 ~v~~lt~~nF~~~v~~~--~~~vvv~f~a~wc~p~~Ck~~~~~p~~~~~aa~~l~~~~v~~~kVD~d~~~~La~~~~I~~ 87 (120)
T cd03065 10 RVIDLNEKNYKQVLKKY--DVLCLLYHEPVESDKEAQKQFQMEELVLELAAQVLEDKGIGFGLVDSKKDAKVAKKLGLDE 87 (120)
T ss_pred ceeeCChhhHHHHHHhC--CceEEEEECCCcCChhhChhhcchhhHHHHHHHHhhcCCCEEEEEeCCCCHHHHHHcCCcc
Confidence 35678999999998644 778899999999975 99 7788888887776 33349999999999999999999998
Q ss_pred cCCcEEEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 929 QLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 929 ~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|||++|++|+.+. +.|.++.+.|++|+.+.+
T Consensus 88 -iPTl~lfk~G~~v~-~~G~~~~~~l~~~l~~~~ 119 (120)
T cd03065 88 -EDSIYVFKDDEVIE-YDGEFAADTLVEFLLDLI 119 (120)
T ss_pred -ccEEEEEECCEEEE-eeCCCCHHHHHHHHHHHh
Confidence 99999999999877 679999999999998653
|
It stores calcium ions in sufficient quantities (up to 20 mM) to allow repetitive contractions and is essential to maintain movement, respiration and heart beat. A missense mutation in human cardiac calsequestrin is associated with catecholamine-induced polymorphic ventricular tachycardia (CPVT), a rare disease characterized by seizures or sudden death in response to physiologic or emotional stress. Calsequestrin is a highly acidic protein with up to 50 calcium binding sites formed simply by the clustering of two or more acidic residues. The monomer contains three redox inactive TRX-fold domains. Calsequestrin is condensed as a linear polymer in the SR lumen and is membrane-anchored through binding with intra-membrane proteins triadin, junctin and ryanodine receptor (RyR) Ca2 |
| >KOG0910|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.1e-15 Score=154.55 Aligned_cols=103 Identities=17% Similarity=0.389 Sum_probs=96.6
Q ss_pred eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEE
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALL 936 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf 936 (1578)
.++...|++.|+++ +.|++|+|||+|||+|+.+.|..++++.++.|+ +++++||.+++.+++.+|+|+. +||+++|
T Consensus 47 ~~s~~~~~~~Vi~S--~~PVlVdF~A~WCgPCk~l~P~l~~~~~~~~g~-~k~~kvdtD~~~ela~~Y~I~a-vPtvlvf 122 (150)
T KOG0910|consen 47 VQSDSEFDDKVINS--DVPVLVDFHAEWCGPCKMLGPILEELVSEYAGK-FKLYKVDTDEHPELAEDYEISA-VPTVLVF 122 (150)
T ss_pred ccCHHHHHHHHHcc--CCCEEEEEecCcCccHhHhhHHHHHHHHhhcCe-EEEEEEccccccchHhhcceee-eeEEEEE
Confidence 57888999998765 899999999999999999999999999999987 9999999999999999999998 9999999
Q ss_pred cCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 937 TDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 937 ~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
++|+......|..+.+.|.+||++.++
T Consensus 123 knGe~~d~~vG~~~~~~l~~~i~k~l~ 149 (150)
T KOG0910|consen 123 KNGEKVDRFVGAVPKEQLRSLIKKFLK 149 (150)
T ss_pred ECCEEeeeecccCCHHHHHHHHHHHhc
Confidence 999999888899999999999988764
|
|
| >cd02994 PDI_a_TMX PDIa family, TMX subfamily; composed of proteins similar to the TRX-related human transmembrane protein, TMX | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.7e-15 Score=145.83 Aligned_cols=99 Identities=27% Similarity=0.427 Sum_probs=87.7
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++++|.++|++.+ ++.++|.|||+||++|+.+.|.|+++++.+++.++.+++|||++++.+|++|+|.+ +||++
T Consensus 3 v~~l~~~~f~~~~-----~~~~lv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~i~~-~Pt~~ 76 (101)
T cd02994 3 VVELTDSNWTLVL-----EGEWMIEFYAPWCPACQQLQPEWEEFADWSDDLGINVAKVDVTQEPGLSGRFFVTA-LPTIY 76 (101)
T ss_pred eEEcChhhHHHHh-----CCCEEEEEECCCCHHHHHHhHHHHHHHHhhccCCeEEEEEEccCCHhHHHHcCCcc-cCEEE
Confidence 5678999999865 22389999999999999999999999998876569999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHh
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRL 960 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~ 960 (1578)
+|++|+. ..+.|.++.++|.+|+.+
T Consensus 77 ~~~~g~~-~~~~G~~~~~~l~~~i~~ 101 (101)
T cd02994 77 HAKDGVF-RRYQGPRDKEDLISFIEE 101 (101)
T ss_pred EeCCCCE-EEecCCCCHHHHHHHHhC
Confidence 9999985 455699999999999863
|
TMX is a type I integral membrane protein; the N-terminal redox active TRX domain is present in the endoplasmic reticulum (ER) lumen while the C-terminus is oriented towards the cytoplasm. It is expressed in many cell types and its active site motif (CPAC) is unique. In vitro, TMX reduces interchain disulfides of insulin and renatures inactive RNase containing incorrect disulfide bonds. The C. elegans homolog, DPY-11, is expressed only in the hypodermis and resides in the cytoplasm. It is required for body and sensory organ morphogeneis. Another uncharacterized TRX-related transmembrane protein, human TMX4, is included in the alignment. The active site sequence of TMX4 is CPSC. |
| >COG3118 Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.6e-15 Score=167.58 Aligned_cols=108 Identities=27% Similarity=0.418 Sum_probs=104.0
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++++|+.||.+.|+..+..+|++|.||+|||++|+.+.|..++++.+++|. +.+++|||+.++.++..|||++ .||++
T Consensus 25 I~dvT~anfe~~V~~~S~~~PVlV~fWap~~~~c~qL~p~Lekla~~~~G~-f~LakvN~D~~p~vAaqfgiqs-IPtV~ 102 (304)
T COG3118 25 IKDVTEANFEQEVIQSSREVPVLVDFWAPWCGPCKQLTPTLEKLAAEYKGK-FKLAKVNCDAEPMVAAQFGVQS-IPTVY 102 (304)
T ss_pred ceechHhHHHHHHHHHccCCCeEEEecCCCCchHHHHHHHHHHHHHHhCCc-eEEEEecCCcchhHHHHhCcCc-CCeEE
Confidence 568999999999999999999999999999999999999999999999998 9999999999999999999997 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
.|++|+++.-+.|....+.|..|+.+.+|.
T Consensus 103 af~dGqpVdgF~G~qPesqlr~~ld~~~~~ 132 (304)
T COG3118 103 AFKDGQPVDGFQGAQPESQLRQFLDKVLPA 132 (304)
T ss_pred EeeCCcCccccCCCCcHHHHHHHHHHhcCh
Confidence 999999999999999999999999999976
|
|
| >PRK14287 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.5e-15 Score=180.24 Aligned_cols=95 Identities=40% Similarity=0.709 Sum_probs=76.9
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCCCCc
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDSASR 715 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~~~~ 715 (1578)
..|||++|||+++||.+|||+|||+||++||||+++++.++++|++|++||++|+||.+|+.||++|..+...+... .
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~--~ 80 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGG--G 80 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCC--C
Confidence 46999999999999999999999999999999999888899999999999999999999999999997643211100 0
Q ss_pred ccCCCCCCCcccccccCCC
Q psy12972 716 NFHNHMYNPFDDVFSEGFN 734 (1578)
Q Consensus 716 ~~~~~~~~~f~~~F~~~Fg 734 (1578)
++ .+|.+|.|+|+.+||
T Consensus 81 ~~--~~f~~~~d~f~~~fg 97 (371)
T PRK14287 81 GA--GDFGGFSDIFDMFFG 97 (371)
T ss_pred CC--ccccchHHHHHhhhc
Confidence 11 123346677777766
|
|
| >PRK14298 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.9e-15 Score=180.00 Aligned_cols=98 Identities=41% Similarity=0.734 Sum_probs=78.5
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCCCCc
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDSASR 715 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~~~~ 715 (1578)
..|||++|||+++||.+|||+|||+||++||||+++++.++++|++|++||++|+||.+|+.||++|..+...+... ..
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~-~~ 82 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSA-ED 82 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCc-cc
Confidence 46999999999999999999999999999999999888899999999999999999999999999987532211110 01
Q ss_pred ccCCCCCCCcccccccCCC
Q psy12972 716 NFHNHMYNPFDDVFSEGFN 734 (1578)
Q Consensus 716 ~~~~~~~~~f~~~F~~~Fg 734 (1578)
.|...+|.+|.++|+.+||
T Consensus 83 ~~~~~~~~~~~d~f~~~Fg 101 (377)
T PRK14298 83 IFRGADFGGFGDIFEMFFG 101 (377)
T ss_pred ccccCCcCcchhhhHhhhc
Confidence 1222234557778887776
|
|
| >PRK14276 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.2e-15 Score=180.30 Aligned_cols=99 Identities=36% Similarity=0.687 Sum_probs=78.9
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCC---
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDS--- 712 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~--- 712 (1578)
..|||++|||+++||.+|||+|||+||++||||+++++.++++|++|++||++|+||.+|+.||++|..+...+...
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~~ 82 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGAG 82 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCCC
Confidence 46999999999999999999999999999999999888899999999999999999999999999997643211111
Q ss_pred CCcccCC-CCCCCcccccccCCC
Q psy12972 713 ASRNFHN-HMYNPFDDVFSEGFN 734 (1578)
Q Consensus 713 ~~~~~~~-~~~~~f~~~F~~~Fg 734 (1578)
...++.. .+|.+|.++|+.+||
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~~fg 105 (380)
T PRK14276 83 GFGGFDGSGGFGGFEDIFSSFFG 105 (380)
T ss_pred CCCCccccccccchhhHHHHHhC
Confidence 1111211 134457788887776
|
|
| >PRK14299 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.7e-15 Score=173.77 Aligned_cols=99 Identities=41% Similarity=0.730 Sum_probs=78.3
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCC---CC-
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSG---QD- 711 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~---~~- 711 (1578)
..|||++|||+++||.+|||+|||+|+++||||+++++.++++|++|++||++|+|+.+|+.||.+|......+ ..
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~~ 82 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPP 82 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCCC
Confidence 47999999999999999999999999999999999888899999999999999999999999999987632111 10
Q ss_pred --CCCcccCCCCCCCcccccccCCC
Q psy12972 712 --SASRNFHNHMYNPFDDVFSEGFN 734 (1578)
Q Consensus 712 --~~~~~~~~~~~~~f~~~F~~~Fg 734 (1578)
.+..++.++.+.+|.++|+.+||
T Consensus 83 ~~~~~~~~~~~~~~~~~d~f~~~fg 107 (291)
T PRK14299 83 GPPGGGDFSGFNVGDFSDFFQQLFG 107 (291)
T ss_pred CCCCCCCccccCcCCHHHHHHHHhC
Confidence 00111222223456777877776
|
|
| >KOG0717|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.6e-15 Score=176.37 Aligned_cols=72 Identities=40% Similarity=0.626 Sum_probs=66.6
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC--hhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--PTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
....+.+|++|||.++|+..+||++||+||++||||||++ ..++++|+.|+.||+|||||..|+.||.+...
T Consensus 4 ~~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreq 77 (508)
T KOG0717|consen 4 PFKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQ 77 (508)
T ss_pred chhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHH
Confidence 3456899999999999999999999999999999999885 67899999999999999999999999988764
|
|
| >PRK14286 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.4e-15 Score=179.45 Aligned_cols=99 Identities=34% Similarity=0.710 Sum_probs=77.3
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCC-C
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDS-A 713 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~-~ 713 (1578)
..|+|++|||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||++|+||.+|+.||++|..+...+... .
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~ 82 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFG 82 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccCCCC
Confidence 469999999999999999999999999999999997 47789999999999999999999999999987642211100 1
Q ss_pred CcccCCC--CCCCcccccccCCC
Q psy12972 714 SRNFHNH--MYNPFDDVFSEGFN 734 (1578)
Q Consensus 714 ~~~~~~~--~~~~f~~~F~~~Fg 734 (1578)
..++.++ .|.+|+++|+.+||
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~ffg 105 (372)
T PRK14286 83 QGAYTDFSDIFGDFGDIFGDFFG 105 (372)
T ss_pred CCCcccccccccchhhHHHHhhC
Confidence 0111111 13456778887776
|
|
| >KOG0191|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.9e-14 Score=170.06 Aligned_cols=208 Identities=19% Similarity=0.326 Sum_probs=150.8
Q ss_pred eccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEc
Q psy12972 858 TTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLT 937 (1578)
Q Consensus 858 Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~ 937 (1578)
++..+|...+. ..+.+++|+||+|||+||+++.|+|+++++.+++. +.++.|||+.++++|++|+|.+ |||+.+|.
T Consensus 34 ~~~~~~~~~~~--~~~~~~~v~fyapwc~~c~~l~~~~~~~~~~l~~~-~~~~~vd~~~~~~~~~~y~i~g-fPtl~~f~ 109 (383)
T KOG0191|consen 34 LTLDSFFDFLL--KDDSPWLVEFYAPWCGHCKKLAPTYKKLAKALKGK-VKIGAVDCDEHKDLCEKYGIQG-FPTLKVFR 109 (383)
T ss_pred hhccccHHHhh--ccCCceEEEEECCCCcchhhhchHHHHHHHHhcCc-eEEEEeCchhhHHHHHhcCCcc-CcEEEEEc
Confidence 44555665554 44899999999999999999999999999999986 9999999999999999999998 99999999
Q ss_pred CCccccccCCCCCHHHHHHHHHhhCCCcc-------ccccccccHHHHhhcccCCCcEEEEEec------cCCchHHHHH
Q psy12972 938 DGRTSFFKEPSFSVQKMVEFFRLKLPYKL-------IVPLSATNVDAFLDNWREDNKVHALLFQ------RSLPVRLRYL 1004 (1578)
Q Consensus 938 ~G~~~~y~~G~~s~~~L~~fi~~~lp~~v-------v~~it~~~~~~fl~~~~~~~~~~VlfF~------~~~~~~~~~~ 1004 (1578)
.|.....+.|.++++.+.+|+.+.+.+.+ +...+..++....... +...+|.||. +.-.+.+...
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~--~~~~lv~f~aPwc~~ck~l~~~~~~~ 187 (383)
T KOG0191|consen 110 PGKKPIDYSGPRNAESLAEFLIKELEPSVKKLVEGEVFELTKDNFDETVKDS--DADWLVEFYAPWCGHCKKLAPEWEKL 187 (383)
T ss_pred CCCceeeccCcccHHHHHHHHHHhhccccccccCCceEEccccchhhhhhcc--CcceEEEEeccccHHhhhcChHHHHH
Confidence 98444445589999999999987764332 2233455666665543 3556666663 3334555555
Q ss_pred HHHhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhhcCCCC
Q psy12972 1005 INAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNNPYL 1076 (1578)
Q Consensus 1005 ~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~nk~p 1076 (1578)
...++....+..+.+ +++....++.+++|.. .|++.+|+.+.. +. ......-+...+..|+....-.
T Consensus 188 a~~~~~~~~v~~~~~--d~~~~~~~~~~~~v~~-~Pt~~~f~~~~~-~~-~~~~~~R~~~~i~~~v~~~~~~ 254 (383)
T KOG0191|consen 188 AKLLKSKENVELGKI--DATVHKSLASRLEVRG-YPTLKLFPPGEE-DI-YYYSGLRDSDSIVSFVEKKERR 254 (383)
T ss_pred HHHhccCcceEEEee--ccchHHHHhhhhcccC-CceEEEecCCCc-cc-ccccccccHHHHHHHHHhhcCC
Confidence 554444566777666 3446788899999987 469999976544 22 2223333556788887776544
|
|
| >PTZ00443 Thioredoxin domain-containing protein; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.3e-14 Score=162.51 Aligned_cols=107 Identities=22% Similarity=0.427 Sum_probs=97.0
Q ss_pred EEEeeccccccceecccC--CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCC
Q psy12972 854 HKLSTTHWNFEKNYIPKS--YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLP 931 (1578)
Q Consensus 854 ~vi~Lt~~nF~~~vl~~s--~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~P 931 (1578)
.++++|++||++.+.... ..++|+|.||||||++|+++.|.|+++++.+++. +.+++|||++++++|++|+|++ +|
T Consensus 31 ~Vv~Lt~~nF~~~v~~~~~~~~~~vlV~FyApWC~~Ck~~~P~~e~la~~~~~~-v~~~~VD~~~~~~l~~~~~I~~-~P 108 (224)
T PTZ00443 31 ALVLLNDKNFEKLTQASTGATTGPWFVKFYAPWCSHCRKMAPAWERLAKALKGQ-VNVADLDATRALNLAKRFAIKG-YP 108 (224)
T ss_pred CcEECCHHHHHHHHhhhcccCCCCEEEEEECCCChHHHHHHHHHHHHHHHcCCC-eEEEEecCcccHHHHHHcCCCc-CC
Confidence 467899999999775432 3689999999999999999999999999999876 9999999999999999999998 99
Q ss_pred cEEEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 932 QIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 932 Tl~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|+++|++|+...++.|.++.++|.+|+.+..
T Consensus 109 Tl~~f~~G~~v~~~~G~~s~e~L~~fi~~~~ 139 (224)
T PTZ00443 109 TLLLFDKGKMYQYEGGDRSTEKLAAFALGDF 139 (224)
T ss_pred EEEEEECCEEEEeeCCCCCHHHHHHHHHHHH
Confidence 9999999998888889999999999998765
|
|
| >cd03002 PDI_a_MPD1_like PDI family, MPD1-like subfamily; composed of eukaryotic proteins similar to Saccharomyces cerevisiae MPD1 protein, which contains a single redox active TRX domain located at the N-terminus, and an ER retention signal at the C-terminus indicative of an ER-resident protein | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.2e-14 Score=143.47 Aligned_cols=101 Identities=24% Similarity=0.393 Sum_probs=89.4
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc--chhhHhHcCccccCCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN--EQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~--~~~L~~k~gV~~~~PT 932 (1578)
+++++.++|++.+.+. +++++|.||++||++|+++.|.|+++++.+.+. +.++.|||+. +.++|++|+|.+ +||
T Consensus 2 v~~l~~~~~~~~i~~~--~~~~lv~f~a~wC~~C~~~~~~~~~~a~~~~~~-~~~~~v~~~~~~~~~~~~~~~i~~-~Pt 77 (109)
T cd03002 2 VYELTPKNFDKVVHNT--NYTTLVEFYAPWCGHCKNLKPEYAKAAKELDGL-VQVAAVDCDEDKNKPLCGKYGVQG-FPT 77 (109)
T ss_pred eEEcchhhHHHHHhcC--CCeEEEEEECCCCHHHHhhChHHHHHHHHhcCC-ceEEEEecCccccHHHHHHcCCCc-CCE
Confidence 4578999999988643 778999999999999999999999999999865 8999999998 889999999998 999
Q ss_pred EEEEcCCc-----cccccCCCCCHHHHHHHHH
Q psy12972 933 IALLTDGR-----TSFFKEPSFSVQKMVEFFR 959 (1578)
Q Consensus 933 l~lf~~G~-----~~~y~~G~~s~~~L~~fi~ 959 (1578)
+++|.+|. ....+.|.++.++|++||.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~G~~~~~~l~~fi~ 109 (109)
T cd03002 78 LKVFRPPKKASKHAVEDYNGERSAKAIVDFVL 109 (109)
T ss_pred EEEEeCCCcccccccccccCccCHHHHHHHhC
Confidence 99998885 3455679999999999983
|
MPD1 has been shown to suppress the maturation defect of carboxypeptidase Y caused by deletion of the yeast PDI1 gene. Other characterized members of this subfamily include the Aspergillus niger prpA protein and Giardia PDI-1. PrpA is non-essential to strain viability, however, its transcript level is induced by heterologous protein expression suggesting a possible role in oxidative protein folding during high protein production. Giardia PDI-1 has the ability to refold scrambled RNase and exhibits transglutaminase activity. |
| >PRK14278 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.2e-14 Score=176.03 Aligned_cols=95 Identities=41% Similarity=0.598 Sum_probs=76.4
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCCCCcc
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDSASRN 716 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~~~~~ 716 (1578)
.|||++|||+++||.+|||+|||+||++||||+++++.|+++|++|++||++|+|+.+|+.||++|......+. .+.+
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~~--~~~g 80 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGG--GGGG 80 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccccC--CCCC
Confidence 69999999999999999999999999999999999888999999999999999999999999999875211110 0111
Q ss_pred cCCCCCCCcccccccCCC
Q psy12972 717 FHNHMYNPFDDVFSEGFN 734 (1578)
Q Consensus 717 ~~~~~~~~f~~~F~~~Fg 734 (1578)
+. .+|.+|+++|+.+||
T Consensus 81 ~~-~~f~~~~d~f~~ffg 97 (378)
T PRK14278 81 FG-GGFGGLGDVFEAFFG 97 (378)
T ss_pred CC-cCcCchhHHHHHHhC
Confidence 11 124456677777765
|
|
| >PRK14285 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.1e-14 Score=175.58 Aligned_cols=98 Identities=39% Similarity=0.685 Sum_probs=76.9
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCC--CC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQD--SA 713 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~--~~ 713 (1578)
.|+|++|||+++||.+|||+|||+|+++||||+++ ++.++++|++|++||++|+|+.+|+.||++|..+...+.. ..
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~~~~~~ 82 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEGF 82 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCCCcccc
Confidence 69999999999999999999999999999999997 4678899999999999999999999999998764221111 00
Q ss_pred CcccCC--CCCCCcccccccCCC
Q psy12972 714 SRNFHN--HMYNPFDDVFSEGFN 734 (1578)
Q Consensus 714 ~~~~~~--~~~~~f~~~F~~~Fg 734 (1578)
..++.. ..|.+|+++|+.+||
T Consensus 83 ~~g~~~~~~~~~~~~d~f~~~fg 105 (365)
T PRK14285 83 SGGFSGFSDIFEDFGDIFDSFFT 105 (365)
T ss_pred CCCccccccccccHHHHHHHhhc
Confidence 011111 123457788888776
|
|
| >PRK14301 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.3e-14 Score=175.54 Aligned_cols=98 Identities=41% Similarity=0.769 Sum_probs=77.2
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDSAS 714 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~~~ 714 (1578)
..|+|++|||+++||.++||+|||+||++||||+++ ++.|+++|++|++||++|+||.+|+.||.+|..+..+++ .+
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~--~~ 80 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNG--GF 80 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCC--CC
Confidence 479999999999999999999999999999999987 467889999999999999999999999999876422111 11
Q ss_pred cccCC--CCCCCcccccccCCCC
Q psy12972 715 RNFHN--HMYNPFDDVFSEGFNF 735 (1578)
Q Consensus 715 ~~~~~--~~~~~f~~~F~~~Fg~ 735 (1578)
.+|.+ ..|..|.++|+.+||+
T Consensus 81 ~g~~~~~~~~~~f~d~f~~~fg~ 103 (373)
T PRK14301 81 GGFSSAEDIFSHFSDIFGDLFGF 103 (373)
T ss_pred CCcccccccccchHHHHHHHhhc
Confidence 12211 1244567777776653
|
|
| >PRK14294 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.3e-14 Score=175.29 Aligned_cols=99 Identities=39% Similarity=0.690 Sum_probs=77.7
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDSAS 714 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~~~ 714 (1578)
..|||++|||+++||.+|||+|||+||++||||+++ ++.++++|++|++||++|+||.+|+.||++|..+...++....
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~~~~~~ 82 (366)
T PRK14294 3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFSGF 82 (366)
T ss_pred CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCCCCCCc
Confidence 579999999999999999999999999999999997 4778999999999999999999999999999764221110000
Q ss_pred cccCCCCCCCcccccccCCCC
Q psy12972 715 RNFHNHMYNPFDDVFSEGFNF 735 (1578)
Q Consensus 715 ~~~~~~~~~~f~~~F~~~Fg~ 735 (1578)
.++. ..|..|+++|+.+||+
T Consensus 83 ~~~~-~~~~~~~d~f~~~fg~ 102 (366)
T PRK14294 83 SGFD-DIFSSFGDIFEDFFGF 102 (366)
T ss_pred Cccc-cchhhhhhhHHHhhcc
Confidence 1111 1234567778877763
|
|
| >PRK14280 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.5e-14 Score=175.31 Aligned_cols=70 Identities=47% Similarity=0.826 Sum_probs=66.8
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
..|||++|||+++||.+|||+|||+|+++||||+++++.++++|++|++||++|+||.+|+.||++|..+
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~ 72 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAG 72 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHHHHHhcCccc
Confidence 3699999999999999999999999999999999988889999999999999999999999999999764
|
|
| >PRK14297 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.9e-14 Score=174.86 Aligned_cols=70 Identities=49% Similarity=0.872 Sum_probs=65.9
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
..|||++|||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||++|+||.+|+.||++|..+
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~ 73 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTAD 73 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCccc
Confidence 469999999999999999999999999999999997 4678999999999999999999999999999764
|
|
| >cd02993 PDI_a_APS_reductase PDIa family, 5'-Adenylylsulfate (APS) reductase subfamily; composed of plant-type APS reductases containing a C-terminal redox active TRX domain and an N-terminal reductase domain which is part of a superfamily that includes N type ATP PPases | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.7e-14 Score=142.39 Aligned_cols=103 Identities=17% Similarity=0.345 Sum_probs=87.9
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc-chhhHhH-cCccccCCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-EQGLARR-LGVGSQLPQ 932 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~-~~~L~~k-~gV~~~~PT 932 (1578)
++++|.++|+..+...+.+++++|.||+|||++|+++.|.|.++++.+++.++.++.|||+. +..+|++ ++|++ +||
T Consensus 3 v~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~la~~~~~~~~~~~~vd~d~~~~~~~~~~~~v~~-~Pt 81 (109)
T cd02993 3 VVTLSRAEIEALAKGERRNQSTLVVLYAPWCPFCQAMEASYEELAEKLAGSNVKVAKFNADGEQREFAKEELQLKS-FPT 81 (109)
T ss_pred ceeccHHHHHHHHhhhhcCCCEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECCccchhhHHhhcCCCc-CCE
Confidence 56789999998876555678999999999999999999999999999987669999999998 5788874 99997 999
Q ss_pred EEEEcCCc-cccccCC-CCCHHHHHHHH
Q psy12972 933 IALLTDGR-TSFFKEP-SFSVQKMVEFF 958 (1578)
Q Consensus 933 l~lf~~G~-~~~y~~G-~~s~~~L~~fi 958 (1578)
+++|.+|. ....|.| .++.++|++||
T Consensus 82 i~~f~~~~~~~~~y~g~~~~~~~l~~f~ 109 (109)
T cd02993 82 ILFFPKNSRQPIKYPSEQRDVDSLLMFV 109 (109)
T ss_pred EEEEcCCCCCceeccCCCCCHHHHHhhC
Confidence 99997764 3334556 58999999985
|
APS reductase catalyzes the reduction of activated sulfate to sulfite, a key step in the biosynthesis of sulfur-containing metabolites. Sulfate is first activated by ATP sulfurylase, forming APS, which can be phosphorylated to 3'-phosphoadenosine-5'-phosphosulfate (PAPS). Depending on the organism, either APS or PAPS can be used for sulfate reduction. Prokaryotes and fungi use PAPS, whereas plants use both APS and PAPS. Since plant-type APS reductase uses glutathione (GSH) as its electron donor, the C-terminal domain may function like glutaredoxin, a GSH-dependent member of the TRX superfamily. The flow of reducing equivalents goes from GSH - C-terminal TRX domain - N-terminal reductase domain - APS. Plant-type APS red |
| >PRK14282 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.4e-14 Score=171.89 Aligned_cols=70 Identities=49% Similarity=0.887 Sum_probs=65.5
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC--hhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--PTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
..|||++|||+++||.+|||+|||+|+++||||+++. +.|+++|++|++||++|+||.+|+.||++|..+
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~ 74 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVG 74 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccc
Confidence 5799999999999999999999999999999999873 568899999999999999999999999998754
|
|
| >PRK14291 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.9e-14 Score=173.16 Aligned_cols=70 Identities=51% Similarity=0.884 Sum_probs=66.7
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
..|||++|||+++||.++||+|||+||++||||+++++.++++|++|++||++|+||.+|+.||.+|...
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~ 71 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAA 71 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccc
Confidence 4699999999999999999999999999999999988889999999999999999999999999998764
|
|
| >cd03005 PDI_a_ERp46 PDIa family, endoplasmic reticulum protein 46 (ERp46) subfamily; ERp46 is an ER-resident protein containing three redox active TRX domains | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.4e-14 Score=139.34 Aligned_cols=99 Identities=21% Similarity=0.429 Sum_probs=88.2
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCC--CceEEEEEECccchhhHhHcCccccCCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP--LGVGFFTVHVHNEQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~--~~v~~a~VDc~~~~~L~~k~gV~~~~PT 932 (1578)
++++|.++|++.+. +++++|.|||+||++|+.+.|.|+++++.+++ ..+.+++|||+.+..+|++|+|.+ +||
T Consensus 2 ~~~l~~~~f~~~~~----~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~-~Pt 76 (102)
T cd03005 2 VLELTEDNFDHHIA----EGNHFVKFFAPWCGHCKRLAPTWEQLAKKFNNENPSVKIAKVDCTQHRELCSEFQVRG-YPT 76 (102)
T ss_pred eeECCHHHHHHHhh----cCCEEEEEECCCCHHHHHhCHHHHHHHHHHhccCCcEEEEEEECCCChhhHhhcCCCc-CCE
Confidence 46789999999873 23599999999999999999999999999976 249999999999999999999997 999
Q ss_pred EEEEcCCccccccCCCCCHHHHHHHH
Q psy12972 933 IALLTDGRTSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 933 l~lf~~G~~~~y~~G~~s~~~L~~fi 958 (1578)
+++|++|+....+.|.++.++|.+||
T Consensus 77 ~~~~~~g~~~~~~~G~~~~~~l~~~i 102 (102)
T cd03005 77 LLLFKDGEKVDKYKGTRDLDSLKEFV 102 (102)
T ss_pred EEEEeCCCeeeEeeCCCCHHHHHhhC
Confidence 99999998776677999999998875
|
Yeast complementation studies show that ERp46 can substitute for protein disulfide isomerase (PDI) function in vivo. It has been detected in many tissues, however, transcript and protein levels do not correlate in all tissues, suggesting regulation at a posttranscriptional level. An identical protein, named endoPDI, has been identified as an endothelial PDI that is highly expressed in the endothelium of tumors and hypoxic lesions. It has a protective effect on cells exposed to hypoxia. |
| >PRK14279 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.7e-14 Score=173.68 Aligned_cols=68 Identities=46% Similarity=0.733 Sum_probs=64.9
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGT 703 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~ 703 (1578)
..|||++|||+++||.+|||+|||+||++||||+++ ++.|.++|++|++||++|+||++|+.||++|.
T Consensus 8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~ 76 (392)
T PRK14279 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRR 76 (392)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhh
Confidence 479999999999999999999999999999999997 56789999999999999999999999999985
|
|
| >KOG1234|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.5e-14 Score=159.74 Aligned_cols=95 Identities=20% Similarity=0.276 Sum_probs=88.7
Q ss_pred hhcCC-CCCChhHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCChhhccccccccceeeeeeceeee----CCCEEEEEEe
Q psy12972 111 MVSLD-HVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQSMV----TDEALGIKLH 185 (1578)
Q Consensus 111 ls~r~-d~~p~~~~~~l~~Lqd~~p~~~~~~~~~~~~~~lg~~~~~~F~~f~~~PiasASi~QVh~----~g~~vavKv~ 185 (1578)
||-.+ .++|+...+.|++.++.+-.||..++.+++..++|.+|.+-|++||+.|.|+|||||||| +|.+||||||
T Consensus 2 LSiQD~~ll~p~l~qi~erVrqsAd~MP~~Ql~~vm~~~lG~nW~~Kf~~fd~~P~AaASIGQVHrArl~~g~eVavKiQ 81 (363)
T KOG1234|consen 2 LSIQDGSLLPPTLGQILERVRQSADFMPPKQLEPVMWGELGGNWAQKFSSFDDGPFAAASIGQVHRARLADGPEVAVKIQ 81 (363)
T ss_pred cccccCCccCHHHHHHHHHhcCccccCChhhhhHHHhhhhchhHHHHHHhhccCccccccHHHHHHHHhcCCCeeeeecC
Confidence 45544 589999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCCchhhHHhhHHHHHhhcc
Q psy12972 186 EFHEATNERPDHEFHEATNE 205 (1578)
Q Consensus 186 ~p~v~~~i~~Dl~~~~~~~~ 205 (1578)
||||.+.|++|+..|-++..
T Consensus 82 YPGva~sI~SD~~nl~~lLn 101 (363)
T KOG1234|consen 82 YPGVARSIDSDANNLSRLLN 101 (363)
T ss_pred CCchhhhccCcHHHHHHHHh
Confidence 99999999999997776653
|
|
| >cd03001 PDI_a_P5 PDIa family, P5 subfamily; composed of eukaryotic proteins similar to human P5, a PDI-related protein with a domain structure of aa'b (where a and a' are redox active TRX domains and b is a redox inactive TRX-like domain) | Back alignment and domain information |
|---|
Probab=99.48 E-value=7.4e-14 Score=138.00 Aligned_cols=100 Identities=25% Similarity=0.412 Sum_probs=88.3
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++++++++|.+.+.+. +++++|.||++||++|+++.|.|.++++.+.+. +.++.+||++++++|++++|.+ +||++
T Consensus 2 v~~l~~~~~~~~i~~~--~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~-~~~~~id~~~~~~~~~~~~i~~-~P~~~ 77 (103)
T cd03001 2 VVELTDSNFDKKVLNS--DDVWLVEFYAPWCGHCKNLAPEWKKAAKALKGI-VKVGAVDADVHQSLAQQYGVRG-FPTIK 77 (103)
T ss_pred eEEcCHHhHHHHHhcC--CCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-ceEEEEECcchHHHHHHCCCCc-cCEEE
Confidence 4578899999887544 567999999999999999999999999999875 9999999999999999999998 99999
Q ss_pred EEcCC-ccccccCCCCCHHHHHHHH
Q psy12972 935 LLTDG-RTSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 935 lf~~G-~~~~y~~G~~s~~~L~~fi 958 (1578)
+|.+| .....+.|.++.++|++|+
T Consensus 78 ~~~~~~~~~~~~~g~~~~~~l~~~~ 102 (103)
T cd03001 78 VFGAGKNSPQDYQGGRTAKAIVSAA 102 (103)
T ss_pred EECCCCcceeecCCCCCHHHHHHHh
Confidence 99988 3344456889999999997
|
Like PDI, P5 is located in the endoplasmic reticulum (ER) and displays both isomerase and chaperone activities, which are independent of each other. Compared to PDI, the isomerase and chaperone activities of P5 are lower. The first cysteine in the CXXC motif of both redox active domains in P5 is necessary for isomerase activity. The P5 gene was first isolated as an amplified gene from a hydroxyurea-resistant hamster cell line. The zebrafish P5 homolog has been implicated to play a critical role in establishing left/right asymmetries in the embryonic midline. Some members of this subfamily are P5-like proteins containing only one redox active TRX domain. |
| >PRK14277 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.9e-14 Score=172.21 Aligned_cols=70 Identities=50% Similarity=0.836 Sum_probs=65.7
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
..|||++|||+++||.+|||+|||+||++||||+++ ++.++++|++|++||++|+|+.+|+.||.+|..+
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~ 74 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAA 74 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhcccc
Confidence 369999999999999999999999999999999997 4678999999999999999999999999998753
|
|
| >cd02956 ybbN ybbN protein family; ybbN is a hypothetical protein containing a redox-inactive TRX-like domain | Back alignment and domain information |
|---|
Probab=99.47 E-value=9.8e-14 Score=135.64 Aligned_cols=95 Identities=17% Similarity=0.301 Sum_probs=84.4
Q ss_pred cccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCcc
Q psy12972 862 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRT 941 (1578)
Q Consensus 862 nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~ 941 (1578)
+|++.+.+ +.+++++|.||++||++|+.+.|.++++++.+.+. +.+++|||+.++++|++|+|.+ +||+++|++|+.
T Consensus 2 ~f~~~i~~-~~~~~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~l~~~~~i~~-~Pt~~~~~~g~~ 78 (96)
T cd02956 2 NFQQVLQE-STQVPVVVDFWAPRSPPSKELLPLLERLAEEYQGQ-FVLAKVNCDAQPQIAQQFGVQA-LPTVYLFAAGQP 78 (96)
T ss_pred ChHHHHHh-cCCCeEEEEEECCCChHHHHHHHHHHHHHHHhCCc-EEEEEEeccCCHHHHHHcCCCC-CCEEEEEeCCEE
Confidence 56666643 23679999999999999999999999999999875 9999999999999999999998 999999999988
Q ss_pred ccccCCCCCHHHHHHHHH
Q psy12972 942 SFFKEPSFSVQKMVEFFR 959 (1578)
Q Consensus 942 ~~y~~G~~s~~~L~~fi~ 959 (1578)
...+.|..+.++|.+|+.
T Consensus 79 ~~~~~g~~~~~~l~~~l~ 96 (96)
T cd02956 79 VDGFQGAQPEEQLRQMLD 96 (96)
T ss_pred eeeecCCCCHHHHHHHhC
Confidence 777779999999998873
|
Its gene has been sequenced from several gammaproteobacteria and actinobacteria. |
| >TIGR02349 DnaJ_bact chaperone protein DnaJ | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.8e-14 Score=169.50 Aligned_cols=97 Identities=42% Similarity=0.770 Sum_probs=76.8
Q ss_pred CCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCCCCccc
Q psy12972 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDSASRNF 717 (1578)
Q Consensus 638 d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~~~~~~ 717 (1578)
|||++|||+++||.++||+|||+++++||||+++.+.+.++|++|++||++|+|+.+|+.||.+|..+...+....+.++
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~~~~ 80 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGF 80 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCCCCc
Confidence 79999999999999999999999999999999987788999999999999999999999999998764321111001111
Q ss_pred CC---CCCCCcccccccCCC
Q psy12972 718 HN---HMYNPFDDVFSEGFN 734 (1578)
Q Consensus 718 ~~---~~~~~f~~~F~~~Fg 734 (1578)
.. ..|.+|.++|+.+||
T Consensus 81 ~~~~~~~~~~~~~~f~~~fg 100 (354)
T TIGR02349 81 NGFDIGFFGDFGDIFGDFFG 100 (354)
T ss_pred CCccccCcCchhhhHHHHhc
Confidence 11 134556777877776
|
This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. |
| >PRK10767 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=7.8e-14 Score=169.17 Aligned_cols=70 Identities=47% Similarity=0.852 Sum_probs=65.8
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
..|||++|||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||++|+|+.+|+.||.+|..+
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 73 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAA 73 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccc
Confidence 479999999999999999999999999999999987 4678899999999999999999999999998754
|
|
| >PTZ00037 DnaJ_C chaperone protein; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.9e-14 Score=171.75 Aligned_cols=67 Identities=40% Similarity=0.775 Sum_probs=63.0
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
..|+|++|||+++||.+|||+|||+||++|||||+++ .++|++|++||++|+||.+|+.||.+|..+
T Consensus 27 ~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~---~e~F~~i~~AYevLsD~~kR~~YD~~G~~~ 93 (421)
T PTZ00037 27 NEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD---PEKFKEISRAYEVLSDPEKRKIYDEYGEEG 93 (421)
T ss_pred chhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch---HHHHHHHHHHHHHhccHHHHHHHhhhcchh
Confidence 5799999999999999999999999999999999864 589999999999999999999999998763
|
|
| >PRK14283 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=8.9e-14 Score=168.84 Aligned_cols=70 Identities=46% Similarity=0.823 Sum_probs=66.8
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
..|+|++|||+++||.+|||+|||+||++||||+|+++.|+++|++|++||++|+|+.+|+.||++|..+
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g 73 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAG 73 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHHHHhhhcccc
Confidence 5799999999999999999999999999999999988889999999999999999999999999998753
|
|
| >PRK09381 trxA thioredoxin; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.5e-13 Score=136.09 Aligned_cols=104 Identities=21% Similarity=0.481 Sum_probs=93.7
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+++++.++|.+.+.+. +++++|.||+|||++|+.+.|.|+++++.+.+. +.++.|||+.++.++++|+|.+ +||++
T Consensus 5 v~~~~~~~~~~~v~~~--~~~vvv~f~~~~C~~C~~~~p~~~~l~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~-~Pt~~ 80 (109)
T PRK09381 5 IIHLTDDSFDTDVLKA--DGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQNPGTAPKYGIRG-IPTLL 80 (109)
T ss_pred ceeeChhhHHHHHhcC--CCeEEEEEECCCCHHHHHHhHHHHHHHHHhCCC-cEEEEEECCCChhHHHhCCCCc-CCEEE
Confidence 5678889999877643 789999999999999999999999999999875 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|++|+......|..+.+.|..|+...+
T Consensus 81 ~~~~G~~~~~~~G~~~~~~l~~~i~~~~ 108 (109)
T PRK09381 81 LFKNGEVAATKVGALSKGQLKEFLDANL 108 (109)
T ss_pred EEeCCeEEEEecCCCCHHHHHHHHHHhc
Confidence 9999998877778899999999998764
|
|
| >PRK14284 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.2e-13 Score=168.13 Aligned_cols=69 Identities=48% Similarity=0.895 Sum_probs=65.1
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.|||++|||+++||.+|||+|||++|++||||+++ ++.++++|++|++||++|+|+.+|+.||++|..+
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g 70 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDG 70 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccc
Confidence 48999999999999999999999999999999997 4678999999999999999999999999998753
|
|
| >cd02999 PDI_a_ERp44_like PDIa family, endoplasmic reticulum protein 44 (ERp44)-like subfamily; composed of uncharacterized PDI-like eukaryotic proteins containing only one redox active TRX (a) domain with a CXXS motif, similar to ERp44 | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.8e-13 Score=135.20 Aligned_cols=84 Identities=19% Similarity=0.406 Sum_probs=76.5
Q ss_pred CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc-cchhhHhHcCccccCCcEEEEcCCccccccCCCC
Q psy12972 871 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-NEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSF 949 (1578)
Q Consensus 871 s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~-~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~ 949 (1578)
..+++++|.|||+||++|+.+.|.|+++++.+.+ +.+++||++ .++.+|++|+|.+ +||+++|++| ....+.|.+
T Consensus 16 ~~g~~vlV~F~a~WC~~C~~~~p~l~~la~~~~~--~~~~~vd~~~~~~~l~~~~~V~~-~PT~~lf~~g-~~~~~~G~~ 91 (100)
T cd02999 16 NREDYTAVLFYASWCPFSASFRPHFNALSSMFPQ--IRHLAIEESSIKPSLLSRYGVVG-FPTILLFNST-PRVRYNGTR 91 (100)
T ss_pred cCCCEEEEEEECCCCHHHHhHhHHHHHHHHHhcc--CceEEEECCCCCHHHHHhcCCee-cCEEEEEcCC-ceeEecCCC
Confidence 3578999999999999999999999999999974 789999998 7899999999998 9999999999 556677999
Q ss_pred CHHHHHHHH
Q psy12972 950 SVQKMVEFF 958 (1578)
Q Consensus 950 s~~~L~~fi 958 (1578)
+.++|.+|+
T Consensus 92 ~~~~l~~f~ 100 (100)
T cd02999 92 TLDSLAAFY 100 (100)
T ss_pred CHHHHHhhC
Confidence 999999985
|
CXXS is still a redox active motif; however, the mixed disulfide formed with the substrate is more stable than those formed by CXXC motif proteins. PDI-related proteins are usually involved in the oxidative protein folding in the ER by acting as catalysts and folding assistants. ERp44 is involved in thiol-mediated retention in the ER. |
| >KOG1163|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.7e-13 Score=146.93 Aligned_cols=134 Identities=22% Similarity=0.304 Sum_probs=106.0
Q ss_pred cccccccceEEEEEE-ecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAV-TKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~-l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++|||||||-+|.|. ..+|++|||||-...++. |. +..|+
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--------------------pq-------------------L~yEs 61 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--------------------PQ-------------------LLYES 61 (341)
T ss_pred EeecCCchhheeeeeeccCCceEEEEeecccCCC--------------------cc-------------------hhHHH
Confidence 789999999999998 679999999998655442 11 13455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCc--eEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSST--RVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~--~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+-.+.++ +.+-+|.+.+-.+.+ +||||+.+ |.+|.|+.......++.+.+.-..-+++ ++.+|..||+|
T Consensus 62 kvY~iL~------~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiH 134 (341)
T KOG1163|consen 62 KVYRILQ------GGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIH 134 (341)
T ss_pred HHHHHhc------cCCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhcccc
Confidence 5555544 356789988766544 58999999 9999999988888888887766555555 78899999999
Q ss_pred cCCCCCCCCCC------eeEEecCCchhhhh
Q psy12972 564 ADPHSGNDVNT------WLYPVDLGDKFRLV 588 (1578)
Q Consensus 564 ~DpHPGNilv~------~v~liDfG~~~~l~ 588 (1578)
||+||.|+|.+ ++++||||.+-+.-
T Consensus 135 RDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 135 RDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred ccCCccceeeccccccceEEEEeccchhhhc
Confidence 99999999944 69999999875543
|
|
| >cd02995 PDI_a_PDI_a'_C PDIa family, C-terminal TRX domain (a') subfamily; composed of the C-terminal redox active a' domains of PDI, ERp72, ERp57 (or ERp60) and EFP1 | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.4e-13 Score=134.44 Aligned_cols=100 Identities=19% Similarity=0.407 Sum_probs=87.2
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCC-CceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP-LGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~-~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+.++|.++|++.+... +++++|.||+|||++|+.+.|.|+++++.+++ ..+.++++||+++ +++..+++.+ +||+
T Consensus 2 v~~l~~~~f~~~i~~~--~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~id~~~~-~~~~~~~~~~-~Pt~ 77 (104)
T cd02995 2 VKVVVGKNFDEVVLDS--DKDVLVEFYAPWCGHCKALAPIYEELAEKLKGDDNVVIAKMDATAN-DVPSEFVVDG-FPTI 77 (104)
T ss_pred eEEEchhhhHHHHhCC--CCcEEEEEECCCCHHHHHHhhHHHHHHHHhcCCCCEEEEEEeCcch-hhhhhccCCC-CCEE
Confidence 3578999999877544 58999999999999999999999999999987 3499999999987 6899999997 9999
Q ss_pred EEEcCCc--cccccCCCCCHHHHHHHH
Q psy12972 934 ALLTDGR--TSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 934 ~lf~~G~--~~~y~~G~~s~~~L~~fi 958 (1578)
++|++|. ....+.|..+.++|.+||
T Consensus 78 ~~~~~~~~~~~~~~~g~~~~~~l~~fi 104 (104)
T cd02995 78 LFFPAGDKSNPIKYEGDRTLEDLIKFI 104 (104)
T ss_pred EEEcCCCcCCceEccCCcCHHHHHhhC
Confidence 9999887 445566999999999885
|
PDI, ERp72 and ERp57 are endoplasmic reticulum (ER)-resident eukaryotic proteins involved in oxidative protein folding. They are oxidases, catalyzing the formation of disulfide bonds of newly synthesized polypeptides in the ER. They also exhibit reductase activity in acting as isomerases to correct any non-native disulfide bonds, as well as chaperone activity to prevent protein aggregation and facilitate the folding of newly synthesized proteins. PDI and ERp57 have the abb'a' domain structure (where a and a' are redox active TRX domains while b and b' are redox inactive TRX-like domains). PDI also contains an acidic region (c domain) after the a' domain that is absent in ERp57. ERp72 has an additional a domain at the N-terminus (a"abb'a' domain structure). ERp57 interacts with the lectin chaperones, calnexin and calreticu |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.8e-13 Score=150.40 Aligned_cols=134 Identities=22% Similarity=0.223 Sum_probs=92.6
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
++++.|.+|+|+.+.. +++.||||+.+|..... .- +..++...-=|++||+
T Consensus 37 ~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~---~~-------------------------~~~~f~~g~~~e~Ea~ 87 (232)
T PRK10359 37 KVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRT---ER-------------------------FLKSFVKGDYYENLIV 87 (232)
T ss_pred EEecCCCceEEEEEec-CCCcEEEEEechhcCch---HH-------------------------HHHhhhhhHHHHHHHH
Confidence 8899999999999766 68899999999876432 00 0001111122589999
Q ss_pred HHHHHHHhhCCCCCeeecEEe---eC-----CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcC
Q psy12972 489 NAERCSKDLAHLPYVYIPRIL---WD-----KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTG 560 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~---~~-----~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G 560 (1578)
++.++.+. ++..|..+ .+ ++++.+|||||++|.+|.++.. ++ +++...+. ..+.++|..|
T Consensus 88 ~l~rL~~~-----GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~-~~~~~~i~-~~l~~lH~~g 155 (232)
T PRK10359 88 QTDRVRSE-----GLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----IS-EDVKAKIK-ASIESLHQHG 155 (232)
T ss_pred HHHHHHHC-----CCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-----cc-HHHHHHHH-HHHHHHHHcC
Confidence 99999643 44445444 22 3577899999999999987632 22 23333333 3588999999
Q ss_pred ccccCCCCCCCCCC--eeEEecCCc
Q psy12972 561 FVHADPHSGNDVNT--WLYPVDLGD 583 (1578)
Q Consensus 561 ~vH~DpHPGNilv~--~v~liDfG~ 583 (1578)
++|||||||||+++ .+++||||.
T Consensus 156 i~H~Dikp~Nili~~~gi~liDfg~ 180 (232)
T PRK10359 156 MVSGDPHKGNFIVSKNGLRIIDLSG 180 (232)
T ss_pred CccCCCChHHEEEeCCCEEEEECCC
Confidence 99999999999964 255566554
|
|
| >PHA02278 thioredoxin-like protein | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.8e-13 Score=135.59 Aligned_cols=93 Identities=12% Similarity=0.171 Sum_probs=80.5
Q ss_pred cccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccc----hhhHhHcCccccCCcEEE
Q psy12972 860 HWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE----QGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 860 ~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~----~~L~~k~gV~~~~PTl~l 935 (1578)
.++|.+.+ +.+++++|.|||||||+|+.+.|.++++++.+... +.+++||++.+ ++++++|+|.+ .||+++
T Consensus 4 ~~~~~~~i---~~~~~vvV~F~A~WCgpCk~m~p~l~~l~~~~~~~-~~~~~vdvd~~~~d~~~l~~~~~I~~-iPT~i~ 78 (103)
T PHA02278 4 LVDLNTAI---RQKKDVIVMITQDNCGKCEILKSVIPMFQESGDIK-KPILTLNLDAEDVDREKAVKLFDIMS-TPVLIG 78 (103)
T ss_pred HHHHHHHH---hCCCcEEEEEECCCCHHHHhHHHHHHHHHhhhcCC-ceEEEEECCccccccHHHHHHCCCcc-ccEEEE
Confidence 35566666 45899999999999999999999999999886544 78999999986 68999999998 999999
Q ss_pred EcCCccccccCCCCCHHHHHHH
Q psy12972 936 LTDGRTSFFKEPSFSVQKMVEF 957 (1578)
Q Consensus 936 f~~G~~~~y~~G~~s~~~L~~f 957 (1578)
|++|+.+....|..+.+.|.++
T Consensus 79 fk~G~~v~~~~G~~~~~~l~~~ 100 (103)
T PHA02278 79 YKDGQLVKKYEDQVTPMQLQEL 100 (103)
T ss_pred EECCEEEEEEeCCCCHHHHHhh
Confidence 9999988777788888887765
|
|
| >TIGR01126 pdi_dom protein disulfide-isomerase domain | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.5e-13 Score=132.61 Aligned_cols=100 Identities=29% Similarity=0.497 Sum_probs=89.0
Q ss_pred eccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCc-eEEEEEECccchhhHhHcCccccCCcEEEE
Q psy12972 858 TTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG-VGFFTVHVHNEQGLARRLGVGSQLPQIALL 936 (1578)
Q Consensus 858 Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~-v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf 936 (1578)
|+.++|++.+. .+++++|.||++||++|+.+.|.|+++++.+++.+ +.++.+||++++.+|++|+|.+ +|++++|
T Consensus 1 l~~~~~~~~~~---~~~~~~i~f~~~~C~~c~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~-~P~~~~~ 76 (102)
T TIGR01126 1 LTASNFDDIVL---SNKDVLVEFYAPWCGHCKNLAPEYEKLAKELKGDPDIVLAKVDATAEKDLASRFGVSG-FPTIKFF 76 (102)
T ss_pred CchhhHHHHhc---cCCcEEEEEECCCCHHHHhhChHHHHHHHHhccCCceEEEEEEccchHHHHHhCCCCc-CCEEEEe
Confidence 46778888773 57899999999999999999999999999998753 9999999999999999999998 9999999
Q ss_pred cCCccccccCCCCCHHHHHHHHHhh
Q psy12972 937 TDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 937 ~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
.+|+....+.|..+.++|..|+.++
T Consensus 77 ~~~~~~~~~~g~~~~~~l~~~i~~~ 101 (102)
T TIGR01126 77 PKGKKPVDYEGGRDLEAIVEFVNEK 101 (102)
T ss_pred cCCCcceeecCCCCHHHHHHHHHhc
Confidence 8887555566999999999999875
|
This model describes a domain of eukaryotic protein disulfide isomerases, generally found in two copies. The high cutoff for total score reflects the expectation of finding both copies. The domain is similar to thioredoxin but the redox-active disulfide region motif is APWCGHCK. |
| >KOG0719|consensus | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.4e-14 Score=151.55 Aligned_cols=121 Identities=40% Similarity=0.618 Sum_probs=91.3
Q ss_pred ccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC---ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCC
Q psy12972 635 VSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN---DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQD 711 (1578)
Q Consensus 635 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~---~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~ 711 (1578)
...|+|++|||.++|+..+|++||++++++||||+++ ...++++|+++++||+||+|.++|+.||..|..+..++
T Consensus 12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~idd~~~-- 89 (264)
T KOG0719|consen 12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSIDDESG-- 89 (264)
T ss_pred cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCccc--
Confidence 3569999999999999999999999999999999995 35688999999999999999999999999988863221
Q ss_pred CCCcccCCCCCCCcccccccCCCCCCcccccchhhccccccccccccccCCccCccceecccccc
Q psy12972 712 SASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDW 776 (1578)
Q Consensus 712 ~~~~~~~~~~~~~f~~~F~~~Fg~~f~~~~~~~~~k~~l~~~nf~~~v~~~~~~~~~lV~FYApw 776 (1578)
.-..++-++|...|. ..++.+++ +|...+.+++..+.-|+..|--.
T Consensus 90 --------d~~~~~~e~~~~iyk-~VteedIe----------ef~a~Y~gSEeEk~Dl~~~Y~k~ 135 (264)
T KOG0719|consen 90 --------DIDEDWLEFWRAIYK-KVTEEDIE----------EFEANYQGSEEEKKDLLKLYNKF 135 (264)
T ss_pred --------hhhhHHHHHHHHHHh-hcccccHH----------HHHHHhcccHHHHHHHHHHHHhc
Confidence 111123333333333 22333332 78888888888887777666543
|
|
| >PRK10266 curved DNA-binding protein CbpA; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.7e-13 Score=161.89 Aligned_cols=69 Identities=36% Similarity=0.693 Sum_probs=65.4
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
..|||++|||++++|.+|||+|||+|+++||||+++++.++++|++|++||++|+|+.+|+.||.+|..
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~ 71 (306)
T PRK10266 3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQH 71 (306)
T ss_pred cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHhhcc
Confidence 469999999999999999999999999999999998888999999999999999999999999998753
|
|
| >cd02997 PDI_a_PDIR PDIa family, PDIR subfamily; composed of proteins similar to human PDIR (for Protein Disulfide Isomerase Related) | Back alignment and domain information |
|---|
Probab=99.41 E-value=4e-13 Score=132.89 Aligned_cols=100 Identities=22% Similarity=0.382 Sum_probs=87.9
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCC-CceEEEEEECcc--chhhHhHcCccccCC
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP-LGVGFFTVHVHN--EQGLARRLGVGSQLP 931 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~-~~v~~a~VDc~~--~~~L~~k~gV~~~~P 931 (1578)
+++++..+|++.+ +.+++++|.||++||++|+++.|.+.++++.+.+ ..+.++.+||+. +..+|++++|.+ +|
T Consensus 2 ~~~l~~~~~~~~~---~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~i~~-~P 77 (104)
T cd02997 2 VVHLTDEDFRKFL---KKEKHVLVMFYAPWCGHCKKMKPEFTKAATELKEDGKGVLAAVDCTKPEHDALKEEYNVKG-FP 77 (104)
T ss_pred eEEechHhHHHHH---hhCCCEEEEEECCCCHHHHHhCHHHHHHHHHHhhCCceEEEEEECCCCccHHHHHhCCCcc-cc
Confidence 4578888998877 3456999999999999999999999999999873 238999999998 899999999997 99
Q ss_pred cEEEEcCCccccccCCCCCHHHHHHHH
Q psy12972 932 QIALLTDGRTSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 932 Tl~lf~~G~~~~y~~G~~s~~~L~~fi 958 (1578)
|+++|++|+....+.|..+.+++.+|+
T Consensus 78 t~~~~~~g~~~~~~~g~~~~~~l~~~l 104 (104)
T cd02997 78 TFKYFENGKFVEKYEGERTAEDIIEFM 104 (104)
T ss_pred EEEEEeCCCeeEEeCCCCCHHHHHhhC
Confidence 999999998776777999999999885
|
PDIR is composed of three redox active TRX (a) domains and an N-terminal redox inactive TRX-like (b) domain. Similar to PDI, it is involved in oxidative protein folding in the endoplasmic reticulum (ER) through its isomerase and chaperone activities. These activities are lower compared to PDI, probably due to PDIR acting only on a subset of proteins. PDIR is preferentially expressed in cells actively secreting proteins and its expression is induced by stress. Similar to PDI, the isomerase and chaperone activities of PDIR are independent; CXXC mutants lacking isomerase activity retain chaperone activity. |
| >PRK14300 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.7e-13 Score=165.90 Aligned_cols=69 Identities=38% Similarity=0.743 Sum_probs=65.8
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.|||++|||+++||.+|||+|||+++++||||+++++.++++|++|++||++|+|+.+|+.||.+|..+
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~ 71 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDA 71 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccc
Confidence 699999999999999999999999999999999987788999999999999999999999999998753
|
|
| >PRK14295 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.4e-13 Score=163.96 Aligned_cols=69 Identities=48% Similarity=0.894 Sum_probs=64.6
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccc----cCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDL----FGTT 704 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~----~~~~ 704 (1578)
..|||++|||+++||.+|||+|||+|+++||||+++ ++.++++|++|++||++|+||.+|+.||+ +|..
T Consensus 8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~ 81 (389)
T PRK14295 8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNG 81 (389)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhccc
Confidence 369999999999999999999999999999999987 46789999999999999999999999998 7764
|
|
| >PRK14292 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.8e-13 Score=164.44 Aligned_cols=69 Identities=54% Similarity=0.919 Sum_probs=66.3
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
+|+|++|||+++||.++||+|||+|+++||||+++++.++++|++|++||++|+||.+|+.||.+|..+
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~ 70 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAP 70 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcc
Confidence 699999999999999999999999999999999988889999999999999999999999999999764
|
|
| >TIGR02187 GlrX_arch Glutaredoxin-like domain protein | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.5e-12 Score=142.88 Aligned_cols=186 Identities=13% Similarity=0.184 Sum_probs=124.5
Q ss_pred CCcEEEEEEc---CCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccc-cccCCC
Q psy12972 873 TTPHLILFYS---DWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTS-FFKEPS 948 (1578)
Q Consensus 873 ~~~~LV~Fya---pwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~-~y~~G~ 948 (1578)
+...++.|++ +||++|+.+.|.++++++.+.+..+.++.+|.+++++++++|+|.+ +||+++|++|+.. ..+.|.
T Consensus 19 ~~~~i~~f~~~~a~wC~~C~~~~p~l~~la~~~~~~~i~~v~vd~~~~~~l~~~~~V~~-~Pt~~~f~~g~~~~~~~~G~ 97 (215)
T TIGR02187 19 NPVEIVVFTDNDKEGCQYCKETEQLLEELSEVSPKLKLEIYDFDTPEDKEEAEKYGVER-VPTTIILEEGKDGGIRYTGI 97 (215)
T ss_pred CCeEEEEEcCCCCCCCCchHHHHHHHHHHHhhCCCceEEEEecCCcccHHHHHHcCCCc-cCEEEEEeCCeeeEEEEeec
Confidence 4555777988 9999999999999999999864336677777779999999999998 9999999999876 356688
Q ss_pred CCHHHHHHHHHhhCCC-ccccccccccHHHHhhcccCCCcEEEEEe-c---cCCchHHHHHHHHhhcCCCeEEEEEEccc
Q psy12972 949 FSVQKMVEFFRLKLPY-KLIVPLSATNVDAFLDNWREDNKVHALLF-Q---RSLPVRLRYLINAFKHRTTIVFGVIVYDQ 1023 (1578)
Q Consensus 949 ~s~~~L~~fi~~~lp~-~vv~~it~~~~~~fl~~~~~~~~~~VlfF-~---~~~~~~~~~~~~a~~~~~~v~Fg~v~~~~ 1023 (1578)
.+.+++.+|+...+.- .....++.++.+.+.+.. +.+.+.+| . .........+.......+.+.|..++ .
T Consensus 98 ~~~~~l~~~i~~~~~~~~~~~~L~~~~~~~l~~~~---~pv~I~~F~a~~C~~C~~~~~~l~~l~~~~~~i~~~~vD--~ 172 (215)
T TIGR02187 98 PAGYEFAALIEDIVRVSQGEPGLSEKTVELLQSLD---EPVRIEVFVTPTCPYCPYAVLMAHKFALANDKILGEMIE--A 172 (215)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHhcC---CCcEEEEEECCCCCCcHHHHHHHHHHHHhcCceEEEEEe--C
Confidence 8889999999866421 112334444444444322 33344434 2 22222222222222224567777664 4
Q ss_pred CCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhh
Q psy12972 1024 EDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITD 1071 (1578)
Q Consensus 1024 ~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~ 1071 (1578)
..++++.++|+|.+ .||+++++++.. ..+..+...+.+|+.
T Consensus 173 ~~~~~~~~~~~V~~-vPtl~i~~~~~~------~~G~~~~~~l~~~l~ 213 (215)
T TIGR02187 173 NENPDLAEKYGVMS-VPKIVINKGVEE------FVGAYPEEQFLEYIL 213 (215)
T ss_pred CCCHHHHHHhCCcc-CCEEEEecCCEE------EECCCCHHHHHHHHH
Confidence 47888999999987 679999865421 123334455666654
|
This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different. |
| >PRK14281 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.1e-13 Score=164.84 Aligned_cols=69 Identities=45% Similarity=0.864 Sum_probs=65.1
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.|||++|||+++||.+|||+|||+|+++||||+++ ++.|+++|++|++||++|+|+.+|+.||.+|..+
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~ 72 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAG 72 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchh
Confidence 69999999999999999999999999999999997 4678899999999999999999999999998753
|
|
| >PRK14290 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.7e-13 Score=162.76 Aligned_cols=69 Identities=46% Similarity=0.840 Sum_probs=64.8
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC--hhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--PTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.|||++|||+++||.+|||+|||+|+++||||+++. ..|.++|++|++||++|+|+.+|+.||.+|..+
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~ 73 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVD 73 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcc
Confidence 699999999999999999999999999999999974 268899999999999999999999999999764
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.5e-12 Score=148.86 Aligned_cols=154 Identities=22% Similarity=0.186 Sum_probs=98.1
Q ss_pred cccccccceEEEEEE--ecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIAAASLAQVFRAV--TKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~--l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
++||.|++|+||+|+ ..+|++||||+.+++.......+. +. ......-....+.... .+..+..|
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~---------~~~~~~~E 100 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDR--YV--DGDFRFKYRKINPRKL---------VRLWAEKE 100 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhh--hc--ccchhhccCCCCHHHH---------HHHHHHHH
Confidence 589999999999998 679999999999986532111110 00 0000000000011111 12346889
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHH---HHHHHHHHHHHHHHHcC-cc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLAD---VDRKLFTAFAEQIFQTG-FV 562 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~---v~~~l~~~~l~~i~~~G-~v 562 (1578)
++|+.++... .+.+|+++.. ++.+|||||++|..+.... +.....+... ++..++. .+.++|..| ++
T Consensus 101 ~~~L~~L~~~-----~i~~p~~~~~--~~~~lV~E~~~g~~L~~~~-~~~~~~~~~~~~~i~~qi~~-~l~~LH~~g~ii 171 (237)
T smart00090 101 FRNLQRLYEA-----GVPVPKPIAW--RRNVLVMEFIGGDGLPAPR-LKDVEPEEEEEFELYDDILE-EMRKLYKEGELV 171 (237)
T ss_pred HHHHHHHHhc-----CCCCCeeeEe--cCceEEEEEecCCcccccc-cccCCcchHHHHHHHHHHHH-HHHHHHhcCCEE
Confidence 9999999742 5778888853 4679999999998876542 1222333332 3333333 277899999 99
Q ss_pred ccCCCCCCCCCC--eeEEecCCch
Q psy12972 563 HADPHSGNDVNT--WLYPVDLGDK 584 (1578)
Q Consensus 563 H~DpHPGNilv~--~v~liDfG~~ 584 (1578)
|+|+||+||++. .++++|||..
T Consensus 172 H~Dikp~NIli~~~~i~LiDFg~a 195 (237)
T smart00090 172 HGDLSEYNILVHDGKVVIIDVSQS 195 (237)
T ss_pred eCCCChhhEEEECCCEEEEEChhh
Confidence 999999999963 5777777754
|
|
| >cd02948 TRX_NDPK TRX domain, TRX and NDP-kinase (NDPK) fusion protein family; most members of this group are fusion proteins which contain one redox active TRX domain containing a CXXC motif and three NDPK domains, and are characterized as intermediate chains (ICs) of axonemal outer arm dynein | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.5e-13 Score=131.76 Aligned_cols=97 Identities=18% Similarity=0.249 Sum_probs=84.1
Q ss_pred eccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEc
Q psy12972 858 TTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLT 937 (1578)
Q Consensus 858 Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~ 937 (1578)
-|.++|++.+ +.+++++|.|||+||++|+.+.|.++++++.+++..+.|+.+|++ +.+++++|+|++ +||+++|+
T Consensus 5 ~~~~~~~~~i---~~~~~vvv~F~a~wC~~Ck~~~p~l~~~~~~~~~~~~~~~~vd~d-~~~~~~~~~v~~-~Pt~~~~~ 79 (102)
T cd02948 5 NNQEEWEELL---SNKGLTVVDVYQEWCGPCKAVVSLFKKIKNELGDDLLHFATAEAD-TIDTLKRYRGKC-EPTFLFYK 79 (102)
T ss_pred cCHHHHHHHH---ccCCeEEEEEECCcCHhHHHHhHHHHHHHHHcCCCcEEEEEEeCC-CHHHHHHcCCCc-CcEEEEEE
Confidence 3567788865 347899999999999999999999999999997655899999999 778999999998 99999999
Q ss_pred CCccccccCCCCCHHHHHHHHHh
Q psy12972 938 DGRTSFFKEPSFSVQKMVEFFRL 960 (1578)
Q Consensus 938 ~G~~~~y~~G~~s~~~L~~fi~~ 960 (1578)
+|+......| .+.+.|.++|.+
T Consensus 80 ~g~~~~~~~G-~~~~~~~~~i~~ 101 (102)
T cd02948 80 NGELVAVIRG-ANAPLLNKTITE 101 (102)
T ss_pred CCEEEEEEec-CChHHHHHHHhh
Confidence 9998877767 477888888864
|
Dyneins are molecular motors that generate force against microtubules to produce cellular movement, and are divided into two classes: axonemal and cytoplasmic. They are supramolecular complexes consisting of three protein groups classified according to size: dynein heavy, intermediate and light chains. Axonemal dyneins form two structures, the inner and outer arms, which are attached to doublet microtubules throughout the cilia and flagella. The human homolog is the sperm-specific Sptrx-2, presumed to be a component of the human sperm axoneme architecture. Included in this group is another human protein, TRX-like protein 2, a smaller fusion protein containing one TRX and one NDPK domain, which |
| >PRK14293 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.9e-13 Score=163.09 Aligned_cols=69 Identities=43% Similarity=0.850 Sum_probs=66.1
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.|||++|||+++||.+|||+|||+++++||||+++++.++++|++|++||++|+||.+|+.||.+|..+
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g 71 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAG 71 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHHHHhhccccc
Confidence 699999999999999999999999999999999988889999999999999999999999999998753
|
|
| >KOG0716|consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.8e-13 Score=149.45 Aligned_cols=73 Identities=45% Similarity=0.867 Sum_probs=68.3
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC-hhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND-PTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.....|.|++||++++|+.++|||+||+|++++|||++++ |++.++|++||+||+||+||.+|..||.+|..+
T Consensus 27 ~~~~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~ 100 (279)
T KOG0716|consen 27 DVIRLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELG 100 (279)
T ss_pred ccchhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHH
Confidence 3446789999999999999999999999999999999986 899999999999999999999999999998874
|
|
| >PLN02309 5'-adenylylsulfate reductase | Back alignment and domain information |
|---|
Probab=99.37 E-value=7.3e-13 Score=161.96 Aligned_cols=107 Identities=20% Similarity=0.422 Sum_probs=93.3
Q ss_pred EEEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc-cchhhHh-HcCccccCC
Q psy12972 854 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-NEQGLAR-RLGVGSQLP 931 (1578)
Q Consensus 854 ~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~-~~~~L~~-k~gV~~~~P 931 (1578)
.++++|.+||++.+...+.+++++|.||||||++|+.+.|.|+++|+.+.+.++.|++|||+ .+..+|+ +|+|++ ||
T Consensus 346 ~Vv~Lt~~nfe~ll~~~~~~k~vlV~FyApWC~~Cq~m~p~~e~LA~~~~~~~V~f~kVD~d~~~~~la~~~~~I~~-~P 424 (457)
T PLN02309 346 NVVALSRAGIENLLKLENRKEPWLVVLYAPWCPFCQAMEASYEELAEKLAGSGVKVAKFRADGDQKEFAKQELQLGS-FP 424 (457)
T ss_pred CcEECCHHHHHHHHHhhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHhccCCeEEEEEECCCcchHHHHhhCCCce-ee
Confidence 45789999999987544568999999999999999999999999999998777999999999 8889997 699997 99
Q ss_pred cEEEEcCCc--cccccCCCCCHHHHHHHHHhh
Q psy12972 932 QIALLTDGR--TSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 932 Tl~lf~~G~--~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
||++|++|. .+.|.+|.++.++|++||+..
T Consensus 425 Til~f~~g~~~~v~Y~~~~R~~~~L~~fv~~~ 456 (457)
T PLN02309 425 TILLFPKNSSRPIKYPSEKRDVDSLLSFVNSL 456 (457)
T ss_pred EEEEEeCCCCCeeecCCCCcCHHHHHHHHHHh
Confidence 999998775 345555689999999999753
|
|
| >cd02998 PDI_a_ERp38 PDIa family, endoplasmic reticulum protein 38 (ERp38) subfamily; composed of proteins similar to the P5-like protein first isolated from alfalfa, which contains two redox active TRX (a) domains at the N-terminus, like human P5, and a C-terminal domain with homology to the C-terminal domain of ERp29, unlike human P5 | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.5e-12 Score=128.86 Aligned_cols=100 Identities=24% Similarity=0.461 Sum_probs=86.5
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC-ceEEEEEECcc-chhhHhHcCccccCCcE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHVHN-EQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~-~v~~a~VDc~~-~~~L~~k~gV~~~~PTl 933 (1578)
.+++.++|++.+... +++++|.||++||++|+.+.|.|.++++.++.. ++.++.+||+. ++.+|++++|.+ +|++
T Consensus 3 ~~l~~~~~~~~~~~~--~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~i~~-~P~~ 79 (105)
T cd02998 3 VELTDSNFDKVVGDD--KKDVLVEFYAPWCGHCKNLAPEYEKLAAVFANEDDVVIAKVDADEANKDLAKKYGVSG-FPTL 79 (105)
T ss_pred EEcchhcHHHHhcCC--CCcEEEEEECCCCHHHHhhChHHHHHHHHhCCCCCEEEEEEECCCcchhhHHhCCCCC-cCEE
Confidence 568889999866433 569999999999999999999999999999732 49999999999 899999999998 9999
Q ss_pred EEEcCC-ccccccCCCCCHHHHHHHH
Q psy12972 934 ALLTDG-RTSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 934 ~lf~~G-~~~~y~~G~~s~~~L~~fi 958 (1578)
++|.+| .....+.|.++.++|.+|+
T Consensus 80 ~~~~~~~~~~~~~~g~~~~~~l~~~i 105 (105)
T cd02998 80 KFFPKGSTEPVKYEGGRDLEDLVKFV 105 (105)
T ss_pred EEEeCCCCCccccCCccCHHHHHhhC
Confidence 999877 4555566889999999885
|
The cDNA clone of this protein (named G1) was isolated from an alfalfa cDNA library by screening with human protein disulfide isomerase (PDI) cDNA. The G1 protein is constitutively expressed in all major organs of the plant and its expression is induced by treatment with tunicamycin, indicating that it may be a glucose-regulated protein. The G1 homolog in the eukaryotic social amoeba Dictyostelium discoideum is also described as a P5-like protein, which is located in the endoplasmic reticulum (ER) despite the absence of an ER-retrieval signal. G1 homologs from Aspergillus niger and Neurospora crassa have also been characterized, and are named TIGA and ER |
| >KOG0721|consensus | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.5e-13 Score=141.08 Aligned_cols=94 Identities=33% Similarity=0.615 Sum_probs=80.4
Q ss_pred cchhhhHHHHHHhhhhhhh----hccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC-hhHHHHHHHHHHHHH
Q psy12972 613 MNFNLIMLWYTFLLNVLFI----NCAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND-PTAQEKFLQLTEAYN 687 (1578)
Q Consensus 613 ~~~~l~~lw~~~~l~~~~~----~~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~ 687 (1578)
.+.-++.+|..+++...-+ ......|||+|||+++++|..|||+|||+|+.++||||++. .+.++.|..|++||+
T Consensus 71 ~~i~lv~~W~v~~fL~y~i~~~~~~~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~ 150 (230)
T KOG0721|consen 71 RKVFLVVGWAVIAFLIYKIMNSRRERQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQ 150 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHH
Confidence 4455567887777666433 23445799999999999999999999999999999999987 667788999999999
Q ss_pred HcCCHHHHHhccccCCCCC
Q psy12972 688 ILSDAERRKQYDLFGTTDG 706 (1578)
Q Consensus 688 ~L~d~~~R~~yD~~~~~~~ 706 (1578)
.|+|+..|..|..+|+.++
T Consensus 151 aLTD~~sreN~ekYG~PDG 169 (230)
T KOG0721|consen 151 ALTDKKSRENWEKYGNPDG 169 (230)
T ss_pred HhcchhhHHHHHHhCCCCC
Confidence 9999999999999999975
|
|
| >cd03000 PDI_a_TMX3 PDIa family, TMX3 subfamily; composed of eukaryotic proteins similar to human TMX3, a TRX related transmembrane protein containing one redox active TRX domain at the N-terminus and a classical ER retrieval sequence for type I transmembrane proteins at the C-terminus | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.6e-12 Score=129.33 Aligned_cols=95 Identities=23% Similarity=0.359 Sum_probs=81.7
Q ss_pred ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC--ceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 861 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 861 ~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~--~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
++|++. ..+++++|.||++||++|+.+.|.|+++++.+++. ++.++.+||+.++.+|++++|.+ +||+++|++
T Consensus 7 ~~~~~~----~~~~~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~I~~-~Pt~~l~~~ 81 (104)
T cd03000 7 DSFKDV----RKEDIWLVDFYAPWCGHCKKLEPVWNEVGAELKSSGSPVRVGKLDATAYSSIASEFGVRG-YPTIKLLKG 81 (104)
T ss_pred hhhhhh----ccCCeEEEEEECCCCHHHHhhChHHHHHHHHHHhcCCcEEEEEEECccCHhHHhhcCCcc-ccEEEEEcC
Confidence 566663 34679999999999999999999999999999643 38999999999999999999998 999999987
Q ss_pred CccccccCCCCCHHHHHHHHHhh
Q psy12972 939 GRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 939 G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
|.... +.|..+.+.|.+|+++.
T Consensus 82 ~~~~~-~~G~~~~~~l~~~~~~~ 103 (104)
T cd03000 82 DLAYN-YRGPRTKDDIVEFANRV 103 (104)
T ss_pred CCcee-ecCCCCHHHHHHHHHhh
Confidence 75544 56889999999999763
|
The TMX3 transcript is found in a variety of tissues with the highest levels detected in skeletal muscle and the heart. In vitro, TMX3 showed oxidase activity albeit slightly lower than that of protein disulfide isomerase. |
| >KOG0624|consensus | Back alignment and domain information |
|---|
Probab=99.36 E-value=9e-13 Score=148.25 Aligned_cols=72 Identities=42% Similarity=0.672 Sum_probs=65.9
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCCh----hHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDP----TAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
-+..+|||+||||.++|+..||-||||++|.+||||...++ .|+.+|.-|..|-++|+||++|+.+|+.-.+
T Consensus 390 qs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnGeDP 465 (504)
T KOG0624|consen 390 QSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNGEDP 465 (504)
T ss_pred HhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCCCCC
Confidence 56689999999999999999999999999999999988763 4889999999999999999999999986554
|
|
| >PRK10996 thioredoxin 2; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.2e-12 Score=137.32 Aligned_cols=102 Identities=23% Similarity=0.418 Sum_probs=92.0
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++.++..+|++.+ +.+++++|.||++||++|+.+.|.++++++.+.+. +.+++||++++++++++|+|.+ +||++
T Consensus 37 ~i~~~~~~~~~~i---~~~k~vvv~F~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~~~~l~~~~~V~~-~Ptli 111 (139)
T PRK10996 37 VINATGETLDKLL---QDDLPVVIDFWAPWCGPCRNFAPIFEDVAAERSGK-VRFVKVNTEAERELSARFRIRS-IPTIM 111 (139)
T ss_pred CEEcCHHHHHHHH---hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-eEEEEEeCCCCHHHHHhcCCCc-cCEEE
Confidence 3457888898866 44789999999999999999999999999998765 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
+|++|+......|..+.+.|.+|+.+.
T Consensus 112 i~~~G~~v~~~~G~~~~e~l~~~l~~~ 138 (139)
T PRK10996 112 IFKNGQVVDMLNGAVPKAPFDSWLNEA 138 (139)
T ss_pred EEECCEEEEEEcCCCCHHHHHHHHHHh
Confidence 999999887778999999999999865
|
|
| >cd02954 DIM1 Dim1 family; Dim1 is also referred to as U5 small nuclear ribonucleoprotein particle (snRNP)-specific 15kD protein | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.5e-13 Score=131.95 Aligned_cols=91 Identities=13% Similarity=0.322 Sum_probs=77.0
Q ss_pred ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCc
Q psy12972 861 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGR 940 (1578)
Q Consensus 861 ~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~ 940 (1578)
++|++.+.. +.+++++|.|||+||++|+.+.|.++++|.++.+. +.|++||++++++++++|+|.+ .||+++|++|+
T Consensus 3 ~~~~~~i~~-~~~~~vVV~F~A~WCgpCk~m~P~le~la~~~~~~-v~f~kVDvD~~~~la~~~~V~~-iPTf~~fk~G~ 79 (114)
T cd02954 3 WAVDQAILS-EEEKVVVIRFGRDWDPVCMQMDEVLAKIAEDVSNF-AVIYLVDIDEVPDFNKMYELYD-PPTVMFFFRNK 79 (114)
T ss_pred HHHHHHHhc-cCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCc-eEEEEEECCCCHHHHHHcCCCC-CCEEEEEECCE
Confidence 345555532 24789999999999999999999999999999876 8999999999999999999998 99999999999
Q ss_pred cccccCCCCCHHHH
Q psy12972 941 TSFFKEPSFSVQKM 954 (1578)
Q Consensus 941 ~~~y~~G~~s~~~L 954 (1578)
.+....|..+...|
T Consensus 80 ~v~~~~G~~~~~~~ 93 (114)
T cd02954 80 HMKIDLGTGNNNKI 93 (114)
T ss_pred EEEEEcCCCCCceE
Confidence 87666665554433
|
It is a component of U5 snRNP, which pre-assembles with U4/U6 snRNPs to form a [U4/U6:U5] tri-snRNP complex required for pre-mRNA splicing. Dim1 interacts with multiple splicing-associated proteins, suggesting that it functions at multiple control points in the splicing of pre-mRNA as part of a large spliceosomal complex involving many protein-protein interactions. U5 snRNP contains seven core proteins (common to all snRNPs) and nine U5-specific proteins, one of which is Dim1. Dim1 adopts a thioredoxin fold but does not contain the redox active CXXC motif. It is essential for G2/M phase transition, as a consequence to its role in pre-mRNA splicing. |
| >TIGR00424 APS_reduc 5'-adenylylsulfate reductase, thioredoxin-independent | Back alignment and domain information |
|---|
Probab=99.36 E-value=9.3e-13 Score=161.02 Aligned_cols=106 Identities=21% Similarity=0.401 Sum_probs=90.9
Q ss_pred EEEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccch-hhH-hHcCccccCC
Q psy12972 854 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQ-GLA-RRLGVGSQLP 931 (1578)
Q Consensus 854 ~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~-~L~-~k~gV~~~~P 931 (1578)
.+++||.+||++.+...+.+++++|.||||||++|+.+.|.|+++|+.+++.++.|++|||+.+. .++ ++|+|.+ ||
T Consensus 352 ~Vv~L~~~nf~~~v~~~~~~k~VLV~FyApWC~~Ck~m~P~~eelA~~~~~~~v~~~kVdvD~~~~~~~~~~~~I~~-~P 430 (463)
T TIGR00424 352 NVVSLSRPGIENLLKLEERKEAWLVVLYAPWCPFCQAMEASYLELAEKLAGSGVKVAKFRADGDQKEFAKQELQLGS-FP 430 (463)
T ss_pred CeEECCHHHHHHHHhhhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHhccCCcEEEEEECCCCccHHHHHHcCCCc-cc
Confidence 56789999999987434568899999999999999999999999999998767999999999764 454 7899997 99
Q ss_pred cEEEEcCCc--cccccCCCCCHHHHHHHHHh
Q psy12972 932 QIALLTDGR--TSFFKEPSFSVQKMVEFFRL 960 (1578)
Q Consensus 932 Tl~lf~~G~--~~~y~~G~~s~~~L~~fi~~ 960 (1578)
||++|++|. .+.|..|.++.++|+.||+.
T Consensus 431 Tii~Fk~g~~~~~~Y~~g~R~~e~L~~Fv~~ 461 (463)
T TIGR00424 431 TILFFPKHSSRPIKYPSEKRDVDSLMSFVNL 461 (463)
T ss_pred eEEEEECCCCCceeCCCCCCCHHHHHHHHHh
Confidence 999999885 34555568999999999964
|
This enzyme, involved in the assimilation of inorganic sulfate, is closely related to the thioredoxin-dependent PAPS reductase of Bacteria (CysH) and Saccharomyces cerevisiae. However, it has its own C-terminal thioredoxin-like domain and is not thioredoxin-dependent. Also, it has a substrate preference for 5'-adenylylsulfate (APS) over 3'-phosphoadenylylsulfate (PAPS) so the pathway does not require an APS kinase (CysC) to convert APS to PAPS. Arabidopsis thaliana appears to have three isozymes, all able to complement E. coli CysH mutants (even in backgrounds lacking thioredoxin or APS kinase) but likely localized to different compartments in Arabidopsis. |
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.4e-12 Score=143.15 Aligned_cols=142 Identities=22% Similarity=0.306 Sum_probs=92.6
Q ss_pred EEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCC------CCCHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q psy12972 419 VFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYP------KFDFQWVINELKVPLEQELDFLNEGRNAER 492 (1578)
Q Consensus 419 VhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~------~~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r 492 (1578)
||.|...+|++||||+-+.+... ++. ..+....-.. ..+...+.. .--++|++|+.+
T Consensus 2 Vy~~~~~~~~~~a~K~~r~~~~~-Fk~-------~~~y~~~~~r~~~~~~~~~~~~~~~---------~~~~~E~~~L~~ 64 (188)
T PF01163_consen 2 VYHAIDPDGEEVAVKIYRTGRTS-FKR-------RKKYRDYDYRFKKYRHKSSWRYLIR---------EWAKKEFRNLKR 64 (188)
T ss_dssp EEEEEECTTEEEEEEEE-S---S-S-H-------HHHHTTTSTTSTTC--G--CHHHHH---------HHHHHHHHHHHH
T ss_pred EEEEECCCCCEEEEEEeccCceE-EEE-------eeeeecccchhcccccccCHHHHHH---------HHHHHHHHHHHH
Confidence 89999999999999999987543 221 1122221111 011222222 344789999999
Q ss_pred HHHhhCCCCCeeecEEeeCCCCceEEEEeccC--CCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCCCC
Q psy12972 493 CSKDLAHLPYVYIPRILWDKSSTRVLTTEFID--GVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHSGN 570 (1578)
Q Consensus 493 ~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~--G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHPGN 570 (1578)
+.+ .++.||+|+ ..++++||||||+ |.++..+.........+.++...+++.+..+++..|++|+||++.|
T Consensus 65 l~~-----~Gv~vP~p~--~~~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~N 137 (188)
T PF01163_consen 65 LYE-----AGVPVPKPY--DYNRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYN 137 (188)
T ss_dssp CCC-----TT-SS--EE--EEETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTS
T ss_pred HHH-----CCccCCcEE--EEeCCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCCChhh
Confidence 864 358899999 4579999999999 9999887554322456788888888888889999999999999999
Q ss_pred CCCC--eeEEecCCch
Q psy12972 571 DVNT--WLYPVDLGDK 584 (1578)
Q Consensus 571 ilv~--~v~liDfG~~ 584 (1578)
||++ ++++||||..
T Consensus 138 Ilv~~~~~~iIDf~qa 153 (188)
T PF01163_consen 138 ILVDDGKVYIIDFGQA 153 (188)
T ss_dssp EEEETTCEEE--GTTE
T ss_pred EEeecceEEEEecCcc
Confidence 9964 5888888854
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.2e-12 Score=139.30 Aligned_cols=153 Identities=21% Similarity=0.201 Sum_probs=95.2
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
++||+|++|+||+|+..+|++||||+.+|+.......+...+ ....... ...++..+. .+....|.+
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~---------~~~~~~e~~ 69 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRT---GDYRFGR-KKSNWRYLS---------RLWAEKEFR 69 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhH---HHHHhcc-CCcchhhhh---------hHHHHHHHH
Confidence 579999999999999889999999999987544322221111 0111100 011111111 122356667
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCc-----CCchhhHhhcCCCHHHHHHHHHHHHHHHHHH-cCcc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVK-----ISDKEGLLEKGFSLADVDRKLFTAFAEQIFQ-TGFV 562 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~-----l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~-~G~v 562 (1578)
++.++... .+.+|+++. +...+|||||++|.. +.+... . .....++..++.+ +..+|. .|++
T Consensus 70 ~l~~l~~~-----~~~~~~~~~--~~~~~lv~e~~~g~~~~~~~l~~~~~---~-~~~~~~~~~~~~~-l~~lh~~~~iv 137 (187)
T cd05119 70 NLKRLYEA-----GVPVPKPID--LNRHVLVMEFIGGDGIPAPRLKDVRL---L-EDPEELYDQILEL-MRKLYREAGLV 137 (187)
T ss_pred HHHHHHHc-----CCCCCceEe--cCCCEEEEEEeCCCCccChhhhhhhh---c-ccHHHHHHHHHHH-HHHHhhccCcC
Confidence 77777542 366888874 456799999999943 333211 0 2233444444443 567787 9999
Q ss_pred ccCCCCCCCCCC--eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT--WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~--~v~liDfG~~~~ 586 (1578)
|+|+||+||++. .++++|||...+
T Consensus 138 H~Dl~p~Nili~~~~~~liDfg~a~~ 163 (187)
T cd05119 138 HGDLSEYNILVDDGKVYIIDVPQAVE 163 (187)
T ss_pred cCCCChhhEEEECCcEEEEECccccc
Confidence 999999999964 477788876643
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein [] | Back alignment and domain information |
|---|
Probab=99.35 E-value=5.3e-13 Score=120.74 Aligned_cols=62 Identities=56% Similarity=0.989 Sum_probs=58.9
Q ss_pred CCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChh--HHHHHHHHHHHHHHcCCHHHHHhcc
Q psy12972 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPT--AQEKFLQLTEAYNILSDAERRKQYD 699 (1578)
Q Consensus 638 d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~--a~~~f~~i~~Ay~~L~d~~~R~~yD 699 (1578)
|||++|||+++++.++||++|+++++++|||+++... +.+.|..|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 5899999999999999999999999999999987655 8899999999999999999999998
|
Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A .... |
| >TIGR01068 thioredoxin thioredoxin | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.2e-12 Score=126.48 Aligned_cols=100 Identities=23% Similarity=0.493 Sum_probs=87.9
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
+.++|.+.+.+ .+++++|.||++||++|+.+.|.++++++.+.+. +.++.|||+.+..++++|+|.+ +||+++|++
T Consensus 2 ~~~~~~~~~~~--~~~~vvi~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~-~P~~~~~~~ 77 (101)
T TIGR01068 2 TDANFDETIAS--SDKPVLVDFWAPWCGPCKMIAPILEELAKEYEGK-VKFVKLNVDENPDIAAKYGIRS-IPTLLLFKN 77 (101)
T ss_pred CHHHHHHHHhh--cCCcEEEEEECCCCHHHHHhCHHHHHHHHHhcCC-eEEEEEECCCCHHHHHHcCCCc-CCEEEEEeC
Confidence 55677776643 3679999999999999999999999999998765 9999999999999999999997 999999999
Q ss_pred CccccccCCCCCHHHHHHHHHhhC
Q psy12972 939 GRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 939 G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|+......|..+.+.|.+|+++.+
T Consensus 78 g~~~~~~~g~~~~~~l~~~l~~~~ 101 (101)
T TIGR01068 78 GKEVDRSVGALPKAALKQLINKNL 101 (101)
T ss_pred CcEeeeecCCCCHHHHHHHHHhhC
Confidence 987777778899999999998653
|
Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. |
| >KOG0595|consensus | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.3e-12 Score=149.77 Aligned_cols=134 Identities=22% Similarity=0.233 Sum_probs=85.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-||+||+|.||+|+++ +|..||||-..-. .+..+..+.+..|+-.
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~-----------------------------~l~~k~~e~L~~Ei~i---- 62 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKK-----------------------------KLNKKLVELLLSEIKI---- 62 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEEeeeehhh-----------------------------ccCHHHHHHHHHHHHH----
Confidence 33999999999999976 7899999954211 1112223334344333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHH---HHHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTA---FAEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~---~l~~i~~~G~vH~ 564 (1578)
++.+. |...|.+-.+.+. .+.-+|||||++|+.|+++. ...+.-++..++...+. .++.++..++|||
T Consensus 63 --Lkel~----H~nIV~l~d~~~~-~~~i~lVMEyC~gGDLs~yi--~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHR 133 (429)
T KOG0595|consen 63 --LKELK----HPNIVRLLDCIED-DDFIYLVMEYCNGGDLSDYI--RRRGRLPEATARHFMQQLASALQFLHENNIIHR 133 (429)
T ss_pred --HHhcC----CcceeeEEEEEec-CCeEEEEEEeCCCCCHHHHH--HHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 33322 3334555555532 33457999999999999984 44433334444433322 2788999999999
Q ss_pred CCCCCCCCCCe---------eEEecCCch
Q psy12972 565 DPHSGNDVNTW---------LYPVDLGDK 584 (1578)
Q Consensus 565 DpHPGNilv~~---------v~liDfG~~ 584 (1578)
|+||.|||+.. +++-|||.+
T Consensus 134 DLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 134 DLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred cCCcceEEeccCCCCCCCceEEecccchh
Confidence 99999999642 456666654
|
|
| >PTZ00341 Ring-infected erythrocyte surface antigen; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=7.5e-13 Score=166.56 Aligned_cols=71 Identities=32% Similarity=0.550 Sum_probs=67.4
Q ss_pred ccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 635 VSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 635 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
...++|++|||+++||..+||+|||+||++||||+++++.|..+|++|++||++|+||.+|+.||.+|..+
T Consensus 571 ~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~G 641 (1136)
T PTZ00341 571 PDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYDG 641 (1136)
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhccccc
Confidence 46799999999999999999999999999999999987788899999999999999999999999998875
|
|
| >KOG0715|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.2e-12 Score=152.15 Aligned_cols=72 Identities=43% Similarity=0.808 Sum_probs=67.8
Q ss_pred cccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 634 AVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 634 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
....|||++|||+++|+..|||+||++|+++||||.++++++.++|++|.+|||+|+|+++|..||.++..+
T Consensus 40 ~~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~ 111 (288)
T KOG0715|consen 40 ISKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQ 111 (288)
T ss_pred CCCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc
Confidence 334499999999999999999999999999999999999999999999999999999999999999988764
|
|
| >cd02961 PDI_a_family Protein Disulfide Isomerase (PDIa) family, redox active TRX domains; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.2e-12 Score=125.83 Aligned_cols=98 Identities=28% Similarity=0.457 Sum_probs=84.8
Q ss_pred eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhC-CCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELS-PLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~-~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
+++.++|.+.+. ..++++|.||++||++|+.+.|.|.++++.++ +.++.++.|||+.+..+|++|+|.+ +||+++
T Consensus 2 ~l~~~~~~~~i~---~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~-~Pt~~~ 77 (101)
T cd02961 2 ELTDDNFDELVK---DSKDVLVEFYAPWCGHCKALAPEYEKLAKELKGDGKVVVAKVDCTANNDLCSEYGVRG-YPTIKL 77 (101)
T ss_pred cccHHHHHHHHh---CCCcEEEEEECCCCHHHHhhhHHHHHHHHHhccCCceEEEEeeccchHHHHHhCCCCC-CCEEEE
Confidence 477888888773 34499999999999999999999999999995 3349999999999999999999997 999999
Q ss_pred EcCC-ccccccCCCCCHHHHHHHH
Q psy12972 936 LTDG-RTSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 936 f~~G-~~~~y~~G~~s~~~L~~fi 958 (1578)
|.+| .....+.|..+.++|.+|+
T Consensus 78 ~~~~~~~~~~~~g~~~~~~i~~~~ 101 (101)
T cd02961 78 FPNGSKEPVKYEGPRTLESLVEFI 101 (101)
T ss_pred EcCCCcccccCCCCcCHHHHHhhC
Confidence 9887 5556666888999998874
|
Members of this family include PDI and PDI-related proteins like ERp72, ERp57 (or ERp60), ERp44, P5, PDIR, ERp46 and the transmembrane PDIs. PDI, ERp57, ERp72, P5, PDIR and ERp46 are all oxidases, catalyzing the formation of disulfide bonds of newly synthesized polypeptides in the ER. They also exhibit reductase activity in acting as isomerases to correct any non-native disulfide bonds, as well as chaperone activity to prevent protein aggregation and facilitate the folding of newly synthesized proteins. These proteins usually contain multiple copies of a redox active TRX (a) domain containing a CXXC motif, and may also contain one or more redox inactive TRX-like (b) domains. Only one a domain is required for the oxidase function but multiple copies |
| >cd02965 HyaE HyaE family; HyaE is also called HupG and HoxO | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.2e-12 Score=126.96 Aligned_cols=94 Identities=19% Similarity=0.173 Sum_probs=85.4
Q ss_pred eeccccccceecccCCCCcEEEEEEcCC--CcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDW--CFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~Fyapw--Cg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+++..||++.+ +.+++.+|.||++| |++|..+.|.++++|+++.+. +.|++||++.+++++.+|+|.+ .||++
T Consensus 14 ~~~~~~~~~~~---~~~~~~v~~f~~~~~~cp~c~~i~P~leela~e~~~~-v~f~kVdid~~~~la~~f~V~s-IPTli 88 (111)
T cd02965 14 RVDAATLDDWL---AAGGDLVLLLAGDPVRFPEVLDVAVVLPELLKAFPGR-FRAAVVGRADEQALAARFGVLR-TPALL 88 (111)
T ss_pred ccccccHHHHH---hCCCCEEEEecCCcccCcchhhhHhHHHHHHHHCCCc-EEEEEEECCCCHHHHHHcCCCc-CCEEE
Confidence 57889999776 55899999999997 999999999999999999876 8999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHH
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMV 955 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~ 955 (1578)
+|++|+......|..+.+++.
T Consensus 89 ~fkdGk~v~~~~G~~~~~e~~ 109 (111)
T cd02965 89 FFRDGRYVGVLAGIRDWDEYV 109 (111)
T ss_pred EEECCEEEEEEeCccCHHHHh
Confidence 999999887777888877664
|
They are proteins serving a critical role in the assembly of multimeric [NiFe] hydrogenases, the enzymes that catalyze the oxidation of molecular hydrogen to enable microorganisms to utilize hydrogen as the sole energy source. The E. coli HyaE protein is a chaperone that specifically interacts with the twin-arginine translocation (Tat) signal peptide of the [NiFe] hydrogenase-1 beta subunit precursor. Tat signal peptides target precursor proteins to the Tat protein export system, which facilitates the transport of fully folded proteins across the inner membrane. HyaE may be involved in regulating the traffic of [NiFe] hydrogenase-1 on the Tat transport pathway. |
| >PRK14289 chaperone protein DnaJ; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.9e-12 Score=157.89 Aligned_cols=70 Identities=47% Similarity=0.869 Sum_probs=65.7
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
..|+|++|||+++||.+|||+|||+||++||||+++ ++.++++|++|++||++|+||.+|+.||.+|..+
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~ 74 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAG 74 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccc
Confidence 479999999999999999999999999999999997 4678999999999999999999999999998753
|
|
| >cd02985 TRX_CDSP32 TRX family, chloroplastic drought-induced stress protein of 32 kD (CDSP32); CDSP32 is composed of two TRX domains, a C-terminal TRX domain which contains a redox active CXXC motif and an N-terminal TRX-like domain which contains an SXXS sequence instead of the redox active motif | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.8e-12 Score=127.42 Aligned_cols=96 Identities=15% Similarity=0.174 Sum_probs=80.1
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccch---hhHhHcCccccCCcEEE
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQ---GLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~---~L~~k~gV~~~~PTl~l 935 (1578)
|.++|++.+.+ ..+++++|.|||+||++|+.+.|.++++++.+. ++.|++||++++. +++++|+|++ +||+++
T Consensus 2 ~~~~~~~~i~~-~~~k~vvv~F~a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~d~~~~~~~l~~~~~V~~-~Pt~~~ 77 (103)
T cd02985 2 SVEELDEALKK-AKGRLVVLEFALKHSGPSVKIYPTMVKLSRTCN--DVVFLLVNGDENDSTMELCRREKIIE-VPHFLF 77 (103)
T ss_pred CHHHHHHHHHH-cCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CCEEEEEECCCChHHHHHHHHcCCCc-CCEEEE
Confidence 34567776643 347899999999999999999999999999993 3899999998874 8999999998 999999
Q ss_pred EcCCccccccCCCCCHHHHHHHHH
Q psy12972 936 LTDGRTSFFKEPSFSVQKMVEFFR 959 (1578)
Q Consensus 936 f~~G~~~~y~~G~~s~~~L~~fi~ 959 (1578)
|++|+....+.| ...++|.+-+.
T Consensus 78 ~~~G~~v~~~~G-~~~~~l~~~~~ 100 (103)
T cd02985 78 YKDGEKIHEEEG-IGPDELIGDVL 100 (103)
T ss_pred EeCCeEEEEEeC-CCHHHHHHHHH
Confidence 999998877767 55677776654
|
CDSP32 is a stress-inducible TRX, i.e., it acts as a TRX by reducing protein disulfides and is induced by environmental and oxidative stress conditions. It plays a critical role in plastid defense against oxidative damage, a role related to its function as a physiological electron donor to BAS1, a plastidic 2-cys peroxiredoxin. Plants lacking CDSP32 exhibit decreased photosystem II photochemical efficiencies and chlorophyll retention compared to WT controls, as well as an increased proportion of BAS1 in its overoxidized monomeric form. |
| >KOG0574|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.6e-13 Score=147.52 Aligned_cols=139 Identities=19% Similarity=0.236 Sum_probs=107.3
Q ss_pred HHHHHHHhCCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCH
Q psy12972 388 DQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDF 466 (1578)
Q Consensus 388 ~~~~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~ 466 (1578)
.++=+..|.++++|+|.-.+ -+|.||+|.||+|..+ +|+.||||-.. + ..|+
T Consensus 20 ~KLd~~sL~K~PEEVFDi~~--KLGEGSYGSV~KAIH~EsG~v~AIK~VP------V-------------------~sDL 72 (502)
T KOG0574|consen 20 FKLDSSALNKPPEEVFDIVG--KLGEGSYGSVHKAIHRESGHVLAIKKVP------V-------------------DTDL 72 (502)
T ss_pred cccChhhhcCChHHHHHHHH--HhcCCcchHHHHHHHhccCcEEEEEecC------c-------------------cchH
Confidence 34446788999999999984 5999999999999976 79999999432 2 2344
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcCCCHHHH
Q psy12972 467 QWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADV 544 (1578)
Q Consensus 467 ~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v 544 (1578)
+.++.|++ + ++++. .-+|-+.|..| .|+-++||||+-..+++|+..+++..++..++
T Consensus 73 QEIIKEIS--I------------MQQC~-------S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EI 131 (502)
T KOG0574|consen 73 QEIIKEIS--I------------MQQCK-------SKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEI 131 (502)
T ss_pred HHHHHHHH--H------------HHHcC-------CchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHH
Confidence 55555543 2 22221 22344555544 35678999999999999999999899999999
Q ss_pred HHHHHHHH--HHHHHHcCccccCCCCCCCCCC
Q psy12972 545 DRKLFTAF--AEQIFQTGFVHADPHSGNDVNT 574 (1578)
Q Consensus 545 ~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~ 574 (1578)
+..+-..+ ++.+|...-+|||++.||||+.
T Consensus 132 s~iL~~TLKGL~YLH~~~KIHRDIKAGNILLN 163 (502)
T KOG0574|consen 132 SAVLRDTLKGLQYLHDLKKIHRDIKAGNILLN 163 (502)
T ss_pred HHHHHHHHhHHHHHHHHHHHHhhcccccEEEc
Confidence 99888887 8999999999999999999954
|
|
| >KOG0691|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.5e-12 Score=149.53 Aligned_cols=71 Identities=44% Similarity=0.771 Sum_probs=67.8
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDG 706 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~ 706 (1578)
..|||.+|||+.++|.++|++|||+.+++||||||| +|.|.++|+.+.+||++|+|+..|..||.++..+-
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~ 75 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGS 75 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcc
Confidence 679999999999999999999999999999999998 69999999999999999999999999999988753
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.3e-11 Score=137.25 Aligned_cols=150 Identities=17% Similarity=0.166 Sum_probs=96.5
Q ss_pred CcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 408 ENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
.++|+.|++|+||+|..++|+.||||+.+++..... ......+... .. ..... .-..+.++..|.
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-----~~~~~~~~~~---~~-~~~~~------~~~~~~~~~~E~ 84 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFR-----KVKRKRDYLG---DR-KHASW------LYLSRLAAQKEF 84 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhh-----hhcchHHHHh---cc-ccchh------HHHhHHHHHHHH
Confidence 378999999999999998999999999877542110 0000000000 00 00000 112233566777
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPH 567 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpH 567 (1578)
..+..+... .+.+|.++. ....+|||||++|.++.++.. ......++..++.. +..+|..|++|+|+|
T Consensus 85 ~~l~~l~~~-----~i~v~~~~~--~~~~~lv~e~~~g~~L~~~~~----~~~~~~~~~~i~~~-l~~lh~~gi~H~Dl~ 152 (198)
T cd05144 85 AALKALYEE-----GFPVPKPID--WNRHAVVMEYIDGVELYRVRV----LEDPEEVLDEILEE-IVKAYKHGIIHGDLS 152 (198)
T ss_pred HHHHHHHHc-----CCCCCceee--cCCceEEEEEeCCcchhhccc----cccHHHHHHHHHHH-HHHHHHCCCCcCCCC
Confidence 777777542 356788875 356799999999999877532 12345566666554 467899999999999
Q ss_pred CCCCCCC---eeEEecCCch
Q psy12972 568 SGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 568 PGNilv~---~v~liDfG~~ 584 (1578)
|+||++. .++++|||..
T Consensus 153 p~Nill~~~~~~~liDfg~~ 172 (198)
T cd05144 153 EFNILVDDDEKIYIIDWPQM 172 (198)
T ss_pred cccEEEcCCCcEEEEECCcc
Confidence 9999964 3566666643
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >cd02957 Phd_like Phosducin (Phd)-like family; composed of Phd and Phd-like proteins (PhLP), characterized as cytosolic regulators of G protein functions | Back alignment and domain information |
|---|
Probab=99.29 E-value=3e-12 Score=129.47 Aligned_cols=89 Identities=15% Similarity=0.173 Sum_probs=78.4
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+.++|.++|.+.+...+.+++++|.||+|||++|+.+.|.++++|+.+.+ +.|++||++++ .++++|+|.+ +||++
T Consensus 6 v~~i~~~~f~~~i~~~~~~~~vvv~F~a~~c~~C~~l~~~l~~la~~~~~--v~f~~vd~~~~-~l~~~~~i~~-~Pt~~ 81 (113)
T cd02957 6 VREISSKEFLEEVTKASKGTRVVVHFYEPGFPRCKILDSHLEELAAKYPE--TKFVKINAEKA-FLVNYLDIKV-LPTLL 81 (113)
T ss_pred EEEEcHHHHHHHHHccCCCCEEEEEEeCCCCCcHHHHHHHHHHHHHHCCC--cEEEEEEchhh-HHHHhcCCCc-CCEEE
Confidence 45688899999886554458999999999999999999999999999864 79999999998 9999999997 99999
Q ss_pred EEcCCccccccCC
Q psy12972 935 LLTDGRTSFFKEP 947 (1578)
Q Consensus 935 lf~~G~~~~y~~G 947 (1578)
+|++|+.+....|
T Consensus 82 ~f~~G~~v~~~~G 94 (113)
T cd02957 82 VYKNGELIDNIVG 94 (113)
T ss_pred EEECCEEEEEEec
Confidence 9999987765545
|
Phd and PhLPs specifically bind G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane and impeding G protein-mediated signal transduction by inhibiting the formation of a functional G protein trimer (G protein alphabetagamma). Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-te |
| >cd02962 TMX2 TMX2 family; composed of proteins similar to human TMX2, a 372-amino acid TRX-related transmembrane protein, identified and characterized through the cloning of its cDNA from a human fetal library | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.7e-12 Score=134.75 Aligned_cols=92 Identities=20% Similarity=0.339 Sum_probs=79.0
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccc-----c
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGS-----Q 929 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~-----~ 929 (1578)
+.+++.++|++.+.. +.+++++|.||+|||++|+.+.|.|+++++.+.+.++.|++|||++++++|++|+|++ +
T Consensus 30 v~~l~~~~f~~~l~~-~~~~~vvV~Fya~wC~~Ck~l~p~l~~la~~~~~~~v~f~~VDvd~~~~la~~~~V~~~~~v~~ 108 (152)
T cd02962 30 IKYFTPKTLEEELER-DKRVTWLVEFFTTWSPECVNFAPVFAELSLKYNNNNLKFGKIDIGRFPNVAEKFRVSTSPLSKQ 108 (152)
T ss_pred cEEcCHHHHHHHHHh-cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCeEEEEEECCCCHHHHHHcCceecCCcCC
Confidence 456888999986643 3467999999999999999999999999999976569999999999999999999972 1
Q ss_pred CCcEEEEcCCccccccCC
Q psy12972 930 LPQIALLTDGRTSFFKEP 947 (1578)
Q Consensus 930 ~PTl~lf~~G~~~~y~~G 947 (1578)
+||+++|++|+.+....|
T Consensus 109 ~PT~ilf~~Gk~v~r~~G 126 (152)
T cd02962 109 LPTIILFQGGKEVARRPY 126 (152)
T ss_pred CCEEEEEECCEEEEEEec
Confidence 899999999997765554
|
It contains a TRX domain but the redox active CXXC motif is replaced with SXXC. Sequence analysis predicts that TMX2 may be a Type I membrane protein, with its C-terminal half protruding on the luminal side of the endoplasmic reticulum (ER). In addition to the TRX domain, transmembrane region and ER-retention signal, TMX2 also contains a Myb DNA-binding domain repeat signature and a dileucine motif in the tail. |
| >KOG1731|consensus | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.5e-12 Score=152.23 Aligned_cols=222 Identities=16% Similarity=0.248 Sum_probs=131.4
Q ss_pred EEEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCc--eEEEEEECc--cchhhHhHcCcccc
Q psy12972 854 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG--VGFFTVHVH--NEQGLARRLGVGSQ 929 (1578)
Q Consensus 854 ~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~--v~~a~VDc~--~~~~L~~k~gV~~~ 929 (1578)
.+++|+.++|...|..+ .+.++|+||++|||||.+++|.|+++|+.+++.. +.++.|||. .|..+|++|+|++
T Consensus 40 ~ii~Ld~~tf~~~v~~~--~~~~lVEFy~swCGhCr~FAPtfk~~A~dl~~W~~vv~vaaVdCA~~~N~~lCRef~V~~- 116 (606)
T KOG1731|consen 40 PIIELDVDTFNAAVFGS--RKAKLVEFYNSWCGHCRAFAPTFKKFAKDLEKWRPVVRVAAVDCADEENVKLCREFSVSG- 116 (606)
T ss_pred CeEEeehhhhHHHhccc--chhHHHHHHHhhhhhhhhcchHHHHHHHHHhcccceeEEEEeeccchhhhhhHhhcCCCC-
Confidence 36789999999999765 4789999999999999999999999999998765 899999996 4678999999998
Q ss_pred CCcEEEEcCCccc----cccCCCCCHHHHHHHHHhhC---------C--CccccccccccHHHHhhcccCCCcEEEEEec
Q psy12972 930 LPQIALLTDGRTS----FFKEPSFSVQKMVEFFRLKL---------P--YKLIVPLSATNVDAFLDNWREDNKVHALLFQ 994 (1578)
Q Consensus 930 ~PTl~lf~~G~~~----~y~~G~~s~~~L~~fi~~~l---------p--~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~ 994 (1578)
||||.+|+.+... ....|.....++.+.+.+.+ | |..-.......+.+.-++-.+....+.++|.
T Consensus 117 ~Ptlryf~~~~~~~~~G~~~~~~~~~~ei~~~l~~~la~~~~~~~~~~WP~f~pl~~~~~~~~l~~~~~~~~~yvAiv~e 196 (606)
T KOG1731|consen 117 YPTLRYFPPDSQNKTDGSDVSGPVIPSEIRDQLIRTLAEEDAQNRYPSWPNFDPLKDTTTLEELDEGISTTANYVAIVFE 196 (606)
T ss_pred CceeeecCCccccCcCCCcccCCcchhhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcchHHHHhcccccccceeEEEEe
Confidence 9999999654221 22235455666766665443 1 1111111222233222221011335566664
Q ss_pred cCCc-hHHHHHHHHhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccc-cCCCCchhhhhhhhc
Q psy12972 995 RSLP-VRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASIT-MNSIPVPTLQDITDN 1072 (1578)
Q Consensus 995 ~~~~-~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~-~~~l~~~~L~~fI~~ 1072 (1578)
..+. ..+..++....+ ..+....+.. .+.-.+++ +++ .+.|..++|+.+...+....+ ..+.....|.+++..
T Consensus 197 ~~~s~lg~~~~l~~l~~-~~v~vr~~~d--~q~~~~~~-l~~-~~~~~~llfrnG~~q~l~~~~~s~~~y~~~I~~~lg~ 271 (606)
T KOG1731|consen 197 TEPSDLGWANLLNDLPS-KQVGVRARLD--TQNFPLFG-LKP-DNFPLALLFRNGEQQPLWPSSSSRSAYVKKIDDLLGD 271 (606)
T ss_pred cCCcccHHHHHHhhccC-CCcceEEEec--chhccccc-cCC-CCchhhhhhcCCcccccccccccHHHHHHHHHHHhcC
Confidence 4333 333333333322 3333334411 12222222 333 346788889776665443221 111223456666654
Q ss_pred C---CCCCCcccCc
Q psy12972 1073 N---PYLTLPRISS 1083 (1578)
Q Consensus 1073 n---k~p~vpeLts 1083 (1578)
. ..|+++..+.
T Consensus 272 ~~~a~~pt~~p~~~ 285 (606)
T KOG1731|consen 272 KNEASGPTLHPITA 285 (606)
T ss_pred ccccCCCCcCcccc
Confidence 4 4566665553
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.3e-11 Score=136.08 Aligned_cols=138 Identities=17% Similarity=0.265 Sum_probs=98.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
++||.|+.|.||+|+. +|+.|+||+..|.....-..| . ......+.+|++
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~------------------------~-----~~~~~~~~~E~~ 51 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELD------------------------E-----RIRRERTRREAR 51 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHH------------------------H-----HHHHHHHHHHHH
Confidence 5789999999999986 888999999876432211111 0 011234577888
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHS 568 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHP 568 (1578)
++.++.. +.+.+|.++....+..+|+|||++|.+|.+.... .......++..+.. .+.++|..|++|+|+||
T Consensus 52 ~l~~l~~-----~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~--~~~~~~~i~~~i~~-~l~~lH~~~i~H~Dl~p 123 (211)
T PRK14879 52 IMSRARK-----AGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINS--NGMEELELSREIGR-LVGKLHSAGIIHGDLTT 123 (211)
T ss_pred HHHHHHH-----CCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHh--ccHHHHHHHHHHHH-HHHHHHhCCcccCCCCc
Confidence 8887753 3578888886666788999999999999887431 11122344444443 37789999999999999
Q ss_pred CCCCCC--eeEEecCCch
Q psy12972 569 GNDVNT--WLYPVDLGDK 584 (1578)
Q Consensus 569 GNilv~--~v~liDfG~~ 584 (1578)
+|||+. .++++|||..
T Consensus 124 ~Nil~~~~~~~liDf~~a 141 (211)
T PRK14879 124 SNMILSGGKIYLIDFGLA 141 (211)
T ss_pred ccEEEECCCEEEEECCcc
Confidence 999963 4777888754
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.25 E-value=3e-11 Score=133.10 Aligned_cols=150 Identities=18% Similarity=0.174 Sum_probs=101.6
Q ss_pred cccccccceEEEEEEecC-------CCEEEEEEecchhhhhHHHHHHHHHHHHHHH--h-hh---CCCCCHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKE-------GVEVAVKVQYIDLRERFVGDIATVQTLLRIA--G-FL---YPKFDFQWVINELKV 475 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~-------G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~--~-~~---~~~~~~~~~~~e~~~ 475 (1578)
-+|++|--|-||.|.-.+ |..|||||-+...... +. ..+.+ . ++ ..+.+...++..+.
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~F-k~-------~~~y~~~~~rf~~~~~k~~~~~~~~~wa- 73 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEF-KN-------RDKYIKDDYRFKDRFSKLNPRKIIRMWA- 73 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeE-cC-------hhhhccCCcccccCcCCCCHHHHHHHHH-
Confidence 479999999999998653 5899999999765432 11 11111 0 01 01134455555554
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCH---HHHHHHHHHHH
Q psy12972 476 PLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSL---ADVDRKLFTAF 552 (1578)
Q Consensus 476 ~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~---~~v~~~l~~~~ 552 (1578)
+.|++|+.++++. ++.||+|+. ..+++|||||+.|..+... .+.+...+. ..+...++..+
T Consensus 74 --------~kE~r~L~rl~~~-----Gv~vP~pi~--~~~~~lvME~Ig~~~~~~~-~Lkd~~~~~~~~~~i~~~i~~~l 137 (197)
T cd05146 74 --------EKEMHNLKRMQKA-----GIPCPEVVV--LKKHVLVMSFIGDDQVPAP-KLKDAKLNDEEMKNAYYQVLSMM 137 (197)
T ss_pred --------HHHHHHHHHHHHc-----CCCCCeEEE--ecCCEEEEEEcCCCCccch-hhhccccCHHHHHHHHHHHHHHH
Confidence 7899999999864 588999994 5899999999987433211 122222332 34455666666
Q ss_pred HHHHHHcCccccCCCCCCCCC--CeeEEecCCc
Q psy12972 553 AEQIFQTGFVHADPHSGNDVN--TWLYPVDLGD 583 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv--~~v~liDfG~ 583 (1578)
..++|..|++|+||+|.|||+ +.+++||||-
T Consensus 138 ~~l~H~~glVHGDLs~~NIL~~~~~v~iIDF~q 170 (197)
T cd05146 138 KQLYKECNLVHADLSEYNMLWHDGKVWFIDVSQ 170 (197)
T ss_pred HHHHHhCCeecCCCCHHHEEEECCcEEEEECCC
Confidence 666799999999999999996 4688888883
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG0718|consensus | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.6e-12 Score=147.70 Aligned_cols=72 Identities=40% Similarity=0.745 Sum_probs=66.6
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCCh----hHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDP----TAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGF 707 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~ 707 (1578)
..|+|.+|+++++||.+|||+|||++++.+||||..+| .|+++|+.|.+|||+|+||.+|+.||.+|..+..
T Consensus 8 e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~ 83 (546)
T KOG0718|consen 8 EIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK 83 (546)
T ss_pred hhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence 34899999999999999999999999999999998653 5889999999999999999999999999998764
|
|
| >cd02992 PDI_a_QSOX PDIa family, Quiescin-sulfhydryl oxidase (QSOX) subfamily; QSOX is a eukaryotic protein containing an N-terminal redox active TRX domain, similar to that of PDI, and a small C-terminal flavin adenine dinucleotide (FAD)-binding domain homologous to the yeast ERV1p protein | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.5e-11 Score=124.56 Aligned_cols=84 Identities=23% Similarity=0.433 Sum_probs=73.2
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC--ceEEEEEECcc--chhhHhHcCccccC
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHVHN--EQGLARRLGVGSQL 930 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~--~v~~a~VDc~~--~~~L~~k~gV~~~~ 930 (1578)
+++++.++|++.+... +++++|.||++||++|+.+.|.|+++++.+++. .+.++.|||+. ++++|++|+|++ +
T Consensus 3 v~~l~~~~f~~~i~~~--~~~vvV~f~a~wC~~C~~~~~~~~~la~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~-~ 79 (114)
T cd02992 3 VIVLDAASFNSALLGS--PSAWLVEFYASWCGHCRAFAPTWKKLARDLRKWRPVVRVAAVDCADEENVALCRDFGVTG-Y 79 (114)
T ss_pred eEECCHHhHHHHHhcC--CCeEEEEEECCCCHHHHHHhHHHHHHHHHHHhcCCceEEEEEeccchhhHHHHHhCCCCC-C
Confidence 4678999999988644 579999999999999999999999999998642 28999999964 678999999997 9
Q ss_pred CcEEEEcCCcc
Q psy12972 931 PQIALLTDGRT 941 (1578)
Q Consensus 931 PTl~lf~~G~~ 941 (1578)
||+++|++|..
T Consensus 80 Pt~~lf~~~~~ 90 (114)
T cd02992 80 PTLRYFPPFSK 90 (114)
T ss_pred CEEEEECCCCc
Confidence 99999988863
|
QSOX oxidizes thiol groups to disulfides like PDI, however, unlike PDI, this oxidation is accompanied by the reduction of oxygen to hydrogen peroxide. QSOX is localized in high concentrations in cells with heavy secretory load and prefers peptides and proteins as substrates, not monothiols like glutathione. Inside the cell, QSOX is found in the endoplasmic reticulum and Golgi. The flow of reducing equivalents in a QSOX-catalyzed reaction goes from the dithiol substrate - dithiol of the QSOX TRX domain - dithiols of the QSOX ERV1p domain - FAD - oxygen. |
| >cd02984 TRX_PICOT TRX domain, PICOT (for PKC-interacting cousin of TRX) subfamily; PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.8e-11 Score=119.78 Aligned_cols=95 Identities=15% Similarity=0.349 Sum_probs=79.8
Q ss_pred cccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCC
Q psy12972 860 HWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDG 939 (1578)
Q Consensus 860 ~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G 939 (1578)
.++|++.+.... +++++|.||++||++|+.+.|.++++++.+.. .+.++++|++++++++++|+|.+ +||+++|++|
T Consensus 2 ~~~~~~~~~~~~-~~~v~v~f~~~~C~~C~~~~~~l~~l~~~~~~-~i~~~~vd~~~~~~~~~~~~i~~-~Pt~~~~~~g 78 (97)
T cd02984 2 EEEFEELLKSDA-SKLLVLHFWAPWAEPCKQMNQVFEELAKEAFP-SVLFLSIEAEELPEISEKFEITA-VPTFVFFRNG 78 (97)
T ss_pred HHHHHHHHhhCC-CCEEEEEEECCCCHHHHHHhHHHHHHHHHhCC-ceEEEEEccccCHHHHHhcCCcc-ccEEEEEECC
Confidence 456666554332 68999999999999999999999999999743 49999999999999999999998 9999999999
Q ss_pred ccccccCCCCCHHHHHHHH
Q psy12972 940 RTSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 940 ~~~~y~~G~~s~~~L~~fi 958 (1578)
+......| .+.++|.+.|
T Consensus 79 ~~~~~~~g-~~~~~l~~~~ 96 (97)
T cd02984 79 TIVDRVSG-ADPKELAKKV 96 (97)
T ss_pred EEEEEEeC-CCHHHHHHhh
Confidence 88776656 5667777654
|
PICOT contains an N-terminal TRX-like domain, which does not contain the catalytic CXXC motif, followed by one to three glutaredoxin domains. The TRX-like domain is required for interaction with PKC theta. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. |
| >KOG0907|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.6e-11 Score=119.44 Aligned_cols=85 Identities=20% Similarity=0.389 Sum_probs=74.9
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCH
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSV 951 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~ 951 (1578)
.+++++|.|||+|||+|+.+.|.+.++|.++.+ +.|.+||+++..++|++++|+. .||+++|++|+......|. +.
T Consensus 20 ~~kliVvdF~a~wCgPCk~i~P~~~~La~~y~~--v~Flkvdvde~~~~~~~~~V~~-~PTf~f~k~g~~~~~~vGa-~~ 95 (106)
T KOG0907|consen 20 GDKLVVVDFYATWCGPCKAIAPKFEKLAEKYPD--VVFLKVDVDELEEVAKEFNVKA-MPTFVFYKGGEEVDEVVGA-NK 95 (106)
T ss_pred CCCeEEEEEECCCCcchhhhhhHHHHHHHHCCC--CEEEEEecccCHhHHHhcCceE-eeEEEEEECCEEEEEEecC-CH
Confidence 368999999999999999999999999999986 8999999999999999999998 9999999999987766663 44
Q ss_pred HHHHHHHHh
Q psy12972 952 QKMVEFFRL 960 (1578)
Q Consensus 952 ~~L~~fi~~ 960 (1578)
+.+.+.+.+
T Consensus 96 ~~l~~~i~~ 104 (106)
T KOG0907|consen 96 AELEKKIAK 104 (106)
T ss_pred HHHHHHHHh
Confidence 577666643
|
|
| >PLN00410 U5 snRNP protein, DIM1 family; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.8e-11 Score=125.71 Aligned_cols=100 Identities=9% Similarity=0.231 Sum_probs=80.9
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE-EEc
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA-LLT 937 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~-lf~ 937 (1578)
+..+|++.+... .+++++|.|||+||++|+.+.|.++++|+++.+. +.|++||++++++++++|+|.+ .||++ +|+
T Consensus 10 s~~e~d~~I~~~-~~~lVVvdF~A~WCgpCk~m~p~l~~la~~~~~~-~~~~kVDVDe~~dla~~y~I~~-~~t~~~ffk 86 (142)
T PLN00410 10 SGWAVDQAILAE-EERLVVIRFGHDWDETCMQMDEVLASVAETIKNF-AVIYLVDITEVPDFNTMYELYD-PCTVMFFFR 86 (142)
T ss_pred CHHHHHHHHHhc-CCCEEEEEEECCCChhHHHHHHHHHHHHHHcCCc-eEEEEEECCCCHHHHHHcCccC-CCcEEEEEE
Confidence 456677766533 5789999999999999999999999999999876 8899999999999999999996 77766 889
Q ss_pred CCc-cccccCC--------CCCHHHHHHHHHhh
Q psy12972 938 DGR-TSFFKEP--------SFSVQKMVEFFRLK 961 (1578)
Q Consensus 938 ~G~-~~~y~~G--------~~s~~~L~~fi~~~ 961 (1578)
+|+ .+.+..| ..+.++|++-+...
T Consensus 87 ~g~~~vd~~tG~~~k~~~~~~~k~~l~~~i~~~ 119 (142)
T PLN00410 87 NKHIMIDLGTGNNNKINWALKDKQEFIDIVETV 119 (142)
T ss_pred CCeEEEEEecccccccccccCCHHHHHHHHHHH
Confidence 998 5555556 45556666555433
|
|
| >cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.3e-11 Score=120.95 Aligned_cols=87 Identities=17% Similarity=0.324 Sum_probs=76.7
Q ss_pred CCCCcEEEEEEcCCCcccccccHHH---HHHHHHhCCCceEEEEEECcc----chhhHhHcCccccCCcEEEEc--CCcc
Q psy12972 871 SYTTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVHN----EQGLARRLGVGSQLPQIALLT--DGRT 941 (1578)
Q Consensus 871 s~~~~~LV~FyapwCg~Ck~l~p~~---~~lA~~l~~~~v~~a~VDc~~----~~~L~~k~gV~~~~PTl~lf~--~G~~ 941 (1578)
+.+++++|.||++||++|+.+.|.+ .++++.+.+ ++.++.||+++ ..+++++|+|.+ +||+++|. +|+.
T Consensus 9 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~~~i~~-~Pti~~~~~~~g~~ 86 (104)
T cd02953 9 AQGKPVFVDFTADWCVTCKVNEKVVFSDPEVQAALKK-DVVLLRADWTKNDPEITALLKRFGVFG-PPTYLFYGPGGEPE 86 (104)
T ss_pred HcCCeEEEEEEcchhHHHHHHHHHhcCCHHHHHHHhC-CeEEEEEecCCCCHHHHHHHHHcCCCC-CCEEEEECCCCCCC
Confidence 4578999999999999999999988 688888876 59999999987 578999999998 99999998 6887
Q ss_pred ccccCCCCCHHHHHHHHH
Q psy12972 942 SFFKEPSFSVQKMVEFFR 959 (1578)
Q Consensus 942 ~~y~~G~~s~~~L~~fi~ 959 (1578)
.....|..+.++|.++++
T Consensus 87 ~~~~~G~~~~~~l~~~l~ 104 (104)
T cd02953 87 PLRLPGFLTADEFLEALE 104 (104)
T ss_pred CcccccccCHHHHHHHhC
Confidence 777789999999988863
|
It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes. |
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.7e-10 Score=128.56 Aligned_cols=152 Identities=20% Similarity=0.137 Sum_probs=105.8
Q ss_pred ccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhh-CCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFL-YPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~-~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+|.+|--|-||+|...+|+.|||||++.........+ ....--.++ ....+...++..|. +.|.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~-----~Yi~gd~Rf~~~~~~rr~lv~~W~---------~kEf~ 120 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIR-----RYIQGDPRFRNSRSNRRKLVFAWA---------RKEFR 120 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHH-----HHHhcChhhhcCCCCHHHHHHHHH---------HHHHH
Confidence 8999999999999999999999999998765432211 111000011 01236666777776 78999
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCC---HHHHHHHHHHHHHHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFS---LADVDRKLFTAFAEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~---~~~v~~~l~~~~l~~i~~~G~vH~D 565 (1578)
|+.|+.+. +|.||+|+ ..-++|||||||... -.-...+...++. ...+...+++-+-.|....|+||+|
T Consensus 121 NL~R~~eA-----GVrvP~Pi--~~~~nVLvMEfIg~~-g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgD 192 (268)
T COG1718 121 NLKRAYEA-----GVRVPEPI--AFRNNVLVMEFIGDD-GLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGD 192 (268)
T ss_pred HHHHHHHc-----CCCCCCce--eecCCeEEEEeccCC-CCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCccccc
Confidence 99999864 59999999 566899999999322 2111223333333 3445555666556666679999999
Q ss_pred CCCCCCCCC--eeEEecCCc
Q psy12972 566 PHSGNDVNT--WLYPVDLGD 583 (1578)
Q Consensus 566 pHPGNilv~--~v~liDfG~ 583 (1578)
+..-|||+. .+++||+|-
T Consensus 193 LSEyNiL~~~~~p~iID~~Q 212 (268)
T COG1718 193 LSEYNILVHDGEPYIIDVSQ 212 (268)
T ss_pred chhhheEEECCeEEEEECcc
Confidence 999999965 689999983
|
|
| >KOG0661|consensus | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.3e-11 Score=143.41 Aligned_cols=139 Identities=19% Similarity=0.274 Sum_probs=98.5
Q ss_pred ccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
-||.|++|.||+|+- .+|..||||-.+ ..+.. + +|+-=.+|.+
T Consensus 17 klGDGTfGsV~la~~~~~~~~VAIK~MK---------------------~Kf~s---~------------ee~~nLREvk 60 (538)
T KOG0661|consen 17 KLGDGTFGSVYLAKSKETGELVAIKKMK---------------------KKFYS---W------------EECMNLREVK 60 (538)
T ss_pred HhcCCcceeEEEeeecCCCceeeHHHHH---------------------hhhcc---H------------HHHHHHHHHH
Confidence 479999999999995 489999999321 11110 1 1222245555
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++. .|...|.+=+|+.+--..-.+||||++ ..|..+..-++.-++...+-..+.+++ +..||++||||||+
T Consensus 61 sL~kln---~hpniikL~Evi~d~~~~L~fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDl 136 (538)
T KOG0661|consen 61 SLRKLN---PHPNIIKLKEVIRDNDRILYFVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDL 136 (538)
T ss_pred HHHhcC---CCCcchhhHHHhhccCceEeeeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccC
Confidence 555543 233345556666655445579999994 577777655556677788888888888 89999999999999
Q ss_pred CCCCCCCC---eeEEecCCchhhhh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKFRLV 588 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~~l~ 588 (1578)
||.|||+. -+++-|||.++.+.
T Consensus 137 KPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 137 KPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred ChhheEecccceeEecccccccccc
Confidence 99999987 38999999886653
|
|
| >cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.3e-11 Score=121.87 Aligned_cols=85 Identities=18% Similarity=0.241 Sum_probs=74.0
Q ss_pred eecc-ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 857 STTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 857 ~Lt~-~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
.++. ++|.+.+ +.+++++|.||+|||++|+.+.|.++++++.+.+ +.|++||++++++++++|+|.+ .||+++
T Consensus 8 ~i~~~~~~~~~i---~~~~~vvV~f~a~~c~~C~~~~p~l~~la~~~~~--i~f~~Vd~~~~~~l~~~~~v~~-vPt~l~ 81 (113)
T cd02989 8 EVSDEKEFFEIV---KSSERVVCHFYHPEFFRCKIMDKHLEILAKKHLE--TKFIKVNAEKAPFLVEKLNIKV-LPTVIL 81 (113)
T ss_pred EeCCHHHHHHHH---hCCCcEEEEEECCCCccHHHHHHHHHHHHHHcCC--CEEEEEEcccCHHHHHHCCCcc-CCEEEE
Confidence 4555 7888877 4468999999999999999999999999998864 8999999999999999999997 999999
Q ss_pred EcCCccccccCC
Q psy12972 936 LTDGRTSFFKEP 947 (1578)
Q Consensus 936 f~~G~~~~y~~G 947 (1578)
|++|+.+....|
T Consensus 82 fk~G~~v~~~~g 93 (113)
T cd02989 82 FKNGKTVDRIVG 93 (113)
T ss_pred EECCEEEEEEEC
Confidence 999986644433
|
The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit. |
| >PF13848 Thioredoxin_6: Thioredoxin-like domain; PDB: 3EC3_B 3BOA_A 2B5E_A 1BJX_A 2K18_A 3UEM_A 3BJ5_A 2BJX_A 2R2J_A 2L4C_A | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.1e-10 Score=121.89 Aligned_cols=182 Identities=18% Similarity=0.307 Sum_probs=134.7
Q ss_pred eccCCchHHHHHHHHh-hcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhh
Q psy12972 993 FQRSLPVRLRYLINAF-KHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITD 1071 (1578)
Q Consensus 993 F~~~~~~~~~~~~~a~-~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~ 1071 (1578)
|.+........+..++ .+++.+.|+.+ .+.++++++++.. |++++|+...+.+..+-.. .++...|..||.
T Consensus 1 F~~~~~~~~~~f~~~A~~~~~~~~F~~~-----~~~~~~~~~~~~~--p~i~~~k~~~~~~~~y~~~-~~~~~~l~~fI~ 72 (184)
T PF13848_consen 1 FPDKDSELFEIFEEAAEKLKGDYQFGVT-----FNEELAKKYGIKE--PTIVVYKKFDEKPVVYDGD-KFTPEELKKFIK 72 (184)
T ss_dssp ESTTTSHHHHHHHHHHHHHTTTSEEEEE-----E-HHHHHHCTCSS--SEEEEEECTTTSEEEESSS-TTSHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHhCcCCcEEEEE-----cHHHHHHHhCCCC--CcEEEeccCCCCceecccc-cCCHHHHHHHHH
Confidence 3445556666666555 67778999999 6888999999976 8999998754544443222 367889999999
Q ss_pred cCCCCCCcccCchhhhhhcCCCCceEEEEEec-CCcchHHHHHHHHHHHhhccCCCCcEEEEEEecCcchHHHHhccCCC
Q psy12972 1072 NNPYLTLPRISSQSMLDAVCPVKKLCVVLFSE-DSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPE 1150 (1578)
Q Consensus 1072 ~nk~p~vpeLts~~~~~~~c~~~~lcVll~~~-~~~~~~~~~~~lr~vA~~~~~~~~~v~F~~vd~~~q~~~~~~f~~~~ 1150 (1578)
.+++|.++++|..++....-...+.+++++.. +....+.....++++|++ ++++ +.|+|+|++..+++++.|....
T Consensus 73 ~~~~P~v~~~t~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~--~~~~-~~f~~~d~~~~~~~~~~~~i~~ 149 (184)
T PF13848_consen 73 KNSFPLVPELTPENFEKLFSSPKPPVLILFDNKDNESTEAFKKELQDIAKK--FKGK-INFVYVDADDFPRLLKYFGIDE 149 (184)
T ss_dssp HHSSTSCEEESTTHHHHHHSTSSEEEEEEEETTTHHHHHHHHHHHHHHHHC--TTTT-SEEEEEETTTTHHHHHHTTTTT
T ss_pred HhccccccccchhhHHHHhcCCCceEEEEEEcCCchhHHHHHHHHHHHHHh--cCCe-EEEEEeehHHhHHHHHHcCCCC
Confidence 99999999999988776664222446666654 445667888899999999 8876 8999999998899999883332
Q ss_pred CCCccccceeEEEEEcCCcceEeeccCCcccccccccccHHHHHHHhhh
Q psy12972 1151 DSSEISLHIAAMWRMDYKKIKYGWLLGDAVDDWKDYNTTKDRLDAGLRS 1199 (1578)
Q Consensus 1151 ~~~~~~~~lp~l~~~n~~~~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ 1199 (1578)
.++|.+++.+..+.+|.++..+ ..|.+.|..||++
T Consensus 150 ------~~~P~~vi~~~~~~~~~~~~~~--------~~~~~~i~~Fl~d 184 (184)
T PF13848_consen 150 ------DDLPALVIFDSNKGKYYYLPEG--------EITPESIEKFLND 184 (184)
T ss_dssp ------SSSSEEEEEETTTSEEEE--SS--------CGCHHHHHHHHHH
T ss_pred ------ccCCEEEEEECCCCcEEcCCCC--------CCCHHHHHHHhcC
Confidence 5889999899777555544432 4688899999873
|
... |
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-10 Score=129.15 Aligned_cols=133 Identities=21% Similarity=0.219 Sum_probs=93.2
Q ss_pred cccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNA 490 (1578)
Q Consensus 411 lasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n~ 490 (1578)
||.|++|.||+|. .+|++|+||+..+.....-..| + ......+.+|.+++
T Consensus 2 ig~G~~~~vy~~~-~~~~~~viK~~~~~~~~~~~~~---------------------~--------~~~~~~~~~E~~~l 51 (199)
T TIGR03724 2 IAKGAEAIIYLGD-FLGLKAVIKERVPKSYRHPELD---------------------E--------RIRRERTRNEARLL 51 (199)
T ss_pred CCCCceEEEEEee-cCCccEEEEEecCCcCcCchHH---------------------H--------HHHHHHHHHHHHHH
Confidence 7899999999998 5789999998665321110000 0 01112356788888
Q ss_pred HHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCCCC
Q psy12972 491 ERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHSGN 570 (1578)
Q Consensus 491 ~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHPGN 570 (1578)
.+++. ..+.+|.++.......+|||||++|.++.+... ..+ ..++..+... +..+|..|++|+|+||+|
T Consensus 52 ~~l~~-----~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~--~~~---~~~~~~i~~~-l~~lH~~gi~H~Dl~~~N 120 (199)
T TIGR03724 52 SRARK-----AGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIE--EGN---DELLREIGRL-VGKLHKAGIVHGDLTTSN 120 (199)
T ss_pred HHHHH-----CCCCCCEEEEEECCCCEEEEEEECCccHHHHHh--hcH---HHHHHHHHHH-HHHHHHCCeecCCCCcce
Confidence 88764 347788888766677799999999999987632 111 1455554443 668999999999999999
Q ss_pred CCC--CeeEEecCCch
Q psy12972 571 DVN--TWLYPVDLGDK 584 (1578)
Q Consensus 571 ilv--~~v~liDfG~~ 584 (1578)
||+ +.++++|||..
T Consensus 121 il~~~~~~~liDfg~a 136 (199)
T TIGR03724 121 IIVRDDKLYLIDFGLG 136 (199)
T ss_pred EEEECCcEEEEECCCC
Confidence 996 35777887754
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >smart00271 DnaJ DnaJ molecular chaperone homology domain | Back alignment and domain information |
|---|
Probab=99.15 E-value=3e-11 Score=107.76 Aligned_cols=57 Identities=56% Similarity=0.948 Sum_probs=53.7
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC--ChhHHHHHHHHHHHHHHcCCHH
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN--DPTAQEKFLQLTEAYNILSDAE 693 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~--~~~a~~~f~~i~~Ay~~L~d~~ 693 (1578)
.|+|++|||+++++.++||++|+++++++|||+++ .+.+.+.|++|++||++|+||.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence 48999999999999999999999999999999998 5788999999999999999974
|
|
| >cd06257 DnaJ DnaJ domain or J-domain | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.6e-11 Score=104.52 Aligned_cols=54 Identities=56% Similarity=0.976 Sum_probs=51.6
Q ss_pred CCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC-hhHHHHHHHHHHHHHHcCC
Q psy12972 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND-PTAQEKFLQLTEAYNILSD 691 (1578)
Q Consensus 638 d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~~L~d 691 (1578)
|||++|||+++++.++||++|+++++++|||+++. +.+.+.|++|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 68999999999999999999999999999999986 7789999999999999986
|
DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. |
| >KOG1731|consensus | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.3e-11 Score=144.89 Aligned_cols=192 Identities=18% Similarity=0.154 Sum_probs=119.3
Q ss_pred ccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC----Ccceeeeeecc---cCccccccCCc
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL----GVGFFTVHYDL---FGTTDGFSGQD 819 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~----~vg~v~~~~~~---~~~~~~i~g~~ 819 (1578)
.+.++.-+|...+.+ +.+.+||+||++|||||++++|+|+++|+.+.+. .+.+++|.... +|+..++.++
T Consensus 41 ii~Ld~~tf~~~v~~--~~~~~lVEFy~swCGhCr~FAPtfk~~A~dl~~W~~vv~vaaVdCA~~~N~~lCRef~V~~~- 117 (606)
T KOG1731|consen 41 IIELDVDTFNAAVFG--SRKAKLVEFYNSWCGHCRAFAPTFKKFAKDLEKWRPVVRVAAVDCADEENVKLCREFSVSGY- 117 (606)
T ss_pred eEEeehhhhHHHhcc--cchhHHHHHHHhhhhhhhhcchHHHHHHHHHhcccceeEEEEeeccchhhhhhHhhcCCCCC-
Confidence 345666689999976 4488999999999999999999999999999987 35677775543 7887777766
Q ss_pred cccccccccccCccccccccccccCccCcccceeEE---------------------------Eeeccccccceeccc--
Q psy12972 820 SASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHK---------------------------LSTTHWNFEKNYIPK-- 870 (1578)
Q Consensus 820 ~~~~~~~~i~~~Ptiklf~~~~~~~~~~~~i~~~~v---------------------------i~Lt~~nF~~~vl~~-- 870 (1578)
|++++|+.+......++++..-.. .-+.+.+-...+-+.
T Consensus 118 ------------Ptlryf~~~~~~~~~G~~~~~~~~~~ei~~~l~~~la~~~~~~~~~~WP~f~pl~~~~~~~~l~~~~~ 185 (606)
T KOG1731|consen 118 ------------PTLRYFPPDSQNKTDGSDVSGPVIPSEIRDQLIRTLAEEDAQNRYPSWPNFDPLKDTTTLEELDEGIS 185 (606)
T ss_pred ------------ceeeecCCccccCcCCCcccCCcchhhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcchHHHHhcccc
Confidence 888888865432222222211000 011111111111111
Q ss_pred CCCCcEEEEE-EcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCC
Q psy12972 871 SYTTPHLILF-YSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSF 949 (1578)
Q Consensus 871 s~~~~~LV~F-yapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~ 949 (1578)
+....+.|.| -.+. .=.|+.+-..+...++.+..+-+++.-.+.+ ++++. +|+..+|++|+.........
T Consensus 186 ~~~~yvAiv~e~~~s-------~lg~~~~l~~l~~~~v~vr~~~d~q~~~~~~-l~~~~-~~~~llfrnG~~q~l~~~~~ 256 (606)
T KOG1731|consen 186 TTANYVAIVFETEPS-------DLGWANLLNDLPSKQVGVRARLDTQNFPLFG-LKPDN-FPLALLFRNGEQQPLWPSSS 256 (606)
T ss_pred cccceeEEEEecCCc-------ccHHHHHHhhccCCCcceEEEecchhccccc-cCCCC-chhhhhhcCCcccccccccc
Confidence 1111233333 2332 2257777777765557777777777777777 89986 99999999998664444444
Q ss_pred CHHHHHHHHHhhC
Q psy12972 950 SVQKMVEFFRLKL 962 (1578)
Q Consensus 950 s~~~L~~fi~~~l 962 (1578)
+.+..++.|.+.+
T Consensus 257 s~~~y~~~I~~~l 269 (606)
T KOG1731|consen 257 SRSAYVKKIDDLL 269 (606)
T ss_pred cHHHHHHHHHHHh
Confidence 4444444444443
|
|
| >cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.1e-10 Score=114.67 Aligned_cols=86 Identities=22% Similarity=0.368 Sum_probs=79.1
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCH
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSV 951 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~ 951 (1578)
.+++++|.||++||+.|+.+.|.++++++.+.+. +.++.+|++++++++++++|.+ +||+++|++|+......|..+.
T Consensus 12 ~~~~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~-v~~~~id~d~~~~l~~~~~v~~-vPt~~i~~~g~~v~~~~g~~~~ 89 (97)
T cd02949 12 SDRLILVLYTSPTCGPCRTLKPILNKVIDEFDGA-VHFVEIDIDEDQEIAEAAGIMG-TPTVQFFKDKELVKEISGVKMK 89 (97)
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHhCCc-eEEEEEECCCCHHHHHHCCCee-ccEEEEEECCeEEEEEeCCccH
Confidence 4789999999999999999999999999999764 9999999999999999999997 9999999999988777798999
Q ss_pred HHHHHHHH
Q psy12972 952 QKMVEFFR 959 (1578)
Q Consensus 952 ~~L~~fi~ 959 (1578)
++|.+|++
T Consensus 90 ~~~~~~l~ 97 (97)
T cd02949 90 SEYREFIE 97 (97)
T ss_pred HHHHHhhC
Confidence 99988873
|
The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress. |
| >KOG4236|consensus | Back alignment and domain information |
|---|
Probab=99.13 E-value=9.1e-11 Score=138.23 Aligned_cols=147 Identities=16% Similarity=0.180 Sum_probs=103.8
Q ss_pred CChhhhccccCCcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHH
Q psy12972 397 CTHSQLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKV 475 (1578)
Q Consensus 397 ~~~~~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 475 (1578)
.++..+|+-|-++.+|||-||.||-|.. ++|++|||||.-. .++ |
T Consensus 558 vd~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdK--------------------lrF-p------------- 603 (888)
T KOG4236|consen 558 VDISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDK--------------------LRF-P------------- 603 (888)
T ss_pred hhHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeec--------------------ccC-C-------------
Confidence 3578899999999999999999999996 4999999998731 011 1
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHH-HHHHHH--
Q psy12972 476 PLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDR-KLFTAF-- 552 (1578)
Q Consensus 476 ~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~-~l~~~~-- 552 (1578)
-.+|-.+|+|.+-++.+. +|+|.--....|-..+-+.|||-+.|--|.-+..-+...++ +.+-. .+.+++
T Consensus 604 -~kqesqlR~EVaILq~l~-----HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~-er~TkFlvtQIL~A 676 (888)
T KOG4236|consen 604 -TKQESQLRNEVAILQNLH-----HPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLP-ERITKFLVTQILVA 676 (888)
T ss_pred -CchHHHHHHHHHHHHhcC-----CCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccch-HHHHHHHHHHHHHH
Confidence 123444577777776653 55555555554444444589999999877665544434443 43333 233333
Q ss_pred HHHHHHcCccccCCCCCCCCCC------eeEEecCCch
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT------WLYPVDLGDK 584 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~------~v~liDfG~~ 584 (1578)
++.+|..|++|||+||.|||.. +++++|||-+
T Consensus 677 Lr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfA 714 (888)
T KOG4236|consen 677 LRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFA 714 (888)
T ss_pred HHHhhhcceeeccCCchheeeccCCCCCceeeccccce
Confidence 8889999999999999999954 6888888865
|
|
| >cd02950 TxlA TRX-like protein A (TxlA) family; TxlA was originally isolated from the cyanobacterium Synechococcus | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.1e-10 Score=122.95 Aligned_cols=97 Identities=24% Similarity=0.364 Sum_probs=81.4
Q ss_pred ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccc--hhhHhHcCccccCCcEEEE-c
Q psy12972 861 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE--QGLARRLGVGSQLPQIALL-T 937 (1578)
Q Consensus 861 ~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~--~~L~~k~gV~~~~PTl~lf-~ 937 (1578)
.+|++.+ ..+++++|.|||+||++|+.+.|.+.++++.+.+. +.|+.||++.+ ..++++|+|.+ +||+++| +
T Consensus 11 ~~~~~a~---~~gk~vvV~F~A~WC~~C~~~~p~l~~l~~~~~~~-~~~v~v~vd~~~~~~~~~~~~V~~-iPt~v~~~~ 85 (142)
T cd02950 11 TPPEVAL---SNGKPTLVEFYADWCTVCQEMAPDVAKLKQKYGDQ-VNFVMLNVDNPKWLPEIDRYRVDG-IPHFVFLDR 85 (142)
T ss_pred CCHHHHH---hCCCEEEEEEECCcCHHHHHhHHHHHHHHHHhccC-eeEEEEEcCCcccHHHHHHcCCCC-CCEEEEECC
Confidence 3455443 45789999999999999999999999999999765 77887777654 58999999998 9999999 5
Q ss_pred CCccccccCCCCCHHHHHHHHHhhC
Q psy12972 938 DGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 938 ~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|+......|..+.+.|.+++.+.+
T Consensus 86 ~G~~v~~~~G~~~~~~l~~~l~~l~ 110 (142)
T cd02950 86 EGNEEGQSIGLQPKQVLAQNLDALV 110 (142)
T ss_pred CCCEEEEEeCCCCHHHHHHHHHHHH
Confidence 8988877779888899999998766
|
It is found only in oxygenic photosynthetic organisms. TRX is a small enzyme that participate in redox reactions, via the reversible oxidation of an active site dithiol present in a CXXC motif. Disruption of the txlA gene suggests that the protein is involved in the redox regulation of the structure and function of photosynthetic apparatus. The plant homolog (designated as HCF164) is localized in the chloroplast and is involved in the assembly of the cytochrome b6f complex, which takes a central position in photosynthetic electron transport. |
| >KOG0912|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.1e-10 Score=129.98 Aligned_cols=212 Identities=16% Similarity=0.146 Sum_probs=125.1
Q ss_pred cccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCc--ceeeeeecccCccccccCCccccccccccccC
Q psy12972 754 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGV--GFFTVHYDLFGTTDGFSGQDSASRNFHNHMYN 831 (1578)
Q Consensus 754 nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~v--g~v~~~~~~~~~~~~i~g~~~~~~~~~~i~~~ 831 (1578)
|++..+ .+...+||.|||+||..++.|+|+|+++|..++..-- .++ .|++||-+.-++..+ +.+..|
T Consensus 5 N~~~il---~s~elvfv~FyAdWCrFSq~L~piF~EAa~~~~~e~P~~kvv------wg~VDcd~e~~ia~k--y~I~Ky 73 (375)
T KOG0912|consen 5 NIDSIL---DSNELVFVNFYADWCRFSQMLKPIFEEAAAKFKQEFPEGKVV------WGKVDCDKEDDIADK--YHINKY 73 (375)
T ss_pred cHHHhh---ccceEEeeeeehhhchHHHHHhHHHHHHHHHHHHhCCCcceE------EEEcccchhhHHhhh--hccccC
Confidence 444444 3578899999999999999999999999999986521 122 233444444333333 445566
Q ss_pred ccccccccccccCccCcccce------eEEEeec--cc------cccceecccCCCCcEEEEEEcCCCcccccccHHHHH
Q psy12972 832 PFDDVFSEGFNFPFEEHDISL------FHKLSTT--HW------NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKK 897 (1578)
Q Consensus 832 Ptiklf~~~~~~~~~~~~i~~------~~vi~Lt--~~------nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~ 897 (1578)
||+++|..|+-..+++++... +....++ -+ ++.+... .+++.++-.|-...... ...+.+
T Consensus 74 PTlKvfrnG~~~~rEYRg~RsVeaL~efi~kq~s~~i~Ef~sl~~l~n~~~--p~K~~vIgyF~~kdspe----y~~~~k 147 (375)
T KOG0912|consen 74 PTLKVFRNGEMMKREYRGQRSVEALIEFIEKQLSDPINEFESLDQLQNLDI--PSKRTVIGYFPSKDSPE----YDNLRK 147 (375)
T ss_pred ceeeeeeccchhhhhhccchhHHHHHHHHHHHhccHHHHHHhHHHHHhhhc--cccceEEEEeccCCCch----HHHHHH
Confidence 999999988765555543322 2221111 11 2222221 12344444443232221 235678
Q ss_pred HHHHhCCCc-eEEEEEECccchhhHhHcCccccCCc--EEEEcCCccc---cccCCCCCHHHHHHHHHhhCCCccccccc
Q psy12972 898 LMDELSPLG-VGFFTVHVHNEQGLARRLGVGSQLPQ--IALLTDGRTS---FFKEPSFSVQKMVEFFRLKLPYKLIVPLS 971 (1578)
Q Consensus 898 lA~~l~~~~-v~~a~VDc~~~~~L~~k~gV~~~~PT--l~lf~~G~~~---~y~~G~~s~~~L~~fi~~~lp~~vv~~it 971 (1578)
+|..+++.- +-++.-|. .+-.. .|. +++|..+... .|.+...+.+.+..||.+..-| +|..+|
T Consensus 148 va~~lr~dc~f~V~~gD~---------~~~~~-~~~~~~~~f~pd~~~~~~~f~G~~~nf~el~~Wi~dKcvp-LVREiT 216 (375)
T KOG0912|consen 148 VASLLRDDCVFLVGFGDL---------LKPHE-PPGKNILVFDPDHSEPNHEFLGSMTNFDELKQWIQDKCVP-LVREIT 216 (375)
T ss_pred HHHHHhhccEEEeecccc---------ccCCC-CCCCceEEeCCCcCCcCcccccccccHHHHHHHHHhcchh-hhhhhh
Confidence 888887652 11111111 11121 333 4555544433 2443456688999999887743 688999
Q ss_pred cccHHHHhhcccCCCcEEEEEeccCC
Q psy12972 972 ATNVDAFLDNWREDNKVHALLFQRSL 997 (1578)
Q Consensus 972 ~~~~~~fl~~~~~~~~~~VlfF~~~~ 997 (1578)
-+|.+++.+. ..|++++|.++.
T Consensus 217 FeN~EELtEE----GlPflILf~~kd 238 (375)
T KOG0912|consen 217 FENAEELTEE----GLPFLILFRKKD 238 (375)
T ss_pred hccHHHHhhc----CCceEEEEecCC
Confidence 9999998876 789999985544
|
|
| >cd02987 Phd_like_Phd Phosducin (Phd)-like family, Phd subfamily; Phd is a cytosolic regulator of G protein functions | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.2e-10 Score=126.78 Aligned_cols=87 Identities=14% Similarity=0.157 Sum_probs=75.7
Q ss_pred EEeecc-ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 855 KLSTTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~Lt~-~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+.+++. ++|.+.|...+.+.+++|.||+|||++|+.+.|.++++|..+.. +.|++||+++. .++.+|+|.+ .||+
T Consensus 64 v~ei~~~~~f~~~v~~~~~~~~VVV~Fya~wc~~Ck~m~~~l~~LA~~~~~--vkF~kVd~d~~-~l~~~f~v~~-vPTl 139 (175)
T cd02987 64 VYELDSGEQFLDAIDKEGKDTTVVVHIYEPGIPGCAALNSSLLCLAAEYPA--VKFCKIRASAT-GASDEFDTDA-LPAL 139 (175)
T ss_pred EEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCchHHHHHHHHHHHHHHCCC--eEEEEEeccch-hhHHhCCCCC-CCEE
Confidence 446777 89998886554556999999999999999999999999999853 89999999987 8999999997 9999
Q ss_pred EEEcCCcccccc
Q psy12972 934 ALLTDGRTSFFK 945 (1578)
Q Consensus 934 ~lf~~G~~~~y~ 945 (1578)
++|++|+.+...
T Consensus 140 llyk~G~~v~~~ 151 (175)
T cd02987 140 LVYKGGELIGNF 151 (175)
T ss_pred EEEECCEEEEEE
Confidence 999999866433
|
It specifically binds G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane. This impedes the formation of a functional G protein trimer (G protein alphabetagamma), thereby inhibiting G protein-mediated signal transduction. Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-terminal helical domain. |
| >KOG4250|consensus | Back alignment and domain information |
|---|
Probab=99.11 E-value=8.6e-11 Score=144.62 Aligned_cols=129 Identities=21% Similarity=0.269 Sum_probs=85.5
Q ss_pred ccccCCcccccccceEEEEEEe-cCCCEEEEEEecchh----hhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 403 FRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDL----RERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 403 F~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i----~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.+...+-+|.|++|+||+|+. .+|+.||||+-++-. ++....++.+|+.+ +
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKL-----------n------------ 69 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKL-----------N------------ 69 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHc-----------C------------
Confidence 4556668899999999999995 589999999877532 11111222222111 0
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEee-C-CCCceEEEEeccCCCcCCchhhH--hhcCCCHHHHHHHHHHHH-
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILW-D-KSSTRVLTTEFIDGVKISDKEGL--LEKGFSLADVDRKLFTAF- 552 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~-~-~~t~~VLVME~i~G~~l~d~~~l--~~~~~~~~~v~~~l~~~~- 552 (1578)
..|+-. .+.||..-. - -+...||||||+.|++|.....- ...|++..++...+.++.
T Consensus 70 ---------h~NIVk---------~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~ 131 (732)
T KOG4250|consen 70 ---------HPNIVK---------LFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVS 131 (732)
T ss_pred ---------chhhhh---------hcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHH
Confidence 111111 122333221 1 14457999999999999876331 246888888877776655
Q ss_pred -HHHHHHcCccccCCCCCCCC
Q psy12972 553 -AEQIFQTGFVHADPHSGNDV 572 (1578)
Q Consensus 553 -l~~i~~~G~vH~DpHPGNil 572 (1578)
+..++++|++|||+||||||
T Consensus 132 al~~LrEn~IvHRDlKP~NIv 152 (732)
T KOG4250|consen 132 ALRHLRENGIVHRDLKPGNIV 152 (732)
T ss_pred HHHHHHHcCceeccCCCCcEE
Confidence 78899999999999999999
|
|
| >cd02983 P5_C P5 family, C-terminal redox inactive TRX-like domain; P5 is a protein disulfide isomerase (PDI)-related protein with a domain structure of aa'b (where a and a' are redox active TRX domains and b is a redox inactive TRX-like domain) | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.1e-10 Score=116.53 Aligned_cols=114 Identities=19% Similarity=0.349 Sum_probs=97.7
Q ss_pred CCCcccCchhhhhhcCCCCceEEEEEecCC-----cchHHHHHHHHHHHhhccCCCCcEEEEEEecCcchHHHHhccCCC
Q psy12972 1076 LTLPRISSQSMLDAVCPVKKLCVVLFSEDS-----PEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPE 1150 (1578)
Q Consensus 1076 p~vpeLts~~~~~~~c~~~~lcVll~~~~~-----~~~~~~~~~lr~vA~~~~~~~~~v~F~~vd~~~q~~~~~~f~~~~ 1150 (1578)
|.+.+||+++.++..|..+++|||++.++. ++.+...+.|+++|++ |+++++.|+|+|++.|..+++.|..+.
T Consensus 2 ~~~~~l~~~~~~~~~C~~~~~C~i~~l~~~~d~~~e~~~~~~~~l~~vAk~--~kgk~i~Fv~vd~~~~~~~~~~fgl~~ 79 (130)
T cd02983 2 PEIIELTSEDVFEETCEEKQLCIIAFLPHILDCQASCRNKYLEILKSVAEK--FKKKPWGWLWTEAGAQLDLEEALNIGG 79 (130)
T ss_pred CceEEecCHHHHHhhccCCCeEEEEEcCccccCCHHHHHHHHHHHHHHHHH--hcCCcEEEEEEeCcccHHHHHHcCCCc
Confidence 578899999999999977799999998643 3457788999999999 999989999999999999999983222
Q ss_pred CCCccccceeEEEEEcCCcceEeeccCCcccccccccccHHHHHHHhhhhhcCCcc
Q psy12972 1151 DSSEISLHIAAMWRMDYKKIKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 1206 (1578)
Q Consensus 1151 ~~~~~~~~lp~l~~~n~~~~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~~ 1206 (1578)
.++|++++.|.++.+|..+.++ +|.++|.+|++.+++|...
T Consensus 80 ------~~~P~v~i~~~~~~KY~~~~~~---------~t~e~i~~Fv~~~l~Gkl~ 120 (130)
T cd02983 80 ------FGYPAMVAINFRKMKFATLKGS---------FSEDGINEFLRELSYGRGP 120 (130)
T ss_pred ------cCCCEEEEEecccCccccccCc---------cCHHHHHHHHHHHHcCCcc
Confidence 4789999999876799877664 7889999999999999986
|
Like PDI, P5 is located in the endoplasmic reticulum (ER) and displays both isomerase and chaperone activities, which are independent of each other. Compared to PDI, the isomerase and chaperone activities of P5 are lower. The first cysteine in the CXXC motif of both redox active domains in P5 is necessary for isomerase activity. The P5 gene was first isolated as an amplified gene from a hydroxyurea-resistant hamster cell line. The zebrafish P5 homolog has been implicated to play a critical role in establishing left/right asymmetries in the embryonic midline. The C-terminal domain is likely involved in substrate binding, similar to the b and b' domains of PDI. |
| >TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ | Back alignment and domain information |
|---|
Probab=99.11 E-value=8e-11 Score=145.81 Aligned_cols=69 Identities=39% Similarity=0.754 Sum_probs=65.8
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.|||++|||+++|+.++||+|||+|+++||||+++.+.+.++|++|++||++|+|+.+|+.||.+|..+
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG 70 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGHDG 70 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccc
Confidence 599999999999999999999999999999999988888899999999999999999999999988754
|
This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. |
| >PTZ00051 thioredoxin; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=9.1e-11 Score=115.08 Aligned_cols=89 Identities=19% Similarity=0.414 Sum_probs=75.7
Q ss_pred cccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCC
Q psy12972 860 HWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDG 939 (1578)
Q Consensus 860 ~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G 939 (1578)
.++|.+.+ +.+++++|.||++||++|+.+.|.++++++.+.+ +.++.||++++..++++|+|.+ +||+++|++|
T Consensus 8 ~~~~~~~~---~~~~~vli~f~~~~C~~C~~~~~~l~~l~~~~~~--~~~~~vd~~~~~~~~~~~~v~~-~Pt~~~~~~g 81 (98)
T PTZ00051 8 QAEFESTL---SQNELVIVDFYAEWCGPCKRIAPFYEECSKEYTK--MVFVKVDVDELSEVAEKENITS-MPTFKVFKNG 81 (98)
T ss_pred HHHHHHHH---hcCCeEEEEEECCCCHHHHHHhHHHHHHHHHcCC--cEEEEEECcchHHHHHHCCCce-eeEEEEEeCC
Confidence 34566644 3478999999999999999999999999998754 8999999999999999999998 9999999999
Q ss_pred ccccccCCCCCHHHHH
Q psy12972 940 RTSFFKEPSFSVQKMV 955 (1578)
Q Consensus 940 ~~~~y~~G~~s~~~L~ 955 (1578)
+......|. ..++|.
T Consensus 82 ~~~~~~~G~-~~~~~~ 96 (98)
T PTZ00051 82 SVVDTLLGA-NDEALK 96 (98)
T ss_pred eEEEEEeCC-CHHHhh
Confidence 988777674 555554
|
|
| >PHA03102 Small T antigen; Reviewed | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.3e-11 Score=123.95 Aligned_cols=67 Identities=30% Similarity=0.466 Sum_probs=61.4
Q ss_pred CCCcccccccccC--CHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCC
Q psy12972 637 LDPYETLGVPRTA--SLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDG 706 (1578)
Q Consensus 637 ~d~y~iLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~ 706 (1578)
...|++|||+++| |.++||+|||++++++||||+++ .++|++|++||++|+|+..|..||.+|....
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~---~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~ 73 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD---EEKMKELNTLYKKFRESVKSLRDLDGEEDSS 73 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch---hHHHHHHHHHHHHHhhHHHhccccccCCccc
Confidence 4578999999999 99999999999999999999754 5799999999999999999999999987653
|
|
| >KOG0581|consensus | Back alignment and domain information |
|---|
Probab=99.10 E-value=3e-10 Score=131.57 Aligned_cols=136 Identities=18% Similarity=0.209 Sum_probs=92.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
.-||+|+=|.|++++++ +|+-.|+|+.+-++.. ++++++.+||+..++.
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~------------------------------~~~~Qi~rEl~il~~~ 134 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDP------------------------------ALQKQILRELEILRSC 134 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCH------------------------------HHHHHHHHHHHHHhhC
Confidence 46999999999999986 7899999998544332 3344455555543332
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC---ceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS---TRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t---~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~ 561 (1578)
..+ +|-+.|.-+.. .-.|+|||+||.+|+++.. ....++...++....+++ +..+|. +++
T Consensus 135 -----------~sp--yIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k-~~g~i~E~~L~~ia~~VL~GL~YLh~~~~I 200 (364)
T KOG0581|consen 135 -----------QSP--YIVGFYGAFYSNGEEISICMEYMDGGSLDDILK-RVGRIPEPVLGKIARAVLRGLSYLHEERKI 200 (364)
T ss_pred -----------CCC--CeeeEeEEEEeCCceEEeehhhcCCCCHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhccCe
Confidence 122 22233332222 2459999999999998743 123455444444444444 778884 999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhhhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFRLV 588 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~l~ 588 (1578)
+|||+||.|||++ +|++.|||-.+.++
T Consensus 201 IHRDIKPsNlLvNskGeVKicDFGVS~~lv 230 (364)
T KOG0581|consen 201 IHRDIKPSNLLVNSKGEVKICDFGVSGILV 230 (364)
T ss_pred eeccCCHHHeeeccCCCEEeccccccHHhh
Confidence 9999999999975 69999999887664
|
|
| >KOG0605|consensus | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.6e-10 Score=135.65 Aligned_cols=132 Identities=17% Similarity=0.196 Sum_probs=83.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||-|++|+||.|+-+ +|.-.|+|+++.. +|.- +.+.
T Consensus 147 k~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS-------~M~~----------------------------------~~Qv 185 (550)
T KOG0605|consen 147 KVIGKGAFGEVRLARKKDTGEIYAMKILKKS-------EMLK----------------------------------KNQV 185 (550)
T ss_pred eeeccccceeEEEEEEccCCcEEeeecccHH-------HHHh----------------------------------hhhH
Confidence 79999999999999976 7999999998632 2111 1111
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCc--eEEEEeccCCCcCCchhhHhhcC-CCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSST--RVLTTEFIDGVKISDKEGLLEKG-FSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~--~VLVME~i~G~~l~d~~~l~~~~-~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
++...=|..+.....-.|-+.|-.+-.. -+|||||++|+.+..+. ...+ ++...+---+.+++ ++.||++|++
T Consensus 186 ~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL--~~~~~L~e~~arfYiaE~vlAI~~iH~~gyI 263 (550)
T KOG0605|consen 186 EHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLL--MRKDTLTEDWARFYIAETVLAIESIHQLGYI 263 (550)
T ss_pred HHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHH--HhcCcCchHHHHHHHHHHHHHHHHHHHcCcc
Confidence 1111112222211222344555444333 36999999999988763 3333 33333333455555 6789999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCc
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGD 583 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~ 583 (1578)
|||+||.|+|+. .+++.|||+
T Consensus 264 HRDIKPdNlLiD~~GHiKLSDFGL 287 (550)
T KOG0605|consen 264 HRDIKPDNLLIDAKGHIKLSDFGL 287 (550)
T ss_pred cccCChhheeecCCCCEeeccccc
Confidence 999999999954 355555553
|
|
| >cd02986 DLP Dim1 family, Dim1-like protein (DLP) subfamily; DLP is a novel protein which shares 38% sequence identity to Dim1 | Back alignment and domain information |
|---|
Probab=99.09 E-value=1e-10 Score=116.15 Aligned_cols=79 Identities=16% Similarity=0.278 Sum_probs=69.8
Q ss_pred ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCc
Q psy12972 861 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGR 940 (1578)
Q Consensus 861 ~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~ 940 (1578)
+.|++.+... .+++++|.|+|+||++|+.+.|.++++|.++++. +.|++||.++.+++++.|+|.. .||+++|++|+
T Consensus 3 ~~~d~~i~~~-~~klVVVdF~a~WC~pCk~mdp~l~ela~~~~~~-~~f~kVDVDev~dva~~y~I~a-mPtfvffkngk 79 (114)
T cd02986 3 KEVDQAIKST-AEKVLVLRFGRDEDAVCLQLDDILSKTSHDLSKM-ASIYLVDVDKVPVYTQYFDISY-IPSTIFFFNGQ 79 (114)
T ss_pred HHHHHHHHhc-CCCEEEEEEeCCCChhHHHHHHHHHHHHHHccCc-eEEEEEeccccHHHHHhcCcee-CcEEEEEECCc
Confidence 3455555433 5899999999999999999999999999999865 8999999999999999999997 99999999998
Q ss_pred cc
Q psy12972 941 TS 942 (1578)
Q Consensus 941 ~~ 942 (1578)
..
T Consensus 80 h~ 81 (114)
T cd02986 80 HM 81 (114)
T ss_pred EE
Confidence 55
|
Like Dim1, it is also implicated in pre-mRNA splicing and cell cycle progression. DLP is located in the nucleus and has been shown to interact with the U5 small nuclear ribonucleoprotein particle (snRNP)-specific 102kD protein (or Prp6). Dim1 protein, also known as U5 snRNP-specific 15kD protein is a component of U5 snRNP, which pre-assembles with U4/U6 snRNPs to form a [U4/U6:U5] tri-snRNP complex required for pre-mRNA splicing. Dim1 adopts a thioredoxin fold but does not contain the redox active CXXC motif. |
| >cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.7e-10 Score=108.75 Aligned_cols=91 Identities=26% Similarity=0.543 Sum_probs=78.6
Q ss_pred cccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCcc
Q psy12972 862 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRT 941 (1578)
Q Consensus 862 nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~ 941 (1578)
+|.+.+ ..+++++|.||++||++|..+.|.++++++. .+ ++.++.+|++.+.++++++++.+ +||+++|.+|+.
T Consensus 2 ~~~~~~---~~~~~~ll~~~~~~C~~C~~~~~~~~~~~~~-~~-~~~~~~i~~~~~~~~~~~~~v~~-~P~~~~~~~g~~ 75 (93)
T cd02947 2 EFEELI---KSAKPVVVDFWAPWCGPCKAIAPVLEELAEE-YP-KVKFVKVDVDENPELAEEYGVRS-IPTFLFFKNGKE 75 (93)
T ss_pred chHHHH---hcCCcEEEEEECCCChhHHHhhHHHHHHHHH-CC-CceEEEEECCCChhHHHhcCccc-ccEEEEEECCEE
Confidence 445444 2348999999999999999999999999988 33 49999999999999999999997 999999999987
Q ss_pred ccccCCCCCHHHHHHHH
Q psy12972 942 SFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 942 ~~y~~G~~s~~~L~~fi 958 (1578)
...+.|..+.+.|.+|+
T Consensus 76 ~~~~~g~~~~~~l~~~i 92 (93)
T cd02947 76 VDRVVGADPKEELEEFL 92 (93)
T ss_pred EEEEecCCCHHHHHHHh
Confidence 76677888888998887
|
Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functio |
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.4e-10 Score=121.09 Aligned_cols=124 Identities=18% Similarity=0.221 Sum_probs=90.3
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+|++.|..++||+++.. |+.|+||+..++.. ...++..|++
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~--------------------------------------~~~~~~~E~~ 44 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE--------------------------------------LLINRENEAE 44 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc--------------------------------------cccCHHHHHH
Confidence 78999999999999864 78999998765421 0135678888
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcC-----ccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTG-----FVH 563 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G-----~vH 563 (1578)
+++.+.+. ..+|+++....+..++||||++|.++.+... .+ ......+.++ +..+|..+ ++|
T Consensus 45 ~l~~l~~~------~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~~-----~~-~~~~~~l~~~-l~~LH~~~~~~~~~~H 111 (170)
T cd05151 45 NSKLAAEA------GIGPKLYYFDPETGVLITEFIEGSELLTEDF-----SD-PENLEKIAKL-LKKLHSSPLPDLVPCH 111 (170)
T ss_pred HHHHHHHh------CCCCceEEEeCCCCeEEEEecCCCccccccc-----cC-HHHHHHHHHH-HHHHhCCCCCCceeec
Confidence 88888753 2378888776667899999999999876411 11 2233444443 55678777 599
Q ss_pred cCCCCCCCCCC--eeEEecCCch
Q psy12972 564 ADPHSGNDVNT--WLYPVDLGDK 584 (1578)
Q Consensus 564 ~DpHPGNilv~--~v~liDfG~~ 584 (1578)
+|+||+|||+. ++++||||..
T Consensus 112 gD~~~~Nil~~~~~~~liDf~~a 134 (170)
T cd05151 112 NDLLPGNFLLDDGRLWLIDWEYA 134 (170)
T ss_pred CCCCcCcEEEECCeEEEEecccc
Confidence 99999999963 5778888754
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0615|consensus | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.4e-10 Score=130.83 Aligned_cols=140 Identities=20% Similarity=0.267 Sum_probs=92.0
Q ss_pred CcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 408 ENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
.+-+|+|.+|-|-.|.- ++|+.||||+....--. + . ++....+.|-++|
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~----~-------------~-------------s~~~~~~~~v~~E 226 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKST----G-------------C-------------SRAIAKTRDVQNE 226 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcc----c-------------c-------------cccccchhhhHHH
Confidence 36899999999999985 58999999998642110 0 0 0001123445777
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH---HHHHHHcCccc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF---AEQIFQTGFVH 563 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~---l~~i~~~G~vH 563 (1578)
+.-+.++. |...|.+-..+.+ ...-+||||||+|+.|-|.. .+++.-.++..+.++..+ +..+|..|+.|
T Consensus 227 ieILkkL~----HP~IV~~~d~f~~-~ds~YmVlE~v~GGeLfd~v--v~nk~l~ed~~K~~f~Qll~avkYLH~~GI~H 299 (475)
T KOG0615|consen 227 IEILKKLS----HPNIVRIKDFFEV-PDSSYMVLEYVEGGELFDKV--VANKYLREDLGKLLFKQLLTAVKYLHSQGIIH 299 (475)
T ss_pred HHHHHhcC----CCCEEEEeeeeec-CCceEEEEEEecCccHHHHH--HhccccccchhHHHHHHHHHHHHHHHHcCccc
Confidence 77777764 3333555555432 22338999999999998753 333333333333332222 67899999999
Q ss_pred cCCCCCCCCCC------eeEEecCCch
Q psy12972 564 ADPHSGNDVNT------WLYPVDLGDK 584 (1578)
Q Consensus 564 ~DpHPGNilv~------~v~liDfG~~ 584 (1578)
||+||.|||+. .+++.|||++
T Consensus 300 RDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 300 RDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred ccCCcceEEeccCCcceEEEecccchh
Confidence 99999999965 2777788864
|
|
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.05 E-value=9.1e-10 Score=125.88 Aligned_cols=136 Identities=18% Similarity=0.185 Sum_probs=95.6
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
++||.|++|.||+|...+++.||+|+.++..... .+.++.+|++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~------------------------------------~~~~~~~e~~ 44 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQE------------------------------------LKIKFLSEAR 44 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHH------------------------------------HHHHHHHHHH
Confidence 4689999999999998899999999876543211 1124566666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++ .+...+.+...+ ......+|||||++|.++.+........++...+...+.++. +..+|..|++|+|+
T Consensus 45 ~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl 119 (250)
T cd05085 45 ILKQY----DHPNIVKLIGVC-TQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDL 119 (250)
T ss_pred HHHhC----CCCCcCeEEEEE-ecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccc
Confidence 66654 222223333333 233467899999999999876433233456666666555554 67889999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|+||++. .++++|||...
T Consensus 120 ~p~nili~~~~~~~l~d~g~~~ 141 (250)
T cd05085 120 AARNCLVGENNVLKISDFGMSR 141 (250)
T ss_pred ChheEEEcCCCeEEECCCccce
Confidence 99999975 48999999763
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd03006 PDI_a_EFP1_N PDIa family, N-terminal EFP1 subfamily; EFP1 is a binding partner protein of thyroid oxidase (ThOX), also called Duox | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.2e-11 Score=120.75 Aligned_cols=82 Identities=11% Similarity=0.105 Sum_probs=60.9
Q ss_pred ccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeecc-cC-ccccccCCccccc
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYDL-FG-TTDGFSGQDSASR 823 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~~-~~-~~~~i~g~~~~~~ 823 (1578)
.+.++..||++.+.-.++++++||+||||||+||+.++|.|+++|+.+++. .++.++|..+. +| ....+.+
T Consensus 11 v~~l~~~~f~~~~~v~~~~~~vlV~FyA~WC~~Ck~l~p~~~~la~~~~~~v~~~~Vd~d~~~~l~~~~~~I~~------ 84 (113)
T cd03006 11 VLDFYKGQLDYAEELRTDAEVSLVMYYAPWDAQSQAARQEFEQVAQKLSDQVLFVAINCWWPQGKCRKQKHFFY------ 84 (113)
T ss_pred eEEechhhhHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCChHHHHHhcCCcc------
Confidence 457778899987544568899999999999999999999999999999864 34444543322 44 2344444
Q ss_pred cccccccCcccccccccc
Q psy12972 824 NFHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 824 ~~~~i~~~Ptiklf~~~~ 841 (1578)
+||+.+|..|-
T Consensus 85 -------~PTl~lf~~g~ 95 (113)
T cd03006 85 -------FPVIHLYYRSR 95 (113)
T ss_pred -------cCEEEEEECCc
Confidence 49999997653
|
ThOX proteins are responsible for the generation of hydrogen peroxide, a crucial substrate of thyroperoxidase, which functions to iodinate thyroglobulin and synthesize thyroid hormones. EFP1 was isolated through a yeast two-hybrid method using the EF-hand fragment of dog Duox1 as a bait. It could be one of the partners in the assembly of a multiprotein complex constituting the thyroid hydrogen peroxide generating system. EFP1 contains two TRX domains related to the redox active TRX domains of protein disulfide isomerase (PDI). This subfamily is composed of the N-terminal TRX domain of EFP1, which contains a CXXS sequence in place of the typical CXXC motif, similar to ERp44. The CXXS motif allows the formation of stable mixed disulfides, crucial for the ER-retention function of ERp44. |
| >KOG0722|consensus | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.1e-10 Score=126.59 Aligned_cols=70 Identities=40% Similarity=0.676 Sum_probs=65.3
Q ss_pred cccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCC
Q psy12972 634 AVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGT 703 (1578)
Q Consensus 634 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~ 703 (1578)
....|+|++|||+++++.+||.+|||+||+++|||+++++.+.+.|..|..||++|.|.+.|..||-.-.
T Consensus 30 CG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAtayeilkd~e~rt~ydyald 99 (329)
T KOG0722|consen 30 CGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIATAYEILKDNETRTQYDYALD 99 (329)
T ss_pred ccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhcccccccchhhHHhHHHHhc
Confidence 3457999999999999999999999999999999999999989999999999999999999999997443
|
|
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.1e-09 Score=121.21 Aligned_cols=95 Identities=26% Similarity=0.443 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHH-hhCCC--CCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcC
Q psy12972 484 LNEGRNAERCSK-DLAHL--PYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~-~~~~~--~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G 560 (1578)
.++..|+.+++. .+... +.+.+-+-.+.+++..+|+||||||.++.|...+. +.++..+.+ .+.++|.+|
T Consensus 83 ~~l~~~~~~i~~~g~~~~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~i~------e~~~~ki~~-~ikqlH~~G 155 (229)
T PF06176_consen 83 SRLINNTDKIRNEGFTEPADPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIEDID------EDLAEKIVE-AIKQLHKHG 155 (229)
T ss_pred HHHHHHHHHHHHcCccccccceeeeeeeeccceeEEEEEEEEecCeecccchhcC------HHHHHHHHH-HHHHHHHcC
Confidence 445556666654 23322 23444455667888999999999999999875432 235555554 579999999
Q ss_pred ccccCCCCCCCCCC--eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT--WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~--~v~liDfG~~~ 585 (1578)
++|+||||||++++ .+++||+++..
T Consensus 156 ~~HGD~hpgNFlv~~~~i~iID~~~k~ 182 (229)
T PF06176_consen 156 FYHGDPHPGNFLVSNNGIRIIDTQGKR 182 (229)
T ss_pred CccCCCCcCcEEEECCcEEEEECcccc
Confidence 99999999999965 59999998763
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >cd02982 PDI_b'_family Protein Disulfide Isomerase (PDIb') family, redox inactive TRX-like domain b'; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants | Back alignment and domain information |
|---|
Probab=99.04 E-value=5.3e-10 Score=110.61 Aligned_cols=87 Identities=21% Similarity=0.326 Sum_probs=78.8
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCcc--ccCCcEEEEcC--CccccccCCC
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVG--SQLPQIALLTD--GRTSFFKEPS 948 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~--~~~PTl~lf~~--G~~~~y~~G~ 948 (1578)
++++++.|+++||++|+.+.|.++++|+++++. +.|+.||+++++.+++.+||. + +|+++++++ |....+..|.
T Consensus 12 ~~~~~~~f~~~~~~~~~~~~~~~~~vA~~~~~~-v~f~~vd~~~~~~~~~~~~i~~~~-~P~~~~~~~~~~~k~~~~~~~ 89 (103)
T cd02982 12 GKPLLVLFYNKDDSESEELRERFKEVAKKFKGK-LLFVVVDADDFGRHLEYFGLKEED-LPVIAIINLSDGKKYLMPEEE 89 (103)
T ss_pred CCCEEEEEEcCChhhHHHHHHHHHHHHHHhCCe-EEEEEEchHhhHHHHHHcCCChhh-CCEEEEEecccccccCCCccc
Confidence 579999999999999999999999999999987 999999999999999999999 7 999999988 6666666566
Q ss_pred CCHHHHHHHHHhh
Q psy12972 949 FSVQKMVEFFRLK 961 (1578)
Q Consensus 949 ~s~~~L~~fi~~~ 961 (1578)
.+.++|.+|+.+.
T Consensus 90 ~~~~~l~~fi~~~ 102 (103)
T cd02982 90 LTAESLEEFVEDF 102 (103)
T ss_pred cCHHHHHHHHHhh
Confidence 6899999999764
|
Members of this family include PDI, calsequestrin and other PDI-related proteins like ERp72, ERp57 (or ERp60), ERp44, P5 and PDIR. PDI, ERp57, ERp72, P5 and PDIR are all oxidases, catalyzing the formation of disulfide bonds of newly synthesized polypeptides in the ER. They also exhibit reductase activity in acting as isomerases to correct any non-native disulfide bonds, as well as chaperone activity to prevent protein aggregation and facilitate the folding of newly synthesized proteins. These proteins contain multiple copies of a redox active TRX (a) domain containing a CXXC motif, and one or more redox inactive TRX-like (b) domains. The molecular structure of PDI is abb'a'. Also included in this family is the PDI-related protein ERp27, w |
| >KOG0667|consensus | Back alignment and domain information |
|---|
Probab=99.03 E-value=6.7e-10 Score=136.71 Aligned_cols=136 Identities=21% Similarity=0.146 Sum_probs=91.2
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.||||||-||.. ++|+.|||||.+-.-+-. .++ ..|.
T Consensus 192 e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~-----------------------------------~Q~---~~Ei 233 (586)
T KOG0667|consen 192 EVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFL-----------------------------------RQA---QIEI 233 (586)
T ss_pred EEecccccceeEEEEecCCCcEEEEEeeccChHHH-----------------------------------HHH---HHHH
Confidence 7899999999999995 589999999986432210 000 2344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhH-hhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGL-LEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l-~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+-++++++.- ......+-+.+..+ -..-.||.|.+ +..|.++..- .-.|++...+-..+.+++ |..+++.|+|
T Consensus 234 ~iL~~ln~~d-~~~~~n~Vrm~d~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~II 311 (586)
T KOG0667|consen 234 RILELLNKHD-PDDKYNIVRMLDYFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGII 311 (586)
T ss_pred HHHHHHhccC-CCCCeeEEEeeeccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 5555555311 11223333444333 35568999999 7788887432 224677665544444444 7788999999
Q ss_pred ccCCCCCCCCCC-----eeEEecCCch
Q psy12972 563 HADPHSGNDVNT-----WLYPVDLGDK 584 (1578)
Q Consensus 563 H~DpHPGNilv~-----~v~liDfG~~ 584 (1578)
||||||.|||+- .|++||||..
T Consensus 312 HcDLKPENILL~~~~r~~vKVIDFGSS 338 (586)
T KOG0667|consen 312 HCDLKPENILLKDPKRSRIKVIDFGSS 338 (586)
T ss_pred eccCChhheeeccCCcCceeEEecccc
Confidence 999999999943 5999999976
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=8e-10 Score=133.24 Aligned_cols=130 Identities=15% Similarity=0.065 Sum_probs=87.2
Q ss_pred cccccccceEEEEEEec--CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK--EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
+.||.|++|+||+|..+ +|+.||||+..+..... ..+ .....|.+|
T Consensus 24 ~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~-~~~-------------------------------~~~~~~~~E 71 (365)
T PRK09188 24 AVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWW-SKP-------------------------------LARHLAARE 71 (365)
T ss_pred cEEeecCcEEEEEEEEcCCCCeEEEEEEeccccccc-ccH-------------------------------HHHHHHHHH
Confidence 67999999999999865 68889999875331100 000 011236788
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCC
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADP 566 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~Dp 566 (1578)
++.+.++++ +.+ ||.++. ....+|||||++|.+|... ... ....+...+++ .+..+|..|++|||+
T Consensus 72 ~~iL~~L~h-----~~i-v~~l~~--~~~~~LVmE~~~G~~L~~~---~~~--~~~~~~~~i~~-aL~~lH~~gIiHrDL 137 (365)
T PRK09188 72 IRALKTVRG-----IGV-VPQLLA--TGKDGLVRGWTEGVPLHLA---RPH--GDPAWFRSAHR-ALRDLHRAGITHNDL 137 (365)
T ss_pred HHHHHhccC-----CCC-CcEEEE--cCCcEEEEEccCCCCHHHh---Ccc--chHHHHHHHHH-HHHHHHHCCCeeCCC
Confidence 888887742 222 566664 3567999999999888632 111 12334444443 377899999999999
Q ss_pred -CCCCCCCC---eeEEecCCch
Q psy12972 567 -HSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 567 -HPGNilv~---~v~liDfG~~ 584 (1578)
||+|||+. .++++|||..
T Consensus 138 ~KP~NILv~~~~~ikLiDFGlA 159 (365)
T PRK09188 138 AKPQNWLMGPDGEAAVIDFQLA 159 (365)
T ss_pred CCcceEEEcCCCCEEEEECccc
Confidence 89999963 4777777754
|
|
| >KOG0908|consensus | Back alignment and domain information |
|---|
Probab=98.99 E-value=6.8e-10 Score=121.12 Aligned_cols=101 Identities=19% Similarity=0.330 Sum_probs=87.4
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
++++|...+. ....+.++|.|||.|||+|+.++|.|..+|.+|.+ ..|.+||.++.+..|..+||.. .||+++|++
T Consensus 8 ~d~df~~~ls-~ag~k~v~Vdfta~wCGPCk~IaP~Fs~lankYp~--aVFlkVdVd~c~~taa~~gV~a-mPTFiff~n 83 (288)
T KOG0908|consen 8 SDSDFQRELS-AAGGKLVVVDFTASWCGPCKRIAPIFSDLANKYPG--AVFLKVDVDECRGTAATNGVNA-MPTFIFFRN 83 (288)
T ss_pred CcHHHHHhhh-ccCceEEEEEEEecccchHHhhhhHHHHhhhhCcc--cEEEEEeHHHhhchhhhcCccc-CceEEEEec
Confidence 4556777653 23467999999999999999999999999999975 6899999999999999999997 999999999
Q ss_pred CccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 939 GRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 939 G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
|..+....| .++..|.+-+.+++..
T Consensus 84 g~kid~~qG-Ad~~gLe~kv~~~~st 108 (288)
T KOG0908|consen 84 GVKIDQIQG-ADASGLEEKVAKYAST 108 (288)
T ss_pred CeEeeeecC-CCHHHHHHHHHHHhcc
Confidence 999888877 6778888888887643
|
|
| >KOG0192|consensus | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.4e-09 Score=129.16 Aligned_cols=138 Identities=20% Similarity=0.169 Sum_probs=104.3
Q ss_pred cccccceEEEEEEecCCCE-EEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTKEGVE-VAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 411 lasaSiaQVhrA~l~~G~~-VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
+|+|++|+||+|..+ |+. ||||+..+.-... .. +-+|++|+.-
T Consensus 49 iG~G~~g~V~~~~~~-g~~~vavK~~~~~~~~~------------------------~~-----------~~~f~~E~~i 92 (362)
T KOG0192|consen 49 LGSGSFGTVYKGKWR-GTDVVAVKIISDPDFDD------------------------ES-----------RKAFRREASL 92 (362)
T ss_pred cccCCceeEEEEEeC-CceeEEEEEecchhcCh------------------------HH-----------HHHHHHHHHH
Confidence 999999999999875 555 9999886542210 00 3467899998
Q ss_pred HHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH-hhcCCCHHHHHHHHHHHH--HHHHHHcC-ccccC
Q psy12972 490 AERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL-LEKGFSLADVDRKLFTAF--AEQIFQTG-FVHAD 565 (1578)
Q Consensus 490 ~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l-~~~~~~~~~v~~~l~~~~--l~~i~~~G-~vH~D 565 (1578)
+.++ .|...|.+..+..+-...-.|||||++|++|.++..- ....++...+...+.++. ++.+|..+ +||+|
T Consensus 93 l~~l----~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrD 168 (362)
T KOG0192|consen 93 LSRL----RHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRD 168 (362)
T ss_pred HHhC----CCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecc
Confidence 8884 3455566666664332235799999999999998654 356788888888887776 78899999 99999
Q ss_pred CCCCCCCCC----eeEEecCCchhhhh
Q psy12972 566 PHSGNDVNT----WLYPVDLGDKFRLV 588 (1578)
Q Consensus 566 pHPGNilv~----~v~liDfG~~~~l~ 588 (1578)
+||.|||+. .+++.|||......
T Consensus 169 LK~~NiLv~~~~~~~KI~DFGlsr~~~ 195 (362)
T KOG0192|consen 169 LKSDNILVDLKGKTLKIADFGLSREKV 195 (362)
T ss_pred cChhhEEEcCCCCEEEECCCccceeec
Confidence 999999954 48999999874433
|
|
| >KOG0583|consensus | Back alignment and domain information |
|---|
Probab=98.98 E-value=3e-09 Score=129.21 Aligned_cols=154 Identities=19% Similarity=0.144 Sum_probs=98.5
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||+||+|.|+.|+. .+|+.||||+....... ... ....+.+. +|.
T Consensus 23 ~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~--------------------~~~------~~~~~~i~------rEi 70 (370)
T KOG0583|consen 23 RTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVS--------------------SKS------QKLDELIK------REI 70 (370)
T ss_pred eeecCCCCeeEEEeeeccCCCeEEEEEechhccc--------------------ccc------cccchhhH------HHH
Confidence 6899999999999985 48999999976532000 000 00111111 455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH---HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF---AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~---l~~i~~~G~vH~ 564 (1578)
.++++++. +...+.+-+++. ..++-++||||+.|+.|-+...- ...+.. ..++.+++-+ ++++|..|++||
T Consensus 71 ~~~~~~~~---HpnI~~l~ev~~-t~~~~~ivmEy~~gGdL~~~i~~-~g~l~E-~~ar~~F~Qlisav~y~H~~gi~HR 144 (370)
T KOG0583|consen 71 SILRRLRS---HPNIIRLLEVFA-TPTKIYIVMEYCSGGDLFDYIVN-KGRLKE-DEARKYFRQLISAVAYCHSRGIVHR 144 (370)
T ss_pred HHHHHhcc---CCCEeEEEEEEe-cCCeEEEEEEecCCccHHHHHHH-cCCCCh-HHHHHHHHHHHHHHHHHHhCCEeeC
Confidence 66666641 223345555553 34557899999999888776432 334444 4444444433 788999999999
Q ss_pred CCCCCCCCC----CeeEEecCCchhhhhhhhhcccCCCCCCCCCC
Q psy12972 565 DPHSGNDVN----TWLYPVDLGDKFRLVLATTLREDGYPDSGEWN 605 (1578)
Q Consensus 565 DpHPGNilv----~~v~liDfG~~~~l~l~~~~~~~g~~D~G~~~ 605 (1578)
|+||.|||+ +.++++|||.+.... ...+++...+.+
T Consensus 145 DLK~ENilld~~~~~~Kl~DFG~s~~~~-----~~~~~l~t~cGs 184 (370)
T KOG0583|consen 145 DLKPENILLDGNEGNLKLSDFGLSAISP-----GEDGLLKTFCGS 184 (370)
T ss_pred CCCHHHEEecCCCCCEEEeccccccccC-----CCCCcccCCCCC
Confidence 999999993 469999999874331 234455555554
|
|
| >cd02988 Phd_like_VIAF Phosducin (Phd)-like family, Viral inhibitor of apoptosis (IAP)-associated factor (VIAF) subfamily; VIAF is a Phd-like protein that functions in caspase activation during apoptosis | Back alignment and domain information |
|---|
Probab=98.97 E-value=7.6e-10 Score=122.01 Aligned_cols=98 Identities=11% Similarity=0.114 Sum_probs=79.3
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+..+|..+|...|...+.+.+++|.||++||++|+.+.|.++++|..+.. ++|++||++.. +..|+|.+ .||++
T Consensus 84 v~eis~~~f~~eV~~as~~~~VVV~Fya~wc~~C~~m~~~l~~LA~k~~~--vkFvkI~ad~~---~~~~~i~~-lPTll 157 (192)
T cd02988 84 VYEISKPDYVREVTEASKDTWVVVHLYKDGIPLCRLLNQHLSELARKFPD--TKFVKIISTQC---IPNYPDKN-LPTIL 157 (192)
T ss_pred EEEeCHHHHHHHHHhcCCCCEEEEEEECCCCchHHHHHHHHHHHHHHCCC--CEEEEEEhHHh---HhhCCCCC-CCEEE
Confidence 45678899998887665567999999999999999999999999999853 89999999753 68999997 99999
Q ss_pred EEcCCccccccCC-------CCCHHHHHHHH
Q psy12972 935 LLTDGRTSFFKEP-------SFSVQKMVEFF 958 (1578)
Q Consensus 935 lf~~G~~~~y~~G-------~~s~~~L~~fi 958 (1578)
+|++|+.+....| ..+.++|..++
T Consensus 158 iyk~G~~v~~ivG~~~~gg~~~~~~~lE~~L 188 (192)
T cd02988 158 VYRNGDIVKQFIGLLEFGGMNTTMEDLEWLL 188 (192)
T ss_pred EEECCEEEEEEeCchhhCCCCCCHHHHHHHH
Confidence 9999987654444 34445555444
|
It was identified as an IAP binding protein through a screen of a human B-cell library using a prototype IAP. VIAF lacks a consensus IAP binding motif and while it does not function as an IAP antagonist, it still plays a regulatory role in the complete activation of caspases. VIAF itself is a substrate for IAP-mediated ubiquitination, suggesting that it may be a target of IAPs in the prevention of cell death. The similarity of VIAF to Phd points to a potential role distinct from apoptosis regulation. Phd functions as a cytosolic regulator of G protein by specifically binding to G protein betagamma (Gbg)-subunits. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-terminal helical domain. |
| >cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding | Back alignment and domain information |
|---|
Probab=98.97 E-value=8.9e-10 Score=111.47 Aligned_cols=89 Identities=11% Similarity=0.130 Sum_probs=74.8
Q ss_pred CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCcccc--ccCCC
Q psy12972 871 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSF--FKEPS 948 (1578)
Q Consensus 871 s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~--y~~G~ 948 (1578)
..+..++|.||++||++|+.+.|.+++++..+ +. +.+..||.+++++++++|+|.+ .||+++|++|.... .+.|.
T Consensus 20 ~~~~~vvv~f~a~wC~~C~~~~~~l~~la~~~-~~-i~~~~vd~d~~~~l~~~~~v~~-vPt~~i~~~g~~~~~~~~~G~ 96 (113)
T cd02975 20 KNPVDLVVFSSKEGCQYCEVTKQLLEELSELS-DK-LKLEIYDFDEDKEKAEKYGVER-VPTTIFLQDGGKDGGIRYYGL 96 (113)
T ss_pred CCCeEEEEEeCCCCCCChHHHHHHHHHHHHhc-Cc-eEEEEEeCCcCHHHHHHcCCCc-CCEEEEEeCCeecceEEEEec
Confidence 34567889999999999999999999999886 43 8999999999999999999998 99999998764321 34487
Q ss_pred CCHHHHHHHHHhhC
Q psy12972 949 FSVQKMVEFFRLKL 962 (1578)
Q Consensus 949 ~s~~~L~~fi~~~l 962 (1578)
.+..++.+|+...+
T Consensus 97 ~~~~el~~~i~~i~ 110 (113)
T cd02975 97 PAGYEFASLIEDIV 110 (113)
T ss_pred CchHHHHHHHHHHH
Confidence 88889999887543
|
PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions. |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.1e-09 Score=121.79 Aligned_cols=136 Identities=18% Similarity=0.169 Sum_probs=91.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+...... .+-+|.+|.
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~------------------------------------~~~~~~~e~ 44 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPD------------------------------------LKAKFLQEA 44 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHH------------------------------------HHHHHHHHH
Confidence 46899999999999975 89999999865432211 011234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.++++ .+..-+.+-.+. ......+|||||++|.++.++.......++...+...+.++. +..+|..|++|+|
T Consensus 45 ~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d 119 (252)
T cd05084 45 RILKQY----SHPNIVRLIGVC-TQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRD 119 (252)
T ss_pred HHHHhC----CCCCcceEEEEE-cCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence 555443 222222222222 223456899999999999876432223456666665555555 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|||++ .++++|||...
T Consensus 120 l~p~nil~~~~~~~kl~dfg~~~ 142 (252)
T cd05084 120 LAARNCLVTEKNVLKISDFGMSR 142 (252)
T ss_pred cchheEEEcCCCcEEECccccCc
Confidence 999999965 48999999764
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.96 E-value=3e-09 Score=127.79 Aligned_cols=138 Identities=17% Similarity=0.140 Sum_probs=90.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+......... ...-.+..|.
T Consensus 7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~----------------------------------~~~~~~~~e~ 52 (333)
T cd05600 7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKL----------------------------------NEVRHVLTER 52 (333)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhh----------------------------------hHHHHHHHHH
Confidence 57999999999999976 699999999864321100 0011234444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-..+ ......+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 53 ~~l~~~~----h~~iv~~~~~~-~~~~~~~lv~e~~~g~~L~~~l~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~d 126 (333)
T cd05600 53 DILTTTK----SEWLVKLLYAF-QDDEYLYLAMEYVPGGDFRTLLN-NLGVLSEDHARFYMAEMFEAVDALHELGYIHRD 126 (333)
T ss_pred HHHHhCC----CCCCccEEEEE-EcCCEEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 4444432 22222222222 22345679999999999988743 223455555554444544 7789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 127 lkp~Nil~~~~~~~kL~Dfg~a~~ 150 (333)
T cd05600 127 LKPENFLIDASGHIKLTDFGLSKG 150 (333)
T ss_pred CCHHHEEECCCCCEEEEeCcCCcc
Confidence 999999965 599999997643
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG0593|consensus | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.2e-09 Score=120.59 Aligned_cols=130 Identities=18% Similarity=0.173 Sum_probs=88.7
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEec-----chhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQY-----IDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~-----P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
-+|.||+|.|++++.+ +|+-||||.-. |.+.+..-++++.++.+ ..
T Consensus 9 kvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqL-----------kH----------------- 60 (396)
T KOG0593|consen 9 KVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQL-----------KH----------------- 60 (396)
T ss_pred ccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhc-----------cc-----------------
Confidence 4799999999999987 69999999754 22222211222111111 00
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
.|+-.+-+.|+... +--||.||||-.-|.+++. -.+|++.+.+-..+.+++ +...|.+++
T Consensus 61 ----~NLVnLiEVFrrkr-------------klhLVFE~~dhTvL~eLe~-~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~ 122 (396)
T KOG0593|consen 61 ----ENLVNLIEVFRRKR-------------KLHLVFEYCDHTVLHELER-YPNGVPSELVKKYLYQLLKAIHFCHKNNC 122 (396)
T ss_pred ----chHHHHHHHHHhcc-------------eeEEEeeecchHHHHHHHh-ccCCCCHHHHHHHHHHHHHHhhhhhhcCe
Confidence 12222222222211 2249999999888877654 457899888888777776 677899999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|||+||.|||++ .++++|||-++
T Consensus 123 IHRDIKPENILit~~gvvKLCDFGFAR 149 (396)
T KOG0593|consen 123 IHRDIKPENILITQNGVVKLCDFGFAR 149 (396)
T ss_pred ecccCChhheEEecCCcEEeccchhhH
Confidence 9999999999976 49999999764
|
|
| >COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.94 E-value=1e-09 Score=123.45 Aligned_cols=68 Identities=54% Similarity=0.916 Sum_probs=63.3
Q ss_pred ccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChh--HHHHHHHHHHHHHHcCCHHHHHhccccC
Q psy12972 635 VSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPT--AQEKFLQLTEAYNILSDAERRKQYDLFG 702 (1578)
Q Consensus 635 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~--a~~~f~~i~~Ay~~L~d~~~R~~yD~~~ 702 (1578)
...++|++|||+++|+..||++|||++++++|||+++... +.++|+.|++||++|+|+..|..||..+
T Consensus 4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~ 73 (237)
T COG2214 4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG 73 (237)
T ss_pred hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence 3579999999999999999999999999999999998543 8999999999999999999999999864
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.2e-09 Score=126.04 Aligned_cols=136 Identities=14% Similarity=0.057 Sum_probs=89.0
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|.||+|+.+ +|+.||||+.++..... . . ....+..|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--~-------------------------~-------~~~~~~~e~~ 47 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIA--K-------------------------D-------EVAHTLTESR 47 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh--h-------------------------H-------HHHHHHHHHH
Confidence 5899999999999864 79999999986432100 0 0 0012234555
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++. +...+.+-..+ .....-+|||||++|..|.+... ....++...+...+.+++ ++.+|..|++|+|+
T Consensus 48 ~l~~l~----hp~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDl 121 (323)
T cd05571 48 VLQNTR----HPFLTALKYSF-QTHDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVSALGYLHSCDVVYRDL 121 (323)
T ss_pred HHHhCC----CCCCCCEEEEE-EcCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCC
Confidence 554442 22222222222 22345679999999999876532 223455555555445544 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|.|||+. .++++|||...
T Consensus 122 kp~NIll~~~~~~kl~DfG~a~ 143 (323)
T cd05571 122 KLENLMLDKDGHIKITDFGLCK 143 (323)
T ss_pred CHHHEEECCCCCEEEeeCCCCc
Confidence 99999975 58999999753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=98.93 E-value=5.1e-09 Score=125.67 Aligned_cols=140 Identities=15% Similarity=0.108 Sum_probs=91.0
Q ss_pred cccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+.. +|+.||||+.......... ...-.+.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~---------------------------------~~~~~~~ 52 (332)
T cd05614 6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKA---------------------------------KTVEHTR 52 (332)
T ss_pred EEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhh---------------------------------hHHHHHH
Confidence 57999999999999853 6899999998643110000 0001234
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
.|.+.+.+++ +++.+....-.......-+|||||++|..+.+... ....++...+...+.+++ +..+|..|++
T Consensus 53 ~e~~~l~~l~----~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 127 (332)
T cd05614 53 TERNVLEHVR----QSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLY-QRDNFSEDEVRFYSGEIILALEHLHKLGIV 127 (332)
T ss_pred HHHHHHHhcc----CCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence 4554444442 33332222112222344579999999999877632 234566666655555555 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+|++|.|||+. .++++|||....
T Consensus 128 HrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 128 YRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred ecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 999999999975 599999997643
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.7e-09 Score=126.05 Aligned_cols=135 Identities=14% Similarity=0.105 Sum_probs=89.1
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|+||+|+.. +|+.||||+..+..... . + ....+.+|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~--~-------------------------~-------~~~~~~~E~~ 47 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIA--K-------------------------D-------EVAHTLTESR 47 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh--h-------------------------h-------HHHHHHHHHH
Confidence 5899999999999964 79999999987532110 0 0 0012344555
Q ss_pred HHHHHHHhhCCCCCe-eecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYV-YIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v-~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++. ++.+ .+-..+ ......+|||||++|..+.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 48 ~l~~l~-----hp~iv~~~~~~-~~~~~~~lv~Ey~~~g~L~~~l~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD 120 (328)
T cd05593 48 VLKNTR-----HPFLTSLKYSF-QTKDRLCFVMEYVNGGELFFHLS-RERVFSEDRTRFYGAEIVSALDYLHSGKIVYRD 120 (328)
T ss_pred HHHhCC-----CCCCcceEEEE-EcCCEEEEEEeCCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecc
Confidence 554432 2322 222222 22345689999999999876532 223456665555555544 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 121 ikp~NIll~~~~~~kL~DfG~~~ 143 (328)
T cd05593 121 LKLENLMLDKDGHIKITDFGLCK 143 (328)
T ss_pred cCHHHeEECCCCcEEEecCcCCc
Confidence 999999975 58999999753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=98.93 E-value=5e-09 Score=123.92 Aligned_cols=137 Identities=15% Similarity=0.146 Sum_probs=90.0
Q ss_pred cccccccceEEEEEEecC-----------------CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKE-----------------GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVIN 471 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~-----------------G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~ 471 (1578)
+.||+|++|.||+|+..+ +..||||+.++.....
T Consensus 11 ~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~----------------------------- 61 (304)
T cd05096 11 EKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKN----------------------------- 61 (304)
T ss_pred eEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHH-----------------------------
Confidence 569999999999997532 3479999988754221
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------
Q psy12972 472 ELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE--------------- 536 (1578)
Q Consensus 472 e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~--------------- 536 (1578)
...+|.+|.+.+.+++ +...+.+-..+. .....+|+|||++|.+|.++.....
T Consensus 62 -------~~~~~~~E~~~l~~l~----h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 129 (304)
T cd05096 62 -------ARNDFLKEVKILSRLK----DPNIIRLLGVCV-DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPA 129 (304)
T ss_pred -------HHHHHHHHHHHHhhcC----CCCeeEEEEEEe-cCCceEEEEecCCCCcHHHHHHhccccccccccccccccc
Confidence 0123556666666553 222233323322 2345689999999999987643211
Q ss_pred ---cCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 537 ---KGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 537 ---~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
..++...+...+.++. +..+|..|++|+|++|.||++. .+++.|||....
T Consensus 130 ~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~ 187 (304)
T cd05096 130 HCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRN 187 (304)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCcccee
Confidence 1123334444444444 7789999999999999999965 489999997643
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=98.92 E-value=5.7e-09 Score=124.97 Aligned_cols=137 Identities=17% Similarity=0.108 Sum_probs=87.0
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|+||+|+.+ +|+.||||+........- . .+..+..|..
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------------------------~------~~~~~~~e~~ 47 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNR----------------------------K------EQKHIMAERN 47 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh----------------------------h------HHHHHHHHHH
Confidence 5899999999999864 799999999865321100 0 0001111211
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
. +.+.+.+...+.+-..+ ......+|||||++|..+.+... ....++...+...+.+++ +..+|..|++|+|+
T Consensus 48 ~---~l~~~~hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dl 122 (325)
T cd05604 48 V---LLKNVKHPFLVGLHYSF-QTTEKLYFVLDFVNGGELFFHLQ-RERSFPEPRARFYAAEIASALGYLHSINIVYRDL 122 (325)
T ss_pred H---HHHhCCCCCCccEEEEE-ecCCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence 1 11222332223332332 22345689999999999866532 233456655555554544 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
||.|||+. .++++|||...
T Consensus 123 kp~NIll~~~~~~kL~DfG~~~ 144 (325)
T cd05604 123 KPENILLDSQGHVVLTDFGLCK 144 (325)
T ss_pred CHHHeEECCCCCEEEeecCCcc
Confidence 99999975 58999999753
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=98.92 E-value=5e-09 Score=125.30 Aligned_cols=136 Identities=18% Similarity=0.131 Sum_probs=87.8
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|+||+|+.+ +|+.||||+.++..... + ... -.+..|.+
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~------------------------~~~-------~~~~~e~~ 47 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQ---D------------------------DDV-------ECTMTEKR 47 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh---c------------------------cHH-------HHHHHHHH
Confidence 5899999999999975 68999999987542110 0 000 01122322
Q ss_pred HHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+... .+++. +.+-..+ ......+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 48 ~l~~~----~~h~~iv~~~~~~-~~~~~~~iv~Ey~~~g~L~~~i~-~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~d 121 (320)
T cd05590 48 ILSLA----RNHPFLTQLYCCF-QTPDRLFFVMEFVNGGDLMFHIQ-KSRRFDEARARFYAAEITSALMFLHDKGIIYRD 121 (320)
T ss_pred HHHhc----cCCCchhceeeEE-EcCCEEEEEEcCCCCchHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCC
Confidence 22222 12232 2222222 22345679999999999876532 234566666655555554 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 122 lkp~NIli~~~~~~kL~DfG~~~ 144 (320)
T cd05590 122 LKLDNVLLDHEGHCKLADFGMCK 144 (320)
T ss_pred CCHHHeEECCCCcEEEeeCCCCe
Confidence 999999975 58999999753
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=98.92 E-value=5.8e-09 Score=124.67 Aligned_cols=136 Identities=15% Similarity=0.086 Sum_probs=87.1
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|+||+|+.+ +|+.||||+........ ..+ . -.+..|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~---------------------------~------~~~~~e~~ 47 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQ-DDD---------------------------V------DCTMTEKR 47 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhh-hhH---------------------------H------HHHHHHHH
Confidence 5899999999999975 68999999986542110 000 0 01123333
Q ss_pred HHHHHHHhhCCCCCe-eecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYV-YIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v-~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
-+... .+++.| .+-..+ .....-+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 48 il~~~----~~hp~i~~~~~~~-~~~~~~~lv~E~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD 121 (321)
T cd05591 48 ILALA----AKHPFLTALHCCF-QTKDRLFFVMEYVNGGDLMFQIQ-RSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRD 121 (321)
T ss_pred HHHhc----cCCCCccceeeEE-EcCCeEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 33222 223322 222222 12344579999999998876532 233456555555555544 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 122 ikp~Nill~~~~~~kL~Dfg~~~ 144 (321)
T cd05591 122 LKLDNILLDAEGHCKLADFGMCK 144 (321)
T ss_pred CCHHHeEECCCCCEEEeecccce
Confidence 999999965 58999999753
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=98.91 E-value=6e-09 Score=127.75 Aligned_cols=136 Identities=13% Similarity=0.032 Sum_probs=87.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+..-.. . .+ ..-.+.+|.
T Consensus 7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~--~--------------------------~~------~~~~~~~E~ 52 (381)
T cd05626 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVL--N--------------------------RN------QVAHVKAER 52 (381)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh--h--------------------------hH------HHHHHHHHH
Confidence 56999999999999864 7899999998632100 0 00 011234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-..+. -....+|||||++|..|.++.. ....++...+...+.+++ ++.+|..|++|+|
T Consensus 53 ~il~~l~----h~~iv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~-~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrD 126 (381)
T cd05626 53 DILAEAD----NEWVVKLYYSFQ-DKDNLYFVMDYIPGGDMMSLLI-RMEVFPEVLARFYIAELTLAIESVHKMGFIHRD 126 (381)
T ss_pred HHHHhcC----CCCeeeeEEEEe-cCCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecC
Confidence 4444432 222222223332 2345689999999999877632 223344444433444443 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCch
Q psy12972 566 PHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~ 584 (1578)
+||.|||+. .++++|||..
T Consensus 127 lKp~Nili~~~~~~kL~DFGl~ 148 (381)
T cd05626 127 IKPDNILIDLDGHIKLTDFGLC 148 (381)
T ss_pred CcHHHEEECCCCCEEEeeCcCC
Confidence 999999964 5888898864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=98.91 E-value=7.2e-09 Score=124.11 Aligned_cols=134 Identities=14% Similarity=0.113 Sum_probs=87.9
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|+||+|+.. +|+.||||+..+..... . .....+..|.+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~--~--------------------------------~~~~~~~~e~~ 47 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA--K--------------------------------DEVAHTLTENR 47 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh--h--------------------------------hHHHHHHHHHH
Confidence 5899999999999854 89999999986532110 0 00012234554
Q ss_pred HHHHHHHhhCCCCCe-eecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCcccc
Q psy12972 489 NAERCSKDLAHLPYV-YIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFVHA 564 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v-~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~vH~ 564 (1578)
.+.++. ++.| .+-..+ ......+|||||++|..|.+... ....++...+...+.+++ +..+|. .|++|+
T Consensus 48 ~l~~~~-----hp~i~~~~~~~-~~~~~~~lv~E~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHr 120 (325)
T cd05594 48 VLQNSR-----HPFLTALKYSF-QTHDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 120 (325)
T ss_pred HHHhCC-----CCCCCceEEEE-EcCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEec
Confidence 444432 2322 222222 23345689999999998876532 233466666655555555 778896 799999
Q ss_pred CCCCCCCCCC---eeEEecCCch
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~ 584 (1578)
|++|.|||+. .++++|||..
T Consensus 121 Dikp~NIll~~~~~~kL~Dfg~~ 143 (325)
T cd05594 121 DLKLENLMLDKDGHIKITDFGLC 143 (325)
T ss_pred CCCCCeEEECCCCCEEEecCCCC
Confidence 9999999975 5899999965
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.8e-09 Score=128.36 Aligned_cols=135 Identities=16% Similarity=0.130 Sum_probs=88.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+..-... .+... .++.|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----------------------------~~~~~------~~~~e~ 52 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLE----------------------------KEQVA------HIRAER 52 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhh----------------------------hhhHH------HHHHHH
Confidence 67999999999999975 79999999986421100 00001 123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+.++ .+ +. +++.+..+ ....+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|
T Consensus 53 ~~l~~l----~~-~~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~~~L~~lH~~givH 124 (360)
T cd05627 53 DILVEA----DG-AW--VVKMFYSFQDKRNLYLIMEFLPGGDMMTLLM-KKDTLSEEATQFYIAETVLAIDAIHQLGFIH 124 (360)
T ss_pred HHHHhC----CC-CC--EeeEEEEEEcCCEEEEEEeCCCCccHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEc
Confidence 444333 22 22 33333222 234589999999999987642 233456555555555544 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|+||.|||+. .++++|||...
T Consensus 125 rDLkp~NIli~~~~~vkL~DfG~~~ 149 (360)
T cd05627 125 RDIKPDNLLLDAKGHVKLSDFGLCT 149 (360)
T ss_pred cCCCHHHEEECCCCCEEEeeccCCc
Confidence 99999999964 58999999754
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=98.90 E-value=6.4e-09 Score=126.62 Aligned_cols=135 Identities=16% Similarity=0.122 Sum_probs=89.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+...... .+... .++.|.
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----------------------------~~~~~------~~~~E~ 52 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLE----------------------------KEQVG------HIRAER 52 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH----------------------------hhHHH------HHHHHH
Confidence 57999999999999865 79999999986321100 00001 123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+.++ .+ + .|++.+..+ ....+|||||++|..|.+... ....++...+...+.+++ ++.+|..|++|
T Consensus 53 ~il~~~----~~-~--~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~~aL~~lH~~givH 124 (363)
T cd05628 53 DILVEA----DS-L--WVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLM-KKDTLTEEETQFYIAETVLAIDSIHQLGFIH 124 (363)
T ss_pred HHHHhC----CC-C--CcceEEEEEecCCeEEEEEcCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 444333 22 2 233333222 234579999999999887643 234566666655555555 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|+||.|||+. .++++|||...
T Consensus 125 rDlKp~NILi~~~~~vkL~DFGla~ 149 (363)
T cd05628 125 RDIKPDNLLLDSKGHVKLSDFGLCT 149 (363)
T ss_pred cCCCHHHeEECCCCCEEEeeccCcc
Confidence 99999999974 58999999754
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=98.90 E-value=7e-09 Score=126.82 Aligned_cols=135 Identities=14% Similarity=0.072 Sum_probs=87.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+..-.. . .+ ..-.+.+|+
T Consensus 7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~----------------~------------~~------~~~~~~~E~ 52 (376)
T cd05598 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVL----------------M------------RN------QAAHVKAER 52 (376)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHH----------------h------------hh------hHHHHHHHH
Confidence 67999999999999964 7999999987532100 0 00 001234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcC-CCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKG-FSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~-~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +...+.+-..+. ....-+|||||++|..|.++. ...+ ++...+...+.+++ +..+|..|++|+
T Consensus 53 ~il~~l~----h~~iv~~~~~~~-~~~~~~lv~E~~~~g~L~~~i--~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHr 125 (376)
T cd05598 53 DILAEAD----NEWVVKLYYSFQ-DKDNLYFVMDYIPGGDMMSLL--IRLGIFEEDLARFYIAELTCAIESVHKMGFIHR 125 (376)
T ss_pred HHHHhCC----CCCcceEEEEEE-cCCEEEEEEeCCCCCcHHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC
Confidence 4444432 222222222222 234568999999999998874 2333 44444333344443 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCch
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~ 584 (1578)
|++|+|||++ .++++|||..
T Consensus 126 Dlkp~Nill~~~~~ikL~DFG~a 148 (376)
T cd05598 126 DIKPDNILIDRDGHIKLTDFGLC 148 (376)
T ss_pred CCCHHHEEECCCCCEEEEeCCCC
Confidence 9999999965 5899999975
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.90 E-value=8.4e-09 Score=110.33 Aligned_cols=135 Identities=19% Similarity=0.257 Sum_probs=97.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.+++.|.-|-++.+-. -|.+++||..-|-- +..+.+=..++ .| --++||+
T Consensus 2 ~~i~~GAEa~i~~~~~-~g~~av~K~Ri~K~------------------------YR~p~LD~klr----r~-Rt~~Ear 51 (204)
T COG3642 2 DLIKQGAEAIIYLTDF-LGLPAVVKERIPKR------------------------YRHPELDEKLR----RE-RTRREAR 51 (204)
T ss_pred chhhCCcceeEEeeec-cCcceEEEeecCcc------------------------cCChHHHHHHH----HH-HHHHHHH
Confidence 4678899999998855 45679999764432 22222211111 11 1278999
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHS 568 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHP 568 (1578)
.+.+++.. +|.+|.+|.-....-.||||||+|..+.|... .. ...+.+.+-.. .--||..|++|+||-+
T Consensus 52 il~~a~~~-----GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~--~~---~~~~~r~vG~~-vg~lH~~givHGDLTt 120 (204)
T COG3642 52 ILAKAREA-----GVPVPIVYDVDPDNGLIVMEYIEGELLKDALE--EA---RPDLLREVGRL-VGKLHKAGIVHGDLTT 120 (204)
T ss_pred HHHHHHHc-----CCCCCeEEEEcCCCCEEEEEEeCChhHHHHHH--hc---chHHHHHHHHH-HHHHHhcCeecCCCcc
Confidence 99999864 68899999877777889999999999987633 22 23456665554 4457999999999999
Q ss_pred CCCCCC--eeEEecCCch
Q psy12972 569 GNDVNT--WLYPVDLGDK 584 (1578)
Q Consensus 569 GNilv~--~v~liDfG~~ 584 (1578)
.||+++ ++++||||++
T Consensus 121 sNiIl~~~~i~~IDfGLg 138 (204)
T COG3642 121 SNIILSGGRIYFIDFGLG 138 (204)
T ss_pred ceEEEeCCcEEEEECCcc
Confidence 999965 4999999975
|
|
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=98.90 E-value=7.2e-09 Score=124.10 Aligned_cols=137 Identities=18% Similarity=0.078 Sum_probs=84.8
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|.||+|+.. +|+.||+|+........- ..+.++..|..
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~----------------------------------~~~~~~~~e~~ 47 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKK----------------------------------KEEKHIMSERN 47 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhh----------------------------------hHHHHHHHHHH
Confidence 5899999999999965 688999999864211000 00111112211
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
. +...+.+...+.+-..+ ......+|||||++|..+.+... ....+....+...+.+++ +..+|..|++|+|+
T Consensus 48 ~---~l~~~~h~~Iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDl 122 (325)
T cd05602 48 V---LLKNVKHPFLVGLHFSF-QTADKLYFVLDYINGGELFYHLQ-RERCFLEPRARFYAAEIASALGYLHSLNIVYRDL 122 (325)
T ss_pred H---HHHhCCCCCCCceeEEE-EcCCeEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence 1 11222222222222222 22345689999999999877643 223344444444444444 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
||+|||+. .++++|||...
T Consensus 123 kp~Nili~~~~~~kl~DfG~a~ 144 (325)
T cd05602 123 KPENILLDSQGHIVLTDFGLCK 144 (325)
T ss_pred CHHHeEECCCCCEEEccCCCCc
Confidence 99999974 58999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >KOG0577|consensus | Back alignment and domain information |
|---|
Probab=98.90 E-value=2e-09 Score=128.82 Aligned_cols=146 Identities=20% Similarity=0.204 Sum_probs=101.5
Q ss_pred CCChhhhccccCCcccccccceEEEEEEe-cCCCEEEEEEe-cchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHH
Q psy12972 396 GCTHSQLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQ-YIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINEL 473 (1578)
Q Consensus 396 G~~~~~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq-~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 473 (1578)
..+++.+|..+ +-||-||||-||-|+. ++.+.||||-. +-|- ...+.|
T Consensus 21 k~DPEklf~dL--rEIGHGSFGAVYfArd~~n~evVAIKKMsySGK----------------------------Qs~EKW 70 (948)
T KOG0577|consen 21 KDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK----------------------------QSNEKW 70 (948)
T ss_pred cCCHHHHHHHH--HHhcCCccceeEEeeccCccceeeeeecccccc----------------------------ccHHHH
Confidence 44688888877 5699999999999995 57889999843 1111 111222
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH-
Q psy12972 474 KVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF- 552 (1578)
Q Consensus 474 ~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~- 552 (1578)
. |...|.+-+.+++ +...|---..|-. -+.-+||||||=| +.+|+......++...+|+.+...++
T Consensus 71 q-------DIlKEVrFL~~l~----HPntieYkgCyLr-e~TaWLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~ 137 (948)
T KOG0577|consen 71 Q-------DILKEVRFLRQLR----HPNTIEYKGCYLR-EHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQ 137 (948)
T ss_pred H-------HHHHHHHHHHhcc----CCCcccccceeec-cchHHHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 2 2223333344432 2222222222311 1345899999977 67788777788888888988887777
Q ss_pred -HHHHHHcCccccCCCCCCCCCC---eeEEecCCch
Q psy12972 553 -AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 553 -l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
+..+|.++.+|+|++.||||++ .|++-|||.+
T Consensus 138 gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSA 173 (948)
T KOG0577|consen 138 GLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSA 173 (948)
T ss_pred HHHHHHHhhHHhhhccccceEecCCCeeeeccccch
Confidence 8999999999999999999975 5899999975
|
|
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=98.90 E-value=7.4e-09 Score=123.90 Aligned_cols=137 Identities=16% Similarity=0.088 Sum_probs=86.3
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|+||+|+.. +|+.||||+..+.....- .+ ..++..|..
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~---------------------------~~-------~~~~~~e~~ 47 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKK---------------------------KE-------QKHIMAERN 47 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhh---------------------------hH-------HHHHHHHHH
Confidence 5899999999999975 799999999864321000 00 001111211
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
. +.+.+.+..-+.+-..+. .....+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|+
T Consensus 48 ~---~~~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~di 122 (323)
T cd05575 48 V---LLKNVKHPFLVGLHYSFQ-TADKLYFVLDYVNGGELFFHLQ-RERSFPEPRARFYAAEIASALGYLHSLNIIYRDL 122 (323)
T ss_pred H---HHhhCCCCCCCCeeEEEE-eCCEEEEEEcCCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCC
Confidence 1 112222322233323322 2345689999999999876532 223455555554444444 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|.|||+. .++++|||...
T Consensus 123 kp~NIll~~~~~~kl~Dfg~~~ 144 (323)
T cd05575 123 KPENILLDSQGHVVLTDFGLCK 144 (323)
T ss_pred CHHHeEECCCCcEEEeccCCCc
Confidence 99999965 58999999753
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.89 E-value=7.6e-09 Score=116.49 Aligned_cols=148 Identities=20% Similarity=0.253 Sum_probs=104.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
++||.|--+-||.|...+|.+||||.-|-|.. ++ +.+.+....+...-...|+.-. + +.-.+|.+
T Consensus 97 ~~IGvGKEsdVY~~~~~~g~~~~vKfHR~Grt-sF-------rkvk~~R~y~~~~~h~sWl~~s---R----l~A~rEf~ 161 (304)
T COG0478 97 TKIGVGKESDVYVAIDPKGRKVAVKFHRLGRT-SF-------RKVKRNRDYLADKEHGSWLYVS---R----LAAEREFE 161 (304)
T ss_pred cccccCccceEEEEECCCCCEEEEEEeecCch-hh-------hhhcchhhhhccccCcchhhhH---H----HHHHHHHH
Confidence 78999999999999999999999999998833 22 2222222222222233343211 1 12255666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHS 568 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHP 568 (1578)
.+.++.. .++.||+|+ -.+++++|||+|+|.+|..+.. ..-+++++...+++.+-.. ...|+||||+.+
T Consensus 162 ~L~~L~~-----~G~~VP~P~--~~nRHaVvMe~ieG~eL~~~r~---~~en~~~il~~il~~~~~~-~~~GiVHGDlSe 230 (304)
T COG0478 162 ALQRLYP-----EGVKVPKPI--AWNRHAVVMEYIEGVELYRLRL---DVENPDEILDKILEEVRKA-YRRGIVHGDLSE 230 (304)
T ss_pred HHHHhhh-----cCCCCCCcc--ccccceeeeehcccceeecccC---cccCHHHHHHHHHHHHHHH-HHcCccccCCch
Confidence 6766652 358999998 4578999999999999988631 2345678888888765544 499999999999
Q ss_pred CCCCCC---eeEEecCC
Q psy12972 569 GNDVNT---WLYPVDLG 582 (1578)
Q Consensus 569 GNilv~---~v~liDfG 582 (1578)
-||+++ .+++|||.
T Consensus 231 fNIlV~~dg~~~vIDwP 247 (304)
T COG0478 231 FNILVTEDGDIVVIDWP 247 (304)
T ss_pred heEEEecCCCEEEEeCc
Confidence 999965 46777766
|
|
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.4e-09 Score=126.39 Aligned_cols=137 Identities=16% Similarity=0.141 Sum_probs=89.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+..-.. . .. ..-.|..|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~--------------------------~~------~~~~~~~e~ 52 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEML--K--------------------------RA------ETACFREER 52 (331)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh--h--------------------------hh------hHHHHHHHH
Confidence 57999999999999965 7999999998632100 0 00 001123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
..+..+ . ++. |+.++.. .....+|||||++|..|.++..-....++...+...+.+++ +..+|..|++|
T Consensus 53 ~~l~~~----~-~~~--i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 125 (331)
T cd05597 53 DVLVNG----D-RRW--ITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVH 125 (331)
T ss_pred HHHHhC----C-CCC--CCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEE
Confidence 333332 1 222 2222221 22346899999999999887542234566555555555544 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchhh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|++|.|||+. .++++|||....
T Consensus 126 ~dlkp~Nill~~~~~~kl~Dfg~~~~ 151 (331)
T cd05597 126 RDIKPDNVLLDKNGHIRLADFGSCLR 151 (331)
T ss_pred CCCCHHHEEECCCCCEEEEECCceee
Confidence 99999999975 589999997543
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >TIGR01295 PedC_BrcD bacteriocin transport accessory protein, putative | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.1e-09 Score=110.14 Aligned_cols=96 Identities=14% Similarity=0.196 Sum_probs=76.9
Q ss_pred eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccch-----------hhHhHcC
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQ-----------GLARRLG 925 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~-----------~L~~k~g 925 (1578)
.+|.++|.+.+ ..++..+|+|+++||++|+.+.|.+++++++.+ +.+..||.+.+. ++.++++
T Consensus 10 ~it~~~~~~~i---~~~~~~iv~f~~~~Cp~C~~~~P~l~~~~~~~~---~~~y~vdvd~~~~~~~~~~~~~~~~~~~~~ 83 (122)
T TIGR01295 10 VTTVVRALEAL---DKKETATFFIGRKTCPYCRKFSGTLSGVVAQTK---APIYYIDSENNGSFEMSSLNDLTAFRSRFG 83 (122)
T ss_pred ecCHHHHHHHH---HcCCcEEEEEECCCChhHHHHhHHHHHHHHhcC---CcEEEEECCCccCcCcccHHHHHHHHHHcC
Confidence 56777888877 457789999999999999999999999999832 678888887543 4556654
Q ss_pred ----ccccCCcEEEEcCCccccccCC-CCCHHHHHHHHH
Q psy12972 926 ----VGSQLPQIALLTDGRTSFFKEP-SFSVQKMVEFFR 959 (1578)
Q Consensus 926 ----V~~~~PTl~lf~~G~~~~y~~G-~~s~~~L~~fi~ 959 (1578)
|.+ .||+++|++|+.+....| ..+.++|.+|+.
T Consensus 84 i~~~i~~-~PT~v~~k~Gk~v~~~~G~~~~~~~l~~~~~ 121 (122)
T TIGR01295 84 IPTSFMG-TPTFVHITDGKQVSVRCGSSTTAQELQDIAA 121 (122)
T ss_pred CcccCCC-CCEEEEEeCCeEEEEEeCCCCCHHHHHHHhh
Confidence 555 999999999998877667 566889988863
|
This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris. |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=6.9e-09 Score=125.80 Aligned_cols=132 Identities=17% Similarity=0.153 Sum_probs=87.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+......... .-.+.+|+
T Consensus 80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~E~ 123 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTV------------------------------------RRQICREI 123 (353)
T ss_pred hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHH------------------------------------HHHHHHHH
Confidence 57999999999999965 799999999854321110 01234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-.++ +......+||||++|.+|.+... .+...+...+.+++ +..+|..|++|+|
T Consensus 124 ~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~-----~~~~~~~~i~~qi~~aL~~LH~~~ivHrD 193 (353)
T PLN00034 124 EILRDVN----HPNVVKCHDMF-DHNGEIQVLLEFMDGGSLEGTHI-----ADEQFLADVARQILSGIAYLHRRHIVHRD 193 (353)
T ss_pred HHHHhCC----CCCcceeeeEe-ccCCeEEEEEecCCCCccccccc-----CCHHHHHHHHHHHHHHHHHHHHCCEeecC
Confidence 5555543 22223333333 23345679999999998875421 22233333333333 7789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 194 lkp~NIll~~~~~~kL~DfG~~~~ 217 (353)
T PLN00034 194 IKPSNLLINSAKNVKIADFGVSRI 217 (353)
T ss_pred CCHHHEEEcCCCCEEEccccccee
Confidence 999999975 599999997643
|
|
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=98.88 E-value=8.5e-09 Score=123.11 Aligned_cols=136 Identities=15% Similarity=0.082 Sum_probs=86.3
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|.||+|+.. +|+.||||+.+...... ..+. . .+..|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~--------------------------~-------~~~~e~~ 47 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLE-DDDV--------------------------E-------CTMVERR 47 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhhH--------------------------H-------HHHHHHH
Confidence 5899999999999965 68999999987543210 0000 0 0011211
Q ss_pred HHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.. ..+++. +.+-..+. .....+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 48 ~l~~----~~~hp~i~~~~~~~~-~~~~~~lv~e~~~gg~L~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~d 121 (316)
T cd05592 48 VLAL----AWEHPFLTHLFCTFQ-TKEHLFFVMEYLNGGDLMFHIQ-SSGRFDEARARFYAAEIICGLQFLHKKGIIYRD 121 (316)
T ss_pred HHHh----ccCCCCccceeeEEE-cCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCC
Confidence 1111 112332 22222221 2234579999999999876532 233466666555555554 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 122 lkp~Nill~~~~~~kL~Dfg~a~ 144 (316)
T cd05592 122 LKLDNVLLDKDGHIKIADFGMCK 144 (316)
T ss_pred CCHHHeEECCCCCEEEccCcCCe
Confidence 999999975 59999999764
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=98.88 E-value=5.9e-09 Score=125.35 Aligned_cols=138 Identities=14% Similarity=0.062 Sum_probs=88.4
Q ss_pred cccccccceEEEEEEe------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVT------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+. .+++.||||+...+.... ..-.
T Consensus 13 ~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 56 (338)
T cd05102 13 KVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATAS------------------------------------EHKA 56 (338)
T ss_pred eEeccCCcceEEEEEEeccCCcccchhhheeccccccchH------------------------------------HHHH
Confidence 6799999999999974 246789999876432110 0012
Q ss_pred HHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-------------------------
Q psy12972 483 FLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE------------------------- 536 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~------------------------- 536 (1578)
+.+|.+.+.++. +++. +.+-..+......-+++|||++|.+|.+......
T Consensus 57 ~~~E~~~l~~l~----~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (338)
T cd05102 57 LMSELKILIHIG----NHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSR 132 (338)
T ss_pred HHHHHHHHHHhc----cCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhc
Confidence 345555555553 2232 2222222222233579999999999987643111
Q ss_pred ------------------------------------cCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---e
Q psy12972 537 ------------------------------------KGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---W 575 (1578)
Q Consensus 537 ------------------------------------~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~ 575 (1578)
..++...+...+.++. +..+|..|++|+|+||.|||+. .
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~ 212 (338)
T cd05102 133 VDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNV 212 (338)
T ss_pred cccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCc
Confidence 1233444444444544 7889999999999999999975 4
Q ss_pred eEEecCCchhh
Q psy12972 576 LYPVDLGDKFR 586 (1578)
Q Consensus 576 v~liDfG~~~~ 586 (1578)
++++|||....
T Consensus 213 ~kl~DfG~a~~ 223 (338)
T cd05102 213 VKICDFGLARD 223 (338)
T ss_pred EEEeecccccc
Confidence 89999997643
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0594|consensus | Back alignment and domain information |
|---|
Probab=98.88 E-value=7.1e-09 Score=120.19 Aligned_cols=143 Identities=18% Similarity=0.225 Sum_probs=91.5
Q ss_pred hhccccCCcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHH
Q psy12972 401 QLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQ 479 (1578)
Q Consensus 401 ~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 479 (1578)
+.|..++. +|.|++|.||+|+. .+|+.||+|.++-..++ +. .|.. .
T Consensus 11 ~~~~~~ek--lGeGtyg~Vykar~~~~g~~VALKkirl~~~~----------------EG-~P~t------------a-- 57 (323)
T KOG0594|consen 11 FDYEKVEK--LGEGTYGVVYKARSKRTGKFVALKKIRLEFEE----------------EG-VPST------------A-- 57 (323)
T ss_pred HHHHHHHH--hCCCCceEEEEEEEecCCCEEEEEEEeccccc----------------cC-CCch------------h--
Confidence 44555544 99999999999995 48999999998744331 00 1111 1
Q ss_pred HHhHHHHHHHHHHHHHhhCCCC-CeeecEEeeCCCC-----ceEEEEeccCCCcCCchhhHhh---cCCCHHHHHHHHHH
Q psy12972 480 ELDFLNEGRNAERCSKDLAHLP-YVYIPRILWDKSS-----TRVLTTEFIDGVKISDKEGLLE---KGFSLADVDRKLFT 550 (1578)
Q Consensus 480 ElDf~~Ea~n~~r~~~~~~~~~-~v~vP~v~~~~~t-----~~VLVME~i~G~~l~d~~~l~~---~~~~~~~v~~~l~~ 550 (1578)
.+|..-+++++ +.. .|..-.++...+. .-.||+||++- .+.+...... .|++...+-..+.+
T Consensus 58 ----iREisllk~L~----~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Q 128 (323)
T KOG0594|consen 58 ----IREISLLKRLS----HANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQ 128 (323)
T ss_pred ----hHHHHHHHHhC----CCcceEEEEeeeeecccccccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHH
Confidence 22333333333 222 3455555543331 34589999953 4554433222 46776555555555
Q ss_pred HH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 551 AF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 551 ~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++ +..+|.+|++|||+||.|||++ .++++|||.+.
T Consensus 129 ll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAr 168 (323)
T KOG0594|consen 129 LLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLAR 168 (323)
T ss_pred HHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHH
Confidence 55 7789999999999999999965 58999999875
|
|
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=98.88 E-value=9e-09 Score=122.98 Aligned_cols=137 Identities=16% Similarity=0.089 Sum_probs=84.9
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|+||+|+.. +|+.||||+........ . ..+.++..|..
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---~-------------------------------~~~~~~~~e~~ 47 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILK---K-------------------------------KEQNHIMAERN 47 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH---h-------------------------------hHHHHHHHHHH
Confidence 5899999999999975 78999999986432110 0 00011111211
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
. +...+.+...+.+-..+. .....+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|+|+
T Consensus 48 ~---~l~~~~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dl 122 (321)
T cd05603 48 V---LLKNLKHPFLVGLHYSFQ-TAEKLYFVLDYVNGGELFFHLQ-RERCFLEPRARFYAAEVASAIGYLHSLNIIYRDL 122 (321)
T ss_pred H---HHHhCCCCCccceeeEEE-cCCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccC
Confidence 1 111222222222222221 2345679999999999865432 223455555544444444 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|.||++. .++++|||...
T Consensus 123 kp~NIll~~~~~~kl~Dfg~~~ 144 (321)
T cd05603 123 KPENILLDSQGHVVLTDFGLCK 144 (321)
T ss_pred CHHHeEECCCCCEEEccCCCCc
Confidence 99999964 59999999653
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=98.88 E-value=9.1e-09 Score=123.17 Aligned_cols=136 Identities=14% Similarity=0.052 Sum_probs=89.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.++..... ..+ .-.+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~---------------------------------~~~~~~e~ 51 (324)
T cd05587 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQ-DDD---------------------------------VECTMVEK 51 (324)
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------------HHHHHHHH
Confidence 57999999999999965 68899999987543110 000 00123444
Q ss_pred HHHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+..+. +.+. ++..+. ......+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|
T Consensus 52 ~~l~~~~----~~~~--i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH 124 (324)
T cd05587 52 RVLALPG----KPPF--LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-QVGKFKEPHAVFYAAEIAIGLFFLHSKGIIY 124 (324)
T ss_pred HHHHhcC----CCCc--eeeeEEEEEcCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 4444332 2222 232222 12345679999999999876532 223355555555555554 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|+||.|||+. .++++|||...
T Consensus 125 ~dlkp~Nill~~~~~~kL~Dfg~~~ 149 (324)
T cd05587 125 RDLKLDNVMLDAEGHIKIADFGMCK 149 (324)
T ss_pred cCCCHHHeEEcCCCCEEEeecCcce
Confidence 99999999975 58999999753
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=98.88 E-value=8.5e-09 Score=123.10 Aligned_cols=135 Identities=17% Similarity=0.139 Sum_probs=87.7
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|+||+|+.+ +|+.||||+.++..... ..+.. ....|.+
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~---------------------------------~~~~e~~ 47 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLI-DDDVE---------------------------------CTMVEKR 47 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-cchHH---------------------------------HHHHHHH
Confidence 5899999999999976 79999999987643210 00000 0122333
Q ss_pred HHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
.+... . +++ .+++++. .....-+|||||++|..|.+... ....++...+...+.+++ ++.+|..|++|+
T Consensus 48 ~l~~~---~-~~~--~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHr 120 (316)
T cd05620 48 VLALA---W-ENP--FLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQ-DKGRFDLYRATFYAAEIVCGLQFLHSKGIIYR 120 (316)
T ss_pred HHHhc---c-CCC--CccCeeEEEEeCCEEEEEECCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 33221 1 222 2233332 22344579999999998876532 223466666555555554 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.|||+. .++++|||...
T Consensus 121 Dlkp~Nil~~~~~~~kl~Dfg~~~ 144 (316)
T cd05620 121 DLKLDNVMLDRDGHIKIADFGMCK 144 (316)
T ss_pred CCCHHHeEECCCCCEEeCccCCCe
Confidence 9999999975 58999999754
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >TIGR00411 redox_disulf_1 small redox-active disulfide protein 1 | Back alignment and domain information |
|---|
Probab=98.88 E-value=6.6e-09 Score=98.32 Aligned_cols=80 Identities=19% Similarity=0.293 Sum_probs=69.9
Q ss_pred EEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHH
Q psy12972 876 HLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMV 955 (1578)
Q Consensus 876 ~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~ 955 (1578)
.+..||++||++|+.+.|.++++++.++.. +.+..||+++++++++++|+.+ +||+++ +|+. ...|..+.++|.
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~-vPt~~~--~g~~--~~~G~~~~~~l~ 75 (82)
T TIGR00411 2 KIELFTSPTCPYCPAAKRVVEEVAKEMGDA-VEVEYINVMENPQKAMEYGIMA-VPAIVI--NGDV--EFIGAPTKEELV 75 (82)
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhcCc-eEEEEEeCccCHHHHHHcCCcc-CCEEEE--CCEE--EEecCCCHHHHH
Confidence 367899999999999999999999998765 8999999999999999999998 999986 7753 345888899999
Q ss_pred HHHHhh
Q psy12972 956 EFFRLK 961 (1578)
Q Consensus 956 ~fi~~~ 961 (1578)
+++.+.
T Consensus 76 ~~l~~~ 81 (82)
T TIGR00411 76 EAIKKR 81 (82)
T ss_pred HHHHhh
Confidence 988764
|
This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin. |
| >KOG1165|consensus | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.5e-09 Score=118.59 Aligned_cols=132 Identities=17% Similarity=0.181 Sum_probs=101.2
Q ss_pred cccccccceEEEEEE-ecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAV-TKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~-l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-||.||||..+.|+ +-++++||||.-.-. .+.+.+ +.|.
T Consensus 34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-------------------------S~APQL--------------rdEY 74 (449)
T KOG1165|consen 34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-------------------------SEAPQL--------------RDEY 74 (449)
T ss_pred cccccCcceeeecccccccCceEEEEecccc-------------------------CCcchH--------------HHHH
Confidence 468999999999998 679999999964211 111112 3333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC-CCC-ceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD-KSS-TRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~-~~t-~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+-.+ .+.+ ..-||.||.- -|+ .++||||.+ |.+|.|+..++.+.++.+.|+...++++ ++.+|.+.+|-
T Consensus 75 r~YK----lL~g--~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIY 147 (449)
T KOG1165|consen 75 RTYK----LLGG--TEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIY 147 (449)
T ss_pred HHHH----HHcC--CCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceee
Confidence 3333 3332 2457888731 233 479999999 9999999999999999999999888888 78899999999
Q ss_pred cCCCCCCCCCCe--------eEEecCCchhh
Q psy12972 564 ADPHSGNDVNTW--------LYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~~--------v~liDfG~~~~ 586 (1578)
||+||.|+|+++ +++||||++-+
T Consensus 148 RDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 148 RDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred cccCccceeecCCCCCCCceEEEEeccchhh
Confidence 999999999873 89999998754
|
|
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.87 E-value=6.1e-09 Score=125.70 Aligned_cols=136 Identities=16% Similarity=0.176 Sum_probs=90.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+...... . ...-.+..|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--~--------------------------------~~~~~~~~e~ 52 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK--R--------------------------------NQIAHVRAER 52 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh--c--------------------------------cHHHHHHHHH
Confidence 56999999999999975 79999999986431100 0 0011234444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+..+. ++. +++++.. .....+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|++|
T Consensus 53 ~~l~~~~-----~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH 124 (350)
T cd05573 53 DILADAD-----SPW--IVKLYYSFQDEEHLYLVMEYMPGGDLMNLLI-RKDVFPEETARFYIAELVLALDSVHKLGFIH 124 (350)
T ss_pred HHHHhcC-----CCC--ccchhhheecCCeEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4444432 221 2222221 2344689999999999987643 224566666655555555 78999999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchhh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|++|.|||+. .++++|||....
T Consensus 125 ~Dlkp~NIll~~~~~~kL~Dfg~~~~ 150 (350)
T cd05573 125 RDIKPDNILIDADGHIKLADFGLCKK 150 (350)
T ss_pred cCCCHHHeEECCCCCEEeecCCCCcc
Confidence 99999999965 589999997643
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.87 E-value=6.4e-09 Score=126.44 Aligned_cols=138 Identities=14% Similarity=0.073 Sum_probs=90.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+....-.. . .+.. -.+.+|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~--------------------------~~~~------~~~~~E~ 52 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEML--E--------------------------KEQV------AHVRAER 52 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhh--h--------------------------hhHH------HHHHHHH
Confidence 67999999999999975 7999999998632100 0 0000 1223444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-..+ ......+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 53 ~il~~l~----h~~iv~~~~~~-~~~~~~~lv~E~~~~g~L~~~l~-~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~D 126 (364)
T cd05599 53 DILAEAD----NPWVVKLYYSF-QDENYLYLIMEYLPGGDMMTLLM-KKDTFTEEETRFYIAETILAIDSIHKLGYIHRD 126 (364)
T ss_pred HHHHhCC----CCCCcceEEEE-EcCCeEEEEECCCCCcHHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence 4444432 22222222222 22345689999999999987643 233456666655555555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|||+. .++++|||....
T Consensus 127 lkp~NIl~~~~~~~kl~Dfg~~~~ 150 (364)
T cd05599 127 IKPDNLLLDAKGHIKLSDFGLCTG 150 (364)
T ss_pred CCHHHeEECCCCCEEEeeccccee
Confidence 999999965 589999997543
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=8.1e-09 Score=123.98 Aligned_cols=137 Identities=15% Similarity=0.024 Sum_probs=90.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||+|++|.||+|+.+ +|+.||||+.+..-.. + . ...-++.+|+
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~---~---------------------------~~~~~~~~E~ 69 (329)
T PTZ00263 24 ETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL----K---M---------------------------KQVQHVAQEK 69 (329)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh----h---h---------------------------hhHHHHHHHH
Confidence 68999999999999976 7999999998642100 0 0 0001234565
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-..+. .....++||||++|..|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 70 ~~l~~l~----hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~d 143 (329)
T PTZ00263 70 SILMELS----HPFIVNMMCSFQ-DENRVYFLLEFVVGGELFTHLR-KAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRD 143 (329)
T ss_pred HHHHhCC----CCCCCcEEEEEE-cCCEEEEEEcCCCCChHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence 5555543 222233323332 2345689999999999877532 223345444444444443 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 144 lkp~NIll~~~~~~kl~Dfg~~~ 166 (329)
T PTZ00263 144 LKPENLLLDNKGHVKVTDFGFAK 166 (329)
T ss_pred CCHHHEEECCCCCEEEeeccCce
Confidence 999999975 58999999764
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=98.87 E-value=8.8e-09 Score=123.34 Aligned_cols=136 Identities=13% Similarity=0.065 Sum_probs=89.4
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|.||+|+.+ +|+.||+|+.+...... . .....+..|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~--------------------------------~~~~~~~~E~~ 47 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--K--------------------------------DEVAHTVTESR 47 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh--h--------------------------------HHHHHHHHHHH
Confidence 5899999999999964 79999999987532110 0 00012344555
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++. +...+.+-..+ ......+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|+
T Consensus 48 ~l~~l~----hp~i~~~~~~~-~~~~~~~lv~E~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dl 121 (323)
T cd05595 48 VLQNTR----HPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 121 (323)
T ss_pred HHHhCC----CCCCcceeeEE-ecCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence 554442 22222222222 22345689999999999866532 223456555555555554 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|.|||+. .++++|||...
T Consensus 122 kp~NIll~~~~~~kL~Dfg~~~ 143 (323)
T cd05595 122 KLENLMLDKDGHIKITDFGLCK 143 (323)
T ss_pred CHHHEEEcCCCCEEecccHHhc
Confidence 99999975 59999999653
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.2e-08 Score=122.50 Aligned_cols=136 Identities=17% Similarity=0.095 Sum_probs=89.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+...... ..+ . -.+..|.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~---------------------------~------~~~~~e~ 46 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD-DED---------------------------I------DWVQTEK 46 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------H------HHHHHHH
Confidence 35899999999999965 78999999987542110 000 0 0123444
Q ss_pred HHHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
..+.++. +++. |+.++. ......+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|
T Consensus 47 ~~~~~~~----~~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~l~~~~~~~~~~qi~~al~~lH~~~ivH 119 (327)
T cd05617 47 HVFEQAS----SNPF--LVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQ-RQRKLPEEHARFYAAEICIALNFLHERGIIY 119 (327)
T ss_pred HHHHhhc----CCCC--EeeEEEEEEeCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4443332 2332 233332 22345679999999999876532 234566666555555544 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|.|||+. .++++|||...
T Consensus 120 rDlkp~Nili~~~~~~kl~Dfg~~~ 144 (327)
T cd05617 120 RDLKLDNVLLDADGHIKLTDYGMCK 144 (327)
T ss_pred cCCCHHHEEEeCCCCEEEeccccce
Confidence 99999999964 59999999653
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.3e-08 Score=121.31 Aligned_cols=134 Identities=16% Similarity=0.112 Sum_probs=88.8
Q ss_pred cccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 411 lasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
||.|++|.||+|+.. +|+.||||+........ . .....+..|...
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~-~---------------------------------~~~~~~~~E~~~ 46 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVS-R---------------------------------SEVTHTLAERTV 46 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-h---------------------------------hHHHHHHHHHHH
Confidence 689999999999975 68999999876321100 0 001123445555
Q ss_pred HHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 490 AERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 490 ~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
+.++. ++. +.+-..+ ......+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|+
T Consensus 47 l~~l~-----h~~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDl 119 (312)
T cd05585 47 LAQVN-----CPFIVPLKFSF-QSPEKLYLVLAFINGGELFHHLQ-REGRFDLSRARFYTAELLCALENLHKFNVIYRDL 119 (312)
T ss_pred HHhCC-----CCcEeceeeEE-ecCCeEEEEEcCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCC
Confidence 55442 232 2222222 22345689999999999977643 233466666655555544 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|.|||+. .++++|||...
T Consensus 120 kp~Nili~~~~~~kl~Dfg~~~ 141 (312)
T cd05585 120 KPENILLDYQGHIALCDFGLCK 141 (312)
T ss_pred CHHHeEECCCCcEEEEECcccc
Confidence 99999964 59999999753
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.2e-08 Score=122.73 Aligned_cols=139 Identities=13% Similarity=0.075 Sum_probs=88.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+....-... . .....+..|.
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~-~---------------------------------~~~~~~~~e~ 52 (331)
T cd05624 7 KVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLK-R---------------------------------AETACFREER 52 (331)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHh-h---------------------------------HHHHHHHHHH
Confidence 57999999999999965 78999999875311000 0 0001123333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+... +++.+....-+..-....+|||||++|..|.++..-....++...+...+.+++ ++.+|..|++|+|
T Consensus 53 ~~l~~~-----~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrD 127 (331)
T cd05624 53 NVLVNG-----DCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRD 127 (331)
T ss_pred HHHHhC-----CCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence 322222 223222111111223446799999999999887543234556555544444444 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 128 lkp~Nill~~~~~~kl~DfG~a~~ 151 (331)
T cd05624 128 IKPDNVLLDMNGHIRLADFGSCLK 151 (331)
T ss_pred CchHHEEEcCCCCEEEEeccceee
Confidence 999999975 589999997543
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=98.86 E-value=1e-08 Score=122.88 Aligned_cols=136 Identities=14% Similarity=0.057 Sum_probs=89.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|..+ +|+.||||+.+...... ..+ .-.+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~---------------------------------~~~~~~e~ 51 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDD---------------------------------VECTMVEK 51 (323)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------------HHHHHHHH
Confidence 67999999999999865 79999999986432100 000 01123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+... .+.+. ++.++. ......+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|
T Consensus 52 ~~l~~~----~~~~~--i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~-~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH 124 (323)
T cd05615 52 RVLALQ----DKPPF--LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ-QVGKFKEPQAVFYAAEISVGLFFLHRRGIIY 124 (323)
T ss_pred HHHHhc----cCCCc--hhheeeEEecCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 433322 22332 222221 12234579999999999876532 223466666666555555 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|+|||+. .++++|||...
T Consensus 125 rDikp~Nill~~~~~ikL~Dfg~~~ 149 (323)
T cd05615 125 RDLKLDNVMLDSEGHIKIADFGMCK 149 (323)
T ss_pred cCCCHHHeEECCCCCEEEecccccc
Confidence 99999999965 58999999754
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.2e-08 Score=122.09 Aligned_cols=137 Identities=14% Similarity=0.064 Sum_probs=88.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+...... ..+ ...+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~---------------------------------~~~~~~e~ 51 (323)
T cd05616 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDD---------------------------------VECTMVEK 51 (323)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------------HHHHHHHH
Confidence 56999999999999865 68899999987542110 000 00112233
Q ss_pred HHHHHHHHhhCCCCCee-ecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVY-IPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~-vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+... .+++.+. +-..+ ......+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+
T Consensus 52 ~~l~~~----~~~~~i~~~~~~~-~~~~~~~lv~E~~~~g~L~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 125 (323)
T cd05616 52 RVLALS----GKPPFLTQLHSCF-QTMDRLYFVMEYVNGGDLMYQIQ-QVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYR 125 (323)
T ss_pred HHHHhc----cCCCeEeeEEEEE-ecCCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEec
Confidence 333222 2333322 21222 22234579999999999876532 223466666665555555 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.|||+. .++++|||...
T Consensus 126 Dlkp~Nill~~~~~~kL~DfG~~~ 149 (323)
T cd05616 126 DLKLDNVMLDSEGHIKIADFGMCK 149 (323)
T ss_pred CCCHHHeEECCCCcEEEccCCCce
Confidence 9999999975 58999999653
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=98.86 E-value=6.3e-09 Score=125.46 Aligned_cols=136 Identities=17% Similarity=0.177 Sum_probs=88.3
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|+||+|.. .+|+.||||+.......... .-.+.+|.
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------------------------~~~~~~E~ 65 (343)
T cd07878 21 TPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIH-----------------------------------ARRTYREL 65 (343)
T ss_pred eecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHH-----------------------------------HHHHHHHH
Confidence 6899999999999986 47899999987643211100 00122344
Q ss_pred HHHHHHHHhhCCCCCeeecEEe-----eCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRIL-----WDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~-----~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.+.++. +...+.+..++ .+.....+++||+. |..+.++. ....++...+...+.+++ +..+|..|
T Consensus 66 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 138 (343)
T cd07878 66 RLLKHMK----HENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIV--KCQKLSDEHVQFLIYQLLRGLKYIHSAG 138 (343)
T ss_pred HHHHhcC----CCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4444432 11112222111 11223457999998 66776653 344577776666665555 77899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|+|||+. .++++|||....
T Consensus 139 ivHrdikp~Nil~~~~~~~kl~Dfg~~~~ 167 (343)
T cd07878 139 IIHRDLKPSNVAVNEDCELRILDFGLARQ 167 (343)
T ss_pred eecccCChhhEEECCCCCEEEcCCcccee
Confidence 99999999999965 599999997643
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.2e-08 Score=117.81 Aligned_cols=134 Identities=15% Similarity=0.143 Sum_probs=93.7
Q ss_pred cccccceEEEEEEec---CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 411 IAAASLAQVFRAVTK---EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 411 lasaSiaQVhrA~l~---~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
||.|++|.||+|+.+ +|..||||+..+...... .-+|.+|+
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~------------------------------------~~~~~~E~ 46 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSV------------------------------------RDEMMREA 46 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHH------------------------------------HHHHHHHH
Confidence 899999999999864 466799998865432110 01245566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+-++++ .+...+.+..+.. ....++||||++|.+|.+........++...+...+.++. +..+|..|++|+|
T Consensus 47 ~~l~~l----~h~~ii~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 120 (257)
T cd05115 47 EIMHQL----DNPYIVRMIGVCE--AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRD 120 (257)
T ss_pred HHHHhc----CCCCeEEEEEEEc--CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecc
Confidence 656554 2333344444432 2456899999999999887543344567777766666655 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+||++. .++++|||....
T Consensus 121 lkp~nil~~~~~~~kl~dfg~~~~ 144 (257)
T cd05115 121 LAARNVLLVNQHYAKISDFGLSKA 144 (257)
T ss_pred cchheEEEcCCCcEEeccCCcccc
Confidence 999999965 488999997643
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >KOG0550|consensus | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.2e-09 Score=124.76 Aligned_cols=72 Identities=40% Similarity=0.587 Sum_probs=65.3
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC--hhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--PTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
-+...|+|.|||+++.++..|||+|||++++.||||++.. .+++.+|+++.+||.+|+||.+|..||..-..
T Consensus 369 kSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg~dl 442 (486)
T KOG0550|consen 369 KSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSGQDL 442 (486)
T ss_pred HhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccccch
Confidence 3456899999999999999999999999999999999874 57888999999999999999999999986554
|
|
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.2e-08 Score=122.37 Aligned_cols=137 Identities=18% Similarity=0.136 Sum_probs=89.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+...... .+ .+-.+..|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----------------------------~~------~~~~~~~e~ 52 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA----------------------------QE------TVSFFEEER 52 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh----------------------------hh------HHHHHHHHH
Confidence 57999999999999965 79999999986432100 00 001123344
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..+.+. +++. +.+-..+. .....+|||||++|..|.++..-....++...+...+.+++ ++.+|..|++|+
T Consensus 53 ~i~~~~-----~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~ 126 (330)
T cd05601 53 DILSIS-----NSPWIPQLQYAFQ-DKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHR 126 (330)
T ss_pred HHHHhC-----CCCCCcceeeEEe-cCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcc
Confidence 333332 2222 22222222 23456899999999999887543324566655555554444 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.|||+. .++++|||...
T Consensus 127 Dlkp~NIll~~~~~~kL~Dfg~a~ 150 (330)
T cd05601 127 DIKPENVLIDRTGHIKLADFGSAA 150 (330)
T ss_pred cCchHheEECCCCCEEeccCCCCe
Confidence 9999999965 58999999764
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.4e-08 Score=119.13 Aligned_cols=139 Identities=16% Similarity=0.064 Sum_probs=93.4
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|.. .+|+.||||+........ ...+..+.+|.
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----------------------------------~~~~~~~~~E~ 51 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK----------------------------------RKGEAMALNEK 51 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhh----------------------------------hhhHHHHHHHH
Confidence 5799999999999996 589999999875432110 00112344566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +...+.+...+. ....-++||||++|.+|.+..... ..+++...+...+.+++ +..+|..|++|+
T Consensus 52 ~il~~l~----~~~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~ 126 (285)
T cd05631 52 RILEKVN----SRFVVSLAYAYE-TKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYR 126 (285)
T ss_pred HHHHhcC----CCcEEEEEEEEc-cCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeC
Confidence 6666553 222233333332 234567999999999997653221 23466666655555554 778999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.|||+. .++++|||....
T Consensus 127 dikp~Nill~~~~~~kl~Dfg~~~~ 151 (285)
T cd05631 127 DLKPENILLDDRGHIRISDLGLAVQ 151 (285)
T ss_pred CCCHHHEEECCCCCEEEeeCCCcEE
Confidence 9999999975 589999997643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.6e-08 Score=110.51 Aligned_cols=132 Identities=19% Similarity=0.183 Sum_probs=93.7
Q ss_pred cccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 411 lasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
|++|+.|+||+++.. +|++++||+.++..... .+-.+.+|.+.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~------------------------------------~~~~~~~e~~~ 44 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS------------------------------------LLEELLREIEI 44 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh------------------------------------HHHHHHHHHHH
Confidence 689999999999976 49999999987664321 11234566666
Q ss_pred HHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 490 AERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 490 ~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
++++.. ..+|+++... .+..+++|||++|.+|.++.......++...+...+.+++ +..+|..|++|+|
T Consensus 45 ~~~l~~-------~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~d 117 (215)
T cd00180 45 LKKLNH-------PNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRD 117 (215)
T ss_pred HHhcCC-------CCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence 666543 3445554333 3478899999999999887432212566666555555544 6889999999999
Q ss_pred CCCCCCCCC----eeEEecCCchh
Q psy12972 566 PHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~----~v~liDfG~~~ 585 (1578)
++|+||++. .++++|||...
T Consensus 118 l~~~ni~~~~~~~~~~l~d~~~~~ 141 (215)
T cd00180 118 LKPENILLDSDNGKVKLADFGLSK 141 (215)
T ss_pred CCHhhEEEeCCCCcEEEecCCceE
Confidence 999999954 37888888653
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >cd03003 PDI_a_ERdj5_N PDIa family, N-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains | Back alignment and domain information |
|---|
Probab=98.85 E-value=6.8e-10 Score=109.74 Aligned_cols=78 Identities=19% Similarity=0.381 Sum_probs=57.3
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeecc-cCccccccCCccccccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYDL-FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~~-~~~~~~i~g~~~~~~~~ 825 (1578)
..++..+|+..+. ..++|+|.||||||+||+++.|.|+++|+.+++. .++.++|..+. +|+..++.
T Consensus 4 ~~l~~~~f~~~v~---~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~vd~~~~~~~~~~~~v~--------- 71 (101)
T cd03003 4 VTLDRGDFDAAVN---SGEIWFVNFYSPRCSHCHDLAPTWREFAKEMDGVIRIGAVNCGDDRMLCRSQGVN--------- 71 (101)
T ss_pred EEcCHhhHHHHhc---CCCeEEEEEECCCChHHHHhHHHHHHHHHHhcCceEEEEEeCCccHHHHHHcCCC---------
Confidence 3456778888773 3489999999999999999999999999999865 44555554322 44444444
Q ss_pred cccccCcccccccccc
Q psy12972 826 HNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~~ 841 (1578)
.+||+.+|+.|.
T Consensus 72 ----~~Pt~~~~~~g~ 83 (101)
T cd03003 72 ----SYPSLYVFPSGM 83 (101)
T ss_pred ----ccCEEEEEcCCC
Confidence 449988888664
|
This subfamily is comprised of the first TRX domain of ERdj5 located after the DnaJ domain at the N-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation. |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.2e-08 Score=122.43 Aligned_cols=137 Identities=16% Similarity=0.090 Sum_probs=88.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+......... .+ .. .+..|.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~---------------------------~~------~~~~E~ 46 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDD-ED---------------------------ID------WVQTEK 46 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcch-hH---------------------------HH------HHHHHH
Confidence 36899999999999965 789999999865321100 00 00 112333
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..+.+. .+++. +.+-..+ ...+..+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|+
T Consensus 47 ~~l~~~----~~hp~iv~~~~~~-~~~~~~~lv~E~~~~~~L~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~ 120 (329)
T cd05618 47 HVFEQA----SNHPFLVGLHSCF-QTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISLALNYLHERGIIYR 120 (329)
T ss_pred HHHHhc----CCCCcCCceeeEE-EeCCEEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeC
Confidence 322222 12332 2222222 22356789999999998876532 234566665555555544 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.|||+. .++++|||...
T Consensus 121 Dikp~Nili~~~~~~kL~DfG~~~ 144 (329)
T cd05618 121 DLKLDNVLLDSEGHIKLTDYGMCK 144 (329)
T ss_pred CCCHHHEEECCCCCEEEeeCCccc
Confidence 9999999975 59999999753
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.4e-08 Score=121.92 Aligned_cols=136 Identities=17% Similarity=0.086 Sum_probs=89.1
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|.||+|+.+ +|+.||||+.+...... ..+ .+ .+..|..
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~-~~~---------------------------~~------~~~~e~~ 47 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVND-DED---------------------------ID------WVQTEKH 47 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------HH------HHHHHHH
Confidence 5899999999999965 78999999987532110 000 00 1223333
Q ss_pred HHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++ .+++. +.+-..+ ......+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 48 il~~~----~~hp~Iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~d 121 (329)
T cd05588 48 VFETA----SNHPFLVGLHSCF-QTESRLFFVIEFVSGGDLMFHMQ-RQRKLPEEHARFYSAEISLALNFLHERGIIYRD 121 (329)
T ss_pred HHHhc----cCCCCCCceEEEE-EcCCEEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 33332 22332 2222222 22345689999999999876532 234566666655555555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 122 lkp~Nili~~~~~~kL~Dfg~~~ 144 (329)
T cd05588 122 LKLDNVLLDAEGHIKLTDYGMCK 144 (329)
T ss_pred CCHHHeEECCCCCEEECcCcccc
Confidence 999999975 58999999653
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.85 E-value=9e-09 Score=121.24 Aligned_cols=136 Identities=21% Similarity=0.202 Sum_probs=89.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+....-... ....-.+.+|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----------------------------------~~~~~~~~~E~ 52 (291)
T cd05612 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIR----------------------------------LKQEQHVHNEK 52 (291)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh----------------------------------hHHHHHHHHHH
Confidence 67999999999999975 79999999875321000 00011234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
..+.++. + +. |.+++... ....+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|
T Consensus 53 ~~l~~l~----h-p~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 124 (291)
T cd05612 53 RVLKEVS----H-PF--IIRLFWTEHDQRFLYMLMEYVPGGELFSYLR-NSGRFSNSTGLFYASEIVCALEYLHSKEIVY 124 (291)
T ss_pred HHHHhCC----C-Cc--HhhhHhhhccCCeEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 4444432 1 21 22222211 234579999999999987643 223455555555555544 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchhh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|++|.|||+. .++++|||....
T Consensus 125 ~dlkp~NIli~~~~~~kl~Dfg~~~~ 150 (291)
T cd05612 125 RDLKPENILLDKEGHIKLTDFGFAKK 150 (291)
T ss_pred cCCCHHHeEECCCCCEEEEecCcchh
Confidence 99999999965 599999997643
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=98.85 E-value=7.8e-09 Score=121.96 Aligned_cols=148 Identities=18% Similarity=0.138 Sum_probs=96.4
Q ss_pred HhCCChhhhccccCC-------cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCC
Q psy12972 394 DFGCTHSQLFRSFDE-------NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFD 465 (1578)
Q Consensus 394 ~lG~~~~~iF~~fd~-------~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~ 465 (1578)
++|.+.+-++...++ ..||.|++|+||+|+.. +|+.||||+..-...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~------------------------- 58 (292)
T cd06657 4 QFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQ------------------------- 58 (292)
T ss_pred HhhhhceEeecCCChHHHhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccch-------------------------
Confidence 344444444444444 45999999999999875 899999997532110
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHH
Q psy12972 466 FQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVD 545 (1578)
Q Consensus 466 ~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~ 545 (1578)
..+-.+.+|...+.++. +..-+.....+.. ....++||||++|.++.++. .....+...+.
T Consensus 59 ------------~~~~~~~~e~~~l~~l~----h~~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~ 119 (292)
T cd06657 59 ------------QRRELLFNEVVIMRDYQ----HENVVEMYNSYLV-GDELWVVMEFLEGGALTDIV--THTRMNEEQIA 119 (292)
T ss_pred ------------hHHHHHHHHHHHHHhcC----CcchhheeeEEEe-CCEEEEEEecCCCCcHHHHH--hcCCCCHHHHH
Confidence 01112344544444432 2222333333322 34578999999999998763 33455666665
Q ss_pred HHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 546 RKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 546 ~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
..+.+++ ++.+|..|++|+|++|.||+++ .++++|||...
T Consensus 120 ~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~ 164 (292)
T cd06657 120 AVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 164 (292)
T ss_pred HHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccce
Confidence 5555555 7889999999999999999975 58999999654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >KOG0720|consensus | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.4e-09 Score=125.83 Aligned_cols=69 Identities=39% Similarity=0.669 Sum_probs=65.7
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
..|+|.+|||+.++|.++|||.||++|...|||||..+.|++.|+.++.||++|+|+++|+.||.....
T Consensus 234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~~k 302 (490)
T KOG0720|consen 234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRKEYDLELKK 302 (490)
T ss_pred CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhhHHHHHHHH
Confidence 689999999999999999999999999999999999999999999999999999999999999975443
|
|
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.3e-08 Score=124.67 Aligned_cols=136 Identities=13% Similarity=0.023 Sum_probs=87.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+..-.. . .+ ..-.+..|.
T Consensus 7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-------~---------------------~~------~~~~~~~E~ 52 (382)
T cd05625 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVL-------L---------------------RN------QVAHVKAER 52 (382)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhh-------h---------------------HH------HHHHHHHHH
Confidence 57999999999999964 7899999987532100 0 00 011234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-..+. -....+|||||++|..|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 53 ~il~~~~----h~~iv~~~~~~~-~~~~~~lv~E~~~gg~L~~~l~-~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrD 126 (382)
T cd05625 53 DILAEAD----NEWVVRLYYSFQ-DKDNLYFVMDYIPGGDMMSLLI-RMGIFPEDLARFYIAELTCAVESVHKMGFIHRD 126 (382)
T ss_pred HHHHhCC----CCcCCeEEEEEE-eCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 5444432 222222222222 1234689999999998877632 222344444433444443 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCch
Q psy12972 566 PHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~ 584 (1578)
+||.|||+. .++++|||..
T Consensus 127 lKp~NILl~~~g~~kL~DFGla 148 (382)
T cd05625 127 IKPDNILIDRDGHIKLTDFGLC 148 (382)
T ss_pred CCHHHEEECCCCCEEEeECCCC
Confidence 999999964 5899999975
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=98.85 E-value=8.8e-09 Score=121.91 Aligned_cols=135 Identities=21% Similarity=0.224 Sum_probs=90.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+...... ....+.+|+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~~~~E~ 54 (303)
T cd07869 11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG------------------------------------TPFTAIREA 54 (303)
T ss_pred eeEEecCCEEEEEEEECCCCCEEEEEEeccccccc------------------------------------cchhHHHHH
Confidence 67999999999999976 79999999875321100 001223455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+..++.+ ....++||||++|. +.+.......+++.+.+...+.+++ +..+|..|++|+|
T Consensus 55 ~~l~~l----~h~niv~~~~~~~~-~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d 128 (303)
T cd07869 55 SLLKGL----KHANIVLLHDIIHT-KETLTLVFEYVHTD-LCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRD 128 (303)
T ss_pred HHHhhC----CCCCcCeEEEEEec-CCeEEEEEECCCcC-HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 555444 23333444444432 34568999999763 3333222224567777666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 129 lkp~Nill~~~~~~kl~Dfg~~~ 151 (303)
T cd07869 129 LKPQNLLISDTGELKLADFGLAR 151 (303)
T ss_pred CCHHHEEECCCCCEEECCCCcce
Confidence 999999965 58999999753
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.5e-08 Score=121.40 Aligned_cols=138 Identities=17% Similarity=0.082 Sum_probs=89.3
Q ss_pred cccccccceEEEEEEe----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVT----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+. .+|+.||||+.+...... + ......+.
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~---~------------------------------~~~~~~~~ 48 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVR---N------------------------------QKDTAHTK 48 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHh---h------------------------------hhhHHHHH
Confidence 4689999999999985 368999999986421100 0 00112345
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
.|.+.++++. +...+.+-..+. .....+|||||++|.+|.+... ....+....+...+.+++ +..+|..|++
T Consensus 49 ~E~~il~~l~----hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 122 (323)
T cd05584 49 AERNILEAVK----HPFIVDLIYAFQ-TGGKLYLILEYLSGGELFMHLE-REGIFMEDTACFYLSEISLALEHLHQQGII 122 (323)
T ss_pred HHHHHHHhCC----CCchhceeeEEe-cCCeEEEEEeCCCCchHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5666665553 222222222222 2345689999999999977532 222344444444444444 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.|||+. .++++|||...
T Consensus 123 H~dlkp~Nil~~~~~~~kl~Dfg~~~ 148 (323)
T cd05584 123 YRDLKPENILLDAQGHVKLTDFGLCK 148 (323)
T ss_pred cCCCCHHHeEECCCCCEEEeeCcCCe
Confidence 999999999975 59999999753
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=98.84 E-value=2e-08 Score=117.58 Aligned_cols=136 Identities=13% Similarity=0.068 Sum_probs=89.6
Q ss_pred cccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 411 lasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
||.|++|.||+|..+ +|+.||||+......... ...-.+..|.+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~----------------------------------~~~~~~~~E~~i 46 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKR----------------------------------KGYEGAMVEKRI 46 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhh----------------------------------HHHHHHHHHHHH
Confidence 689999999999865 899999998753211000 000123456665
Q ss_pred HHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhH---hhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 490 AERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGL---LEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 490 ~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l---~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.++. ++. +.+-..+ ......+|||||++|.+|.+.... ....++...+...+.+++ +..+|..|++|
T Consensus 47 l~~l~-----~~~i~~~~~~~-~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H 120 (280)
T cd05608 47 LAKVH-----SRFIVSLAYAF-QTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIY 120 (280)
T ss_pred HHhCC-----CCcEeeeeEEE-cCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 55542 232 2222222 223456899999999999765321 123456666655555555 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchhh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|++|.||++. .++++|||....
T Consensus 121 ~dlkp~Nili~~~~~~~l~dfg~~~~ 146 (280)
T cd05608 121 RDLKPENVLLDNDGNVRISDLGLAVE 146 (280)
T ss_pred CCCCHHHEEECCCCCEEEeeCcccee
Confidence 99999999975 489999997643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >PTZ00062 glutaredoxin; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.9e-08 Score=111.34 Aligned_cols=92 Identities=13% Similarity=0.074 Sum_probs=77.3
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
+.+.|.+.+. +..+..+++|+|+||++|+.+.|.+.++++++.. +.|+.||++ |+|.+ +||+++|++
T Consensus 5 ~~ee~~~~i~--~~~g~~vl~f~a~w~~~C~~m~~vl~~l~~~~~~--~~F~~V~~d--------~~V~~-vPtfv~~~~ 71 (204)
T PTZ00062 5 KKEEKDKLIE--SNTGKLVLYVKSSKEPEYEQLMDVCNALVEDFPS--LEFYVVNLA--------DANNE-YGVFEFYQN 71 (204)
T ss_pred CHHHHHHHHh--cCCCcEEEEEeCCCCcchHHHHHHHHHHHHHCCC--cEEEEEccc--------cCccc-ceEEEEEEC
Confidence 3445555552 2247889999999999999999999999999864 899999986 99998 999999999
Q ss_pred CccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 939 GRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 939 G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
|+.+....| .++..|.+++.+....
T Consensus 72 g~~i~r~~G-~~~~~~~~~~~~~~~~ 96 (204)
T PTZ00062 72 SQLINSLEG-CNTSTLVSFIRGWAQK 96 (204)
T ss_pred CEEEeeeeC-CCHHHHHHHHHHHcCC
Confidence 998887766 5789999999988754
|
|
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.4e-08 Score=119.87 Aligned_cols=136 Identities=20% Similarity=0.179 Sum_probs=85.9
Q ss_pred cccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 411 lasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
||.|++|.||+|+.+ +|+.||||+...... ... .+. ..+..|...
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~---~~~------------------------~~~-------~~~~~e~~~ 46 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEI---VAK------------------------KEV-------AHTIGERNI 46 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHH---hhh------------------------hHH-------HHHHHHHHH
Confidence 689999999999965 799999999742110 000 000 001112222
Q ss_pred HHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 490 AERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 490 ~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.. +.+++. ++.++. +..+..+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 47 l~~~~--~~~~p~--i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrD 121 (330)
T cd05586 47 LVRTL--LDESPF--IVGLKFSFQTDSDLYLVTDYMSGGELFWHLQ-KEGRFSEDRAKFYIAELVLALEHLHKYDIVYRD 121 (330)
T ss_pred HHHhc--cCCCCc--CcceEEEEecCCeEEEEEcCCCCChHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence 22111 112332 233322 22345689999999999876532 234466666666555555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 122 lkp~Nili~~~~~~kl~Dfg~a~ 144 (330)
T cd05586 122 LKPENILLDATGHIALCDFGLSK 144 (330)
T ss_pred CCHHHeEECCCCCEEEecCCcCc
Confidence 999999965 58999999753
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.1e-08 Score=122.76 Aligned_cols=135 Identities=18% Similarity=0.163 Sum_probs=88.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+....-. ...+ .. -.+.+|.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~--------------------------~~------~~~~~E~ 52 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEM--FKKD--------------------------QL------AHVKAER 52 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHH--HHhH--------------------------HH------HHHHHHH
Confidence 67999999999999864 899999998753210 0000 00 1134455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+.++. ++. |++++.. -....+|||||++|.+|.+... ....++...+...+.+++ ++.+|..|++|
T Consensus 53 ~il~~l~-----hp~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~ql~~aL~~LH~~givH 124 (377)
T cd05629 53 DVLAESD-----SPW--VVSLYYSFQDAQYLYLIMEFLPGGDLMTMLI-KYDTFSEDVTRFYMAECVLAIEAVHKLGFIH 124 (377)
T ss_pred HHHHhCC-----CCC--cceEEEEEEcCCeeEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 5444432 222 3333322 2345689999999999987642 223455554444444444 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|.|||++ .++++|||...
T Consensus 125 rDlkp~NIll~~~~~~kl~DfGla~ 149 (377)
T cd05629 125 RDIKPDNILIDRGGHIKLSDFGLST 149 (377)
T ss_pred cCCCHHHEEECCCCCEEEeeccccc
Confidence 99999999964 58888998653
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.1e-08 Score=130.85 Aligned_cols=137 Identities=18% Similarity=0.204 Sum_probs=93.7
Q ss_pred cCCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 406 FDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 406 fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
...+.||.|++|.||+|.. .++.+++|+..+.....- + +... ...-.+.+
T Consensus 336 ~~~~~iG~G~~g~Vy~~~~-~~~~~v~k~~~~~~~~~~--~--------------------------~~~~-~~~~~~~~ 385 (535)
T PRK09605 336 IPDHLIGKGAEADIKKGEY-LGRDAVIKERVPKGYRHP--E--------------------------LDER-LRTERTRA 385 (535)
T ss_pred CccceeccCCcEEEEEEee-cCccceeEEEecccccch--h--------------------------HHHH-HHHHHHHH
Confidence 3457899999999999986 455677776543211100 0 0000 11124678
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccC
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHAD 565 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~D 565 (1578)
|++.+.+++. +.+.+|.++.......+|||||++|.+|.+... ....++..+.+. +..+|..|++|+|
T Consensus 386 E~~~l~~l~~-----~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~------~~~~~~~~i~~~-L~~lH~~giiHrD 453 (535)
T PRK09605 386 EARLLSEARR-----AGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE------GNPELVRKVGEI-VAKLHKAGIVHGD 453 (535)
T ss_pred HHHHHHhhcc-----cCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH------HHHHHHHHHHHH-HHHHHhCCCccCC
Confidence 8888888753 456677777655567899999999999987642 123455555543 6789999999999
Q ss_pred CCCCCCCCC--eeEEecCCch
Q psy12972 566 PHSGNDVNT--WLYPVDLGDK 584 (1578)
Q Consensus 566 pHPGNilv~--~v~liDfG~~ 584 (1578)
+||+|||+. .++++|||..
T Consensus 454 lkp~NILl~~~~~~liDFGla 474 (535)
T PRK09605 454 LTTSNFIVRDDRLYLIDFGLG 474 (535)
T ss_pred CChHHEEEECCcEEEEeCccc
Confidence 999999963 4777777754
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.6e-08 Score=118.89 Aligned_cols=135 Identities=18% Similarity=0.166 Sum_probs=86.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+....... ...+.+|.
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~E~ 54 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGA------------------------------------PCTAIREV 54 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEecccccCCc------------------------------------chhHHHHH
Confidence 57999999999999965 789999998753211000 01123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+-.++. ....-++||||++| .+.+........++...+...+.++. +..+|..|++|+|
T Consensus 55 ~~l~~l~----h~niv~~~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~d 128 (288)
T cd07871 55 SLLKNLK----HANIVTLHDIIH-TERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRD 128 (288)
T ss_pred HHHHhCC----CCCEeeEEEEEc-CCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 5554442 222233222321 22335799999987 66554322222345555554444444 6789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 129 lkp~Nil~~~~~~~kl~DfG~~~ 151 (288)
T cd07871 129 LKPQNLLINEKGELKLADFGLAR 151 (288)
T ss_pred CCHHHEEECCCCCEEECcCccee
Confidence 999999975 59999999764
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.1e-08 Score=119.11 Aligned_cols=143 Identities=16% Similarity=0.145 Sum_probs=93.0
Q ss_pred hhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHH
Q psy12972 400 SQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLE 478 (1578)
Q Consensus 400 ~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 478 (1578)
.+.|..+ +.||+|++|.||+|... +|+.||||+.........
T Consensus 3 ~~~y~~~--~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~----------------------------------- 45 (277)
T cd06642 3 EELFTKL--ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDE----------------------------------- 45 (277)
T ss_pred HHHHHHH--HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHH-----------------------------------
Confidence 3445544 56999999999999865 689999998753221100
Q ss_pred HHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHH
Q psy12972 479 QELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQI 556 (1578)
Q Consensus 479 ~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i 556 (1578)
.-++.+|++.+.++. +..-+.+...+ ......+|||||++|.++.+.. ....++...+...+.++. +..+
T Consensus 46 -~~~~~~e~~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~~i~~~l~~l 117 (277)
T cd06642 46 -IEDIQQEITVLSQCD----SPYITRYYGSY-LKGTKLWIIMEYLGGGSALDLL--KPGPLEETYIATILREILKGLDYL 117 (277)
T ss_pred -HHHHHHHHHHHHcCC----CCccHhhhccc-ccCCceEEEEEccCCCcHHHHh--hcCCCCHHHHHHHHHHHHHHHHHH
Confidence 013455555555442 11111111122 1234568999999999987763 344556565555555544 6788
Q ss_pred HHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 557 FQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 557 ~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|..|++|+|++|.||++. .+++.|||....+
T Consensus 118 H~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~ 151 (277)
T cd06642 118 HSERKIHRDIKAANVLLSEQGDVKLADFGVAGQL 151 (277)
T ss_pred hcCCeeccCCChheEEEeCCCCEEEccccccccc
Confidence 999999999999999965 4899999976443
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.9e-08 Score=119.17 Aligned_cols=134 Identities=16% Similarity=0.131 Sum_probs=89.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.|+.|++|.||+|+.. +|+.||||+..+..... . . ..-++..|.
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~-~--------------------------~-------~~~~~~~e~ 52 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL-R--------------------------N-------QIQQVFVER 52 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh-H--------------------------H-------HHHHHHHHH
Confidence 67999999999999975 68999999875432100 0 0 001234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCce--EEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTR--VLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~--VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+.++. ++ .|++++..++++. +|||||++|.+|.++..- ...++...+...+.+++ +..+|..|++|
T Consensus 53 ~~l~~~~-----~~--~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 124 (305)
T cd05609 53 DILTFAE-----NP--FVVSMFCSFETKRHLCMVMEYVEGGDCATLLKN-IGALPVDMARMYFAETVLALEYLHNYGIVH 124 (305)
T ss_pred HHHHhCC-----CC--CeeeeEEEEecCCEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 4444332 22 3455665444444 899999999999877431 22344444444444443 68899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCch
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~ 584 (1578)
+|+||+||+++ .++++|||..
T Consensus 125 ~dl~p~NIll~~~~~~~l~dfg~~ 148 (305)
T cd05609 125 RDLKPDNLLITSMGHIKLTDFGLS 148 (305)
T ss_pred cCCchHHEEECCCCCEEEeeCCCc
Confidence 99999999976 5899999965
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.7e-08 Score=120.91 Aligned_cols=139 Identities=16% Similarity=0.067 Sum_probs=90.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|... +|+.||||+.++..... .+ + . -.+..|.
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--~~-------------------------~-~------~~l~~e~ 50 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA--RD-------------------------E-V------ESLMCEK 50 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh--hh-------------------------H-H------HHHHHHH
Confidence 56899999999999865 79999999987542100 00 0 0 0122233
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+-++.++ .+.+...+.+-..+ ......+|||||++|..|... +....++...+...+.+++ +..+|..|++|+|
T Consensus 51 ~~~~~~~-~l~hp~i~~~~~~~-~~~~~~~lv~E~~~~~~L~~~--~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrd 126 (324)
T cd05589 51 RIFETAN-SERHPFLVNLFACF-QTEDHVCFVMEYAAGGDLMMH--IHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRD 126 (324)
T ss_pred HHHHhcc-ccCCCChhceeeEE-EcCCEEEEEEcCCCCCcHHHH--hhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecC
Confidence 3332222 12222223333333 223456899999999988654 3344567666666555555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 127 lkp~Nill~~~~~~kL~Dfg~~~ 149 (324)
T cd05589 127 LKLDNLLLDTEGFVKIADFGLCK 149 (324)
T ss_pred CCHHHeEECCCCcEEeCcccCCc
Confidence 999999975 59999999653
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.1e-08 Score=122.65 Aligned_cols=137 Identities=14% Similarity=0.078 Sum_probs=90.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+....-... . ...-.+..|.
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~---------------------------------~~~~~~~~e~ 94 (370)
T cd05596 49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIK-R---------------------------------SDSAFFWEER 94 (370)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-h---------------------------------hhHHHHHHHH
Confidence 67999999999999975 79999999985321000 0 0001133444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+..+. +...+.+...+ ......+|||||++|.+|.++. ....++...+...+.+++ +..+|..|++|+|
T Consensus 95 ~il~~~~----h~~iv~~~~~~-~~~~~~~lv~Ey~~gg~L~~~l--~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD 167 (370)
T cd05596 95 DIMAHAN----SEWIVQLHYAF-QDDKYLYMVMEYMPGGDLVNLM--SNYDIPEKWARFYTAEVVLALDAIHSMGFIHRD 167 (370)
T ss_pred HHHHhCC----CCCcceEEEEE-ecCCEEEEEEcCCCCCcHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 4443332 22223333332 2234468999999999998763 444566655555444444 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 168 Lkp~NILl~~~~~~kL~DfG~~~~ 191 (370)
T cd05596 168 VKPDNMLLDKSGHLKLADFGTCMK 191 (370)
T ss_pred CCHHHEEEcCCCCEEEEeccceee
Confidence 999999975 599999997643
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.3e-09 Score=109.82 Aligned_cols=80 Identities=38% Similarity=0.705 Sum_probs=58.6
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeec---ccCccccccCCcccccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYD---LFGTTDGFSGQDSASRN 824 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~---~~~~~~~i~g~~~~~~~ 824 (1578)
.+++..+|.+.++..+.+++|+|.||||||++|+.+.|.|+++++.+.+.++.+..++++ .++...++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~d~~~~l~~~~~V~~------- 79 (111)
T cd02963 7 YSLTFSQYENEIVPKSFKKPYLIKITSDWCFSCIHIEPVWKEVIQELEPLGVGIATVNAGHERRLARKLGAHS------- 79 (111)
T ss_pred heeeHHHHHHhhccccCCCeEEEEEECCccHhHHHhhHHHHHHHHHHHhcCceEEEEeccccHHHHHHcCCcc-------
Confidence 345667888888777788999999999999999999999999999998654433333322 2444444443
Q ss_pred ccccccCccccccccc
Q psy12972 825 FHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 825 ~~~i~~~Ptiklf~~~ 840 (1578)
+||+.+|..|
T Consensus 80 ------~Pt~~i~~~g 89 (111)
T cd02963 80 ------VPAIVGIING 89 (111)
T ss_pred ------CCEEEEEECC
Confidence 4888887755
|
DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network. |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.1e-08 Score=122.54 Aligned_cols=137 Identities=13% Similarity=0.047 Sum_probs=89.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||+|+....-... .. ..-.+..|.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~---------------------------------~~~~~~~e~ 94 (370)
T cd05621 49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIK-RS---------------------------------DSAFFWEER 94 (370)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hh---------------------------------hHHHHHHHH
Confidence 56999999999999976 68999999875311000 00 001123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+..+ .+...+.+-..+ ......+|||||++|..|.++. ....++...+...+.+++ ++.+|..|++|+|
T Consensus 95 ~i~~~~----~hp~iv~~~~~~-~~~~~~~lv~Ey~~gg~L~~~l--~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrD 167 (370)
T cd05621 95 DIMAFA----NSPWVVQLFCAF-QDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRD 167 (370)
T ss_pred HHHHhC----CCCCEeeEEEEE-EcCCEEEEEEcCCCCCcHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 333332 222222222222 2234468999999999998864 344566555555444444 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 168 LKp~NILl~~~~~~kL~DFG~a~~ 191 (370)
T cd05621 168 VKPDNMLLDKHGHLKLADFGTCMK 191 (370)
T ss_pred CCHHHEEECCCCCEEEEeccccee
Confidence 999999975 599999997643
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >KOG0663|consensus | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.3e-08 Score=116.01 Aligned_cols=138 Identities=17% Similarity=0.214 Sum_probs=92.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-|+.||+|.||||+.+ +++-||+|-.+++-++. .|.+.. .+|.
T Consensus 82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~--------------------GFPIts---------------LREI 126 (419)
T KOG0663|consen 82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKE--------------------GFPITS---------------LREI 126 (419)
T ss_pred hhcccCcceeEEEeccCCcceeEEeeecccccccC--------------------CCcchh---------------HHHH
Confidence 56899999999999965 89999999776654221 122111 2333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
.-+.+++ |...|.|-+|+-.-. .+-+|||||++- .|..+..--...+...++--.+.+++ ++.+|.+.++||
T Consensus 127 niLl~~~----H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHR 201 (419)
T KOG0663|consen 127 NILLKAR----HPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHR 201 (419)
T ss_pred HHHHhcC----CCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEec
Confidence 3444443 445577777764433 234699999964 33333222234567777777777776 889999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+||.|+|.. -+++.|||.++.
T Consensus 202 DLK~SNLLm~~~G~lKiaDFGLAR~ 226 (419)
T KOG0663|consen 202 DLKTSNLLLSHKGILKIADFGLARE 226 (419)
T ss_pred ccchhheeeccCCcEEecccchhhh
Confidence 9999999954 477788886643
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.5e-08 Score=112.17 Aligned_cols=128 Identities=13% Similarity=0.129 Sum_probs=83.6
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.+++++||.|+.+.- +|++|+.+.. .. + .|.++.+... =|++|++
T Consensus 8 ~~l~~~~f~~v~~~~~-~~~k~~~~~l----~~----~--------------------~~~~~~~~~~-----l~~rE~~ 53 (218)
T PRK12274 8 EPLKSDTFGRILLVRG-GERKFVRRDL----SA----A--------------------PWWLRGVAWW-----LARREAL 53 (218)
T ss_pred eeecCCCcceEEEeec-CCceeeeccc----cc----c--------------------hhhhhhHHHH-----HHHHHHH
Confidence 6799999999997755 6777765522 11 0 0111111111 2478888
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCC-C
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADP-H 567 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~Dp-H 567 (1578)
.++++.. ...+|+++.- ....++|||++|.+|..... . ....+...+.+ .++++|..|++|+|+ +
T Consensus 54 iL~~L~~------~~~vP~ll~~--~~~~lvmeyI~G~~L~~~~~--~---~~~~~~~qi~~-~L~~lH~~GIvHrDL~k 119 (218)
T PRK12274 54 ALRQLDG------LPRTPRLLHW--DGRHLDRSYLAGAAMYQRPP--R---GDLAYFRAARR-LLQQLHRCGVAHNDLAK 119 (218)
T ss_pred HHHhcCC------CCCCCEEEEE--cCEEEEEeeecCccHHhhhh--h---hhHHHHHHHHH-HHHHHHHCcCccCCCCC
Confidence 8887742 2457888742 56799999999999865321 1 11233444443 477899999999999 6
Q ss_pred CCCCCCC---eeEEecCCch
Q psy12972 568 SGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 568 PGNilv~---~v~liDfG~~ 584 (1578)
|+|||++ .+++||||..
T Consensus 120 p~NILv~~~g~i~LIDFG~A 139 (218)
T PRK12274 120 EANWLVQEDGSPAVIDFQLA 139 (218)
T ss_pred cceEEEcCCCCEEEEECCCc
Confidence 9999964 4777777754
|
|
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=98.80 E-value=4e-08 Score=117.23 Aligned_cols=152 Identities=20% Similarity=0.193 Sum_probs=101.7
Q ss_pred HHHHhCCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHH
Q psy12972 391 FLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWV 469 (1578)
Q Consensus 391 ~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~ 469 (1578)
...-++.++++.|... +.||.|++|+||+|+.. +|+.||||+....-...
T Consensus 15 ~~~~~~~~~~~~f~~~--~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~--------------------------- 65 (317)
T cd06635 15 AELFFKEDPEKLFTDL--REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS--------------------------- 65 (317)
T ss_pred HHHhcCCCchhhhhhh--heeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCc---------------------------
Confidence 3456778888888865 67999999999999965 78999999875321100
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHH
Q psy12972 470 INELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLF 549 (1578)
Q Consensus 470 ~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~ 549 (1578)
. ....++..|++.+.++. +...+.+...+. .....+|||||+.| ++.+........++...+...+.
T Consensus 66 -~------~~~~~~~~e~~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~ 132 (317)
T cd06635 66 -N------EKWQDIIKEVKFLQRIK----HPNSIEYKGCYL-REHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITH 132 (317)
T ss_pred -h------HHHHHHHHHHHHHHhCC----CCCEEEEEEEEe-eCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHH
Confidence 0 01123455655555442 222233333332 23457899999987 55555433344566666666555
Q ss_pred HHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCch
Q psy12972 550 TAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 550 ~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
+++ +..+|..|++|+|++|+||++. .++++|||..
T Consensus 133 ~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~ 172 (317)
T cd06635 133 GALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSA 172 (317)
T ss_pred HHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCc
Confidence 555 6788999999999999999965 4899999965
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >KOG0658|consensus | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.9e-09 Score=122.22 Aligned_cols=136 Identities=21% Similarity=0.217 Sum_probs=85.8
Q ss_pred CCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 407 DENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 407 d~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
+.+-+|+||||.||+|.+. ++++||||=..|+-+-. .+
T Consensus 28 ~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-----------------------------------------nr 66 (364)
T KOG0658|consen 28 AVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-----------------------------------------NR 66 (364)
T ss_pred eeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-----------------------------------------cH
Confidence 4478999999999999976 67999999665543211 11
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCCCCc-eE---EEEeccCCCcCCchhhH---hhcCCCHHHHHHHHHHHH--HHHH
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDKSST-RV---LTTEFIDGVKISDKEGL---LEKGFSLADVDRKLFTAF--AEQI 556 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~-~V---LVME~i~G~~l~d~~~l---~~~~~~~~~v~~~l~~~~--l~~i 556 (1578)
|..-+. .+.|...|..=.-+..-++. .+ |||||+ ..+|.+.... .+..++.-++--...++| +..+
T Consensus 67 El~im~----~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym-P~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yL 141 (364)
T KOG0658|consen 67 ELQIMR----KLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM-PETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYL 141 (364)
T ss_pred HHHHHH----hcCCcCeeeEEEEEEecCCCchhHHHHHHHhc-hHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHH
Confidence 222222 11222223332223222222 33 899999 4566655331 123444444444444555 7789
Q ss_pred HHcCccccCCCCCCCCCC----eeEEecCCchhhhh
Q psy12972 557 FQTGFVHADPHSGNDVNT----WLYPVDLGDKFRLV 588 (1578)
Q Consensus 557 ~~~G~vH~DpHPGNilv~----~v~liDfG~~~~l~ 588 (1578)
|.+|++|||+||.|||+. .+++.|||++.+++
T Consensus 142 h~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~ 177 (364)
T KOG0658|consen 142 HSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLV 177 (364)
T ss_pred HhcCcccCCCChheEEEcCCCCeEEeccCCcceeec
Confidence 999999999999999964 59999999986554
|
|
| >PRK01356 hscB co-chaperone HscB; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=5.8e-09 Score=112.04 Aligned_cols=66 Identities=30% Similarity=0.494 Sum_probs=57.0
Q ss_pred CCCccccccccc--CCHHHHHHHhhhhhhhcCCCCCCChh----HHHHHHHHHHHHHHcCCHHHHHhccccC
Q psy12972 637 LDPYETLGVPRT--ASLQEIRKNYKRLVVEWHPDKNNDPT----AQEKFLQLTEAYNILSDAERRKQYDLFG 702 (1578)
Q Consensus 637 ~d~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~----a~~~f~~i~~Ay~~L~d~~~R~~yD~~~ 702 (1578)
.|+|++||+++. ++..+|+++||++++++|||+..... +...+..||+||++|+||.+|+.|+..-
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l 73 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLL 73 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Confidence 589999999985 78999999999999999999986432 2245789999999999999999998543
|
|
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.5e-08 Score=122.01 Aligned_cols=137 Identities=15% Similarity=0.057 Sum_probs=89.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||+|+....-... ..+ .-.+..|.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~-~~~---------------------------------~~~~~~e~ 94 (371)
T cd05622 49 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK-RSD---------------------------------SAFFWEER 94 (371)
T ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhh-hHH---------------------------------HHHHHHHH
Confidence 67999999999999976 78999999975311000 000 01123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+..+ .+...+.+-..+. -....+|||||++|.+|.++. ....++...+...+.+++ ++.+|..|++|+|
T Consensus 95 ~i~~~~----~hp~iv~~~~~~~-~~~~~~lv~Ey~~gg~L~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD 167 (371)
T cd05622 95 DIMAFA----NSPWVVQLFYAFQ-DDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTAEVVLALDAIHSMGFIHRD 167 (371)
T ss_pred HHHHhC----CCCCCCeEEEEEE-cCCEEEEEEcCCCCCcHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCC
Confidence 433332 2222222222221 223467999999999998763 445566655554444444 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 168 Lkp~NIll~~~~~ikL~DfG~a~~ 191 (371)
T cd05622 168 VKPDNMLLDKSGHLKLADFGTCMK 191 (371)
T ss_pred CCHHHEEECCCCCEEEEeCCceeE
Confidence 999999975 599999997643
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd02951 SoxW SoxW family; SoxW is a bacterial periplasmic TRX, containing a redox active CXXC motif, encoded by a genetic locus (sox operon) involved in thiosulfate oxidation | Back alignment and domain information |
|---|
Probab=98.79 E-value=1e-08 Score=105.47 Aligned_cols=89 Identities=15% Similarity=0.253 Sum_probs=73.6
Q ss_pred CC-CcEEEEEEcCCCcccccccHHHH---HHHHHhCCCceEEEEEECccc-------------hhhHhHcCccccCCcEE
Q psy12972 872 YT-TPHLILFYSDWCFACLQVEPIFK---KLMDELSPLGVGFFTVHVHNE-------------QGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 872 ~~-~~~LV~FyapwCg~Ck~l~p~~~---~lA~~l~~~~v~~a~VDc~~~-------------~~L~~k~gV~~~~PTl~ 934 (1578)
.. ++++|.||++||++|+.+.|.+. .+...+++ ++.+..||.+.+ .+++++|+|.+ +||++
T Consensus 12 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~i~~d~~~~~~~~~~~~~~~~~l~~~~~v~~-~Pt~~ 89 (125)
T cd02951 12 DGKKPLLLLFSQPGCPYCDKLKRDYLNDPAVQAYIRA-HFVVVYINIDGDKEVTDFDGEALSEKELARKYRVRF-TPTVI 89 (125)
T ss_pred cCCCcEEEEEeCCCCHHHHHHHHHhcCcHHHHHHHHh-heEEEEEEccCCceeeccCCCCccHHHHHHHcCCcc-ccEEE
Confidence 45 89999999999999999999885 56666654 388899998764 68999999998 99999
Q ss_pred EEcC--CccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTD--GRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~--G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|.+ |+......|..+.+.+.+++...+
T Consensus 90 ~~~~~gg~~~~~~~G~~~~~~~~~~l~~~~ 119 (125)
T cd02951 90 FLDPEGGKEIARLPGYLPPDEFLAYLEYVQ 119 (125)
T ss_pred EEcCCCCceeEEecCCCCHHHHHHHHHHHH
Confidence 9975 477767778888888888887654
|
Sulfur bacteria oxidize sulfur compounds to provide reducing equivalents for carbon dioxide fixation during autotrophic growth and the respiratory electron transport chain. It is unclear what the role of SoxW is, since it has been found to be dispensable in the oxidation of thiosulfate to sulfate. SoxW is specifically kept in the reduced state by SoxV, which is essential in thiosulfate oxidation. |
| >PRK05014 hscB co-chaperone HscB; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.9e-09 Score=112.68 Aligned_cols=64 Identities=27% Similarity=0.503 Sum_probs=56.7
Q ss_pred CCCccccccccc--CCHHHHHHHhhhhhhhcCCCCCCCh------hHHHHHHHHHHHHHHcCCHHHHHhccc
Q psy12972 637 LDPYETLGVPRT--ASLQEIRKNYKRLVVEWHPDKNNDP------TAQEKFLQLTEAYNILSDAERRKQYDL 700 (1578)
Q Consensus 637 ~d~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~------~a~~~f~~i~~Ay~~L~d~~~R~~yD~ 700 (1578)
.|||++|||++. ++..+|+++||++++++|||+.... .+.+.+..||+||++|+||.+|+.|+.
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll 72 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL 72 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence 489999999985 7889999999999999999997532 245689999999999999999999985
|
|
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.7e-08 Score=115.95 Aligned_cols=143 Identities=17% Similarity=0.187 Sum_probs=96.4
Q ss_pred hhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHH
Q psy12972 400 SQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLE 478 (1578)
Q Consensus 400 ~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 478 (1578)
++.|..+ +.||+|++|+||+|+.. +|+.||||+....... .
T Consensus 3 ~~~y~~~--~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~------------------------------------~ 44 (277)
T cd06640 3 EELFTKL--ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAE------------------------------------D 44 (277)
T ss_pred HHhhhhh--hhcccCCCeEEEEEEEccCCEEEEEEEEeccccH------------------------------------H
Confidence 3444444 56999999999999975 6899999987421100 0
Q ss_pred HHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHH
Q psy12972 479 QELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQI 556 (1578)
Q Consensus 479 ~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i 556 (1578)
..-++.+|++.+.++. +...+.+...+.+ ....+|||||++|.+|.+.. ....++...+...+.+++ +..+
T Consensus 45 ~~~~~~~e~~~l~~l~----h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~i--~~~~l~~~~~~~~~~~l~~~l~~l 117 (277)
T cd06640 45 EIEDIQQEITVLSQCD----SPYVTKYYGSYLK-GTKLWIIMEYLGGGSALDLL--RAGPFDEFQIATMLKEILKGLDYL 117 (277)
T ss_pred HHHHHHHHHHHHHhCC----CCCEeeEEEEEEE-CCEEEEEEecCCCCcHHHHH--hcCCCCHHHHHHHHHHHHHHHHHH
Confidence 1123455655554442 2222333333322 34678999999999998763 345566666666555555 6788
Q ss_pred HHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 557 FQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 557 ~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|..|++|+|++|+||++. .++++|||....+
T Consensus 118 h~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~ 151 (277)
T cd06640 118 HSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQL 151 (277)
T ss_pred HhCCccCcCCChhhEEEcCCCCEEEcccccceec
Confidence 999999999999999965 4899999976443
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >KOG0575|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.3e-08 Score=122.11 Aligned_cols=139 Identities=18% Similarity=0.145 Sum_probs=94.5
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
.-||-|++|+||+|+. .+|+.||+||.....- . .. ..+..+.+|+
T Consensus 24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l---~-----------------k~--------~~reKv~~EI------ 69 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLL---K-----------------KP--------KQREKVLNEI------ 69 (592)
T ss_pred eeeccCcceEEEEEEEcCCCcEEEEEEeehHHh---c-----------------Cc--------chHHHHHHHH------
Confidence 5699999999999996 7999999999742110 0 00 0011121221
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+...++|...|.+-.-+. -++.-+||.|.++-.+|..+.. ++..++..++...+.+++ +..+|.+|++|||
T Consensus 70 ----eIHr~L~HpnIV~f~~~FE-Ds~nVYivLELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRD 143 (592)
T KOG0575|consen 70 ----EIHRSLKHPNIVQFYHFFE-DSNNVYIVLELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRD 143 (592)
T ss_pred ----HHHHhcCCCcEEeeeeEee-cCCceEEEEEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecc
Confidence 2233344444344433332 2334459999999999988765 456677777777777776 8899999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++-|||++. .|++-|||.+.++
T Consensus 144 LKLGNlfL~~~~~VKIgDFGLAt~l 168 (592)
T KOG0575|consen 144 LKLGNLFLNENMNVKIGDFGLATQL 168 (592)
T ss_pred cchhheeecCcCcEEecccceeeee
Confidence 999999976 4888888876554
|
|
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.9e-08 Score=113.93 Aligned_cols=134 Identities=19% Similarity=0.148 Sum_probs=91.5
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|+||+|...+|+.||||+...+... +-+|..|.+
T Consensus 10 ~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05112 10 QEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS--------------------------------------EEDFIEEAQ 51 (256)
T ss_pred eeecCcccceEEEEEEeCCCeEEEEECCCCCCC--------------------------------------HHHHHHHHH
Confidence 679999999999999888899999987543210 123456666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++. +...+.+-..+ ...+..+++|||++|..|.+........++.+.+...+.+++ +..+|..|++|+|+
T Consensus 52 ~l~~l~----~~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl 126 (256)
T cd05112 52 VMMKLS----HPKLVQLYGVC-TERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDL 126 (256)
T ss_pred HHHhCC----CCCeeeEEEEE-ccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence 666653 22212222222 233567899999999999876432223355555555444444 67789999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|+||++. .++++|||...
T Consensus 127 ~p~ni~i~~~~~~~l~d~g~~~ 148 (256)
T cd05112 127 AARNCLVGENQVVKVSDFGMTR 148 (256)
T ss_pred ccceEEEcCCCeEEECCCccee
Confidence 99999975 48899999754
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >KOG0582|consensus | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.3e-08 Score=117.74 Aligned_cols=130 Identities=21% Similarity=0.236 Sum_probs=94.1
Q ss_pred cccccccceEEEEEE-ecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAV-TKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~-l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-||.|.-|+||+|+ .+.|+.||||+.. +++ ...|+. ..+.|.
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~in--LEk-c~~~ld---------------------------------~l~kE~ 75 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKIIN--LEK-CNNDLD---------------------------------ALRKEV 75 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEee--hhh-hhhhHH---------------------------------HHHHHH
Confidence 457888889999999 5588999999763 111 111111 135666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-----CceEEEEeccCCCcCCchhh-HhhcCCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-----STRVLTTEFIDGVKISDKEG-LLEKGFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-----t~~VLVME~i~G~~l~d~~~-l~~~~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
.++..+. +| .++..+| ..-++||-|+.|+++.|+.. .-..|++...++..+.+++ +..+|.+
T Consensus 76 ~~msl~~-----HP-----NIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~ 145 (516)
T KOG0582|consen 76 QTMSLID-----HP-----NIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN 145 (516)
T ss_pred HHhhhcC-----CC-----CcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc
Confidence 6766553 23 2222222 34479999999999999754 3356888888888887777 8999999
Q ss_pred CccccCCCCCCCCCC---eeEEecCCch
Q psy12972 560 GFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 560 G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
|.+|||+|+||||++ .|++-|||..
T Consensus 146 G~IHRdvKAgnILi~~dG~VkLadFgvs 173 (516)
T KOG0582|consen 146 GHIHRDVKAGNILIDSDGTVKLADFGVS 173 (516)
T ss_pred CceecccccccEEEcCCCcEEEcCceee
Confidence 999999999999964 6999999965
|
|
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=98.78 E-value=3e-08 Score=118.33 Aligned_cols=136 Identities=17% Similarity=0.131 Sum_probs=90.3
Q ss_pred cccccccceEEEEEEe----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVT----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+++. .+|+.||||+.+...... .....+.
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~-----------------------------------~~~~~~~ 46 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKV-----------------------------------RDRVRTK 46 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhh-----------------------------------hhHHHHH
Confidence 4689999999999874 368999999986421100 0011234
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
.|++.+.++. +..-+.+-..+ ......+|||||++|..|.+... ....++...+...+.+++ +..+|..|++
T Consensus 47 ~E~~~l~~l~----h~niv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~ 120 (318)
T cd05582 47 MERDILAEVN----HPFIVKLHYAF-QTEGKLYLILDFLRGGDLFTRLS-KEVMFTEEDVKFYLAELALALDHLHSLGII 120 (318)
T ss_pred HHHHHHHhCC----CCCcccEEEEE-EcCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 5666555542 22222222222 12345679999999998876532 233466666665555555 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.||++. .++++|||...
T Consensus 121 H~dlkp~Nil~~~~~~~kL~Dfg~~~ 146 (318)
T cd05582 121 YRDLKPENILLDEEGHIKLTDFGLSK 146 (318)
T ss_pred cCCCCHHHeEECCCCcEEEeeccCCc
Confidence 999999999975 58999999754
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.2e-08 Score=118.90 Aligned_cols=136 Identities=13% Similarity=0.151 Sum_probs=90.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|..||+|+.+...... .. -.+.+|.
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~------------------------------~~------~~~~~E~ 54 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPA------------------------------IR------NQIIREL 54 (331)
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEeecccCHH------------------------------HH------HHHHHHH
Confidence 56999999999999976 79999999986543211 00 1234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~vH~ 564 (1578)
+.+.++. +..-+.+-..+.. ....+|||||++|.+|.++.. ....++...+...+.++. +..+|. +|++|+
T Consensus 55 ~~l~~l~----h~~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~ 128 (331)
T cd06649 55 QVLHECN----SPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLK-EAKRIPEEILGKVSIAVLRGLAYLREKHQIMHR 128 (331)
T ss_pred HHHHHCC----CCCCCeEEEEEEE-CCEEEEEeecCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcC
Confidence 5555542 2222333333322 345689999999999988743 223455555555444444 566776 479999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.|||+. .++++|||....
T Consensus 129 dlkp~Nil~~~~~~~kl~Dfg~~~~ 153 (331)
T cd06649 129 DVKPSNILVNSRGEIKLCDFGVSGQ 153 (331)
T ss_pred CCChhhEEEcCCCcEEEccCccccc
Confidence 9999999965 589999997643
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0032|consensus | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.6e-08 Score=121.16 Aligned_cols=138 Identities=20% Similarity=0.146 Sum_probs=101.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|.+|+||+++.+ +|+++|+|+........-. ..-+.++|.
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~----------------------------------~~~~v~~Ev 86 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKE----------------------------------DREDVRREV 86 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccc----------------------------------cHHHHHHHH
Confidence 67999999999999977 5999999998532211000 223567788
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.++++.. +...|.++.+|.. .+.-.||||+++|..|-|...-. +.+..+.+..+.++. ++++|..|++|+|
T Consensus 87 ~il~~l~~---hpniv~l~~~~e~-~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~gvvHrD 160 (382)
T KOG0032|consen 87 AILQQLSG---HPNIVQLKDAFED-PDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLGVVHRD 160 (382)
T ss_pred HHHHhccC---CCCEEEEEEEEEc-CCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCCceecc
Confidence 88877753 4455788888743 34568999999999998864322 477666666555555 7899999999999
Q ss_pred CCCCCCCCC-------eeEEecCCchhh
Q psy12972 566 PHSGNDVNT-------WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~-------~v~liDfG~~~~ 586 (1578)
++|.|+|.. .++++|||....
T Consensus 161 lKpEN~L~~~~~~~~~~ik~~DFGla~~ 188 (382)
T KOG0032|consen 161 LKPENLLLASKDEGSGRIKLIDFGLAKF 188 (382)
T ss_pred CCHHHeeeccccCCCCcEEEeeCCCceE
Confidence 999999932 589999997643
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=3e-08 Score=119.87 Aligned_cols=137 Identities=18% Similarity=0.024 Sum_probs=88.6
Q ss_pred cccccccceEEEEEEecC--CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKE--GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~--G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
+.||.|++|.||+|+.++ +..||||+........ . ...-.+.+|
T Consensus 36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~----------------------------~------~~~~~~~~E 81 (340)
T PTZ00426 36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIK----------------------------Q------KQVDHVFSE 81 (340)
T ss_pred EEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhh----------------------------h------hhHHHHHHH
Confidence 689999999999998653 4689999875321000 0 000123456
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
++.+.++. +...+.+-..+. .....+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|+
T Consensus 82 ~~~l~~l~----hp~Iv~~~~~~~-~~~~~~lv~Ey~~~g~L~~~i~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 155 (340)
T PTZ00426 82 RKILNYIN----HPFCVNLYGSFK-DESYLYLVLEFVIGGEFFTFLR-RNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYR 155 (340)
T ss_pred HHHHHhCC----CCCCcceEEEEE-eCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcc
Confidence 65555543 222233323322 2244679999999999987643 233455555444444443 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|+|||+. .++++|||...
T Consensus 156 DLkp~NILl~~~~~ikL~DFG~a~ 179 (340)
T PTZ00426 156 DLKPENLLLDKDGFIKMTDFGFAK 179 (340)
T ss_pred CCCHHHEEECCCCCEEEecCCCCe
Confidence 9999999975 48999999764
|
|
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.2e-08 Score=115.04 Aligned_cols=137 Identities=17% Similarity=0.154 Sum_probs=93.1
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+. .+|+.||||+.+...... + .-++..|.
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~---~---------------------------------~~~~~~e~ 50 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDD---D---------------------------------VSDIQREV 50 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCCch---h---------------------------------HHHHHHHH
Confidence 5799999999999996 589999999876432210 0 01234566
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++.. ..++. +.+...+ .-.+..+|||||++|.+|.++. ....++...+...+.+++ +..+|..|++|+
T Consensus 51 ~~l~~l~~--~~~~~vi~~~~~~-~~~~~~~lv~e~~~~~~L~~~~--~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~ 125 (277)
T cd06917 51 ALLSQLRQ--SQPPNITKYYGSY-LKGPRLWIIMEYAEGGSVRTLM--KAGPIAEKYISVIIREVLVALKYIHKVGVIHR 125 (277)
T ss_pred HHHHHhcc--CCCCCeeeEeeee-eeCCEEEEEEecCCCCcHHHHH--HccCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 66666643 12332 2232322 2235568999999999998763 334566555555444444 678999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.||+++ .++++|||....
T Consensus 126 dl~p~ni~i~~~~~~~l~dfg~~~~ 150 (277)
T cd06917 126 DIKAANILVTNTGNVKLCDFGVAAL 150 (277)
T ss_pred CcCHHHEEEcCCCCEEEccCCceee
Confidence 9999999965 588999996543
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.2e-08 Score=118.89 Aligned_cols=135 Identities=18% Similarity=0.158 Sum_probs=87.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+....... +..+.+|+
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~E~ 55 (309)
T cd07872 12 EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGA------------------------------------PCTAIREV 55 (309)
T ss_pred EEecccCCEEEEEEEecCCCCeEEEEEeeccccCCc------------------------------------chhHHHHH
Confidence 67999999999999965 789999998754321100 01123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-..+. .....+|||||++| .+.+........++...+...+.+++ +..+|..|++|+|
T Consensus 56 ~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~d 129 (309)
T cd07872 56 SLLKDLK----HANIVTLHDIVH-TDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRD 129 (309)
T ss_pred HHHHhCC----CCCcceEEEEEe-eCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 5555542 333333333332 23456899999987 45443221222345555544444444 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+||++. .++++|||...
T Consensus 130 lkp~Nill~~~~~~kl~Dfg~~~ 152 (309)
T cd07872 130 LKPQNLLINERGELKLADFGLAR 152 (309)
T ss_pred CCHHHEEECCCCCEEECccccce
Confidence 999999975 48999999764
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.7e-08 Score=115.32 Aligned_cols=138 Identities=15% Similarity=0.053 Sum_probs=92.7
Q ss_pred cccccccceEEEEEEe-----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVT-----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|.||+|+. .+|+.||||+.++...... .-++
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~------------------------------------~~~~ 53 (284)
T cd05079 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH------------------------------------IADL 53 (284)
T ss_pred eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHH------------------------------------HHHH
Confidence 4589999999999974 3688999998875432110 0124
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|.+.++++ .+...+.+.....+. ....+|||||++|.+|.++..-....++...+...+.++. +..+|..|
T Consensus 54 ~~e~~~l~~l----~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g 129 (284)
T cd05079 54 KKEIEILRNL----YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ 129 (284)
T ss_pred HHHHHHHHhC----CCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 5555555554 233334444443332 1235799999999999887432222356666666555555 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|.||++. .+++.|||....
T Consensus 130 i~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 130 YVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred eeecccchheEEEcCCCCEEECCCccccc
Confidence 99999999999964 488889986643
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.9e-08 Score=115.06 Aligned_cols=135 Identities=13% Similarity=0.140 Sum_probs=92.0
Q ss_pred cccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|+++ .+..||+|+.+.+.... .+.+|.
T Consensus 11 ~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~------------------------------------~~~~~~ 54 (266)
T cd05064 11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDK------------------------------------QRRGFL 54 (266)
T ss_pred eeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHH------------------------------------HHHHHH
Confidence 56999999999999864 46799999876542110 012345
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
.|...+.++ .+..-+.+-..+. .....+|||||++|..|.++.......++...+...+.+++ +..+|..|++
T Consensus 55 ~e~~~l~~l----~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~ii 129 (266)
T cd05064 55 AEALTLGQF----DHSNIVRLEGVIT-RGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYV 129 (266)
T ss_pred HHHHHHhcC----CCCCcCeEEEEEe-cCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 566555543 2333344433332 23456899999999999887543233466666665555554 6789999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCch
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~ 584 (1578)
|+|++|.||++. .+++.|||..
T Consensus 130 H~dikp~nili~~~~~~~l~dfg~~ 154 (266)
T cd05064 130 HKGLAAHKVLVNSDLVCKISGFRRL 154 (266)
T ss_pred eccccHhhEEEcCCCcEEECCCccc
Confidence 999999999965 3788899864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.5e-08 Score=111.94 Aligned_cols=135 Identities=22% Similarity=0.300 Sum_probs=95.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||+|++|+||+|... +|+.|++|+.++.... ..-++.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-------------------------------------~~~~~~~e~ 48 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKE-------------------------------------KKEKIINEI 48 (253)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEecccchh-------------------------------------HHHHHHHHH
Confidence 68999999999999976 7999999998764321 011234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+.++. ++. ++.++. ......+++|||++|.+|.++.......++...+...+.+++ +..+|..|++|
T Consensus 49 ~~l~~l~-----~~~--i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h 121 (253)
T cd05122 49 QILKKCK-----HPN--IVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIH 121 (253)
T ss_pred HHHHhCC-----CCC--EeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEec
Confidence 5444443 222 233332 123567899999999999887543324677777776666665 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+|++|+||++. .++++|||....+
T Consensus 122 ~dl~p~ni~i~~~~~~~l~d~~~~~~~ 148 (253)
T cd05122 122 RDIKAANILLTSDGEVKLIDFGLSAQL 148 (253)
T ss_pred CCCCHHHEEEccCCeEEEeeccccccc
Confidence 99999999965 5899999976443
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.6e-08 Score=122.01 Aligned_cols=138 Identities=13% Similarity=0.051 Sum_probs=89.4
Q ss_pred CcccccccceEEEEEEe------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHH
Q psy12972 408 ENPIAAASLAQVFRAVT------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQEL 481 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 481 (1578)
.+.||.|++|.||+|+. .++..||||+.++..... .+-
T Consensus 40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~------------------------------------~~~ 83 (375)
T cd05104 40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLT------------------------------------ERE 83 (375)
T ss_pred hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcH------------------------------------HHH
Confidence 37899999999999973 246789999987542210 001
Q ss_pred hHHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhh------------------------
Q psy12972 482 DFLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE------------------------ 536 (1578)
Q Consensus 482 Df~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~------------------------ 536 (1578)
.+.+|.+.+..+. .++. +.+-... ......+|||||++|.+|.+...-..
T Consensus 84 ~~~~Ei~il~~l~----~HpnIv~l~~~~-~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (375)
T cd05104 84 ALMSELKVLSYLG----NHINIVNLLGAC-TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQR 158 (375)
T ss_pred HHHHHHHHHHHhc----CCcceeeeeeee-ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhh
Confidence 2345666666552 2232 2222222 22355789999999998876532110
Q ss_pred --------------------------------------------------cCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 537 --------------------------------------------------KGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 537 --------------------------------------------------~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..++...+...+.++. +..+|..|++|+
T Consensus 159 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~ 238 (375)
T cd05104 159 EMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHR 238 (375)
T ss_pred cccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 1234444444444444 678999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.|||+. .+++.|||....
T Consensus 239 Dlkp~Nill~~~~~~kl~DfG~a~~ 263 (375)
T cd05104 239 DLAARNILLTHGRITKICDFGLARD 263 (375)
T ss_pred CCchhhEEEECCCcEEEecCcccee
Confidence 9999999965 478999997643
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=98.76 E-value=4.1e-08 Score=115.22 Aligned_cols=138 Identities=15% Similarity=0.069 Sum_probs=94.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+..... -..+..+.+|+
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~----------------------------------~~~~~~~~~E~ 51 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKK----------------------------------RKGESMALNEK 51 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhh----------------------------------hhHHHHHHHHH
Confidence 56999999999999864 79999999875432110 00112235566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.+++ +...+.+...+. .....+++|||++|..+.+..... ..+++...+...+.+++ +..+|..|++|+
T Consensus 52 ~il~~l~----~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~ 126 (285)
T cd05632 52 QILEKVN----SQFVVNLAYAYE-TKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYR 126 (285)
T ss_pred HHHHHcC----CcCceeEEEEEe-cCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence 6666553 222233333332 223467999999999987664322 23567777666666655 688999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|+||++. .++++|||...
T Consensus 127 dikp~Nili~~~~~~kl~Dfg~~~ 150 (285)
T cd05632 127 DLKPENILLDDYGHIRISDLGLAV 150 (285)
T ss_pred CCCHHHEEECCCCCEEEecCCcce
Confidence 9999999975 48999999764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=98.76 E-value=4.5e-08 Score=114.10 Aligned_cols=142 Identities=17% Similarity=0.188 Sum_probs=97.2
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
++++|..+ +.||+|++|.||+|+.. +|+.||||+.......
T Consensus 2 ~~~~~~~~--~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~------------------------------------ 43 (277)
T cd06641 2 PEELFTKL--EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE------------------------------------ 43 (277)
T ss_pred HHHhhhhh--eeEeecCCeEEEEEEECCCCcEEEEEEeccccch------------------------------------
Confidence 35666666 46999999999999864 7899999986421100
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
...-++.+|...+.++. +..-+.+...+. .....+|||||++|.++.++ +....++...+...+.+++ +..
T Consensus 44 ~~~~~~~~e~~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~~~~l~~~--i~~~~~~~~~~~~~~~~l~~~l~~ 116 (277)
T cd06641 44 DEIEDIQQEITVLSQCD----SPYVTKYYGSYL-KDTKLWIIMEYLGGGSALDL--LEPGPLDETQIATILREILKGLDY 116 (277)
T ss_pred HHHHHHHHHHHHHHhcC----CCCEeEEEEEEE-eCCeEEEEEEeCCCCcHHHH--HhcCCCCHHHHHHHHHHHHHHHHH
Confidence 00123456666665543 222233333332 23457899999999988776 3345567776666666555 678
Q ss_pred HHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 556 IFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|..|++|+|++|+||++. .++++|||...
T Consensus 117 lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06641 117 LHSEKKIHRDIKAANVLLSEHGEVKLADFGVAG 149 (277)
T ss_pred HccCCeecCCCCHHhEEECCCCCEEEeecccce
Confidence 8999999999999999965 48899999754
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.75 E-value=3e-08 Score=114.38 Aligned_cols=135 Identities=14% Similarity=0.111 Sum_probs=94.6
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|+.|.||+|...+++.||||..+++-.. +-+|.+|.+
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~--------------------------------------~~~~~~e~~ 53 (261)
T cd05068 12 RKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD--------------------------------------PKDFLAEAQ 53 (261)
T ss_pred EEecccCCccEEEEEecCCeEEEEEeeCCCccc--------------------------------------HHHHHHHHH
Confidence 689999999999999888899999987653110 112455666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++. +..-+.+-..+ ......+++|||++|.+|.+...... ..++...+...+.+++ +..+|..|++|+|
T Consensus 54 ~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 128 (261)
T cd05068 54 IMKKLR----HPKLIQLYAVC-TLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRD 128 (261)
T ss_pred HHHHCC----CCCccceeEEE-ecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence 666653 22222222222 22345689999999999988743211 2466666666666555 7789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+||+++ .++++|||....
T Consensus 129 l~p~Nil~~~~~~~~l~dfg~~~~ 152 (261)
T cd05068 129 LAARNVLVGENNICKVADFGLARV 152 (261)
T ss_pred CCcceEEEcCCCCEEECCcceEEE
Confidence 999999965 589999997643
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >KOG1166|consensus | Back alignment and domain information |
|---|
Probab=98.75 E-value=6.7e-09 Score=135.60 Aligned_cols=139 Identities=19% Similarity=0.140 Sum_probs=92.4
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+-+|-||.|+||+|+..+|+.|||||++|-.. ++.-+ ..++..+|. ..+..
T Consensus 704 ~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~----WEfYI--------------------~~q~~~RLk-----~~~~~ 754 (974)
T KOG1166|consen 704 KEIGEGSYGSVYVATHSNGKLVALKVEKPPNP----WEFYI--------------------CLQVMERLK-----PQMLP 754 (974)
T ss_pred eeeccccceEEEEeecCCCcEEEEEeecCCCc----eeeee--------------------hHHHHHhhc-----hhhhc
Confidence 56899999999999988999999999999653 22111 111111111 00000
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
-...+... + + +.+.-||||||.+=++|-|+.. .....+..-++-..++++ ++++|..|+||||+
T Consensus 755 ~~~~~~~a-------~---~---~~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDi 820 (974)
T KOG1166|consen 755 SIMHISSA-------H---V---FQNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDI 820 (974)
T ss_pred chHHHHHH-------H---c---cCCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcceecccC
Confidence 00011100 0 1 3456789999999888888755 233444444555556655 89999999999999
Q ss_pred CCCCCCCC----------eeEEecCCchhhhhhh
Q psy12972 567 HSGNDVNT----------WLYPVDLGDKFRLVLA 590 (1578)
Q Consensus 567 HPGNilv~----------~v~liDfG~~~~l~l~ 590 (1578)
||.|+|++ .+++||||..-.+.|.
T Consensus 821 KPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lf 854 (974)
T KOG1166|consen 821 KPDNFLLRREICADSDSKGLYLIDFGRSIDMKLF 854 (974)
T ss_pred CcceeEeecccCCCCcccceEEEecccceeeeEc
Confidence 99999966 3899999987666665
|
|
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.1e-08 Score=119.11 Aligned_cols=136 Identities=14% Similarity=0.110 Sum_probs=86.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +++.||||+...... .. .. ....|..|.
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~--------------------------~~------~~~~~~~e~ 52 (332)
T cd05623 7 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM--LK--------------------------RA------ETACFREER 52 (332)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHH--HH--------------------------hh------HHHHHHHHH
Confidence 57999999999999976 688999998742100 00 00 001123333
Q ss_pred HHHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
..+..+ +++. ++.++. ......+|||||++|.+|.++..-....++...+...+.++. +..+|..|++|
T Consensus 53 ~~l~~~-----~~~~--i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiH 125 (332)
T cd05623 53 DVLVNG-----DNQW--ITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVH 125 (332)
T ss_pred HHHhhC-----CCCC--EeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 333222 2222 223322 223456899999999999887542233455554444444444 67899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|.|||+. .++++|||...
T Consensus 126 rDlkp~Nili~~~~~~kL~DfG~a~ 150 (332)
T cd05623 126 RDIKPDNILMDMNGHIRLADFGSCL 150 (332)
T ss_pred cCCCHHHEEECCCCCEEEeecchhe
Confidence 99999999975 58999999754
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=98.75 E-value=4.6e-08 Score=112.46 Aligned_cols=135 Identities=16% Similarity=0.143 Sum_probs=92.5
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+.+++..||+|....+-. .+-+|.+|++
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~--------------------------------------~~~~~~~e~~ 51 (256)
T cd05114 10 KELGSGQFGVVHLGKWRAQIKVAIKAINEGAM--------------------------------------SEEDFIEEAK 51 (256)
T ss_pred eEecCCcCceEEEEEeccCceEEEEecccCCc--------------------------------------cHHHHHHHHH
Confidence 56999999999999999988999997643210 0124556666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
-++++. +..-+.+...+ +.....++||||++|.+|.+........++...+...+.++. +..+|..|++|+|+
T Consensus 52 ~l~~l~----h~~i~~~~~~~-~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl 126 (256)
T cd05114 52 VMMKLS----HPKLVQLYGVC-TQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDL 126 (256)
T ss_pred HHHHCC----CCCceeEEEEE-ccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence 666653 22223333333 233456899999999999876432222355555555544444 67899999999999
Q ss_pred CCCCCCCC---eeEEecCCchhh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+||++. .+++.|||....
T Consensus 127 ~p~ni~i~~~~~~kl~d~g~~~~ 149 (256)
T cd05114 127 AARNCLVSSTGVVKVSDFGMTRY 149 (256)
T ss_pred CcceEEEcCCCeEEECCCCCccc
Confidence 99999965 488999997643
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd02952 TRP14_like Human TRX-related protein 14 (TRP14)-like family; composed of proteins similar to TRP14, a 14kD cytosolic protein that shows disulfide reductase activity in vitro with a different substrate specificity compared with another human cytosolic protein, TRX1 | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.3e-08 Score=103.18 Aligned_cols=81 Identities=19% Similarity=0.363 Sum_probs=67.4
Q ss_pred cccccceecccCCCCcEEEEEEc-------CCCcccccccHHHHHHHHHhCCCceEEEEEECcc-------chhhHhHcC
Q psy12972 860 HWNFEKNYIPKSYTTPHLILFYS-------DWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-------EQGLARRLG 925 (1578)
Q Consensus 860 ~~nF~~~vl~~s~~~~~LV~Fya-------pwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~-------~~~L~~k~g 925 (1578)
.++|.+.+.. ..+++++|.||| +||++|+.+.|.+++++..+.+. +.|++||++. +.+++.+++
T Consensus 9 ~~~f~~~i~~-~~~~~vvV~F~A~~~~~~~~WC~pCr~~~P~l~~l~~~~~~~-v~fv~Vdvd~~~~w~d~~~~~~~~~~ 86 (119)
T cd02952 9 YEEFLKLLKS-HEGKPIFILFYGDKDPDGQSWCPDCVKAEPVVREALKAAPED-CVFIYCDVGDRPYWRDPNNPFRTDPK 86 (119)
T ss_pred HHHHHHHHHh-cCCCeEEEEEEccCCCCCCCCCHhHHhhchhHHHHHHHCCCC-CEEEEEEcCCcccccCcchhhHhccC
Confidence 3556665543 236799999999 99999999999999999999754 8999999976 458999999
Q ss_pred cc-ccCCcEEEEcCCcccc
Q psy12972 926 VG-SQLPQIALLTDGRTSF 943 (1578)
Q Consensus 926 V~-~~~PTl~lf~~G~~~~ 943 (1578)
|. + .||+++|++|+...
T Consensus 87 I~~~-iPT~~~~~~~~~l~ 104 (119)
T cd02952 87 LTTG-VPTLLRWKTPQRLV 104 (119)
T ss_pred cccC-CCEEEEEcCCceec
Confidence 98 8 99999998876544
|
TRP14 catalyzes the reduction of small disulfide-containing peptides but does not reduce disulfides of ribonucleotide reductase, peroxiredoxin and methionine sulfoxide reductase, which are TRX1 substrates. TRP14 also plays a role in tumor necrosis factor (TNF)-alpha signaling pathways, distinct from that of TRX1. Its depletion promoted TNF-alpha induced activation of c-Jun N-terminal kinase and mitogen-activated protein kinases. |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.75 E-value=5e-08 Score=111.59 Aligned_cols=136 Identities=18% Similarity=0.185 Sum_probs=91.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|...+|+.||||+....... + ..-.|.+|.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~------------------------------~------~~~~~~~e~~ 44 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP------------------------------D------LKRKFLQEAE 44 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH------------------------------H------HHHHHHHHHH
Confidence 468999999999999877999999976532211 0 0112345555
Q ss_pred HHHHHHHhhCCCCCe-eecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYV-YIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v-~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.++++ . ++.+ .+-..+ .-....++||||++|.++.+...-.....+...+...+.++. +..+|..|++|+|
T Consensus 45 ~l~~l----~-~~~i~~~~~~~-~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d 118 (251)
T cd05041 45 ILKQY----D-HPNIVKLIGVC-VQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRD 118 (251)
T ss_pred HHHhC----C-CCCeEEEEEEE-ecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhh
Confidence 44443 2 2322 222222 234567899999999999876432233456555555555544 6789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||++. .++++|||....
T Consensus 119 i~p~nili~~~~~~~l~d~g~~~~ 142 (251)
T cd05041 119 LAARNCLVGENNVLKISDFGMSRE 142 (251)
T ss_pred cCcceEEEcCCCcEEEeecccccc
Confidence 999999975 599999997643
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.2e-08 Score=118.54 Aligned_cols=92 Identities=34% Similarity=0.623 Sum_probs=76.4
Q ss_pred hhhhHHHHHHhhhhhhh-----hccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC------hhHHHHHHHHH
Q psy12972 615 FNLIMLWYTFLLNVLFI-----NCAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND------PTAQEKFLQLT 683 (1578)
Q Consensus 615 ~~l~~lw~~~~l~~~~~-----~~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~------~~a~~~f~~i~ 683 (1578)
.-.+..|.++.+...-+ ..-...|||+|||++.+++..+||++||+|+.++||||.+. ..-++.+.+|+
T Consensus 71 If~ivgWl~i~~L~~~I~~~k~~~~~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~It 150 (610)
T COG5407 71 IFTIVGWLVISYLISNIRTLKIEYRRGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTIT 150 (610)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHH
Confidence 33456787666444322 23445799999999999999999999999999999999764 34678899999
Q ss_pred HHHHHcCCHHHHHhccccCCCCC
Q psy12972 684 EAYNILSDAERRKQYDLFGTTDG 706 (1578)
Q Consensus 684 ~Ay~~L~d~~~R~~yD~~~~~~~ 706 (1578)
+||+.|+|...|..|-.+|+.++
T Consensus 151 kAY~~lTd~k~renyl~yGtPd~ 173 (610)
T COG5407 151 KAYGLLTDKKRRENYLNYGTPDS 173 (610)
T ss_pred HHHHhhhhHHHHHHHHhcCCCCC
Confidence 99999999999999999999875
|
|
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.75 E-value=4.6e-08 Score=111.87 Aligned_cols=138 Identities=22% Similarity=0.244 Sum_probs=95.4
Q ss_pred cccccccceEEEEEEecC----CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTKE----GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~----G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|...+ +..||||+.++..... ..-++.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~------------------------------------~~~~~~ 44 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE------------------------------------ERKDFL 44 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh------------------------------------HHHHHH
Confidence 468999999999999763 8899999987653221 011234
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh--------hcCCCHHHHHHHHHHHH--HH
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL--------EKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~--------~~~~~~~~v~~~l~~~~--l~ 554 (1578)
.|++.+.++. +...+.+-..+.+ ...-.|+|||++|.+|.+...-. ...++...+...+.+++ +.
T Consensus 45 ~e~~~l~~~~----~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~ 119 (262)
T cd00192 45 KEARVMKKLG----HPNVVRLLGVCTE-EEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGME 119 (262)
T ss_pred HHHHHHhhcC----CCChheeeeeecC-CCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHH
Confidence 5555555553 2222222222222 34567999999999999875432 24567777766666655 78
Q ss_pred HHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
.+|..|++|+|++|.||++. .+++.|||....+
T Consensus 120 ~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 155 (262)
T cd00192 120 YLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDV 155 (262)
T ss_pred HHHcCCcccCccCcceEEECCCCcEEEccccccccc
Confidence 89999999999999999965 4899999976543
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.5e-08 Score=112.78 Aligned_cols=150 Identities=16% Similarity=0.076 Sum_probs=94.1
Q ss_pred ccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHH
Q psy12972 403 FRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQEL 481 (1578)
Q Consensus 403 F~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 481 (1578)
|.++..++||.|++|+||+|... +|+.||||..+.........+ ....+..+
T Consensus 1 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~---------------------~~~~~~~~------ 53 (272)
T cd06629 1 FKWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHD---------------------SRQKDMVK------ 53 (272)
T ss_pred CceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccc---------------------hHHHHHHH------
Confidence 45667789999999999999864 799999997753322110000 00000011
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 482 DFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 482 Df~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
.+..|+..+.++. +...+.+.... +.....+|||||++|.+|.+...- ...++...+...+.+++ +..+|..
T Consensus 54 ~~~~e~~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~ 127 (272)
T cd06629 54 ALRSEIETLKDLD----HLNIVQYLGFE-TTEEYLSIFLEYVPGGSIGSCLRT-YGRFEEQLVRFFTEQVLEGLAYLHSK 127 (272)
T ss_pred HHHHHHHHHHhcC----CCCcceEEEEe-ccCCceEEEEecCCCCcHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 2345555555442 22222332222 223456899999999999876431 13355444444433333 6789999
Q ss_pred CccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 560 GFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 560 G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|+|++|+||++. .+++.|||...
T Consensus 128 ~i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 128 GILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred CeeecCCChhhEEEcCCCeEEEeeccccc
Confidence 999999999999965 58999999753
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.9e-08 Score=114.58 Aligned_cols=138 Identities=15% Similarity=0.069 Sum_probs=93.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|... +|+.||||+........ -..+..+.+|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----------------------------------~~~~~~~~~E~ 51 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK----------------------------------RKGEAMALNEK 51 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhh----------------------------------hhhHHHHHHHH
Confidence 56899999999999964 79999999875422110 01123345666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +...+.+...+. .....+|||||++|..|.+..... ...++...+...+.+++ +..+|..|++|+
T Consensus 52 ~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~ 126 (285)
T cd05605 52 QILEKVN----SRFVVSLAYAYE-TKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYR 126 (285)
T ss_pred HHHHhcC----CCCEeeeeeeec-CCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEec
Confidence 6665553 222233333322 223468999999999998764322 23466666666555555 678999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.||+++ .++++|||...
T Consensus 127 dlkp~Nil~~~~~~~~l~Dfg~~~ 150 (285)
T cd05605 127 DLKPENILLDDYGHIRISDLGLAV 150 (285)
T ss_pred CCCHHHEEECCCCCEEEeeCCCce
Confidence 9999999975 48999999764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.9e-08 Score=116.65 Aligned_cols=137 Identities=16% Similarity=0.065 Sum_probs=87.2
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|.||+|+.. +|+.||||+.++..... ..+ . -.+..|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~--------------------------~-------~~~~~e~~ 47 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM-DDD--------------------------V-------ECTMVEKR 47 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-cch--------------------------H-------HHHHHHHH
Confidence 5899999999999975 68999999987653210 000 0 01122332
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.. .+.+...+.+-..+. ....-+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|+
T Consensus 48 ~l~~---~~~hp~iv~~~~~~~-~~~~~~lv~ey~~~g~L~~~l~-~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdi 122 (316)
T cd05619 48 VLSL---AWEHPFLTHLYCTFQ-TKENLFFVMEYLNGGDLMFHIQ-SCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDL 122 (316)
T ss_pred HHHh---ccCCCcCcceEEEEE-eCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCC
Confidence 2222 122222222222222 2234579999999999977632 223456655555544544 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|.|||+. .++++|||...
T Consensus 123 kp~Nil~~~~~~~kl~Dfg~~~ 144 (316)
T cd05619 123 KLDNILLDTDGHIKIADFGMCK 144 (316)
T ss_pred CHHHEEECCCCCEEEccCCcce
Confidence 99999975 48999999754
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=98.74 E-value=5.6e-08 Score=113.60 Aligned_cols=137 Identities=15% Similarity=0.069 Sum_probs=87.3
Q ss_pred cccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 411 lasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
||.|++|+||+|+.+ +|+.||+|+........ . ..+-.+..|...
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~---~-------------------------------~~~~~~~~E~~i 46 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK---K-------------------------------SGEKMALLEKEI 46 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc---c-------------------------------hhhHHHHHHHHH
Confidence 689999999999965 79999999874321100 0 000111234444
Q ss_pred HHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH-hhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 490 AERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL-LEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 490 ~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l-~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
+.++. +...+.+-..+ +.....+|||||++|.+|.+.... ...+++...+...+.+++ +..+|..|++|+|+
T Consensus 47 l~~l~----hp~i~~~~~~~-~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~di 121 (277)
T cd05607 47 LEKVN----SPFIVNLAYAF-ESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDM 121 (277)
T ss_pred HHhcC----CCcEEEEEEEE-ecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccC
Confidence 44432 22222222222 223456899999999999765422 123466665555444444 67899999999999
Q ss_pred CCCCCCCC---eeEEecCCchhh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~~ 586 (1578)
+|.||+++ .++++|||....
T Consensus 122 kp~Nili~~~~~~~l~Dfg~~~~ 144 (277)
T cd05607 122 KPENVLLDDQGNCRLSDLGLAVE 144 (277)
T ss_pred ChHhEEEcCCCCEEEeeceeeee
Confidence 99999975 489999997543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.2e-08 Score=116.01 Aligned_cols=140 Identities=19% Similarity=0.198 Sum_probs=88.0
Q ss_pred cccccccceEEEEEEec--CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK--EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
+.||.|++|.||+|+.. +|+.||||+.+...... . ....+.+|
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~--------------------~---------------~~~~~~~e 51 (290)
T cd07862 7 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE--------------------G---------------MPLSTIRE 51 (290)
T ss_pred eEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC--------------------C---------------chHHHHHH
Confidence 56999999999999863 57899999876432110 0 00112334
Q ss_pred HHHHHHHHHhhCCCCCeeecEEee----CCCCceEEEEeccCCCcCCchhhH-hhcCCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILW----DKSSTRVLTTEFIDGVKISDKEGL-LEKGFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~----~~~t~~VLVME~i~G~~l~d~~~l-~~~~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
...+.++.. +.+..-+.+-.++. +..+.-+|||||++| .+.+.... ...+++...+...+.+++ +..+|..
T Consensus 52 ~~~l~~l~~-~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~ 129 (290)
T cd07862 52 VAVLRHLET-FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH 129 (290)
T ss_pred HHHHHhhcc-cCCCCcceEEEEEecccCCCCCcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 333333321 22322233333332 123446899999986 55554321 223466666666665555 7889999
Q ss_pred CccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 560 GFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 560 G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|+|++|.|||+. .++++|||...
T Consensus 130 ~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 130 RVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 999999999999965 58999999753
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=98.73 E-value=7.3e-08 Score=111.28 Aligned_cols=142 Identities=18% Similarity=0.149 Sum_probs=92.9
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|+||+|...+|+.||||+.......... . . ...-.+.+|+.
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~------------------------~-~------~~~~~~~~e~~ 54 (265)
T cd06631 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLA------------------------A-E------KEYEKLQEEVD 54 (265)
T ss_pred ceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhh------------------------H-H------HHHHHHHHHHH
Confidence 579999999999999889999999987543211000 0 0 00113455665
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.++++. +...+.+.....+ ....+++|||++|.+|.++.. ....++...+...+.++. +..+|..|++|+|+
T Consensus 55 ~l~~l~----~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl 128 (265)
T cd06631 55 LLKSLK----HVNIVQYLGTCLD-DNTISIFMEFVPGGSISSILN-RFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDI 128 (265)
T ss_pred HHHhcC----CCCEeeEeeEeec-CCeEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence 555553 2222233332222 245689999999999988743 223345555544444444 67889999999999
Q ss_pred CCCCCCCC---eeEEecCCchhhh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~~l 587 (1578)
+|.||++. .++++|||....+
T Consensus 129 ~p~nil~~~~~~~~l~dfg~~~~~ 152 (265)
T cd06631 129 KGNNVMLMPNGIIKLIDFGCARRL 152 (265)
T ss_pred CHHhEEECCCCeEEeccchhhHhh
Confidence 99999965 5899999976544
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.3e-08 Score=129.00 Aligned_cols=140 Identities=20% Similarity=0.171 Sum_probs=91.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+...... ... .-.|.+|+
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~----------------------------e~~------~~rflrEi 53 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSEN----------------------------PLL------KKRFLREA 53 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECcccccC----------------------------HHH------HHHHHHHH
Confidence 57999999999999965 79999999986543211 000 11245666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh----------hcCCCHHHHHHHHHHHH--HHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL----------EKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~----------~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
+.+.++. +..-+.+-.++. -....++||||++|.+|.++..-. ..+.+...+...+.++. +..
T Consensus 54 ~ILs~L~----HPNIVkl~~v~~-d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~y 128 (932)
T PRK13184 54 KIAADLI----HPGIVPVYSICS-DGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEY 128 (932)
T ss_pred HHHHhCC----CcCcCeEEEEEe-eCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHH
Confidence 6555543 322233333332 234568999999999998764311 11223333444444443 778
Q ss_pred HHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 556 IFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+|..|++|+|++|.|||++ .++++|||....+
T Consensus 129 LHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i 163 (932)
T PRK13184 129 VHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFK 163 (932)
T ss_pred HHHCCccccCCchheEEEcCCCCEEEEecCcceec
Confidence 9999999999999999965 5899999976543
|
|
| >KOG1164|consensus | Back alignment and domain information |
|---|
Probab=98.73 E-value=3e-08 Score=118.98 Aligned_cols=139 Identities=22% Similarity=0.237 Sum_probs=99.6
Q ss_pred CcccccccceEEEEEEecCC--CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 408 ENPIAAASLAQVFRAVTKEG--VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l~~G--~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
...||.|++|+||.+...+. ..+|+|+........- + . +..
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~------------------~-------------~------l~~ 65 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP------------------S-------------V------LKI 65 (322)
T ss_pred eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC------------------c-------------c------chh
Confidence 36899999999999996543 5899999865322110 0 0 122
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCC-CCc--eEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDK-SST--RVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~-~t~--~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
|...+..+.. ....-.+|.+++.. .+. +++||+.+ |.+|.|+..... ..++...+++..++++ ++.||..
T Consensus 66 E~~vl~~l~~---~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~ 141 (322)
T KOG1164|consen 66 EIQVLKKLEK---KNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK 141 (322)
T ss_pred HHHHHHHHhh---hcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc
Confidence 2223333322 12335678888766 233 68999999 999999764333 5678888888888877 8999999
Q ss_pred CccccCCCCCCCCCC--------eeEEecCCchhhh
Q psy12972 560 GFVHADPHSGNDVNT--------WLYPVDLGDKFRL 587 (1578)
Q Consensus 560 G~vH~DpHPGNilv~--------~v~liDfG~~~~l 587 (1578)
||+|||+||+|++++ .++++|||.+.+.
T Consensus 142 G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~ 177 (322)
T KOG1164|consen 142 GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRF 177 (322)
T ss_pred CcccCCcCHHHeeecCCCCcccceEEEEecCCCccc
Confidence 999999999999964 3899999998743
|
|
| >PRK00294 hscB co-chaperone HscB; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.3e-08 Score=109.69 Aligned_cols=67 Identities=28% Similarity=0.427 Sum_probs=58.9
Q ss_pred ccCCCccccccccc--CCHHHHHHHhhhhhhhcCCCCCCCh------hHHHHHHHHHHHHHHcCCHHHHHhcccc
Q psy12972 635 VSLDPYETLGVPRT--ASLQEIRKNYKRLVVEWHPDKNNDP------TAQEKFLQLTEAYNILSDAERRKQYDLF 701 (1578)
Q Consensus 635 ~~~d~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~------~a~~~f~~i~~Ay~~L~d~~~R~~yD~~ 701 (1578)
...|||++||+++. .+..+|+++||++++++|||+.... .+.+.+..||+||++|+||.+|+.|+..
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~ 76 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLA 76 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHH
Confidence 46799999999985 6789999999999999999997542 2556799999999999999999999953
|
|
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.2e-08 Score=118.51 Aligned_cols=138 Identities=17% Similarity=0.102 Sum_probs=87.1
Q ss_pred cccccccceEEEEEEe------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVT------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+. .+|+.||||+.+.+.... . .-+
T Consensus 13 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~---------------------------------~~~ 56 (343)
T cd05103 13 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS---E---------------------------------HRA 56 (343)
T ss_pred ccccCCccceEEEEeeccCCccccceeEEEEEeccCCChH---H---------------------------------HHH
Confidence 6799999999999973 468999999986543210 0 012
Q ss_pred HHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-------------------------
Q psy12972 483 FLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE------------------------- 536 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~------------------------- 536 (1578)
+.+|...+.++. +++. +.+-..+......-+|+|||++|.+|.++.....
T Consensus 57 ~~~E~~~l~~l~----~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (343)
T cd05103 57 LMSELKILIHIG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISE 132 (343)
T ss_pred HHHHHHHHHhcc----CCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhh
Confidence 344555555542 2222 2222222222234579999999999987643110
Q ss_pred -----------------------------------------cCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCC
Q psy12972 537 -----------------------------------------KGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVN 573 (1578)
Q Consensus 537 -----------------------------------------~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv 573 (1578)
..++...+...+.++. +..+|..|++|+|++|.|||+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~ 212 (343)
T cd05103 133 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILL 212 (343)
T ss_pred hhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEE
Confidence 1123333333444444 678899999999999999997
Q ss_pred C---eeEEecCCchhh
Q psy12972 574 T---WLYPVDLGDKFR 586 (1578)
Q Consensus 574 ~---~v~liDfG~~~~ 586 (1578)
. .++++|||....
T Consensus 213 ~~~~~~kl~dfg~~~~ 228 (343)
T cd05103 213 SENNVVKICDFGLARD 228 (343)
T ss_pred cCCCcEEEEecccccc
Confidence 5 589999997644
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=98.73 E-value=9e-08 Score=110.91 Aligned_cols=135 Identities=12% Similarity=0.106 Sum_probs=87.0
Q ss_pred cccccccceEEEEEEecC-------------CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKE-------------GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKV 475 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~-------------G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 475 (1578)
+.||.|++|+||+|++.+ +.+||||+..+.....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~--------------------------------- 47 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDI--------------------------------- 47 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhH---------------------------------
Confidence 358999999999998642 2369999876532210
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--H
Q psy12972 476 PLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--A 553 (1578)
Q Consensus 476 ~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l 553 (1578)
...|..|+..+..+ .+..-+.+..... -....+|+|||++|.++..........++...+...+.++. +
T Consensus 48 ----~~~~~~~~~~l~~l----~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l 118 (262)
T cd05077 48 ----SLAFFETASMMRQV----SHKHIVLLYGVCV-RDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASAL 118 (262)
T ss_pred ----HHHHHHHHHHHHhC----CCCCEeeEEEEEe-cCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 01134444444433 2322233333322 23457899999999998766432223456666555555555 7
Q ss_pred HHHHHcCccccCCCCCCCCCC----------eeEEecCCchh
Q psy12972 554 EQIFQTGFVHADPHSGNDVNT----------WLYPVDLGDKF 585 (1578)
Q Consensus 554 ~~i~~~G~vH~DpHPGNilv~----------~v~liDfG~~~ 585 (1578)
..+|..|++|+|++|.|||+. .+++.|||...
T Consensus 119 ~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~ 160 (262)
T cd05077 119 SYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPI 160 (262)
T ss_pred HHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCc
Confidence 788999999999999999974 17888999754
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >KOG0600|consensus | Back alignment and domain information |
|---|
Probab=98.72 E-value=4e-08 Score=117.36 Aligned_cols=146 Identities=22% Similarity=0.288 Sum_probs=94.1
Q ss_pred HhCCChhhhccccCCcccccccceEEEEEE-ecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHH
Q psy12972 394 DFGCTHSQLFRSFDENPIAAASLAQVFRAV-TKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINE 472 (1578)
Q Consensus 394 ~lG~~~~~iF~~fd~~PlasaSiaQVhrA~-l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e 472 (1578)
.++..-.+.|+.+ +-||.|.+||||+|+ +.+|+.||+|=.+=+..+. .
T Consensus 110 ~w~~r~~~~feki--~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~--------------------~--------- 158 (560)
T KOG0600|consen 110 GWGPRRADSFEKI--EKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKE--------------------G--------- 158 (560)
T ss_pred cccccchHHHHHH--HHhcCcchhheeEeeecccCcEEEEEEeecccCCC--------------------c---------
Confidence 4555566778877 459999999999999 5689999999665332110 0
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeC-CCCceEEEEeccCCCcCCchhhHhhc---CCCHHHHHHHH
Q psy12972 473 LKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWD-KSSTRVLTTEFIDGVKISDKEGLLEK---GFSLADVDRKL 548 (1578)
Q Consensus 473 ~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~-~~t~~VLVME~i~G~~l~d~~~l~~~---~~~~~~v~~~l 548 (1578)
+-..+ .+|..-++++. |...|..-.++.+ +++.-+||.||++- |+..+... .++..+|--.+
T Consensus 159 ~~~t~------~REI~ILr~l~----HpNIikL~eivt~~~~~siYlVFeYMdh----DL~GLl~~p~vkft~~qIKc~m 224 (560)
T KOG0600|consen 159 FPITA------IREIKILRRLD----HPNIIKLEEIVTSKLSGSIYLVFEYMDH----DLSGLLSSPGVKFTEPQIKCYM 224 (560)
T ss_pred chHHH------HHHHHHHHhcC----CCcccceeeEEEecCCceEEEEEecccc----hhhhhhcCCCcccChHHHHHHH
Confidence 00111 23333444432 2223333343332 35667899999963 33333322 45667777666
Q ss_pred HHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCch
Q psy12972 549 FTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 549 ~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
.+++ ++.+|..|++|||+|..|||+. .+++-|||++
T Consensus 225 kQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLA 265 (560)
T KOG0600|consen 225 KQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLA 265 (560)
T ss_pred HHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccce
Confidence 6666 8899999999999999999954 4666677754
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.6e-08 Score=111.70 Aligned_cols=135 Identities=11% Similarity=0.162 Sum_probs=86.5
Q ss_pred CCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 407 DENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 407 d~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
+.++||+||++.||. ...++.. +|||.+++-.. .+-++++|
T Consensus 6 ~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~-------------------------------------~~~~~~rE 46 (210)
T PRK10345 6 EQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDG-------------------------------------GDKEIRRE 46 (210)
T ss_pred CcceecCCCceEEEE-CCCCcCe-EEEEEeccccc-------------------------------------hHHHHHHH
Confidence 347999999999995 3346666 69998764210 00124566
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCce---E---EEEec--cCCCcCCchhhHhhcCCCHH-HHHHHHHHHHHHHHH
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTR---V---LTTEF--IDGVKISDKEGLLEKGFSLA-DVDRKLFTAFAEQIF 557 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~---V---LVME~--i~G~~l~d~~~l~~~~~~~~-~v~~~l~~~~l~~i~ 557 (1578)
.+-+.++.+.-.. .-.||++|..+.|.. . +|||| ..|.+|.++. .+..++.. .....++..+.+.+|
T Consensus 47 i~~l~~L~~~~~~--h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l--~~~~~~e~~~~~~~~L~~l~~yLh 122 (210)
T PRK10345 47 LKYYAHLSRRLID--WSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFA--EQCRYEEDVAQLRQLLKKLKRYLL 122 (210)
T ss_pred HHHHHHhhccCCC--CcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHH--HcccccHhHHHHHHHHHHHHHHHH
Confidence 6666666432112 234677765554442 2 78999 4467888764 33333332 234455556678999
Q ss_pred HcCccccCCCCCCCCCC-------eeEEecCCch
Q psy12972 558 QTGFVHADPHSGNDVNT-------WLYPVDLGDK 584 (1578)
Q Consensus 558 ~~G~vH~DpHPGNilv~-------~v~liDfG~~ 584 (1578)
.+|++|+|++|.|||++ .++++|+++.
T Consensus 123 ~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 123 DNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred HCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 99999999999999974 4888885544
|
|
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=98.72 E-value=5e-08 Score=111.85 Aligned_cols=136 Identities=20% Similarity=0.239 Sum_probs=96.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||+|++|.||+|+.. +|+.||+|+....-...-. . .....|+
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~-----------------------------~------~~~~~e~ 49 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEE-----------------------------R------EENIREI 49 (260)
T ss_dssp EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHH-----------------------------H------HHHHHHH
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccc-----------------------------c------chhhhhh
Confidence 57999999999999976 6789999998764322100 0 0012266
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+++++ +..-+.+-.++.. ...-+++|||++|.++.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 50 ~~~~~l~----~~~i~~~~~~~~~-~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~d 123 (260)
T PF00069_consen 50 KILRRLR----HPNIVQILDVFQD-DNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGIVHRD 123 (260)
T ss_dssp HHHHHHT----BTTBCHEEEEEEE-SSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESS
T ss_pred hcccccc----ccccccccccccc-ccccccccccccccccccccc-ccccccccccccccccccccccccccccccccc
Confidence 6666663 2222333333322 455679999999998887644 356677777777666666 8899999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 124 ikp~NIl~~~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 124 IKPENILLDENGEVKLIDFGSSV 146 (260)
T ss_dssp BSGGGEEESTTSEEEESSGTTTE
T ss_pred ccccccccccccccccccccccc
Confidence 999999965 58999999764
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.72 E-value=6.3e-08 Score=112.02 Aligned_cols=138 Identities=20% Similarity=0.237 Sum_probs=93.8
Q ss_pred cccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+.+ +...||||+.+++..... .-+|.
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~------------------------------------~~~~~ 53 (266)
T cd05033 10 KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQ------------------------------------RLDFL 53 (266)
T ss_pred eEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHH------------------------------------HHHHH
Confidence 67999999999999975 246899998875432110 11344
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
.|...+.++. +...+.+...+. .....+++|||++|.+|.++.......++...+...+.+++ +..+|..|++
T Consensus 54 ~e~~~l~~l~----h~~i~~~~~~~~-~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~ 128 (266)
T cd05033 54 TEASIMGQFD----HPNIIRLEGVVT-KSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYV 128 (266)
T ss_pred HHHHHHHhCC----CCCcceEeEEEe-cCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 5555555442 222233333332 23456899999999999887543333466666666665555 6889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|+|++|.||+++ .++++|||....+
T Consensus 129 H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 129 HRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred cCCCCcceEEEcCCCCEEECccchhhcc
Confidence 999999999975 4899999976544
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=98.72 E-value=5.5e-08 Score=112.53 Aligned_cols=138 Identities=20% Similarity=0.206 Sum_probs=92.4
Q ss_pred CcccccccceEEEEEEec-CCC---EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 408 ENPIAAASLAQVFRAVTK-EGV---EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l~-~G~---~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
.+.||.|++|+||+|+++ +|+ .||||+.+++..... .-+|
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~------------------------------------~~~~ 53 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQ------------------------------------RQDF 53 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHH------------------------------------HHHH
Confidence 367999999999999975 443 799998765432110 0123
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
.+|++.+.++ .+...+.+...+.. ....+|||||++|.+|.+........++...+...+.+++ +..+|..|+
T Consensus 54 ~~e~~~l~~l----~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i 128 (268)
T cd05063 54 LSEASIMGQF----SHHNIIRLEGVVTK-FKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNY 128 (268)
T ss_pred HHHHHHHhcC----CCCCeeEEEEEEcc-CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 4555544443 23333333333332 2456899999999999877432223456666665555544 688999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|+||.||+++ .+++.|||....
T Consensus 129 ~H~dlkp~Nili~~~~~~kl~dfg~~~~ 156 (268)
T cd05063 129 VHRDLAARNILVNSNLECKVSDFGLSRV 156 (268)
T ss_pred eccccchhhEEEcCCCcEEECCCcccee
Confidence 9999999999975 488999997643
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >KOG0198|consensus | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.4e-08 Score=115.22 Aligned_cols=136 Identities=22% Similarity=0.164 Sum_probs=85.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-||.||+|.||.|..+ +|+..|||...-. + .. . .+.+ .+|.
T Consensus 23 ~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~-------~------------------~~-~-----~~~l------~~Ei 65 (313)
T KOG0198|consen 23 KLLGRGSFGSVYLATNKKTGELMAVKSVELE-------D------------------SP-T-----SESL------EREI 65 (313)
T ss_pred ccccCccceEEEEEEecCCCcceeeeeeecc-------c------------------ch-h-----HHHH------HHHH
Confidence 56899999999999976 5999999964211 0 00 0 1112 3334
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC----ceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS----TRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t----~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+-+.++. ++.| -+.+....+ .--|.|||+.|.+|.+...-...+++...+.....++. +..||.+||
T Consensus 66 ~iL~~l~-----~p~I--V~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~ 138 (313)
T KOG0198|consen 66 RILSRLN-----HPNI--VQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGI 138 (313)
T ss_pred HHHHhCC-----CCCE--EeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 4444433 1211 111211111 23589999999999998432211355444444333433 888999999
Q ss_pred cccCCCCCCCCC----CeeEEecCCchhhhh
Q psy12972 562 VHADPHSGNDVN----TWLYPVDLGDKFRLV 588 (1578)
Q Consensus 562 vH~DpHPGNilv----~~v~liDfG~~~~l~ 588 (1578)
+|||+||.|||+ +.+++.|||...+..
T Consensus 139 vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~ 169 (313)
T KOG0198|consen 139 VHCDIKPANILLDPSNGDVKLADFGLAKKLE 169 (313)
T ss_pred eccCcccceEEEeCCCCeEEeccCccccccc
Confidence 999999999996 358999999766554
|
|
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=98.72 E-value=5.3e-08 Score=113.69 Aligned_cols=71 Identities=13% Similarity=0.037 Sum_probs=54.2
Q ss_pred CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC----------eeEEecC
Q psy12972 514 STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT----------WLYPVDL 581 (1578)
Q Consensus 514 t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~----------~v~liDf 581 (1578)
...+|||||++|.++.++.......++...+...+.++. ++.+|..|++|+|++|.|||+. .+++.||
T Consensus 89 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~ 168 (274)
T cd05076 89 SENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDP 168 (274)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCC
Confidence 467899999999999776433334466666665555555 7889999999999999999964 2678888
Q ss_pred Cch
Q psy12972 582 GDK 584 (1578)
Q Consensus 582 G~~ 584 (1578)
|..
T Consensus 169 g~~ 171 (274)
T cd05076 169 GVS 171 (274)
T ss_pred ccc
Confidence 865
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=98.72 E-value=4e-08 Score=128.96 Aligned_cols=137 Identities=15% Similarity=0.119 Sum_probs=88.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+..-.. + ..... .+..|.
T Consensus 10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~----~------------------------~~~~~------~~~~E~ 55 (669)
T cd05610 10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI----N------------------------KNMVH------QVQAER 55 (669)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc----C------------------------HHHHH------HHHHHH
Confidence 67999999999999976 7999999998632100 0 00001 123333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+..+ .+...+.+-..+ ......+|||||++|..|.++... ...++...+...+.+++ +..+|..|++|+|
T Consensus 56 ~~l~~l----~hp~Iv~~~~~~-~~~~~~~lVmEy~~g~~L~~li~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrD 129 (669)
T cd05610 56 DALALS----KSPFIVHLYYSL-QSANNVYLVMEYLIGGDVKSLLHI-YGYFDEEMAVKYISEVALALDYLHRHGIIHRD 129 (669)
T ss_pred HHHHhc----CCCCcCeEEEEE-EECCEEEEEEeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCC
Confidence 333332 222222222222 223456899999999999887432 22345554544444444 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 130 LKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 130 LKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred ccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999974 58999999763
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=98.71 E-value=6.2e-08 Score=112.02 Aligned_cols=136 Identities=16% Similarity=0.166 Sum_probs=91.4
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.+....... ..+.+|+
T Consensus 15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~-------------------------------------~~~~~e~ 57 (267)
T cd06646 15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDF-------------------------------------SLIQQEI 57 (267)
T ss_pred heeecCCCeEEEEEEECCCCeEEEEEEEecCccchH-------------------------------------HHHHHHH
Confidence 6789999999999996 5899999999864321110 0134455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++. +..-+.+...+. .....++||||++|.+|.++.. ....++...+...+.++. +..+|..|++|+|
T Consensus 58 ~~l~~~~----h~~ii~~~~~~~-~~~~~~iv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d 131 (267)
T cd06646 58 FMVKECK----HCNIVAYFGSYL-SREKLWICMEYCGGGSLQDIYH-VTGPLSELQIAYVCRETLQGLAYLHSKGKMHRD 131 (267)
T ss_pred HHHHhcC----CCCeeeeeEEEE-eCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 5554432 222222222221 2245679999999999987642 233456555555544444 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|+||++. .++++|||...++
T Consensus 132 l~p~nill~~~~~~~l~dfg~~~~~ 156 (267)
T cd06646 132 IKGANILLTDNGDVKLADFGVAAKI 156 (267)
T ss_pred CCHHHEEECCCCCEEECcCccceee
Confidence 999999975 4899999987544
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.71 E-value=6.2e-08 Score=111.53 Aligned_cols=132 Identities=15% Similarity=0.102 Sum_probs=91.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+++.||||+..++... .-++..|..
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~--------------------------------------~~~~~~e~~ 53 (261)
T cd05034 12 RKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMS--------------------------------------PEAFLQEAQ 53 (261)
T ss_pred eeeccCcceEEEEEEEcCCceEEEEEecCCccC--------------------------------------HHHHHHHHH
Confidence 679999999999999888899999987653210 012345555
Q ss_pred HHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
.++++. + + .+++++.. .....+++|||++|.+|.+...-. ...++...+...+.+++ +..+|..|++|
T Consensus 54 ~l~~l~----h-~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h 126 (261)
T cd05034 54 IMKKLR----H-D--KLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIH 126 (261)
T ss_pred HHhhCC----C-C--CEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 555543 2 2 23333322 224578999999999998764321 12355665555554444 67889999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|.||+++ .++++|||...
T Consensus 127 ~di~p~nili~~~~~~~l~d~g~~~ 151 (261)
T cd05034 127 RDLAARNILVGENLVCKIADFGLAR 151 (261)
T ss_pred CCcchheEEEcCCCCEEECccccce
Confidence 99999999975 58899999754
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.5e-08 Score=110.86 Aligned_cols=141 Identities=17% Similarity=0.137 Sum_probs=91.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|... +|++||||+.+...... + . ..+-.++.+|+
T Consensus 8 ~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~---~----------------------~-------~~~~~~~~~e~ 55 (263)
T cd06625 8 KLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSP---E----------------------T-------KKEVNALECEI 55 (263)
T ss_pred ceecCCCceEEEEEEEcCCCcEEEEEEEeecccch---h----------------------h-------HHHHHHHHHHH
Confidence 68999999999999864 79999999876432110 0 0 00002346666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+...+ .......+||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 56 ~~l~~l~----~~~i~~~~~~~-~~~~~~~~v~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~d 129 (263)
T cd06625 56 QLLKNLQ----HERIVQYYGCL-RDDETLSIFMEYMPGGSVKDQLK-AYGALTETVTRKYTRQILEGVEYLHSNMIVHRD 129 (263)
T ss_pred HHHHhCC----CCCeeeeEEEE-ccCCeEEEEEEECCCCcHHHHHH-HhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 6665543 22223332332 23345679999999999987643 122344444443333333 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|+||++. .++++|||...++
T Consensus 130 l~p~nilv~~~~~~~l~dfg~~~~~ 154 (263)
T cd06625 130 IKGANILRDSAGNVKLGDFGASKRL 154 (263)
T ss_pred CCHHHEEEcCCCCEEEeecccceec
Confidence 999999965 5899999976543
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >KOG0578|consensus | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.5e-08 Score=121.05 Aligned_cols=139 Identities=17% Similarity=0.209 Sum_probs=91.0
Q ss_pred CChhhhccccCCcccccccceEEEEEE-ecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHH
Q psy12972 397 CTHSQLFRSFDENPIAAASLAQVFRAV-TKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKV 475 (1578)
Q Consensus 397 ~~~~~iF~~fd~~PlasaSiaQVhrA~-l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 475 (1578)
.++...|..| +-||.|+-|-||.|+ ..+++.||||... ++.+-+.++ +++
T Consensus 269 ~dP~~~y~~~--~kigqgaSG~vy~A~~~~~~~~VaiK~m~--l~~Q~~keL---------------------iln---- 319 (550)
T KOG0578|consen 269 GDPRSKYTDF--KKIGQGATGGVYVARKISTKQEVAIKRMD--LRKQPKKEL---------------------LLN---- 319 (550)
T ss_pred CChhhhhcch--hhhccccccceeeeeeccCCceEEEEEEE--eccCCchhh---------------------hHH----
Confidence 3456666766 559999999999998 4589999999752 222212221 111
Q ss_pred HHHHHHhHHH--HHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH-
Q psy12972 476 PLEQELDFLN--EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF- 552 (1578)
Q Consensus 476 ~l~~ElDf~~--Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~- 552 (1578)
|+.-.+ .-.|+.+|-+.+- ...+-+.||||++|..|+|+. ....++...++..+-+++
T Consensus 320 ----Ei~Vm~~~~H~NiVnfl~Syl-------------v~deLWVVMEym~ggsLTDvV--t~~~~~E~qIA~Icre~l~ 380 (550)
T KOG0578|consen 320 ----EILVMRDLHHPNIVNFLDSYL-------------VGDELWVVMEYMEGGSLTDVV--TKTRMTEGQIAAICREILQ 380 (550)
T ss_pred ----HHHHHHhccchHHHHHHHHhc-------------ccceeEEEEeecCCCchhhhh--hcccccHHHHHHHHHHHHH
Confidence 111111 1234444433321 114456899999999999984 345567777777766666
Q ss_pred -HHHHHHcCccccCCCCCCCCCC---eeEEecCCc
Q psy12972 553 -AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGD 583 (1578)
Q Consensus 553 -l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~ 583 (1578)
++.+|..|++|+|++..|||.+ .+++.|||-
T Consensus 381 aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGF 415 (550)
T KOG0578|consen 381 GLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGF 415 (550)
T ss_pred HHHHHHhcceeeeccccceeEeccCCcEEEeeeee
Confidence 8899999999999999999944 355555553
|
|
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=98.70 E-value=9e-08 Score=115.22 Aligned_cols=136 Identities=13% Similarity=0.153 Sum_probs=90.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||+|+.+....... .-++.+|+
T Consensus 11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~------------------------------------~~~~~~E~ 54 (333)
T cd06650 11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAI------------------------------------RNQIIREL 54 (333)
T ss_pred ccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHH------------------------------------HHHHHHHH
Confidence 56899999999999976 789999998765432110 11245566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~vH~ 564 (1578)
+.+.++. +..-+.+...+.+ ....+|||||++|.+|.++... ...++...+...+.++. +..+|. .|++|+
T Consensus 55 ~~l~~l~----h~~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~ 128 (333)
T cd06650 55 QVLHECN----SPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 128 (333)
T ss_pred HHHHHCC----CCcccceeEEEEE-CCEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEec
Confidence 6666553 2223333344433 3457899999999999887431 22344444444444443 566775 589999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.|||+. .++++|||....
T Consensus 129 dlkp~Nili~~~~~~kL~Dfg~~~~ 153 (333)
T cd06650 129 DVKPSNILVNSRGEIKLCDFGVSGQ 153 (333)
T ss_pred CCChhhEEEcCCCCEEEeeCCcchh
Confidence 9999999975 489999997644
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=98.70 E-value=7.2e-08 Score=110.84 Aligned_cols=134 Identities=18% Similarity=0.139 Sum_probs=91.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|+||+|.. .|+.||+|+.+.+.. .-+|.+|+.
T Consensus 12 ~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~~---------------------------------------~~~~~~e~~ 51 (256)
T cd05082 12 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDAT---------------------------------------AQAFLAEAS 51 (256)
T ss_pred eeecccCCCeEEEEEE-cCCcEEEEEeCCCch---------------------------------------HHHHHHHHH
Confidence 5699999999999976 488999998642210 012456666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhc-CCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEK-GFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~-~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++. +...+.+...+.+..+..+++|||++|.+|.+....... .++...+...+.+++ +..+|..|++|+|
T Consensus 52 ~l~~l~----~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 127 (256)
T cd05082 52 VMTQLR----HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRD 127 (256)
T ss_pred HHHhCC----CCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccc
Confidence 666543 333333333333333456899999999999886432111 245555555555544 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+||+++ .++++|||....
T Consensus 128 lkp~nil~~~~~~~kl~dfg~~~~ 151 (256)
T cd05082 128 LAARNVLVSEDNVAKVSDFGLTKE 151 (256)
T ss_pred cchheEEEcCCCcEEecCCcccee
Confidence 999999964 589999997643
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >PRK03578 hscB co-chaperone HscB; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.7e-08 Score=109.42 Aligned_cols=66 Identities=24% Similarity=0.402 Sum_probs=56.9
Q ss_pred ccCCCccccccccc--CCHHHHHHHhhhhhhhcCCCCCCC-hhH-----HHHHHHHHHHHHHcCCHHHHHhccc
Q psy12972 635 VSLDPYETLGVPRT--ASLQEIRKNYKRLVVEWHPDKNND-PTA-----QEKFLQLTEAYNILSDAERRKQYDL 700 (1578)
Q Consensus 635 ~~~d~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~-~~a-----~~~f~~i~~Ay~~L~d~~~R~~yD~ 700 (1578)
...|||++|||++. ++..+|+++||++++++|||+.+. +.+ .+.+..||+||++|+||.+|..|+.
T Consensus 4 ~~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll 77 (176)
T PRK03578 4 LKDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLL 77 (176)
T ss_pred CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHH
Confidence 45799999999984 689999999999999999999863 332 3346899999999999999999995
|
|
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=98.70 E-value=9.2e-08 Score=110.33 Aligned_cols=133 Identities=16% Similarity=0.096 Sum_probs=90.6
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
..||.|++|+||+|+..++..||+|+.+++-.. +-+|.+|.+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~--------------------------------------~~~~~~E~~ 53 (260)
T cd05069 12 VKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM--------------------------------------PEAFLQEAQ 53 (260)
T ss_pred eeecCcCCCeEEEEEEcCCceEEEEEcccCCcc--------------------------------------HHHHHHHHH
Confidence 469999999999999888888999987653210 012345555
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++ .+...+.+...+. ....+++|||++|.+|.+...-.. ..++...+...+.+++ +..+|..|++|+|
T Consensus 54 ~l~~l----~h~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~d 127 (260)
T cd05069 54 IMKKL----RHDKLVPLYAVVS--EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRD 127 (260)
T ss_pred HHHhC----CCCCeeeEEEEEc--CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecc
Confidence 55554 3333344444442 245689999999999987643211 2245554444444443 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+||++. .++++|||...
T Consensus 128 l~~~Nill~~~~~~~l~dfg~~~ 150 (260)
T cd05069 128 LRAANILVGDNLVCKIADFGLAR 150 (260)
T ss_pred cCcceEEEcCCCeEEECCCccce
Confidence 999999975 48899999764
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=98.70 E-value=9.8e-08 Score=111.76 Aligned_cols=138 Identities=15% Similarity=0.104 Sum_probs=87.2
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||+|++|.||+|+.. +|+.||||+.++.....-..+ ..+..|..
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~----------------------------------~~~~~~~~ 46 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE----------------------------------TLALNERI 46 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHH----------------------------------HHHHHHHH
Confidence 4799999999999965 799999999875422110000 00111211
Q ss_pred HHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
-+ ++... .+++. ++..+.. .....++||||++|..|.+... ....++...+...+.+++ +..+|..|++|+
T Consensus 47 ~~-~~~~~-~~~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~-~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~ 121 (279)
T cd05633 47 ML-SLVST-GDCPF--IVCMTYAFHTPDKLCFILDLMNGGDLHYHLS-QHGVFSEKEMRFYATEIILGLEHMHNRFVVYR 121 (279)
T ss_pred HH-HHHhh-CCCCc--EeEEEEEEecCCeEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCC
Confidence 11 11111 12232 2333322 2345679999999999976532 223456666655555554 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|+|||+. .++++|||....
T Consensus 122 dikp~Nil~~~~~~~~l~dfg~~~~ 146 (279)
T cd05633 122 DLKPANILLDEHGHVRISDLGLACD 146 (279)
T ss_pred CCCHHHEEECCCCCEEEccCCccee
Confidence 9999999974 589999997643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=98.69 E-value=8.2e-08 Score=114.72 Aligned_cols=135 Identities=16% Similarity=0.105 Sum_probs=88.2
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
-||.|++|.||+|+.+ +|+.||||+.+...... ..+ .-.+..|.+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~---------------------------------~~~~~~e~~ 47 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQ-DDD---------------------------------VECTMTEKR 47 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhH---------------------------------HHHHHHHHH
Confidence 4899999999999976 68999999987542110 000 001233444
Q ss_pred HHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+..+. +++. +.+-.++. ....-++||||++|..|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 48 il~~~~----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~d 121 (318)
T cd05570 48 VLALAG----KHPFLTQLHSCFQ-TKDRLFFVMEYVNGGDLMFHIQ-RSGRFDEPRARFYAAEIVLGLQFLHERGIIYRD 121 (318)
T ss_pred HHHhcc----CCCCccceeeEEE-cCCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccC
Confidence 333332 2332 22223322 2344689999999998876532 223566666666555555 6789999999999
Q ss_pred CCCCCCCCC---eeEEecCCch
Q psy12972 566 PHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~ 584 (1578)
++|.||+++ .++++|||..
T Consensus 122 lkp~Nill~~~~~~kl~Dfg~~ 143 (318)
T cd05570 122 LKLDNVLLDSEGHIKIADFGMC 143 (318)
T ss_pred CCHHHeEECCCCcEEecccCCC
Confidence 999999975 5899999965
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.1e-08 Score=114.93 Aligned_cols=137 Identities=16% Similarity=0.134 Sum_probs=88.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+........ +... .+.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-----------------------------~~~~------~~~~E~ 51 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENE-----------------------------EVKE------TTLREL 51 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEEEEEEEecccccc-----------------------------cchh------hHHHHH
Confidence 57899999999999976 78999999876431100 0000 112344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++. +..-+.+..++. .....+|||||++|..+..+.. ...+++...+...+.+++ +..+|..|++|+|
T Consensus 52 ~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d 125 (287)
T cd07848 52 KMLRTLK----QENIVELKEAFR-RRGKLYLVFEYVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRD 125 (287)
T ss_pred HHHHhCC----CccccchhhhEe-cCCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 4444332 222222222221 2245679999999976654422 224566666666666555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||+++ .+++.|||....
T Consensus 126 lkp~Nill~~~~~~kl~Dfg~~~~ 149 (287)
T cd07848 126 IKPENLLISHNDVLKLCDFGFARN 149 (287)
T ss_pred CCHHHEEEcCCCcEEEeeccCccc
Confidence 999999965 489999997644
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd02993 PDI_a_APS_reductase PDIa family, 5'-Adenylylsulfate (APS) reductase subfamily; composed of plant-type APS reductases containing a C-terminal redox active TRX domain and an N-terminal reductase domain which is part of a superfamily that includes N type ATP PPases | Back alignment and domain information |
|---|
Probab=98.69 E-value=6.4e-09 Score=104.48 Aligned_cols=84 Identities=17% Similarity=0.224 Sum_probs=56.7
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecccCccccccCCcccccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDLFGTTDGFSGQDSASRNFHNH 828 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~~~~~~~i~g~~~~~~~~~~i 828 (1578)
.++..+|+..+...+++++|||.||||||+||++++|.|+++|+.+++.++.+..++++.- ..+.+. ....+
T Consensus 5 ~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~la~~~~~~~~~~~~vd~d~~-------~~~~~~-~~~~v 76 (109)
T cd02993 5 TLSRAEIEALAKGERRNQSTLVVLYAPWCPFCQAMEASYEELAEKLAGSNVKVAKFNADGE-------QREFAK-EELQL 76 (109)
T ss_pred eccHHHHHHHHhhhhcCCCEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECCcc-------chhhHH-hhcCC
Confidence 3455678877766667899999999999999999999999999999865443333322220 001111 11234
Q ss_pred ccCccccccccc
Q psy12972 829 MYNPFDDVFSEG 840 (1578)
Q Consensus 829 ~~~Ptiklf~~~ 840 (1578)
..+||+.+|+.+
T Consensus 77 ~~~Pti~~f~~~ 88 (109)
T cd02993 77 KSFPTILFFPKN 88 (109)
T ss_pred CcCCEEEEEcCC
Confidence 455999888764
|
APS reductase catalyzes the reduction of activated sulfate to sulfite, a key step in the biosynthesis of sulfur-containing metabolites. Sulfate is first activated by ATP sulfurylase, forming APS, which can be phosphorylated to 3'-phosphoadenosine-5'-phosphosulfate (PAPS). Depending on the organism, either APS or PAPS can be used for sulfate reduction. Prokaryotes and fungi use PAPS, whereas plants use both APS and PAPS. Since plant-type APS reductase uses glutathione (GSH) as its electron donor, the C-terminal domain may function like glutaredoxin, a GSH-dependent member of the TRX superfamily. The flow of reducing equivalents goes from GSH - C-terminal TRX domain - N-terminal reductase domain - APS. Plant-type APS red |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=98.69 E-value=8.5e-08 Score=110.57 Aligned_cols=134 Identities=16% Similarity=0.110 Sum_probs=91.5
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||.|...++..||||..+++-.. +-+|.+|.+
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05113 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--------------------------------------EDEFIEEAK 51 (256)
T ss_pred eEecCcccceEEEEEecCCCcEEEEEcCCCccc--------------------------------------HHHHHHHHH
Confidence 468999999999998887788999976532110 112455666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++. +..-+.+...+. .....+|+|||+.|..+.+........++...+...+.++. +..+|..|++|+|+
T Consensus 52 ~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl 126 (256)
T cd05113 52 VMMKLS----HEKLVQLYGVCT-KQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDL 126 (256)
T ss_pred HHhcCC----CCCeeeEEEEEc-cCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccc
Confidence 555542 222233333221 22345899999999998876432223466666666655555 67899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|+||++. .++++|||...
T Consensus 127 ~p~nili~~~~~~kl~d~g~~~ 148 (256)
T cd05113 127 AARNCLVDDQGCVKVSDFGLSR 148 (256)
T ss_pred CcceEEEcCCCCEEECCCccce
Confidence 99999965 48999999754
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=98.69 E-value=7.2e-08 Score=111.14 Aligned_cols=134 Identities=14% Similarity=0.113 Sum_probs=93.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||+|++|.||+|..++|+.||||+.+..... .-+|.+|..
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~--------------------------------------~~~~~~E~~ 53 (260)
T cd05067 12 KKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMS--------------------------------------PEAFLAEAN 53 (260)
T ss_pred eeeccCccceEEeeecCCCceEEEEEecCCCCc--------------------------------------HHHHHHHHH
Confidence 569999999999999999999999987543210 013455665
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++. +...+.+...+. ....+++|||++|.+|.+..... ...++...+...+.+++ ++.+|..|++|+|
T Consensus 54 ~l~~l~----h~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~d 127 (260)
T cd05067 54 LMKQLQ----HPRLVRLYAVVT--QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRD 127 (260)
T ss_pred HHHhcC----CcCeeeEEEEEc--cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeeccc
Confidence 555543 222233333331 23468999999999998764321 22456566655555555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||++. .++++|||....
T Consensus 128 l~p~ni~i~~~~~~~l~dfg~~~~ 151 (260)
T cd05067 128 LRAANILVSETLCCKIADFGLARL 151 (260)
T ss_pred ccHHhEEEcCCCCEEEccCcceee
Confidence 999999975 489999997643
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=98.69 E-value=9.8e-08 Score=115.98 Aligned_cols=134 Identities=17% Similarity=0.184 Sum_probs=86.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+......... ....+.+|.
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~~E~ 71 (359)
T cd07876 27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQT-----------------------------------HAKRAYREL 71 (359)
T ss_pred EEeecCCCEEEEEEEEcCCCceeEEEEecccccchh-----------------------------------HHHHHHHHH
Confidence 68999999999999864 799999998753321100 001123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-----CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-----STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-----t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
..+..+ .+...+.+..++..-. ...++||||++|..... ....++...+...+.+++ +..+|..|
T Consensus 72 ~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~----~~~~~~~~~~~~~~~qi~~~L~~LH~~~ 143 (359)
T cd07876 72 VLLKCV----NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQV----IHMELDHERMSYLLYQMLCGIKHLHSAG 143 (359)
T ss_pred HHHHhC----CCCCEeeeeeeeccCCCccccceeEEEEeCCCcCHHHH----HhccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 444333 2333334444332111 23579999998743222 123466666665555555 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.|||+. .++++|||...
T Consensus 144 ivHrDlkp~NIl~~~~~~~kl~Dfg~a~ 171 (359)
T cd07876 144 IIHRDLKPSNIVVKSDCTLKILDFGLAR 171 (359)
T ss_pred cccCCCCHHHEEECCCCCEEEecCCCcc
Confidence 99999999999965 59999999764
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0660|consensus | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.7e-08 Score=116.71 Aligned_cols=139 Identities=17% Similarity=0.152 Sum_probs=85.0
Q ss_pred CcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 408 ENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
-+|||.|+.|.|..|+.+ +|+.||||=..--.. ...+.+ +. .+|
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~---------------------~~~~ak--------Rt------lRE 71 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFE---------------------NQIDAK--------RT------LRE 71 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhhhhhh---------------------chHHHH--------HH------HHH
Confidence 489999999999999965 899999983321011 001111 11 123
Q ss_pred HHHHHHHHH-hhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcC-CCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 487 GRNAERCSK-DLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKG-FSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 487 a~n~~r~~~-~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~-~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
.+-++++++ |.-....|..|....++ ..-++|+|++ +..|..+. .... ++.+-+-..+.+++ ++.||..|++
T Consensus 72 lklLr~~~HeNIi~l~di~~p~~~~~f-~DvYiV~elM-etDL~~ii--k~~~~L~d~H~q~f~YQiLrgLKyiHSAnVi 147 (359)
T KOG0660|consen 72 LKLLRHLRHENIIGLLDIFRPPSRDKF-NDVYLVFELM-ETDLHQII--KSQQDLTDDHAQYFLYQILRGLKYIHSANVI 147 (359)
T ss_pred HHHHHHhcCCCcceEEeeccccccccc-ceeEEehhHH-hhHHHHHH--HcCccccHHHHHHHHHHHHHhcchhhccccc
Confidence 334444431 11112234444222211 3346999999 55565552 2222 55444444555555 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|||+||+|+++. .+++.|||.+.
T Consensus 148 HRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 148 HRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred ccccchhheeeccCCCEEecccccee
Confidence 999999999976 59999999874
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=98.69 E-value=6.3e-08 Score=116.15 Aligned_cols=136 Identities=18% Similarity=0.143 Sum_probs=89.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+........ .....+.+|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~~~E~ 50 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHV-----------------------------------SDATRILREI 50 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEechhhccc-----------------------------------hhHHHHHHHH
Confidence 56899999999999964 79999999875321100 0011245566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC----CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS----STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~----t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+.+.+++ +...+.+..++.... ..-+|||||++| .+.+... ....++...+...+.++. +..+|..|+
T Consensus 51 ~~l~~l~----hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 124 (338)
T cd07859 51 KLLRLLR----HPDIVEIKHIMLPPSRREFKDIYVVFELMES-DLHQVIK-ANDDLTPEHHQFFLYQLLRALKYIHTANV 124 (338)
T ss_pred HHHHhCC----CCCEeeecceEeccCCCCCceEEEEEecCCC-CHHHHHH-hcccCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 6665553 322233333332111 235899999965 5555422 223466666655555554 788999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|+|++|.|||+. .++++|||...
T Consensus 125 vH~dlkp~NIll~~~~~~kL~Dfg~~~ 151 (338)
T cd07859 125 FHRDLKPKNILANADCKLKICDFGLAR 151 (338)
T ss_pred ecCCCCHHHeEECCCCcEEEccCcccc
Confidence 9999999999965 58999999764
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >KOG0587|consensus | Back alignment and domain information |
|---|
Probab=98.69 E-value=3.6e-08 Score=124.04 Aligned_cols=148 Identities=18% Similarity=0.144 Sum_probs=101.8
Q ss_pred CChhhhccccCCcccccccceEEEEEE-ecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHH
Q psy12972 397 CTHSQLFRSFDENPIAAASLAQVFRAV-TKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKV 475 (1578)
Q Consensus 397 ~~~~~iF~~fd~~PlasaSiaQVhrA~-l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 475 (1578)
.++++.|.-+ +-||-|-.|+||+++ .++|+.+||||+.|+....-+..
T Consensus 15 pdp~d~~ei~--evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE----------------------------- 63 (953)
T KOG0587|consen 15 PDPADIFEII--EVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIE----------------------------- 63 (953)
T ss_pred CCCCCccEEE--EEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHH-----------------------------
Confidence 3455666555 568999999999998 56899999999999865431111
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhCCCCCeeec-EEee----CCCCceEEEEeccCCCcCCchhh-HhhcCCCHHHHHHHHH
Q psy12972 476 PLEQELDFLNEGRNAERCSKDLAHLPYVYIP-RILW----DKSSTRVLTTEFIDGVKISDKEG-LLEKGFSLADVDRKLF 549 (1578)
Q Consensus 476 ~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP-~v~~----~~~t~~VLVME~i~G~~l~d~~~-l~~~~~~~~~v~~~l~ 549 (1578)
.|. |+-++ +.+++.+..= .++- .-...-+||||||.|++++|+.. +....++.+.++.++.
T Consensus 64 ---------~ey-nil~~---~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~r 130 (953)
T KOG0587|consen 64 ---------LEY-NMLKK---YSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILR 130 (953)
T ss_pred ---------HHH-HHHHh---ccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHH
Confidence 011 22222 2344432111 1110 11234579999999999999854 3344566677888888
Q ss_pred HHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhhh
Q psy12972 550 TAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRLV 588 (1578)
Q Consensus 550 ~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l~ 588 (1578)
+++ +..+|..-++|+|++--|||.+ .|+++|||...++.
T Consensus 131 e~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQld 174 (953)
T KOG0587|consen 131 EILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 174 (953)
T ss_pred HHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeee
Confidence 887 7778899999999999999965 69999999887764
|
|
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.1e-07 Score=111.12 Aligned_cols=137 Identities=16% Similarity=0.043 Sum_probs=90.1
Q ss_pred cccccccceEEEEEEec-----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTK-----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||+|++|.||+|..+ +|+.||||+........ .-+|
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~-------------------------------------~~~~ 52 (284)
T cd05081 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEH-------------------------------------LRDF 52 (284)
T ss_pred eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHH-------------------------------------HHHH
Confidence 57999999999999743 68999999875432110 0123
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|++.+.++ .+..-+.+........ ...+|||||++|.+|.++..-....++...+...+.+++ +..+|..|
T Consensus 53 ~~e~~~l~~l----~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~ 128 (284)
T cd05081 53 EREIEILKSL----QHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR 128 (284)
T ss_pred HHHHHHHHhC----CCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4555555444 2222233222221122 235799999999999887432223356665555555544 77899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|.||++. .+++.|||....
T Consensus 129 i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 129 YVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred ceeccCCHhhEEECCCCeEEECCCccccc
Confidence 99999999999975 588899997643
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=98.69 E-value=8.2e-08 Score=109.83 Aligned_cols=138 Identities=22% Similarity=0.250 Sum_probs=92.6
Q ss_pred cccccccceEEEEEEecC-----CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTKE-----GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~-----G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|+||+|+..+ ++.||+|+.+++.... ..-++
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~ 48 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ------------------------------------QIEEF 48 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH------------------------------------HHHHH
Confidence 679999999999999753 4899999987653211 11123
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcC-CCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKG-FSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~-~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
..|.+.+.++. +...+.+-..+. .....+++|||++|.+|.+........ ++...+...+.+++ +..+|..|
T Consensus 49 ~~e~~~l~~l~----~~~i~~~~~~~~-~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~ 123 (258)
T smart00219 49 LREARIMRKLD----HPNIVKLLGVCT-EEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN 123 (258)
T ss_pred HHHHHHHHhcC----CCchheEEEEEc-CCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 44555554441 222122222221 224578999999999998874422222 67666666555554 68899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|+|++|+||++. .++++|||.....
T Consensus 124 ~~h~dl~~~nil~~~~~~~~l~dfg~~~~~ 153 (258)
T smart00219 124 FIHRDLAARNCLVGENLVVKISDFGLSRDL 153 (258)
T ss_pred eeecccccceEEEccCCeEEEcccCCceec
Confidence 99999999999965 5899999976443
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=98.68 E-value=1e-07 Score=109.85 Aligned_cols=135 Identities=16% Similarity=0.107 Sum_probs=91.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|...+++.||||...+.-.. .-++..|+.
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~--------------------------------------~~~~~~e~~ 53 (261)
T cd05072 12 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS--------------------------------------VQAFLEEAN 53 (261)
T ss_pred eecCCcCCceEEEEEecCCceEEEEEccCCchh--------------------------------------HHHHHHHHH
Confidence 579999999999999888999999987643110 002345555
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++. +..-+.+-..+ .-....+|+|||++|.+|.+..... ....+...+...+.+++ +..+|..|++|+|
T Consensus 54 ~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~d 128 (261)
T cd05072 54 LMKTLQ----HDKLVRLYAVV-TKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRD 128 (261)
T ss_pred HHHhCC----CCCeeeEEEEE-cCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence 555542 22222222222 2234568999999999998864322 23355555555554544 6789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||++. .+++.|||....
T Consensus 129 l~p~nili~~~~~~~l~dfg~~~~ 152 (261)
T cd05072 129 LRAANVLVSESLMCKIADFGLARV 152 (261)
T ss_pred cchhhEEecCCCcEEECCCcccee
Confidence 999999965 478899997643
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=98.68 E-value=9.1e-08 Score=109.86 Aligned_cols=137 Identities=18% Similarity=0.122 Sum_probs=92.3
Q ss_pred cccccccceEEEEEEecC--C--CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTKE--G--VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~--G--~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||+|+.|.||+|...+ | ..||||+.+++... ...-+|.
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~------------------------------------~~~~~~~ 44 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS------------------------------------DIMDDFL 44 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH------------------------------------HHHHHHH
Confidence 368999999999998653 3 36999988764331 0011234
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+|.+.+.+++ +...+.+...+.+ ....+||||++|.+|.+...-.. ..++...+...+.++. +..+|..|+
T Consensus 45 ~e~~~l~~l~----h~~iv~~~~~~~~--~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 118 (257)
T cd05040 45 KEAAIMHSLD----HENLIRLYGVVLT--HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRF 118 (257)
T ss_pred HHHHHHhhcC----CCCccceeEEEcC--CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5555555543 3333444444433 56689999999999987643211 2355555555555544 678899999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+|+|++|.||++. .++++|||....+
T Consensus 119 ~H~di~p~nil~~~~~~~kl~dfg~~~~~ 147 (257)
T cd05040 119 IHRDLAARNILLASDDKVKIGDFGLMRAL 147 (257)
T ss_pred cccccCcccEEEecCCEEEeccccccccc
Confidence 9999999999975 5899999976443
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=98.68 E-value=1e-07 Score=112.07 Aligned_cols=144 Identities=17% Similarity=0.214 Sum_probs=96.1
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.+.|+-. +.||.|++|.||+|+.. +|+.||+|+........
T Consensus 10 ~~~~y~i~--~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~----------------------------------- 52 (292)
T cd06644 10 PNEVWEII--GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE----------------------------------- 52 (292)
T ss_pred cchhhhhh--heecCCCCeEEEEEEECCCCceEEEEEeccCCHHH-----------------------------------
Confidence 34555544 45999999999999975 68999999975432110
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
.-++..|.+.+.++. +..-+.+-..+ ...+.-+|||||++|..+.....-...+++...+...+.+++ +..
T Consensus 53 --~~~~~~e~~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~ 125 (292)
T cd06644 53 --LEDYMVEIEILATCN----HPYIVKLLGAF-YWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQY 125 (292)
T ss_pred --HHHHHHHHHHHHhCC----CCcEeeeEEEE-EeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 012345555555442 22222222222 234567899999999998765332234567666666655555 678
Q ss_pred HHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 556 IFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|..|++|+|++|.||++. .++++|||....
T Consensus 126 lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~ 159 (292)
T cd06644 126 LHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAK 159 (292)
T ss_pred HhcCCeeecCCCcceEEEcCCCCEEEccCcccee
Confidence 8999999999999999975 599999997543
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd03004 PDI_a_ERdj5_C PDIa family, C-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains | Back alignment and domain information |
|---|
Probab=98.68 E-value=4.3e-09 Score=104.50 Aligned_cols=77 Identities=19% Similarity=0.322 Sum_probs=55.8
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeecc-cCccccccCCcccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYDL-FGTTDGFSGQDSASRNFH 826 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~~-~~~~~~i~g~~~~~~~~~ 826 (1578)
.++..||++.+.. ++++++|.||||||++|+++.|.|+++++.+++. .++.++|.... +|+..++.
T Consensus 5 ~l~~~~f~~~i~~--~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~i~---------- 72 (104)
T cd03004 5 TLTPEDFPELVLN--RKEPWLVDFYAPWCGPCQALLPELRKAARALKGKVKVGSVDCQKYESLCQQANIR---------- 72 (104)
T ss_pred EcCHHHHHHHHhc--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECCchHHHHHHcCCC----------
Confidence 4556688887753 4569999999999999999999999999998654 34444443221 44444443
Q ss_pred ccccCccccccccc
Q psy12972 827 NHMYNPFDDVFSEG 840 (1578)
Q Consensus 827 ~i~~~Ptiklf~~~ 840 (1578)
.+||+.+|..+
T Consensus 73 ---~~Pt~~~~~~g 83 (104)
T cd03004 73 ---AYPTIRLYPGN 83 (104)
T ss_pred ---cccEEEEEcCC
Confidence 44998888875
|
This subfamily is composed of the three TRX domains located at the C-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation. Also included in the alignment is the single complete TRX domain of an uncharacterized protein from Tetraodon nigroviridis, which also contains a DnaJ domain at its N-terminus. |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=98.68 E-value=1e-07 Score=109.81 Aligned_cols=133 Identities=16% Similarity=0.122 Sum_probs=93.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|+||+|...++..||+|..+++... +-+|.+|+.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~--------------------------------------~~~~~~E~~ 53 (260)
T cd05070 12 KKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS--------------------------------------PESFLEEAQ 53 (260)
T ss_pred heeccccCceEEEEEecCCceeEEEEecCCCCC--------------------------------------HHHHHHHHH
Confidence 469999999999999888999999998764211 012455555
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
-+.++ .+...+.+..... ....+++|||++|.+|.+...-. ...++...+...+.+++ +..+|..|++|+|
T Consensus 54 ~l~~l----~~~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~d 127 (260)
T cd05070 54 IMKKL----RHDKLVQLYAVVS--EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRD 127 (260)
T ss_pred HHHhc----CCCceEEEEeEEC--CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 55444 2333344444442 34578999999999998764311 12356555555555554 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||+++ .++++|||...
T Consensus 128 i~p~Nili~~~~~~~l~dfg~~~ 150 (260)
T cd05070 128 LRSANILVGDGLVCKIADFGLAR 150 (260)
T ss_pred CccceEEEeCCceEEeCCceeee
Confidence 999999965 47889999764
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.68 E-value=1e-07 Score=111.14 Aligned_cols=136 Identities=21% Similarity=0.252 Sum_probs=93.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||+|+........ .-+|..|+
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-------------------------------------~~~~~~e~ 53 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEE-------------------------------------LEDFMVEI 53 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHH-------------------------------------HHHHHHHH
Confidence 45899999999999975 79999999986432111 01345566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++. +..-+.+...+. ......|||||++|..+.++..-....++...+...+.++. +..+|..|++|+|
T Consensus 54 ~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~d 128 (280)
T cd06611 54 DILSECK----HPNIVGLYEAYF-YENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRD 128 (280)
T ss_pred HHHHhCC----CCceeEEEEEEe-cCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 5555543 222233333332 23446799999999999887443334566666666666555 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||++. .++++|||....
T Consensus 129 l~p~nili~~~~~~~l~d~g~~~~ 152 (280)
T cd06611 129 LKAGNILLTLDGDVKLADFGVSAK 152 (280)
T ss_pred CChhhEEECCCCCEEEccCccchh
Confidence 999999965 589999997543
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=98.68 E-value=5.1e-08 Score=112.93 Aligned_cols=144 Identities=17% Similarity=0.120 Sum_probs=93.0
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
++++|... +.||.|++|+||+|... +|+.||||+....-.
T Consensus 4 ~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~------------------------------------- 44 (272)
T cd06637 4 PAGIFELV--ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD------------------------------------- 44 (272)
T ss_pred hhhhhhHH--HheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc-------------------------------------
Confidence 45556554 56999999999999965 689999998742110
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCC-----CCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDK-----SSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTA 551 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~-----~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~ 551 (1578)
.+.++.+|...+.++. .+..-+.+...+... ....+++|||+.|.++.++.... ...++...+...+.++
T Consensus 45 -~~~~~~~e~~~l~~~~---~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi 120 (272)
T cd06637 45 -EEEEIKQEINMLKKYS---HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREI 120 (272)
T ss_pred -cHHHHHHHHHHHHHhc---CCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 0112334444444432 122223333333211 12357999999999998864321 1235555555554454
Q ss_pred H--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 552 F--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 552 ~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+ +..+|..|++|+|+||+||++. .++++|||...
T Consensus 121 ~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~ 159 (272)
T cd06637 121 LRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 159 (272)
T ss_pred HHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCce
Confidence 4 6789999999999999999965 48999999764
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=98.68 E-value=7.9e-08 Score=111.87 Aligned_cols=136 Identities=15% Similarity=0.096 Sum_probs=89.8
Q ss_pred cccccccceEEEEEEecC------CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTKE------GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~------G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+..+ ++.||||+........ .+-+
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~ 54 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASND------------------------------------ARKD 54 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHH------------------------------------HHHH
Confidence 568999999999998743 4899999875322110 1124
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-------------hcCCCHHHHHHHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-------------EKGFSLADVDRKLF 549 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-------------~~~~~~~~v~~~l~ 549 (1578)
|.+|++.++++. +...+.+.... ......++||||++|.+|.+...-. ...++...+...+.
T Consensus 55 ~~~e~~~l~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 129 (280)
T cd05049 55 FEREAELLTNFQ----HENIVKFYGVC-TEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAV 129 (280)
T ss_pred HHHHHHHHHhcC----CCCchheeeEE-ecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHH
Confidence 566777666653 22222222222 2235678999999999998764311 11233344444444
Q ss_pred HHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 550 TAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 550 ~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+++ +..+|..|++|+|++|+||+++ .++++|||...
T Consensus 130 ~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~ 170 (280)
T cd05049 130 QIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSR 170 (280)
T ss_pred HHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccce
Confidence 444 6788999999999999999975 58999999764
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >KOG1187|consensus | Back alignment and domain information |
|---|
Probab=98.68 E-value=7.3e-08 Score=116.94 Aligned_cols=138 Identities=21% Similarity=0.205 Sum_probs=93.7
Q ss_pred ccCC-cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 405 SFDE-NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 405 ~fd~-~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
.|++ +-||.|++|.||+|.+.+|+.||||...++...+ +-+|
T Consensus 76 ~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-------------------------------------~~eF 118 (361)
T KOG1187|consen 76 NFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-------------------------------------EREF 118 (361)
T ss_pred CCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-------------------------------------hhHH
Confidence 4554 6899999999999999999999999665443210 2236
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCC-ceEEEEeccCCCcCCchhhHhhc-CCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSS-TRVLTTEFIDGVKISDKEGLLEK-GFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t-~~VLVME~i~G~~l~d~~~l~~~-~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
.+|...+.++++ ..-|..=....+ .+ .++||-||++.++|.|....... .++-..-.++.+.+. ++.+|..
T Consensus 119 ~~Ei~~ls~l~H----~Nlv~LlGyC~e-~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~ 193 (361)
T KOG1187|consen 119 LNEVEILSRLRH----PNLVKLLGYCLE-GGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEG 193 (361)
T ss_pred HHHHHHHhcCCC----cCcccEEEEEec-CCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccC
Confidence 777777777652 222333221111 23 48999999998899887443222 344443333333333 7788875
Q ss_pred C---ccccCCCCCCCCCC---eeEEecCCch
Q psy12972 560 G---FVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 560 G---~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
. ++|+|++|.|||+. ..++.|||..
T Consensus 194 ~~~~iiHrDiKssNILLD~~~~aKlsDFGLa 224 (361)
T KOG1187|consen 194 CPPPIIHRDIKSSNILLDEDFNAKLSDFGLA 224 (361)
T ss_pred CCCCEecCCCCHHHeeECCCCCEEccCccCc
Confidence 5 99999999999965 4788999986
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=98.67 E-value=1e-07 Score=113.65 Aligned_cols=137 Identities=15% Similarity=0.079 Sum_probs=90.4
Q ss_pred cccccccceEEEEEEec-CCC----EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGV----EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~----~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||+|++|+||+|+.. +|+ .||||+..+..... ..-++
T Consensus 13 ~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~ 56 (316)
T cd05108 13 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK------------------------------------ANKEI 56 (316)
T ss_pred eeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHH------------------------------------HHHHH
Confidence 68999999999999854 454 48999875432110 01123
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
..|+..+..+ .+...+.+-... ......++|||++|.++.+...-....++...+...+.++. ++.+|..|+
T Consensus 57 ~~e~~~l~~l----~h~niv~~~g~~--~~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 130 (316)
T cd05108 57 LDEAYVMASV----DNPHVCRLLGIC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRL 130 (316)
T ss_pred HHHHHHHHhC----CCCCCCeEEEEE--cCCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCe
Confidence 4455544443 222223332222 23456799999999998876432233456665655555555 788999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+|+|++|.|||++ .++++|||....+
T Consensus 131 iH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 131 VHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred eccccchhheEecCCCcEEEccccccccc
Confidence 9999999999975 4899999977543
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=98.67 E-value=1e-07 Score=111.38 Aligned_cols=135 Identities=14% Similarity=0.045 Sum_probs=91.7
Q ss_pred cccccccceEEEEEEe-----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVT-----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|+||.++. .+|+.||||+.+...... .+-.|
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~ 53 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQ------------------------------------NTSGW 53 (283)
T ss_pred eecccCCCcEEEEeeEccccCCCCceEEEEEeccccChH------------------------------------HHHHH
Confidence 5689999999988652 378899999886542210 01124
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|++.+.++. +..-+.+...+.... ...+|+|||++|.++.+.. ....++...+...+.+++ +..+|..|
T Consensus 54 ~~E~~~l~~l~----h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~--~~~~l~~~~~~~i~~~l~~~l~~lH~~~ 127 (283)
T cd05080 54 KKEINILKTLY----HENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYL--PKHKLNLAQLLLFAQQICEGMAYLHSQH 127 (283)
T ss_pred HHHHHHHHhCC----CCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHH--HHcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 55665555542 222222222222221 2357999999999998763 345677777776666655 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.||++. .+++.|||...
T Consensus 128 i~H~dlkp~Nili~~~~~~~l~dfg~~~ 155 (283)
T cd05080 128 YIHRDLAARNVLLDNDRLVKIGDFGLAK 155 (283)
T ss_pred eeccccChheEEEcCCCcEEEeeccccc
Confidence 99999999999975 48899999754
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=98.67 E-value=4.8e-08 Score=118.01 Aligned_cols=136 Identities=17% Similarity=0.228 Sum_probs=88.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|.||+|+.. +|+.||||+....... + ... -.+.+|+
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~-------------------------~~~------~~~~~E~ 65 (343)
T cd07880 21 KQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQS----E-------------------------LFA------KRAYREL 65 (343)
T ss_pred EEeeecCCeEEEEEEECCCCcEEEEEEecccccc----h-------------------------HHH------HHHHHHH
Confidence 68999999999999854 8999999987532110 0 000 1234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC-----CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD-----KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~-----~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.+.++. +..-+.+..++.. .+...+|||||+ |..+.++. ....++...+...+.+++ +..+|..|
T Consensus 66 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~--~~~~l~~~~~~~i~~qi~~al~~LH~~g 138 (343)
T cd07880 66 RLLKHMK----HENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLM--KHEKLSEDRIQFLVYQMLKGLKYIHAAG 138 (343)
T ss_pred HHHHhcC----CCCccceeeeecCCccccccceEEEEEecC-CCCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 5555543 2222333333321 123458999999 76776653 334566665555555554 68899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|.||+++ .++++|||....
T Consensus 139 i~H~dlkp~Nill~~~~~~kl~dfg~~~~ 167 (343)
T cd07880 139 IIHRDLKPGNLAVNEDCELKILDFGLARQ 167 (343)
T ss_pred eecCCCCHHHEEEcCCCCEEEeecccccc
Confidence 99999999999965 489999997643
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >KOG0659|consensus | Back alignment and domain information |
|---|
Probab=98.67 E-value=7.6e-08 Score=107.02 Aligned_cols=133 Identities=18% Similarity=0.154 Sum_probs=86.6
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-+|.|.+|.||+|+. .+|+.||||-.+.+-.. ..++ .+..+|+-+.+|.
T Consensus 8 ~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~k--------------------dGi~---------~talREIK~Lqel 58 (318)
T KOG0659|consen 8 EKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAK--------------------DGIN---------RTALREIKLLQEL 58 (318)
T ss_pred hhhcCcceEEEEEEEecCCCcEEEEEEeeccccc--------------------cCcc---------HHHHHHHHHHHHc
Confidence 4589999999999994 58999999977655211 1111 1222333333333
Q ss_pred H--HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 R--NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~--n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+ |.-.+... +... +.-.||.||++- .|..+..-...-+++..+-..+..++ ++.+|.+.++|
T Consensus 59 ~h~nIi~LiD~------------F~~~-~~l~lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlH 124 (318)
T KOG0659|consen 59 KHPNIIELIDV------------FPHK-SNLSLVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILH 124 (318)
T ss_pred cCcchhhhhhh------------ccCC-CceEEEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 2 22233322 2222 233589999953 44444333344567788877777766 88899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCch
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~ 584 (1578)
||+||.|+|++ .+++-|||..
T Consensus 125 RDlKPnNLLis~~g~lKiADFGLA 148 (318)
T KOG0659|consen 125 RDLKPNNLLISSDGQLKIADFGLA 148 (318)
T ss_pred ccCCccceEEcCCCcEEeecccch
Confidence 99999999965 5888888865
|
|
| >cd03007 PDI_a_ERp29_N PDIa family, endoplasmic reticulum protein 29 (ERp29) subfamily; ERp29 is a ubiquitous ER-resident protein expressed in high levels in secretory cells | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.1e-09 Score=106.91 Aligned_cols=76 Identities=16% Similarity=0.080 Sum_probs=55.4
Q ss_pred cccccccccccccCCccCccceecccc--cccc---ccccchHHHHHHHHHhcCCCcceeeeee------cccCcccccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYS--DWCF---ACLQVEPIFKKLMDELSPLGVGFFTVHY------DLFGTTDGFS 816 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYA--pwCg---hCk~LaP~weklA~~Lk~~~vg~v~~~~------~~~~~~~~i~ 816 (1578)
+.|+..||++.| ++++.+||+||| |||+ ||++|+|+|.++|+. ..++-|+|+. ..+|+.++++
T Consensus 4 v~L~~~nF~~~v---~~~~~vlV~F~A~~Pwc~k~~~~~~LA~e~~~aa~~---v~lakVd~~d~~~~~~~~L~~~y~I~ 77 (116)
T cd03007 4 VDLDTVTFYKVI---PKFKYSLVKFDTAYPYGEKHEAFTRLAESSASATDD---LLVAEVGIKDYGEKLNMELGERYKLD 77 (116)
T ss_pred eECChhhHHHHH---hcCCcEEEEEeCCCCCCCChHHHHHHHHHHHhhcCc---eEEEEEecccccchhhHHHHHHhCCC
Confidence 567888999988 467889999999 9999 999999999998875 2344444421 1255555555
Q ss_pred CCccccccccccccCccccccccc
Q psy12972 817 GQDSASRNFHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 817 g~~~~~~~~~~i~~~Ptiklf~~~ 840 (1578)
. ..|||+++|..+
T Consensus 78 ~-----------~gyPTl~lF~~g 90 (116)
T cd03007 78 K-----------ESYPVIYLFHGG 90 (116)
T ss_pred c-----------CCCCEEEEEeCC
Confidence 0 034999999976
|
It forms homodimers and higher oligomers in vitro and in vivo. It contains a redox inactive TRX-like domain at the N-terminus, which is homologous to the redox active TRX (a) domains of PDI, and a C-terminal helical domain similar to the C-terminal domain of P5. The expression profile of ERp29 suggests a role in secretory protein production distinct from that of PDI. It has also been identified as a member of the thyroglobulin folding complex. The Drosophila homolog, Wind, is the product of windbeutel, an essential gene in the development of dorsal-ventral patterning. Wind is required for correct targeting of Pipe, a Golgi-resident type II transmembrane protein with homology to 2-O-sulfotransferase. |
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.1e-07 Score=98.99 Aligned_cols=125 Identities=18% Similarity=0.181 Sum_probs=87.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
++++.|+.+.||+++..+ +.++||+..+... +.++..|..
T Consensus 4 ~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~---------------------------------------~~~~~~e~~ 43 (155)
T cd05120 4 KLLKGGLTNRVYLLGTKD-EDYVLKINPSREK---------------------------------------GADREREVA 43 (155)
T ss_pred eecccccccceEEEEecC-CeEEEEecCCCCc---------------------------------------hhHHHHHHH
Confidence 679999999999999754 7899998765421 124567777
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCC--CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHH---cCccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKS--STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQ---TGFVH 563 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~--t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~---~G~vH 563 (1578)
.++++++. ...+|+++.... +..+++|||++|.++... . ......+...+.+. +..+|. .|++|
T Consensus 44 ~~~~l~~~-----~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~-~----~~~~~~~~~~~~~~-l~~lh~~~~~~i~H 112 (155)
T cd05120 44 ILQLLARK-----GLPVPKVLASGESDGWSYLLMEWIEGETLDEV-S----EEEKEDIAEQLAEL-LAKLHQLPLLVLCH 112 (155)
T ss_pred HHHHHHHc-----CCCCCeEEEEcCCCCccEEEEEecCCeecccC-C----HHHHHHHHHHHHHH-HHHHhCCCceEEEe
Confidence 77777653 356788775443 358999999999988764 0 01122333343333 556665 48999
Q ss_pred cCCCCCCCCCC---eeEEecCCch
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~ 584 (1578)
+|+||+|||+. .++++|||..
T Consensus 113 ~Dl~~~Nil~~~~~~~~l~Df~~~ 136 (155)
T cd05120 113 GDLHPGNILVDDGKILGIIDWEYA 136 (155)
T ss_pred cCCCcceEEEECCcEEEEEecccc
Confidence 99999999964 4777777754
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0610|consensus | Back alignment and domain information |
|---|
Probab=98.67 E-value=6.9e-08 Score=113.13 Aligned_cols=138 Identities=14% Similarity=0.097 Sum_probs=90.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-||.|.+|.||.|+++ ++..-|+||.-...-.. -+.+.+ . ..|.
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~-------rkKl~R----a-----------------------~tE~ 128 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLAS-------RKKLKR----A-----------------------QTER 128 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHHHhh-------hhHHHH----H-----------------------HHHH
Confidence 57899999999999987 46899999984321110 000000 0 1122
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceE--EEEeccCCCcCCchhhHhhcCCCHHHHHH-HHHH--HHHHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRV--LTTEFIDGVKISDKEGLLEKGFSLADVDR-KLFT--AFAEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~V--LVME~i~G~~l~d~~~l~~~~~~~~~v~~-~l~~--~~l~~i~~~G~v 562 (1578)
.-+..+ ++ --+|..|-.+.|+++ |||||+.|..|..+..-+..+.=.+..++ -+.+ +.++.+|-.|||
T Consensus 129 eIL~~l-----DH--PFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGiv 201 (459)
T KOG0610|consen 129 EILSLL-----DH--PFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIV 201 (459)
T ss_pred HHHHhc-----CC--CccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhcee
Confidence 222222 22 357899988888875 99999999999876443222221222222 2222 238999999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
-||+||.|||++ .|-+.||....+.
T Consensus 202 YRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 202 YRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred eccCCcceeEEecCCcEEeeeccccccC
Confidence 999999999976 4788888866544
|
|
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=98.67 E-value=9.9e-08 Score=109.48 Aligned_cols=134 Identities=13% Similarity=0.117 Sum_probs=88.4
Q ss_pred cccccccceEEEEEEecCCC-----------EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGV-----------EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~-----------~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.||.|++|.||+|+.++.. .|++|+..+....
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~------------------------------------ 44 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD------------------------------------ 44 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh------------------------------------
Confidence 35899999999999987432 4777765433110
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
+..|.+|+..+.++ .+...+.+...... ...+|||||++|.+|.+........++...+...+.+++ +..
T Consensus 45 --~~~~~~e~~~l~~l----~h~~i~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~ 116 (259)
T cd05037 45 --SLAFFETASLMSQL----SHKHLVKLYGVCVR--DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHY 116 (259)
T ss_pred --HHHHHHHHHHHHcC----CCcchhheeeEEec--CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHH
Confidence 12334454444433 23222333333322 567999999999999887543333466666655555554 688
Q ss_pred HHHcCccccCCCCCCCCCC----------eeEEecCCchhh
Q psy12972 556 IFQTGFVHADPHSGNDVNT----------WLYPVDLGDKFR 586 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~----------~v~liDfG~~~~ 586 (1578)
+|..|++|+|++|.|||+. .+++.|||....
T Consensus 117 LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~ 157 (259)
T cd05037 117 LEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT 157 (259)
T ss_pred HhhCCeecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence 9999999999999999954 388999997654
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >KOG0714|consensus | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.8e-08 Score=118.81 Aligned_cols=68 Identities=46% Similarity=0.881 Sum_probs=63.8
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCCh--hHHHHHHHHHHHHHHcCCHHHHHhccccCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDP--TAQEKFLQLTEAYNILSDAERRKQYDLFGT 703 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~ 703 (1578)
..|+|++|||.+.|+.++|++||++++++||||+++.+ .+..+|.++.+||++|+|+.+|..||.+|.
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~ 71 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGE 71 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCc
Confidence 46999999999999999999999999999999998876 566689999999999999999999999998
|
|
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=98.66 E-value=3e-07 Score=106.20 Aligned_cols=137 Identities=19% Similarity=0.149 Sum_probs=88.8
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecch-hhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYID-LRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~-i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
+.||.|++|+||+|+. .+|+.||||..... ... .....+|.+|
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~-----------------------------------~~~~~~~~~e 52 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMD-----------------------------------AKARADCIKE 52 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhhhh-----------------------------------HHHHHHHHHH
Confidence 5799999999999995 58999999965421 000 0111244556
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH-h--hcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL-L--EKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l-~--~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
.+-+.++. +..-+.+-..+.+ ....+++|||++|.++.++... . ...++...+...+.+++ +..+|..|+
T Consensus 53 ~~~l~~~~----h~~i~~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i 127 (267)
T cd08229 53 IDLLKQLN----HPNVIKYYASFIE-DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRV 127 (267)
T ss_pred HHHHHHcc----CCchhhhhheeEe-CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 55555442 2221222222211 1345799999999999886431 1 12345555555555554 688999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|+|++|.||++. .+++.|||...
T Consensus 128 ~H~dl~p~nili~~~~~~~l~dfg~~~ 154 (267)
T cd08229 128 MHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred ecCCCCHHHEEEcCCCCEEECcchhhh
Confidence 9999999999965 58999999754
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.4e-07 Score=109.35 Aligned_cols=134 Identities=15% Similarity=0.112 Sum_probs=86.6
Q ss_pred ccccccceEEEEEEec---CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 410 PIAAASLAQVFRAVTK---EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~---~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
.||.|++|.||+|... ++..||+|..+.... ...+.+|.+|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~------------------------------------~~~~~~~~~E 45 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS------------------------------------VQEQMKFLEE 45 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCC------------------------------------hHHHHHHHHH
Confidence 5899999999999865 346799997643211 0122356677
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh----cCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE----KGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~----~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+..+.++. +...+.+-... ...+..+|||||++|.+|.++..-.. ...+...+...+.++. +..+|..|
T Consensus 46 ~~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 120 (269)
T cd05087 46 AQPYRSLQ----HSNLLQCLGQC-TEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN 120 (269)
T ss_pred HHHHHhCC----CCCEeeEEEEE-cCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence 77666653 22222222222 22345689999999999987643211 1223333333333333 67889999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCch
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
++|+|++|.||++. .++++|||..
T Consensus 121 i~H~dlkp~nil~~~~~~~kL~dfg~~ 147 (269)
T cd05087 121 FIHSDLALRNCLLTADLTVKIGDYGLS 147 (269)
T ss_pred EeccccCcceEEEcCCCcEEECCcccc
Confidence 99999999999976 4899999965
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.66 E-value=9.9e-08 Score=109.82 Aligned_cols=132 Identities=16% Similarity=0.136 Sum_probs=89.5
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|..++++.+|||+..++... +-+|..|..
T Consensus 10 ~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05059 10 KELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS--------------------------------------EDDFIEEAK 51 (256)
T ss_pred hhhccCCCceEEEeEecCCccEEEEEeccCCCC--------------------------------------HHHHHHHHH
Confidence 568999999999999888889999987543210 012334444
Q ss_pred HHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
.+.++. ++. +++.+. ......++||||++|.+|.+........++...+...+.++. +..+|..|++|+
T Consensus 52 ~l~~l~-----~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~ 124 (256)
T cd05059 52 VMMKLS-----HPN--LVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHR 124 (256)
T ss_pred HHHhCC-----CCC--EEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 444432 232 233332 233456899999999999886432223355555555554444 678899999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.||++. .++++|||...
T Consensus 125 dl~p~ni~i~~~~~~kl~dfg~~~ 148 (256)
T cd05059 125 DLAARNCLVGEDNVVKVSDFGLAR 148 (256)
T ss_pred cccHhhEEECCCCcEEECCcccce
Confidence 9999999964 48999999753
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.5e-07 Score=108.46 Aligned_cols=138 Identities=17% Similarity=0.112 Sum_probs=87.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++|+.|++|+||+|+.. +|+.||||+.+..-.. .- . ...++..|.
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~-------~~--------------------~-------~~~~~~~e~ 47 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMI-------AK--------------------N-------QVTNVKAER 47 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhh-------HH--------------------H-------HHHHHHHHH
Confidence 57999999999999865 7999999987532100 00 0 000112221
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+. ....+...+.+...+. ....-+|+|||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 48 ~~~~---~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~d 122 (260)
T cd05611 48 AIMM---IQGESPYVAKLYYSFQ-SKDYLYLVMEYLNGGDCASLIK-TLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRD 122 (260)
T ss_pred HHHh---hcCCCCCeeeeeeeEE-cCCeEEEEEeccCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 1111 1112222233333322 1234689999999999988743 223456666666555555 6789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 123 l~p~nil~~~~~~~~l~dfg~~~ 145 (260)
T cd05611 123 IKPENLLIDQTGHLKLTDFGLSR 145 (260)
T ss_pred CCHHHeEECCCCcEEEeecccce
Confidence 999999965 58999999654
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=98.66 E-value=6.6e-08 Score=117.23 Aligned_cols=134 Identities=16% Similarity=0.167 Sum_probs=84.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|... +|+.||||+......... ...++.+|.
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------------~~~~~~~E~ 67 (355)
T cd07874 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT-----------------------------------HAKRAYREL 67 (355)
T ss_pred EEeeecCCEEEEEEEecCCCceEEEEEeCCcccChH-----------------------------------HHHHHHHHH
Confidence 68999999999999864 789999998754321100 000122333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC-----CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD-----KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~-----~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
..+..+ .+..-+.+..++.. .....+|||||++|. +.+. ....++...+...+.+++ +..+|..|
T Consensus 68 ~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~~g 139 (355)
T cd07874 68 VLMKCV----NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDAN-LCQV---IQMELDHERMSYLLYQMLCGIKHLHSAG 139 (355)
T ss_pred HHHHHh----CCCchhceeeeeeccccccccceeEEEhhhhccc-HHHH---HhhcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 333333 22222333333321 112357999999874 3222 123456666555555554 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|+||+||++. .++++|||...
T Consensus 140 ivHrDikp~Nill~~~~~~kl~Dfg~~~ 167 (355)
T cd07874 140 IIHRDLKPSNIVVKSDCTLKILDFGLAR 167 (355)
T ss_pred cccCCCChHHEEECCCCCEEEeeCcccc
Confidence 99999999999975 58999999764
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=98.66 E-value=8.1e-08 Score=113.48 Aligned_cols=136 Identities=17% Similarity=0.169 Sum_probs=88.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||+|..+....... ..++.+|.
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~E~ 55 (301)
T cd07873 12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGA------------------------------------PCTAIREV 55 (301)
T ss_pred eEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCc------------------------------------hhHHHHHH
Confidence 67999999999999865 789999998754321110 00123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+-..+. .....+|||||++| .+.+...-....++...+...+.+++ +..+|..|++|+|
T Consensus 56 ~~l~~l~----h~nI~~~~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~d 129 (301)
T cd07873 56 SLLKDLK----HANIVTLHDIIH-TEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRD 129 (301)
T ss_pred HHHHhcC----CCCcceEEEEEe-cCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence 4444442 322233333332 22346799999986 55444222233456666655555554 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+||++. .++++|||....
T Consensus 130 lkp~Nil~~~~~~~kl~dfg~~~~ 153 (301)
T cd07873 130 LKPQNLLINERGELKLADFGLARA 153 (301)
T ss_pred CCHHHEEECCCCcEEECcCcchhc
Confidence 999999975 589999997643
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.66 E-value=8.3e-08 Score=113.08 Aligned_cols=137 Identities=18% Similarity=0.186 Sum_probs=90.1
Q ss_pred cccccccceEEEEEEecC-------------C--CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKE-------------G--VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINEL 473 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~-------------G--~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 473 (1578)
+.||.|++|.||+|+... | ..||||+.+++.....
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------ 60 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTA------------------------------ 60 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHH------------------------------
Confidence 569999999999997542 2 3489999887543210
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-----------cCCCHH
Q psy12972 474 KVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-----------KGFSLA 542 (1578)
Q Consensus 474 ~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-----------~~~~~~ 542 (1578)
.-+|.+|.+.+.++. +...+.+-..+. .....+|||||++|.+|.+...... ...+..
T Consensus 61 ------~~~~~~ei~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~ 129 (295)
T cd05097 61 ------RNDFLKEIKIMSRLK----NPNIIRLLGVCV-SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIA 129 (295)
T ss_pred ------HHHHHHHHHHHHhCC----CCCcCeEEEEEc-CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHH
Confidence 113456666666653 222233323222 2355689999999999988643211 013444
Q ss_pred HHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 543 DVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 543 ~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
.+...+.+++ +..+|..|++|+|++|+||+++ .++++|||....
T Consensus 130 ~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~ 178 (295)
T cd05097 130 NLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRN 178 (295)
T ss_pred HHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccc
Confidence 5555555544 6788999999999999999975 489999997643
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=8.3e-08 Score=121.04 Aligned_cols=136 Identities=15% Similarity=0.121 Sum_probs=84.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+.... ..+. +..|.
T Consensus 135 ~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~--------------------------------~~~~------~~~e~ 176 (467)
T PTZ00284 135 SLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK--------------------------------YTRD------AKIEI 176 (467)
T ss_pred EEEEeccCEEEEEEEEcCCCeEEEEEEEecchh--------------------------------hHHH------HHHHH
Confidence 57999999999999965 689999999752100 0001 12233
Q ss_pred HHHHHHHHh--hCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCcc
Q psy12972 488 RNAERCSKD--LAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~--~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~v 562 (1578)
+.+++++.. ..+...+.+...+..-...-+||||+. |..+.+... ....++...+...+.+++ +..+|. .|++
T Consensus 177 ~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~-~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIi 254 (467)
T PTZ00284 177 QFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIM-KHGPFSHRHLAQIIFQTGVALDYFHTELHLM 254 (467)
T ss_pred HHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhcCCee
Confidence 333333221 011122333344433334568999998 556655432 223466666666665555 788897 5999
Q ss_pred ccCCCCCCCCCC-------------------eeEEecCCch
Q psy12972 563 HADPHSGNDVNT-------------------WLYPVDLGDK 584 (1578)
Q Consensus 563 H~DpHPGNilv~-------------------~v~liDfG~~ 584 (1578)
|||+||.|||+. .++++|||..
T Consensus 255 HrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~ 295 (467)
T PTZ00284 255 HTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGC 295 (467)
T ss_pred cCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCcc
Confidence 999999999974 3788999954
|
|
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.3e-07 Score=110.42 Aligned_cols=136 Identities=18% Similarity=0.112 Sum_probs=95.5
Q ss_pred cccccccceEEEEEEec-CCC----EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGV----EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~----~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|+||+|+.+ +|+ .||+|+....... .....+
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~------------------------------------~~~~~~ 56 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSP------------------------------------KANKEI 56 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCH------------------------------------HHHHHH
Confidence 68999999999999965 454 6899977543210 011235
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
.+|+..+.++. +..-+.+..... ++..++||||++|.++.+........++...+...+.++. +..+|..|+
T Consensus 57 ~~e~~~l~~l~----h~~i~~~~~~~~--~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i 130 (279)
T cd05057 57 LDEAYVMASVD----HPHVVRLLGICL--SSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRL 130 (279)
T ss_pred HHHHHHHHhCC----CCCcceEEEEEe--cCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 66777776653 333344444443 3677899999999999886433233466777766666655 788999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|++|.||++. .+++.|||....
T Consensus 131 ~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 131 VHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred EecccCcceEEEcCCCeEEECCCccccc
Confidence 9999999999964 589999997643
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.2e-07 Score=108.68 Aligned_cols=138 Identities=14% Similarity=0.070 Sum_probs=90.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+++|.|++|+||+|+.+ +|+.||||......... . ..-.+.+|.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-------------------------~----------~~~~~~~e~ 50 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASR-------------------------R----------ERKAAEQEA 50 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCH-------------------------H----------HHHHHHHHH
Confidence 57899999999999965 68999999864221100 0 001234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.+++ +...+.+...+.......+|+|||++|.++.+...-. ...++...+...+.++. +..+|..|++|+
T Consensus 51 ~~l~~l~----~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~ 126 (257)
T cd08223 51 QLLSQLK----HPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHR 126 (257)
T ss_pred HHHHhCC----CCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 5444442 2222333333322223357999999999987764321 22356666666655555 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.||+++ .++++|||...
T Consensus 127 di~p~nil~~~~~~~~l~df~~~~ 150 (257)
T cd08223 127 DLKTQNVFLTRTNIIKVGDLGIAR 150 (257)
T ss_pred CCCchhEEEecCCcEEEecccceE
Confidence 9999999965 58999999754
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=98.66 E-value=6.7e-08 Score=113.08 Aligned_cols=140 Identities=17% Similarity=0.161 Sum_probs=86.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+...... .. ..++..|.
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~--------------------~~---------------~~~~~~e~ 50 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED--------------------GL---------------PLSTVREV 50 (288)
T ss_pred eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC--------------------CC---------------chHHHHHH
Confidence 46899999999999965 79999999876432110 00 00112333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC----CCceEEEEeccCCCcCCchhhH-hhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK----SSTRVLTTEFIDGVKISDKEGL-LEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~----~t~~VLVME~i~G~~l~d~~~l-~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+-+.+++. +.+...+.+-.++... ...-+++|||++| .+.+.... ...+++...+...+.+++ +..+|..|
T Consensus 51 ~~l~~l~~-~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 128 (288)
T cd07863 51 ALLKRLEA-FDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC 128 (288)
T ss_pred HHHHHhhh-cCCCCeeeeeeeeccccCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 33444332 1222222222222211 1234799999987 45444221 123466666666666655 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.|||+. .++++|||...
T Consensus 129 ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 129 IVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eecCCCCHHHEEECCCCCEEECccCccc
Confidence 99999999999965 48999999753
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=98.66 E-value=6.2e-08 Score=112.39 Aligned_cols=136 Identities=15% Similarity=0.073 Sum_probs=89.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||+|++|+||+|+.. +|+.||+|+..+..-..- ..+-.+..|+
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~----------------------------------~~~~~~~~e~ 52 (280)
T cd05581 7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKE----------------------------------KKVKYVKIEK 52 (280)
T ss_pred eeecCCCceEEEEEEEcCCCCEEEEEEechHhccch----------------------------------HHHHHHHHHH
Confidence 57999999999999976 799999999764211000 0011223344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
..+.++. .++ .+++++.- ..+..++||||++|.+|.+... ....++...+...+.+++ +..+|..|++|
T Consensus 53 ~~~~~l~----~~~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H 125 (280)
T cd05581 53 EVLTRLN----GHP--GIIKLYYTFQDEENLYFVLEYAPNGELLQYIR-KYGSLDEKCTRFYAAEILLALEYLHSKGIIH 125 (280)
T ss_pred HHHHhcc----cCC--CchhHHHHhcCCceEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 4443332 111 12222211 2245679999999999987643 223566666666655555 67899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|.||+++ .++++|||...
T Consensus 126 ~dl~~~ni~i~~~~~~~l~df~~~~ 150 (280)
T cd05581 126 RDLKPENILLDKDMHIKITDFGTAK 150 (280)
T ss_pred cCCCHHHeEECCCCCEEecCCcccc
Confidence 99999999975 58999999764
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >KOG0608|consensus | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.8e-08 Score=120.07 Aligned_cols=138 Identities=19% Similarity=0.313 Sum_probs=91.4
Q ss_pred hhccccCCcccccccceEEEEEEecC-CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHH
Q psy12972 401 QLFRSFDENPIAAASLAQVFRAVTKE-GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQ 479 (1578)
Q Consensus 401 ~iF~~fd~~PlasaSiaQVhrA~l~~-G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 479 (1578)
..|..+ ++||.|.||.|-.++--| ....|.|-+| +.|+ +.+.=...+..
T Consensus 629 SmFvki--k~iGvGAFGeV~Lv~KvDT~~lYAmKTLr-------KaDV---------------------l~rnQvaHVKA 678 (1034)
T KOG0608|consen 629 SMFVKI--KTIGVGAFGEVCLVRKVDTRALYAMKTLR-------KADV---------------------LMRNQVAHVKA 678 (1034)
T ss_pred cceEEE--eeecccccceeEEEeecchhhHHHHhhhH-------HHHH---------------------Hhhhhhhhhhh
Confidence 356666 899999999999887433 2233444322 1121 11222345667
Q ss_pred HHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCc--eEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHH---HHHH
Q psy12972 480 ELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSST--RVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFT---AFAE 554 (1578)
Q Consensus 480 ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~--~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~---~~l~ 554 (1578)
|-|...||.|- + |-+.|..+-.+ -+.|||||+|+.+-.+ |.+.|+=++++++-.+. ...+
T Consensus 679 ERDILAEADn~-----------W--VVrLyySFQDkdnLYFVMdYIPGGDmMSL--LIrmgIFeE~LARFYIAEltcAie 743 (1034)
T KOG0608|consen 679 ERDILAEADNE-----------W--VVRLYYSFQDKDNLYFVMDYIPGGDMMSL--LIRMGIFEEDLARFYIAELTCAIE 743 (1034)
T ss_pred hhhhHhhcCCc-----------c--eEEEEEEeccCCceEEEEeccCCccHHHH--HHHhccCHHHHHHHHHHHHHHHHH
Confidence 77777777552 3 33555444333 3689999999988766 56788888888884432 2378
Q ss_pred HHHHcCccccCCCCCCCCCC---eeEEecCCc
Q psy12972 555 QIFQTGFVHADPHSGNDVNT---WLYPVDLGD 583 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~---~v~liDfG~ 583 (1578)
.+|..||+|||+||.|||+. .+++.|||+
T Consensus 744 sVHkmGFIHRDiKPDNILIDrdGHIKLTDFGL 775 (1034)
T KOG0608|consen 744 SVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 775 (1034)
T ss_pred HHHhccceecccCccceEEccCCceeeeeccc
Confidence 99999999999999999953 366666663
|
|
| >KOG0585|consensus | Back alignment and domain information |
|---|
Probab=98.65 E-value=8.8e-08 Score=113.54 Aligned_cols=147 Identities=18% Similarity=0.116 Sum_probs=94.2
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-||+|++|.|-+|+. -+|+-|||||....-.. ..+.++.-- ...+..--+-++|.
T Consensus 103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~---------------~~~~~~~~~--------a~~~~~~ekv~~EI 159 (576)
T KOG0585|consen 103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKELR---------------RQYGFPRQP--------AMKLMPIEKVRREI 159 (576)
T ss_pred hhhcCCccceEEEEeecCCCcEEEEEeechhhhh---------------hhccccccc--------ccccCcHHHHHHHH
Confidence 4589999999999995 48999999998532100 011111000 00000011346677
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCc-eEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHH-HHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSST-RVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLF-TAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~-~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~-~~~--l~~i~~~G~vH 563 (1578)
..+.++. |..-|..-+|+.+-.++ -+||.||+.+..+....... .-++. .-++..+ ++. ++.+|.+|++|
T Consensus 160 ailKkl~----H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~-~els~-~~Ar~ylrDvv~GLEYLH~QgiiH 233 (576)
T KOG0585|consen 160 AILKKLH----HPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDK-PELSE-QQARKYLRDVVLGLEYLHYQGIIH 233 (576)
T ss_pred HHHHhcC----CcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCc-ccccH-HHHHHHHHHHHHHHHHHHhcCeec
Confidence 7777765 34456777777766544 56999999998887642211 11222 2333333 333 89999999999
Q ss_pred cCCCCCCCCCC---eeEEecCCch
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~ 584 (1578)
||+||.|+|++ .+++-|||-.
T Consensus 234 RDIKPsNLLl~~~g~VKIsDFGVs 257 (576)
T KOG0585|consen 234 RDIKPSNLLLSSDGTVKISDFGVS 257 (576)
T ss_pred cccchhheEEcCCCcEEeecccee
Confidence 99999999965 6999999954
|
|
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.1e-07 Score=113.08 Aligned_cols=135 Identities=11% Similarity=0.090 Sum_probs=86.6
Q ss_pred CCcccccccceEEEEEEec---CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 407 DENPIAAASLAQVFRAVTK---EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 407 d~~PlasaSiaQVhrA~l~---~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+...||.|++|.||+|+.+ +++.||||+....-.. .+.
T Consensus 5 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~---------------------------------------~~~ 45 (317)
T cd07868 5 EGCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS---------------------------------------MSA 45 (317)
T ss_pred cccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc---------------------------------------HHH
Confidence 3467999999999999865 5689999976431100 012
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCc-eEEEEeccCCCcCCchhhHh--------hcCCCHHHHHHHHHHHH--
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSST-RVLTTEFIDGVKISDKEGLL--------EKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~-~VLVME~i~G~~l~d~~~l~--------~~~~~~~~v~~~l~~~~-- 552 (1578)
.+|++.+.++. +...+.+-..+...... -+|+|||++| .+.++.... ...++...+...+.+++
T Consensus 46 ~~E~~~l~~l~----h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a 120 (317)
T cd07868 46 CREIALLRELK----HPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDG 120 (317)
T ss_pred HHHHHHHHhcC----CCCCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHH
Confidence 34555555542 33334444544333333 4699999976 444432211 11244444544445544
Q ss_pred HHHHHHcCccccCCCCCCCCC-------CeeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVN-------TWLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv-------~~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.|||+ +.++++|||...
T Consensus 121 l~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 121 IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred HHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 788999999999999999997 259999999764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.5e-07 Score=107.77 Aligned_cols=137 Identities=16% Similarity=0.123 Sum_probs=90.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.|++|+....-... ...-++.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-----------------------------------~~~~~~~~e~ 50 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNR-----------------------------------REREEAIDEA 50 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCH-----------------------------------HHHHHHHHHH
Confidence 57999999999999975 79999999764211000 0112345556
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.+++ +...+.+...+ ......+|||||++|.+|.++..-. ...++...+...+.+++ +..+|..|++|+
T Consensus 51 ~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~ 125 (256)
T cd08529 51 RVLAKLD----SSYIIRYYESF-LDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHR 125 (256)
T ss_pred HHHHhcC----CCCeehheeee-ccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 5555443 22212222222 1224568999999999998874322 23456666655555544 678899999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.||+++ .+++.|||...
T Consensus 126 dl~~~nili~~~~~~~l~df~~~~ 149 (256)
T cd08529 126 DIKSLNLFLDAYDNVKIGDLGVAK 149 (256)
T ss_pred CCCcceEEEeCCCCEEEcccccce
Confidence 9999999965 58999999654
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.3e-07 Score=109.05 Aligned_cols=133 Identities=18% Similarity=0.102 Sum_probs=92.1
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|...++..||||+.+++-.. .-+|.+|++
T Consensus 12 ~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~--------------------------------------~~~~~~e~~ 53 (260)
T cd05073 12 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS--------------------------------------VEAFLAEAN 53 (260)
T ss_pred eEecCccceEEEEEEecCCccEEEEecCCChhH--------------------------------------HHHHHHHHH
Confidence 679999999999999888889999987653210 012455655
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.++++. +...+.+...+.+ ...+++|||++|.++.+...-. ....+...+...+.++. +..+|..|++|+|
T Consensus 54 ~l~~l~----~~~i~~~~~~~~~--~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~d 127 (260)
T cd05073 54 VMKTLQ----HDKLVKLHAVVTK--EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD 127 (260)
T ss_pred HHHhcC----CCCcceEEEEEcC--CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence 555443 3334555555543 5568999999999998764321 12244444444444444 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .+++.|||...
T Consensus 128 l~p~ni~i~~~~~~~l~d~~~~~ 150 (260)
T cd05073 128 LRAANILVSASLVCKIADFGLAR 150 (260)
T ss_pred cCcceEEEcCCCcEEECCCccee
Confidence 999999965 48889999654
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.8e-07 Score=107.18 Aligned_cols=134 Identities=19% Similarity=0.243 Sum_probs=92.8
Q ss_pred cccccccceEEEEEEecC-CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKE-GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~-G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.|++|++|+||+|+..+ |+.||+|+...... .-++.+|.
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---------------------------------------~~~~~~e~ 49 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED---------------------------------------LQEIIKEI 49 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH---------------------------------------HHHHHHHH
Confidence 468999999999999774 89999998743210 01344555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+...+.+ ....+++|||++|.+|.++.......++...+...+.+++ +..+|..|++|+|
T Consensus 50 ~~~~~l----~~~~i~~~~~~~~~-~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~d 124 (256)
T cd06612 50 SILKQC----DSPYIVKYYGSYFK-NTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRD 124 (256)
T ss_pred HHHHhC----CCCcEeeeeeeeec-CCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 555554 22222333333322 2445799999999999987544445566666666555554 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+||++. .+++.|||....
T Consensus 125 l~~~ni~~~~~~~~~l~dfg~~~~ 148 (256)
T cd06612 125 IKAGNILLNEEGQAKLADFGVSGQ 148 (256)
T ss_pred CCcceEEECCCCcEEEcccccchh
Confidence 999999965 588999997644
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.4e-07 Score=116.51 Aligned_cols=46 Identities=17% Similarity=0.090 Sum_probs=34.4
Q ss_pred CHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 540 SLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 540 ~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+...+...+.++. +..+|..|++|+|++|.|||++ .++++|||...
T Consensus 235 ~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~ 285 (400)
T cd05105 235 TTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLAR 285 (400)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcce
Confidence 3333444444443 6789999999999999999965 48999999764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.4e-07 Score=109.06 Aligned_cols=134 Identities=15% Similarity=0.090 Sum_probs=90.8
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..++..||||+.++.... +-+|.+|++
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~--------------------------------------~~~~~~E~~ 53 (262)
T cd05071 12 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--------------------------------------PEAFLQEAQ 53 (262)
T ss_pred eecCCCCCCcEEEEEecCCceEEEEecccCccC--------------------------------------HHHHHHHHH
Confidence 358999999999999877778999987642110 013456666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++. +...+.+...+. ....++||||++|.++.++.... ...++...+...+.+++ +..+|..|++|+|
T Consensus 54 ~l~~l~----~~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~d 127 (262)
T cd05071 54 VMKKLR----HEKLVQLYAVVS--EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 127 (262)
T ss_pred HHHhCC----CCCcceEEEEEC--CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence 666653 222233333332 23468999999999998764321 12345555555554444 6779999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+||++. .++++|||....
T Consensus 128 l~p~Nill~~~~~~~L~dfg~~~~ 151 (262)
T cd05071 128 LRAANILVGENLVCKVADFGLARL 151 (262)
T ss_pred cCcccEEEcCCCcEEeccCCceee
Confidence 999999965 488999997643
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=98.64 E-value=9.8e-08 Score=116.21 Aligned_cols=134 Identities=15% Similarity=0.156 Sum_probs=84.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||+|++|.||+|... +|+.||||+........- ..-++.+|.
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------------~~~~~~~E~ 74 (364)
T cd07875 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT-----------------------------------HAKRAYREL 74 (364)
T ss_pred EEeecCCCeEEEEEEECCCCcEEEEEEeCccccCch-----------------------------------hHHHHHHHH
Confidence 67999999999999864 789999998753321100 000122333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC-----CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD-----KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~-----~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
..++.+ .+...+.+..++.. .....++||||++|. +.+. ....++...+...+.+++ +..+|..|
T Consensus 75 ~~l~~l----~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 146 (364)
T cd07875 75 VLMKCV----NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQV---IQMELDHERMSYLLYQMLCGIKHLHSAG 146 (364)
T ss_pred HHHHhc----CCCCccccceeecccccccccCeEEEEEeCCCCC-HHHH---HHhcCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 333333 22222222222221 112357999999873 3332 123456665555555554 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.|||+. .++++|||...
T Consensus 147 ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 174 (364)
T cd07875 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR 174 (364)
T ss_pred eecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence 99999999999975 59999999764
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0611|consensus | Back alignment and domain information |
|---|
Probab=98.64 E-value=5.9e-08 Score=112.12 Aligned_cols=135 Identities=19% Similarity=0.186 Sum_probs=89.8
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-+|.|.+|.|-+|.. +.|+.||||..+.+--+. +.||--+ ++|.
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkd-eqDlvhI---------------------------------RREI 104 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKD-EQDLVHI---------------------------------RREI 104 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhccc-HHHHHHH---------------------------------HHHH
Confidence 5689999999999996 689999999776442110 1222222 3333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH---HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF---AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~---l~~i~~~G~vH~ 564 (1578)
+-+..+ .+...|.|-.|+. -..+-||||||..|+.|.|+.. +...++..+ ++.+++.+ ....|.++++|+
T Consensus 105 eIMSsL----NHPhII~IyEVFE-NkdKIvivMEYaS~GeLYDYiS-er~~LsErE-aRhfFRQIvSAVhYCHknrVvHR 177 (668)
T KOG0611|consen 105 EIMSSL----NHPHIIQIYEVFE-NKDKIVIVMEYASGGELYDYIS-ERGSLSERE-ARHFFRQIVSAVHYCHKNRVVHR 177 (668)
T ss_pred HHHhhc----CCCceeehhhhhc-CCceEEEEEEecCCccHHHHHH-HhccccHHH-HHHHHHHHHHHHHHHhhccceec
Confidence 333222 2233355555553 3567799999999999999854 233344333 33333333 567899999999
Q ss_pred CCCCCCCCCC---eeEEecCCch
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~ 584 (1578)
|++-.|||+. .+++.|||..
T Consensus 178 DLKLENILLD~N~NiKIADFGLS 200 (668)
T KOG0611|consen 178 DLKLENILLDQNNNIKIADFGLS 200 (668)
T ss_pred ccchhheeecCCCCeeeeccchh
Confidence 9999999964 4899999975
|
|
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.5e-07 Score=109.15 Aligned_cols=135 Identities=21% Similarity=0.233 Sum_probs=90.2
Q ss_pred cccccccceEEEEEEec-CC---CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EG---VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G---~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+-||.|++|.||+|+.+ +| ..||||+......... .-+|.
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~ 53 (269)
T cd05065 10 EVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQ------------------------------------RRDFL 53 (269)
T ss_pred eEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHH------------------------------------HHHHH
Confidence 56899999999999975 34 3699998764321100 01245
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
.|+..+.++. +...+.+...+ .-....++||||++|.+|.+........++...+...+.+++ +..+|..|++
T Consensus 54 ~e~~~l~~l~----h~ni~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~ 128 (269)
T cd05065 54 SEASIMGQFD----HPNIIHLEGVV-TKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYV 128 (269)
T ss_pred HHHHHHHhCC----CcCcceEEEEE-CCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 5655555442 22223333333 223456899999999999876543334466666666555544 6788999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCch
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~ 584 (1578)
|+|++|.||++. .+++.|||..
T Consensus 129 H~dl~p~nili~~~~~~kl~dfg~~ 153 (269)
T cd05065 129 HRDLAARNILVNSNLVCKVSDFGLS 153 (269)
T ss_pred ecccChheEEEcCCCcEEECCCccc
Confidence 999999999964 4888999965
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=98.64 E-value=9.3e-08 Score=110.21 Aligned_cols=138 Identities=14% Similarity=0.187 Sum_probs=91.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|..+ +|+.||+|+........ .+-++.+|.
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~------------------------------------~~~~~~~e~ 50 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEA------------------------------------IQKQILREL 50 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChH------------------------------------HHHHHHHHH
Confidence 57899999999999976 79999999876543211 011223444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~vH~ 564 (1578)
..+.++. +..-+.+...+. ....-+|+|||++|.+|.++.......++...+...+.+++ +..+|. .|++|+
T Consensus 51 ~~l~~~~----~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~ 125 (265)
T cd06605 51 DILHKCN----SPYIVGFYGAFY-NNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHR 125 (265)
T ss_pred HHHHHCC----CCchhhhheeee-cCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecC
Confidence 4444332 111122222221 12456799999999999887543224456666555555554 678899 999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|++|+||++. .++++|||....+
T Consensus 126 dl~~~ni~~~~~~~~~l~d~g~~~~~ 151 (265)
T cd06605 126 DVKPSNILVNSRGQIKLCDFGVSGQL 151 (265)
T ss_pred CCCHHHEEECCCCCEEEeecccchhh
Confidence 9999999965 5899999976544
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=98.64 E-value=2e-07 Score=108.75 Aligned_cols=135 Identities=19% Similarity=0.162 Sum_probs=89.6
Q ss_pred cccccccceEEEEEEe-cCCC----EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGV----EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~----~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|.||+|+. .+|+ +||||+.+...... .+-++
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~------------------------------------~~~~~ 56 (279)
T cd05109 13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPK------------------------------------ANKEI 56 (279)
T ss_pred eecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHH------------------------------------HHHHH
Confidence 6799999999999985 4665 48999875432110 01123
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEee-CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILW-DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~-~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|+..+.++. ++.+ ++++. .......++|||++|.++.+...-....++...+...+.++. +..+|..|
T Consensus 57 ~~e~~~l~~~~-----~~~i--~~~~~~~~~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 129 (279)
T cd05109 57 LDEAYVMAGVG-----SPYV--CRLLGICLTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR 129 (279)
T ss_pred HHHHHHHHhcC-----CCCC--ceEEEEEcCCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 44554444432 2222 22221 123456799999999998776432223466666666666665 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|+|||+. .++++|||....
T Consensus 130 iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 130 LVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred eeccccccceEEEcCCCcEEECCCCceee
Confidence 99999999999975 489999997643
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.2e-07 Score=110.44 Aligned_cols=136 Identities=18% Similarity=0.188 Sum_probs=90.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
..|++|++|+||+|+.+ +|+.||+|+........ . . +-.+..|+
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~--------------------~---------~------~~~~~~e~ 51 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDP--------------------V---------I------KKIALREI 51 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCc--------------------c---------c------cHHHHHHH
Confidence 46899999999999976 69999999875321100 0 0 00124455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+...+. .....++||||++|..+..+.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 52 ~~l~~~~----h~~i~~~~~~~~-~~~~~~~v~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~d 125 (286)
T cd07847 52 RMLKQLK----HPNLVNLIEVFR-RKRKLHLVFEYCDHTVLNELEK-NPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRD 125 (286)
T ss_pred HHHHhCC----CCCEeeeeeEEe-eCCEEEEEEeccCccHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence 5444442 222233333332 2345679999999987766532 223466666666666665 7789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .+++.|||...
T Consensus 126 l~p~nil~~~~~~~~l~dfg~~~ 148 (286)
T cd07847 126 VKPENILITKQGQIKLCDFGFAR 148 (286)
T ss_pred CChhhEEEcCCCcEEECccccce
Confidence 999999965 48888998764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd02999 PDI_a_ERp44_like PDIa family, endoplasmic reticulum protein 44 (ERp44)-like subfamily; composed of uncharacterized PDI-like eukaryotic proteins containing only one redox active TRX (a) domain with a CXXS motif, similar to ERp44 | Back alignment and domain information |
|---|
Probab=98.63 E-value=1e-08 Score=101.41 Aligned_cols=63 Identities=16% Similarity=0.296 Sum_probs=46.4
Q ss_pred ccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeec-c---cCccccccCCccccccccccccCccccccc
Q psy12972 763 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYD-L---FGTTDGFSGQDSASRNFHNHMYNPFDDVFS 838 (1578)
Q Consensus 763 ~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~-~---~~~~~~i~g~~~~~~~~~~i~~~Ptiklf~ 838 (1578)
..+++++|.||||||+||++++|.|+++++.+.+..+ +.++.+ . +++. .++..+||+.+|.
T Consensus 16 ~~g~~vlV~F~a~WC~~C~~~~p~l~~la~~~~~~~~--~~vd~~~~~~~l~~~-------------~~V~~~PT~~lf~ 80 (100)
T cd02999 16 NREDYTAVLFYASWCPFSASFRPHFNALSSMFPQIRH--LAIEESSIKPSLLSR-------------YGVVGFPTILLFN 80 (100)
T ss_pred cCCCEEEEEEECCCCHHHHhHhHHHHHHHHHhccCce--EEEECCCCCHHHHHh-------------cCCeecCEEEEEc
Confidence 4678999999999999999999999999999976433 333222 1 2222 3345559999988
Q ss_pred cc
Q psy12972 839 EG 840 (1578)
Q Consensus 839 ~~ 840 (1578)
.+
T Consensus 81 ~g 82 (100)
T cd02999 81 ST 82 (100)
T ss_pred CC
Confidence 76
|
CXXS is still a redox active motif; however, the mixed disulfide formed with the substrate is more stable than those formed by CXXC motif proteins. PDI-related proteins are usually involved in the oxidative protein folding in the ER by acting as catalysts and folding assistants. ERp44 is involved in thiol-mediated retention in the ER. |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.2e-07 Score=118.63 Aligned_cols=148 Identities=17% Similarity=0.143 Sum_probs=89.1
Q ss_pred HHHhCCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHH
Q psy12972 392 LEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVI 470 (1578)
Q Consensus 392 ~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~ 470 (1578)
..+.+.....-|.-. +.||.|++|.||+|+.. +|+.||||+...+...
T Consensus 57 ~~~~~~~~~~~y~~~--~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~----------------------------- 105 (440)
T PTZ00036 57 DNDINRSPNKSYKLG--NIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQY----------------------------- 105 (440)
T ss_pred hhhhccCcCCeEEEe--EEEEeCCCEEEEEEEECCCCCEEEEEEEecCcch-----------------------------
Confidence 333333333334433 67999999999999975 7899999976321100
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCC-----Cc--eEEEEeccCCCcCCchhh-H--hhcCCC
Q psy12972 471 NELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKS-----ST--RVLTTEFIDGVKISDKEG-L--LEKGFS 540 (1578)
Q Consensus 471 ~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~-----t~--~VLVME~i~G~~l~d~~~-l--~~~~~~ 540 (1578)
..+|...+.++ .+...|.+...+..-+ .. -+|||||++| .+.+... . ....++
T Consensus 106 ------------~~~Ei~il~~l----~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~ 168 (440)
T PTZ00036 106 ------------KNRELLIMKNL----NHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALP 168 (440)
T ss_pred ------------HHHHHHHHHhc----CCCCCcceeeeEeecccccCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCC
Confidence 01244444433 2333343333332111 11 2489999987 3433321 1 123455
Q ss_pred HHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC----eeEEecCCchhhh
Q psy12972 541 LADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT----WLYPVDLGDKFRL 587 (1578)
Q Consensus 541 ~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~----~v~liDfG~~~~l 587 (1578)
...+...+.+++ +..+|..|++|||++|.|||+. .++++|||....+
T Consensus 169 ~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~ 221 (440)
T PTZ00036 169 LFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNL 221 (440)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhc
Confidence 555544444444 7889999999999999999974 3899999987543
|
|
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.7e-07 Score=109.49 Aligned_cols=138 Identities=17% Similarity=0.095 Sum_probs=87.5
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|+||+|+.. +|+.||||+..+........ +.-+..|..
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~----------------------------------~~~~~~~~~ 46 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG----------------------------------ETLALNERI 46 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchh----------------------------------HHHHHHHHH
Confidence 3799999999999864 79999999876431110000 001122332
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
.++..+. . +++. ++..+..+ ....++||||+.|..|.+... ....++...+...+.+++ +..+|..|++|+
T Consensus 47 ~~~~~~~-~-~~~~--i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~ 121 (278)
T cd05606 47 MLSLVST-G-DCPF--IVCMSYAFHTPDKLSFILDLMNGGDLHYHLS-QHGVFSEAEMRFYAAEIILGLEHMHNRFVVYR 121 (278)
T ss_pred HHHHHHh-C-CCCc--EeeeeeeeecCCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcC
Confidence 2322222 1 2232 23333222 234579999999999977542 223456666666555555 678999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.||++. .++++|||....
T Consensus 122 di~p~nili~~~~~~kl~dfg~~~~ 146 (278)
T cd05606 122 DLKPANILLDEHGHVRISDLGLACD 146 (278)
T ss_pred CCCHHHEEECCCCCEEEccCcCccc
Confidence 9999999965 589999997643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.5e-07 Score=109.01 Aligned_cols=137 Identities=20% Similarity=0.211 Sum_probs=92.3
Q ss_pred cccccccceEEEEEEec-C---CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK-E---GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~---G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+.+ + +..||||..++..... ..-+|.
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~------------------------------------~~~~~~ 53 (267)
T cd05066 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEK------------------------------------QRRDFL 53 (267)
T ss_pred eeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHH------------------------------------HHHHHH
Confidence 57899999999999864 3 3479999876542110 011345
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
.|...+.++ .+...+.+...+. .....+|||||++|.+|.+........++...+...+.++. +..+|..|++
T Consensus 54 ~e~~~l~~l----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~ 128 (267)
T cd05066 54 SEASIMGQF----DHPNIIHLEGVVT-KSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYV 128 (267)
T ss_pred HHHHHHHhC----CCCCcceEEEEEe-cCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 555555544 2333344444443 23456899999999999887543333456666666555544 6788999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+|++|.|||+. .++++|||....
T Consensus 129 h~dlkp~nili~~~~~~~l~dfg~~~~ 155 (267)
T cd05066 129 HRDLAARNILVNSNLVCKVSDFGLSRV 155 (267)
T ss_pred ehhhchhcEEECCCCeEEeCCCCcccc
Confidence 999999999965 488999997643
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >PTZ00100 DnaJ chaperone protein; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.1e-08 Score=99.75 Aligned_cols=55 Identities=27% Similarity=0.373 Sum_probs=48.8
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILS 690 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~ 690 (1578)
.+...++|++|||++++|.+|||++||++++++|||+++ ..+.|++|++||++|.
T Consensus 61 ~Ms~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG---s~~~~~kIneAyevL~ 115 (116)
T PTZ00100 61 PMSKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGG---STYIASKVNEAKDLLL 115 (116)
T ss_pred CCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC---CHHHHHHHHHHHHHHh
Confidence 344569999999999999999999999999999999864 3678999999999985
|
|
| >KOG0592|consensus | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.3e-07 Score=114.01 Aligned_cols=133 Identities=19% Similarity=0.231 Sum_probs=84.5
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH-HHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF-LNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf-~~E 486 (1578)
+-||-||+.+|++|+. .+|+++||||.-.. . |++|= -.+| .+|
T Consensus 79 ~~lGeGSYStV~~A~~~~t~keYAiKVl~K~----------~-------------------Iike~------KvkYV~~E 123 (604)
T KOG0592|consen 79 KILGEGSYSTVVLAREKATGKEYAIKVLDKR----------Y-------------------IIKEK------KVKYVTRE 123 (604)
T ss_pred heeccccceeEEEeeecCCCceeeHhhhhHH----------H-------------------HHhhc------ccchhhHH
Confidence 4599999999999995 48999999987311 0 00100 0111 233
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcC-CCHHH---HHHHHHHHHHHHHHHcC
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKG-FSLAD---VDRKLFTAFAEQIFQTG 560 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~-~~~~~---v~~~l~~~~l~~i~~~G 560 (1578)
-..+.++. ++|+|. +.|..+ ...-+.|+||.+++.|-++. ...| ++... -+..++.+ ++.||..|
T Consensus 124 k~~l~~L~----~hPgiv--kLy~TFQD~~sLYFvLe~A~nGdll~~i--~K~Gsfde~caR~YAAeIldA-leylH~~G 194 (604)
T KOG0592|consen 124 KEALTQLS----GHPGIV--KLYFTFQDEESLYFVLEYAPNGDLLDLI--KKYGSFDETCARFYAAEILDA-LEYLHSNG 194 (604)
T ss_pred HHHHHHhh----CCCCeE--EEEEEeecccceEEEEEecCCCcHHHHH--HHhCcchHHHHHHHHHHHHHH-HHHHHhcC
Confidence 33444443 444432 333222 23457999999999988764 3333 33211 22233332 88999999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+||||+||.|||+. .+.+.|||.+-
T Consensus 195 IIHRDlKPENILLd~dmhikITDFGsAK 222 (604)
T KOG0592|consen 195 IIHRDLKPENILLDKDGHIKITDFGSAK 222 (604)
T ss_pred ceeccCChhheeEcCCCcEEEeeccccc
Confidence 99999999999954 69999999763
|
|
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.4e-07 Score=111.36 Aligned_cols=133 Identities=16% Similarity=0.129 Sum_probs=89.6
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+........ .-.+.+|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-------------------------------------~~~~~~e~ 67 (297)
T cd06656 25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPK-------------------------------------KELIINEI 67 (297)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEEEecCccch-------------------------------------HHHHHHHH
Confidence 5799999999999996 489999999764321100 00123444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++ .+..-+.+...+ ......++||||++|.++.+.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 68 ~~l~~~----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~d 140 (297)
T cd06656 68 LVMREN----KNPNIVNYLDSY-LVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALDFLHSNQVIHRD 140 (297)
T ss_pred HHHHhC----CCCCEeeEEEEE-ecCCEEEEeecccCCCCHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 444332 222222222222 2345678999999999998863 344566666666555554 7789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 141 L~p~Nili~~~~~~~l~Dfg~~~ 163 (297)
T cd06656 141 IKSDNILLGMDGSVKLTDFGFCA 163 (297)
T ss_pred CCHHHEEECCCCCEEECcCccce
Confidence 999999965 58999999653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.6e-07 Score=107.24 Aligned_cols=138 Identities=16% Similarity=0.159 Sum_probs=92.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||+|++|+||+|+.. +|+.||||........ +... -++..|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------------------------~~~~------~~~~~e~ 50 (254)
T cd06627 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-----------------------------EEAL------KSIMQEI 50 (254)
T ss_pred eEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-----------------------------HHHH------HHHHHHH
Confidence 68999999999999865 7899999988643211 0000 1234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.+++ +...+.+..... .....+++|||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 51 ~~l~~l~----~~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~d 124 (254)
T cd06627 51 DLLKNLK----HPNIVKYIGSIE-TSDSLYIILEYAENGSLRQIIK-KFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRD 124 (254)
T ss_pred HHHHhCC----CCCccEEEEEEE-eCCEEEEEEecCCCCcHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHhhCCcccCC
Confidence 5555543 222222222222 2345689999999999987643 224566666655555555 6789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|+||++. .+++.|||....+
T Consensus 125 l~p~ni~i~~~~~~~l~d~~~~~~~ 149 (254)
T cd06627 125 IKAANILTTKDGVVKLADFGVATKL 149 (254)
T ss_pred CCHHHEEECCCCCEEEeccccceec
Confidence 999999965 4899999976443
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.6e-07 Score=109.47 Aligned_cols=137 Identities=18% Similarity=0.169 Sum_probs=91.1
Q ss_pred cccccccceEEEEEEecC------CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTKE------GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~------G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|...+ +..||+|........ ..+.+
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~------------------------------------~~~~~ 55 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSE------------------------------------QDESD 55 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCH------------------------------------HHHHH
Confidence 579999999999999753 578899976432211 12335
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh------cCCCHHHHHHHHHHHH--HH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE------KGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~------~~~~~~~v~~~l~~~~--l~ 554 (1578)
|.+|...+.++. +..-+.+-... .-....+|||||++|.+|.++..-.. ..++...+...+.+++ +.
T Consensus 56 ~~~e~~~l~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~ 130 (277)
T cd05036 56 FLMEALIMSKFN----HQNIVRLIGVS-FERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCK 130 (277)
T ss_pred HHHHHHHHHhCC----CCCEeeEEEEE-ccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 566666665543 22222222222 22345689999999999988643211 1355556656555555 68
Q ss_pred HHHHcCccccCCCCCCCCCC------eeEEecCCchhh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT------WLYPVDLGDKFR 586 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~------~v~liDfG~~~~ 586 (1578)
.+|..|++|+|++|.||++. .++++|||....
T Consensus 131 ~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~ 168 (277)
T cd05036 131 YLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARD 168 (277)
T ss_pred HHHHCCEeecccchheEEEeccCCCcceEeccCccccc
Confidence 89999999999999999974 278899997643
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.8e-07 Score=109.93 Aligned_cols=138 Identities=20% Similarity=0.142 Sum_probs=93.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|... +|+.||||+.++.-... ....-.+.+|+
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~----------------------------------~~~~~~~~~e~ 52 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVK----------------------------------LKQVEHVLNEK 52 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh----------------------------------hhHHHHHHHHH
Confidence 67999999999999965 79999999886421100 00112245666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+...+.+ ....++||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 53 ~~l~~l~----h~~i~~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~-~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~d 126 (290)
T cd05580 53 RILQSIR----HPFLVNLYGSFQD-DSNLYLVMEYVPGGELFSHLR-KSGRFPEPVARFYAAQVVLALEYLHSLDIVYRD 126 (290)
T ss_pred HHHHhCC----CCCccceeeEEEc-CCeEEEEEecCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence 6665553 2222334343322 345689999999999987643 224566666655555544 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||++. .++++|||....
T Consensus 127 l~p~nili~~~~~~kl~dfg~~~~ 150 (290)
T cd05580 127 LKPENLLLDSDGYIKITDFGFAKR 150 (290)
T ss_pred CCHHHEEECCCCCEEEeeCCCccc
Confidence 999999965 589999997543
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=98.62 E-value=2e-07 Score=109.34 Aligned_cols=138 Identities=17% Similarity=0.190 Sum_probs=90.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.|++|++|.||+|+.. +|+.||||+..+.-.. .-++..|.
T Consensus 28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~--------------------------------------~~~~~~e~ 69 (291)
T cd06639 28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDV--------------------------------------DEEIEAEY 69 (291)
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEecccccH--------------------------------------HHHHHHHH
Confidence 57999999999999974 7999999987542100 00123444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC----CCceEEEEeccCCCcCCchhhH---hhcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK----SSTRVLTTEFIDGVKISDKEGL---LEKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~----~t~~VLVME~i~G~~l~d~~~l---~~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
+.+.++. .+..-+.+...+... ....+|||||++|.+|.++... ....++...+...+.+++ ++.+|.
T Consensus 70 ~~l~~l~---~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~ 146 (291)
T cd06639 70 NILQSLP---NHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN 146 (291)
T ss_pred HHHHHhc---CCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4444442 122223333332211 2356899999999999876431 123355555555555544 788999
Q ss_pred cCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 559 TGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
.|++|+|++|+||++. .++++|||....+
T Consensus 147 ~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~ 178 (291)
T cd06639 147 NRIIHRDVKGNNILLTTEGGVKLVDFGVSAQL 178 (291)
T ss_pred CCeeccCCCHHHEEEcCCCCEEEeecccchhc
Confidence 9999999999999965 4899999976443
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=8.3e-08 Score=116.71 Aligned_cols=128 Identities=13% Similarity=0.077 Sum_probs=85.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +++.||+|+...+.. ..|+
T Consensus 72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~-------------------------------------------~~E~ 108 (357)
T PHA03209 72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTT-------------------------------------------LIEA 108 (357)
T ss_pred EEecCCCCeEEEEEEECCCCceEEEEeCCcccc-------------------------------------------HHHH
Confidence 68999999999999975 688999998543211 1233
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++ .+...+.+...+. .....++|||++.| .+.+........++...+...+.+++ +..+|..|++|+|
T Consensus 109 ~~l~~l----~h~~iv~~~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrD 182 (357)
T PHA03209 109 MLLQNV----NHPSVIRMKDTLV-SGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRD 182 (357)
T ss_pred HHHHhC----CCCCCcChhheEE-eCCeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 333333 2222233322222 12346799999976 44444322234566666666665555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 183 lkp~Nill~~~~~~kl~DfG~a~ 205 (357)
T PHA03209 183 VKTENIFINDVDQVCIGDLGAAQ 205 (357)
T ss_pred CCHHHEEECCCCCEEEecCcccc
Confidence 999999965 58999999763
|
|
| >cd02996 PDI_a_ERp44 PDIa family, endoplasmic reticulum protein 44 (ERp44) subfamily; ERp44 is an ER-resident protein, induced during stress, involved in thiol-mediated ER retention | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.1e-08 Score=102.34 Aligned_cols=77 Identities=22% Similarity=0.356 Sum_probs=54.2
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-----Cc--ceeeeeec-ccCccccccCCcc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-----GV--GFFTVHYD-LFGTTDGFSGQDS 820 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-----~v--g~v~~~~~-~~~~~~~i~g~~~ 820 (1578)
.++..||+..+ +++++++|.||||||++|+++.|.|+++|+.+++. .+ +.++|..+ .+|+..++.++
T Consensus 5 ~l~~~~f~~~i---~~~~~vlv~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~-- 79 (108)
T cd02996 5 SLTSGNIDDIL---QSAELVLVNFYADWCRFSQMLHPIFEEAAAKIKEEFPDAGKVVWGKVDCDKESDIADRYRINKY-- 79 (108)
T ss_pred EcCHhhHHHHH---hcCCEEEEEEECCCCHHHHhhHHHHHHHHHHHhhccCCCCcEEEEEEECCCCHHHHHhCCCCcC--
Confidence 45667888765 34678999999999999999999999999988642 12 33333221 14444455444
Q ss_pred ccccccccccCcccccccccc
Q psy12972 821 ASRNFHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 821 ~~~~~~~i~~~Ptiklf~~~~ 841 (1578)
||+.+|+.|.
T Consensus 80 -----------Ptl~~~~~g~ 89 (108)
T cd02996 80 -----------PTLKLFRNGM 89 (108)
T ss_pred -----------CEEEEEeCCc
Confidence 9998888764
|
It contains an N-terminal TRX domain, similar to that of PDIa, with a CXFS motif followed by two redox inactive TRX-like domains, homologous to the b and b' domains of PDI. The CXFS motif in the N-terminal domain allows ERp44 to form stable reversible mixed disulfides with its substrates. Through this activity, ERp44 mediates the ER localization of Ero1alpha, a protein that oxidizes protein disulfide isomerases into their active form. ERp44 also prevents the secretion of unassembled cargo protein with unpaired cysteines. It also modulates the activity of inositol 1,4,5-triphosphate type I receptor (IP3R1), an intracellular channel protein that mediates calcium release from the ER to the cytosol. |
| >cd02994 PDI_a_TMX PDIa family, TMX subfamily; composed of proteins similar to the TRX-related human transmembrane protein, TMX | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.4e-08 Score=100.31 Aligned_cols=75 Identities=23% Similarity=0.345 Sum_probs=51.4
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCcccccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRN 824 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~ 824 (1578)
..++..+|+..+ + +.|+|.||||||++|+++.|.|+++++.+++.++.+...+++. +|+.
T Consensus 4 ~~l~~~~f~~~~-~----~~~lv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~------------ 66 (101)
T cd02994 4 VELTDSNWTLVL-E----GEWMIEFYAPWCPACQQLQPEWEEFADWSDDLGINVAKVDVTQEPGLSGR------------ 66 (101)
T ss_pred EEcChhhHHHHh-C----CCEEEEEECCCCHHHHHHhHHHHHHHHhhccCCeEEEEEEccCCHhHHHH------------
Confidence 345677888755 2 2389999999999999999999999998875544333332221 2223
Q ss_pred ccccccCccccccccc
Q psy12972 825 FHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 825 ~~~i~~~Ptiklf~~~ 840 (1578)
..+..+||+.++.+|
T Consensus 67 -~~i~~~Pt~~~~~~g 81 (101)
T cd02994 67 -FFVTALPTIYHAKDG 81 (101)
T ss_pred -cCCcccCEEEEeCCC
Confidence 334455888777655
|
TMX is a type I integral membrane protein; the N-terminal redox active TRX domain is present in the endoplasmic reticulum (ER) lumen while the C-terminus is oriented towards the cytoplasm. It is expressed in many cell types and its active site motif (CPAC) is unique. In vitro, TMX reduces interchain disulfides of insulin and renatures inactive RNase containing incorrect disulfide bonds. The C. elegans homolog, DPY-11, is expressed only in the hypodermis and resides in the cytoplasm. It is required for body and sensory organ morphogeneis. Another uncharacterized TRX-related transmembrane protein, human TMX4, is included in the alignment. The active site sequence of TMX4 is CPSC. |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.7e-07 Score=109.89 Aligned_cols=138 Identities=14% Similarity=0.144 Sum_probs=89.1
Q ss_pred cccccccceEEEEEEe----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVT----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+. .+|+.||+|+.+......- .... -.+.
T Consensus 6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~---------------------------~~~~------~~~~ 52 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQK---------------------------AKTT------EHTR 52 (290)
T ss_pred eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhc---------------------------chHH------HHHH
Confidence 5689999999999986 3799999999754311000 0000 1123
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.|.+.+.++. +++. |+.++. +......|||||++|.++.+... ....++...+...+.+++ +..+|..|
T Consensus 53 ~e~~~l~~l~----~~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~al~~lH~~~ 125 (290)
T cd05613 53 TERQVLEHIR----QSPF--LVTLHYAFQTDTKLHLILDYINGGELFTHLS-QRERFKEQEVQIYSGEIVLALEHLHKLG 125 (290)
T ss_pred HHHHHHHhcc----cCCC--hhceeeEeecCCeEEEEEecCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4444444443 2232 222222 12234569999999999987643 223456666555544444 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|.|||++ .++++|||....
T Consensus 126 i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 126 IIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred eeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 99999999999975 589999997644
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.4e-07 Score=119.42 Aligned_cols=136 Identities=15% Similarity=0.141 Sum_probs=88.6
Q ss_pred cccccccceEEEEEEec-C-CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-E-GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~-G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
+.||.|++|.||+|... + ++.||+|.....-.. ....++.|
T Consensus 73 ~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~-------------------------------------~~~~~~~E 115 (478)
T PTZ00267 73 TLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDER-------------------------------------QAAYARSE 115 (478)
T ss_pred EEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHH-------------------------------------HHHHHHHH
Confidence 67999999999999854 4 688999965221100 00123456
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhh--Hh-hcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEG--LL-EKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~--l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
++.+.++. +...|.+-..+ ......+|||||++|.+|.+... +. ...++..++...+.++. +..+|..|+
T Consensus 116 ~~~l~~l~----Hpniv~~~~~~-~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i 190 (478)
T PTZ00267 116 LHCLAACD----HFGIVKHFDDF-KSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKM 190 (478)
T ss_pred HHHHHhCC----CCCEeEEEEEE-EECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 55555442 22222222222 22345789999999999987532 11 12355555555554544 788999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|+||.|||++ .++++|||....
T Consensus 191 vHrDlkp~NIll~~~~~~kL~DFgla~~ 218 (478)
T PTZ00267 191 MHRDLKSANIFLMPTGIIKLGDFGFSKQ 218 (478)
T ss_pred EECCcCHHhEEECCCCcEEEEeCcCcee
Confidence 9999999999965 599999997643
|
|
| >KOG4721|consensus | Back alignment and domain information |
|---|
Probab=98.61 E-value=9e-08 Score=114.66 Aligned_cols=138 Identities=15% Similarity=0.118 Sum_probs=93.8
Q ss_pred HHhCCChhhhccccCCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHH
Q psy12972 393 EDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINE 472 (1578)
Q Consensus 393 ~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e 472 (1578)
+.+-.|+++| .++ +=||||+-|-|++|+++ ++.||||-. ++.-+.|++-|
T Consensus 117 e~WeiPFe~I-sEL--eWlGSGaQGAVF~Grl~-netVAVKKV----~elkETdIKHL---------------------- 166 (904)
T KOG4721|consen 117 ELWEIPFEEI-SEL--EWLGSGAQGAVFLGRLH-NETVAVKKV----RELKETDIKHL---------------------- 166 (904)
T ss_pred hhccCCHHHh-hhh--hhhccCcccceeeeecc-CceehhHHH----hhhhhhhHHHH----------------------
Confidence 4445555554 222 56999999999999986 679999932 23333343333
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCce---EEEEeccCCCcCCchhhHhhcCCCHHHHHHHHH
Q psy12972 473 LKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTR---VLTTEFIDGVKISDKEGLLEKGFSLADVDRKLF 549 (1578)
Q Consensus 473 ~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~---VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~ 549 (1578)
+.+ ++...|.+-.| ||.- .|+|||+.-..|..+.. ..+.+.+..++....
T Consensus 167 ------------------RkL----kH~NII~FkGV----CtqsPcyCIiMEfCa~GqL~~VLk-a~~~itp~llv~Wsk 219 (904)
T KOG4721|consen 167 ------------------RKL----KHPNIITFKGV----CTQSPCYCIIMEFCAQGQLYEVLK-AGRPITPSLLVDWSK 219 (904)
T ss_pred ------------------Hhc----cCcceeeEeee----ecCCceeEEeeeccccccHHHHHh-ccCccCHHHHHHHHH
Confidence 222 22222333222 3332 59999999888888743 345677887777666
Q ss_pred HHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 550 TAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 550 ~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
.+. +..+|.|.++|||+|.-|||++ .|++.|||....+
T Consensus 220 ~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~ 262 (904)
T KOG4721|consen 220 GIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKEL 262 (904)
T ss_pred HhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhh
Confidence 655 7889999999999999999986 4899999976443
|
|
| >KOG0616|consensus | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.1e-07 Score=104.91 Aligned_cols=135 Identities=19% Similarity=0.169 Sum_probs=82.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
.-||.||+|.||..+.+ +|.-.|+||+..+- +++ +.+.---.+|-
T Consensus 50 ~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~-------------vVk---------------------lKQveH~~nEk 95 (355)
T KOG0616|consen 50 KTLGTGSFGRVHLVREKHSGNYYAMKVLDKQK-------------VVK---------------------LKQVEHTHNEK 95 (355)
T ss_pred eeeccCccceEEEEEEccCCceeehhhcCHHH-------------HHH---------------------HHHHHHHhhHH
Confidence 58999999999999976 78999999874221 000 00001112333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHH---HHHHHHHHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDR---KLFTAFAEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~---~l~~~~l~~i~~~G~v 562 (1578)
+-+.+.. +|. +-+.++.+ .+.-.|||||++|+.|-.+.. ....++.. .++ .-+-..++.||..+++
T Consensus 96 ~vL~~v~-----~PF--lv~l~~t~~d~~~lymvmeyv~GGElFS~Lr-k~~rF~e~-~arFYAAeivlAleylH~~~ii 166 (355)
T KOG0616|consen 96 RVLKAVS-----HPF--LVKLYGTFKDNSNLYMVMEYVPGGELFSYLR-KSGRFSEP-HARFYAAEIVLALEYLHSLDII 166 (355)
T ss_pred HHHhhcc-----Cce--eEEEEEeeccCCeEEEEEeccCCccHHHHHH-hcCCCCch-hHHHHHHHHHHHHHHHHhcCee
Confidence 3333322 111 11222111 234479999999999987643 11233322 222 1122348999999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+||+||.|||+. .++++|||-+-+
T Consensus 167 YRDLKPENiLlD~~G~iKitDFGFAK~ 193 (355)
T KOG0616|consen 167 YRDLKPENLLLDQNGHIKITDFGFAKR 193 (355)
T ss_pred eccCChHHeeeccCCcEEEEeccceEE
Confidence 999999999965 489999996533
|
|
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.2e-07 Score=108.57 Aligned_cols=138 Identities=19% Similarity=0.172 Sum_probs=87.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+.... .-++..|.
T Consensus 24 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~--------------------------------------~~~~~~e~ 65 (286)
T cd06638 24 ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI--------------------------------------DEEIEAEY 65 (286)
T ss_pred eeeccCCCcEEEEEEECCCCceeEEEeeccccch--------------------------------------HHHHHHHH
Confidence 57999999999999865 7899999987542110 00123444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC----CCCceEEEEeccCCCcCCchhhH--h-hcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD----KSSTRVLTTEFIDGVKISDKEGL--L-EKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~----~~t~~VLVME~i~G~~l~d~~~l--~-~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
..+.++. .+..-+.+...+.. -....+|||||++|.+|.++..- . ...++...+...+.++. +..+|.
T Consensus 66 ~~l~~l~---~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~ 142 (286)
T cd06638 66 NILKALS---DHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV 142 (286)
T ss_pred HHHHHHh---cCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh
Confidence 4444443 12222333332211 12335899999999999876321 1 12344444444443333 678899
Q ss_pred cCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 559 TGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
.|++|+|++|+||++. .++++|||....+
T Consensus 143 ~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 174 (286)
T cd06638 143 NKTIHRDVKGNNILLTTEGGVKLVDFGVSAQL 174 (286)
T ss_pred CCccccCCCHHhEEECCCCCEEEccCCceeec
Confidence 9999999999999965 4889999976443
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.1e-07 Score=107.32 Aligned_cols=138 Identities=17% Similarity=0.115 Sum_probs=90.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|... +|+.||||+.++.-.. + . ...-++.+|.
T Consensus 8 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----~------------------------~------~~~~~~~~ei 53 (267)
T cd08224 8 KKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMM----D------------------------A------KARQDCLKEI 53 (267)
T ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeeccccc----c------------------------h------hhHHHHHHHH
Confidence 57999999999999976 8999999987531100 0 0 0011234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH-h--hcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL-L--EKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l-~--~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+.++++. +...+.+...+. ......++|||++|.+|.++..- . ...++...+...+.+++ +..+|..|++
T Consensus 54 ~~l~~~~----~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~ 128 (267)
T cd08224 54 DLLKQLD----HPNVIKYLASFI-ENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIM 128 (267)
T ss_pred HHHHhCC----CCCeeeeeeeee-cCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 4444442 222222222222 22345799999999999876421 1 12345566666555555 6788999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.||+++ .++++|||...
T Consensus 129 h~dl~p~nil~~~~~~~~l~d~~~~~ 154 (267)
T cd08224 129 HRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred cCCcChhhEEECCCCcEEEeccceee
Confidence 999999999975 48899999753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.8e-07 Score=109.33 Aligned_cols=138 Identities=14% Similarity=0.103 Sum_probs=89.5
Q ss_pred cccccccceEEEEEEe-----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVT-----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|+||+|+. .+++.||||..++..... ..-+|
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~------------------------------------~~~~~ 54 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQ------------------------------------QWGEF 54 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHH------------------------------------HHHHH
Confidence 5689999999999984 256899999875321110 01134
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh----------------cCCCHHHHHHH
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE----------------KGFSLADVDRK 547 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~----------------~~~~~~~v~~~ 547 (1578)
.+|++.+++++ +..-+.+...+. .....+|||||++|.+|.++..... ..++...+...
T Consensus 55 ~~E~~~l~~l~----h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 129 (283)
T cd05090 55 QQEASLMAELH----HPNIVCLLGVVT-QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHI 129 (283)
T ss_pred HHHHHHHhhCC----CCCeeeEEEEEe-cCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHH
Confidence 55666555553 222233333222 2345689999999999987643211 12344444444
Q ss_pred HHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 548 LFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 548 l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+.++. +..+|..|++|+|++|.|||+. .+++.|||....+
T Consensus 130 ~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 174 (283)
T cd05090 130 AIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREI 174 (283)
T ss_pred HHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccc
Confidence 44444 7889999999999999999965 4899999976543
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >KOG1095|consensus | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.8e-07 Score=122.44 Aligned_cols=139 Identities=18% Similarity=0.175 Sum_probs=107.7
Q ss_pred cccccccceEEEEEEec--CCC----EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK--EGV----EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--~G~----~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
++||.|.||.||+|... +|. .||||..++... ..++.|
T Consensus 698 ~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~------------------------------------~~~~~~ 741 (1025)
T KOG1095|consen 698 RVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS------------------------------------EQEVSD 741 (1025)
T ss_pred eeeccccccceEEEEEecCCCCccceEEEEEeccccCC------------------------------------HHHHHH
Confidence 68999999999999976 454 488887765432 245678
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh------hcCCCHHHHHHHHHHHH--HH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL------EKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~------~~~~~~~~v~~~l~~~~--l~ 554 (1578)
|.+||.+|..|. |..-|..=.|-.+ .+...|++||++|..|..+..-. ...++..++....+++. .+
T Consensus 742 Fl~Ea~~m~~f~----HpNiv~liGv~l~-~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~ 816 (1025)
T KOG1095|consen 742 FLKEALLMSKFD----HPNIVSLIGVCLD-SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMN 816 (1025)
T ss_pred HHHHHHHHhcCC----CcceeeEEEeecC-CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhH
Confidence 999999998875 3333444444434 66788999999999998875533 45677888888888877 78
Q ss_pred HHHHcCccccCCCCCCCCCC---eeEEecCCchhhhh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRLV 588 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l~ 588 (1578)
.+...+|||||+-.-|.|+. .+++-|||++..|.
T Consensus 817 YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy 853 (1025)
T KOG1095|consen 817 YLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIY 853 (1025)
T ss_pred HHHhCCCcCcchhhhheeecccCcEEEcccchhHhhh
Confidence 89999999999999999965 48999999986443
|
|
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.8e-07 Score=107.07 Aligned_cols=141 Identities=14% Similarity=0.061 Sum_probs=88.9
Q ss_pred CcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 408 ENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
.+.||.|++|+||+|+.. +|+.|++|+....-..... .+..+ .+.+|
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~--------------------------~~~~~------~~~~e 52 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTG--------------------------QEAVK------QLEQE 52 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccc--------------------------hHHHH------HHHHH
Confidence 367999999999999976 8999999987643211100 00011 12334
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
.+-+.++ .+...+.+..... .....+++|||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+
T Consensus 53 ~~~l~~~----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 126 (258)
T cd06632 53 IALLSKL----QHPNIVQYLGTER-EEDNLYIFLELVPGGSLAKLLK-KYGSFPEPVIRLYTRQILLGLEYLHDRNTVHR 126 (258)
T ss_pred HHHHHhc----CCCCchheeeeEe-cCCeEEEEEEecCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 4333333 2222223332221 2245689999999999987643 122355555544444443 678899999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|+||++. .++++|||....
T Consensus 127 dl~~~ni~~~~~~~~kl~d~~~~~~ 151 (258)
T cd06632 127 DIKGANILVDTNGVVKLADFGMAKQ 151 (258)
T ss_pred CCCHHHEEECCCCCEEEccCcccee
Confidence 9999999964 589999996543
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=98.60 E-value=2e-07 Score=109.43 Aligned_cols=138 Identities=17% Similarity=0.063 Sum_probs=90.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|..+ +|+.||||...+...... + .+-.+.+|.
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~----------------------------~------~~~~~~~E~ 51 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR----------------------------K------GESMALNEK 51 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccch----------------------------H------HHHHHHHHH
Confidence 56899999999999865 799999998754321100 0 000123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH-hhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL-LEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l-~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +...+.+...+. ......+||||++|.+|.+.... ...+++...+...+.+++ +..+|..|++|+
T Consensus 52 ~il~~l~----~~~i~~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~ 126 (285)
T cd05630 52 QILEKVN----SRFVVSLAYAYE-TKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYR 126 (285)
T ss_pred HHHHhCC----CCCeeeeeEEEe-cCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeC
Confidence 5554442 222222322222 22446799999999999876432 223466666666555555 678999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.||++. .++++|||...
T Consensus 127 dikp~Nil~~~~~~~~l~Dfg~~~ 150 (285)
T cd05630 127 DLKPENILLDDHGHIRISDLGLAV 150 (285)
T ss_pred CCCHHHEEECCCCCEEEeecccee
Confidence 9999999965 58999999753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.4e-07 Score=103.42 Aligned_cols=137 Identities=23% Similarity=0.215 Sum_probs=92.2
Q ss_pred cccccccceEEEEEEecC-CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKE-GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~-G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++|++|++|+||+|...+ |+.||||+.+..... ...-++.+|+
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~------------------------------------~~~~~~~~e~ 48 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE------------------------------------KQREEFLREI 48 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccch------------------------------------HHHHHHHHHH
Confidence 689999999999999875 899999998754321 0112345566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.+++ +...+.+...+ .......++|||++|.+|.++.......++...+...+.+++ +..+|..|++|+|
T Consensus 49 ~~~~~~~----~~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~d 123 (225)
T smart00221 49 RILKKLK----HPNIVKLYGVF-EDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRD 123 (225)
T ss_pred HHHHhCC----CCChhhheeee-ecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 6665552 21112222221 223567899999999988876432211156555555555444 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||++. .++++|||....
T Consensus 124 i~~~ni~v~~~~~~~l~d~g~~~~ 147 (225)
T smart00221 124 LKPENILLGMDGLVKLADFGLARF 147 (225)
T ss_pred CCHHHEEEcCCCCEEEeeCceeeE
Confidence 999999965 588999996543
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.6e-07 Score=119.15 Aligned_cols=139 Identities=14% Similarity=0.105 Sum_probs=86.2
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+....-... .+. ..+.+|.
T Consensus 38 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~--~~~---------------------------------~~~~~Ei 82 (496)
T PTZ00283 38 RVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSE--ADK---------------------------------NRAQAEV 82 (496)
T ss_pred EEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCH--HHH---------------------------------HHHHHHH
Confidence 6799999999999985 489999999875431100 000 0112333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC-------CCCceEEEEeccCCCcCCchhhHh---hcCCCHHHHHHHHHHHH--HHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD-------KSSTRVLTTEFIDGVKISDKEGLL---EKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~-------~~t~~VLVME~i~G~~l~d~~~l~---~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
..+..+ .+...+..-..+.. ....-.|||||++|.+|.+...-. ...++...+...+.+++ +..
T Consensus 83 ~~l~~~----~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~ 158 (496)
T PTZ00283 83 CCLLNC----DFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHH 158 (496)
T ss_pred HHHhcC----CCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHH
Confidence 322221 11111111111100 001135999999999998764311 12355566666666655 788
Q ss_pred HHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 556 IFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|..|++|+|++|.|||+. .++++|||....
T Consensus 159 lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~ 192 (496)
T PTZ00283 159 VHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKM 192 (496)
T ss_pred HHhCCEecCCCCHHHEEEeCCCCEEEEecccCee
Confidence 9999999999999999975 599999997643
|
|
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.5e-07 Score=109.95 Aligned_cols=137 Identities=17% Similarity=0.126 Sum_probs=87.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.+|.|++|+||+|+.. +|+.||+|+....-.. .-++..|.
T Consensus 22 ~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~--------------------------------------~~~~~~e~ 63 (282)
T cd06636 22 EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDE--------------------------------------EEEIKLEI 63 (282)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecChHH--------------------------------------HHHHHHHH
Confidence 57999999999999974 7899999987422100 01123444
Q ss_pred HHHHHHHHhhCCCCCe-eecEEee-----CCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 488 RNAERCSKDLAHLPYV-YIPRILW-----DKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v-~vP~v~~-----~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
+.+.++. +++.+ .+...+. ......+++|||+.|.++.++..... ..++...+...+.++. +..+|.
T Consensus 64 ~~l~~~~----~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~ 139 (282)
T cd06636 64 NMLKKYS----HHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHA 139 (282)
T ss_pred HHHHHhc----CCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4444442 22222 2211111 11234579999999999988754322 2345444444444433 678899
Q ss_pred cCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 559 TGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
.|++|+|++|.||+++ .++++|||....+
T Consensus 140 ~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~ 171 (282)
T cd06636 140 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 171 (282)
T ss_pred CCcccCCCCHHHEEECCCCCEEEeeCcchhhh
Confidence 9999999999999976 5899999976543
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.8e-07 Score=112.90 Aligned_cols=49 Identities=18% Similarity=0.156 Sum_probs=37.6
Q ss_pred CCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 539 FSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 539 ~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
++...+...+.++. +..+|..|++|+|++|.|||+. .++++|||....+
T Consensus 170 l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~ 223 (337)
T cd05054 170 LTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDI 223 (337)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhc
Confidence 44455555555555 7889999999999999999965 4899999987543
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.7e-07 Score=106.57 Aligned_cols=145 Identities=14% Similarity=0.069 Sum_probs=92.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
..||.|++|+||+|... +|+.||||+........-. ..--.++. -++..|+
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~----------------------~~~~~~~~------~~~~~e~ 57 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASS----------------------KDRKRSML------DALAREI 57 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccch----------------------hHHHHHHH------HHHHHHH
Confidence 57899999999999864 7899999987543211000 00001111 1345555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++. +...+.+..... ......++|||++|.+|.++... ...++...+...+.+++ +..+|..|++|+|
T Consensus 58 ~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~d 131 (267)
T cd06628 58 ALLKELQ----HENIVQYLGSSL-DADHLNIFLEYVPGGSVAALLNN-YGAFEETLVRNFVRQILKGLNYLHNRGIIHRD 131 (267)
T ss_pred HHHHhcC----CCCeeeEEEEEE-eCCccEEEEEecCCCCHHHHHHh-ccCccHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 5555553 322233333322 23456899999999998876431 23345444444444444 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|.||++. .+++.|||....+
T Consensus 132 i~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 132 IKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred CCHHHEEEcCCCCEEecccCCCccc
Confidence 999999965 4899999976443
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=98.59 E-value=3.2e-07 Score=107.18 Aligned_cols=136 Identities=19% Similarity=0.229 Sum_probs=92.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|... +|..|++|+........ .-+|.+|+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------------------------------------~~~~~~e~ 53 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEE-------------------------------------LEDYMVEI 53 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHH-------------------------------------HHHHHHHH
Confidence 56999999999999976 68889999874332110 01234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+..+ .+..-+.+...+. .....++||||++|..+.+...-....++...+...+.+++ +..+|..|++|+|
T Consensus 54 ~~l~~l----~h~~ii~~~~~~~-~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~d 128 (282)
T cd06643 54 DILASC----DHPNIVKLLDAFY-YENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRD 128 (282)
T ss_pred HHHHHC----CCCCeeeEEEEEe-eCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence 444443 2222233333332 23456899999999998775332234566666666665555 6889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||...+
T Consensus 129 lkp~nili~~~~~~kl~dfg~~~~ 152 (282)
T cd06643 129 LKAGNILFTLDGDIKLADFGVSAK 152 (282)
T ss_pred CCcccEEEccCCCEEEcccccccc
Confidence 999999965 599999997644
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.8e-07 Score=108.19 Aligned_cols=136 Identities=17% Similarity=0.168 Sum_probs=87.1
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|..+ .+..||||+...... ...+.+
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------------------------------------~~~~~~ 55 (288)
T cd05061 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS------------------------------------LRERIE 55 (288)
T ss_pred eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC------------------------------------HHHHHH
Confidence 67999999999999754 356899997642211 011223
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------cCCCHHHHHHHHHHHH-
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------KGFSLADVDRKLFTAF- 552 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------~~~~~~~v~~~l~~~~- 552 (1578)
+.+|...+.++. +..-+.+...+ ......+|||||++|.+|.+...-.. ...+...+...+.+++
T Consensus 56 ~~~e~~~l~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 130 (288)
T cd05061 56 FLNEASVMKGFT----CHHVVRLLGVV-SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 130 (288)
T ss_pred HHHHHHHHHhCC----CCCeeeEEEEE-cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHH
Confidence 455655555543 22222222232 22356799999999999998753211 1112334444444443
Q ss_pred -HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 553 -AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 553 -l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.||++. .++++|||...
T Consensus 131 ~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~ 167 (288)
T cd05061 131 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 167 (288)
T ss_pred HHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCccc
Confidence 6788999999999999999965 48899999754
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.5e-07 Score=107.12 Aligned_cols=139 Identities=15% Similarity=0.149 Sum_probs=89.6
Q ss_pred cccccccceEEEEEEecC-CC--EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 409 NPIAAASLAQVFRAVTKE-GV--EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~-G~--~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
+.||.|++|.||+|+..+ ++ .||||......... . .--+|..
T Consensus 5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~--~---------------------------------~~~~~~~ 49 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTR--S---------------------------------EMEDFLS 49 (272)
T ss_pred cccCcccCceEEEeEEccCCCeeeEEEEecccCcCCH--H---------------------------------HHHHHHH
Confidence 468999999999999764 43 69999875432110 0 0013456
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeC-----CCCceEEEEeccCCCcCCchhhHhh-----cCCCHHHHHHHHHHHH--H
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWD-----KSSTRVLTTEFIDGVKISDKEGLLE-----KGFSLADVDRKLFTAF--A 553 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~-----~~t~~VLVME~i~G~~l~d~~~l~~-----~~~~~~~v~~~l~~~~--l 553 (1578)
|++.+.++. +...+.+...... .....+++|||++|.++.+...... ..++...+...+.++. +
T Consensus 50 E~~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 125 (272)
T cd05075 50 EAVCMKEFD----HPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGM 125 (272)
T ss_pred HHHHHHhCC----CCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHH
Confidence 666665553 2222333322211 1234689999999999877542211 2245555555555544 7
Q ss_pred HHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 554 EQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 554 ~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
..+|..|++|+|++|.|||++ .++++|||....
T Consensus 126 ~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 161 (272)
T cd05075 126 EYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKK 161 (272)
T ss_pred HHHHHCCeeccccchhheEEcCCCCEEECCCCcccc
Confidence 889999999999999999975 489999997643
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.3e-07 Score=118.52 Aligned_cols=128 Identities=18% Similarity=0.156 Sum_probs=86.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
..||.|++|.||+|+.. +|+.||||..... .+.+|+
T Consensus 175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~-------------------------------------------~~~~E~ 211 (461)
T PHA03211 175 RALTPGSEGCVFESSHPDYPQRVVVKAGWYA-------------------------------------------SSVHEA 211 (461)
T ss_pred EEEccCCCeEEEEEEECCCCCEEEEeccccc-------------------------------------------CHHHHH
Confidence 67999999999999975 6899999942100 113466
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...|.+-.... .....+||||++.| .+.+........++...+...+.++. +..+|..|++|+|
T Consensus 212 ~iL~~L~----HpnIv~l~~~~~-~~~~~~lv~e~~~~-~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrD 285 (461)
T PHA03211 212 RLLRRLS----HPAVLALLDVRV-VGGLTCLVLPKYRS-DLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRD 285 (461)
T ss_pred HHHHHCC----CCCCCcEEEEEE-ECCEEEEEEEccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECc
Confidence 5555543 322233333222 23456899999976 44443221223467777776666665 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 286 LKP~NILl~~~~~vkL~DFGla~ 308 (461)
T PHA03211 286 IKTENVLVNGPEDICLGDFGAAC 308 (461)
T ss_pred CCHHHEEECCCCCEEEcccCCce
Confidence 999999975 48999999763
|
|
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.1e-07 Score=108.77 Aligned_cols=132 Identities=15% Similarity=0.163 Sum_probs=86.4
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|.||+|+. .+|+.||||+...+.... .+-.+.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~~~~E~ 50 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVE------------------------------------LQKQIMSEL 50 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChH------------------------------------HHHHHHHHH
Confidence 5799999999999985 489999999875432110 011244555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+...+. ......|||||++|..+.... .++...+...+.+++ +..+|..|++|+|
T Consensus 51 ~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d 120 (279)
T cd06619 51 EILYKCD----SPYIIGFYGAFF-VENRISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSLKILHRD 120 (279)
T ss_pred HHHHhCC----CCCeeeEEEEEE-ECCEEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCCEeeCC
Confidence 5554442 222222222222 224467999999999886432 233444444444443 6789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||++ .++++|||....
T Consensus 121 lkp~Nill~~~~~~~l~dfg~~~~ 144 (279)
T cd06619 121 VKPSNMLVNTRGQVKLCDFGVSTQ 144 (279)
T ss_pred CCHHHEEECCCCCEEEeeCCccee
Confidence 999999965 599999997644
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >KOG0201|consensus | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.9e-08 Score=118.60 Aligned_cols=146 Identities=18% Similarity=0.212 Sum_probs=92.0
Q ss_pred ChhhhccccCCcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHH
Q psy12972 398 THSQLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVP 476 (1578)
Q Consensus 398 ~~~~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 476 (1578)
++...|..+ +-||.||+|.||||.. ++++.||+||..=+..+.-- ++
T Consensus 10 ~~~~~~~~~--~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deI--------------------------ed---- 57 (467)
T KOG0201|consen 10 DPELLYTKL--ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEI--------------------------ED---- 57 (467)
T ss_pred Ccccccccc--hhccccccceeeeeeeccccceEEEEEechhhcchhh--------------------------HH----
Confidence 456667777 6699999999999995 58999999998532221100 11
Q ss_pred HHHHHhHHHHH--HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCC-CHHHHHHHHHHHH-
Q psy12972 477 LEQELDFLNEG--RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGF-SLADVDRKLFTAF- 552 (1578)
Q Consensus 477 l~~ElDf~~Ea--~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~-~~~~v~~~l~~~~- 552 (1578)
+.+|+-+..+- .|..+.. .-. + ..+.-.++|||+.|.++.++. +..++ +...++-.+.++.
T Consensus 58 iqqei~~Ls~~~~~~it~yy----------gsy-l--~g~~LwiiMey~~gGsv~~lL--~~~~~~~E~~i~~ilre~l~ 122 (467)
T KOG0201|consen 58 IQQEISVLSQCDSPNITEYY----------GSY-L--KGTKLWIIMEYCGGGSVLDLL--KSGNILDEFEIAVILREVLK 122 (467)
T ss_pred HHHHHHHHHhcCcchHHhhh----------hhe-e--ecccHHHHHHHhcCcchhhhh--ccCCCCccceeeeehHHHHH
Confidence 11222221111 1111111 000 1 123456899999999999874 33444 5555555444444
Q ss_pred -HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhhhhh
Q psy12972 553 -AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRLVLA 590 (1578)
Q Consensus 553 -l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l~l~ 590 (1578)
+..+|.++.+|+|+++.||++. .+++.|||-..++...
T Consensus 123 ~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~ 164 (467)
T KOG0201|consen 123 GLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNT 164 (467)
T ss_pred HhhhhhhcceecccccccceeEeccCcEEEEecceeeeeech
Confidence 8899999999999999999954 5788888876665443
|
|
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.5e-07 Score=106.27 Aligned_cols=131 Identities=17% Similarity=0.115 Sum_probs=88.2
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|+||+|. .+|+.||||+.+..... -.|.+|..
T Consensus 12 ~~lg~g~~g~v~~~~-~~~~~~~iK~~~~~~~~---------------------------------------~~~~~e~~ 51 (254)
T cd05083 12 EIIGEGEFGAVLQGE-YTGQKVAVKNIKCDVTA---------------------------------------QAFLEETA 51 (254)
T ss_pred eeeccCCCCceEecc-cCCCceEEEeecCcchH---------------------------------------HHHHHHHH
Confidence 678999999999996 47889999986432110 02344544
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++ .+...+.+..... ....+++|||++|.++.+...... ..++...+...+.+++ +..+|..|++|+|
T Consensus 52 ~l~~~----~~~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~d 125 (254)
T cd05083 52 VMTKL----HHKNLVRLLGVIL--HNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRD 125 (254)
T ss_pred HHHhC----CCCCcCeEEEEEc--CCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence 44443 2333344444442 234689999999999988743222 2355555544444443 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+||+++ .++++|||...
T Consensus 126 l~p~nili~~~~~~kl~Dfg~~~ 148 (254)
T cd05083 126 LAARNILVSEDGVAKVSDFGLAR 148 (254)
T ss_pred cCcceEEEcCCCcEEECCCccce
Confidence 999999965 58999999754
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.4e-07 Score=115.28 Aligned_cols=136 Identities=18% Similarity=0.180 Sum_probs=84.9
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+. .+|+.||||+....... ... .-.+.+|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~------------------------------~~~~~~E~ 50 (372)
T cd07853 6 RPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQN-----LVS------------------------------CKRVFREL 50 (372)
T ss_pred ceeeeCCCEEEEEEEECCCCCEEEEEeccccccc-----hHH------------------------------HHHHHHHH
Confidence 5799999999999996 48999999976421110 000 01123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC----CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK----SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~----~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+.+..++ +...+.+-.++..- ....++||||+.| .+.+.. .....++...+...+.+++ +..+|..|+
T Consensus 51 ~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~-~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i 124 (372)
T cd07853 51 KMLCFFK----HDNVLSALDILQPPHIDPFEEIYVVTELMQS-DLHKII-VSPQPLSSDHVKVFLYQILRGLKYLHSAGI 124 (372)
T ss_pred HHHHhCC----CCCcCCHhheecCCCccccceEEEEeecccc-CHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 5554443 22222222222111 1245799999975 443332 1233466666655555554 788999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|+|++|.|||+. .++++|||...
T Consensus 125 vH~dlkp~Nili~~~~~~kL~Dfg~a~ 151 (372)
T cd07853 125 LHRDIKPGNLLVNSNCVLKICDFGLAR 151 (372)
T ss_pred eCCCCChHHEEECCCCCEEecccccee
Confidence 9999999999975 58999999764
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.4e-07 Score=108.03 Aligned_cols=136 Identities=14% Similarity=0.138 Sum_probs=88.6
Q ss_pred cccccccceEEEEEEecC------CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTKE------GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~------G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|.... ++.||||+.+....... .-+
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~------------------------------------~~~ 54 (283)
T cd05048 11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKV------------------------------------QQE 54 (283)
T ss_pred hcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHH------------------------------------HHH
Confidence 568999999999998642 26899998764321100 012
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------cCCCHHHHHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------------KGFSLADVDRK 547 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------------~~~~~~~v~~~ 547 (1578)
|.+|.+.+.++. +...+.+-..+ .......++|||++|.+|.+...... ..++...+...
T Consensus 55 ~~~ei~~l~~l~----h~~i~~~~~~~-~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 129 (283)
T cd05048 55 FRQEAELMSDLQ----HPNIVCLLGVC-TKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHI 129 (283)
T ss_pred HHHHHHHHHhcC----CcccceEEEEE-cCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHH
Confidence 455666555543 22222222222 22345679999999999887643211 23455555555
Q ss_pred HHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 548 LFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 548 l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+.++. +..+|..|++|+|++|.||+++ .++++|||...
T Consensus 130 ~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~ 172 (283)
T cd05048 130 AIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSR 172 (283)
T ss_pred HHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCccee
Confidence 55544 6889999999999999999975 48899999764
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >KOG0597|consensus | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.7e-07 Score=112.59 Aligned_cols=226 Identities=17% Similarity=0.201 Sum_probs=122.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-||-||+|.||||+.+ +++-||+|+.-.- .+-+.|+..++...++.+.+- .
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~--gr~~k~l~~l~~ev~i~r~lk----H--------------------- 60 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKS--GRNEKELKNLRQEVRILRSLK----H--------------------- 60 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhc--CCchHHHHHHHHHHHHHHhcC----C---------------------
Confidence 45899999999999976 7899999987321 122344444444444333220 0
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.|.-.|.+-| |-+++-++|.||+.| .|..+.. .+..++.+.+-+...+.. +..+|.+++.|||
T Consensus 61 pniv~m~esf-------------Et~~~~~vVte~a~g-~L~~il~-~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd 125 (808)
T KOG0597|consen 61 PNIVEMLESF-------------ETSAHLWVVTEYAVG-DLFTILE-QDGKLPEEQVRAIAYDLVSALYYLHSNRILHRD 125 (808)
T ss_pred cchhhHHHhh-------------cccceEEEEehhhhh-hHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 0111222211 123445799999999 6666532 223344333333333333 8899999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhhhhhh----hcc-cCCCCCCCCCCccccCcccchhh-hHHHHHHhhhhhhhhcccc
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRLVLAT----TLR-EDGYPDSGEWNPLEESPRMNFNL-IMLWYTFLLNVLFINCAVS 636 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l~l~~----~~~-~~g~~D~G~~~~l~~~~r~~~~l-~~lw~~~~l~~~~~~~~~~ 636 (1578)
++|.|||+. .+++.|||.+..+..-+ +.. ..-|+-.-++... .+.. ..||- +++++......
T Consensus 126 ~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~------pyd~~sDlWs---lGcilYE~~~G 196 (808)
T KOG0597|consen 126 MKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQ------PYDHTSDLWS---LGCILYELYVG 196 (808)
T ss_pred CCcceeeecCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCC------CccchhhHHH---HHHHHHHHhcC
Confidence 999999965 58999999765433211 111 1113333333321 1111 24672 23333223333
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhcc
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYD 699 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD 699 (1578)
+-||- -....+|++..|-|-.+ .+.+..-|..+-+.. +.+||.+|..+-
T Consensus 197 ~PPF~-------------a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~gL-L~kdP~~RltW~ 246 (808)
T KOG0597|consen 197 QPPFY-------------ARSITQLVKSILKDPVKPPSTASSSFVNFLQGL-LIKDPAQRLTWT 246 (808)
T ss_pred CCCch-------------HHHHHHHHHHHhcCCCCCcccccHHHHHHHHHH-hhcChhhcccHH
Confidence 33331 22334555555555433 235666676665543 457888887654
|
|
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.7e-07 Score=108.35 Aligned_cols=137 Identities=21% Similarity=0.172 Sum_probs=91.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|+.|+||+|..+ +|+.|++|+..+.... +-++..|.
T Consensus 12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--------------------------------------~~~~~~e~ 53 (275)
T cd06608 12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDE--------------------------------------EEEIKEEY 53 (275)
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEEecCchh--------------------------------------HHHHHHHH
Confidence 78999999999999975 7899999998643210 11234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC-----CCceEEEEeccCCCcCCchhhHh---hcCCCHHHHHHHHHHHH--HHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK-----SSTRVLTTEFIDGVKISDKEGLL---EKGFSLADVDRKLFTAF--AEQIF 557 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~-----~t~~VLVME~i~G~~l~d~~~l~---~~~~~~~~v~~~l~~~~--l~~i~ 557 (1578)
..+.++.. +...+.+...+.+. .....|||||++|.+|.++.... ...++...+...+.+++ +..+|
T Consensus 54 ~~l~~~~~---h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH 130 (275)
T cd06608 54 NILRKYSN---HPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH 130 (275)
T ss_pred HHHHHhcC---CCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 55555421 22222332222211 12247999999999998875422 23456655555554444 67889
Q ss_pred HcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 558 QTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 558 ~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
..|++|+|++|.||+++ .++++|||....
T Consensus 131 ~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~ 162 (275)
T cd06608 131 ENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQ 162 (275)
T ss_pred cCCcccCCCCHHHEEEccCCeEEECCCcccee
Confidence 99999999999999975 489999997543
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.7e-07 Score=109.31 Aligned_cols=137 Identities=21% Similarity=0.196 Sum_probs=92.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+........ . .+-++..|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-----------------------------~------~~~~~~~e~ 50 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG-----------------------------G------IPNQALREI 50 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccc-----------------------------h------hhHHHHHHH
Confidence 56899999999999964 79999999875432100 0 011344555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..++++. +..-+.+...+. .....++||||+ |.+|.+........++...+...+.+++ +..+|..|++|+|
T Consensus 51 ~~l~~~~----~~~i~~~~~~~~-~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 124 (286)
T cd07832 51 KALQACQ----HPYVVKLLDVFP-HGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRD 124 (286)
T ss_pred HHHHhCC----CCCCcceeeEEe-cCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 5555543 222233333332 234568999999 9999876443334566666665555554 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||++. .++++|||....
T Consensus 125 l~p~ni~~~~~~~~~l~dfg~~~~ 148 (286)
T cd07832 125 LKPANLLISADGVLKIADFGLARL 148 (286)
T ss_pred cCHHHEEEcCCCcEEEeeeeeccc
Confidence 999999965 488999997543
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.2e-07 Score=112.41 Aligned_cols=138 Identities=20% Similarity=0.185 Sum_probs=91.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||+|+.+...... . ....+.+|+
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~--------------------~---------------~~~~~~~E~ 57 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD--------------------G---------------IPISSLREI 57 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC--------------------C---------------CcchhhHHH
Confidence 46899999999999975 79999999875432110 0 001223455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++ .+...+.+..++.+-. ...+|||||++| .+.++.......++...+...+.+++ +..+|..|++|+
T Consensus 58 ~~l~~l----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~ 132 (309)
T cd07845 58 TLLLNL----RHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHR 132 (309)
T ss_pred HHHHhC----CCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 555444 3333445555553322 346899999976 55554332224456666665555555 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|+||++. .++++|||....
T Consensus 133 dl~p~nil~~~~~~~kL~dfg~~~~ 157 (309)
T cd07845 133 DLKVSNLLLTDKGCLKIADFGLART 157 (309)
T ss_pred CCCHHHEEECCCCCEEECccceeee
Confidence 9999999965 589999997643
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.1e-07 Score=110.01 Aligned_cols=134 Identities=16% Similarity=0.137 Sum_probs=89.9
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|+.|.||+|+. .+|+.||||+........ .-.+.+|+
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~-------------------------------------~~~~~~e~ 68 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-------------------------------------KELIINEI 68 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcch-------------------------------------HHHHHHHH
Confidence 5699999999999985 479999999764321110 01134455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+..-+.+...+. .....+|||||++|.++.++. .....+..++...+.++. +..+|..|++|+|
T Consensus 69 ~~l~~~----~h~~v~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~d 141 (296)
T cd06654 69 LVMREN----KNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSNQVIHRD 141 (296)
T ss_pred HHHHhC----CCCCEeeEEEEEE-eCCEEEEeecccCCCCHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 444433 2222222222222 234678999999999998863 334456666666555544 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||++ .++++|||....
T Consensus 142 Lkp~Nill~~~~~~kl~dfg~~~~ 165 (296)
T cd06654 142 IKSDNILLGMDGSVKLTDFGFCAQ 165 (296)
T ss_pred CCHHHEEEcCCCCEEECccccchh
Confidence 999999975 489999997543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.4e-07 Score=109.65 Aligned_cols=139 Identities=19% Similarity=0.181 Sum_probs=88.8
Q ss_pred cccccccceEEEEEEe--------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT--------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQE 480 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l--------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 480 (1578)
++||.|++|.||+|+. .++..||+|+........ + .
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~---~---------------------------------~ 64 (304)
T cd05101 21 KPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEK---D---------------------------------L 64 (304)
T ss_pred ceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchH---H---------------------------------H
Confidence 7899999999999974 245689999886432211 0 0
Q ss_pred HhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------cCCCHHHHH
Q psy12972 481 LDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------------KGFSLADVD 545 (1578)
Q Consensus 481 lDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------------~~~~~~~v~ 545 (1578)
-++..|...+.++. .+..-+.+...+. ......|+|||++|.+|.++..... ..++...+.
T Consensus 65 ~~~~~E~~~l~~l~---~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (304)
T cd05101 65 SDLVSEMEMMKMIG---KHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLV 140 (304)
T ss_pred HHHHHHHHHHHhhc---cCCCchheeEEEe-cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHH
Confidence 12344554454442 1222233333332 2244579999999999887643211 123444454
Q ss_pred HHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 546 RKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 546 ~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
..+.+++ +..+|..|++|+|++|.||+++ .++++|||....+
T Consensus 141 ~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~ 187 (304)
T cd05101 141 SCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDV 187 (304)
T ss_pred HHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceec
Confidence 4444444 6889999999999999999975 4899999976543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.4e-07 Score=107.15 Aligned_cols=136 Identities=18% Similarity=0.182 Sum_probs=90.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+....... ..+.+|.
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-------------------------------------~~~~~e~ 57 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDF-------------------------------------AVVQQEI 57 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHH-------------------------------------HHHHHHH
Confidence 56899999999999864 799999999865422110 0122333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+..+ .+..-+.+...+. .....+++|||++|..|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 58 ~~~~~l----~h~~ii~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 131 (267)
T cd06645 58 IMMKDC----KHSNIVAYFGSYL-RRDKLWICMEFCGGGSLQDIYH-VTGPLSESQIAYVSRETLQGLYYLHSKGKMHRD 131 (267)
T ss_pred HHHHhC----CCCCeeeEEEEEE-eCCEEEEEEeccCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 333332 2222233333322 1234579999999999988643 233466666666655555 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|.||++. .++++|||....+
T Consensus 132 lkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd06645 132 IKGANILLTDNGHVKLADFGVSAQI 156 (267)
T ss_pred CCHHHEEECCCCCEEECcceeeeEc
Confidence 999999965 4899999976433
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.7e-07 Score=106.05 Aligned_cols=137 Identities=17% Similarity=0.140 Sum_probs=95.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|+.|.||+|+.. +|+.||||+..+..... ..-++..|.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~------------------------------------~~~~~~~e~ 50 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEE------------------------------------FRKQLLREL 50 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchH------------------------------------HHHHHHHHH
Confidence 68999999999999976 69999999886543210 011245556
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~vH~ 564 (1578)
+.+.+++ +..-+.+...+. ......|||||++|.+|.+.... ...++...+...+.+++ +..+|. .|++|+
T Consensus 51 ~~l~~l~----~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~ 124 (264)
T cd06623 51 KTLRSCE----SPYVVKCYGAFY-KEGEISIVLEYMDGGSLADLLKK-VGKIPEPVLAYIARQILKGLDYLHTKRHIIHR 124 (264)
T ss_pred HHHHhcC----CCCeeeEEEEEc-cCCeEEEEEEecCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHhccCCCccC
Confidence 6665554 222233333322 23556899999999999887432 24567666666665555 678999 999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|++|.||++. .++++|||....+
T Consensus 125 ~l~~~ni~~~~~~~~~l~df~~~~~~ 150 (264)
T cd06623 125 DIKPSNLLINSKGEVKIADFGISKVL 150 (264)
T ss_pred CCCHHHEEECCCCCEEEccCccceec
Confidence 9999999975 5899999976433
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=98.57 E-value=3.1e-07 Score=107.03 Aligned_cols=136 Identities=17% Similarity=0.160 Sum_probs=86.8
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|+||+|+.. +++.||||+........ ...+
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~------------------------------------~~~~ 55 (277)
T cd05062 12 RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMR------------------------------------ERIE 55 (277)
T ss_pred eeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHH------------------------------------HHHH
Confidence 56899999999999753 36789999864321100 0112
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------cCCCHHHHHHHHHHHH-
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------KGFSLADVDRKLFTAF- 552 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------~~~~~~~v~~~l~~~~- 552 (1578)
|.+|+.-+.++ .+...+.+-..+ ...+..++||||++|.+|.++..-.. ...+...+...+.+++
T Consensus 56 ~~~e~~~l~~l----~~~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 130 (277)
T cd05062 56 FLNEASVMKEF----NCHHVVRLLGVV-SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIAD 130 (277)
T ss_pred HHHHHHHHHhC----CCCCeeeEEEEE-cCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHH
Confidence 44555444433 222223333332 23356789999999999987643111 1123344444444444
Q ss_pred -HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 553 -AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 553 -l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.||++. .++++|||...
T Consensus 131 ~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~ 167 (277)
T cd05062 131 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 167 (277)
T ss_pred HHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCcc
Confidence 6789999999999999999976 48899999754
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.9e-07 Score=106.63 Aligned_cols=136 Identities=13% Similarity=-0.018 Sum_probs=89.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
..||.|++|.||+|+.. +|+.||||......... .-++.+|+
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~-------------------------------------~~~~~~e~ 56 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRY-------------------------------------VQPLHEEI 56 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHH-------------------------------------HHHHHHHH
Confidence 57999999999999955 78899999765432110 11245566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCC--CHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGF--SLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~--~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+.+++ +..-+.+-... ......+++|||++|.+|.+...-..... +...+...+.++. +..+|..|++|
T Consensus 57 ~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h 131 (268)
T cd06624 57 ALHSYLK----HRNIVQYLGSD-SENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVH 131 (268)
T ss_pred HHHHhcC----CCCeeeeeeee-ccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 6665543 22222222211 12244679999999999988643221223 4444444444444 67889999999
Q ss_pred cCCCCCCCCCC----eeEEecCCchhh
Q psy12972 564 ADPHSGNDVNT----WLYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~----~v~liDfG~~~~ 586 (1578)
+|++|.||++. .+++.|||....
T Consensus 132 ~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 132 RDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred cCCCHHHEEEcCCCCeEEEecchhhee
Confidence 99999999974 589999997643
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.7e-07 Score=109.84 Aligned_cols=135 Identities=21% Similarity=0.231 Sum_probs=90.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|+.|.||+|+.+ +|+.||||..+....... . ..+.+|.
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~---------------------~---------------~~~~~E~ 54 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGA---------------------P---------------FTAIREA 54 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCC---------------------c---------------hhHHHHH
Confidence 68999999999999976 789999998765332100 0 0123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+..++. .....++||||++| .+.++..-....++...+...+.+++ +..+|..|++|+|
T Consensus 55 ~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~d 128 (291)
T cd07844 55 SLLKDLK----HANIVTLHDIIH-TKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRD 128 (291)
T ss_pred HHHhhCC----CcceeeEEEEEe-cCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence 5555543 222233333332 22346899999987 66654322223466666666665555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 129 l~p~nil~~~~~~~kl~dfg~~~ 151 (291)
T cd07844 129 LKPQNLLISERGELKLADFGLAR 151 (291)
T ss_pred CCHHHEEEcCCCCEEECcccccc
Confidence 999999965 48999999754
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >KOG0588|consensus | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.6e-07 Score=115.30 Aligned_cols=130 Identities=14% Similarity=0.134 Sum_probs=93.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchh------hhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDL------RERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQEL 481 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i------~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 481 (1578)
+-||.||-|.|-.|+.. +|+.+||||..... ...|+.++.+|+
T Consensus 18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMk------------------------------ 67 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMK------------------------------ 67 (786)
T ss_pred ccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHH------------------------------
Confidence 46899999999999964 89999999985331 112222222222
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 482 DFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 482 Df~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
.+.|.+-+..-.| |+-.+.-+||.||++|+.|-|.. +...++...+.++-+.+++ +...|..
T Consensus 68 --------------Li~HpnVl~LydV-we~~~~lylvlEyv~gGELFdyl-v~kG~l~e~eaa~ff~QIi~gv~yCH~~ 131 (786)
T KOG0588|consen 68 --------------LIEHPNVLRLYDV-WENKQHLYLVLEYVPGGELFDYL-VRKGPLPEREAAHFFRQILDGVSYCHAF 131 (786)
T ss_pred --------------HhcCCCeeeeeee-eccCceEEEEEEecCCchhHHHH-HhhCCCCCHHHHHHHHHHHHHHHHHhhh
Confidence 1233333333333 34445668999999999998874 3556677778887777766 7788999
Q ss_pred CccccCCCCCCCCCC---eeEEecCCch
Q psy12972 560 GFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 560 G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
+++|+|++|.|+|+. .+++-|||++
T Consensus 132 ~icHRDLKpENlLLd~~~nIKIADFGMA 159 (786)
T KOG0588|consen 132 NICHRDLKPENLLLDVKNNIKIADFGMA 159 (786)
T ss_pred cceeccCCchhhhhhcccCEeeecccee
Confidence 999999999999953 5999999986
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.3e-07 Score=108.70 Aligned_cols=138 Identities=14% Similarity=0.149 Sum_probs=88.1
Q ss_pred cccccccceEEEEEEe----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVT----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|+. .+|+.||||+.+...... . ....-.+.
T Consensus 6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~---~------------------------------~~~~~~~~ 52 (288)
T cd05583 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQ---K------------------------------AKTAEHTR 52 (288)
T ss_pred EEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHh---h------------------------------hhHHHHHH
Confidence 5799999999999984 368899999876321100 0 00011234
Q ss_pred HHHHHHHHHHHhhCCCCCe-eecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 485 NEGRNAERCSKDLAHLPYV-YIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v-~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+|.+.+.++. +++.+ .+...+ ......+|||||++|.++.+... ....++...+...+.++. +..+|..|+
T Consensus 53 ~E~~~l~~~~----~~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~~~~ 126 (288)
T cd05583 53 TERQVLEAVR----RCPFLVTLHYAF-QTDTKLHLILDYVNGGELFTHLY-QREHFTESEVRVYIAEIVLALDHLHQLGI 126 (288)
T ss_pred HHHHHHHhcc----CCcchhhhheee-ecCCEEEEEEecCCCCcHHHHHh-hcCCcCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 5555555543 22222 111122 22334579999999998876532 223455565555554444 678899999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|+|++|.||++. .++++|||...
T Consensus 127 ~H~dl~p~nil~~~~~~~~l~dfg~~~ 153 (288)
T cd05583 127 IYRDIKLENILLDSEGHVVLTDFGLSK 153 (288)
T ss_pred eccCCCHHHeEECCCCCEEEEECcccc
Confidence 9999999999965 58999999753
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=98.57 E-value=3.1e-07 Score=104.59 Aligned_cols=139 Identities=19% Similarity=0.135 Sum_probs=92.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++|+.|++|.||+|+.. +|+.|+||+........ . ..-.+..|.
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~------~~~~~~~e~ 50 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSE-----------------------------E------ELEALEREI 50 (260)
T ss_pred eEeeecCceEEEEEEECCCCcEEEEEEeeccccch-----------------------------H------HHHHHHHHH
Confidence 68999999999999976 79999999986543210 0 001224444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..++++. +..-+.+.....+.. ...+++|||++|.+|.++..- ...++...+...+.+++ +..+|..|++|+
T Consensus 51 ~~l~~l~----~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~ 125 (260)
T cd06606 51 RILSSLQ----HPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKK-FGKLPEPVIRKYTRQILEGLAYLHSNGIVHR 125 (260)
T ss_pred HHHHHcC----CCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 4555443 222222222322211 456899999999999887432 22566666666555555 678999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|++|.||++. .++++|||....+
T Consensus 126 dl~p~ni~i~~~~~~~l~d~~~~~~~ 151 (260)
T cd06606 126 DIKGANILVDSDGVVKLADFGCAKRL 151 (260)
T ss_pred CCCHHHEEEcCCCCEEEcccccEEec
Confidence 9999999965 5899999975433
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=98.57 E-value=3.2e-07 Score=107.02 Aligned_cols=137 Identities=18% Similarity=0.092 Sum_probs=90.3
Q ss_pred cccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 411 lasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
||.|++|.||+|... +|+.||||+........ -..+-.+..|.+.
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~~~~~~~~~e~~~ 46 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKK----------------------------------RKGEQMALNEKKI 46 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhh----------------------------------hhhhHHHHHHHHH
Confidence 689999999999854 79999999876421110 0011233456666
Q ss_pred HHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 490 AERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 490 ~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
+.+++ +..-+.+...+. .....+|||||++|.+|.+...-.. ..++...+...+.+++ +..+|..|++|+|+
T Consensus 47 l~~l~----~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di 121 (277)
T cd05577 47 LEKVS----SRFIVSLAYAFE-TKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDL 121 (277)
T ss_pred HHhCC----CCCEeeeeeEEe-cCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 65553 222233333332 2345689999999999987643211 2466555555544544 67899999999999
Q ss_pred CCCCCCCC---eeEEecCCchhh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~~ 586 (1578)
+|.||++. .++++|||....
T Consensus 122 ~p~Nil~~~~~~~~l~dfg~~~~ 144 (277)
T cd05577 122 KPENVLLDDHGNVRISDLGLAVE 144 (277)
T ss_pred CHHHEEECCCCCEEEccCcchhh
Confidence 99999975 589999997643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.6e-07 Score=106.62 Aligned_cols=142 Identities=18% Similarity=0.132 Sum_probs=94.3
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+. .+|+.||||+.++...... .+ ....-++.+|+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~-~~------------------------------~~~~~~~~~e~ 54 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSS-EQ------------------------------EEVVEALRKEI 54 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCch-hH------------------------------HHHHHHHHHHH
Confidence 5689999999999985 5899999999764321100 00 00112346677
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.+++ +..-+.+...+. ......++|||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 55 ~~l~~l~----h~~iv~~~~~~~-~~~~~~~v~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~ 128 (268)
T cd06630 55 RLMARLN----HPHIIRMLGATC-EDSHFNLFVEWMAGGSVSHLLS-KYGAFKEAVIINYTEQLLRGLSYLHENQIIHRD 128 (268)
T ss_pred HHHHHcC----CCceehhhceec-cCCeEEEEEeccCCCcHHHHHH-HhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 7776653 222233333322 2234579999999999988743 223456566555555555 6889999999999
Q ss_pred CCCCCCCCC----eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT----WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~----~v~liDfG~~~~l 587 (1578)
++|.||++. .++++|||...++
T Consensus 129 i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 129 VKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred CCHHHEEEcCCCCEEEEccccccccc
Confidence 999999963 4899999976544
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd03002 PDI_a_MPD1_like PDI family, MPD1-like subfamily; composed of eukaryotic proteins similar to Saccharomyces cerevisiae MPD1 protein, which contains a single redox active TRX domain located at the N-terminus, and an ER retention signal at the C-terminus indicative of an ER-resident protein | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.6e-08 Score=101.11 Aligned_cols=78 Identities=27% Similarity=0.344 Sum_probs=57.2
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeec---ccCccccccCCcccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYD---LFGTTDGFSGQDSASRN 824 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~---~~~~~~~i~g~~~~~~~ 824 (1578)
.++..+|+..+.+ ++++++|.||||||++|+++.|.|+++|+.+.+. .+..++|..+ .+|...++
T Consensus 4 ~l~~~~~~~~i~~--~~~~~lv~f~a~wC~~C~~~~~~~~~~a~~~~~~~~~~~v~~~~~~~~~~~~~~~i--------- 72 (109)
T cd03002 4 ELTPKNFDKVVHN--TNYTTLVEFYAPWCGHCKNLKPEYAKAAKELDGLVQVAAVDCDEDKNKPLCGKYGV--------- 72 (109)
T ss_pred EcchhhHHHHHhc--CCCeEEEEEECCCCHHHHhhChHHHHHHHHhcCCceEEEEecCccccHHHHHHcCC---------
Confidence 4566788888753 5778999999999999999999999999999864 4455555432 13444444
Q ss_pred ccccccCcccccccccc
Q psy12972 825 FHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 825 ~~~i~~~Ptiklf~~~~ 841 (1578)
..+|++.+|..+-
T Consensus 73 ----~~~Pt~~~~~~~~ 85 (109)
T cd03002 73 ----QGFPTLKVFRPPK 85 (109)
T ss_pred ----CcCCEEEEEeCCC
Confidence 3448988888663
|
MPD1 has been shown to suppress the maturation defect of carboxypeptidase Y caused by deletion of the yeast PDI1 gene. Other characterized members of this subfamily include the Aspergillus niger prpA protein and Giardia PDI-1. PrpA is non-essential to strain viability, however, its transcript level is induced by heterologous protein expression suggesting a possible role in oxidative protein folding during high protein production. Giardia PDI-1 has the ability to refold scrambled RNase and exhibits transglutaminase activity. |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.8e-07 Score=115.21 Aligned_cols=127 Identities=10% Similarity=0.070 Sum_probs=85.7
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.... .+.+|+
T Consensus 98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~-------------------------------------------~~~~E~ 134 (391)
T PHA03212 98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQRG-------------------------------------------GTATEA 134 (391)
T ss_pred EEEcCCCCeEEEEEEECCCCCEEEEechhhh-------------------------------------------hhHHHH
Confidence 6799999999999996 47999999953100 013455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-|.+-..+. .....++|||++.| .+.+... ...+++..++...+.+++ +..+|..|++|+|
T Consensus 135 ~il~~l~----HpnIv~~~~~~~-~~~~~~lv~e~~~~-~L~~~l~-~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrD 207 (391)
T PHA03212 135 HILRAIN----HPSIIQLKGTFT-YNKFTCLILPRYKT-DLYCYLA-AKRNIAICDILAIERSVLRAIQYLHENRIIHRD 207 (391)
T ss_pred HHHHhCC----CCCCCCEeEEEE-ECCeeEEEEecCCC-CHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 5555543 333333333332 23456899999965 4433321 234566666666555555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||+|||+. .++++|||...
T Consensus 208 iKP~NIll~~~~~vkL~DFG~a~ 230 (391)
T PHA03212 208 IKAENIFINHPGDVCLGDFGAAC 230 (391)
T ss_pred CChHhEEEcCCCCEEEEeCCccc
Confidence 999999974 59999999763
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.5e-07 Score=107.91 Aligned_cols=134 Identities=16% Similarity=0.146 Sum_probs=89.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+...... . .-.+.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----------------------~--------------~~~~~~E~ 49 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEG----------------------T--------------PSTAIREI 49 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEEEEEEeccccccc----------------------c--------------hHHHHHHH
Confidence 67899999999999975 79999999886432110 0 00123466
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHhh--cCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLLE--KGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~~--~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
..+.++. + +. +++++.. .....+|||||++| .+.+...... ..++...+...+.+++ +..+|..|+
T Consensus 50 ~~l~~l~----h-~~--i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 121 (284)
T cd07836 50 SLMKELK----H-EN--IVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRV 121 (284)
T ss_pred HHHHhhc----C-CC--EeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 6665553 2 22 3333322 23456899999987 5555422111 2356666666665555 678999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|++|.||++. .+++.|||....
T Consensus 122 ~h~dl~p~ni~~~~~~~~~l~d~g~~~~ 149 (284)
T cd07836 122 LHRDLKPQNLLINKRGELKLADFGLARA 149 (284)
T ss_pred eeCCCCHHHEEECCCCcEEEeecchhhh
Confidence 9999999999975 589999997643
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=98.57 E-value=3.7e-07 Score=108.22 Aligned_cols=135 Identities=19% Similarity=0.150 Sum_probs=86.5
Q ss_pred cccccccceEEEEEEec-CCCEE--EEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEV--AVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~V--AVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
+.||.|++|+||+|+.+ +|..+ |+|......... ..-++.+
T Consensus 13 ~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~------------------------------------~~~~~~~ 56 (303)
T cd05088 13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD------------------------------------DHRDFAG 56 (303)
T ss_pred eeecCCCCceEEEEEEccCCceeeEEEEEecccCCHH------------------------------------HHHHHHH
Confidence 67999999999999965 67655 555433211100 0112345
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhh---------------cCCCHHHHHHHH
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLE---------------KGFSLADVDRKL 548 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~---------------~~~~~~~v~~~l 548 (1578)
|...+.++. +++. |++++. ......+|+|||++|.+|.++..-.. ..++...+...+
T Consensus 57 Ei~~l~~l~----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 130 (303)
T cd05088 57 ELEVLCKLG----HHPN--IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 130 (303)
T ss_pred HHHHHHHhc----CCCC--cceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHH
Confidence 555555552 2232 233332 23345689999999999887643111 124555555555
Q ss_pred HHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 549 FTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 549 ~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
.++. ++.+|..|++|+|++|.|||++ .++++|||...
T Consensus 131 ~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~ 172 (303)
T cd05088 131 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 172 (303)
T ss_pred HHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCc
Confidence 5544 6788999999999999999975 48999999763
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >PTZ00443 Thioredoxin domain-containing protein; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.3e-08 Score=114.64 Aligned_cols=82 Identities=23% Similarity=0.356 Sum_probs=57.6
Q ss_pred ccccccccccccccCC--ccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeecc-cCccccccCCcccc
Q psy12972 747 KLSTTHWNFEKNYIPK--SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYDL-FGTTDGFSGQDSAS 822 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~--~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~~-~~~~~~i~g~~~~~ 822 (1578)
...+++.||++.+..+ ..+++|+|+||||||+||++++|+|+++|+.+++. .++.++|.... +|+..
T Consensus 32 Vv~Lt~~nF~~~v~~~~~~~~~~vlV~FyApWC~~Ck~~~P~~e~la~~~~~~v~~~~VD~~~~~~l~~~~--------- 102 (224)
T PTZ00443 32 LVLLNDKNFEKLTQASTGATTGPWFVKFYAPWCSHCRKMAPAWERLAKALKGQVNVADLDATRALNLAKRF--------- 102 (224)
T ss_pred cEECCHHHHHHHHhhhcccCCCCEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEecCcccHHHHHHc---------
Confidence 4566778999877543 24689999999999999999999999999999864 33333332111 33333
Q ss_pred ccccccccCcccccccccc
Q psy12972 823 RNFHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 823 ~~~~~i~~~Ptiklf~~~~ 841 (1578)
.+..+||+.+|.+|.
T Consensus 103 ----~I~~~PTl~~f~~G~ 117 (224)
T PTZ00443 103 ----AIKGYPTLLLFDKGK 117 (224)
T ss_pred ----CCCcCCEEEEEECCE
Confidence 344559988887653
|
|
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.3e-07 Score=108.77 Aligned_cols=138 Identities=17% Similarity=0.154 Sum_probs=91.0
Q ss_pred cccccccceEEEEEEec--------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK--------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQE 480 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 480 (1578)
++||.|++|.||+|+.. +++.||+|+..+..... + .
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~---~---------------------------------~ 67 (307)
T cd05098 24 KPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEK---D---------------------------------L 67 (307)
T ss_pred eeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChH---H---------------------------------H
Confidence 68999999999999742 34679999987653210 0 0
Q ss_pred HhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------cCCCHHHHH
Q psy12972 481 LDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------------KGFSLADVD 545 (1578)
Q Consensus 481 lDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------------~~~~~~~v~ 545 (1578)
-++..|...+.++. .+..-+.+...+. .....+|||||++|.+|.++..... ..++...+.
T Consensus 68 ~~~~~e~~~l~~l~---~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 143 (307)
T cd05098 68 SDLISEMEMMKMIG---KHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLV 143 (307)
T ss_pred HHHHHHHHHHHHhc---CCCCEeeEEEEEe-cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHH
Confidence 12344555555442 1222233333332 2345789999999999987743211 124555566
Q ss_pred HHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 546 RKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 546 ~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
..+.+++ ++.+|..|++|+|++|.||+++ .++++|||....
T Consensus 144 ~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~ 189 (307)
T cd05098 144 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 189 (307)
T ss_pred HHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCccccc
Confidence 6555555 7889999999999999999965 489999997643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=98.56 E-value=2e-07 Score=108.78 Aligned_cols=136 Identities=18% Similarity=0.154 Sum_probs=87.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||+|++|+||+|+.+ +|+.||||+.+...... .. .-.+.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~~------~~~~~~e~ 50 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEE-----------------------------GV------PSTAIREI 50 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEeccccccC-----------------------------Cc------hHHHHHHH
Confidence 57899999999999975 79999999875321110 00 01123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh--cCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE--KGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~--~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
..+.++. +..-+.+...+.+ ....++||||++| .+.+...... ..++...+...+.+++ +..+|..|++|
T Consensus 51 ~~l~~l~----h~~i~~~~~~~~~-~~~~~~v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H 124 (285)
T cd07861 51 SLLKELQ----HPNIVCLQDVLMQ-ESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLH 124 (285)
T ss_pred HHHHhcC----CCCEeeeEEEEee-CCeEEEEEecCCC-CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 5555543 2222333333322 3456899999986 4544422111 3456666665555555 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|.||++. .+++.|||...
T Consensus 125 ~dl~p~nil~~~~~~~~l~dfg~~~ 149 (285)
T cd07861 125 RDLKPQNLLIDNKGVIKLADFGLAR 149 (285)
T ss_pred cCCCHHHEEEcCCCcEEECccccee
Confidence 99999999964 58999999764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.6e-07 Score=107.49 Aligned_cols=139 Identities=16% Similarity=0.073 Sum_probs=91.7
Q ss_pred cccccccceEEEEEEec-----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTK-----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|.||+|+.. +|+.||||+..+.... ..+-+|
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~------------------------------------~~~~~~ 53 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE------------------------------------QHRSDF 53 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch------------------------------------HHHHHH
Confidence 67899999999999864 4789999998654321 011234
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|.+.+.++. +..-+.+....... ....+|+|||++|.++.+...-....++...+...+.++. +..+|..|
T Consensus 54 ~~ei~~l~~l~----~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~ 129 (284)
T cd05038 54 EREIEILRTLD----HENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQR 129 (284)
T ss_pred HHHHHHHHhCC----CCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence 55555444432 22112222222111 1245899999999999887432222366666666555554 67899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|+|++|.||++. .+++.|||....+
T Consensus 130 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 130 YIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred eecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 99999999999964 4888999876443
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.56 E-value=4.1e-07 Score=104.47 Aligned_cols=135 Identities=19% Similarity=0.148 Sum_probs=90.8
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|... |+.||||+...... ..-.+..|..
T Consensus 12 ~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~--------------------------------------~~~~~~~e~~ 52 (256)
T cd05039 12 ATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST--------------------------------------AAQAFLAEAS 52 (256)
T ss_pred eeeecCCCceEEEEEec-CcEEEEEEeccchh--------------------------------------HHHHHHHHHH
Confidence 67999999999999864 89999998753321 0011234444
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++. +...+.+...+.+ .+...+||||++|.++.+...... ..++...+...+.+++ +..+|..|++|+|
T Consensus 53 ~l~~l~----~~~i~~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~d 127 (256)
T cd05039 53 VMTTLR----HPNLVQLLGVVLQ-GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRD 127 (256)
T ss_pred HHHhcC----CcceeeeEEEEcC-CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchh
Confidence 444442 2222333333322 566789999999999988643221 1356666655555554 6789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|+||++. .++++|||.....
T Consensus 128 i~p~Nili~~~~~~~l~d~g~~~~~ 152 (256)
T cd05039 128 LAARNVLVSEDLVAKVSDFGLAKEA 152 (256)
T ss_pred cccceEEEeCCCCEEEccccccccc
Confidence 999999965 4899999976543
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.6e-07 Score=106.97 Aligned_cols=143 Identities=17% Similarity=0.199 Sum_probs=97.0
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
..+.|... ++++.|++|+||+|... +|+.||+|+......
T Consensus 17 ~~~~~~~~--~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------------------------------------- 57 (286)
T cd06614 17 PRELYKNL--EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ------------------------------------- 57 (286)
T ss_pred ccccchHh--HhccCCCCeEEEEEEEccCCcEEEEEEEecCch-------------------------------------
Confidence 34445444 68999999999999976 799999999864321
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
.+-.+..|.+.+.++. +...+.+...+. .....+++|||++|.+|.++.......++...+...+.+++ +..
T Consensus 58 -~~~~~~~e~~~l~~l~----~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~ 131 (286)
T cd06614 58 -NKELIINEILIMKDCK----HPNIVDYYDSYL-VGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEY 131 (286)
T ss_pred -hHHHHHHHHHHHHHCC----CCCeeEEEEEEE-ECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHH
Confidence 0011233444443332 222233333332 23567899999999999987543222567666666665555 678
Q ss_pred HHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 556 IFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|..|++|+|++|.||++. .++++|||....
T Consensus 132 lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~ 165 (286)
T cd06614 132 LHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQ 165 (286)
T ss_pred HHhCCeeeCCCChhhEEEcCCCCEEECccchhhh
Confidence 8999999999999999965 589999996543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=98.56 E-value=4.1e-07 Score=104.76 Aligned_cols=135 Identities=16% Similarity=0.122 Sum_probs=88.0
Q ss_pred ccccccceEEEEEEe---cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 410 PIAAASLAQVFRAVT---KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 410 PlasaSiaQVhrA~l---~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
-||.|++|.||+|.. .+++.||||+........ . ..-++..|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~-------------------------~----------~~~~~~~e 46 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDP-------------------------A----------LKDELLRE 46 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcH-------------------------H----------HHHHHHHH
Confidence 479999999999975 368899999875332110 0 00123444
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..-+.++ .+...+.+-.... ....+|||||++|.+|.++.. ....++...+...+.++. ++.+|..|++|+
T Consensus 47 ~~~l~~l----~h~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~ 119 (257)
T cd05116 47 ANVMQQL----DNPYIVRMIGICE--AESWMLVMELAELGPLNKFLQ-KNKHVTEKNITELVHQVSMGMKYLEETNFVHR 119 (257)
T ss_pred HHHHHhC----CCCCcceEEEEEc--CCCcEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCEeec
Confidence 4444443 2222222222221 234579999999999987643 223456666666555555 688999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+||.||++. .+++.|||....
T Consensus 120 dlkp~nill~~~~~~kl~Dfg~~~~ 144 (257)
T cd05116 120 DLAARNVLLVTQHYAKISDFGLSKA 144 (257)
T ss_pred ccchhhEEEcCCCeEEECCCccccc
Confidence 9999999965 488999997643
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.8e-07 Score=110.33 Aligned_cols=141 Identities=20% Similarity=0.189 Sum_probs=90.9
Q ss_pred hhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHH
Q psy12972 400 SQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLE 478 (1578)
Q Consensus 400 ~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 478 (1578)
.+.+..+ ..||.|++|.||+|... +|+.||||+..-.....
T Consensus 21 ~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------ 62 (292)
T cd06658 21 REYLDSF--IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR------------------------------------ 62 (292)
T ss_pred HHHHhhh--hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHH------------------------------------
Confidence 3444554 56999999999999964 78999999763211100
Q ss_pred HHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHH
Q psy12972 479 QELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQI 556 (1578)
Q Consensus 479 ~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i 556 (1578)
.-.+.+|...+..+. +..-+.+...+. .....++||||++|..+.++. ....++...+...+.+++ +..+
T Consensus 63 -~~~~~~e~~~l~~l~----h~~ii~~~~~~~-~~~~~~lv~e~~~~~~L~~~~--~~~~l~~~~~~~~~~qi~~~l~~L 134 (292)
T cd06658 63 -RELLFNEVVIMRDYH----HENVVDMYNSYL-VGDELWVVMEFLEGGALTDIV--THTRMNEEQIATVCLSVLRALSYL 134 (292)
T ss_pred -HHHHHHHHHHHHhCC----CCcHHHHHHhee-cCCeEEEEEeCCCCCcHHHHH--hcCCCCHHHHHHHHHHHHHHHHHH
Confidence 001233333333321 111111111111 224568999999999998763 344566666666665555 7889
Q ss_pred HHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 557 FQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 557 ~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|..|++|+|++|.||++. .++++|||....
T Consensus 135 H~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (292)
T cd06658 135 HNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQ 167 (292)
T ss_pred HHCCEeecCCCHHHEEEcCCCCEEEccCcchhh
Confidence 999999999999999975 599999997643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.3e-07 Score=106.24 Aligned_cols=134 Identities=16% Similarity=0.105 Sum_probs=89.3
Q ss_pred cccccccceEEEEEEecCC----CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTKEG----VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G----~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+..++ ..||||+.+...... ..-.|.
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~------------------------------------~~~~~~ 55 (270)
T cd05056 12 RCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPS------------------------------------VREKFL 55 (270)
T ss_pred eeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHH------------------------------------HHHHHH
Confidence 6799999999999997543 468999765433110 001234
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++ .+...+.+..++. .....++|||++|.+|.+...-....++...+...+.+++ +..+|..|++
T Consensus 56 ~e~~~l~~~----~h~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ 129 (270)
T cd05056 56 QEAYIMRQF----DHPHIVKLIGVIT--ENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFV 129 (270)
T ss_pred HHHHHHHhC----CCCchhceeEEEc--CCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 555555554 2322333333332 2456799999999999887432223456555555444444 6788999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCch
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~ 584 (1578)
|+|++|.||++. .++++|||..
T Consensus 130 H~dl~p~nili~~~~~~~l~d~g~~ 154 (270)
T cd05056 130 HRDIAARNVLVSSPDCVKLGDFGLS 154 (270)
T ss_pred ccccChheEEEecCCCeEEccCcee
Confidence 999999999975 4899999965
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.9e-07 Score=109.91 Aligned_cols=139 Identities=18% Similarity=0.164 Sum_probs=91.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|... +|+.||||+.+......-. ++ .+-.+..|+
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~--------------------------~~------~~~~~~~e~ 53 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAK--------------------------DG------INFTALREI 53 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEecccccccc--------------------------ch------hhHHHHHHH
Confidence 46899999999999965 7999999988654321000 00 011224455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+...+.+ ....++||||+ |..|.++..-....++...+...+.+++ +..+|..|++|+|
T Consensus 54 ~~l~~~~----h~~i~~~~~~~~~-~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~d 127 (298)
T cd07841 54 KLLQELK----HPNIIGLLDVFGH-KSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRD 127 (298)
T ss_pred HHHhhcC----CCCChhhhheeec-CCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecC
Confidence 5555543 2222333333332 34568999999 7787766321111367666666665555 7789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 128 l~p~nill~~~~~~~l~dfg~~~ 150 (298)
T cd07841 128 LKPNNLLIASDGVLKLADFGLAR 150 (298)
T ss_pred CChhhEEEcCCCCEEEccceeee
Confidence 999999965 48889999764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.4e-07 Score=113.54 Aligned_cols=48 Identities=19% Similarity=0.090 Sum_probs=36.5
Q ss_pred CCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 539 FSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 539 ~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++...+...+.++. +..+|..|++|+|++|.|||++ .+++.|||....
T Consensus 209 l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~ 261 (374)
T cd05106 209 LDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARD 261 (374)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeee
Confidence 34444555555544 7889999999999999999965 489999997643
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd02992 PDI_a_QSOX PDIa family, Quiescin-sulfhydryl oxidase (QSOX) subfamily; QSOX is a eukaryotic protein containing an N-terminal redox active TRX domain, similar to that of PDI, and a small C-terminal flavin adenine dinucleotide (FAD)-binding domain homologous to the yeast ERV1p protein | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.1e-08 Score=101.64 Aligned_cols=79 Identities=20% Similarity=0.304 Sum_probs=56.5
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC----Ccceeeeeecc---cCccccccCCcc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL----GVGFFTVHYDL---FGTTDGFSGQDS 820 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~----~vg~v~~~~~~---~~~~~~i~g~~~ 820 (1578)
..++..+|.+.+.. ++++++|.||||||++|+.+.|.|+++++.+++. .++.++|..+. +|+..++
T Consensus 4 ~~l~~~~f~~~i~~--~~~~vvV~f~a~wC~~C~~~~~~~~~la~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i----- 76 (114)
T cd02992 4 IVLDAASFNSALLG--SPSAWLVEFYASWCGHCRAFAPTWKKLARDLRKWRPVVRVAAVDCADEENVALCRDFGV----- 76 (114)
T ss_pred EECCHHhHHHHHhc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHHHhcCCceEEEEEeccchhhHHHHHhCCC-----
Confidence 35566788888754 4489999999999999999999999999999753 23344443221 3444444
Q ss_pred ccccccccccCcccccccccc
Q psy12972 821 ASRNFHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 821 ~~~~~~~i~~~Ptiklf~~~~ 841 (1578)
..+|++.+|+.+.
T Consensus 77 --------~~~Pt~~lf~~~~ 89 (114)
T cd02992 77 --------TGYPTLRYFPPFS 89 (114)
T ss_pred --------CCCCEEEEECCCC
Confidence 4449998988765
|
QSOX oxidizes thiol groups to disulfides like PDI, however, unlike PDI, this oxidation is accompanied by the reduction of oxygen to hydrogen peroxide. QSOX is localized in high concentrations in cells with heavy secretory load and prefers peptides and proteins as substrates, not monothiols like glutathione. Inside the cell, QSOX is found in the endoplasmic reticulum and Golgi. The flow of reducing equivalents in a QSOX-catalyzed reaction goes from the dithiol substrate - dithiol of the QSOX TRX domain - dithiols of the QSOX ERV1p domain - FAD - oxygen. |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=98.55 E-value=5.5e-07 Score=105.72 Aligned_cols=133 Identities=19% Similarity=0.150 Sum_probs=89.5
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+..-..... .+ .+.+|+
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~-------------------------------~~------~~~~e~ 67 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQR-------------------------------RE------LLFNEV 67 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhH-------------------------------HH------HHHHHH
Confidence 7999999999999995 479999999753110000 00 123343
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.-+.++ .+..-+.+...+ ......+++|||++|.+|.+.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 68 ~~l~~~----~h~~vv~~~~~~-~~~~~~~~v~e~~~~~~L~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~d 140 (285)
T cd06648 68 VIMRDY----QHPNIVEMYSSY-LVGDELWVVMEFLEGGALTDIV--THTRMNEEQIATVCLAVLKALSFLHAQGVIHRD 140 (285)
T ss_pred HHHHHc----CCCChheEEEEE-EcCCeEEEEEeccCCCCHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 333333 222223333322 2345678999999999998763 335566666666665555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 141 l~p~Nil~~~~~~~~l~d~g~~~ 163 (285)
T cd06648 141 IKSDSILLTSDGRVKLSDFGFCA 163 (285)
T ss_pred CChhhEEEcCCCcEEEcccccch
Confidence 999999965 58999999654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >PHA02125 thioredoxin-like protein | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.2e-07 Score=88.63 Aligned_cols=69 Identities=22% Similarity=0.408 Sum_probs=54.1
Q ss_pred EEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCC-CCCHHHHH
Q psy12972 877 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEP-SFSVQKMV 955 (1578)
Q Consensus 877 LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G-~~s~~~L~ 955 (1578)
+|.||++||++|+.+.|.+++++ +.+++||++.+.+++++|+|.+ +||++ +|+......| ..+..+|.
T Consensus 2 iv~f~a~wC~~Ck~~~~~l~~~~-------~~~~~vd~~~~~~l~~~~~v~~-~PT~~---~g~~~~~~~G~~~~~~~l~ 70 (75)
T PHA02125 2 IYLFGAEWCANCKMVKPMLANVE-------YTYVDVDTDEGVELTAKHHIRS-LPTLV---NTSTLDRFTGVPRNVAELK 70 (75)
T ss_pred EEEEECCCCHhHHHHHHHHHHHh-------heEEeeeCCCCHHHHHHcCCce-eCeEE---CCEEEEEEeCCCCcHHHHH
Confidence 68999999999999999987653 4688999999999999999998 99987 5655444445 23434444
Q ss_pred H
Q psy12972 956 E 956 (1578)
Q Consensus 956 ~ 956 (1578)
+
T Consensus 71 ~ 71 (75)
T PHA02125 71 E 71 (75)
T ss_pred H
Confidence 3
|
|
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.6e-07 Score=109.63 Aligned_cols=138 Identities=17% Similarity=0.166 Sum_probs=91.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+...... +.. -.+.+|.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~-----------------------------~~~------~~~~~e~ 51 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDE-----------------------------DVK------KTALREV 51 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhcccc-----------------------------cch------hHHHHHH
Confidence 57999999999999976 68999999875432100 000 1234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+..++.. ....++||||++|..+..+.. ...+++...+...+.+++ +..+|..|++|+|
T Consensus 52 ~~l~~l~----~~~i~~~~~~~~~-~~~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~d 125 (288)
T cd07833 52 KVLRQLR----HENIVNLKEAFRR-KGRLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRD 125 (288)
T ss_pred HHHHhcC----CCCeeehhheEEE-CCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 5555543 2222333333322 244689999999866654422 234567766666665555 7789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|.||++. .+++.|||....+
T Consensus 126 l~~~ni~~~~~~~~kl~d~g~~~~~ 150 (288)
T cd07833 126 IKPENILVSESGVLKLCDFGFARAL 150 (288)
T ss_pred CCHHHeEECCCCCEEEEeeeccccc
Confidence 999999964 5889999975443
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.9e-07 Score=107.79 Aligned_cols=149 Identities=19% Similarity=0.189 Sum_probs=97.0
Q ss_pred hCCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHH
Q psy12972 395 FGCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINEL 473 (1578)
Q Consensus 395 lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 473 (1578)
++..++++|..+. -||.|++|.||+|+.. +|+.||||+........-
T Consensus 15 ~~~~~~~~~~~~~--~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~------------------------------ 62 (313)
T cd06633 15 YKDDPEEIFVGLH--EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTN------------------------------ 62 (313)
T ss_pred ccCCHHHHhhcce--eeccCCCeEEEEEEECCCCcEEEEEEEeccccCch------------------------------
Confidence 4567788887774 4999999999999964 789999998753211100
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH-
Q psy12972 474 KVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF- 552 (1578)
Q Consensus 474 ~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~- 552 (1578)
....++..|.+.+++++ +...+.+..++.+ ....+|||||+.| .+.+........++...+...+.+++
T Consensus 63 ----~~~~~~~~E~~~l~~l~----h~~iv~~~~~~~~-~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~ 132 (313)
T cd06633 63 ----EKWQDIIKEVKFLQQLK----HPNTIEYKGCYLK-EHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQ 132 (313)
T ss_pred ----HHHHHHHHHHHHHHhCC----CCCCccEEEEEEe-CCEEEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 00012344555555543 3333444444332 2456899999976 44444322233456666555554444
Q ss_pred -HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 553 -AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 553 -l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.||++. .++++|||...
T Consensus 133 al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~ 169 (313)
T cd06633 133 GLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSAS 169 (313)
T ss_pred HHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCc
Confidence 6888999999999999999965 58999999753
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.4e-07 Score=105.75 Aligned_cols=138 Identities=17% Similarity=0.120 Sum_probs=89.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+-... + ...+.+|.+|.
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-----------------------~-----------~~~~~~~~~e~ 53 (267)
T cd08228 8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMM-----------------------D-----------AKARQDCVKEI 53 (267)
T ss_pred eeeccCCCeeEEEEEEeCCCCEEEEEEeeccccC-----------------------C-----------HHHHHHHHHHH
Confidence 56899999999999965 8999999976431100 0 01123455566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh---hcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL---EKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~---~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+.+.++. +...+.+...+.+ .....++|||++|.++.++.... ...++...+...+.++. +..+|..|++
T Consensus 54 ~~l~~l~----h~~i~~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~ 128 (267)
T cd08228 54 DLLKQLN----HPNVIKYLDSFIE-DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVM 128 (267)
T ss_pred HHHHhCC----CcceeeeeeeEEE-CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCee
Confidence 5555543 2222222222221 23457999999999988764321 12245555555554444 6788999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.||+++ .+.++|||...
T Consensus 129 H~dl~~~nil~~~~~~~~l~d~g~~~ 154 (267)
T cd08228 129 HRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred CCCCCHHHEEEcCCCCEEECccccce
Confidence 999999999976 48999999654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.9e-07 Score=108.03 Aligned_cols=135 Identities=19% Similarity=0.220 Sum_probs=85.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+......... +..+.+|+
T Consensus 11 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~------------------------------------~~~~~~e~ 54 (291)
T cd07870 11 EKLGEGSYATVYKGISRINGQLVALKVISMKTEEGV------------------------------------PFTAIREA 54 (291)
T ss_pred EEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCC------------------------------------cHHHHHHH
Confidence 67999999999999864 799999998753321100 11224455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++. +...+.+-.... .....++||||++| .+.+.............+...+.++. +..+|..|++|+|
T Consensus 55 ~~l~~l~----h~ni~~~~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d 128 (291)
T cd07870 55 SLLKGLK----HANIVLLHDIIH-TKETLTFVFEYMHT-DLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRD 128 (291)
T ss_pred HHHHhcC----CCCEeEEEEEEe-cCCeEEEEEecccC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 5554442 222233333322 23457899999975 44333221223345555554444444 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||+++ .++++|||...
T Consensus 129 lkp~Nil~~~~~~~~l~Dfg~~~ 151 (291)
T cd07870 129 LKPQNLLISYLGELKLADFGLAR 151 (291)
T ss_pred CChHHEEEcCCCcEEEecccccc
Confidence 999999965 58999999653
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=98.54 E-value=3.5e-07 Score=108.43 Aligned_cols=140 Identities=14% Similarity=0.067 Sum_probs=92.8
Q ss_pred CcccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHH
Q psy12972 408 ENPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQEL 481 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 481 (1578)
.+.||.|++|+||+|+.. ++..||||+.+....... .-
T Consensus 40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~ 83 (302)
T cd05055 40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSE------------------------------------RE 83 (302)
T ss_pred cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHH------------------------------------HH
Confidence 368999999999999742 456899998764322100 01
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 482 DFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 482 Df~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
++.+|.+.+.++. .+..-+.+...+ ......+|+|||+.|.+|.++..... ..++...+.....++. +..+|.
T Consensus 84 ~~~~E~~~l~~l~---~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~ 159 (302)
T cd05055 84 ALMSELKIMSHLG---NHENIVNLLGAC-TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLAS 159 (302)
T ss_pred HHHHHHHHHHhcc---CCCCcceEEEEE-ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3456666666652 122223333332 22345789999999999987643211 1256666666555554 678999
Q ss_pred cCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 559 TGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
.|++|+|++|.|||++ .++++|||....+
T Consensus 160 ~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~ 191 (302)
T cd05055 160 KNCIHRDLAARNVLLTHGKIVKICDFGLARDI 191 (302)
T ss_pred CCeehhhhccceEEEcCCCeEEECCCcccccc
Confidence 9999999999999975 4788999976433
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.3e-07 Score=108.09 Aligned_cols=139 Identities=18% Similarity=0.212 Sum_probs=91.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||+|++|+||+|+.. +|+.||||+.+...... ....++..|+
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~-----------------------------------~~~~~~~~e~ 49 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKE-----------------------------------GFPITAIREI 49 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecccccc-----------------------------------cchHHHHHHH
Confidence 56899999999999966 68999999987543100 0012345566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +..-+.+..++.+- ....+|||||++| ++.++..-....++...+...+.++. +..+|..|++|+
T Consensus 50 ~~l~~l~----~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~ 124 (287)
T cd07840 50 KLLQKLR----HPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHR 124 (287)
T ss_pred HHHHhcc----CCCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence 6665553 22223333343322 2567899999986 55554321223566666555555544 678999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|++|.||++. .+++.|||....+
T Consensus 125 dl~p~nil~~~~~~~~l~d~g~~~~~ 150 (287)
T cd07840 125 DIKGSNILINNDGVLKLADFGLARPY 150 (287)
T ss_pred cCcHHHeEEcCCCCEEEccccceeec
Confidence 9999999976 5889999976433
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=98.54 E-value=5e-07 Score=103.71 Aligned_cols=136 Identities=16% Similarity=0.113 Sum_probs=88.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|... +|+.||+|+.+-..... . .-++..|+
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~---~---------------------------------~~~~~~e~ 49 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSS---A---------------------------------VEDSRKEA 49 (255)
T ss_pred EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchH---H---------------------------------HHHHHHHH
Confidence 67999999999999865 79999999874211100 0 01223444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH-hhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL-LEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l-~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..+.++ .+..-+.+...+ +.....+++|||++|.++.+.... ....++...+...+.++. +..+|..|++|+
T Consensus 50 ~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~ 124 (255)
T cd08219 50 VLLAKM----KHPNIVAFKESF-EADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHR 124 (255)
T ss_pred HHHHhC----CCCCcceEEEEE-EECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccC
Confidence 444433 232223333333 233456899999999988775432 122355555555555544 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.||++. .++++|||...
T Consensus 125 dl~p~nili~~~~~~~l~dfg~~~ 148 (255)
T cd08219 125 DIKSKNIFLTQNGKVKLGDFGSAR 148 (255)
T ss_pred CCCcceEEECCCCcEEEcccCcce
Confidence 9999999975 48899999764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=98.54 E-value=4.4e-07 Score=105.16 Aligned_cols=135 Identities=17% Similarity=0.043 Sum_probs=83.7
Q ss_pred ccccccceEEEEEEecC---CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 410 PIAAASLAQVFRAVTKE---GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~~---G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
-||.|++|+||+|...+ ...||||..+...... .+..|.+|
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~------------------------------------~~~~~~~e 45 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPD------------------------------------EQLLFLQE 45 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChH------------------------------------HHHHHHHH
Confidence 38999999999998654 3578888654322110 11234555
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhc----CCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEK----GFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~----~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
++.+..+ .+..-+.+-... ......+|||||++|.+|.++..-... ..+...+...+.++. +..+|..|
T Consensus 46 ~~~~~~l----~h~nii~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 120 (269)
T cd05042 46 VQPYREL----NHPNVLQCLGQC-IESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD 120 (269)
T ss_pred HHHHHhC----CCCCcceEEEEE-CCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC
Confidence 5544433 222222222222 123456899999999999886432111 112233333333333 67899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|+||.||++. .++++|||...
T Consensus 121 ivH~dlkp~Nill~~~~~~kl~dfg~~~ 148 (269)
T cd05042 121 FIHSDLALRNCQLTADLSVKIGDYGLAL 148 (269)
T ss_pred EecccccHhheEecCCCcEEEecccccc
Confidence 99999999999965 58999999753
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=4.4e-07 Score=106.67 Aligned_cols=142 Identities=14% Similarity=0.042 Sum_probs=93.9
Q ss_pred cccCCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 404 RSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 404 ~~fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
...+...++.|+.+.||+|.. +|+.||||+.+...... ..++ -+|
T Consensus 21 ~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~------------------------~~~~----------~~~ 65 (283)
T PHA02988 21 DKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGH------------------------KVLI----------DIT 65 (283)
T ss_pred CCCCCeEEeeCCceEEEEEEE-CCEEEEEEecccccccc------------------------HHHH----------HHH
Confidence 344456899999999999987 79999999876431110 0000 124
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeC---CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWD---KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~---~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
.+|++.+.+++ +..-+.+-..+.+ -....+|||||++|.+|.++.. ....++.......+.++. +..+|.
T Consensus 66 ~~E~~~l~~l~----h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~-~~~~~~~~~~~~i~~~i~~~l~~lH~ 140 (283)
T PHA02988 66 ENEIKNLRRID----SNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLD-KEKDLSFKTKLDMAIDCCKGLYNLYK 140 (283)
T ss_pred HHHHHHHHhcC----CCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHh-hCCCCChhHHHHHHHHHHHHHHHHHh
Confidence 66777777764 2222222222222 1234579999999999988743 223455555555555544 667887
Q ss_pred -cCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 559 -TGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 559 -~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
.|.+|+|++|.||++. .++++|||...
T Consensus 141 ~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~ 171 (283)
T PHA02988 141 YTNKPYKNLTSVSFLVTENYKLKIICHGLEK 171 (283)
T ss_pred cCCCCCCcCChhhEEECCCCcEEEcccchHh
Confidence 5999999999999965 58999999764
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.6e-07 Score=111.60 Aligned_cols=135 Identities=16% Similarity=0.187 Sum_probs=85.6
Q ss_pred CcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 408 ENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
.++||.|++|.||+|+.. +|+.||||+.+...... .+. .++..|
T Consensus 20 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------~~~------~~~~~e 64 (342)
T cd07879 20 LKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSE-----------------------------IFA------KRAYRE 64 (342)
T ss_pred EEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccc-----------------------------cch------hHHHHH
Confidence 479999999999999964 79999999875321100 000 012334
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeC-----CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWD-----KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~-----~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
.+.+.++. +..-+.+..++.. .....++||||+.+ .+.+ .....++...+...+.+++ +..+|..
T Consensus 65 ~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~---~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 136 (342)
T cd07879 65 LTLLKHMQ----HENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQK---IMGHPLSEDKVQYLVYQMLCGLKYIHSA 136 (342)
T ss_pred HHHHHhcC----CCCccchhheecccccCCCCceEEEEeccccc-CHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 43333332 2222223332221 11345799999964 3332 2334566666666655555 7789999
Q ss_pred CccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 560 GFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 560 G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|+|++|+||++. .++++|||...
T Consensus 137 ~i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 137 GIIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred CcccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 999999999999965 58999999754
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=98.53 E-value=3.4e-07 Score=105.03 Aligned_cols=133 Identities=17% Similarity=0.135 Sum_probs=86.2
Q ss_pred cccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 411 lasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
||+|++|+||+|+.. +|+.||+|+........ .... -.+.+|.+.
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~----------------------------~~~~------~~~~~e~~~ 46 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIR----------------------------KNQV------DQVLTERDI 46 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhh----------------------------hhHH------HHHHHHHHH
Confidence 588999999999986 59999999875432110 0000 112333333
Q ss_pred HHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 490 AERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 490 ~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+++ +.. +++++... ....+++|||++|.+|.++..- ...++...+...+.+++ +..+|..|++|+|
T Consensus 47 l~~~~----h~~---i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~d 118 (265)
T cd05579 47 LSQAQ----SPY---VVKLYYSFQGKKNLYLVMEYLPGGDLASLLEN-VGSLDEDVARIYIAEIVLALEYLHSNGIIHRD 118 (265)
T ss_pred HHhCC----Ccc---hhHHHHheecCcEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCeecCC
Confidence 33332 111 22222222 2345799999999999876432 13456666655555555 6789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 119 i~~~nil~~~~~~~~l~dfg~~~ 141 (265)
T cd05579 119 LKPDNILIDSNGHLKLTDFGLSK 141 (265)
T ss_pred CCHHHeEEcCCCCEEEEecccch
Confidence 999999965 58999999754
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >KOG1989|consensus | Back alignment and domain information |
|---|
Probab=98.53 E-value=2e-07 Score=118.68 Aligned_cols=136 Identities=19% Similarity=0.249 Sum_probs=92.5
Q ss_pred CcccccccceEEEEEEecCC-CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 408 ENPIAAASLAQVFRAVTKEG-VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l~~G-~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
++-||.|+||+||.|....| .++|+|-+.-. .+ .++.. +.+|+|
T Consensus 42 ~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-de---~~L~~---------------------------v~~EI~---- 86 (738)
T KOG1989|consen 42 EKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-DE---EALNA---------------------------VKREID---- 86 (738)
T ss_pred EEEEccCCcEEEEEEEecCCCceeeeeeeecC-CH---HHHHH---------------------------HHHHHH----
Confidence 36899999999999998765 99999976533 11 11111 222333
Q ss_pred HHHHHHHHHhhCCCCCeeecEEee-CC---CCce-----EEEEeccCCCcCCchhh-HhhcCCCHHHHHHHHHHHH--HH
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILW-DK---SSTR-----VLTTEFIDGVKISDKEG-LLEKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~-~~---~t~~-----VLVME~i~G~~l~d~~~-l~~~~~~~~~v~~~l~~~~--l~ 554 (1578)
-|+.+ ++++.|. ..+. .. .+.+ .|-||||.|..|-|+.. ....+++..+|.+++.+++ +.
T Consensus 87 --~MK~L----~gh~nIV--~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa 158 (738)
T KOG1989|consen 87 --IMKLL----SGHKNIV--SYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVA 158 (738)
T ss_pred --HHHHh----cCCCcee--eEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHH
Confidence 33333 3333221 1111 00 1111 48899999999988754 2345688999999888877 77
Q ss_pred HHHHcC--ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 555 QIFQTG--FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 555 ~i~~~G--~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
.||... ++|||||-.|||+. ..+|+|||.+..
T Consensus 159 ~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt 195 (738)
T KOG1989|consen 159 AMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATT 195 (738)
T ss_pred HHhcCCCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence 889888 99999999999965 599999997643
|
|
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.53 E-value=5.8e-07 Score=103.31 Aligned_cols=137 Identities=18% Similarity=0.175 Sum_probs=93.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|.||+|... +++.||+|+........ . -.+..|.
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~---------------------------------~~~~~e~ 51 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDD----F---------------------------------EIIQQEI 51 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhh----H---------------------------------HHHHHHH
Confidence 67999999999999965 68899999986432110 0 0123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++. +..-+.+...+. ....-+|+|||++|..|.++.......++...+...+.+++ +..+|..|++|+|
T Consensus 52 ~~l~~~~----h~~i~~~~~~~~-~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~d 126 (262)
T cd06613 52 SMLKECR----HPNIVAYFGSYL-RRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRD 126 (262)
T ss_pred HHHHhCC----CCChhceEEEEE-eCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecC
Confidence 4444432 222233322221 23445799999999999887543335677777666666555 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|.||++. .+++.|||....+
T Consensus 127 l~p~ni~i~~~~~~~l~d~g~~~~~ 151 (262)
T cd06613 127 IKGANILLTEDGDVKLADFGVSAQL 151 (262)
T ss_pred CChhhEEECCCCCEEECccccchhh
Confidence 999999965 5899999976544
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=98.53 E-value=3.3e-07 Score=108.07 Aligned_cols=137 Identities=18% Similarity=0.138 Sum_probs=88.0
Q ss_pred cccccccceEEEEEEec-----------------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-----------------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVIN 471 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-----------------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~ 471 (1578)
+.||.|++|.||+|..+ ++..||||+.+......
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~----------------------------- 61 (296)
T cd05095 11 EKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKN----------------------------- 61 (296)
T ss_pred eeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHH-----------------------------
Confidence 57999999999998532 34579999886542211
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh----------cCCCH
Q psy12972 472 ELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE----------KGFSL 541 (1578)
Q Consensus 472 e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~----------~~~~~ 541 (1578)
..-+|.+|++.+.++. +...+.+-..+ ......+++|||++|.+|.++..... ..++.
T Consensus 62 -------~~~~~~~E~~~l~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 129 (296)
T cd05095 62 -------ARNDFLKEIKIMSRLK----DPNIIRLLAVC-ITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISY 129 (296)
T ss_pred -------HHHHHHHHHHHHHhCC----CCCcceEEEEE-ecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCH
Confidence 0124556666655543 22222222222 12345689999999999987643211 11333
Q ss_pred HHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 542 ADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 542 ~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
..+...+.++. +..+|..|++|+|++|.||++. .++++|||....
T Consensus 130 ~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 179 (296)
T cd05095 130 STLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRN 179 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCccccc
Confidence 44555444444 7889999999999999999975 489999997644
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >KOG0910|consensus | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.4e-08 Score=103.10 Aligned_cols=78 Identities=24% Similarity=0.420 Sum_probs=57.4
Q ss_pred cccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecccCccccccCCccccccccccccC
Q psy12972 752 HWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDLFGTTDGFSGQDSASRNFHNHMYN 831 (1578)
Q Consensus 752 ~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~~~~~~~i~g~~~~~~~~~~i~~~ 831 (1578)
...|+..|.+ ++.|++|+|||+|||+|+.|.|..+++++++++. +.+..++.| ...++..+ +.+.+.
T Consensus 50 ~~~~~~~Vi~--S~~PVlVdF~A~WCgPCk~l~P~l~~~~~~~~g~-~k~~kvdtD--------~~~ela~~--Y~I~av 116 (150)
T KOG0910|consen 50 DSEFDDKVIN--SDVPVLVDFHAEWCGPCKMLGPILEELVSEYAGK-FKLYKVDTD--------EHPELAED--YEISAV 116 (150)
T ss_pred HHHHHHHHHc--cCCCEEEEEecCcCccHhHhhHHHHHHHHhhcCe-EEEEEEccc--------cccchHhh--cceeee
Confidence 3478888864 8999999999999999999999999999999654 233333322 23333332 556667
Q ss_pred ccccccccccc
Q psy12972 832 PFDDVFSEGFN 842 (1578)
Q Consensus 832 Ptiklf~~~~~ 842 (1578)
||+.+|++|-.
T Consensus 117 PtvlvfknGe~ 127 (150)
T KOG0910|consen 117 PTVLVFKNGEK 127 (150)
T ss_pred eEEEEEECCEE
Confidence 99999987753
|
|
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.53 E-value=6.3e-07 Score=104.08 Aligned_cols=135 Identities=18% Similarity=0.129 Sum_probs=87.5
Q ss_pred cccccccceEEEEEEec-CCC--EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGV--EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~--~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
+.||.|++|.||+|+++ +|+ .||+|+........ ..-++..
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~------------------------------------~~~~~~~ 44 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD------------------------------------DHRDFAG 44 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHH------------------------------------HHHHHHH
Confidence 36899999999999975 455 46777665322110 0113456
Q ss_pred HHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------cCCCHHHHHHHHH
Q psy12972 486 EGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------------KGFSLADVDRKLF 549 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------------~~~~~~~v~~~l~ 549 (1578)
|.+.+.++. +++. +.+-.... .....+|||||++|.+|.++..-.. ..++...+...+.
T Consensus 45 E~~~l~~l~----~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 119 (270)
T cd05047 45 ELEVLCKLG----HHPNIINLLGACE-HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 119 (270)
T ss_pred HHHHHHhhc----cCCCeeeEEEEEe-cCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHH
Confidence 666666553 2332 22222222 2344689999999999887642110 1244555555555
Q ss_pred HHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCch
Q psy12972 550 TAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 550 ~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
++. ++.+|..|++|+|++|.||++. .++++|||..
T Consensus 120 ~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~ 159 (270)
T cd05047 120 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 159 (270)
T ss_pred HHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCc
Confidence 554 6889999999999999999975 4889999975
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=98.52 E-value=4.7e-07 Score=107.37 Aligned_cols=146 Identities=21% Similarity=0.186 Sum_probs=93.6
Q ss_pred ChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHH
Q psy12972 398 THSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVP 476 (1578)
Q Consensus 398 ~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 476 (1578)
.+++.|... +-||.|++|.||+|+.. +|+.||+|+........ .
T Consensus 12 ~~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~----------------------------~----- 56 (307)
T cd06607 12 DPEKLFTDL--REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS----------------------------N----- 56 (307)
T ss_pred Ccchhhhhh--eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCc----------------------------H-----
Confidence 345555554 56999999999999975 79999999874221100 0
Q ss_pred HHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HH
Q psy12972 477 LEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 477 l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~ 554 (1578)
...-++.+|...+.++ .+...+.+...+.+ ....+|||||++|. +.+........++...+...+.++. +.
T Consensus 57 -~~~~~~~~Ei~~l~~l----~h~niv~~~~~~~~-~~~~~lv~e~~~g~-l~~~~~~~~~~l~~~~~~~~~~ql~~~L~ 129 (307)
T cd06607 57 -EKWQDIIKEVRFLQQL----RHPNTIEYKGCYLR-EHTAWLVMEYCLGS-ASDILEVHKKPLQEVEIAAICHGALQGLA 129 (307)
T ss_pred -HHHHHHHHHHHHHHhC----CCCCEEEEEEEEEe-CCeEEEEHHhhCCC-HHHHHHHcccCCCHHHHHHHHHHHHHHHH
Confidence 0011234555544443 23333444444432 34568999999874 4343322234566666655554544 68
Q ss_pred HHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
.+|..|++|+|++|+||++. .+++.|||...
T Consensus 130 ~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~ 163 (307)
T cd06607 130 YLHSHERIHRDIKAGNILLTEPGTVKLADFGSAS 163 (307)
T ss_pred HHHHCCceecCCCcccEEECCCCCEEEeecCcce
Confidence 89999999999999999965 58999999753
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=98.52 E-value=4.1e-07 Score=108.09 Aligned_cols=135 Identities=13% Similarity=0.093 Sum_probs=85.2
Q ss_pred CCcccccccceEEEEEEec---CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 407 DENPIAAASLAQVFRAVTK---EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 407 d~~PlasaSiaQVhrA~l~---~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+...||.|++|.||+|+.+ +++.||||+....-. ...+
T Consensus 5 ~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~---------------------------------------~~~~ 45 (317)
T cd07867 5 EGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI---------------------------------------SMSA 45 (317)
T ss_pred eceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC---------------------------------------cHHH
Confidence 3457999999999999975 457899997653210 0012
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHh--------hcCCCHHHHHHHHHHHH--
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLL--------EKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~--------~~~~~~~~v~~~l~~~~-- 552 (1578)
.+|++.+.++ .+...+.+..++.... ..-+|+|||++| .+.+..... ...++...+...+.+++
T Consensus 46 ~~E~~~l~~l----~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a 120 (317)
T cd07867 46 CREIALLREL----KHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDG 120 (317)
T ss_pred HHHHHHHHhC----CCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHH
Confidence 3455555444 2333344545443322 334799999976 443332111 11244444444444544
Q ss_pred HHHHHHcCccccCCCCCCCCC-------CeeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVN-------TWLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv-------~~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.|||+ +.++++|||...
T Consensus 121 L~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 121 IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred HHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 778999999999999999996 258999999764
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.1e-07 Score=106.31 Aligned_cols=137 Identities=20% Similarity=0.165 Sum_probs=94.4
Q ss_pred cccccccceEEEEEEec-----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTK-----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+-||.|++|.||+|+++ .+..|+||+..+..... ..-+|
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~------------------------------------~~~~~ 48 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEE------------------------------------EEEEF 48 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHH------------------------------------HHHHH
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccc------------------------------------cceee
Confidence 45899999999999987 36789999996643221 12245
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|++.+.+++ +..-+.+=.+.. ....-.+||||+++.+|.+...-. ...++...+...+.++. +..+|..|
T Consensus 49 ~~e~~~l~~l~----h~ni~~~~g~~~-~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~ 123 (259)
T PF07714_consen 49 LNEIQILRKLR----HPNIVKLYGFCI-ENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN 123 (259)
T ss_dssp HHHHHHHHTHS----BTTBE-EEEEEE-SSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eeccccccccc----cccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 56666666552 233333333333 334568999999999999875433 34677777777777666 77899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|.||++. .+++.|||....
T Consensus 124 iiH~~l~~~nill~~~~~~Kl~~f~~~~~ 152 (259)
T PF07714_consen 124 IIHGNLSPSNILLDSNGQVKLSDFGLSRP 152 (259)
T ss_dssp EEEST-SGGGEEEETTTEEEEESTTTGEE
T ss_pred ccccccccccccccccccccccccccccc
Confidence 99999999999964 589999997643
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >PRK09430 djlA Dna-J like membrane chaperone protein; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.6e-08 Score=112.54 Aligned_cols=57 Identities=35% Similarity=0.592 Sum_probs=51.2
Q ss_pred ccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC--------hhHHHHHHHHHHHHHHcCC
Q psy12972 635 VSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--------PTAQEKFLQLTEAYNILSD 691 (1578)
Q Consensus 635 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--------~~a~~~f~~i~~Ay~~L~d 691 (1578)
...|+|++|||++++|.++||++||+|+++||||+... +.++++|++|++||++|+.
T Consensus 198 ~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 198 TLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred cHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 34699999999999999999999999999999999632 3588999999999999975
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.3e-07 Score=109.40 Aligned_cols=138 Identities=20% Similarity=0.178 Sum_probs=88.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+...... . .+.++.+|.
T Consensus 13 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~--------------------~---------------~~~~~~~e~ 57 (302)
T cd07864 13 GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKE--------------------G---------------FPITAIREI 57 (302)
T ss_pred eeecccCCEEEEEEEECCCCcEEEEEEEeeccccc--------------------C---------------chHHHHHHH
Confidence 57899999999999976 69999999886542210 0 011234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC---------CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK---------SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQI 556 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~---------~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i 556 (1578)
+.+.+++ +...+.+...+.+. .+.-.|||||++| .+.+...-....++...+...+.+++ +..+
T Consensus 58 ~~~~~l~----h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L 132 (302)
T cd07864 58 KILRQLN----HRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYC 132 (302)
T ss_pred HHHHhCC----CCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 5554442 22222222222111 1245799999988 44333211123466666666666655 6789
Q ss_pred HHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 557 FQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 557 ~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|..|++|+|++|+||++. .+++.|||....
T Consensus 133 H~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~ 165 (302)
T cd07864 133 HKKNFLHRDIKCSNILLNNKGQIKLADFGLARL 165 (302)
T ss_pred HhCCeecCCCCHHHEEECCCCcEEeCccccccc
Confidence 999999999999999965 488999997643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=98.52 E-value=6.5e-07 Score=103.10 Aligned_cols=138 Identities=19% Similarity=0.188 Sum_probs=91.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|+||+|... +|+.||||+........ + .-++..|+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~---------------------------------~~~~~~e~ 50 (267)
T cd06610 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT---S---------------------------------VDELRKEV 50 (267)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch---H---------------------------------HHHHHHHH
Confidence 67999999999999954 78999999874321110 0 01234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh--hcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL--EKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~--~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
..+.++. +...+.+...+ ......+++|||++|.++.+..... ...++...+...+.+++ +..+|..|++|
T Consensus 51 ~~l~~l~----~~~i~~~~~~~-~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h 125 (267)
T cd06610 51 QAMSQCN----HPNVVKYYTSF-VVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIH 125 (267)
T ss_pred HHHHhcC----CCCEEEEEEEE-eeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 5444432 22222222222 2234568999999999998874322 12456555555555554 67889999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+|++|.||+++ .++++|||....+
T Consensus 126 ~~l~p~ni~~~~~~~~~l~df~~~~~~ 152 (267)
T cd06610 126 RDIKAGNILLGEDGSVKIADFGVSASL 152 (267)
T ss_pred CCCCHHhEEEcCCCCEEEcccchHHHh
Confidence 99999999965 5899999976443
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.2e-06 Score=104.42 Aligned_cols=138 Identities=18% Similarity=0.174 Sum_probs=88.1
Q ss_pred cccccccceEEEEEEec--------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK--------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQE 480 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 480 (1578)
+.||.|++|.||+|+.. ++..||+|+.+...... . .
T Consensus 18 ~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~---~---------------------------------~ 61 (314)
T cd05099 18 KPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDK---D---------------------------------L 61 (314)
T ss_pred eeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChH---H---------------------------------H
Confidence 68999999999999742 35679999876432210 0 0
Q ss_pred HhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh---------------hcCCCHHHHH
Q psy12972 481 LDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL---------------EKGFSLADVD 545 (1578)
Q Consensus 481 lDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~---------------~~~~~~~~v~ 545 (1578)
-++..|.+-+.++. .+...+.+...+. .....+|+|||++|.+|.++.... ...++...+.
T Consensus 62 ~~~~~E~~~l~~l~---~h~~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 137 (314)
T cd05099 62 ADLISEMELMKLIG---KHKNIINLLGVCT-QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLV 137 (314)
T ss_pred HHHHHHHHHHHhcc---CCCCeeeEEEEEc-cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHH
Confidence 12344444333331 1222233333332 234467999999999998764321 1224555555
Q ss_pred HHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 546 RKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 546 ~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
..+.++. +..+|..|++|+|++|.|||++ .++++|||....
T Consensus 138 ~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~ 183 (314)
T cd05099 138 SCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARG 183 (314)
T ss_pred HHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEcccccccc
Confidence 5444444 6789999999999999999976 489999997643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=98.52 E-value=4.6e-07 Score=107.65 Aligned_cols=136 Identities=12% Similarity=0.140 Sum_probs=90.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|... +|+.||+|+........ . ..++.+|+
T Consensus 7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~------------------------------~------~~~~~~E~ 50 (308)
T cd06615 7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPA------------------------------I------RNQIIREL 50 (308)
T ss_pred eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHH------------------------------H------HHHHHHHH
Confidence 56899999999999865 78999999875432211 0 11234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~vH~ 564 (1578)
+.+.++ .+...+.+...+.+ .....|||||++|.+|.++... ...++...+...+.+++ +..+|. .|++|+
T Consensus 51 ~~l~~l----~h~~iv~~~~~~~~-~~~~~lv~ey~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~ 124 (308)
T cd06615 51 KVLHEC----NSPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLKK-AGRIPENILGKISIAVLRGLTYLREKHKIMHR 124 (308)
T ss_pred HHHHhC----CCCCCCeEEEEEee-CCEEEEEeeccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEEC
Confidence 555554 23333444444432 3456799999999999887432 23345554444444444 667786 699999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.||++. .++++|||....
T Consensus 125 dl~p~nil~~~~~~~~l~dfg~~~~ 149 (308)
T cd06615 125 DVKPSNILVNSRGEIKLCDFGVSGQ 149 (308)
T ss_pred CCChHHEEEecCCcEEEccCCCccc
Confidence 9999999965 488999997643
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=98.52 E-value=4.5e-07 Score=104.31 Aligned_cols=138 Identities=17% Similarity=0.140 Sum_probs=89.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|.||+|+.. +|+.||||+.+..... ..+ .-.+..|.
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~---------------------------------~~~~~~e~ 50 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND--PKT---------------------------------IKEIADEM 50 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccc--hHH---------------------------------HHHHHHHH
Confidence 68999999999999965 7999999997644221 000 01223444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.+++ +..-+.+-... .......+||||++|.+|.++..- ....+...+...+.+++ +..+|..|++|+|
T Consensus 51 ~~~~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~d 124 (264)
T cd06626 51 KVLELLK----HPNLVKYYGVE-VHREKVYIFMEYCSGGTLEELLEH-GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRD 124 (264)
T ss_pred HHHHhCC----CCChhheeeeE-ecCCEEEEEEecCCCCcHHHHHhh-cCCCChHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 4444442 21111111111 123456799999999999887431 12245555554444444 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|+||++. .+++.|||....+
T Consensus 125 l~~~nil~~~~~~~kl~d~g~~~~~ 149 (264)
T cd06626 125 IKPANIFLDHNGVIKLGDFGCAVKL 149 (264)
T ss_pred CCHHHEEECCCCCEEEccccccccc
Confidence 999999975 4899999976544
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.6e-07 Score=106.14 Aligned_cols=136 Identities=20% Similarity=0.168 Sum_probs=91.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||+|++|.||+|+.. +|+.||||+....... . ..-++.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~---------------------------------~~~~~~~e~ 50 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAE---D---------------------------------EIEDIQQEI 50 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccc---h---------------------------------HHHHHHHHH
Confidence 56899999999999965 7999999987422100 0 001234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.++.+. +...+.+-..+. ......+||||++|.+|.+... ...++...+...+.+++ +..+|..|++|+|
T Consensus 51 ~~l~~l~----h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~d 123 (274)
T cd06609 51 QFLSQCR----SPYITKYYGSFL-KGSKLWIIMEYCGGGSCLDLLK--PGKLDETYIAFILREVLLGLEYLHEEGKIHRD 123 (274)
T ss_pred HHHHHcC----CCCeeeeeEEEE-ECCeEEEEEEeeCCCcHHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 5554443 222222222222 2345679999999999987643 33566666666665555 5678999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|.||++. .++++|||....+
T Consensus 124 l~p~ni~i~~~~~~~l~d~g~~~~~ 148 (274)
T cd06609 124 IKAANILLSEEGDVKLADFGVSGQL 148 (274)
T ss_pred CCHHHEEECCCCCEEEcccccceee
Confidence 999999965 5899999976544
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=98.52 E-value=4.9e-07 Score=106.69 Aligned_cols=137 Identities=16% Similarity=0.101 Sum_probs=88.4
Q ss_pred cccccccceEEEEEEec-CCC--EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGV--EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~--~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
+.||.|++|+||+|+.. +|. .|++|+.+...... ..-+|.+
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~------------------------------------~~~~~~~ 51 (297)
T cd05089 8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASEN------------------------------------DHRDFAG 51 (297)
T ss_pred eeecCCCcceEEEEEecCCCCcceeEEEEccccCCHH------------------------------------HHHHHHH
Confidence 57999999999999976 454 47888664221110 0113566
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------cCCCHHHHHHHHHH
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------------KGFSLADVDRKLFT 550 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------------~~~~~~~v~~~l~~ 550 (1578)
|...+.++.. +...+.+..... .....+++|||++|.+|.++..-.. ..++...+...+.+
T Consensus 52 E~~~l~~l~~---hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 127 (297)
T cd05089 52 ELEVLCKLGH---HPNIINLLGACE-NRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASD 127 (297)
T ss_pred HHHHHHhhcC---CCchhheEEEEc-cCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHH
Confidence 7666666531 112222222221 2244679999999999987642110 12445555555555
Q ss_pred HH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 551 AF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 551 ~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+. ++.+|..|++|+|++|.|||+. .++++|||...
T Consensus 128 i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 167 (297)
T cd05089 128 VATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSR 167 (297)
T ss_pred HHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCc
Confidence 54 7889999999999999999975 58999999753
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >PF00085 Thioredoxin: Thioredoxin; InterPro: IPR013766 Thioredoxins [, , , ] are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.8e-08 Score=97.73 Aligned_cols=77 Identities=31% Similarity=0.488 Sum_probs=57.7
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.+++.+|++.+.. ++++++|.||+|||++|+.+.|.|+++++.+++ ++.+..++.+. +|+..++.+
T Consensus 3 ~lt~~~f~~~i~~--~~~~vvv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~-------- 71 (103)
T PF00085_consen 3 VLTDENFEKFINE--SDKPVVVYFYAPWCPPCKAFKPILEKLAKEYKD-NVKFAKVDCDENKELCKKYGVKS-------- 71 (103)
T ss_dssp EESTTTHHHHHTT--TSSEEEEEEESTTSHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTSHHHHHHTTCSS--------
T ss_pred ECCHHHHHHHHHc--cCCCEEEEEeCCCCCccccccceeccccccccc-ccccchhhhhccchhhhccCCCC--------
Confidence 3566788888854 679999999999999999999999999999996 44444333332 455545444
Q ss_pred cccccCcccccccccc
Q psy12972 826 HNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~~ 841 (1578)
+|++.++..|-
T Consensus 72 -----~Pt~~~~~~g~ 82 (103)
T PF00085_consen 72 -----VPTIIFFKNGK 82 (103)
T ss_dssp -----SSEEEEEETTE
T ss_pred -----CCEEEEEECCc
Confidence 49988888664
|
Thioredoxin serves as a general protein disulphide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of two cysteine thiol groups to a disulphide, accompanied by the transfer of two electrons and two protons. The net result is the covalent interconversion of a disulphide and a dithiol. In the NADPH-dependent protein disulphide reduction, thioredoxin reductase (TR) catalyses the reduction of oxidised thioredoxin (trx) by NADPH using FAD and its redox-active disulphide; reduced thioredoxin then directly reduces the disulphide in the substrate protein []. Thioredoxin is present in prokaryotes and eukaryotes and the sequence around the redox-active disulphide bond is well conserved. All thioredoxins contain a cis-proline located in a loop preceding beta-strand 4, which makes contact with the active site cysteines, and is important for stability and function []. Thioredoxin belongs to a structural family that includes glutaredoxin, glutathione peroxidase, bacterial protein disulphide isomerase DsbA, and the N-terminal domain of glutathione transferase []. Thioredoxins have a beta-alpha unit preceding the motif common to all these proteins. A number of eukaryotic proteins contain domains evolutionary related to thioredoxin, most of them are protein disulphide isomerases (PDI). PDI (5.3.4.1 from EC) [, , ] is an endoplasmic reticulum multi-functional enzyme that catalyses the formation and rearrangement of disulphide bonds during protein folding []. All PDI contains two or three (ERp72) copies of the thioredoxin domain, each of which contributes to disulphide isomerase activity, but which are functionally non-equivalent []. Moreover, PDI exhibits chaperone-like activity towards proteins that contain no disulphide bonds, i.e. behaving independently of its disulphide isomerase activity []. The various forms of PDI which are currently known are: PDI major isozyme; a multifunctional protein that also function as the beta subunit of prolyl 4-hydroxylase (1.14.11.2 from EC), as a component of oligosaccharyl transferase (2.4.1.119 from EC), as thyroxine deiodinase (3.8.1.4 from EC), as glutathione-insulin transhydrogenase (1.8.4.2 from EC) and as a thyroid hormone-binding protein ERp60 (ER-60; 58 Kd microsomal protein). ERp60 was originally thought to be a phosphoinositide-specific phospholipase C isozyme and later to be a protease. ERp72. ERp5. Bacterial proteins that act as thiol:disulphide interchange proteins that allows disulphide bond formation in some periplasmic proteins also contain a thioredoxin domain. These proteins include: Escherichia coli DsbA (or PrfA) and its orthologs in Vibrio cholerae (TtcpG) and Haemophilus influenzae (Por). E. coli DsbC (or XpRA) and its orthologues in Erwinia chrysanthemi and H. influenzae. E. coli DsbD (or DipZ) and its H. influenzae orthologue. E. coli DsbE (or CcmG) and orthologues in H. influenzae. Rhodobacter capsulatus (Rhodopseudomonas capsulata) (HelX), Rhiziobiacae (CycY and TlpA). This entry represents the thioredoxin domain.; GO: 0045454 cell redox homeostasis; PDB: 3ED3_B 1EP7_A 1EP8_B 1TOF_A 2OE3_B 2OE1_B 2OE0_B 1V98_A 3H79_A 3CXG_A .... |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=98.52 E-value=4.3e-07 Score=105.87 Aligned_cols=137 Identities=12% Similarity=0.072 Sum_probs=86.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+........ .+.++..|.
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~~e~ 50 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ------------------------------------EQKRLLMDL 50 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH------------------------------------HHHHHHHHH
Confidence 56899999999999975 79999999876543211 011122222
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhh-H--hhcCCCHHHHHHHHHHHH--HHHHHHc-Cc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEG-L--LEKGFSLADVDRKLFTAF--AEQIFQT-GF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~-l--~~~~~~~~~v~~~l~~~~--l~~i~~~-G~ 561 (1578)
..+.+ ...+...+.+...+. -.....|+|||++| .+.++.. . ....++...+...+.++. +..+|.. |+
T Consensus 51 ~~~~~---~~~~~~iv~~~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i 125 (283)
T cd06617 51 DISMR---SVDCPYTVTFYGALF-REGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSV 125 (283)
T ss_pred HHHHH---HcCCCCeeeeeEEEe-cCCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Confidence 22222 122222233444332 23457899999986 4444321 1 112456666666666655 6788887 99
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|++|+||++. .++++|||....
T Consensus 126 ~h~dlkp~nil~~~~~~~kl~dfg~~~~ 153 (283)
T cd06617 126 IHRDVKPSNVLINRNGQVKLCDFGISGY 153 (283)
T ss_pred ecCCCCHHHEEECCCCCEEEeecccccc
Confidence 9999999999975 589999997654
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >PHA02624 large T antigen; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=5.9e-08 Score=120.27 Aligned_cols=64 Identities=33% Similarity=0.520 Sum_probs=58.5
Q ss_pred ccccCCCcccccccccC--CHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhcc
Q psy12972 633 CAVSLDPYETLGVPRTA--SLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYD 699 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD 699 (1578)
.....++|++|||+++| +.++||+|||+++++||||++++ .++|++|++||++|+|+.+|..|+
T Consensus 7 ree~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd---eekfk~Ln~AYevL~d~~k~~r~~ 72 (647)
T PHA02624 7 REESKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD---EEKMKRLNSLYKKLQEGVKSARQS 72 (647)
T ss_pred hHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc---HHHHHHHHHHHHHHhcHHHhhhcc
Confidence 44567899999999999 99999999999999999999754 689999999999999999999993
|
|
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=98.51 E-value=5e-07 Score=105.92 Aligned_cols=136 Identities=17% Similarity=0.081 Sum_probs=88.8
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
..||.|++|+||+|... ++..||||+.+.+.... .+-+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~ 54 (288)
T cd05050 11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD------------------------------------MQAD 54 (288)
T ss_pred ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHH------------------------------------HHHH
Confidence 57899999999999863 57899999876432211 0112
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------------cCCCH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------------------KGFSL 541 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------------------~~~~~ 541 (1578)
|.+|+..+.++. +...+.+...+. ......++|||++|.+|.+...... ..++.
T Consensus 55 ~~~ei~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (288)
T cd05050 55 FQREAALMAEFD----HPNIVKLLGVCA-VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSC 129 (288)
T ss_pred HHHHHHHHHhcC----CCchheEEEEEc-CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCH
Confidence 445555555442 222233333332 2235689999999998877643110 12344
Q ss_pred HHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 542 ADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 542 ~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
..+...+.+++ +..+|..|++|+|++|.||++. .++++|||...
T Consensus 130 ~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 178 (288)
T cd05050 130 TEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR 178 (288)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccce
Confidence 44455555544 6789999999999999999965 48899999764
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=98.51 E-value=4.2e-07 Score=106.42 Aligned_cols=136 Identities=14% Similarity=0.120 Sum_probs=86.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|... +|+.||+|+......... . -++.+|.
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~------------------------------~------~~~~~E~ 54 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSV------------------------------R------KQILREL 54 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchH------------------------------H------HHHHHHH
Confidence 56899999999999965 799999999764321110 0 1234444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~vH~ 564 (1578)
+.+..+ .+..-+.+-... ......+|||||++|.++.++.. ....++...+...+.++. +..+|. +|++|+
T Consensus 55 ~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~ 128 (284)
T cd06620 55 QIMHEC----RSPYIVSFYGAF-LNENNICMCMEFMDCGSLDRIYK-KGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHR 128 (284)
T ss_pred HHHHHc----CCCCcceEeeeE-ecCCEEEEEEecCCCCCHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHHhcCeecc
Confidence 444443 222222222222 22356789999999999987632 122345444444444433 556775 799999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.||++. .++++|||....
T Consensus 129 dl~p~nil~~~~~~~~l~d~gl~~~ 153 (284)
T cd06620 129 DIKPSNILVNSRGQIKLCDFGVSGE 153 (284)
T ss_pred CCCHHHEEECCCCcEEEccCCcccc
Confidence 9999999965 489999997643
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=98.51 E-value=4.6e-07 Score=104.34 Aligned_cols=136 Identities=15% Similarity=0.092 Sum_probs=84.6
Q ss_pred ccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 410 PIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
.||.|++|+||+|... ++..||||......... ..-.+.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~~~~ 45 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLE------------------------------------EVEQFLK 45 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHH------------------------------------HHHHHHH
Confidence 5899999999999864 24679999753211000 0012233
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
|...+..+ .+..-+.+-.......+..+++|||..|.++.+...-.....+...+...+.++. +..+|..|++|
T Consensus 46 e~~~l~~l----~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 121 (262)
T cd05058 46 EGIIMKDF----SHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVH 121 (262)
T ss_pred HHHHHccC----CCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 43333322 2222233333332233456899999999999887432222344455544444444 67889999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|.|||+. .+++.|||...
T Consensus 122 ~dlk~~nili~~~~~~kl~dfg~~~ 146 (262)
T cd05058 122 RDLAARNCMLDESFTVKVADFGLAR 146 (262)
T ss_pred cccCcceEEEcCCCcEEECCccccc
Confidence 99999999965 58899999764
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >KOG0193|consensus | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.1e-07 Score=113.50 Aligned_cols=131 Identities=18% Similarity=0.195 Sum_probs=91.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
++||+||+|.||||+.+ | +||||+..-.--. +.-+ --|++|..
T Consensus 398 ~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~pt-------------------------~~ql----------qaFKnEVa 440 (678)
T KOG0193|consen 398 ERIGSGSFGTVYRGRWH-G-DVAVKLLNVDDPT-------------------------PEQL----------QAFKNEVA 440 (678)
T ss_pred ceeccccccceeecccc-c-ceEEEEEecCCCC-------------------------HHHH----------HHHHHHHH
Confidence 68999999999999876 3 7999998522110 0000 12788999
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCc--eEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSST--RVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~--~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
|++.-|+.- .+ .+..++++ ..+|+.|++|-+|.......+..++...+..+.-++. +..+|..+++|+
T Consensus 441 ~lkkTRH~N----Il----LFMG~~~~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHr 512 (678)
T KOG0193|consen 441 VLKKTRHEN----IL----LFMGACMNPPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHR 512 (678)
T ss_pred HHhhcchhh----he----eeehhhcCCceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhh
Confidence 998887531 11 12333332 2589999999999987665555666554444443333 677999999999
Q ss_pred CCCCCCCCC---CeeEEecCCch
Q psy12972 565 DPHSGNDVN---TWLYPVDLGDK 584 (1578)
Q Consensus 565 DpHPGNilv---~~v~liDfG~~ 584 (1578)
|++.-||++ +.|++-|||+.
T Consensus 513 DLKSnNIFl~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 513 DLKSNNIFLHEDLKVKIGDFGLA 535 (678)
T ss_pred hccccceEEccCCcEEEecccce
Confidence 999999994 46999999964
|
|
| >cd02995 PDI_a_PDI_a'_C PDIa family, C-terminal TRX domain (a') subfamily; composed of the C-terminal redox active a' domains of PDI, ERp72, ERp57 (or ERp60) and EFP1 | Back alignment and domain information |
|---|
Probab=98.51 E-value=3.6e-08 Score=97.34 Aligned_cols=78 Identities=21% Similarity=0.274 Sum_probs=54.3
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Cc--ceeeeeecccCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GV--GFFTVHYDLFGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~v--g~v~~~~~~~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|++.+.. ++++++|.||||||++|+.+.|.|+++++.+++. .+ +.++|..+..+....
T Consensus 4 ~l~~~~f~~~i~~--~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~----------- 70 (104)
T cd02995 4 VVVGKNFDEVVLD--SDKDVLVEFYAPWCGHCKALAPIYEELAEKLKGDDNVVIAKMDATANDVPSEFV----------- 70 (104)
T ss_pred EEchhhhHHHHhC--CCCcEEEEEECCCCHHHHHHhhHHHHHHHHhcCCCCEEEEEEeCcchhhhhhcc-----------
Confidence 4556678777744 3578999999999999999999999999999873 34 334443222222222
Q ss_pred cccccCcccccccccc
Q psy12972 826 HNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~~ 841 (1578)
+..+|++.+|..+-
T Consensus 71 --~~~~Pt~~~~~~~~ 84 (104)
T cd02995 71 --VDGFPTILFFPAGD 84 (104)
T ss_pred --CCCCCEEEEEcCCC
Confidence 24459988887654
|
PDI, ERp72 and ERp57 are endoplasmic reticulum (ER)-resident eukaryotic proteins involved in oxidative protein folding. They are oxidases, catalyzing the formation of disulfide bonds of newly synthesized polypeptides in the ER. They also exhibit reductase activity in acting as isomerases to correct any non-native disulfide bonds, as well as chaperone activity to prevent protein aggregation and facilitate the folding of newly synthesized proteins. PDI and ERp57 have the abb'a' domain structure (where a and a' are redox active TRX domains while b and b' are redox inactive TRX-like domains). PDI also contains an acidic region (c domain) after the a' domain that is absent in ERp57. ERp72 has an additional a domain at the N-terminus (a"abb'a' domain structure). ERp57 interacts with the lectin chaperones, calnexin and calreticu |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=98.51 E-value=5.6e-07 Score=103.34 Aligned_cols=141 Identities=16% Similarity=0.129 Sum_probs=88.5
Q ss_pred cccc-cccceEEEEEEecCCCEEEEEEec-chhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIA-AASLAQVFRAVTKEGVEVAVKVQY-IDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~Pla-saSiaQVhrA~l~~G~~VAVKVq~-P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
..|| +|+.|.||+... +|+.+|||.-. +++-..+..+ .+.+ .....-.+.+|
T Consensus 37 ~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~----------------~~~~---------~~~~~~r~~rE 90 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKD----------------RYLF---------TGLERTRAFAE 90 (239)
T ss_pred ceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhh----------------cccc---------cchhhhHHHHH
Confidence 4676 888888998876 47889999764 3332111111 0000 00112235678
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCC------CCceEEEEeccCC-CcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDK------SSTRVLTTEFIDG-VKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQT 559 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~------~t~~VLVME~i~G-~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~ 559 (1578)
++.+.++.+ ..+.+|+++... ..+.+|||||++| .++.++. ....++. +....+.+ .+..+|..
T Consensus 91 ~~ll~~L~~-----~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l--~~~~l~~-~~~~~i~~-~l~~lH~~ 161 (239)
T PRK01723 91 FRLLAQLYE-----AGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALL--QEAPLSE-EQWQAIGQ-LIARFHDA 161 (239)
T ss_pred HHHHHHHHh-----CCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHH--hcCCCCH-HHHHHHHH-HHHHHHHC
Confidence 888888864 346677776421 1133699999998 5676652 2333343 33344443 47899999
Q ss_pred CccccCCCCCCCCCC---eeEEecCCch
Q psy12972 560 GFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 560 G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
|++|+|+||+|||+. .+++||||..
T Consensus 162 GI~HrDlkp~NILv~~~~~v~LIDfg~~ 189 (239)
T PRK01723 162 GVYHADLNAHNILLDPDGKFWLIDFDRG 189 (239)
T ss_pred CCCCCCCCchhEEEcCCCCEEEEECCCc
Confidence 999999999999974 4888888854
|
|
| >PF13848 Thioredoxin_6: Thioredoxin-like domain; PDB: 3EC3_B 3BOA_A 2B5E_A 1BJX_A 2K18_A 3UEM_A 3BJ5_A 2BJX_A 2R2J_A 2L4C_A | Back alignment and domain information |
|---|
Probab=98.51 E-value=3.4e-06 Score=92.32 Aligned_cols=169 Identities=17% Similarity=0.254 Sum_probs=119.9
Q ss_pred cccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCc-cccccCCC-CCHHHHHHHHHhhCCCccc
Q psy12972 890 QVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGR-TSFFKEPS-FSVQKMVEFFRLKLPYKLI 967 (1578)
Q Consensus 890 ~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~-~~~y~~G~-~s~~~L~~fi~~~lp~~vv 967 (1578)
.....|.++|+.+.+. +.|+.+. +.++|+++++.. |++++|+++. ....|.|. .+.++|.+||....-| .+
T Consensus 7 ~~~~~f~~~A~~~~~~-~~F~~~~---~~~~~~~~~~~~--p~i~~~k~~~~~~~~y~~~~~~~~~l~~fI~~~~~P-~v 79 (184)
T PF13848_consen 7 ELFEIFEEAAEKLKGD-YQFGVTF---NEELAKKYGIKE--PTIVVYKKFDEKPVVYDGDKFTPEELKKFIKKNSFP-LV 79 (184)
T ss_dssp HHHHHHHHHHHHHTTT-SEEEEEE----HHHHHHCTCSS--SEEEEEECTTTSEEEESSSTTSHHHHHHHHHHHSST-SC
T ss_pred HHHHHHHHHHHhCcCC-cEEEEEc---HHHHHHHhCCCC--CcEEEeccCCCCceecccccCCHHHHHHHHHHhccc-cc
Confidence 3456899999999976 8999765 678999999974 9999998843 23344476 8999999999876533 37
Q ss_pred cccccccHHHHhhcccCCCcEEEEEeccCCchHHHHH-----HHHhhcCCCeEEEEEEcccCCChhHHhhcCCC-CCCcE
Q psy12972 968 VPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYL-----INAFKHRTTIVFGVIVYDQEDSSSVFQRFKVP-GDKDS 1041 (1578)
Q Consensus 968 ~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~-----~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~-~~~Pt 1041 (1578)
..+|.+++..+.... ..+++++|..+........ ..|.++++++.|++++.+ ..+.+++.+++. ...|+
T Consensus 80 ~~~t~~n~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~f~~~d~~--~~~~~~~~~~i~~~~~P~ 154 (184)
T PF13848_consen 80 PELTPENFEKLFSSP---KPPVLILFDNKDNESTEAFKKELQDIAKKFKGKINFVYVDAD--DFPRLLKYFGIDEDDLPA 154 (184)
T ss_dssp EEESTTHHHHHHSTS---SEEEEEEEETTTHHHHHHHHHHHHHHHHCTTTTSEEEEEETT--TTHHHHHHTTTTTSSSSE
T ss_pred cccchhhHHHHhcCC---CceEEEEEEcCCchhHHHHHHHHHHHHHhcCCeEEEEEeehH--HhHHHHHHcCCCCccCCE
Confidence 888999999998773 3446666654433322222 234467888999999665 667899999998 46799
Q ss_pred EEEeccCCCCCccccccCCCCchhhhhhhh
Q psy12972 1042 LLIFKEDKDRPSASITMNSIPVPTLQDITD 1071 (1578)
Q Consensus 1042 llvfk~~~~~~~~~l~~~~l~~~~L~~fI~ 1071 (1578)
+++++..... ..+...+.++...|..|++
T Consensus 155 ~vi~~~~~~~-~~~~~~~~~~~~~i~~Fl~ 183 (184)
T PF13848_consen 155 LVIFDSNKGK-YYYLPEGEITPESIEKFLN 183 (184)
T ss_dssp EEEEETTTSE-EEE--SSCGCHHHHHHHHH
T ss_pred EEEEECCCCc-EEcCCCCCCCHHHHHHHhc
Confidence 9999644332 2222356677788888875
|
... |
| >TIGR00412 redox_disulf_2 small redox-active disulfide protein 2 | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.8e-07 Score=87.72 Aligned_cols=72 Identities=26% Similarity=0.331 Sum_probs=58.0
Q ss_pred EEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCC-CCHHHHHH
Q psy12972 878 ILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPS-FSVQKMVE 956 (1578)
Q Consensus 878 V~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~-~s~~~L~~ 956 (1578)
|.||++||++|+.+.|.++++++++... +.+.+|| +.+.+.++|+.+ .||+++ +|+.. ..|. .+.+.|.+
T Consensus 3 i~~~a~~C~~C~~~~~~~~~~~~e~~~~-~~~~~v~---~~~~a~~~~v~~-vPti~i--~G~~~--~~G~~~~~~~l~~ 73 (76)
T TIGR00412 3 IQIYGTGCANCQMTEKNVKKAVEELGID-AEFEKVT---DMNEILEAGVTA-TPGVAV--DGELV--IMGKIPSKEEIKE 73 (76)
T ss_pred EEEECCCCcCHHHHHHHHHHHHHHcCCC-eEEEEeC---CHHHHHHcCCCc-CCEEEE--CCEEE--EEeccCCHHHHHH
Confidence 7899999999999999999999998654 8888887 345588999998 999998 88766 3364 34467776
Q ss_pred HH
Q psy12972 957 FF 958 (1578)
Q Consensus 957 fi 958 (1578)
++
T Consensus 74 ~l 75 (76)
T TIGR00412 74 IL 75 (76)
T ss_pred Hh
Confidence 65
|
This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin. |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.50 E-value=6.2e-07 Score=103.15 Aligned_cols=134 Identities=18% Similarity=0.133 Sum_probs=90.4
Q ss_pred ccccccceEEEEEEec--C--CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 410 PIAAASLAQVFRAVTK--E--GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~--~--G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
-||.|++|+||+|+.. + +..||+|+.+..... ..+-++..
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~------------------------------------~~~~~~~~ 45 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA------------------------------------AGKKEFLR 45 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccch------------------------------------HHHHHHHH
Confidence 3799999999999853 3 378999987644221 01123445
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
|.+.+.++ .+..-+.+...+ .....+++|||++|.+|.+... ....++...+...+.+++ +..+|..|++|
T Consensus 46 e~~~l~~l----~h~~iv~~~~~~--~~~~~~~v~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H 118 (257)
T cd05060 46 EASVMAQL----DHPCIVRLIGVC--KGEPLMLVMELAPLGPLLKYLK-KRREIPVSDLKELAHQVAMGMAYLESKHFVH 118 (257)
T ss_pred HHHHHHhc----CCCCeeeEEEEE--cCCceEEEEEeCCCCcHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHhhcCeec
Confidence 55555444 232334443333 2345689999999999987643 122466666666666655 67889999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchhh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|++|.|||+. .++++|||....
T Consensus 119 ~di~p~nili~~~~~~kl~df~~~~~ 144 (257)
T cd05060 119 RDLAARNVLLVNRHQAKISDFGMSRA 144 (257)
T ss_pred cCcccceEEEcCCCcEEeccccccce
Confidence 99999999965 489999997643
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=98.50 E-value=3.9e-07 Score=107.01 Aligned_cols=139 Identities=17% Similarity=0.193 Sum_probs=86.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-||.|++|.||+|+.. +|+.||||+.+...... + ..-++.+|.
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~---~--------------------------------~~~~~~~E~ 51 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEE---G--------------------------------IPPTALREI 51 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEeehhhcccc---C--------------------------------CchHHHHHH
Confidence 46899999999999965 79999999875322110 0 001234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC----ceEEEEeccCCCcCCchhhHhh----cCCCHHHHHHHHHHHH--HHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS----TRVLTTEFIDGVKISDKEGLLE----KGFSLADVDRKLFTAF--AEQIF 557 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t----~~VLVME~i~G~~l~d~~~l~~----~~~~~~~v~~~l~~~~--l~~i~ 557 (1578)
..+.++.+ +...+.+..+...... .-++||||++| .+.+...... ..++...+...+.+++ +..+|
T Consensus 52 ~~l~~l~~---~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH 127 (295)
T cd07837 52 SLLQMLSE---SIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH 127 (295)
T ss_pred HHHHHccC---CCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 55554432 1122233333221111 14799999998 5655432111 2356666666555555 78899
Q ss_pred HcCccccCCCCCCCCCC----eeEEecCCchhh
Q psy12972 558 QTGFVHADPHSGNDVNT----WLYPVDLGDKFR 586 (1578)
Q Consensus 558 ~~G~vH~DpHPGNilv~----~v~liDfG~~~~ 586 (1578)
..|++|+|++|.||+++ .+++.|||....
T Consensus 128 ~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 128 KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred HCCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 99999999999999965 378899997643
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=98.50 E-value=2.2e-07 Score=108.45 Aligned_cols=136 Identities=18% Similarity=0.119 Sum_probs=85.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||+|+.+...... . .+.++..|.
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~--------------------~---------------~~~~~~~ei 50 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE--------------------G---------------VPSSALREI 50 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeecccccc--------------------c---------------CccchhHHH
Confidence 56899999999999975 79999999875321110 0 001123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.+++ +...+.+-..+. -....+++|||++| ++.+........++...+...+.+++ +..+|..|++|+|
T Consensus 51 ~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~d 124 (284)
T cd07839 51 CLLKELK----HKNIVRLYDVLH-SDKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRD 124 (284)
T ss_pred HHHHhcC----CCCeeeHHHHhc-cCCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence 4444432 111111111211 23456799999986 45443221233466666666665555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+||++. .+++.|||...
T Consensus 125 l~~~nil~~~~~~~~l~dfg~~~ 147 (284)
T cd07839 125 LKPQNLLINKNGELKLADFGLAR 147 (284)
T ss_pred CCHHHEEEcCCCcEEECccchhh
Confidence 999999965 58999999764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >KOG0612|consensus | Back alignment and domain information |
|---|
Probab=98.50 E-value=2.1e-07 Score=119.81 Aligned_cols=136 Identities=16% Similarity=0.223 Sum_probs=85.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhH-HHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERF-VGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~-~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
+-||.|.||-||.-+.+ +++..|.|+.... +.+ +.|-+.++--.+++.. -+-.||+
T Consensus 81 KvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~--eMlKr~~tA~F~EERDimv~----~ns~Wiv---------------- 138 (1317)
T KOG0612|consen 81 KVIGRGAFGEVALVRHKSTEKVYAMKILNKW--EMLKRAETACFREERDIMVF----GNSEWIV---------------- 138 (1317)
T ss_pred HHhcccccceeEEEEeeccccchhHHHhhHH--HHhhchhHHHHHHHhHHHHc----CCcHHHH----------------
Confidence 68999999999999976 6778888876421 011 1222222222222111 1223332
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcC-CCHHHHHH-HHHHHH--HHHHHHcCcc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKG-FSLADVDR-KLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~-~~~~~v~~-~l~~~~--l~~i~~~G~v 562 (1578)
.+.-.|.+...+ +|||||++|+.|-.+.. ..+ ++ ++.++ .+.++. +..||..|+|
T Consensus 139 -----~LhyAFQD~~~L-------------YlVMdY~pGGDlltLlS--k~~~~p-E~~ArFY~aEiVlAldslH~mgyV 197 (1317)
T KOG0612|consen 139 -----QLHYAFQDERYL-------------YLVMDYMPGGDLLTLLS--KFDRLP-EDWARFYTAEIVLALDSLHSMGYV 197 (1317)
T ss_pred -----HHHHHhcCccce-------------EEEEecccCchHHHHHh--hcCCCh-HHHHHHHHHHHHHHHHHHHhccce
Confidence 233345555443 48999999999887743 334 43 44443 333333 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|||+||.|||+. .+++.|||.-.++
T Consensus 198 HRDiKPDNvLld~~GHikLADFGsClkm 225 (1317)
T KOG0612|consen 198 HRDIKPDNVLLDKSGHIKLADFGSCLKM 225 (1317)
T ss_pred eccCCcceeEecccCcEeeccchhHHhc
Confidence 999999999954 6999999965443
|
|
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=98.50 E-value=6.8e-07 Score=105.02 Aligned_cols=137 Identities=18% Similarity=0.125 Sum_probs=90.1
Q ss_pred cccccccceEEEEEEecC-----------------CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKE-----------------GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVIN 471 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~-----------------G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~ 471 (1578)
+.||.|++|.||+|+..+ +..||+|+...+....
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~----------------------------- 61 (296)
T cd05051 11 EKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDN----------------------------- 61 (296)
T ss_pred ccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHH-----------------------------
Confidence 568999999999998642 3568999876543211
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh----------cCCCH
Q psy12972 472 ELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE----------KGFSL 541 (1578)
Q Consensus 472 e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~----------~~~~~ 541 (1578)
..-+|..|++.+.++. +...+.+...+. .....+++|||++|.+|.+...-.. ..++.
T Consensus 62 -------~~~~~~~e~~~l~~l~----~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 129 (296)
T cd05051 62 -------AREDFLKEVKILSRLS----DPNIARLLGVCT-VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSF 129 (296)
T ss_pred -------HHHHHHHHHHHHHhcC----CCCEeEEEEEEe-cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCH
Confidence 0113455555555543 222233333332 2245789999999999887643111 13555
Q ss_pred HHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 542 ADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 542 ~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
..+...+.++. +..+|..|++|+|++|.||+++ .+++.|||....
T Consensus 130 ~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 179 (296)
T cd05051 130 STLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRN 179 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCceEEccccceee
Confidence 66666555555 6789999999999999999975 488899997643
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=98.50 E-value=6.4e-07 Score=103.60 Aligned_cols=138 Identities=14% Similarity=0.181 Sum_probs=87.6
Q ss_pred cccccccceEEEEEEecC----CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTKE----GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~----G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|++.. +..||||+.+...... .+ .-.+.
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~--~~---------------------------------~~~~~ 49 (273)
T cd05035 5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTY--SE---------------------------------IEEFL 49 (273)
T ss_pred cccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCH--HH---------------------------------HHHHH
Confidence 578999999999999752 4789999875432110 00 01234
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCC-----CceEEEEeccCCCcCCchhhHhh-----cCCCHHHHHHHHHHHH--
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKS-----STRVLTTEFIDGVKISDKEGLLE-----KGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~-----t~~VLVME~i~G~~l~d~~~l~~-----~~~~~~~v~~~l~~~~-- 552 (1578)
.|...+.++ .+..-+.+.....+.. ...+++|||++|.++.+...... ..++...+...+.++.
T Consensus 50 ~e~~~l~~l----~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~a 125 (273)
T cd05035 50 SEAACMKDF----DHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALG 125 (273)
T ss_pred HHHHHHHhC----CCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHH
Confidence 454444433 2222222222222111 12589999999999887643221 2355555555555555
Q ss_pred HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.||++. .++++|||...
T Consensus 126 L~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 161 (273)
T cd05035 126 MEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSK 161 (273)
T ss_pred HHHHHhCCeeccccchheEEECCCCeEEECCcccee
Confidence 7889999999999999999965 58999999754
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=98.49 E-value=6.9e-07 Score=106.17 Aligned_cols=148 Identities=18% Similarity=0.182 Sum_probs=95.5
Q ss_pred CCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHH
Q psy12972 396 GCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELK 474 (1578)
Q Consensus 396 G~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~ 474 (1578)
...++..|... +.||.|++|+||+|+.. +|+.||||.....-... + .
T Consensus 10 ~~~~~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~---~---------------------~------ 57 (308)
T cd06634 10 KDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS---N---------------------E------ 57 (308)
T ss_pred cCCcHHHHHHH--HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccC---h---------------------H------
Confidence 34455566654 67999999999999965 78999999775321100 0 0
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--
Q psy12972 475 VPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 475 ~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~-- 552 (1578)
..-++..|++.++++. +...+.+...+. -....+|||||+.| ++.+........++...+...+.+++
T Consensus 58 ----~~~~~~~e~~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~~l~~~ 127 (308)
T cd06634 58 ----KWQDIIKEVRFLQKLR----HPNTIQYRGCYL-REHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQG 127 (308)
T ss_pred ----HHHHHHHHHHHHHhCC----CCCcccEEEEEE-cCCeeEEEEEccCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 0112344555555543 222233333332 23456899999986 56554333334466666666655554
Q ss_pred HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.||++. .+++.|||...
T Consensus 128 l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 163 (308)
T cd06634 128 LAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSAS 163 (308)
T ss_pred HHHHHhCCcccCCCCHHhEEECCCCcEEECCcccce
Confidence 6889999999999999999965 48999999754
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=98.49 E-value=5.3e-07 Score=106.60 Aligned_cols=135 Identities=18% Similarity=0.174 Sum_probs=90.1
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||...-..... .-.+.+|.
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~-------------------------------------~~~~~~e~ 67 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPK-------------------------------------KELIINEI 67 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCch-------------------------------------HHHHHHHH
Confidence 5799999999999985 589999999763210000 00123444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+..+ .+...+.+-..+. .....++||||++|.++.+.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 68 ~~l~~l----~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~--~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~d 140 (296)
T cd06655 68 LVMKEL----KNPNIVNFLDSFL-VGDELFVVMEYLAGGSLTDVV--TETCMDEAQIAAVCRECLQALEFLHANQVIHRD 140 (296)
T ss_pred HHHHhc----CCCceeeeeeeEe-cCceEEEEEEecCCCcHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 444433 2222222222221 234568999999999998763 344567777666655554 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|.||+++ .++++|||....+
T Consensus 141 L~p~Nili~~~~~~kl~dfg~~~~~ 165 (296)
T cd06655 141 IKSDNVLLGMDGSVKLTDFGFCAQI 165 (296)
T ss_pred CCHHHEEECCCCCEEEccCccchhc
Confidence 999999975 5899999976443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=98.49 E-value=6e-07 Score=105.36 Aligned_cols=139 Identities=16% Similarity=0.123 Sum_probs=92.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|+.|.||+|... +++.||+|+..+.... ..+-++.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------------------------------------~~~~~~~~e~ 50 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP------------------------------------DLQKQILREL 50 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCch------------------------------------HHHHHHHHHH
Confidence 67999999999999975 6899999987543211 0112345566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhH-h--hcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGL-L--EKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l-~--~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+.+.++. +..-+.+...+.+. ....+|||||++|.+|.++... . ...++...+...+.+++ +..+|..|+
T Consensus 51 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i 126 (287)
T cd06621 51 EINKSCK----SPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKI 126 (287)
T ss_pred HHHHhCC----CCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 6665543 22223333333222 2345799999999999875331 1 12345555555555544 678899999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+|+|++|.||++. .++++|||....+
T Consensus 127 ~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 127 IHRDIKPSNILLTRKGQVKLCDFGVSGEL 155 (287)
T ss_pred ccCCCCHHHEEEecCCeEEEeeccccccc
Confidence 9999999999965 5899999976443
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=98.49 E-value=6.1e-07 Score=103.74 Aligned_cols=134 Identities=19% Similarity=0.142 Sum_probs=89.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|... +|+.||+|+...+-.. .-++.+|.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~--------------------------------------~~~~~~e~ 53 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--------------------------------------VEEFLKEA 53 (263)
T ss_pred eecCCcccceEEEEEEecCCceEEEEEecCCchH--------------------------------------HHHHHHHH
Confidence 56899999999999965 6899999987532110 01234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++ .+...+.+...+. .....+++|||++|.+|.+..... ...++...+...+.+++ +..+|..|++|+
T Consensus 54 ~~l~~l----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~ 128 (263)
T cd05052 54 AVMKEI----KHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 128 (263)
T ss_pred HHHHhC----CCCChhheEEEEc-CCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeec
Confidence 544443 2222233333332 234567999999999998864321 12355555555455544 678999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.||++. .++++|||...
T Consensus 129 dlkp~nil~~~~~~~kl~df~~~~ 152 (263)
T cd05052 129 DLAARNCLVGENHLVKVADFGLSR 152 (263)
T ss_pred ccCcceEEEcCCCcEEeCCCcccc
Confidence 9999999975 58999999754
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.49 E-value=5.8e-07 Score=106.91 Aligned_cols=136 Identities=16% Similarity=0.117 Sum_probs=90.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+..... + . ..-.+..|.
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~---~-------------------------~------~~~~~~~e~ 52 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIK---R-------------------------N------KVKRVLTEQ 52 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccch---H-------------------------H------HHHHHHHHH
Confidence 57999999999999976 59999999886532110 0 0 001234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+.+.++. + + .+++++.. .....+|+|||++|.+|.++.... ...++...+...+.+++ +..+|..|++
T Consensus 53 ~~l~~l~----~-~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~ 125 (316)
T cd05574 53 EILATLD----H-P--FLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIV 125 (316)
T ss_pred HHHHhCC----C-C--CchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5555543 2 2 23333332 234568999999999998874321 12355555544444444 6789999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|+||.||++. .+++.|||...
T Consensus 126 H~dlkp~Nili~~~~~~~l~dfg~~~ 151 (316)
T cd05574 126 YRDLKPENILLHESGHIMLSDFDLSK 151 (316)
T ss_pred ccCCChHHeEEcCCCCEEEeecchhh
Confidence 999999999965 58889998653
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=98.49 E-value=6.3e-07 Score=106.16 Aligned_cols=137 Identities=16% Similarity=0.132 Sum_probs=89.5
Q ss_pred cccccccceEEEEEEec-CCC----EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGV----EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~----~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||+|++|+||+|+.. +|+ .||+|+..+..... ....+
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~ 56 (303)
T cd05110 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPK------------------------------------ANVEF 56 (303)
T ss_pred cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHH------------------------------------HHHHH
Confidence 67999999999999854 565 57888775432211 01124
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
.+|+..+.++ .+..-+.+...+. .....++|||++|..+.+........++...+...+.++. +..+|..|+
T Consensus 57 ~~e~~~~~~l----~h~niv~~~~~~~--~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 130 (303)
T cd05110 57 MDEALIMASM----DHPHLVRLLGVCL--SPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRL 130 (303)
T ss_pred HHHHHHHHhC----CCCCcccEEEEEc--CCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCe
Confidence 4555555443 2323344433332 2346799999999888876432222355555555444444 678999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+|+|++|.||++. .++++|||....+
T Consensus 131 vH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 131 VHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred eccccccceeeecCCCceEEccccccccc
Confidence 9999999999974 5899999977543
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >KOG0580|consensus | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.2e-07 Score=104.23 Aligned_cols=162 Identities=17% Similarity=0.108 Sum_probs=94.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH--
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN-- 485 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~-- 485 (1578)
+|+|-|-||+||.|+.+ ++--||+||.... + +.. ......+++|+.-..
T Consensus 28 r~LgkgkFG~vYlarekks~~IvalKVlfKs---q----i~~---------------------~~v~~qlrREiEIqs~L 79 (281)
T KOG0580|consen 28 RPLGKGKFGNVYLAREKKSLFIVALKVLFKS---Q----ILK---------------------TQVEHQLRREIEIQSHL 79 (281)
T ss_pred ccccCCccccEeEeeeccCCcEEEEeeeeHH---H----HHH---------------------hcchhhhhheeEeeccc
Confidence 69999999999999965 7899999998421 1 000 011122222211100
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCch-hhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDK-EGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~-~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
---|+-|+...|-+ ..+-+|++||..+..+-.. ..-....++....+..+.++. +..+|..+++
T Consensus 80 ~hpnilrlY~~fhd-------------~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VI 146 (281)
T KOG0580|consen 80 RHPNILRLYGYFHD-------------SKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVI 146 (281)
T ss_pred CCccHHhhhhheec-------------cceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcc
Confidence 00122222222211 2334599999976665543 211122344443444343333 6678999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCc------hhhhhhhhhcccCCCCCCCCCCccccCcccc
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGD------KFRLVLATTLREDGYPDSGEWNPLEESPRMN 614 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~------~~~l~l~~~~~~~g~~D~G~~~~l~~~~r~~ 614 (1578)
|||++|.|+|.+ .+++.|||- +.|-.++ +..-|++.-|+...+.+..++
T Consensus 147 hRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlc---gt~dyl~pEmv~~~~hd~~Vd 204 (281)
T KOG0580|consen 147 HRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLC---GTLDYLPPEMVEGRGHDKFVD 204 (281)
T ss_pred cCCCCHHHhccCCCCCeeccCCCceeecCCCCceeee---cccccCCHhhcCCCCccchhh
Confidence 999999999966 589999993 3344444 223377888888766555544
|
|
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=5.2e-07 Score=119.48 Aligned_cols=139 Identities=13% Similarity=-0.001 Sum_probs=90.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
..||.|++|.||+|+.. +++.||+|+........ . ..-.|..|+
T Consensus 19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e-----------------------------~------~~~~~~~EI 63 (1021)
T PTZ00266 19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKE-----------------------------R------EKSQLVIEV 63 (1021)
T ss_pred EEEecCCCeEEEEEEECCCCeEEEEEEEeccccCH-----------------------------H------HHHHHHHHH
Confidence 67999999999999965 68899999875321100 0 001234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHh---hcCCCHHHHHHHHHHHH--HHHHHHc--
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLL---EKGFSLADVDRKLFTAF--AEQIFQT-- 559 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~---~~~~~~~~v~~~l~~~~--l~~i~~~-- 559 (1578)
..+.++. +...|.+-..+.+-. ..-+|||||++|.+|.++..-. ...++...+...+.+++ +..+|..
T Consensus 64 ~IL~~L~----HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~ 139 (1021)
T PTZ00266 64 NVMRELK----HKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKD 139 (1021)
T ss_pred HHHHHcC----CCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhccc
Confidence 5555543 333344434332222 2346999999999998864321 13466666666666655 6777874
Q ss_pred -----CccccCCCCCCCCCCe--------------------eEEecCCchhh
Q psy12972 560 -----GFVHADPHSGNDVNTW--------------------LYPVDLGDKFR 586 (1578)
Q Consensus 560 -----G~vH~DpHPGNilv~~--------------------v~liDfG~~~~ 586 (1578)
+++|+|++|.|||+.. ++++|||....
T Consensus 140 ~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~ 191 (1021)
T PTZ00266 140 GPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKN 191 (1021)
T ss_pred ccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccc
Confidence 4999999999999731 78899997643
|
|
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=98.49 E-value=7.1e-07 Score=110.38 Aligned_cols=33 Identities=21% Similarity=0.130 Sum_probs=29.0
Q ss_pred HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.|||+. .++++|||...
T Consensus 252 L~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~ 287 (401)
T cd05107 252 MEFLASKNCVHRDLAARNVLICEGKLVKICDFGLAR 287 (401)
T ss_pred HHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcce
Confidence 6789999999999999999965 48899999764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=98.48 E-value=4.9e-07 Score=104.04 Aligned_cols=136 Identities=15% Similarity=0.102 Sum_probs=89.3
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+++.||+|+....-... .-++..|.+
T Consensus 12 ~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~-------------------------------------~~~~~~e~~ 54 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLK-------------------------------------QQDFQKEVQ 54 (261)
T ss_pred hhhccCCCccEEEeEecCCCcEEEEeccccchhh-------------------------------------HHHHHHHHH
Confidence 5689999999999999889999999875321100 002334444
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++. +...+.+.... .....-.++|||++|.+|.+...-. ...++...+...+.+++ +..+|..|++|+|
T Consensus 55 ~l~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~d 129 (261)
T cd05148 55 ALKRLR----HKHLISLFAVC-SVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRD 129 (261)
T ss_pred HHhcCC----CcchhheeeeE-ecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence 444332 11112222222 2234457999999999998874321 22355555555555544 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||+++ .+++.|||....
T Consensus 130 l~~~nilv~~~~~~kl~d~g~~~~ 153 (261)
T cd05148 130 LAARNILVGEDLVCKVADFGLARL 153 (261)
T ss_pred cCcceEEEcCCceEEEccccchhh
Confidence 999999975 588999997644
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=98.48 E-value=4.4e-07 Score=106.65 Aligned_cols=138 Identities=17% Similarity=0.211 Sum_probs=91.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||..+...... .+ ..++.+|.
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~~------~~~~~~e~ 55 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKE-----------------------------GF------PITSLREI 55 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccc-----------------------------cc------hhhHHHHH
Confidence 67899999999999976 79999999875332110 00 11234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..+.+++ +...+.+...+..- ....+|+|||++| .+.++.......++...+...+.+++ +..+|..|++|+
T Consensus 56 ~~l~~l~----h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~ 130 (293)
T cd07843 56 NILLKLQ----HPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHR 130 (293)
T ss_pred HHHHhcC----CCCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 5555553 22223332222211 1567899999986 66665432233467777777666665 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.||++. .++++|||....
T Consensus 131 dl~p~nili~~~~~~~l~d~g~~~~ 155 (293)
T cd07843 131 DLKTSNLLLNNRGILKICDFGLARE 155 (293)
T ss_pred cCCHHHEEECCCCcEEEeecCceee
Confidence 9999999965 488999996643
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.48 E-value=6.8e-07 Score=103.37 Aligned_cols=142 Identities=17% Similarity=0.119 Sum_probs=91.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||+|+...+...... -...-++.+|+
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~--------------------------------~~~~~~~~~ei 55 (264)
T cd06653 8 KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQET--------------------------------SKEVNALECEI 55 (264)
T ss_pred eeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchh--------------------------------hHHHHHHHHHH
Confidence 57999999999999964 7999999986432211000 00112356666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+++++ +..-+.+...+.+. ...-+++|||++|.+|.+... ....++...+...+.++. +..+|..|++|+
T Consensus 56 ~~l~~l~----h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~-~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~ 130 (264)
T cd06653 56 QLLKNLR----HDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLK-AYGALTENVTRRYTRQILQGVSYLHSNMIVHR 130 (264)
T ss_pred HHHHHcC----CCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCCEecC
Confidence 6666553 22223333333222 233579999999999987643 122345554444433333 678899999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|++|+||++. .+++.|||...++
T Consensus 131 dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 131 DIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred CCCHHHEEEcCCCCEEECcccccccc
Confidence 9999999965 5889999976543
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >KOG0197|consensus | Back alignment and domain information |
|---|
Probab=98.48 E-value=3.7e-07 Score=110.77 Aligned_cols=134 Identities=13% Similarity=0.069 Sum_probs=101.3
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+-||+|-||.||.|......+||||.+.++.. .+-||.+||+
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m--------------------------------------~~~~f~~Ea~ 253 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM--------------------------------------SPEAFLREAQ 253 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcccceEEecccc--------------------------------------ChhHHHHHHH
Confidence 34799999999999987777999999988621 1236778999
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH-hhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL-LEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l-~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
-+.++++ ..-|..=.|...- ..-.|||||+.-++|.+...- ....++..+++....+++ ++.+-..++||||
T Consensus 254 iMk~L~H----~~lV~l~gV~~~~-~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRD 328 (468)
T KOG0197|consen 254 IMKKLRH----EKLVKLYGVCTKQ-EPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRD 328 (468)
T ss_pred HHHhCcc----cCeEEEEEEEecC-CceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchh
Confidence 9988763 3334444443211 124799999999999888543 235567777877777777 6778899999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
|-.-||||+ .+++-|||+..
T Consensus 329 LAARNiLV~~~~~vKIsDFGLAr 351 (468)
T KOG0197|consen 329 LAARNILVDEDLVVKISDFGLAR 351 (468)
T ss_pred hhhhheeeccCceEEEccccccc
Confidence 999999987 48888999875
|
|
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=98.48 E-value=5e-07 Score=106.84 Aligned_cols=141 Identities=19% Similarity=0.164 Sum_probs=89.4
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+...|..+ ..||.|++|+||+|+.. +|+.||||+........
T Consensus 19 ~~~~~~~~--~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~----------------------------------- 61 (297)
T cd06659 19 PRSLLENY--IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQR----------------------------------- 61 (297)
T ss_pred chhhHHhh--hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccch-----------------------------------
Confidence 33444444 46999999999999965 79999999874321110
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
+-.+.+|...+..+ .+...+.+-..+. .....+++|||++|.++.+.. ....++...+...+.+++ +..
T Consensus 62 --~~~~~~e~~~l~~l----~hp~i~~~~~~~~-~~~~~~iv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~qi~~~L~~ 132 (297)
T cd06659 62 --RELLFNEVVIMRDY----QHQNVVEMYKSYL-VGEELWVLMEFLQGGALTDIV--SQTRLNEEQIATVCESVLQALCY 132 (297)
T ss_pred --HHHHHHHHHHHHhC----CCCchhhhhhhee-eCCeEEEEEecCCCCCHHHHH--hhcCCCHHHHHHHHHHHHHHHHH
Confidence 00112233222222 1111111111111 124568999999999887753 334566666655555554 678
Q ss_pred HHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 556 IFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|..|++|+|++|+||++. .++++|||...
T Consensus 133 LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~ 165 (297)
T cd06659 133 LHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCA 165 (297)
T ss_pred HHhCCeecCCCCHHHeEEccCCcEEEeechhHh
Confidence 9999999999999999965 58999999754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=98.48 E-value=7.1e-07 Score=103.16 Aligned_cols=141 Identities=17% Similarity=0.101 Sum_probs=90.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-|+.|++|.||+|... +|+.||||+.+...... .... .--.+.+|+
T Consensus 8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~----------------------~~~~----------~~~~~~~E~ 55 (265)
T cd06652 8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESP----------------------ETSK----------EVNALECEI 55 (265)
T ss_pred eEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCc----------------------ccHH----------HHHHHHHHH
Confidence 56899999999999975 69999999875321110 0000 001346677
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +..-+.+...+.+- ....+++|||++|.+|.+... ....++...+...+.++. +..+|..|++|+
T Consensus 56 ~~l~~l~----h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~ 130 (265)
T cd06652 56 QLLKNLL----HERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLK-SYGALTENVTRKYTRQILEGVSYLHSNMIVHR 130 (265)
T ss_pred HHHHhcC----CCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCCEecC
Confidence 7776663 22222222222111 123458999999999987643 122345555444444444 678899999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.||+++ .++++|||....
T Consensus 131 dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 131 DIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred CCCHHHEEecCCCCEEECcCccccc
Confidence 9999999975 589999997654
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.9e-07 Score=106.18 Aligned_cols=82 Identities=9% Similarity=-0.017 Sum_probs=56.7
Q ss_pred eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC------
Q psy12972 503 VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT------ 574 (1578)
Q Consensus 503 v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~------ 574 (1578)
+.+...+.. ....++||||++|.+|.++.......++...+...+.++. +..+|..|++|+|++|.||+++
T Consensus 62 v~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~ 140 (258)
T cd05078 62 VLNYGVCVC-GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRK 140 (258)
T ss_pred hheeeEEEe-CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccc
Confidence 444444332 2456899999999999876432223356555555444444 6788999999999999999963
Q ss_pred -----eeEEecCCchh
Q psy12972 575 -----WLYPVDLGDKF 585 (1578)
Q Consensus 575 -----~v~liDfG~~~ 585 (1578)
.+++.|||...
T Consensus 141 ~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 141 TGNPPFIKLSDPGISI 156 (258)
T ss_pred cCCCceEEeccccccc
Confidence 16788998653
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=98.47 E-value=7.8e-07 Score=102.57 Aligned_cols=137 Identities=16% Similarity=0.097 Sum_probs=90.1
Q ss_pred cccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 411 lasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
||.|+.|.||+|+.. +|+.||||+..+..... -..+-.+.+|.+.
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----------------------------------~~~~~~~~~e~~~ 46 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVE----------------------------------TGQQEHIFSEKEI 46 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchh----------------------------------hhHHHHHHHHHHH
Confidence 689999999999975 69999999886431100 0011234556655
Q ss_pred HHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCCC
Q psy12972 490 AERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADPH 567 (1578)
Q Consensus 490 ~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpH 567 (1578)
+.++. +...+.+...+. .....+++|||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|++
T Consensus 47 l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~ 120 (262)
T cd05572 47 LEECN----HPFIVKLYRTFK-DKKYIYMLMEYCLGGELWTILR-DRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLK 120 (262)
T ss_pred HHhCC----CCCEeeeeeeEE-cCCccEEEEecCCCCcHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Confidence 54442 222222222221 2345689999999999987643 123355555555544444 788999999999999
Q ss_pred CCCCCCC---eeEEecCCchhhh
Q psy12972 568 SGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 568 PGNilv~---~v~liDfG~~~~l 587 (1578)
|.||++. .++++|||....+
T Consensus 121 ~~nilv~~~~~~~l~df~~~~~~ 143 (262)
T cd05572 121 PENLLLDSNGYVKLVDFGFAKKL 143 (262)
T ss_pred HHHEEEcCCCCEEEeeCCccccc
Confidence 9999965 5899999976443
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=98.47 E-value=8.4e-07 Score=101.82 Aligned_cols=137 Identities=18% Similarity=0.103 Sum_probs=91.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+|+.++.. +|+.|++|.....-... ...-++.+|.
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----------------------------------~~~~~~~~e~ 50 (256)
T cd08221 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSE-----------------------------------KERRDALNEI 50 (256)
T ss_pred eEecccCCceEEEEEEcCCCcEEEEEEEeecccch-----------------------------------hHHHHHHHHH
Confidence 67999999999999854 79999999753210000 0011345666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.++++. +...+.+...+.+ ....+++|||++|.+|.+..... ...++...+...+.+++ +..+|..|++|+
T Consensus 51 ~~l~~~~----h~~i~~~~~~~~~-~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~ 125 (256)
T cd08221 51 VILSLLQ----HPNIIAYYNHFMD-DNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHR 125 (256)
T ss_pred HHHHhCC----CCCeeEEEeEEec-CCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 6666552 3333444444433 35568999999999998864322 22356666665555544 678899999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.||++. .+++.|||...
T Consensus 126 dl~p~ni~~~~~~~~kl~d~~~~~ 149 (256)
T cd08221 126 DIKTLNIFLTKAGLIKLGDFGISK 149 (256)
T ss_pred CCChHhEEEeCCCCEEECcCcceE
Confidence 9999999965 58999999653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.1e-07 Score=119.19 Aligned_cols=99 Identities=17% Similarity=0.324 Sum_probs=78.9
Q ss_pred cccccceeccc-CCCCcEEEEEEcCCCcccccccHHH---HHHHHHhCCCceEEEEEECccc----hhhHhHcCccccCC
Q psy12972 860 HWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVHNE----QGLARRLGVGSQLP 931 (1578)
Q Consensus 860 ~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~---~~lA~~l~~~~v~~a~VDc~~~----~~L~~k~gV~~~~P 931 (1578)
.+++++.+... ..+++++|+|||+||++|+.+++.. .++.+.+++ +.+.++|++++ .+++++|+|.+ +|
T Consensus 460 ~~~l~~~l~~a~~~gK~VlVdF~A~WC~~Ck~~e~~~~~~~~v~~~l~~--~~~v~vDvt~~~~~~~~l~~~~~v~g-~P 536 (571)
T PRK00293 460 VAELDQALAEAKGKGKPVMLDLYADWCVACKEFEKYTFSDPQVQQALAD--TVLLQADVTANNAEDVALLKHYNVLG-LP 536 (571)
T ss_pred HHHHHHHHHHHHhcCCcEEEEEECCcCHhHHHHHHHhcCCHHHHHHhcC--CEEEEEECCCCChhhHHHHHHcCCCC-CC
Confidence 45555555432 3468999999999999999998875 677777763 78999999853 68999999998 99
Q ss_pred cEEEEc-CCccc--cccCCCCCHHHHHHHHHhh
Q psy12972 932 QIALLT-DGRTS--FFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 932 Tl~lf~-~G~~~--~y~~G~~s~~~L~~fi~~~ 961 (1578)
|+++|. +|+.. ....|..+.+++.+++++.
T Consensus 537 t~~~~~~~G~~i~~~r~~G~~~~~~f~~~L~~~ 569 (571)
T PRK00293 537 TILFFDAQGQEIPDARVTGFMDAAAFAAHLRQL 569 (571)
T ss_pred EEEEECCCCCCcccccccCCCCHHHHHHHHHHh
Confidence 999995 78763 4566889999999999764
|
|
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=98.46 E-value=7.8e-07 Score=101.49 Aligned_cols=137 Identities=18% Similarity=0.143 Sum_probs=91.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.|+.|++|.||+|... +|++||||+....... .+-. -.+..|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------------------------~~~~------~~~~~e~ 50 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS-----------------------------EKER------EDALNEV 50 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC-----------------------------hHHH------HHHHHHH
Confidence 57899999999999965 7999999987532211 0000 1123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh---hcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL---EKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~---~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+.+.+++ +...+.+...+. .....+|+|||++|.+|.+...-. ...++...+...+.+++ +..+|..|++
T Consensus 51 ~~l~~l~----~~~~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~ 125 (258)
T cd08215 51 KILKKLN----HPNIIKYYESFE-EKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKIL 125 (258)
T ss_pred HHHHhcC----CCChhheEEEEe-cCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 4444443 222222222222 225678999999999998764322 24567777666666655 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.||++. .++++|||...
T Consensus 126 H~dl~~~nil~~~~~~~~l~d~~~~~ 151 (258)
T cd08215 126 HRDIKPQNIFLTSNGLVKLGDFGISK 151 (258)
T ss_pred cccCChHHeEEcCCCcEEECCcccee
Confidence 999999999965 48889999653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >TIGR00424 APS_reduc 5'-adenylylsulfate reductase, thioredoxin-independent | Back alignment and domain information |
|---|
Probab=98.46 E-value=5.3e-08 Score=119.79 Aligned_cols=83 Identities=20% Similarity=0.303 Sum_probs=61.3
Q ss_pred hccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcce--eeeeecc--cC-ccccccCCcc
Q psy12972 746 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGF--FTVHYDL--FG-TTDGFSGQDS 820 (1578)
Q Consensus 746 ~k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~--v~~~~~~--~~-~~~~i~g~~~ 820 (1578)
..+.++..||+..+...+.+++|||.||||||+||+.+.|.|+++|+++++.++.+ ++|+.+. ++ +...+
T Consensus 352 ~Vv~L~~~nf~~~v~~~~~~k~VLV~FyApWC~~Ck~m~P~~eelA~~~~~~~v~~~kVdvD~~~~~~~~~~~~I----- 426 (463)
T TIGR00424 352 NVVSLSRPGIENLLKLEERKEAWLVVLYAPWCPFCQAMEASYLELAEKLAGSGVKVAKFRADGDQKEFAKQELQL----- 426 (463)
T ss_pred CeEECCHHHHHHHHhhhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHhccCCcEEEEEECCCCccHHHHHHcCC-----
Confidence 34567788999988545788999999999999999999999999999998754433 4443221 11 23333
Q ss_pred ccccccccccCcccccccccc
Q psy12972 821 ASRNFHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 821 ~~~~~~~i~~~Ptiklf~~~~ 841 (1578)
..+||+.+|+++.
T Consensus 427 --------~~~PTii~Fk~g~ 439 (463)
T TIGR00424 427 --------GSFPTILFFPKHS 439 (463)
T ss_pred --------CccceEEEEECCC
Confidence 3449999998764
|
This enzyme, involved in the assimilation of inorganic sulfate, is closely related to the thioredoxin-dependent PAPS reductase of Bacteria (CysH) and Saccharomyces cerevisiae. However, it has its own C-terminal thioredoxin-like domain and is not thioredoxin-dependent. Also, it has a substrate preference for 5'-adenylylsulfate (APS) over 3'-phosphoadenylylsulfate (PAPS) so the pathway does not require an APS kinase (CysC) to convert APS to PAPS. Arabidopsis thaliana appears to have three isozymes, all able to complement E. coli CysH mutants (even in backgrounds lacking thioredoxin or APS kinase) but likely localized to different compartments in Arabidopsis. |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=98.46 E-value=4.7e-07 Score=109.79 Aligned_cols=135 Identities=16% Similarity=0.172 Sum_probs=85.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|.||+|+.. +|+.||||+..-..... . ....+.+|+
T Consensus 22 ~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-------------------------~----------~~~~~~~E~ 66 (353)
T cd07850 22 KPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNV-------------------------T----------HAKRAYREL 66 (353)
T ss_pred EEeccCCCEEEEEEEECCCCCEEEEEecCccccCh-------------------------h----------HHHHHHHHH
Confidence 68999999999999964 89999999763111000 0 001123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC-----CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD-----KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~-----~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
..+.++. +..-+.+...+.. .....+|||||++| .+.+.. ...++...+...+.+++ +..+|..|
T Consensus 67 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~g 138 (353)
T cd07850 67 VLMKLVN----HKNIIGLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVI---QMDLDHERMSYLLYQMLCGIKHLHSAG 138 (353)
T ss_pred HHHHhcC----CCCCcceeeeeccCCCccccCcEEEEEeccCC-CHHHHH---hhcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 5555442 2222222222211 11235899999977 444432 22366666655555554 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|+||++. .++++|||....
T Consensus 139 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 167 (353)
T cd07850 139 IIHRDLKPSNIVVKSDCTLKILDFGLART 167 (353)
T ss_pred eeeCCCCHHHEEECCCCCEEEccCcccee
Confidence 99999999999965 589999997643
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=98.46 E-value=4.5e-07 Score=104.30 Aligned_cols=135 Identities=15% Similarity=0.143 Sum_probs=90.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|.||+|+.. +|+.||+|+......... ...-++..|.
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~----------------------------------~~~~~~~~e~ 51 (258)
T cd05578 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEK----------------------------------GSVRNVLNER 51 (258)
T ss_pred EEeccCCCceEEEEEEccCCcEEEEEEEehhhhcch----------------------------------hHHHHHHHHH
Confidence 68999999999999976 699999998863211000 0011234444
Q ss_pred HHHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.++++. ++. +++++. .-....++||||++|.+|.+.... ...++...+...+.+++ +..+|..|++|
T Consensus 52 ~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h 123 (258)
T cd05578 52 RILQELN-----HPF--LVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQ-KVKFSEEQVKFWICEIVLALEYLHSKGIIH 123 (258)
T ss_pred HHHHhCC-----CCC--hHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHh-cCCcCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 4444432 121 222221 122346899999999999876432 23567767766666655 77899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|.||++. .++++|||...
T Consensus 124 ~dl~~~nil~~~~~~~~l~d~~~~~ 148 (258)
T cd05578 124 RDIKPDNILLDEQGHVHITDFNIAT 148 (258)
T ss_pred cCCCHHHeEEcCCCCEEEeeccccc
Confidence 99999999965 58999999754
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=4.8e-07 Score=116.31 Aligned_cols=73 Identities=16% Similarity=0.149 Sum_probs=48.8
Q ss_pred CceEEEEeccCCCcCCchhhHhhcCC-----------------C--HHHHHHHHHHHH--HHHHHHcCccccCCCCCCCC
Q psy12972 514 STRVLTTEFIDGVKISDKEGLLEKGF-----------------S--LADVDRKLFTAF--AEQIFQTGFVHADPHSGNDV 572 (1578)
Q Consensus 514 t~~VLVME~i~G~~l~d~~~l~~~~~-----------------~--~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNil 572 (1578)
...+|||||++|.+|.++........ . ...+...+.+++ +..+|..|++|||+||.|||
T Consensus 208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NIL 287 (566)
T PLN03225 208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNII 287 (566)
T ss_pred CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEE
Confidence 35679999999999877643111000 0 011112222222 77899999999999999999
Q ss_pred CC----eeEEecCCchhh
Q psy12972 573 NT----WLYPVDLGDKFR 586 (1578)
Q Consensus 573 v~----~v~liDfG~~~~ 586 (1578)
+. .++++|||....
T Consensus 288 l~~~~~~~KL~DFGlA~~ 305 (566)
T PLN03225 288 FSEGSGSFKIIDLGAAAD 305 (566)
T ss_pred EeCCCCcEEEEeCCCccc
Confidence 64 489999998743
|
|
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=98.46 E-value=9.1e-07 Score=102.43 Aligned_cols=142 Identities=16% Similarity=0.128 Sum_probs=92.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|... +|+.||+|+........- ....-..+.+|+
T Consensus 8 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~--------------------------------~~~~~~~~~~e~ 55 (266)
T cd06651 8 KLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPE--------------------------------TSKEVSALECEI 55 (266)
T ss_pred ceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCch--------------------------------hHHHHHHHHHHH
Confidence 67999999999999865 699999998754321100 000111346666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..+.+++ +..-+.+...+.+.. ...+++|||++|.+|.+... ....++...+...+.+++ +..+|..|++|+
T Consensus 56 ~~l~~l~----h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~ 130 (266)
T cd06651 56 QLLKNLQ----HERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLK-AYGALTESVTRKYTRQILEGMSYLHSNMIVHR 130 (266)
T ss_pred HHHHHcC----CCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeC
Confidence 6665553 222233334433222 33579999999999987643 122355555555444444 678899999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|++|.||++. .+++.|||....+
T Consensus 131 ~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 131 DIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred CCCHHHEEECCCCCEEEccCCCcccc
Confidence 9999999965 5899999976443
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >PHA02278 thioredoxin-like protein | Back alignment and domain information |
|---|
Probab=98.45 E-value=5.7e-08 Score=96.50 Aligned_cols=72 Identities=7% Similarity=0.076 Sum_probs=49.9
Q ss_pred cccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeec-----ccCccccccCCccccccccc
Q psy12972 754 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYD-----LFGTTDGFSGQDSASRNFHN 827 (1578)
Q Consensus 754 nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~-----~~~~~~~i~g~~~~~~~~~~ 827 (1578)
+|...+ +++++++|.|||||||+|+.++|.++++++.+... .+..++++.+ .++....+.
T Consensus 6 ~~~~~i---~~~~~vvV~F~A~WCgpCk~m~p~l~~l~~~~~~~~~~~~vdvd~~~~d~~~l~~~~~I~----------- 71 (103)
T PHA02278 6 DLNTAI---RQKKDVIVMITQDNCGKCEILKSVIPMFQESGDIKKPILTLNLDAEDVDREKAVKLFDIM----------- 71 (103)
T ss_pred HHHHHH---hCCCcEEEEEECCCCHHHHhHHHHHHHHHhhhcCCceEEEEECCccccccHHHHHHCCCc-----------
Confidence 445555 36889999999999999999999999999886543 3444444322 133333333
Q ss_pred cccCcccccccccc
Q psy12972 828 HMYNPFDDVFSEGF 841 (1578)
Q Consensus 828 i~~~Ptiklf~~~~ 841 (1578)
..||+.+|++|-
T Consensus 72 --~iPT~i~fk~G~ 83 (103)
T PHA02278 72 --STPVLIGYKDGQ 83 (103)
T ss_pred --cccEEEEEECCE
Confidence 349998888764
|
|
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=98.45 E-value=5e-07 Score=105.72 Aligned_cols=137 Identities=13% Similarity=0.167 Sum_probs=85.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||+|+.+...... +. -.+.+|+
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~---~~---------------------------------~~~~~e~ 50 (286)
T cd06622 7 DELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDES---KF---------------------------------NQIIMEL 50 (286)
T ss_pred hhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHH---HH---------------------------------HHHHHHH
Confidence 46899999999999976 89999999875322110 00 0123333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh--hcCCCHHHHHHHHHHHH--HHHHHH-cCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL--EKGFSLADVDRKLFTAF--AEQIFQ-TGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~--~~~~~~~~v~~~l~~~~--l~~i~~-~G~v 562 (1578)
..+.++. +..-+.+...+. .....+|||||++|.++..+.... ...++...+...+.+++ +..+|. .|++
T Consensus 51 ~~l~~~~----~~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~ 125 (286)
T cd06622 51 DILHKAV----SPYIVDFYGAFF-IEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNII 125 (286)
T ss_pred HHHHhcC----CCcHHhhhhhee-cCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEe
Confidence 3333322 111111111111 123457999999999997653211 12566655555555544 567775 6999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+|++|.||++. .++++|||....
T Consensus 126 H~dl~p~nil~~~~~~~~l~dfg~~~~ 152 (286)
T cd06622 126 HRDVKPTNVLVNGNGQVKLCDFGVSGN 152 (286)
T ss_pred eCCCCHHHEEECCCCCEEEeecCCccc
Confidence 999999999975 589999997644
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.45 E-value=7.2e-07 Score=101.78 Aligned_cols=134 Identities=19% Similarity=0.160 Sum_probs=88.0
Q ss_pred cccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 411 lasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
||.|++|+||+|+.. +|+.||||+.+......- .....+..|...
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~----------------------------------~~~~~~~~e~~~ 46 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKR----------------------------------KEVEHTLTERNI 46 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcch----------------------------------HHHHHHHHHHHH
Confidence 689999999999975 699999998865432110 001123344444
Q ss_pred HHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 490 AERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 490 ~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
++++. + + .++.++..+ ....++||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 47 l~~l~----h-~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~ 118 (250)
T cd05123 47 LSRIN----H-P--FIVKLHYAFQTEEKLYLVLEYAPGGELFSHLS-KEGRFSEERARFYAAEIVLALEYLHSLGIIYRD 118 (250)
T ss_pred HHHcC----C-C--cHHHHHHHeecCCeeEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence 43332 1 1 122222222 234579999999999877643 122466666666655555 7789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||++. .++++|||....
T Consensus 119 l~p~ni~~~~~~~~~l~d~~~~~~ 142 (250)
T cd05123 119 LKPENILLDADGHIKLTDFGLAKE 142 (250)
T ss_pred CCcceEEEcCCCcEEEeecCccee
Confidence 999999965 589999997643
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=5.9e-07 Score=113.14 Aligned_cols=72 Identities=15% Similarity=0.174 Sum_probs=49.6
Q ss_pred CceEEEEeccCCCcCCchhhHhh-----------------------cCCCHHHHHHHHHHHH--HHHHHHcCccccCCCC
Q psy12972 514 STRVLTTEFIDGVKISDKEGLLE-----------------------KGFSLADVDRKLFTAF--AEQIFQTGFVHADPHS 568 (1578)
Q Consensus 514 t~~VLVME~i~G~~l~d~~~l~~-----------------------~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHP 568 (1578)
...+|||||++|.+|.++..-.. ...+...+...+.++. +..+|..|++|+|+||
T Consensus 258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp 337 (507)
T PLN03224 258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKP 337 (507)
T ss_pred CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCch
Confidence 34689999999999987643110 0112222333333333 6789999999999999
Q ss_pred CCCCCC---eeEEecCCchh
Q psy12972 569 GNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 569 GNilv~---~v~liDfG~~~ 585 (1578)
.|||+. .++++|||...
T Consensus 338 ~NILl~~~~~~kL~DFGla~ 357 (507)
T PLN03224 338 ENLLVTVDGQVKIIDFGAAV 357 (507)
T ss_pred HhEEECCCCcEEEEeCcCcc
Confidence 999965 58999999763
|
|
| >KOG0913|consensus | Back alignment and domain information |
|---|
Probab=98.45 E-value=6.1e-08 Score=105.78 Aligned_cols=101 Identities=23% Similarity=0.360 Sum_probs=91.5
Q ss_pred EEEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 854 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 854 ~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
.+..++.+|+...+ .+-|+++|+||||+.|+.+.|.|+..|.--.+.+|.+++||.+.++.|..+|-|.. .|||
T Consensus 25 ~~~~~~eenw~~~l-----~gewmi~~~ap~~psc~~~~~~~~~~a~~s~dL~v~va~VDvt~npgLsGRF~vta-LptI 98 (248)
T KOG0913|consen 25 KLTRIDEENWKELL-----TGEWMIEFGAPWCPSCSDLIPHLENFATVSLDLGVKVAKVDVTTNPGLSGRFLVTA-LPTI 98 (248)
T ss_pred eeEEecccchhhhh-----chHHHHHhcCCCCccccchHHHHhccCCccCCCceeEEEEEEEeccccceeeEEEe-cceE
Confidence 45678999999976 67799999999999999999999999998888899999999999999999999997 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
.-.++|....| .|.|+.+++++|+..+
T Consensus 99 YHvkDGeFrry-sgaRdk~dfisf~~~r 125 (248)
T KOG0913|consen 99 YHVKDGEFRRY-SGARDKNDFISFEEHR 125 (248)
T ss_pred EEeeccccccc-cCcccchhHHHHHHhh
Confidence 99999976655 5999999999999643
|
|
| >KOG2270|consensus | Back alignment and domain information |
|---|
Probab=98.45 E-value=7.7e-07 Score=103.47 Aligned_cols=157 Identities=20% Similarity=0.221 Sum_probs=108.4
Q ss_pred hhccccCCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHh--hhC----CCCCHHHHHHHHH
Q psy12972 401 QLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAG--FLY----PKFDFQWVINELK 474 (1578)
Q Consensus 401 ~iF~~fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~--~~~----~~~~~~~~~~e~~ 474 (1578)
.++.+++ -.|..|--|-||.|+-.+|..+||||-+..|--.-.+| +.+. +-| -..+...++.-|+
T Consensus 143 G~i~~in-GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRd--------RYV~GEfRFRhgyck~NPRKMVk~WA 213 (520)
T KOG2270|consen 143 GVIVEIN-GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRD--------RYVSGEFRFRHGYCKHNPRKMVKTWA 213 (520)
T ss_pred Ceeeecc-cccccCccceeEeeecCCCceEEEEEEeeeEEEEechh--------hhccceeeeecccccCCcHHHHHHHH
Confidence 3455664 47899999999999999999999999987664433333 2211 111 1235567788777
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHH---HHHHHHHH
Q psy12972 475 VPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLAD---VDRKLFTA 551 (1578)
Q Consensus 475 ~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~---v~~~l~~~ 551 (1578)
..|.+|+.|++.. +|.+|+|+ +-..+||||+|+- ..-.-...|....+++.+ +...++..
T Consensus 214 ---------EKE~RNLkRl~~a-----GIP~PePI--lLk~hVLVM~FlG-rdgw~aPkLKd~~ls~~ka~~~Y~~~v~~ 276 (520)
T KOG2270|consen 214 ---------EKEMRNLKRLNNA-----GIPCPEPI--LLKNHVLVMEFLG-RDGWAAPKLKDASLSTSKARELYQQCVRI 276 (520)
T ss_pred ---------HHHHHHHHHHHhc-----CCCCCCce--eeecceEeeeecc-CCCCcCcccccccCChHHHHHHHHHHHHH
Confidence 6899999999853 57888888 6678999999993 221112224445555433 33344444
Q ss_pred HHHHHHHcCccccCCCCCCCC--CCeeEEecCCc
Q psy12972 552 FAEQIFQTGFVHADPHSGNDV--NTWLYPVDLGD 583 (1578)
Q Consensus 552 ~l~~i~~~G~vH~DpHPGNil--v~~v~liDfG~ 583 (1578)
.=.+....++|||||.--|+| .+.+++||-+-
T Consensus 277 MR~lY~~c~LVHADLSEfN~LyhdG~lyiIDVSQ 310 (520)
T KOG2270|consen 277 MRRLYQKCRLVHADLSEFNLLYHDGKLYIIDVSQ 310 (520)
T ss_pred HHHHHHHhceeccchhhhhheEECCEEEEEEccc
Confidence 444556899999999999999 46799999773
|
|
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=98.44 E-value=6.1e-07 Score=108.55 Aligned_cols=135 Identities=17% Similarity=0.193 Sum_probs=88.5
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||+|++|.||+|.. .+|+.||||+......... .+..+.+|+
T Consensus 23 ~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------------~~~~~~~Ei 67 (345)
T cd07877 23 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII-----------------------------------HAKRTYREL 67 (345)
T ss_pred EEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhH-----------------------------------HHHHHHHHH
Confidence 6899999999999985 5899999998864321100 011234466
Q ss_pred HHHHHHHHhhCCCCCeeecEEee-----CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW-----DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~-----~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
..+.+++ +...+.+..++. ......+++|++. |..+.++. ....++...+...+.+++ +..+|..|
T Consensus 68 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 140 (345)
T cd07877 68 RLLKHMK----HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 140 (345)
T ss_pred HHHHHcC----CCcccceeeeeeecccccccccEEEEehhc-ccCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 6666553 222233333321 1113357889987 66776653 334566666555555544 68899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.||++. .++++|||...
T Consensus 141 ivH~dlkp~NIll~~~~~~kl~dfg~~~ 168 (345)
T cd07877 141 IIHRDLKPSNLAVNEDCELKILDFGLAR 168 (345)
T ss_pred eeecCCChHHEEEcCCCCEEEecccccc
Confidence 99999999999965 58999999754
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=98.44 E-value=8.1e-07 Score=101.72 Aligned_cols=138 Identities=12% Similarity=0.050 Sum_probs=90.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|... +++.||||+....--. ....-.+.+|+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------------------------------~~~~~~~~~e~ 50 (256)
T cd08220 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT-----------------------------------KDERLAAQNEC 50 (256)
T ss_pred EEecccCceEEEEEEEcCCCcEEEEEEEeccccc-----------------------------------cHHHHHHHHHH
Confidence 67999999999999864 7899999987532100 00011245566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.++++. +..-+.+...+ ......+|||||++|.+|.+..... ...++...+...+.+++ +..+|..|++|+
T Consensus 51 ~~l~~~~----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~ 125 (256)
T cd08220 51 QVLKLLS----HPNIIEYYENF-LEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHR 125 (256)
T ss_pred HHHhhCC----CCchhheeeeE-ecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 6555553 21112222222 1234568999999999998875322 12356666666555554 678899999999
Q ss_pred CCCCCCCCCC----eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT----WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~----~v~liDfG~~~~ 586 (1578)
|++|+||++. .+++.|||....
T Consensus 126 dl~~~nil~~~~~~~~~l~d~~~~~~ 151 (256)
T cd08220 126 DLKTQNILLDKHKMVVKIGDFGISKI 151 (256)
T ss_pred CCCHHHEEEcCCCCEEEEccCCCcee
Confidence 9999999975 368899997644
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=98.44 E-value=6.1e-07 Score=105.97 Aligned_cols=139 Identities=19% Similarity=0.202 Sum_probs=89.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
..||.|++|+||+|+.. +|+.||||+........ .. ...+.+|+
T Consensus 18 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~--------------------~~---------------~~~~~~e~ 62 (310)
T cd07865 18 AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE--------------------GF---------------PITALREI 62 (310)
T ss_pred EEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC--------------------Cc---------------hhHHHHHH
Confidence 67999999999999965 79999999764321100 00 01123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC-------CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD-------KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~-------~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
+.++++. +...+.+..++.. ..+..+|||||+.| .+.+...-....++...+...+.+++ +..+|.
T Consensus 63 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~ 137 (310)
T cd07865 63 KILQLLK----HENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHR 137 (310)
T ss_pred HHHHhCC----CCCccceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 5555443 2223333333221 22345899999976 44443221222567777766666665 788999
Q ss_pred cCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 559 TGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
.|++|+|++|.||+++ .+++.|||....+
T Consensus 138 ~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 169 (310)
T cd07865 138 NKILHRDMKAANILITKDGILKLADFGLARAF 169 (310)
T ss_pred CCeeccCCCHHHEEECCCCcEEECcCCCcccc
Confidence 9999999999999976 4888999976433
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.44 E-value=5.5e-07 Score=105.10 Aligned_cols=137 Identities=17% Similarity=0.164 Sum_probs=88.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|+.|+||+|+.+ +|+.||||+........ ... -++.+|.
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~~~------~~~~~E~ 49 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDE-----------------------------GVP------STAIREI 49 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeecccccc-----------------------------cch------hHHHHHH
Confidence 56899999999999965 89999999876432110 000 0123444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..++++. +..-+.+...+.+ ....+++|||++| ++.+...... ..++...+...+.+++ +..+|..|++|+
T Consensus 50 ~~l~~l~----~~~iv~~~~~~~~-~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~ 123 (283)
T cd07835 50 SLLKELN----HPNIVRLLDVVHS-ENKLYLVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHR 123 (283)
T ss_pred HHHHhcC----CCCccCHhheecc-CCeEEEEEeccCc-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCC
Confidence 4444443 2222333333322 2456899999964 6665532111 2466666666555555 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|+||++. .+++.|||....
T Consensus 124 dl~p~nil~~~~~~~~l~df~~~~~ 148 (283)
T cd07835 124 DLKPQNLLIDREGALKLADFGLARA 148 (283)
T ss_pred CCCHHHEEEcCCCcEEEeecccccc
Confidence 9999999975 589999997643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=98.44 E-value=4.3e-07 Score=106.06 Aligned_cols=136 Identities=18% Similarity=0.165 Sum_probs=88.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|+||+|+.. +|+.||||+.+...... + .+-.+.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~------~~~~~~~E~ 50 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-----------------------------G------VPSTAIREI 50 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEcccccccc-----------------------------c------cchHHHHHH
Confidence 67999999999999865 79999999875322100 0 001234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +..-+.+-..+. .....++||||+.| .+.+..... ...++...+...+.+++ +..+|..|++|+
T Consensus 51 ~~l~~l~----h~~i~~~~~~~~-~~~~~~~v~e~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~ 124 (284)
T cd07860 51 SLLKELN----HPNIVKLLDVIH-TENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 124 (284)
T ss_pred HHHHhcC----CCCCcchhhhcc-cCCcEEEEeecccc-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 5555553 222222222222 23456899999965 555543221 23456666666655555 688999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|+||++. .+++.|||...
T Consensus 125 ~l~p~nill~~~~~~~l~dfg~~~ 148 (284)
T cd07860 125 DLKPQNLLINTEGAIKLADFGLAR 148 (284)
T ss_pred CCCHHHEEECCCCCEEEeeccchh
Confidence 9999999965 58999999754
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd02957 Phd_like Phosducin (Phd)-like family; composed of Phd and Phd-like proteins (PhLP), characterized as cytosolic regulators of G protein functions | Back alignment and domain information |
|---|
Probab=98.44 E-value=5.4e-08 Score=98.48 Aligned_cols=77 Identities=14% Similarity=0.149 Sum_probs=55.2
Q ss_pred cccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeec--ccCccccccCCccccccccc
Q psy12972 750 TTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYD--LFGTTDGFSGQDSASRNFHN 827 (1578)
Q Consensus 750 l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~--~~~~~~~i~g~~~~~~~~~~ 827 (1578)
+++.+|.+.+...+.+++++|.||||||++|+.+.|.++++|+.+.+.. ++.++.+ .+++..+
T Consensus 9 i~~~~f~~~i~~~~~~~~vvv~F~a~~c~~C~~l~~~l~~la~~~~~v~--f~~vd~~~~~l~~~~~------------- 73 (113)
T cd02957 9 ISSKEFLEEVTKASKGTRVVVHFYEPGFPRCKILDSHLEELAAKYPETK--FVKINAEKAFLVNYLD------------- 73 (113)
T ss_pred EcHHHHHHHHHccCCCCEEEEEEeCCCCCcHHHHHHHHHHHHHHCCCcE--EEEEEchhhHHHHhcC-------------
Confidence 4556788888654456899999999999999999999999999987543 3333333 2333333
Q ss_pred cccCcccccccccc
Q psy12972 828 HMYNPFDDVFSEGF 841 (1578)
Q Consensus 828 i~~~Ptiklf~~~~ 841 (1578)
+...||+.+|.+|-
T Consensus 74 i~~~Pt~~~f~~G~ 87 (113)
T cd02957 74 IKVLPTLLVYKNGE 87 (113)
T ss_pred CCcCCEEEEEECCE
Confidence 33449998888664
|
Phd and PhLPs specifically bind G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane and impeding G protein-mediated signal transduction by inhibiting the formation of a functional G protein trimer (G protein alphabetagamma). Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-te |
| >KOG0598|consensus | Back alignment and domain information |
|---|
Probab=98.44 E-value=5.5e-07 Score=104.90 Aligned_cols=134 Identities=19% Similarity=0.164 Sum_probs=84.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-||-||+|+|+..+-+ +|+-.|+||.+... +++. .+ .+.+ ..|.
T Consensus 31 kviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~----------------iv~~-----------~e-~~~~------~~Er 76 (357)
T KOG0598|consen 31 KVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKK----------------IVEK-----------KE-VRHT------KAER 76 (357)
T ss_pred eeeeccCCceEEEEEEcccCceeehhhhhhhH----------------hhhh-----------hh-HHHH------HHHH
Confidence 68999999999999865 68999999885321 1110 00 0111 2233
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHH-HHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDR-KLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~-~l~~~~--l~~i~~~G~vH 563 (1578)
.-+.++ ++| ..|.-.|.--+ ++-+||+||+.|+.|--. +.+.|.=.+..++ -+.++. +..+|..|+||
T Consensus 77 ~IL~~v-----~hP-Fiv~l~ysFQt~~kLylVld~~~GGeLf~h--L~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiy 148 (357)
T KOG0598|consen 77 NILSKI-----KHP-FIVKLIYSFQTEEKLYLVLDYLNGGELFYH--LQREGRFSEDRARFYLAEIVLALGYLHSKGIIY 148 (357)
T ss_pred HHHHhC-----CCC-cEeeeEEecccCCeEEEEEeccCCccHHHH--HHhcCCcchhHHHHHHHHHHHHHHHHHhCCeee
Confidence 333332 223 33444443333 345899999999888543 3433332333333 334433 78999999999
Q ss_pred cCCCCCCCCCC---eeEEecCCch
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~ 584 (1578)
||+||.|||++ .+++.|||..
T Consensus 149 RDlKPENILLd~~GHi~LtDFgL~ 172 (357)
T KOG0598|consen 149 RDLKPENILLDEQGHIKLTDFGLC 172 (357)
T ss_pred ccCCHHHeeecCCCcEEEeccccc
Confidence 99999999954 4788888864
|
|
| >cd02954 DIM1 Dim1 family; Dim1 is also referred to as U5 small nuclear ribonucleoprotein particle (snRNP)-specific 15kD protein | Back alignment and domain information |
|---|
Probab=98.43 E-value=9.2e-08 Score=96.07 Aligned_cols=73 Identities=18% Similarity=0.330 Sum_probs=52.3
Q ss_pred ccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccccccccC
Q psy12972 755 FEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNFHNHMYN 831 (1578)
Q Consensus 755 f~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i~~~ 831 (1578)
|+..+. .+++++++|.|||+|||+|+.++|.++++|+++.+. +.++.++.+. ++...++.+-
T Consensus 5 ~~~~i~-~~~~~~vVV~F~A~WCgpCk~m~P~le~la~~~~~~-v~f~kVDvD~~~~la~~~~V~~i------------- 69 (114)
T cd02954 5 VDQAIL-SEEEKVVVIRFGRDWDPVCMQMDEVLAKIAEDVSNF-AVIYLVDIDEVPDFNKMYELYDP------------- 69 (114)
T ss_pred HHHHHh-ccCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCc-eEEEEEECCCCHHHHHHcCCCCC-------------
Confidence 344442 246789999999999999999999999999999765 3444555444 3344444443
Q ss_pred ccccccccccc
Q psy12972 832 PFDDVFSEGFN 842 (1578)
Q Consensus 832 Ptiklf~~~~~ 842 (1578)
||+.+|++|-.
T Consensus 70 PTf~~fk~G~~ 80 (114)
T cd02954 70 PTVMFFFRNKH 80 (114)
T ss_pred CEEEEEECCEE
Confidence 99989987643
|
It is a component of U5 snRNP, which pre-assembles with U4/U6 snRNPs to form a [U4/U6:U5] tri-snRNP complex required for pre-mRNA splicing. Dim1 interacts with multiple splicing-associated proteins, suggesting that it functions at multiple control points in the splicing of pre-mRNA as part of a large spliceosomal complex involving many protein-protein interactions. U5 snRNP contains seven core proteins (common to all snRNPs) and nine U5-specific proteins, one of which is Dim1. Dim1 adopts a thioredoxin fold but does not contain the redox active CXXC motif. It is essential for G2/M phase transition, as a consequence to its role in pre-mRNA splicing. |
| >cd03005 PDI_a_ERp46 PDIa family, endoplasmic reticulum protein 46 (ERp46) subfamily; ERp46 is an ER-resident protein containing three redox active TRX domains | Back alignment and domain information |
|---|
Probab=98.43 E-value=7e-08 Score=95.13 Aligned_cols=76 Identities=20% Similarity=0.357 Sum_probs=52.4
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC--Ccceeeeeecc---cCccccccCCccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHYDL---FGTTDGFSGQDSASR 823 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~--~vg~v~~~~~~---~~~~~~i~g~~~~~~ 823 (1578)
.++..+|+..+.+ ++++|.||||||++|++++|.|+++|+.+++. .+.+..++++. .|+..+
T Consensus 4 ~l~~~~f~~~~~~----~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~--------- 70 (102)
T cd03005 4 ELTEDNFDHHIAE----GNHFVKFFAPWCGHCKRLAPTWEQLAKKFNNENPSVKIAKVDCTQHRELCSEFQ--------- 70 (102)
T ss_pred ECCHHHHHHHhhc----CCEEEEEECCCCHHHHHhCHHHHHHHHHHhccCCcEEEEEEECCCChhhHhhcC---------
Confidence 4566678888732 35999999999999999999999999999872 33333332221 333333
Q ss_pred cccccccCcccccccccc
Q psy12972 824 NFHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 824 ~~~~i~~~Ptiklf~~~~ 841 (1578)
+...|++.+|..+.
T Consensus 71 ----v~~~Pt~~~~~~g~ 84 (102)
T cd03005 71 ----VRGYPTLLLFKDGE 84 (102)
T ss_pred ----CCcCCEEEEEeCCC
Confidence 34458888887653
|
Yeast complementation studies show that ERp46 can substitute for protein disulfide isomerase (PDI) function in vivo. It has been detected in many tissues, however, transcript and protein levels do not correlate in all tissues, suggesting regulation at a posttranscriptional level. An identical protein, named endoPDI, has been identified as an endothelial PDI that is highly expressed in the endothelium of tumors and hypoxic lesions. It has a protective effect on cells exposed to hypoxia. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1578 | ||||
| 2cug_A | 88 | Solution Structure Of The J Domain Of The Pseudo Dn | 3e-18 | ||
| 2dn9_A | 79 | Solution Structure Of J-Domain From The Dnaj Homolo | 4e-15 | ||
| 2ctr_A | 88 | Solution Structure Of J-Domain From Human Dnaj Subf | 2e-14 | ||
| 2ctp_A | 78 | Solution Structure Of J-Domain From Human Dnaj Subf | 7e-14 | ||
| 1hdj_A | 77 | Human Hsp40 (Hdj-1), Nmr Length = 77 | 2e-13 | ||
| 2ej7_A | 82 | Solution Structure Of The Dnaj Domain Of The Human | 2e-13 | ||
| 1xbl_A | 107 | Nmr Structure Of The J-Domain (Residues 2-76) In Th | 1e-12 | ||
| 2lgw_A | 99 | Solution Structure Of The J Domain Of Hsj1a Length | 1e-12 | ||
| 1bqz_A | 77 | J-Domain (Residues 1-77) Of The Escherichia Coli N- | 2e-12 | ||
| 1bq0_A | 103 | J-Domain (Residues 1-77) Of The Escherichia Coli N- | 2e-12 | ||
| 3apq_A | 210 | Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt | 3e-11 | ||
| 2dmx_A | 92 | Solution Structure Of The J Domain Of Dnaj Homolog | 6e-11 | ||
| 3apo_A | 780 | Crystal Structure Of Full-Length Erdj5 Length = 780 | 7e-11 | ||
| 2lo1_A | 71 | Nmr Structure Of The Protein Bc008182, A Dnaj-Like | 5e-10 | ||
| 3lz8_A | 329 | Structure Of A Putative Chaperone Dnaj From Klebsie | 8e-10 | ||
| 2f3i_A | 150 | Solution Structure Of A Subunit Of Rna Polymerase I | 1e-09 | ||
| 2ctw_A | 109 | Solution Structure Of J-Domain From Mouse Dnaj Subf | 2e-09 | ||
| 2och_A | 73 | J-domain Of Dnj-12 From Caenorhabditis Elegans Leng | 1e-08 | ||
| 2kqx_A | 73 | Nmr Structure Of The J-Domain (Residues 2-72) In Th | 2e-08 | ||
| 2o37_A | 92 | J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From S | 6e-08 | ||
| 2yua_A | 99 | Solution Structure Of The Dnaj Domain From Human Wi | 8e-07 | ||
| 2y4t_A | 450 | Crystal Structure Of The Human Co-Chaperone P58(Ipk | 5e-06 | ||
| 2y4u_A | 450 | Crystal Structure Of Human P58(Ipk) In Space Group | 5e-06 | ||
| 1wjz_A | 94 | Soluiotn Structure Of J-Domain Of Mouse Dnaj Like P | 1e-05 | ||
| 2l6l_A | 155 | Solution Structure Of Human J-Protein Co-Chaperone, | 2e-05 | ||
| 2l5l_A | 136 | Solution Structure Of Thioredoxin From Bacteroides | 2e-04 |
| >pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88 | Back alignment and structure |
|
| >pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79 | Back alignment and structure |
|
| >pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88 | Back alignment and structure |
|
| >pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78 | Back alignment and structure |
|
| >pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77 | Back alignment and structure |
|
| >pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82 | Back alignment and structure |
|
| >pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107 | Back alignment and structure |
|
| >pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99 | Back alignment and structure |
|
| >pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77 | Back alignment and structure |
|
| >pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103 | Back alignment and structure |
|
| >pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210 | Back alignment and structure |
|
| >pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92 | Back alignment and structure |
|
| >pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780 | Back alignment and structure |
|
| >pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71 | Back alignment and structure |
|
| >pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329 | Back alignment and structure |
|
| >pdb|2F3I|A Chain A, Solution Structure Of A Subunit Of Rna Polymerase Ii Length = 150 | Back alignment and structure |
|
| >pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109 | Back alignment and structure |
|
| >pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73 | Back alignment and structure |
|
| >pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The Escherichia Coli Cbpa Length = 73 | Back alignment and structure |
|
| >pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From Saccharomyces Cerevisiae Length = 92 | Back alignment and structure |
|
| >pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human Williams- Beuren Syndrome Chromosome Region 18 Protein Length = 99 | Back alignment and structure |
|
| >pdb|2Y4T|A Chain A, Crystal Structure Of The Human Co-Chaperone P58(Ipk) Length = 450 | Back alignment and structure |
|
| >pdb|2Y4U|A Chain A, Crystal Structure Of Human P58(Ipk) In Space Group P312 Length = 450 | Back alignment and structure |
|
| >pdb|1WJZ|A Chain A, Soluiotn Structure Of J-Domain Of Mouse Dnaj Like Protein Length = 94 | Back alignment and structure |
|
| >pdb|2L6L|A Chain A, Solution Structure Of Human J-Protein Co-Chaperone, Dph4 Length = 155 | Back alignment and structure |
|
| >pdb|2L5L|A Chain A, Solution Structure Of Thioredoxin From Bacteroides Vulgatus Length = 136 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210 | Back alignment and structure |
|---|
Score = 153 bits (389), Expect = 2e-42
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNILSDAERRK 696
+ Y LGV +TAS +EIR+ +K+L ++ HPDKN N+P A FL++ AY +L D + RK
Sbjct: 3 NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK 62
Query: 697 QYDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFE 756
+YD +G G Y + + F ++ +I +
Sbjct: 63 KYDKYG-EKGLEDN-------QGGQYESWSY-YRYDFGIYDDDPEIITLERREFDAAVNS 113
Query: 757 KNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVH 805
+ FYS C C + P +++ E+ L + V+
Sbjct: 114 G--------ELWFVNFYSPGCSHCHDLAPTWREFAKEVDGL-LRIGAVN 153
|
| >3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210 | Back alignment and structure |
|---|
Score = 98.8 bits (246), Expect = 3e-23
Identities = 26/162 (16%), Positives = 51/162 (31%), Gaps = 19/162 (11%)
Query: 806 YDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEK 865
YD +G G Y + + F ++ +I +
Sbjct: 64 YDKYGE-KGLEDN-------QGGQYESWSY-YRYDFGIYDDDPEIITLERREFDAAVNSG 114
Query: 866 NYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLG 925
+ FYS C C + P +++ E+ L + V+ +++ L R G
Sbjct: 115 --------ELWFVNFYSPGCSHCHDLAPTWREFAKEVDGL-LRIGAVNCGDDRMLCRMKG 165
Query: 926 VGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLI 967
V S P + + G + S + +V F + +
Sbjct: 166 VNS-YPSLFIFRSGMAAVKYNGDRSKESLVAFAMQHVRSTVT 206
|
| >3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 7e-30
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697
D Y LGV T L+ I+ Y+RL ++HPD + + A+ KF L EA+ +L D +RR +
Sbjct: 29 DYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAE 88
Query: 698 YDLFGTTDGFSGQDSASRNFHNHMYNP-FDDVFSEGF 733
YD G + FDD+FS F
Sbjct: 89 YDQLWQHRNDPGFGRQRQTHEQSYSQQDFDDIFSSMF 125
|
| >3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780 | Back alignment and structure |
|---|
Score = 123 bits (309), Expect = 2e-28
Identities = 67/449 (14%), Positives = 129/449 (28%), Gaps = 71/449 (15%)
Query: 630 FINCAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNI 688
I + Y LGV +TAS +EIR+ +K+L ++ HPDKN N+P A FL++ AY +
Sbjct: 14 HIEGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEV 73
Query: 689 LSDAERRKQYDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKL 748
L D + RK+YD +G Q ++ + Y+ + +
Sbjct: 74 LKDEDLRKKYDKYGEKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERREFDAAVNS- 132
Query: 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL 808
+ FYS + P +++ E+ L
Sbjct: 133 ----------------GELWFVNFYSPGSSHSHDLAPTWREFAKEVDGLLR--------- 167
Query: 809 FGTTDGFSGQDSASRN----------FHNHMYNPFDDVFSEGFNFPFEEHDISLF----- 853
G + + F + + + +N + + F
Sbjct: 168 IGAVNCGDDRMLCRMKGVNSYPSLFIFRS-------GMAAVKYNGDRSKESLVAFAMQHV 220
Query: 854 ----HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG-VG 908
+LST NF + + +C +L G V
Sbjct: 221 RSTVTELSTG--NFVNA---IETAFAAGVGWLITFCSKGEDCLTSQTRLRLSGMLDGLVN 275
Query: 909 FFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIV 968
V + L + L + + ++ S ++ + + +
Sbjct: 276 VGWVDCDAQDSLCKSLDT-TASTTAYFPPGATLNDREKSSVLFLNSLDAKEIYMEIIHNL 334
Query: 969 PLSATNVDAFLDNWREDNKVHALLF-----QRSLPVRLRYLINAFKHRTTIVFGVIVYDQ 1023
P L++ ++ + P + I D
Sbjct: 335 PDFELLSANQLEDRLAHHRWLVFFHFGKNENANDPELKKLK--TLLKNEHIQVVRF--DC 390
Query: 1024 EDSSSVFQRFKVPGDKDSLLIFKEDKDRP 1052
+ + V + SL +FK +
Sbjct: 391 SSAPGICSDLYV--FQPSLAVFKGQGTKE 417
|
| >3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780 | Back alignment and structure |
|---|
Score = 88.7 bits (219), Expect = 9e-18
Identities = 52/359 (14%), Positives = 113/359 (31%), Gaps = 49/359 (13%)
Query: 721 MYNPFDDVFSEGFNFPFEEHDISLF--HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCF 778
++ E + +DI F +++ P S P L+ F++ W
Sbjct: 409 VFKGQGTKEYEIHHGKKILYDILAFAKESVNSHVTTLGPQNFPASDKEPWLVDFFAPWSP 468
Query: 779 ACLQVEPIFKKLMDELSPLGVGFFTVHYDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFS 838
+ P +K L + T+ T + + P VF+
Sbjct: 469 PSRALLPELRKASTLLYG-QLKVGTLD----CTIHEGLCNMYNIQAY------PTTVVFN 517
Query: 839 EGFNFPFEEH----DISLFHK-------LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFA 887
+ +E H I F + +S T F + + + ++ FYS W
Sbjct: 518 QSSIHEYEGHHSAEQILEFIEDLRNPSVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHP 577
Query: 888 CLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEP 947
+ P +K++ L+ L + +V + V + P+I + ++
Sbjct: 578 SQVLMPEWKRMARTLTGL-INVGSVDCGQYHSFCTQENV-QRYPEIRFYPQKSSKAYQYH 635
Query: 948 SF-----SVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLF--------Q 994
S+ + + LP + + L+ F + + + F Q
Sbjct: 636 SYNGWNRDAYSLRSWGLGFLP-QASIDLTPQT---FNEKVLQGKTHWVVDFYAPWSGPSQ 691
Query: 995 RSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPS 1053
P L K + + G + D + Q+ + S+ +++ ++ + S
Sbjct: 692 NFAPE-FELLARMIKGK--VRAGKV--DCQAYPQTCQKAGIKA-YPSVKLYQYERAKKS 744
|
| >3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780 | Back alignment and structure |
|---|
Score = 87.1 bits (215), Expect = 3e-17
Identities = 35/315 (11%), Positives = 87/315 (27%), Gaps = 12/315 (3%)
Query: 823 RNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEKNYIPKSYTT--PHLILF 880
+ + + +D + + E+ + + + F
Sbjct: 81 KKYDKYGEKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERREFDAAVNSGELWFVNF 140
Query: 881 YSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGR 940
YS + P +++ E+ L + V+ +++ L R GV S P + + G
Sbjct: 141 YSPGSSHSHDLAPTWREFAKEVDGL-LRIGAVNCGDDRMLCRMKGVNS-YPSLFIFRSGM 198
Query: 941 TSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLF---QRSL 997
+ S + +V F + + LS N ++ + F
Sbjct: 199 AAVKYNGDRSKESLVAFAMQHVR-STVTELSTGNFVNAIETAFAAGVGWLITFCSKGEDC 257
Query: 998 PVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASIT 1057
L + + G + D + S+ + + + S
Sbjct: 258 LTSQTRLRLSGMLDGLVNVGWV--DCDAQDSLCKSLDTTASTTAYFPPGATLNDREKSSV 315
Query: 1058 MNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVKKLCVVLFSEDSPEHDASRHTLRR 1117
+ + + + L + S + L+ + V +A+ L++
Sbjct: 316 LFLNSLDAKEIYMEIIHNLPDFELLSANQLEDRLAHHRWLVFFHFGK--NENANDPELKK 373
Query: 1118 FAQESRFVHNNIAFM 1132
+ H +
Sbjct: 374 LKTLLKNEHIQVVRF 388
|
| >2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 2e-27
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697
DPY LGV RTAS +I+K YK+L EWHPDKN DP A+++F+Q+++AY ILS+ E+R
Sbjct: 18 DPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTN 77
Query: 698 YDLFGTTDGFSG 709
YD +G + SG
Sbjct: 78 YDHYG-SGPSSG 88
|
| >1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77 | Back alignment and structure |
|---|
Score = 104 bits (263), Expect = 4e-27
Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697
D Y+TLG+ R AS +EI++ Y+R + +HPDKN +P A+EKF ++ EAY++LSD +R+
Sbjct: 4 DYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREI 63
Query: 698 YDLFGTTDGFSGQ 710
+D +G +G G
Sbjct: 64 FDRYG-EEGLKGS 75
|
| >2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 2e-26
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697
D YE LGV R AS ++++K Y+RL +++HPDKN+ P A E F + AY +LS+ E+RKQ
Sbjct: 8 DYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQ 67
Query: 698 YDLFGTTDGFSG 709
YD FG + SG
Sbjct: 68 YDQFG-SGPSSG 78
|
| >1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 3e-26
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNILSDAERRK 696
D YE LGV +TA +EIRK YKRL +++HPD+N D A+ KF ++ EAY +L+D+++R
Sbjct: 4 DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRA 63
Query: 697 QYDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEGF 733
YD +G F F F D+F + F
Sbjct: 64 AYDQYG-HAAFEQGGMGGGGFGGGA--DFSDIFGDVF 97
|
| >2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 5e-26
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN--NDPTAQEKFLQLTEAYNILSDAERR 695
YE L VPR+AS +I+K Y+R ++WHPDKN N A++KF ++ EAY +LSD +R
Sbjct: 3 SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKR 62
Query: 696 KQYDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEGFNFPFEEH 740
+ YD +G +G +G + P G H
Sbjct: 63 EIYDRYG-REGLTGTGTGPSRAEAGSGGP-------GLEHHHHHH 99
|
| >2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 6e-26
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNILSDAERRK 696
Y LG+ + A+ +I+K+Y++L +++HPDKN ++P A +KF ++ A+ IL+DA +R
Sbjct: 18 SLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRN 77
Query: 697 QYDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEG 732
YD +G + G + + F G
Sbjct: 78 IYDKYG-SLGLYVAEQFG-------EENVNTYFVSG 105
|
| >2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 7e-26
Identities = 40/73 (54%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNILSDAERRK 696
D Y+ LGVPR AS +EI+K Y +L ++HPD N +DP A+EKF QL EAY +LSD +RK
Sbjct: 8 DYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRK 67
Query: 697 QYDLFGTTDGFSG 709
QYD +G + SG
Sbjct: 68 QYDAYG-SGPSSG 79
|
| >2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 2e-25
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNILSDAERRK 696
Y+ LGVP TA+ +I+ Y R +HPD+N A E+F ++++AY +L A R+
Sbjct: 18 ALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRR 77
Query: 697 QYDLFGTTDGFSGQDSASRNF 717
+YD + S
Sbjct: 78 KYDRGL-LSDEDLRGPGSGPS 97
|
| >2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 2e-25
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNILSDAERRK 696
D Y LG +S+++I +K +E HPDK+ +P A E F +L +A IL++ E R
Sbjct: 21 DYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRA 80
Query: 697 QYDLFG---TTDGFSGQDSASRNFHN 719
+YD + + F ++ + +
Sbjct: 81 RYDHWRRSQMSMPFQQWEALNDSVKT 106
|
| >2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 2e-25
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697
Y+ LGVP++AS ++I+K + +L +++HPDKN P A+ KF ++ EAY LSDA RRK+
Sbjct: 8 SYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKE 67
Query: 698 YDLFG 702
YD G
Sbjct: 68 YDTLG 72
|
| >2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 2e-25
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN--NDPTAQEKFLQLTEAYNILSDAERR 695
D YE L VPR AS + I+K Y++L ++WHPDKN N A+ +F Q+ EAY +LSDA++R
Sbjct: 10 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKR 69
Query: 696 KQYDLFGTTDGFSG 709
YD +G + SG
Sbjct: 70 DIYDRYG-SGPSSG 82
|
| >2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 2e-25
Identities = 22/108 (20%), Positives = 49/108 (45%), Gaps = 13/108 (12%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPT-------AQEKFLQLTEAYNILS 690
D Y LG +A++ ++++ Y++L++ +HPDK + +KF+++ +A+ IL
Sbjct: 11 DWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILG 70
Query: 691 DAERRKQYDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEGFNFPFE 738
+ E +++YDL D +++ + F
Sbjct: 71 NEETKREYDLQRCEDDLRNVGPVDAQV------YLEEMSWNEGDHSFY 112
|
| >2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 7e-25
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN--NDPTAQEKFLQLTEAYNILSDAERR 695
+ YE LGV +AS ++I+K Y++L + WHPDKN N A++KF ++EAY +LSD+++R
Sbjct: 10 NYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKR 69
Query: 696 KQYDLFGTTDGFSGQDSAS 714
YD G D + AS
Sbjct: 70 SLYDRAG-CDSWRAGGGAS 87
|
| >1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94 | Back alignment and structure |
|---|
Score = 94.8 bits (236), Expect = 2e-23
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 8/79 (10%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND-------PTAQEKFLQLTEAYNILS 690
D Y LG +A++ ++++ Y++L++ +HPDK + +KF+++ +A+ IL
Sbjct: 17 DWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILG 76
Query: 691 DAERRKQYDLFGTTDGFSG 709
+ E +K+YDL + SG
Sbjct: 77 NEETKKKYDLQR-SGPSSG 94
|
| >2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 2e-23
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697
Y+ LGV AS E++K Y+++ +++HPDKN P E+F Q+++AY +LSD ++R+
Sbjct: 9 GYYDVLGVKPDASDNELKKAYRKMALKFHPDKN--PDGAEQFKQISQAYEVLSDEKKRQI 66
Query: 698 YDLFG 702
YD G
Sbjct: 67 YDQGG 71
|
| >2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 5e-23
Identities = 25/65 (38%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697
Y+ LGV +A+ QE++K Y++ +++HPDK EKF +++EA+ IL+D ++R+
Sbjct: 9 KLYDLLGVSPSANEQELKKGYRKAALKYHPDKP--TGDTEKFKEISEAFEILNDPQKREI 66
Query: 698 YDLFG 702
YD +G
Sbjct: 67 YDQYG 71
|
| >2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 3e-22
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697
D ++ LGV AS E+ K Y++L V HPDK P +++ F + A L +
Sbjct: 28 DSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87
Query: 698 YD 699
Sbjct: 88 SS 89
|
| >2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109 | Back alignment and structure |
|---|
Score = 92.1 bits (229), Expect = 3e-22
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Query: 638 DPYETLGVPRTA-SLQEIRKNYKRLVVEWHPDKNNDP----TAQEKFLQLTEAYNILSDA 692
+ Y+ L V R Q++ K Y+ L + HPD+ + A+E+F + AY L D
Sbjct: 16 NCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDD 75
Query: 693 ERRKQYDLFGTTDGFSGQDSASRNFHNHMYNPFDDV 728
E + YD + + + + P D+
Sbjct: 76 EAKTNYDYYL-DHPDQRFYNYYQYYRLRA-APKVDL 109
|
| >1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114 | Back alignment and structure |
|---|
Score = 92.2 bits (229), Expect = 3e-22
Identities = 22/108 (20%), Positives = 43/108 (39%), Gaps = 7/108 (6%)
Query: 638 DPYETLGVPRTA--SLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERR 695
+ LG+ R+A ++ +RK Y + E+HPDK D EK ++ Y + D +
Sbjct: 9 QLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE---EKMKKMNTLYKKMEDGVKY 65
Query: 696 KQYDLFGTTDGFSGQDSASRNFHNHMYNPF--DDVFSEGFNFPFEEHD 741
FG + + + +N F +++F ++
Sbjct: 66 AHQPDFGGFWDATEIPTYGTDEWEQWWNAFNEENLFCSEEMPSSDDEA 113
|
| >2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174 | Back alignment and structure |
|---|
Score = 94.2 bits (234), Expect = 4e-22
Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 14/127 (11%)
Query: 638 DPYETLGVPRTA--SLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERR 695
+ LG+ R+A ++ +RK Y + E+HPDK D EK ++ Y + D +
Sbjct: 12 QLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE---EKMKKMNTLYKKMEDGVKY 68
Query: 696 KQYDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEGFNFPFEEHDIS---LFHKLSTTH 752
FG + ++S N D ++ + + ++ + L L H
Sbjct: 69 AHQPDFGGFWDATEVFASSLNPG------VDAIYCKQWPECVKKMSTNCICLLCLLRMKH 122
Query: 753 WNFEKNY 759
N +
Sbjct: 123 ENRKLYR 129
|
| >1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 3e-19
Identities = 19/75 (25%), Positives = 27/75 (36%), Gaps = 6/75 (8%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN--NDPTAQEKFLQLTEAYNILSDAERR 695
+ + E +K +RL ++WHPDKN N A E F L N L E++
Sbjct: 17 EVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRL---EKQ 73
Query: 696 KQYDLFGTTDGFSGQ 710
D
Sbjct: 74 AFLDQNA-DRASRRT 87
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 84.9 bits (209), Expect = 2e-16
Identities = 113/783 (14%), Positives = 236/783 (30%), Gaps = 257/783 (32%)
Query: 233 HEFHEATNERPEFSASQQRRRSSYTVAVISFDYWWSLRDID----ED-------SEYYPS 281
H H +F + + + ++V + + + D +D E
Sbjct: 2 HHHHHM-----DFETGEHQYQYKDILSVFEDAF---VDNFDCKDVQDMPKSILSKEEIDH 53
Query: 282 ILASVHQRSANRILSMCLTNGGLYIKLGQGMVS--LDHVLPRQYPHTLRALQDKCLLREK 339
I+ S S L L + + MV ++ VL Y + ++ + R+
Sbjct: 54 IIMSKDAVSGTLRLFWTLLSKQ------EEMVQKFVEEVLRINYKFLMSPIKTEQ--RQP 105
Query: 340 GEVDQLFLEDFGCTHSQLFRS---FDENPIAAASLAQALQDKCLLREKGEVDQLFLE-DF 395
+ ++++E +L+ F + ++ L+ + LL + + ++
Sbjct: 106 SMMTRMYIE----QRDRLYNDNQVFAKYNVSRLQPYLKLR-QALLELRPA-KNVLIDGVL 159
Query: 396 GCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLR 455
G + + A + ++ K ++ +++ + + + +T+L
Sbjct: 160 GSGKTWV----------ALDVCLSYKVQCKMDFKIF----WLN-----LKNCNSPETVLE 200
Query: 456 IAGFLYPKFDFQWVIN-ELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSS 514
+ L + D W + ++ + + + L PY
Sbjct: 201 MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA-----ELRRLLKSKPY------------ 243
Query: 515 TRVLTTEFIDGVKISDKEGLLEKGFSLADV-DRKLFTAFAEQIFQTGFVHADPHSGNDVN 573
+ LL L +V + K + AF
Sbjct: 244 ----------------ENCLL----VLLNVQNAKAWNAF--------------------- 262
Query: 574 TWLYPVDLGDKFRLVLATTLREDGYPDSGEWNPLEESPRMNFNLIMLWYTF----LLNVL 629
+L K +L TT R + L + + +L T + ++L
Sbjct: 263 ------NLSCK---ILLTT-R-----FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL 307
Query: 630 --FINCAVSLDPYETLGV-PRTASL--QEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTE 684
+++C P E L PR S+ + IR W K+ + ++ +
Sbjct: 308 LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT----WDNWKHVNCDKLTTIIESS- 362
Query: 685 AYNILSDAERRKQYDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEGFNFP-------- 736
N+L AE RK +D VF + P
Sbjct: 363 -LNVLEPAEYRKMFDRLS-------------------------VFPPSAHIPTILLSLIW 396
Query: 737 ------FEEHDISLFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKL 790
++ HK S EK + + P + Y + + + +
Sbjct: 397 FDVIKSDVMVVVNKLHKYSL----VEKQPKESTISIPSI---YLELKVKLENEYALHRSI 449
Query: 791 MDELSPLGVGFFTVHYDLFGTTDGFSGQDSASRN-FHN----HMYNP----FDDVFSEGF 841
+D HY++ T D F++ H+ N +F F
Sbjct: 450 VD------------HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVF 497
Query: 842 -NFPFEEHDISLFHKLSTTHWNFE----------KNYIPKSYTTPHLILFYSDWCFACLQ 890
+F F E I + +T WN K Y K Y +
Sbjct: 498 LDFRFLEQKI----RHDSTAWNASGSILNTLQQLKFY--KPYICDN-------------- 537
Query: 891 VEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFS 950
+P +++L++ + + F + E + + + L +IAL+ + + F+E
Sbjct: 538 -DPKYERLVNAI----LDF--LPKIEENLICSKY---TDLLRIALMAED-EAIFEEAHKQ 586
Query: 951 VQK 953
VQ+
Sbjct: 587 VQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 71.4 bits (174), Expect = 2e-12
Identities = 104/651 (15%), Positives = 194/651 (29%), Gaps = 181/651 (27%)
Query: 826 HNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWC 885
H + Y VF + F F+ D+ K + + + K + L LF W
Sbjct: 14 HQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLF---WT 70
Query: 886 FACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFK 945
+ E + +K ++E+ + F + EQ +
Sbjct: 71 L-LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQ--------------------------R 103
Query: 946 EPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI 1005
+PS + +E R +L Y + NV R L +++L + LR
Sbjct: 104 QPSMMTRMYIEQ-RDRL-YNDNQVFAKYNV------SRLQ-PYLKL--RQAL-LELR--- 148
Query: 1006 NAFKHRTTIVFG-------VIVYDQEDSSSVFQRF----------KVPGDKDSL-----L 1043
+ ++ G + D S V + + L L
Sbjct: 149 ---PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL 205
Query: 1044 IFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSM--LDAVCPVKKL----- 1096
+++ D + S S ++I + + I L + + L V K
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLR-IHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL 264
Query: 1097 -CVVLF-SEDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPE--FVNAL-TSPED 1151
C +L + D H+++ + + + L P+D
Sbjct: 265 SCKILLTTRFKQVTDFLSAATTT---HISLDHHSMTLT----PDEVKSLLLKYLDCRPQD 317
Query: 1152 SSE---------ISLHIAAMWRMDYKKIKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVN 1202
+S+ IA R WK N D+L + S +N
Sbjct: 318 LPREVLTTNPRRLSI-IAESIRDGLATWDN----------WKHVN--CDKLTTIIESSLN 364
Query: 1203 --DPYNNLLYDTALKEISDEYIQSLGVRIFNRIFMHIEMAQQSLSRQHILPAV-SLIFTV 1259
+P E + L +F S HI + SLI+
Sbjct: 365 VLEPA----------EYRKMF-DRLS------VF------PPSA---HIPTILLSLIWFD 398
Query: 1260 IIIVVLAMIMNHYMK--LEEEEIPSTTSSMRNHSVNKEKKHKETKQELKLHALRAETYNG 1317
+I + +++N K L E++ +T S+ S+ E K K + E LH + YN
Sbjct: 399 VIKSDVMVVVNKLHKYSLVEKQPKESTISI--PSIYLELKVK-LENEYALHRSIVDHYNI 455
Query: 1318 LVVLLKPGCRTLILFIDNKSSRKLVSKFHAMVWPYRKNKSLMFGYL-----NIERKQSRE 1372
+ ++D Y + ++ NIE +
Sbjct: 456 PKTFDSDDL--IPPYLDQ----------------Y------FYSHIGHHLKNIEHPERMT 491
Query: 1373 WFKDILLE------ALPPDTPLAINPRNCIGTVLSINGYRKYFCMYHAKLT 1417
F+ + L+ + D+ + + T+ + Y+ Y C K
Sbjct: 492 LFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYE 542
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 71.4 bits (174), Expect = 2e-12
Identities = 107/683 (15%), Positives = 196/683 (28%), Gaps = 207/683 (30%)
Query: 956 EFFRLKLPYKLIVPLSATNVDAFLDNWR----ED--------NKVHALLFQRSLPVRLRY 1003
E + YK I+ + DAF+DN+ +D ++ ++ +
Sbjct: 10 ETGEHQYQYKDILSV---FEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR 66
Query: 1004 LINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS---LL--IFKEDKDRPSASITM 1058
L F ++ QE + Q+F + + L+ I E + PS M
Sbjct: 67 L-----------FWTLLSKQE---EMVQKFVEEVLRINYKFLMSPIKTEQRQ-PSMMTRM 111
Query: 1059 NSIPVPTLQDITDNNPY--LTLPRISSQSMLDAVCPVKKLCVVLFSEDSPEHDASRH--- 1113
L DN + + R+ P KL L E P +
Sbjct: 112 YIEQRDRLY--NDNQVFAKYNVSRLQ---------PYLKLRQALL-ELRPAKNVLIDGVL 159
Query: 1114 ----------TLRRFAQESRFVHNNIAFMYVFIEKQPEFV-------------NALTSPE 1150
+ + + I ++ + PE V N + +
Sbjct: 160 GSGKTWVALDVCLSYKVQCKM-DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218
Query: 1151 DSSEISLHIAA--------MWRMDYKKIKYGWLLGDAVDD------WKDYN-------TT 1189
SS I L I + + Y+ LL + + W +N TT
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENC----LL--VLLNVQNAKAWNAFNLSCKILLTT 272
Query: 1190 KDRLDAGLRSLVNDPYNNLLYDTALKEISDEYIQSLGVRIFNRIFMHIEMAQQSLSRQ-- 1247
+ + + + +L S + + ++ Q L R+
Sbjct: 273 RFK------QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY---LDCRPQDLPREVL 323
Query: 1248 HILP-AVSLIFTVIIIVVLAMIMNHYMKLEEEEIPSTTSSMRNHSVNKEKKHKETKQELK 1306
P +S+I I + +T + ++ VN +K T E
Sbjct: 324 TTNPRRLSII--------AESIRDG---------LATWDNWKH--VNCDKL--TTIIESS 362
Query: 1307 LHALRA----ETYNGLVVLLK----PGCRTL-ILFIDNKSS--RKLVSKFHAMVWPYRKN 1355
L+ L + ++ L V P L +++ D S +V+K H
Sbjct: 363 LNVLEPAEYRKMFDRLSVFPPSAHIPT-ILLSLIWFDVIKSDVMVVVNKLH--------K 413
Query: 1356 KSLMFGYLNIERKQSREWFKDILLEALPPDTPLAINPRNCIGTVLSINGYRKYFCMYHAK 1415
SL + + K+S I LE R+ + + Y
Sbjct: 414 YSL----VEKQPKESTISIPSIYLELKVKLENEYALHRSIV------DHYNIPKTFDSDD 463
Query: 1416 LTGQYGSKSKDNTIKGKGLGAYLGYNDSDYSDTDEEADLERGLHKHKAEPPPEY-LLEDK 1474
L Y D +++G+ H E P L
Sbjct: 464 LIPPY----LDQYFY-----SHIGH------------------HLKNIEHPERMTLFRMV 496
Query: 1475 LLDGFPNWLDRLFEGTTPRFYVEAWPTNYLMVFPTVLIRKGQDKKAELVILD-HGLYEEV 1533
LD F +L++ + + N L K + I D YE +
Sbjct: 497 FLD-F-RFLEQKIRHDSTAWNASGSILNTLQQL----------KFYKPYICDNDPKYERL 544
Query: 1534 PSDIRESLCSLWKAIALNNHTDM 1556
+ I + L + + + + +TD+
Sbjct: 545 VNAILDFLPKIEENLICSKYTDL 567
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 68.7 bits (167), Expect = 1e-11
Identities = 96/640 (15%), Positives = 173/640 (27%), Gaps = 166/640 (25%)
Query: 145 FLEDFGCTHSQLFRSFDENPIAAASLAQSMVTDEALGIK--------LHEFHEATNERPD 196
F+++F C Q D S+ D + K L + E
Sbjct: 29 FVDNFDCKDVQ-----DM----PKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMV 79
Query: 197 HEFHEATNERPDHEF-----HEATNER--PDHEFHEATNE--RPDHEFHEATNERPEF-- 245
+F E R +++F + + E + + F + R +
Sbjct: 80 QKFVE-EVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYL 138
Query: 246 ---SASQQRRRSSY-----------TVAVISFDYWWSLRDIDEDSEYYPSI--LASVHQR 289
A + R + T + + I L +
Sbjct: 139 KLRQALLELRPAKNVLIDGVLGSGKTWVALD-----VCLSYKVQCKMDFKIFWLNLKNCN 193
Query: 290 SANRILSMCLTNGGLYIKLGQGMVSL-DHVLPRQYPHTLRALQDK------------CLL 336
S +L M L L ++ S DH + ++Q + CLL
Sbjct: 194 SPETVLEM-LQK--LLYQIDPNWTSRSDH--SSNIKLRIHSIQAELRRLLKSKPYENCLL 248
Query: 337 -----REKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQ----ALQDKCLLREKGEV 387
+ + F + C L + + S A +L + EV
Sbjct: 249 VLLNVQNAKAWN-AF--NLSCK--ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV 303
Query: 388 DQLFLEDFGCTHSQLFRS-FDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGD 446
L L+ C L R NP + +A ++G
Sbjct: 304 KSLLLKYLDCRPQDLPREVLTTNPRRLSIIA----ESIRDG------------------- 340
Query: 447 IATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPY-VYI 505
L + + D +L +E L+ L + L+ P +I
Sbjct: 341 ------LATWDNWKHVNCD------KLTTIIESSLNVLEPA-EYRKMFDRLSVFPPSAHI 387
Query: 506 PR----ILWDKSSTRVLTTEFIDGVKISDKEGLLEKG-----FSLADVDRKLFTAFAEQI 556
P ++W + V K L+EK S+ + +L ++
Sbjct: 388 PTILLSLIWFDVIKSD--VMVV--VNKLHKYSLVEKQPKESTISIPSIYLEL----KVKL 439
Query: 557 FQTGFVHADPHSGNDVNTWLYPVDLGDKFRLVLATTLREDGYPDSGEW--------NPLE 608
+H + V+ Y ++ F D Y + +E
Sbjct: 440 ENEYALHR-----SIVDH--Y--NIPKTFDSDDLIPPYLDQY-----FYSHIGHHLKNIE 485
Query: 609 ESPRMN-FNLIMLWYTFLLNVLFINCAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHP 667
RM F ++ L + FL + S + + T LQ+++ YK + + P
Sbjct: 486 HPERMTLFRMVFLDFRFLEQKI---RHDSTAWNASGSILNT--LQQLKF-YKPYICDNDP 539
Query: 668 DKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGF 707
A FL E I S + L +
Sbjct: 540 KYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAI 579
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.8 bits (149), Expect = 2e-09
Identities = 67/497 (13%), Positives = 132/497 (26%), Gaps = 168/497 (33%)
Query: 1136 IEKQPEFVNALTSPEDSSEISL----------HIAAMWRMDYKKIKYGWLLG-------D 1178
I + E + + S + S + + + +I Y +L+
Sbjct: 45 ILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQ 104
Query: 1179 AVDDWKDYNTTKDRLDAGLRSL----VN--DPYNNLLYDTALKEISDEYIQSLGVRIFNR 1232
+ Y +DRL + V+ PY L AL E+
Sbjct: 105 PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL--RQALLELRPA----------KN 152
Query: 1233 IFMH----------IEMAQQSLSRQHILPA----VSLIFTVIIIVVLAMIMNHYMKLEEE 1278
+ + S Q + ++L VL M+ +++
Sbjct: 153 VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN 212
Query: 1279 EIPSTTSSMRNHSVNKEKKHKETKQELKLHALRAETY-NGLVVL-----------LKPGC 1326
+S +HS N + + + EL+ L+++ Y N L+VL C
Sbjct: 213 -----WTSRSDHSSNIKLRIHSIQAELR-RLLKSKPYENCLLVLLNVQNAKAWNAFNLSC 266
Query: 1327 RTLILFIDNKSSRKLVSKFHAMVWPYRKNKSLMFGYLNIERKQSREWFKDIL---LEALP 1383
+ L+ + + L + + SL + + + + L + LP
Sbjct: 267 KILLTTRFKQVTDFLSAA-------TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP 319
Query: 1384 PDTPLAINPRNC--IGTVLSINGYR-KYFCMYHAKLTGQYGSKSKDNTIKGKGLGAYLGY 1440
+ L NPR I + + I
Sbjct: 320 REV-LTTNPRRLSIIAESIRDGLATWDNW--------KHVNCDKLTTII----------- 359
Query: 1441 NDSDYSDTDEEADLERGLHKHKAEPPPEYLLEDKLLDGFPNWLDRLFEGTTPRFYVEAWP 1500
E+ L P EY ++F+
Sbjct: 360 ----------ESSLN-------VLEPAEYR--------------KMFD------------ 376
Query: 1501 TNYLMVFPTVLIRKGQDKKAELVILDHGLYEEVPSDIRESLCSLWKAIALNNHTDMRTYS 1560
L VFP +P+ + L +W + ++ +
Sbjct: 377 --RLSVFP-------PSAH-------------IPTIL---LSLIWFDVIKSDVMVVVNKL 411
Query: 1561 KRLGVSEKDYRLFSIAI 1577
+ + EK + +I+I
Sbjct: 412 HKYSLVEKQPKESTISI 428
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.2 bits (119), Expect = 6e-06
Identities = 70/561 (12%), Positives = 166/561 (29%), Gaps = 166/561 (29%)
Query: 32 LNKQRQRSVITH-LGGI-KRFIRSSYTVAVIS-------FD---YWWSLRDIDEDSEYYP 79
L + ++V+ + G K + + V D +W +L++ +
Sbjct: 145 LELRPAKNVLIDGVLGSGK----TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETV-L 199
Query: 80 SILASVHQRSANRILSMCLTNGGLYIKLGQGMVSLDHVLP-RQYPHTLRALQDKCLLREK 138
+L + + S + + +++ L +L + Y + L L + ++
Sbjct: 200 EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN---VQNA 256
Query: 139 GEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQSMVTDEALGIKLHEFHEATNERPDHE 198
+ F + C L + + VTD L
Sbjct: 257 KAWN-AF--NLSCK--ILLTTRFKQ-----------VTD-FLS-------------AATT 286
Query: 199 FHEATNERPDHEFHEATNERPDHEFHEATNERPDHEFHEATNERPEFSASQQRRRSSYTV 258
H + + + + + RP E P +
Sbjct: 287 THISLDHHSM-TLTPDEVKS---LLLKYLDCRPQDLPREVLTTNP------------RRL 330
Query: 259 AVISFDYWWSLRDIDEDSEYYPSILASVHQRSANRILSMCLTN------GGLYIKLGQGM 312
++I S+RD + + + I+ L ++ +L
Sbjct: 331 SII----AESIRDGLATWDNWKHVNCDKL----TTIIESSLNVLEPAEYRKMFDRLS--- 379
Query: 313 VSLDHVLPRQYPHTLRALQDKCLL--REKGEVDQLFLEDFGCTHSQLFRSFDENPIAAAS 370
V P L L+ + + +S + + E+ I+ S
Sbjct: 380 -----VFPPSAHIPTILL---SLIWFDVIKSDVMVVVNKL-HKYSLVEKQPKESTISIPS 430
Query: 371 LAQALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEV 430
+ L+ K + + + ++ H + ++FD + + L Q F
Sbjct: 431 IYLELKVKL--ENEYALHRSIVD-----HYNIPKTFDSDDLIPPYLDQYF---------- 473
Query: 431 AVKVQYI-------DLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELK--------- 474
+I + ER TL R+ ++ DF+++ +++
Sbjct: 474 ---YSHIGHHLKNIEHPERM--------TLFRM---VF--LDFRFLEQKIRHDSTAWNAS 517
Query: 475 ---VPLEQELDF------LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDG 525
+ Q+L F N+ + ER + ++P+I ++ +++ D
Sbjct: 518 GSILNTLQQLKFYKPYICDNDPKY-ERLVNAILD----FLPKI-----EENLICSKYTDL 567
Query: 526 VKIS---DKEGLLEKGFSLAD 543
++I+ + E + E+
Sbjct: 568 LRIALMAEDEAIFEEAHKQVQ 588
|
| >1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79 | Back alignment and structure |
|---|
Score = 70.0 bits (171), Expect = 8e-15
Identities = 14/72 (19%), Positives = 24/72 (33%), Gaps = 5/72 (6%)
Query: 636 SLDPYETLGVPRTA--SLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAE 693
E L +PR +++ YK+ + HPDK +L +
Sbjct: 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSH---ALMQELNSLWGTFKTEV 66
Query: 694 RRKQYDLFGTTD 705
+ +L GT
Sbjct: 67 YNLRMNLGGTGF 78
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 73.6 bits (181), Expect = 2e-13
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPT----AQEKFLQLTEAYNILSDAE 693
D Y+ LGV R A QEI K Y++L ++WHPD + A++KF+ + A +LSD E
Sbjct: 383 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPE 442
Query: 694 RRKQYD 699
RK++D
Sbjct: 443 MRKKFD 448
|
| >1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171 | Back alignment and structure |
|---|
Score = 64.2 bits (156), Expect = 1e-11
Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Query: 637 LDPYETLGVPRTASL--QEIRKNYKRLVVEWHPDKNNDPTAQEK------FLQLTEAYNI 688
+D + G+P L Q + ++ L ++HPDK + E+ + +A+
Sbjct: 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQT 60
Query: 689 LSDAERRKQYDL 700
L R +Y L
Sbjct: 61 LRHPLMRAEYLL 72
|
| >2f3i_A DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide; RNA polymerase II, transferase; NMR {Homo sapiens} Length = 150 | Back alignment and structure |
|---|
Score = 63.0 bits (153), Expect = 2e-11
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 10/83 (12%)
Query: 534 LLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHSGN-----DVNTWLYPVDLGDKFRLV 588
L E F + D+D + ++ + +H + S DVN +YPVDLGDKFRLV
Sbjct: 5 LFEDIFDVKDIDPE-----GKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLV 59
Query: 589 LATTLREDGYPDSGEWNPLEESP 611
+A+TL EDG D GE+NP ++ P
Sbjct: 60 IASTLYEDGTLDDGEYNPTDDRP 82
|
| >1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182 | Back alignment and structure |
|---|
Score = 61.0 bits (147), Expect = 1e-10
Identities = 13/63 (20%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 640 YETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPT----AQEKFLQLTEAYNILSDAERR 695
++ +G+ + ++++K Y++ V+ HPDK A+ F++L +A++ + ++
Sbjct: 120 WKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQK 179
Query: 696 KQY 698
Y
Sbjct: 180 PLY 182
|
| >2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A Length = 504 | Back alignment and structure |
|---|
Score = 62.2 bits (150), Expect = 8e-10
Identities = 41/363 (11%), Positives = 91/363 (25%), Gaps = 28/363 (7%)
Query: 877 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALL 936
L F++ WC C + P + K + L + + Q L + P + +
Sbjct: 35 LAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNI-PGFPSLKIF 93
Query: 937 TDGRTSFFKEPSF--SVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQ 994
+ + + + + +V+F + + V A E ++
Sbjct: 94 KNSDVNNSIDYEGPRTAEAIVQFMIKQSQPAVAVVADLPAYLAN-----ETFVTPVIVQS 148
Query: 995 RSLPVRLR--YLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRP 1052
+ + A KH F +D + K D
Sbjct: 149 GKIDADFNATFYSMANKHFNDYDFVSAENADDDFKLSIYLPSAMDEPVVYNGKKADIA-- 206
Query: 1053 SASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVKKLCVVLFSEDSPEHDASR 1112
+ I LF D E + +
Sbjct: 207 ---------DADVFEKWLQVEALPYFGEIDGSV-FAQYVESGLPLGYLFYNDEEELEEYK 256
Query: 1113 HTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKKIKY 1172
A+++R + F+ + K L E ++H D K
Sbjct: 257 PLFTELAKKNR---GLMNFVSIDARKFGRHAGNLNMKEQFPLFAIHD---MTEDLKYGLP 310
Query: 1173 GWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTALKEISDEYIQSLGVRIFNR 1232
+ +++ ++ + + ++ + E D + L + +
Sbjct: 311 QLSEEAFDELSDKIVLESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDE 370
Query: 1233 IFM 1235
I
Sbjct: 371 IVN 373
|
| >2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 1e-09
Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 640 YETLGV-PRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRK 696
+ L + T + +++++ ++++++ HPDK P K + EA + L K
Sbjct: 17 LQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATK---INEAKDFLEKRGISK 71
|
| >3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207 | Back alignment and structure |
|---|
Score = 58.6 bits (141), Expect = 2e-09
Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 8/73 (10%)
Query: 636 SLDPYETLGVPRT--ASLQEIRKNYKRLVVEWHPDKNNDPTAQEK------FLQLTEAYN 687
+ D + + R+ +++ Y++L HPD + + EK + +AY
Sbjct: 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYK 101
Query: 688 ILSDAERRKQYDL 700
L R Y L
Sbjct: 102 TLLAPLSRGLYLL 114
|
| >3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A Length = 481 | Back alignment and structure |
|---|
Score = 59.5 bits (143), Expect = 6e-09
Identities = 35/265 (13%), Positives = 75/265 (28%), Gaps = 18/265 (6%)
Query: 862 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLA 921
NFE L+ F++ WC ++ P ++ L V V
Sbjct: 10 NFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKG-IVPLAKVDCTANTNTC 68
Query: 922 RRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDN 981
+ GV S P + + DG + + + +V + + + + F+
Sbjct: 69 NKYGV-SGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFI-- 125
Query: 982 WREDNKVHALLFQRSL--PVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDK 1039
D + F +L A R F + S+ + G+
Sbjct: 126 --SDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHT-----NVESLVNEYDDNGEG 178
Query: 1040 DSLL---IFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVKKL 1096
L + + + T + ++ N + P ++ + K L
Sbjct: 179 IILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQG--KDL 236
Query: 1097 CVVLFSEDSPEHDASRHTLRRFAQE 1121
+ + D ++ + R
Sbjct: 237 LIAYYDVDYEKNAKGSNYWRNRVMM 261
|
| >1a1d_A RNA polymerase; RPB8, OB fold, eukaryotic, yeast, nucleotidyltransferase; NMR {Saccharomyces cerevisiae} SCOP: b.40.4.8 PDB: 1i3q_H 1i50_H 1i6h_H 1k83_H* 1nik_H 1nt9_H 1pqv_H 1r5u_H 1r9s_H* 1r9t_H* 1sfo_H* 1twa_H* 1twc_H* 1twf_H* 1twg_H* 1twh_H* 1wcm_H 1y1v_H 1y1w_H 1y1y_H ... Length = 146 | Back alignment and structure |
|---|
Score = 55.3 bits (133), Expect = 7e-09
Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 1/78 (1%)
Query: 534 LLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHSGNDVNTWLYPVDLGDKFRLVLATTL 593
L + F +++VD + +I D+N L+PV D + +A++L
Sbjct: 5 LFDDIFQVSEVDPGRYNKVC-RIEAASTTQDQCKLTLDINVELFPVAAQDSLTVTIASSL 63
Query: 594 REDGYPDSGEWNPLEESP 611
+ P + P
Sbjct: 64 NLEDTPANDSSATRSWRP 81
|
| >1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A Length = 350 | Back alignment and structure |
|---|
Score = 58.5 bits (141), Expect = 8e-09
Identities = 50/318 (15%), Positives = 103/318 (32%), Gaps = 21/318 (6%)
Query: 864 EKNYIPKSYTTPHLILFYSDWCFACLQVEPIF-------KKLMDELSPLGVGFFTVHVHN 916
EKN+ L L+Y + + + F + + L +GF V
Sbjct: 18 EKNFKQVLKKYDVLCLYYHESVSSDKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKK 77
Query: 917 EQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVD 976
E LA++LG + + +L RT F F+ +VEF + + + S V
Sbjct: 78 EAKLAKKLGFDEE-GSLYVLKGDRTIEFDGE-FAADVLVEFLLDLIEDPVEIINSKLEVQ 135
Query: 977 AFLDNWREDNKVHALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVP 1036
AF + K+ + A + I F V ++ +
Sbjct: 136 AFERI-EDQIKLIGFFKSEESEYYKAFEEAAEHFQPYIKFFATF-----DKGVAKKLSLK 189
Query: 1037 GDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVC-PVKK 1095
++ + F E +I L + + TL R+ + M + +
Sbjct: 190 MNE---VDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRPTLRRLRPEDMFETWEDDLNG 246
Query: 1096 LCVVLF-SEDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSE 1154
+ +V F P+ L++ A+++ + +++ +++ + P V
Sbjct: 247 IHIVAFAERSDPDGYEFLEILKQVARDNTD-NPDLSIVWIDPDDFPLLVAYWEKTFKIDL 305
Query: 1155 ISLHIAAMWRMDYKKIKY 1172
I + D +
Sbjct: 306 FKPQIGVVNVTDADSVWM 323
|
| >3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A Length = 241 | Back alignment and structure |
|---|
Score = 56.0 bits (135), Expect = 2e-08
Identities = 42/207 (20%), Positives = 71/207 (34%), Gaps = 29/207 (14%)
Query: 769 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDLFGTTDGFSGQDSASRN---- 824
L+ FY+ WC C Q P ++K+ + L D S ASR
Sbjct: 36 LLEFYAPWCGHCKQFAPEYEKIANILKDKDPPI------PVAKIDATSASVLASRFDVSG 89
Query: 825 ------FHNHMYNPF------DDVFSEGFNFPFEEHDISLFHKLSTTHWNFEKNYIPKSY 872
+ +++ ++ + L T NF++
Sbjct: 90 YPTIKILKKGQAVDYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADI 149
Query: 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELS--PLGVGFFTVHVHNEQGLARRLGVGSQL 930
L+ FY+ WC C ++ P ++K ELS + V E LA+R V S
Sbjct: 150 I---LVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDV-SGY 205
Query: 931 PQIALLTDGRTSFFKEPSFSVQKMVEF 957
P + + GR + P +V++
Sbjct: 206 PTLKIFRKGRPYDYNGP-REKYGIVDY 231
|
| >3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A Length = 241 | Back alignment and structure |
|---|
Score = 49.8 bits (119), Expect = 2e-06
Identities = 37/189 (19%), Positives = 72/189 (38%), Gaps = 25/189 (13%)
Query: 877 LILFYSDWCFACLQVEPIFKKLMDELSPLG--VGFFTVHVHNEQGLARRLGVGSQLPQIA 934
L+ FY+ WC C Q P ++K+ + L + + + LA R V P I
Sbjct: 36 LLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSG-YPTIK 94
Query: 935 LLTDGRTSFFKEPSFSVQKMVEFFR------LKLPYKLIVPLSATNVDAFLDNWREDNKV 988
+L G+ ++ + +++V R P ++ + L+ N D + D +
Sbjct: 95 ILKKGQAVDYEGS-RTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVV----NDADI 149
Query: 989 HALLF--------QRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKD 1040
+ F ++ P + K I + D + + +RF V G
Sbjct: 150 ILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKV--DATAETDLAKRFDVSGY-P 206
Query: 1041 SLLIFKEDK 1049
+L IF++ +
Sbjct: 207 TLKIFRKGR 215
|
| >3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181 | Back alignment and structure |
|---|
Score = 55.0 bits (132), Expect = 2e-08
Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 9/80 (11%)
Query: 630 FINCAVSLDPYETLGVPR-------TASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQL 682
+ + YE T +RK Y++L + HPD E+ L
Sbjct: 4 LVQRRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMA--QQGSEQSSTL 61
Query: 683 TEAYNILSDAERRKQYDLFG 702
+AY+ L D RR QY L
Sbjct: 62 NQAYHTLKDPLRRSQYMLKL 81
|
| >3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3trq_A* 3trp_A* 3uom_A Length = 367 | Back alignment and structure |
|---|
Score = 55.4 bits (133), Expect = 8e-08
Identities = 47/305 (15%), Positives = 104/305 (34%), Gaps = 22/305 (7%)
Query: 877 LILFYSDWCFACLQV------EPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQL 930
+L++ E I + L GVGF V + +A++LG+ ++
Sbjct: 34 ALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGL-TEE 92
Query: 931 PQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHA 990
I + + + FS +VEF L + + + AF + ED
Sbjct: 93 DSIYVFKEDEVIEYDGE-FSADTLVEFLLDVLEDPVELIEGERELQAFENI--EDEIKLI 149
Query: 991 LLFQRSLPVRLRYLIN-AFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDK 1049
F+ + A + I F S V ++ + + + ++
Sbjct: 150 GYFKNKDSEHYKAFKEAAEEFHPYIPFFATF-----DSKVAKKLTL--KLNEIDFYEAFM 202
Query: 1050 DRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVC-PVKKLCVVLF-SEDSPE 1107
+ P +I + + + + TL ++ +SM + + + +V F E P+
Sbjct: 203 EEP-VTIPDKPNSEEEIVNFVEEHRRSTLRKLKPESMYETWEDDMDGIHIVAFAEEADPD 261
Query: 1108 HDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDY 1167
L+ AQ++ + +++ +++ + P V D + I + D
Sbjct: 262 GYEFLEILKSVAQDNT-DNPDLSIIWIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVTDA 320
Query: 1168 KKIKY 1172
+
Sbjct: 321 DSVWM 325
|
| >2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 54.6 bits (131), Expect = 1e-07
Identities = 36/283 (12%), Positives = 87/283 (30%), Gaps = 24/283 (8%)
Query: 877 LILFYSDWCFACLQVEPIFKKLMDEL-----SPLGVGFFTVHVHNEQGLARRLGVGSQLP 931
L+ FY+DWC + PIF++ D + + V F V +A+R + S+ P
Sbjct: 26 LVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRI-SKYP 84
Query: 932 QIALLTDGRTSFFK-EPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHA 990
+ L +G + SV+ + ++ R + + + +
Sbjct: 85 TLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITTLD----RSKRNII 140
Query: 991 LLFQRSL-PVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDK 1049
F++ + A F D V + + G D+++
Sbjct: 141 GYFEQKDSDNYRVFERVANILHDDCAFLSAFGD------VSKPERYSG--DNIIYKPPGH 192
Query: 1050 DRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVKKLCVVLFSEDSPEH- 1108
P + + + I+ ++ + ++ ++ E
Sbjct: 193 SAPDMVYLGAMTNFDVTYNWIQDKCVPLVREITFENGEELTEEGLPFLILFHMKEDTESL 252
Query: 1109 DASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPED 1151
+ ++ + R + I F++ +K + +
Sbjct: 253 EIFQNEVARQLISEK---GTINFLHADCDKFRHPLLHIQKTPA 292
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* Length = 287 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 2e-07
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 862 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFT---VHVHNEQ 918
N ++ + +S TTP L F+S+ CLQ+ PI + L + + G F + EQ
Sbjct: 16 NLQQ-VLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYN----GQFILAKLDCDAEQ 70
Query: 919 GLARRLGVGSQLPQIALLTDGR 940
+A + G+ + +P + L +G+
Sbjct: 71 MIAAQFGLRA-IPTVYLFQNGQ 91
|
| >3h0g_H DNA-directed RNA polymerases I, II, and III subunit rpabc3; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 125 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 6e-07
Identities = 13/76 (17%), Positives = 34/76 (44%), Gaps = 12/76 (15%)
Query: 534 LLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHSGN-----DVNTWLYPVDLGDKFRLV 588
LL++ F++ VD++ + + + A + D+N+ +YP++ F L
Sbjct: 6 LLDEIFTVTSVDKQKY-------QRVSRITAVSGQNDMNLTLDINSQIYPLEKDATFSLQ 58
Query: 589 LATTLREDGYPDSGEW 604
+ + L ++ ++
Sbjct: 59 ITSNLNSPDLKEAADY 74
|
| >2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 137 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 4e-06
Identities = 17/84 (20%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 862 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLA 921
++ + + ++ F+++W C PI+ L + + G+ F V V ++
Sbjct: 16 TIDEE-LERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVS 74
Query: 922 RRLGVGS-----QLPQIALLTDGR 940
R V + QLP + L G+
Sbjct: 75 TRYKVSTSPLTKQLPTLILFQGGK 98
|
| >2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92 | Back alignment and structure |
|---|
Score = 45.8 bits (108), Expect = 4e-06
Identities = 11/56 (19%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 640 YETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPT----AQEKFLQLTEAYNILSD 691
++ +G+ + ++++K Y++ V+ HP K A+ F++L +A++ +
Sbjct: 36 WKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91
|
| >2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A Length = 142 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 9e-06
Identities = 14/97 (14%), Positives = 30/97 (30%), Gaps = 6/97 (6%)
Query: 849 DISLFHKLSTTHW-----NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELS 903
+L+ +L T W + ++I + L+ + +L+ E
Sbjct: 7 FSALWQRLLTRGWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREFP 66
Query: 904 PLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGR 940
+ + + R V P + TDG+
Sbjct: 67 QFDWQVAVADLEQSEAIGDRFNVRR-FPATLVFTDGK 102
|
| >3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A Length = 361 | Back alignment and structure |
|---|
Score = 48.1 bits (114), Expect = 2e-05
Identities = 37/268 (13%), Positives = 65/268 (24%), Gaps = 49/268 (18%)
Query: 669 KNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDSASRNFHNHMYNPFDDV 728
K+ + + ++FLQ AE T++ ++ FD+
Sbjct: 44 KDVESDSAKQFLQA---------AEAIDDIPFGITSNSDVFSKYQLDKDGVVLFKKFDEG 94
Query: 729 FSEGFNFPFEEHDISLFHKLSTTHW-------NFEKNYIPKSYTTPHLILFYSDWCFACL 781
+ F + ++ F K + K + H++LF
Sbjct: 95 RNN-FEGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIF--GGEIKTHILLFLPKSVSDYD 151
Query: 782 QVEPIFKKLMDELSPLGVGFFTVHYDLFG-------------TTDGFSGQDSASRNFHNH 828
FK + + F + D
Sbjct: 152 GKLSNFKTAAESFKGKIL-FIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYK 210
Query: 829 MYNPFDDV---------FSEGFNFPFEEHDISLFHKLST-----THWNFEKNYIPKSYTT 874
+ F EG P NFE +
Sbjct: 211 PESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNV 270
Query: 875 PHLILFYSDWCFACLQVEPIFKKLMDEL 902
+ FY+ WC C Q+ PI+ KL +
Sbjct: 271 --FVEFYAPWCGHCKQLAPIWDKLGETY 296
|
| >3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106 | Back alignment and structure |
|---|
Score = 44.2 bits (104), Expect = 2e-05
Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
Query: 640 YETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDP--------TAQEKFLQLTEAYNILS 690
++ + + +RK+Y+R ++ HPDK A++ F L EA++ +
Sbjct: 43 WKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFN 101
|
| >3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens} Length = 244 | Back alignment and structure |
|---|
Score = 46.5 bits (110), Expect = 3e-05
Identities = 29/210 (13%), Positives = 64/210 (30%), Gaps = 29/210 (13%)
Query: 862 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDEL----SPLGVGFF--TVHVH 915
+ S + + F++ WC C+ P + L +++ L + +
Sbjct: 21 TVRG-AVLGS-RSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETN 78
Query: 916 NEQGLARRLGVGSQLPQI----ALLTDGRTSFFKEPSFSVQKMVEFFRLKLP-------- 963
+ + R + P + A +G + F VQ + E L
Sbjct: 79 SA--VCRDFNI-PGFPTVRFFXAFTXNGSGAVFPVAGADVQTLRERLIDALESHHDTWPP 135
Query: 964 -YKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYD 1022
+ P +D F + + AL+F+ R + + ++
Sbjct: 136 ACPPLEPAXLEEIDGFFARN--NEEYLALIFEXGGSYLAREVALDLSQHKGVAVRRVL-- 191
Query: 1023 QEDSSSVFQRFKVPGDKDSLLIFKEDKDRP 1052
++V ++F V L+F+
Sbjct: 192 -NTEANVVRKFGVTDFPSCYLLFRNGSVSR 220
|
| >3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens} Length = 244 | Back alignment and structure |
|---|
Score = 42.7 bits (100), Expect = 5e-04
Identities = 29/231 (12%), Positives = 59/231 (25%), Gaps = 40/231 (17%)
Query: 754 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL---------------- 797
+ S + + F++ WC C+ P + L +++
Sbjct: 21 TVRG-AVLGS-RSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETN 78
Query: 798 -------GV-GFFTVHYDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEGFNFPFEEHD 849
+ GF TV + T +G + + D +
Sbjct: 79 SAVCRDFNIPGFPTVRFFXAFTXNGSGAVFPVAGADVQTLRERLIDALE-----SHHDTW 133
Query: 850 ISLFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGF 909
L + ++ ++F + +V + V
Sbjct: 134 PPACPPLEPAXLEEIDGFFARNNEEYLALIFEXGGSYLAREVALDLSQHKG------VAV 187
Query: 910 FTVHVHNEQGLARRLGVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFR 959
V E + R+ GV + P LL +G S S + +
Sbjct: 188 RRVLN-TEANVVRKFGV-TDFPSCYLLFRNGSVSRVPVLMESRSFYTAYLQ 236
|
| >2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A Length = 110 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 5e-05
Identities = 14/83 (16%), Positives = 27/83 (32%), Gaps = 3/83 (3%)
Query: 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN 916
+ E + ++ F+ + C C +E + K V +V
Sbjct: 3 AIRDITTEAGMAHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEA 60
Query: 917 EQGLARRLGVGSQLPQIALLTDG 939
L + LG +P + + DG
Sbjct: 61 RPELMKELGFER-VPTLVFIRDG 82
|
| >1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 126 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 5e-05
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 875 PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934
+I FY+ WC AC ++P ++ + L V V V + GL+ R + + LP I
Sbjct: 24 DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINA-LPTIY 82
Query: 935 LLTDG 939
DG
Sbjct: 83 HCKDG 87
|
| >4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus} Length = 105 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 6e-05
Identities = 11/66 (16%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 875 PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934
L+ ++ C C + +++ + V + + + Q +A R V + P +
Sbjct: 20 LVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQDMQEIAGRYAVFT-GPTVL 76
Query: 935 LLTDGR 940
L +G+
Sbjct: 77 LFYNGK 82
|
| >2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens} Length = 126 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 13/83 (15%), Positives = 30/83 (36%), Gaps = 2/83 (2%)
Query: 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP-LGVGFFTVH 913
+++ N +N P +I+F +D C C++++ + E + + +
Sbjct: 8 QINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLE 67
Query: 914 VHNEQGLARRLGVGSQLPQIALL 936
LA + +P L
Sbjct: 68 EEKNIDLAYKYDANI-VPTTVFL 89
|
| >3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ... Length = 105 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 1e-04
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 862 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLA 921
+ + + ++ F + WC C ++P F L ++ S V F V V + Q +A
Sbjct: 9 TAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS--NVIFLEVDVDDCQDVA 66
Query: 922 RRLGVGS 928
V S
Sbjct: 67 SESEVKS 73
|
| >3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae} Length = 112 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 8/72 (11%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Query: 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN 916
+ + ++ F++ W C ++ +F+ + +E S V F ++
Sbjct: 7 DQEQFTYLTTTAAGD--KLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADE 64
Query: 917 EQGLARRLGVGS 928
++ + +
Sbjct: 65 NSEISELFEISA 76
|
| >3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C* Length = 116 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 862 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLA 921
+ + + ++ F + WC ++P F L ++ S V F V V + Q +A
Sbjct: 20 TAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYS--NVIFLEVDVDDCQDVA 77
Query: 922 RRLGVGS 928
V S
Sbjct: 78 SECEVKS 84
|
| >1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1 Length = 107 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 7e-04
Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 865 KNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRL 924
+ + + + ++ F C CL++ P F + ++ F V VH QG A
Sbjct: 13 QPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQCQGTAATN 70
Query: 925 GVGS 928
+ +
Sbjct: 71 NISA 74
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1578 | |||
| 3apo_A | 780 | DNAJ homolog subfamily C member 10; PDI family, th | 100.0 | |
| 3us3_A | 367 | Calsequestrin-1; calcium-binding protein; 1.74A {O | 100.0 | |
| 1sji_A | 350 | Calsequestrin 2, calsequestrin, cardiac muscle iso | 99.97 | |
| 2r2j_A | 382 | Thioredoxin domain-containing protein 4; CRFS moti | 99.97 | |
| 3f8u_A | 481 | Protein disulfide-isomerase A3ERP57; endoplasmic r | 99.96 | |
| 3apq_A | 210 | DNAJ homolog subfamily C member 10; thioredoxin fo | 99.96 | |
| 2b5e_A | 504 | Protein disulfide-isomerase; 2.40A {Saccharomyces | 99.95 | |
| 3apo_A | 780 | DNAJ homolog subfamily C member 10; PDI family, th | 99.92 | |
| 3idv_A | 241 | Protein disulfide-isomerase A4; thioredoxin-like f | 99.9 | |
| 3ed3_A | 298 | Protein disulfide-isomerase MPD1; thioredoxin-like | 99.88 | |
| 3f8u_A | 481 | Protein disulfide-isomerase A3ERP57; endoplasmic r | 99.88 | |
| 3us3_A | 367 | Calsequestrin-1; calcium-binding protein; 1.74A {O | 99.83 | |
| 1a8l_A | 226 | Protein disulfide oxidoreductase; PDI, thioredoxin | 99.83 | |
| 1sji_A | 350 | Calsequestrin 2, calsequestrin, cardiac muscle iso | 99.82 | |
| 2ywm_A | 229 | Glutaredoxin-like protein; redox protein, structur | 99.79 | |
| 3uem_A | 361 | Protein disulfide-isomerase; thioredoxin-like doma | 99.79 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.77 | |
| 2b5e_A | 504 | Protein disulfide-isomerase; 2.40A {Saccharomyces | 99.77 | |
| 3idv_A | 241 | Protein disulfide-isomerase A4; thioredoxin-like f | 99.77 | |
| 2r2j_A | 382 | Thioredoxin domain-containing protein 4; CRFS moti | 99.77 | |
| 3q6o_A | 244 | Sulfhydryl oxidase 1; protein disulfide isomerase, | 99.74 | |
| 2hls_A | 243 | Protein disulfide oxidoreductase; thioredoxin fold | 99.69 | |
| 3t58_A | 519 | Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2. | 99.67 | |
| 3uem_A | 361 | Protein disulfide-isomerase; thioredoxin-like doma | 99.65 | |
| 3zzx_A | 105 | Thioredoxin; oxidoreductase; 1.88A {Litopenaeus va | 99.59 | |
| 1bq0_A | 103 | DNAJ, HSP40; chaperone, heat shock, protein foldin | 99.59 | |
| 3h79_A | 127 | Thioredoxin-like protein; thioredoxin fold, cataly | 99.58 | |
| 2ctp_A | 78 | DNAJ homolog subfamily B member 12; J-domain, chap | 99.57 | |
| 1hdj_A | 77 | Human HSP40, HDJ-1; molecular chaperone; NMR {Homo | 99.57 | |
| 3ec3_A | 250 | Protein disulfide-isomerase A4; thioredoxin-like f | 99.56 | |
| 2ctr_A | 88 | DNAJ homolog subfamily B member 9; J-domain, chape | 99.55 | |
| 2h8l_A | 252 | Protein disulfide-isomerase A3; thioredoxin-like f | 99.54 | |
| 2ywm_A | 229 | Glutaredoxin-like protein; redox protein, structur | 99.54 | |
| 2dn9_A | 79 | DNAJ homolog subfamily A member 3; J-domain, TID1, | 99.54 | |
| 2qsi_A | 137 | Putative hydrogenase expression/formation protein; | 99.53 | |
| 2cug_A | 88 | Mkiaa0962 protein; DNAJ-like domain, structural ge | 99.53 | |
| 1a8l_A | 226 | Protein disulfide oxidoreductase; PDI, thioredoxin | 99.52 | |
| 2voc_A | 112 | Thioredoxin; electron transport, homodimer, disulf | 99.52 | |
| 2ej7_A | 82 | HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati | 99.52 | |
| 2dmx_A | 92 | DNAJ homolog subfamily B member 8; DNAJ J domain, | 99.51 | |
| 3gnj_A | 111 | Thioredoxin domain protein; APC92103, STR genomics | 99.51 | |
| 2qgv_A | 140 | Hydrogenase-1 operon protein HYAE; alpha-beta prot | 99.49 | |
| 2trx_A | 108 | Thioredoxin; electron transport; 1.68A {Escherichi | 99.49 | |
| 1x5d_A | 133 | Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC | 99.49 | |
| 1mek_A | 120 | Protein disulfide isomerase; electron transport, r | 99.49 | |
| 4f9z_D | 227 | Endoplasmic reticulum resident protein 27; thiored | 99.49 | |
| 3die_A | 106 | Thioredoxin, TRX; electron transport, SWAP domain, | 99.49 | |
| 4euy_A | 105 | Uncharacterized protein; structural genomics, PSI- | 99.49 | |
| 2och_A | 73 | Hypothetical protein DNJ-12; HSP40, J-domain, chap | 99.48 | |
| 3ed3_A | 298 | Protein disulfide-isomerase MPD1; thioredoxin-like | 99.48 | |
| 3uvt_A | 111 | Thioredoxin domain-containing protein 5; thioredox | 99.48 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 99.48 | |
| 2dj1_A | 140 | Protein disulfide-isomerase A4; protein ERP-72, ER | 99.48 | |
| 2i4a_A | 107 | Thioredoxin; acidophIle, disulfide exchange, oxido | 99.48 | |
| 2dml_A | 130 | Protein disulfide-isomerase A6; thioredoxin domain | 99.48 | |
| 3tco_A | 109 | Thioredoxin (TRXA-1); disulfide oxidoreductase, ox | 99.47 | |
| 3ga4_A | 178 | Dolichyl-diphosphooligosaccharide-protein glycosyl | 99.47 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.47 | |
| 1t00_A | 112 | Thioredoxin, TRX; redox regulation, multifunction | 99.47 | |
| 1thx_A | 115 | Thioredoxin, thioredoxin 2; oxido-reductase, elect | 99.47 | |
| 1nsw_A | 105 | Thioredoxin, TRX; thermostability, electron transp | 99.47 | |
| 2av4_A | 160 | Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECI | 99.47 | |
| 3hz4_A | 140 | Thioredoxin; NYSGXRC, PSI-II, reduced form, protei | 99.47 | |
| 1x5e_A | 126 | Thioredoxin domain containing protein 1; TMX, TXND | 99.46 | |
| 1dby_A | 107 | Chloroplast thioredoxin M CH2; thioredoxin CH2, ch | 99.46 | |
| 2yua_A | 99 | Williams-beuren syndrome chromosome region 18 prot | 99.46 | |
| 2lgw_A | 99 | DNAJ homolog subfamily B member 2; J domain, HSJ1A | 99.46 | |
| 1wjz_A | 94 | 1700030A21RIK protein; J-domain, DNAJ like protein | 99.46 | |
| 3lz8_A | 329 | Putative chaperone DNAJ; structure genomics, struc | 99.46 | |
| 3qfa_C | 116 | Thioredoxin; protein-protein complex, rossmann fol | 99.46 | |
| 2o8v_B | 128 | Thioredoxin 1; disulfide crosslinked complex, oxid | 99.46 | |
| 1w4v_A | 119 | Thioredoxin, mitochondrial; antioxidant enzyme, mi | 99.45 | |
| 2ppt_A | 155 | Thioredoxin-2; thiredoxin, zinc finger, oxidoreduc | 99.45 | |
| 2yzu_A | 109 | Thioredoxin; redox protein, electron transport, st | 99.45 | |
| 1fb6_A | 105 | Thioredoxin M; electron transport; 2.10A {Spinacia | 99.45 | |
| 2ctq_A | 112 | DNAJ homolog subfamily C member 12; J-domain, chap | 99.45 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.44 | |
| 2l5l_A | 136 | Thioredoxin; structural genomics, electron transpo | 99.44 | |
| 2e0q_A | 104 | Thioredoxin; electron transport; 1.49A {Sulfolobus | 99.44 | |
| 2ctw_A | 109 | DNAJ homolog subfamily C member 5; J-domain, chape | 99.44 | |
| 3p2a_A | 148 | Thioredoxin 2, putative thioredoxin-like protein; | 99.44 | |
| 3d6i_A | 112 | Monothiol glutaredoxin-3; thioredoxin-like, electr | 99.43 | |
| 2i1u_A | 121 | Thioredoxin, TRX, MPT46; redox protein, electron t | 99.43 | |
| 2djj_A | 121 | PDI, protein disulfide-isomerase; thioredoxin fold | 99.42 | |
| 3hxs_A | 141 | Thioredoxin, TRXP; electron transport; 2.00A {Bact | 99.42 | |
| 1oaz_A | 123 | Thioredoxin 1; immune system, antibody/complex, an | 99.42 | |
| 2dj0_A | 137 | Thioredoxin-related transmembrane protein 2; AVLA2 | 99.41 | |
| 2dj3_A | 133 | Protein disulfide-isomerase A4; protein ERP-72, ER | 99.41 | |
| 2o37_A | 92 | Protein SIS1; HSP40, J-domain, cochaperone, APC900 | 99.41 | |
| 3aps_A | 122 | DNAJ homolog subfamily C member 10; thioredoxin fo | 99.41 | |
| 3f3q_A | 109 | Thioredoxin-1; His TAG, electron transport, cytopl | 99.4 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 99.4 | |
| 1r26_A | 125 | Thioredoxin; redox-active disulfide, electron tran | 99.4 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 99.4 | |
| 1gh2_A | 107 | Thioredoxin-like protein; redox-active center, ele | 99.4 | |
| 3dxb_A | 222 | Thioredoxin N-terminally fused to PUF60(UHM); spli | 99.4 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.4 | |
| 1xwb_A | 106 | Thioredoxin; dimerization, redox regulation, THI X | 99.39 | |
| 3ul3_B | 128 | Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; | 99.39 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.39 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 99.39 | |
| 3m9j_A | 105 | Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} | 99.39 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 99.38 | |
| 2xc2_A | 117 | Thioredoxinn; oxidoreductase, protein disulfide re | 99.38 | |
| 1ep7_A | 112 | Thioredoxin CH1, H-type; electron transport; 2.10A | 99.38 | |
| 2pu9_C | 111 | TRX-F, thioredoxin F-type, chloroplast; protein-pr | 99.38 | |
| 2qsa_A | 109 | DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s | 99.38 | |
| 2l6c_A | 110 | Thioredoxin; oxidoreductase; NMR {Desulfovibrio vu | 99.38 | |
| 2wz9_A | 153 | Glutaredoxin-3; protein binding; 1.55A {Homo sapie | 99.38 | |
| 1v98_A | 140 | Thioredoxin; oxidoreductase, structural genomics, | 99.37 | |
| 2es7_A | 142 | Q8ZP25_salty, putative thiol-disulfide isomerase a | 99.37 | |
| 3evi_A | 118 | Phosducin-like protein 2; alpha beta, 3-layer(ABA) | 99.37 | |
| 2vlu_A | 122 | Thioredoxin, thioredoxin H isoform 2.; oxidoreduct | 99.37 | |
| 1syr_A | 112 | Thioredoxin; SGPP, structural genomics, PSI, prote | 99.36 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 99.36 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.36 | |
| 3gix_A | 149 | Thioredoxin-like protein 4B; PRE-mRNA splicing, TX | 99.36 | |
| 2vim_A | 104 | Thioredoxin, TRX; thioredoxin fold, oxidoreductase | 99.35 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 99.35 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 99.34 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 99.34 | |
| 1faa_A | 124 | Thioredoxin F; electron transport; 1.85A {Spinacia | 99.34 | |
| 2l57_A | 126 | Uncharacterized protein; structural genomics, unkn | 99.33 | |
| 2ys8_A | 90 | RAB-related GTP-binding protein RABJ; DNAJ domain, | 99.33 | |
| 2j23_A | 121 | Thioredoxin; immune protein, autoreactivity, cross | 99.33 | |
| 3emx_A | 135 | Thioredoxin; structural genomics, oxidoreductase, | 99.33 | |
| 2c0g_A | 248 | ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, | 99.33 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 99.33 | |
| 1xfl_A | 124 | Thioredoxin H1; AT3G51030, structural genomics, pr | 99.33 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 99.33 | |
| 2yj7_A | 106 | LPBCA thioredoxin; oxidoreductase; 1.65A {Syntheti | 99.0 | |
| 2oe3_A | 114 | Thioredoxin-3; electron transport, alpha/beta sand | 99.31 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.31 | |
| 3q6o_A | 244 | Sulfhydryl oxidase 1; protein disulfide isomerase, | 99.31 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 99.3 | |
| 1qgv_A | 142 | Spliceosomal protein U5-15KD; snRNP, thioredoxin, | 99.29 | |
| 1zma_A | 118 | Bacterocin transport accessory protein; alpha-beta | 99.29 | |
| 1gh6_A | 114 | Large T antigen; tumor suppressor, oncoprotein, an | 99.29 | |
| 2l6l_A | 155 | DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, | 99.28 | |
| 2qc7_A | 240 | ERP31, ERP28, endoplasmic reticulum protein ERP29; | 99.28 | |
| 1ti3_A | 113 | Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Popul | 99.28 | |
| 3cxg_A | 133 | Putative thioredoxin; malaria, structural GEN oxid | 99.27 | |
| 2dbc_A | 135 | PDCL2, unnamed protein product; phosducin-like pro | 99.27 | |
| 2pf4_E | 174 | Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, | 99.27 | |
| 2vm1_A | 118 | Thioredoxin, thioredoxin H isoform 1.; oxidoreduct | 99.27 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 99.26 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 99.25 | |
| 1faf_A | 79 | Large T antigen; J domain, HPD motif, anti-paralle | 99.25 | |
| 3d22_A | 139 | TRXH4, thioredoxin H-type; electron transport, cyt | 99.25 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.24 | |
| 2f51_A | 118 | Thioredoxin; electron transport; 1.90A {Trichomona | 99.23 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.23 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 99.22 | |
| 2trc_P | 217 | Phosducin, MEKA, PP33; transducin, beta-gamma, sig | 99.22 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 99.22 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.2 | |
| 3hho_A | 174 | CO-chaperone protein HSCB homolog; structural geno | 99.2 | |
| 1iur_A | 88 | KIAA0730 protein; DNAJ like domain, riken structur | 99.2 | |
| 1fo5_A | 85 | Thioredoxin; disulfide oxidoreductase, structural | 99.18 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.18 | |
| 2kuc_A | 130 | Putative disulphide-isomerase; structural genomics | 99.17 | |
| 3qcp_A | 470 | QSOX from trypanosoma brucei (tbqsox); ERV fold, t | 99.17 | |
| 1a0r_P | 245 | Phosducin, MEKA, PP33; transducin, beta-gamma, sig | 99.16 | |
| 1wmj_A | 130 | Thioredoxin H-type; structural genomics, program f | 99.16 | |
| 2hls_A | 243 | Protein disulfide oxidoreductase; thioredoxin fold | 99.16 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.15 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.15 | |
| 1fpo_A | 171 | HSC20, chaperone protein HSCB; molecular chaperone | 99.15 | |
| 1nho_A | 85 | Probable thioredoxin; beta sheet, alpha helix, oxi | 99.15 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 99.14 | |
| 2fwh_A | 134 | Thiol:disulfide interchange protein DSBD; thioredo | 99.14 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 99.14 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.14 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.14 | |
| 1n4c_A | 182 | Auxilin; four helix bundle, protein binding; NMR { | 99.14 | |
| 4f9z_D | 227 | Endoplasmic reticulum resident protein 27; thiored | 99.14 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.13 | |
| 3t58_A | 519 | Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2. | 99.13 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.13 | |
| 3fk8_A | 133 | Disulphide isomerase; APC61824.1, xylella fastidio | 99.13 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 99.13 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 99.12 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 99.12 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.12 | |
| 2qwo_B | 92 | Putative tyrosine-protein phosphatase auxilin; cha | 99.12 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 99.11 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.1 | |
| 3bvo_A | 207 | CO-chaperone protein HSCB, mitochondrial precurso; | 99.1 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.1 | |
| 3ag7_A | 106 | Putative uncharacterized protein F9E10.5; J-domain | 99.08 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 99.08 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 99.07 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 99.07 | |
| 1wou_A | 123 | Thioredoxin -related protein, 14 kDa; electron tra | 99.07 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 99.07 | |
| 2djk_A | 133 | PDI, protein disulfide-isomerase; thioredoxin fold | 99.07 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 99.06 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.06 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.05 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.05 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 99.05 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.05 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.05 | |
| 3uo3_A | 181 | J-type CO-chaperone JAC1, mitochondrial; structura | 99.05 | |
| 2guz_A | 71 | Mitochondrial import inner membrane translocase su | 99.05 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.05 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.05 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 99.05 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 99.04 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.04 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 99.04 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.04 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.04 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.04 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.04 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.04 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 99.04 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.04 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 99.04 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 99.04 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.03 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 99.03 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 99.03 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 99.03 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.03 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.03 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.03 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.03 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 99.02 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.02 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 99.02 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.02 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.02 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.02 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.02 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 99.02 | |
| 3kp8_A | 106 | Vkorc1/thioredoxin domain protein; blood coagulati | 99.02 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.02 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.01 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.01 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 99.01 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.01 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.01 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.01 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.01 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 99.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 99.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 99.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 99.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 98.99 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 98.99 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 98.99 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 98.99 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 98.99 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 98.99 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 98.99 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 98.99 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 98.99 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 98.99 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 98.99 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 98.99 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 98.99 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 98.99 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 98.99 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 98.99 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 98.98 | |
| 2lst_A | 130 | Thioredoxin; structural genomics, NEW YORK structu | 98.54 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 98.98 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 98.98 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 98.98 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 98.98 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 98.98 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 98.98 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 98.98 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 98.98 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 98.98 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 98.98 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 98.97 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 98.97 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 98.97 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 98.97 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 98.97 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 98.97 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 98.97 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 98.97 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 98.97 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 98.96 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 98.96 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 98.96 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 98.96 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 98.96 | |
| 3iv4_A | 112 | Putative oxidoreductase; APC23140, meticillin-resi | 98.96 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 98.96 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 98.96 | |
| 1ilo_A | 77 | Conserved hypothetical protein MTH895; beta-alpha- | 98.96 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 98.96 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 98.96 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 98.95 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 98.95 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 98.95 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 98.95 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 98.95 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 98.95 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 98.95 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 98.95 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 98.95 | |
| 3dml_A | 116 | Putative uncharacterized protein; thioredoxin, oxi | 98.95 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 98.95 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 98.94 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 98.94 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 98.94 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 98.94 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 98.94 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 98.94 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 98.94 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 98.94 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 98.94 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 98.94 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 98.93 | |
| 3f9u_A | 172 | Putative exported cytochrome C biogenesis-related; | 98.93 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 98.93 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 98.93 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 98.93 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 98.93 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 98.93 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 98.92 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 98.92 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 98.92 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 98.92 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 98.92 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 98.92 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 98.92 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 98.92 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 98.91 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 98.91 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 98.91 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 98.91 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 98.91 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 98.91 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 98.91 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 98.91 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 98.91 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 98.91 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 98.91 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 98.91 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 98.91 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 98.9 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 98.9 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 98.9 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 98.9 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 98.9 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 98.9 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 98.9 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 98.9 | |
| 1lu4_A | 136 | Soluble secreted antigen MPT53; thioredoxin-like f | 98.9 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 98.9 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 98.9 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 98.9 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 98.9 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 98.9 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 98.9 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 98.89 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 98.89 | |
| 3erw_A | 145 | Sporulation thiol-disulfide oxidoreductase A; thio | 98.89 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 98.89 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 98.89 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 98.89 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 98.89 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 98.88 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 98.88 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 98.88 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 98.88 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 98.87 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 98.87 | |
| 2ju5_A | 154 | Thioredoxin disulfide isomerase; protein, oxidored | 98.87 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 98.87 | |
| 1zzo_A | 136 | RV1677; thioredoxin fold, structural genomics, PSI | 98.87 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 98.87 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 98.87 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 98.87 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 98.87 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 98.86 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 98.86 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 98.86 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 98.85 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 98.85 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 98.84 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 98.84 | |
| 1sen_A | 164 | Thioredoxin-like protein P19; endoplasmic reticulu | 98.84 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 98.83 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 98.83 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 98.83 | |
| 3or5_A | 165 | Thiol:disulfide interchange protein, thioredoxin p | 98.83 | |
| 2f9s_A | 151 | Thiol-disulfide oxidoreductase RESA; thioredoxin-l | 98.82 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 98.82 | |
| 2b5x_A | 148 | YKUV protein, TRXY; thioredoxin-like, oxidoreducta | 98.82 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 98.81 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 98.81 | |
| 2lja_A | 152 | Putative thiol-disulfide oxidoreductase; structura | 98.81 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 98.81 | |
| 3raz_A | 151 | Thioredoxin-related protein; structural genomics, | 98.81 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 98.81 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 98.8 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 98.78 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 98.77 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 98.77 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 98.77 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.76 | |
| 3hcz_A | 148 | Possible thiol-disulfide isomerase; APC61559.2, cy | 98.75 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 98.75 | |
| 2h30_A | 164 | Thioredoxin, peptide methionine sulfoxide reductas | 98.74 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 98.74 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 98.74 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 98.74 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 98.74 | |
| 3fkf_A | 148 | Thiol-disulfide oxidoreductase; structural genomic | 98.73 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 98.73 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 98.72 | |
| 3ph9_A | 151 | Anterior gradient protein 3 homolog; thioredoxin f | 98.72 | |
| 2l5o_A | 153 | Putative thioredoxin; structural genomics, unknown | 98.7 | |
| 3gl3_A | 152 | Putative thiol:disulfide interchange protein DSBE; | 98.69 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 98.69 | |
| 3lor_A | 160 | Thiol-disulfide isomerase and thioredoxins; PSI, M | 98.67 | |
| 3h79_A | 127 | Thioredoxin-like protein; thioredoxin fold, cataly | 98.67 | |
| 2lrn_A | 152 | Thiol:disulfide interchange protein; structural ge | 98.67 | |
| 3eyt_A | 158 | Uncharacterized protein SPOA0173; thioredoxin-like | 98.66 | |
| 3ia1_A | 154 | THIO-disulfide isomerase/thioredoxin; oxidoreducta | 98.65 | |
| 4evm_A | 138 | Thioredoxin family protein; structural genomics, n | 98.65 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 98.65 | |
| 2h8l_A | 252 | Protein disulfide-isomerase A3; thioredoxin-like f | 98.63 | |
| 2fgx_A | 107 | Putative thioredoxin; NET3, NESG, GFT-glutaredoxin | 98.62 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.61 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 98.61 | |
| 3evi_A | 118 | Phosducin-like protein 2; alpha beta, 3-layer(ABA) | 98.6 | |
| 3zzx_A | 105 | Thioredoxin; oxidoreductase; 1.88A {Litopenaeus va | 98.6 | |
| 2b1k_A | 168 | Thiol:disulfide interchange protein DSBE; C-termin | 98.58 | |
| 3ira_A | 173 | Conserved protein; methanosarcina mazei,structural | 98.58 | |
| 1z6n_A | 167 | Hypothetical protein PA1234; alpha-beta-alpha sand | 98.57 | |
| 1ttz_A | 87 | Conserved hypothetical protein; structural genomic | 98.57 | |
| 3ec3_A | 250 | Protein disulfide-isomerase A4; thioredoxin-like f | 98.56 | |
| 3kp9_A | 291 | Vkorc1/thioredoxin domain protein; warfarin, disul | 98.56 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 98.55 | |
| 2djj_A | 121 | PDI, protein disulfide-isomerase; thioredoxin fold | 98.55 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.55 | |
| 3ewl_A | 142 | Uncharacterized conserved protein BF1870; alpha-be | 98.55 | |
| 3lwa_A | 183 | Secreted thiol-disulfide isomerase; thioredoxin, P | 98.54 | |
| 3hdc_A | 158 | Thioredoxin family protein; ATCC53774, DSM 7210, , | 98.54 | |
| 3kcm_A | 154 | Thioredoxin family protein; SGX, thioredoxin prote | 98.54 | |
| 3ha9_A | 165 | Uncharacterized thioredoxin-like protein; PSI, MCS | 98.53 | |
| 2av4_A | 160 | Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECI | 98.53 | |
| 3eur_A | 142 | Uncharacterized protein; PSI2,MCSG, conserved prot | 98.5 | |
| 2lrt_A | 152 | Uncharacterized protein; structural genomics, thio | 98.5 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 98.49 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 98.49 | |
| 4euy_A | 105 | Uncharacterized protein; structural genomics, PSI- | 98.49 | |
| 2dj3_A | 133 | Protein disulfide-isomerase A4; protein ERP-72, ER | 98.48 | |
| 1kng_A | 156 | Thiol:disulfide interchange protein CYCY; thioredo | 98.47 | |
| 2dj0_A | 137 | Thioredoxin-related transmembrane protein 2; AVLA2 | 98.46 | |
| 2dml_A | 130 | Protein disulfide-isomerase A6; thioredoxin domain | 98.44 | |
| 1i5g_A | 144 | Tryparedoxin II; electron transport; HET: TS5; 1.4 | 98.44 | |
| 2dbc_A | 135 | PDCL2, unnamed protein product; phosducin-like pro | 98.43 | |
| 2ywi_A | 196 | Hypothetical conserved protein; uncharacterized co | 98.42 | |
| 3fw2_A | 150 | Thiol-disulfide oxidoreductase; structural genomic | 98.41 | |
| 1o8x_A | 146 | Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrot | 98.41 | |
| 2hyx_A | 352 | Protein DIPZ; thioredoxin fold, jelly-roll, struct | 98.41 | |
| 2voc_A | 112 | Thioredoxin; electron transport, homodimer, disulf | 98.39 | |
| 1jfu_A | 186 | Thiol:disulfide interchange protein TLPA; thioredo | 98.39 | |
| 1o73_A | 144 | Tryparedoxin; electron transport, trypanosomatid, | 98.38 | |
| 3s9f_A | 165 | Tryparedoxin; thioredoxin fold, disulfide reductas | 98.37 | |
| 3d6i_A | 112 | Monothiol glutaredoxin-3; thioredoxin-like, electr | 98.37 | |
| 3bj5_A | 147 | Protein disulfide-isomerase; thioredoxin fold, cha | 98.37 | |
| 3hxs_A | 141 | Thioredoxin, TRXP; electron transport; 2.00A {Bact | 98.36 | |
| 3die_A | 106 | Thioredoxin, TRX; electron transport, SWAP domain, | 98.34 | |
| 4fo5_A | 143 | Thioredoxin-like protein; AHPC/TSA family protein, | 98.33 | |
| 2cvb_A | 188 | Probable thiol-disulfide isomerase/thioredoxin; re | 98.33 | |
| 3gnj_A | 111 | Thioredoxin domain protein; APC92103, STR genomics | 98.33 | |
| 1x5d_A | 133 | Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC | 98.33 | |
| 2dj1_A | 140 | Protein disulfide-isomerase A4; protein ERP-72, ER | 98.32 | |
| 3aps_A | 122 | DNAJ homolog subfamily C member 10; thioredoxin fo | 98.32 | |
| 3kh7_A | 176 | Thiol:disulfide interchange protein DSBE; TRX-like | 98.32 | |
| 1mek_A | 120 | Protein disulfide isomerase; electron transport, r | 98.32 | |
| 3ga4_A | 178 | Dolichyl-diphosphooligosaccharide-protein glycosyl | 98.32 | |
| 1gh2_A | 107 | Thioredoxin-like protein; redox-active center, ele | 98.31 | |
| 3f3q_A | 109 | Thioredoxin-1; His TAG, electron transport, cytopl | 98.3 | |
| 3uvt_A | 111 | Thioredoxin domain-containing protein 5; thioredox | 98.3 | |
| 2o8v_B | 128 | Thioredoxin 1; disulfide crosslinked complex, oxid | 98.29 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.28 | |
| 2qsi_A | 137 | Putative hydrogenase expression/formation protein; | 98.28 | |
| 2qgv_A | 140 | Hydrogenase-1 operon protein HYAE; alpha-beta prot | 98.27 | |
| 1x5e_A | 126 | Thioredoxin domain containing protein 1; TMX, TXND | 98.27 | |
| 2l5l_A | 136 | Thioredoxin; structural genomics, electron transpo | 98.27 | |
| 1t00_A | 112 | Thioredoxin, TRX; redox regulation, multifunction | 98.26 | |
| 3dxb_A | 222 | Thioredoxin N-terminally fused to PUF60(UHM); spli | 98.26 | |
| 2trx_A | 108 | Thioredoxin; electron transport; 1.68A {Escherichi | 98.26 |
| >3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-43 Score=461.74 Aligned_cols=523 Identities=17% Similarity=0.183 Sum_probs=327.6
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQD 711 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~ 711 (1578)
.....|+|++|||+++||.++||+|||+++++|||||++ ++.+.++|++|++||++|+||.+|+.||++|..+...+.
T Consensus 17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~~- 95 (780)
T 3apo_A 17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ- 95 (780)
T ss_dssp ------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC----------
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccCC-
Confidence 344679999999999999999999999999999999995 678899999999999999999999999999976543221
Q ss_pred CCCcccCCCCCCCcccccccCCCCCCcccccchhhccccccccccccccCCccCccceeccccccccccccchHHHHHHH
Q psy12972 712 SASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLM 791 (1578)
Q Consensus 712 ~~~~~~~~~~~~~f~~~F~~~Fg~~f~~~~~~~~~k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA 791 (1578)
+. .++.|. +|...||.-..+. ....++..||++.+ .++++|+|+||||||+||++++|+|+++|
T Consensus 96 --~~-----~~~~~~-~~~~~fg~~~~~~-----~v~~l~~~~f~~~i---~~~~~~lv~Fya~wC~~C~~~~p~~~~~a 159 (780)
T 3apo_A 96 --GG-----QYESWS-YYRYDFGIYDDDP-----EIITLERREFDAAV---NSGELWFVNFYSPGSSHSHDLAPTWREFA 159 (780)
T ss_dssp ----------------CCSSSSSTTTTCT-----TEEECCHHHHHHHH---TSSSCEEEEEECSSCHHHHHHHHHHHHHH
T ss_pred --CC-----Cccccc-ccchhhcccCCCc-----ceeeechHhHHhhh---cCCCcEEEEEeCCCCcchhHhhHHHHHHH
Confidence 11 111111 2222333221111 34678888999998 56899999999999999999999999999
Q ss_pred HHhcCC-Ccceeeeeecc-cCccccccCCcccccccccc---c-------------------------------------
Q psy12972 792 DELSPL-GVGFFTVHYDL-FGTTDGFSGQDSASRNFHNH---M------------------------------------- 829 (1578)
Q Consensus 792 ~~Lk~~-~vg~v~~~~~~-~~~~~~i~g~~~~~~~~~~i---~------------------------------------- 829 (1578)
+.+++. .++.++|..+. +|+..++.++++......+. .
T Consensus 160 ~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~l~~~ 239 (780)
T 3apo_A 160 KEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAAVKYNGDRSKESLVAFAMQHVRSTVTELSTGNFVNAIETA 239 (780)
T ss_dssp HHTTTTSEEEEEETTTCSSCC--------CEEEEECTTSCCEECCSCSCHHHHHHHHHTTSCCCEEECCHHHHHHHHHHH
T ss_pred HHhcCceEEEEEeCCCcHHHHHHcCCceeeeEEEEeCCcEeeEecCCCCHHHHHHHHHHhchhhheeccchhhHHHHHhh
Confidence 999874 44555554332 66666665554422100000 0
Q ss_pred ---cCcccccccc-cc----------------------------------------------cc-C-----------c--
Q psy12972 830 ---YNPFDDVFSE-GF----------------------------------------------NF-P-----------F-- 845 (1578)
Q Consensus 830 ---~~Ptiklf~~-~~----------------------------------------------~~-~-----------~-- 845 (1578)
..|.+.+|.+ .- .. . |
T Consensus 240 ~~~~~~~vi~f~~~~~~~~~~~~~~~l~~~f~~~~~f~~v~c~~~~~l~~~~gi~~~p~~~f~~~~~~~~~~~~~~~y~g 319 (780)
T 3apo_A 240 FAAGVGWLITFCSKGEDCLTSQTRLRLSGMLDGLVNVGWVDCDAQDSLCKSLDTTASTTAYFPPGATLNDREKSSVLFLN 319 (780)
T ss_dssp HHHTCEEEEEEECTTSCCCCHHHHHHHHHHTTTTEEEEEEETTTSHHHHTCC-----CEEEECTTCCSSTTTGGGSEEEC
T ss_pred hccCCCEEEEEecCcccccCHHHHHHHHHHhhccceEEEEEcCCCHHHHHHhCCCCCceeeeccccccCCCcccceeccc
Confidence 0000000000 00 00 0 0
Q ss_pred --------------------------c--------------C-----------------c-ccceeE-------------
Q psy12972 846 --------------------------E--------------E-----------------H-DISLFH------------- 854 (1578)
Q Consensus 846 --------------------------~--------------~-----------------~-~i~~~~------------- 854 (1578)
+ . . ....+.
T Consensus 320 ~~~~~~i~~~i~~~~p~v~~it~~~f~~~~~~~~~lv~F~~~~~~~~~~~~~~~~A~~~~~~~i~f~~~D~~~~~~~~~~ 399 (780)
T 3apo_A 320 SLDAKEIYMEIIHNLPDFELLSANQLEDRLAHHRWLVFFHFGKNENANDPELKKLKTLLKNEHIQVVRFDCSSAPGICSD 399 (780)
T ss_dssp CCCHHHHHHHHHHHSCCCCEECHHHHHHHHTTSEEEEEEECC-----CCGGGGGHHHHHGGGTEEEEEEEGGGCHHHHHH
T ss_pred cccHHHHHHHHHHhCCCcccCCHHHHHHHhccCCeEEEEecCCccccchHHHHHHHHhhccCceeEEEEeCCCchhhHhh
Confidence 0 0 0 000000
Q ss_pred ------------------------------------------EEeeccccccceecccCCCCcEEEEEEcCCCccccccc
Q psy12972 855 ------------------------------------------KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVE 892 (1578)
Q Consensus 855 ------------------------------------------vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~ 892 (1578)
+.++|.++|.+. .+++++|.|||+||++|+.+.
T Consensus 400 ~~~~~p~i~l~~~~~~e~~~~~~g~~~~~~i~~f~~~~~~~~v~~l~~~~~~~~-----~~~~vlv~F~a~wC~~c~~~~ 474 (780)
T 3apo_A 400 LYVFQPSLAVFKGQGTKEYEIHHGKKILYDILAFAKESVNSHVTTLGPQNFPAS-----DKEPWLVDFFAPWSPPSRALL 474 (780)
T ss_dssp TTCCSCEEEEEESSTTSSEEECCSCCCHHHHHHHHHHHHTSCEEECCTTTSCTT-----CCSCEEEEEECTTCHHHHHHH
T ss_pred ccccCChhhhccCCCcceeeecccHhhHHHHHHHhhhccCCCCEecCHHHHHHc-----CCCeEEEEEECCCCHHHHHHh
Confidence 123344444432 367999999999999999999
Q ss_pred HHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHHHHHHhhCCCcccccccc
Q psy12972 893 PIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSA 972 (1578)
Q Consensus 893 p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~ 972 (1578)
|.|+++|+.+++. +.|+.|||+.++.+|+.|||++ +||+++|++|+.. .+.|.++.++|.+|+.+.+.++ +..++.
T Consensus 475 p~~~~~a~~~~~~-v~~~~vd~~~~~~~~~~~~v~~-~Pt~~~~~~g~~~-~~~g~~~~~~l~~fi~~~~~~~-v~~l~~ 550 (780)
T 3apo_A 475 PELRKASTLLYGQ-LKVGTLDCTIHEGLCNMYNIQA-YPTTVVFNQSSIH-EYEGHHSAEQILEFIEDLRNPS-VVSLTP 550 (780)
T ss_dssp HHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCS-SSEEEEEETTEEE-EECSCSCHHHHHHHHHHHHSCS-EEECCH
T ss_pred HHHHHHHHHhcCC-eEEEEEeCCCCHHHHHHcCCCc-CCeEEEEcCCcee-eecCcccHHHHHHHHHhhcccc-eeecCc
Confidence 9999999999875 9999999999999999999998 9999999888774 4459999999999999988765 555678
Q ss_pred ccHHHHhhcccCCCcEEEEEeccCC---chHH-HHHHHHhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccC
Q psy12972 973 TNVDAFLDNWREDNKVHALLFQRSL---PVRL-RYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKED 1048 (1578)
Q Consensus 973 ~~~~~fl~~~~~~~~~~VlfF~~~~---~~~~-~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~ 1048 (1578)
+++++++.....+..++|.||..-. .... .+...|..+++++.|+.+++ ..+..++++|+|.+ .|++++|+.+
T Consensus 551 ~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~v~~~~vd~--~~~~~l~~~~~v~~-~Pti~~~~~~ 627 (780)
T 3apo_A 551 STFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLINVGSVDC--GQYHSFCTQENVQR-YPEIRFYPQK 627 (780)
T ss_dssp HHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEET--TTTHHHHHHTTCCS-SSEEEEECCC
T ss_pred ccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCCeEEEEEEC--cchHHHHHHcCCCC-CCeEEEEcCC
Confidence 8999988763122345666663321 1111 22223445667899998854 46788999999987 5799999764
Q ss_pred CCCCcccc-ccC-CCCchhhhhhhhcCCCCCCcccCchhhhhhcCCCCceEEEEEe-cCCcchHHHHHHHHHHHhhccCC
Q psy12972 1049 KDRPSASI-TMN-SIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVKKLCVVLFS-EDSPEHDASRHTLRRFAQESRFV 1125 (1578)
Q Consensus 1049 ~~~~~~~l-~~~-~l~~~~L~~fI~~nk~p~vpeLts~~~~~~~c~~~~lcVll~~-~~~~~~~~~~~~lr~vA~~~~~~ 1125 (1578)
......+. ..+ ..+...|.+|+.....+.+.+++..++.+.++..++.++|.|. +...........+.++|++ ++
T Consensus 628 ~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~~v~~l~~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~--~~ 705 (780)
T 3apo_A 628 SSKAYQYHSYNGWNRDAYSLRSWGLGFLPQASIDLTPQTFNEKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARM--IK 705 (780)
T ss_dssp SSSCCSCEECCCSCCSHHHHHHHHHTTSCCCSEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHH--HT
T ss_pred CcCccchhhcCCCCCCHHHHHHHHhhhcccccccCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHH--hc
Confidence 33211111 233 4567789999999998889999988887766655666666664 4445677788899999999 76
Q ss_pred CCcEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEEcCCc--ceEeeccCCcccccccccccHHHHHHHhhhhhcC
Q psy12972 1126 HNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKK--IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVND 1203 (1578)
Q Consensus 1126 ~~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~n~~~--~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g 1203 (1578)
++ +.|++||.+..+++++.+ +. .++|.+++....+ .+|.=.. ....+.+.|..+|++.+..
T Consensus 706 ~~-~~~~~vd~~~~~~~~~~~-------~v-~~~Pt~~~~~~g~~~~~~~G~~--------~g~~~~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 706 GK-VRAGKVDCQAYPQTCQKA-------GI-KAYPSVKLYQYERAKKSIWEEQ--------INSRDAKTIAALIYGKLET 768 (780)
T ss_dssp TT-CEEEEEETTTCHHHHHHT-------TC-CSSSEEEEEEEETTTTEEEEEE--------ECCCCHHHHHHHHHHHTTC
T ss_pred CC-ceEEEEECCCCHHHHHhc-------CC-CcCCEEEEEcCCCccccccCcc--------cCCcCHHHHHHHHHHHHHH
Confidence 65 999999999999999887 32 4677766553322 2232110 0124678899999988753
|
| >3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-32 Score=326.17 Aligned_cols=321 Identities=15% Similarity=0.185 Sum_probs=253.5
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCccccc---cc---HHHHHHHHHhCCCceEEEEEECccchhhHhHcCccc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQ---VE---PIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGS 928 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~---l~---p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~ 928 (1578)
+++||.+||++.+ +.+++++|.||||||+||+. +. |.|+++|+.+++.++.+++|||++++++|++|+|++
T Consensus 15 v~~lt~~~f~~~i---~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~~ 91 (367)
T 3us3_A 15 VINVNAKNYKNVF---KKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLTE 91 (367)
T ss_dssp CEECCTTTHHHHH---HHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCCS
T ss_pred cEECCHHHHHHHH---hhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCCc
Confidence 5679999999977 34789999999999999733 22 699999999987679999999999999999999998
Q ss_pred cCCcEEEEcCCccccccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhh-cccCCCcEEEEEeccCCchHHHHHHH-
Q psy12972 929 QLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLD-NWREDNKVHALLFQRSLPVRLRYLIN- 1006 (1578)
Q Consensus 929 ~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~-~~~~~~~~~VlfF~~~~~~~~~~~~~- 1006 (1578)
|||+++|++|+... |.|.++.+.|++|+.+++++++..+.+.+++++|++ +. +.++|+||.+..++....+..
T Consensus 92 -~PTl~~f~~G~~~~-y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~---~~~vv~ff~~~~~~~~~~f~~~ 166 (367)
T 3us3_A 92 -EDSIYVFKEDEVIE-YDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIED---EIKLIGYFKNKDSEHYKAFKEA 166 (367)
T ss_dssp -TTEEEEEETTEEEE-CCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCS---SCEEEEECSCTTCHHHHHHHHH
T ss_pred -CceEEEEECCcEEE-eCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCC---CcEEEEEECCCCchHHHHHHHH
Confidence 99999999998764 559999999999999999887666667788999997 43 678888888766666555544
Q ss_pred HhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhhcCCCCCCcccCchhh
Q psy12972 1007 AFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSM 1086 (1578)
Q Consensus 1007 a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~nk~p~vpeLts~~~ 1086 (1578)
|..+++.+.|+.+ .+..++++|+++. |+|++|+...+.+..+ ..+..+...|.+||..+.+|+++++|.+++
T Consensus 167 A~~~~~~~~F~~~-----~~~~~~~~~~v~~--p~i~lf~~~~~~~~~y-~g~~~~~~~l~~fi~~~~~p~v~elt~~~~ 238 (367)
T 3us3_A 167 AEEFHPYIPFFAT-----FDSKVAKKLTLKL--NEIDFYEAFMEEPVTI-PDKPNSEEEIVNFVEEHRRSTLRKLKPESM 238 (367)
T ss_dssp HHHHTTTSCEEEE-----CCHHHHHHHTCCT--TCEEEECTTCSSCEEC-SSSSCCHHHHHHHHHHTCSCSEEECCGGGH
T ss_pred HHhhcCCcEEEEE-----CCHHHHHHcCCCC--CeEEEEcCCCCCCeec-CCCCCCHHHHHHHHHHcCccceeecChhhH
Confidence 4467789999999 6788999999974 8999998755555444 222367788999999999999999999998
Q ss_pred hhhcCC-CCceEEEEEec-CCcchHHHHHHHHHHHhhccCCCC-cEEEEEEecCcchHHH----HhccCCCCCCccccce
Q psy12972 1087 LDAVCP-VKKLCVVLFSE-DSPEHDASRHTLRRFAQESRFVHN-NIAFMYVFIEKQPEFV----NALTSPEDSSEISLHI 1159 (1578)
Q Consensus 1087 ~~~~c~-~~~lcVll~~~-~~~~~~~~~~~lr~vA~~~~~~~~-~v~F~~vd~~~q~~~~----~~f~~~~~~~~~~~~l 1159 (1578)
.+..+. .++.+++++.+ +.++.+...+.|+++|++ |+++ .+.|+|+|++.++..+ +.| ++..++
T Consensus 239 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~--~~~~~ki~F~~id~~~~~~~l~~~~~~f-------gl~~~~ 309 (367)
T 3us3_A 239 YETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQD--NTDNPDLSIIWIDPDDFPLLVPYWEKTF-------DIDLSA 309 (367)
T ss_dssp HHHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHHHH--TTTCTTCCEEEECGGGCTTTHHHHHHHH-------TCCTTS
T ss_pred HHHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHHHH--cCCCCceEEEEECCccchhHHHHHHHhc-------CCCCCC
Confidence 776542 23344555554 444567888899999999 9885 5999999998887544 346 222468
Q ss_pred eEEEEEcCCcc--eEeeccCCcccccccccccHHHHHHHhhhhhcCCcc
Q psy12972 1160 AAMWRMDYKKI--KYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 1206 (1578)
Q Consensus 1160 p~l~~~n~~~~--kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~~ 1206 (1578)
|++++.|.++. +|..+++. ...+|.+.|..||+.+++|...
T Consensus 310 P~~~i~~~~~~~~~~y~~~~~------~~~~t~~~i~~F~~~~~~Gkl~ 352 (367)
T 3us3_A 310 PQIGVVNVTDADSVWMEMDDE------EDLPSAEELEDWLEDVLEGEIN 352 (367)
T ss_dssp CEEEEEETTTCCEEECCCCTT------SCCCCHHHHHHHHHHHHHTSSC
T ss_pred CeEEEEecccccceeecCCcc------cccCCHHHHHHHHHHHHcCCcC
Confidence 88888887764 33334331 1257999999999999999988
|
| >1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=312.44 Aligned_cols=318 Identities=16% Similarity=0.179 Sum_probs=254.2
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHH-------HHHHHHHhCCCceEEEEEECccchhhHhHcCcc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPI-------FKKLMDELSPLGVGFFTVHVHNEQGLARRLGVG 927 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~-------~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~ 927 (1578)
++++|.+||++.+ ..+++++|.||||||+ |+.++|. |+++|+.+++.++.+++|||+.++++|++|+|+
T Consensus 13 v~~l~~~~f~~~i---~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~ 88 (350)
T 1sji_A 13 VVSLTEKNFKQVL---KKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFD 88 (350)
T ss_dssp CEEECHHHHHHHH---TTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCC
T ss_pred cEECCHHHHHHHH---hhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCC
Confidence 4579999999977 4478999999999999 9999999 999999998766999999999999999999999
Q ss_pred ccCCcEEEEcCCccccccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhh-cccCCCcEEEEEeccCCchHHHHHHH
Q psy12972 928 SQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLD-NWREDNKVHALLFQRSLPVRLRYLIN 1006 (1578)
Q Consensus 928 ~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~-~~~~~~~~~VlfF~~~~~~~~~~~~~ 1006 (1578)
+ +||+++|++|+.. .+.|.++.+.|++|+.+.+++++..+.+.++++++++ +. +.++|+||.+..++....+..
T Consensus 89 ~-~Pt~~~~~~g~~~-~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~---~~~vv~ff~~~~~~~~~~~~~ 163 (350)
T 1sji_A 89 E-EGSLYVLKGDRTI-EFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIED---QIKLIGFFKSEESEYYKAFEE 163 (350)
T ss_dssp S-TTEEEEEETTEEE-EECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCS---SCEEEEECSCTTSHHHHHHHH
T ss_pred c-cceEEEEECCcEE-EecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCC---CcEEEEEECCCCcHHHHHHHH
Confidence 8 9999999999854 4569999999999999999887666657788999987 54 667888887766665555544
Q ss_pred -HhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCC-CCchhhhhhhhcCCCCCCcccCch
Q psy12972 1007 -AFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNS-IPVPTLQDITDNNPYLTLPRISSQ 1084 (1578)
Q Consensus 1007 -a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~-l~~~~L~~fI~~nk~p~vpeLts~ 1084 (1578)
|..+++++.|+.+ .+++++++++++ .|++++|+...+.+..+ .++ .+...|.+|++.+.+|.++++|.+
T Consensus 164 ~A~~~~~~~~f~~~-----~~~~~~~~~~v~--~p~i~~~~~~~~~~~~y--~g~~~~~~~l~~fi~~~~~p~v~elt~~ 234 (350)
T 1sji_A 164 AAEHFQPYIKFFAT-----FDKGVAKKLSLK--MNEVDFYEPFMDEPIAI--PDKPYTEEELVEFVKEHQRPTLRRLRPE 234 (350)
T ss_dssp HHHHTTTTSEEEEE-----CCHHHHHHHTCC--TTCEEEECTTCSSCEEC--SSSSCCHHHHHHHHHHHCCCSEEECCTT
T ss_pred HHHhhccCcEEEEE-----CCHHHHHHcCCC--CCcEEEEeCCCCCceec--CCCCCCHHHHHHHHHHcCccchhhcChh
Confidence 4467789999999 678899999997 58999997654555433 333 677889999999999999999999
Q ss_pred hhhhhcCCC-CceEEEEEecC-CcchHHHHHHHHHHHhhccCCC-CcEEEEEEecCcchHHH----HhccCCCCCCcccc
Q psy12972 1085 SMLDAVCPV-KKLCVVLFSED-SPEHDASRHTLRRFAQESRFVH-NNIAFMYVFIEKQPEFV----NALTSPEDSSEISL 1157 (1578)
Q Consensus 1085 ~~~~~~c~~-~~lcVll~~~~-~~~~~~~~~~lr~vA~~~~~~~-~~v~F~~vd~~~q~~~~----~~f~~~~~~~~~~~ 1157 (1578)
+..+..-.. +++|++++... ..+.....+.|+++|++ +++ +.+.|+|+|++.++.++ +.| +...
T Consensus 235 ~~~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~--~~~~~~~~f~~id~~~~~~~~~~~~~~~-------gi~~ 305 (350)
T 1sji_A 235 DMFETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVARD--NTDNPDLSIVWIDPDDFPLLVAYWEKTF-------KIDL 305 (350)
T ss_dssp THHHHHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHH--GGGCSSCCEEEECGGGCHHHHHHHHHHC-------CSCT
T ss_pred hHHHHhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHH--hCCCCceEEEEECchhhHHHHHHHHhhc-------CCCc
Confidence 886643211 26788887643 23346788999999999 874 45999999999888877 666 2223
Q ss_pred ceeEEEEEcCCc-ceEee-ccCCcccccccccccHHHHHHHhhhhhcCCc
Q psy12972 1158 HIAAMWRMDYKK-IKYGW-LLGDAVDDWKDYNTTKDRLDAGLRSLVNDPY 1205 (1578)
Q Consensus 1158 ~lp~l~~~n~~~-~kY~~-l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~ 1205 (1578)
++|++++.|.++ .+|.. +.+. ....|.+.|..||+.+++|..
T Consensus 306 ~~P~~~i~~~~~~~~~~~~~~~~------~~~~~~~~i~~F~~d~~~Gkl 349 (350)
T 1sji_A 306 FKPQIGVVNVTDADSVWMEIPDD------DDLPTAEELEDWIEDVLSGKI 349 (350)
T ss_dssp TSCEEEEEESSSSCEEESCSSCC------SCCCCHHHHHHHHHHHHTSCC
T ss_pred cCCcEEEEecccccccccCCCcc------cccCCHHHHHHHHHHHhcCcc
Confidence 579998888755 47864 3321 235788999999999999974
|
| >2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.5e-30 Score=308.94 Aligned_cols=329 Identities=13% Similarity=0.122 Sum_probs=230.9
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCC-----CceEEEEEECccchhhHhHcCcccc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP-----LGVGFFTVHVHNEQGLARRLGVGSQ 929 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~-----~~v~~a~VDc~~~~~L~~k~gV~~~ 929 (1578)
++.||.++|++.+ ..+++++|.||||||+||+++.|.|+++|+.+++ .++.+++|||+.+.++|++|+|++
T Consensus 7 v~~l~~~~f~~~~---~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~- 82 (382)
T 2r2j_A 7 ITSLDTENIDEIL---NNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISK- 82 (382)
T ss_dssp -CBCCTTTHHHHH---HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCE-
T ss_pred eEECCHHHHHHHH---hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCc-
Confidence 5679999999866 3468999999999999999999999999999952 239999999999999999999998
Q ss_pred CCcEEEEcCCcccc-ccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEeccCCchHHHHHHH-H
Q psy12972 930 LPQIALLTDGRTSF-FKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN-A 1007 (1578)
Q Consensus 930 ~PTl~lf~~G~~~~-y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~-a 1007 (1578)
+||+++|++|+... .+.|.++.+.|++|+.+.+++++..+.+.++++. +... ..++|+||.+...+....+.. |
T Consensus 83 ~Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~---~~~~v~ff~~~~~~~~~~f~~~A 158 (382)
T 2r2j_A 83 YPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRS---KRNIIGYFEQKDSDNYRVFERVA 158 (382)
T ss_dssp ESEEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC----------------CCEEEEEESCSSSHHHHHHHHHH
T ss_pred CCEEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCC---CCEEEEEECCCCChhHHHHHHHH
Confidence 99999999998764 3669999999999999999877655555667777 5443 667888998777776644444 4
Q ss_pred hhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCC-CchhhhhhhhcCCCCCCcccCchhh
Q psy12972 1008 FKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSI-PVPTLQDITDNNPYLTLPRISSQSM 1086 (1578)
Q Consensus 1008 ~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l-~~~~L~~fI~~nk~p~vpeLts~~~ 1086 (1578)
..+++++.|+.+.. ++.++++++. .| ++|+............+.+ +...|.+||+.+.+|.++++|.++.
T Consensus 159 ~~~~~~~~F~~~~~------~~~~~~~v~~-~p--i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~ 229 (382)
T 2r2j_A 159 NILHDDCAFLSAFG------DVSKPERYSG-DN--IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVPLVREITFENG 229 (382)
T ss_dssp HHHTTTCEEEEEES------CC---------CE--EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSCSSEECCHHHH
T ss_pred HHhhccceEEEEeh------hhHHhhCCCC-Cc--eEECCCCCCCcCcccCCCCCCHHHHHHHHHhcccCceEecChhhH
Confidence 56778899988832 4677788875 35 4554432222222334555 6778999999999999999999999
Q ss_pred hhhcCCCCceEEEEEecCC-cchHHHHHHHHHHHhhccCCCCcEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEE
Q psy12972 1087 LDAVCPVKKLCVVLFSEDS-PEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRM 1165 (1578)
Q Consensus 1087 ~~~~c~~~~lcVll~~~~~-~~~~~~~~~lr~vA~~~~~~~~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~ 1165 (1578)
.+..|....+|++++..+. +..+...+.+.++|.+ ++++ +.|+|+|++.++.+++.|..+. .++|++++.
T Consensus 230 ~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~--~~~~-i~f~~id~~~~~~~~~~~gl~~------~~~P~i~i~ 300 (382)
T 2r2j_A 230 EELTEEGLPFLILFHMKEDTESLEIFQNEVARQLIS--EKGT-INFLHADCDKFRHPLLHIQKTP------ADCPVIAID 300 (382)
T ss_dssp HHHHTTCCCEEEEEECTTCCHHHHHHHHHHHHHTGG--GTTT-SEEEEEETTTTHHHHHHTTCCG------GGCSEEEEE
T ss_pred HHHhcCCCcEEEEEecCCchHHHHHHHHHHHHHHHH--hCCe-eEEEEEchHHhHHHHHHcCCCc------cCCCEEEEE
Confidence 8888866678877776543 2234555667777777 7664 9999999999999999883322 367888888
Q ss_pred cCCcceEeeccCCcccccccccccHHHHHHHhhhhhcCCcccccccccccccccchhhhh
Q psy12972 1166 DYKKIKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTALKEISDEYIQSL 1225 (1578)
Q Consensus 1166 n~~~~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~~~l~~~~~lp~l~dE~~~~~ 1225 (1578)
+..+ .|..... ...++.+.|..||+.+++|... |.+.+|..|..
T Consensus 301 ~~~~-~y~~~~~-------~~~~~~~~i~~F~~d~~~Gkl~--------p~~kse~~P~~ 344 (382)
T 2r2j_A 301 SFRH-MYVFGDF-------KDVLIPGKLKQFVFDLHSGKLH--------REFHHGPDPTD 344 (382)
T ss_dssp CSSC-EEECCCS-------GGGGSTTHHHHHHHHHHHTTTS--------SCC--------
T ss_pred cchh-cCCCCcc-------ccccCHHHHHHHHHHHHCCCcc--------ccccCCCCCCC
Confidence 8644 3532211 1134668899999999999998 66666655543
|
| >3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=307.67 Aligned_cols=395 Identities=14% Similarity=0.215 Sum_probs=298.6
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++.||.++|++.+...+.+++++|.||||||++|+++.|.|+++|+.+++. +.+++|||+.++++|++|+|++ +||++
T Consensus 3 v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~~~~l~~~~~v~~-~Ptl~ 80 (481)
T 3f8u_A 3 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTANTNTCNKYGVSG-YPTLK 80 (481)
T ss_dssp CEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTTCHHHHHHTTCCE-ESEEE
T ss_pred eEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCCCHHHHHhcCCCC-CCEEE
Confidence 467999999998854444599999999999999999999999999999987 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEeccCCchHHHHHHH-HhhcCCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN-AFKHRTT 1013 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~-a~~~~~~ 1013 (1578)
+|++|+....+.|.++.+.|++|+.+++++++..+.+.++++++++.. +.++++||.+..+.....+.. |..++++
T Consensus 81 ~~~~g~~~~~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~vv~~~~~~~~~~~~~f~~~a~~~~~~ 157 (481)
T 3f8u_A 81 IFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDK---DASIVGFFDDSFSEAHSEFLKAASNLRDN 157 (481)
T ss_dssp EEETTEEEEECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHTTSS---SCEEEEEESCTTCHHHHHHHHHHHHHTTT
T ss_pred EEeCCceeeeecCccCHHHHHHHHHhhcccCceecCCHHHHHHHHhcC---CcEEEEEECCCccchHHHHHHHHHHhccC
Confidence 999998777777999999999999999988877777888999999875 777888897666666555554 4467799
Q ss_pred eEEEEEEcccCCChhHHhhcCCCCCCcEEEEecc------CCCCCccccccCCCCchhhhhhhhcCCCCCCcccCchhhh
Q psy12972 1014 IVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKE------DKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSML 1087 (1578)
Q Consensus 1014 v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~------~~~~~~~~l~~~~l~~~~L~~fI~~nk~p~vpeLts~~~~ 1087 (1578)
+.|+.+ .+..++++|+++. +.+++|+. ..+.+..+ ..+.++...|.+||..+++|+++++|.++..
T Consensus 158 ~~F~~~-----~~~~~~~~~~v~~--~~i~~~~p~~~~~~~~~~~~~y-~~~~~~~~~l~~fi~~~~~p~v~e~t~~n~~ 229 (481)
T 3f8u_A 158 YRFAHT-----NVESLVNEYDDNG--EGIILFRPSHLTNKFEDKTVAY-TEQKMTSGKIKKFIQENIFGICPHMTEDNKD 229 (481)
T ss_dssp SCEEEE-----CCHHHHHHHCSSS--EEEEEECCGGGCBTTBCSEEEC-CCSSCCHHHHHHHHHHHTTTTSCEECTTTHH
T ss_pred ceEEEE-----CCHHHHHHhCCCC--CcEEEEecccccCccCCccccc-CCCCCCHHHHHHHHHHhCCCCccccChhHHH
Confidence 999999 7889999999975 45888872 12222222 2256677899999999999999999999876
Q ss_pred hhcCCCCceEEEEEecCCcch----HHHHHHHHHHHhhccCCCC--cEEEEEEecCcchHHHHhccCCCCCCccccceeE
Q psy12972 1088 DAVCPVKKLCVVLFSEDSPEH----DASRHTLRRFAQESRFVHN--NIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAA 1161 (1578)
Q Consensus 1088 ~~~c~~~~lcVll~~~~~~~~----~~~~~~lr~vA~~~~~~~~--~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~ 1161 (1578)
... ...++++++..+.... +...+.++++|++ |+++ .+.|+|+|.+.....++.|.... ...++|.
T Consensus 230 ~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~--~~~k~~~i~F~~~D~~~~~~~l~~~gl~~----~~~~~P~ 301 (481)
T 3f8u_A 230 LIQ--GKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKK--FLDAGHKLNFAVASRKTFSHELSDFGLES----TAGEIPV 301 (481)
T ss_dssp HHT--TSSEEEEEECCCTTTCHHHHHHHHHHHHHHHHH--HHHTTCCCEEEEEETTTTHHHHGGGTCCC----CTTCSCE
T ss_pred Hhc--CCCceEEEEecccccchhhHHHHHHHHHHHHHH--hcCCCceEEEEEEcHHHHHHHHHHcCCCc----ccCCCcE
Confidence 654 3456666654332222 2357889999999 7654 39999999999999888884331 0136888
Q ss_pred EEEEcCCcceEeeccCCcccccccccccHH--HHHHHhhhhhcCCcccccccccccccccchhhhhHHHHHHHHHHHHHH
Q psy12972 1162 MWRMDYKKIKYGWLLGDAVDDWKDYNTTKD--RLDAGLRSLVNDPYNNLLYDTALKEISDEYIQSLGVRIFNRIFMHIEM 1239 (1578)
Q Consensus 1162 l~~~n~~~~kY~~l~~~~~~~~~~~~~t~e--~l~~fL~~ll~g~~~~l~~~~~lp~l~dE~~~~~~~R~~~~~~~~~~~ 1239 (1578)
+++.+.++.+|.+ ++ .+|.+ .|..|++.+++|... |.+.++..|..
T Consensus 302 ~~i~~~~~~ky~~-~~---------~~t~e~~~l~~f~~~~~~g~~~--------~~~~s~~~p~~-------------- 349 (481)
T 3f8u_A 302 VAIRTAKGEKFVM-QE---------EFSRDGKALERFLQDYFDGNLK--------RYLKSEPIPES-------------- 349 (481)
T ss_dssp EEEECSSSCEEEC-CS---------CCCTTSHHHHHHHHHHHHTCCC--------CCCCCCCCCSC--------------
T ss_pred EEEEcCCCcccCC-Cc---------ccCccHHHHHHHHHHHhcCCcc--------cccccCCCCCC--------------
Confidence 8888866678864 33 24556 899999999999988 55555555511
Q ss_pred HHHhhccccchhHHHHHHHHHHHHHHHHHHHHhcccccccCCCccccccccccccccccccccccceeeeeeccccccee
Q psy12972 1240 AQQSLSRQHILPAVSLIFTVIIIVVLAMIMNHYMKLEEEEIPSTTSSMRNHSVNKEKKHKETKQELKLHALRAETYNGLV 1319 (1578)
Q Consensus 1240 ~~~~~~~~~~l~~~s~~~~~~fi~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~y~~~~ 1319 (1578)
. .-.+..|++.+++..+
T Consensus 350 -------~--------------------------------------------------------~~~v~~~~~~~~~~~~ 366 (481)
T 3f8u_A 350 -------N--------------------------------------------------------DGPVKVVVAENFDEIV 366 (481)
T ss_dssp -------C--------------------------------------------------------CSSSEEECTTTHHHHH
T ss_pred -------C--------------------------------------------------------CCCeEEecccCHHHHh
Confidence 0 0026677777777766
Q ss_pred eecCCCceEEEEEE--cccchHHhHHHHhhceecccccceeeeEEEEecc
Q psy12972 1320 VLLKPGCRTLILFI--DNKSSRKLVSKFHAMVWPYRKNKSLMFGYLNIER 1367 (1578)
Q Consensus 1320 ~~lkpg~~~~vl~~--~~~s~~~ll~~f~~~v~~~~~~~~l~f~~l~~~k 1367 (1578)
. .+|.-.+|.+- .......+.+.+.+.---|.+...+.|..++.+.
T Consensus 367 ~--~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~ 414 (481)
T 3f8u_A 367 N--NENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATA 414 (481)
T ss_dssp T--CTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTS
T ss_pred h--cCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCc
Confidence 3 34443333333 2335577777776665556666678888888877
|
| >3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=282.02 Aligned_cols=204 Identities=26% Similarity=0.485 Sum_probs=165.2
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCCCCc
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDSASR 715 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~~~~ 715 (1578)
.|+|++|||+++||.++||+|||+++++||||+++ ++.+.++|++|++||++|+||.+|+.||.+|..+.....
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~~----- 76 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ----- 76 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTTC-----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccccc-----
Confidence 58999999999999999999999999999999996 678999999999999999999999999999876432111
Q ss_pred ccCCCCCCCcccccccCCCCCCcccccchhhccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhc
Q psy12972 716 NFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELS 795 (1578)
Q Consensus 716 ~~~~~~~~~f~~~F~~~Fg~~f~~~~~~~~~k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk 795 (1578)
+..+..| .+|.+.||
T Consensus 77 ---~~~~~~~-~~~~~~fg------------------------------------------------------------- 91 (210)
T 3apq_A 77 ---GGQYESW-SYYRYDFG------------------------------------------------------------- 91 (210)
T ss_dssp ---SCCCCCH-HHHHHSSS-------------------------------------------------------------
T ss_pred ---ccccccc-cccccccc-------------------------------------------------------------
Confidence 0111111 11111110
Q ss_pred CCCcceeeeeecccCccccccCCccccccccccccCccccccccccccCccCcccceeEEEeeccccccceecccCCCCc
Q psy12972 796 PLGVGFFTVHYDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEKNYIPKSYTTP 875 (1578)
Q Consensus 796 ~~~vg~v~~~~~~~~~~~~i~g~~~~~~~~~~i~~~Ptiklf~~~~~~~~~~~~i~~~~vi~Lt~~nF~~~vl~~s~~~~ 875 (1578)
++.... .+..++.++|...+ ..+++
T Consensus 92 ----------------------------------------~~~~~~------------~v~~l~~~~f~~~~---~~~~~ 116 (210)
T 3apq_A 92 ----------------------------------------IYDDDP------------EIITLERREFDAAV---NSGEL 116 (210)
T ss_dssp ----------------------------------------TTTTCT------------TSEECCHHHHHHHH---HHSCC
T ss_pred ----------------------------------------ccCCCC------------ceEEecHHHHHHHH---ccCCc
Confidence 000000 02357788888876 34789
Q ss_pred EEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHH
Q psy12972 876 HLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMV 955 (1578)
Q Consensus 876 ~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~ 955 (1578)
++|.||++||++|+.+.|.|+++++.+.+. +.|+.|||+.++++|++|+|.+ +||+++|++|+....+.|.++.++|.
T Consensus 117 vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~-~Pt~~~~~~G~~~~~~~G~~~~~~l~ 194 (210)
T 3apq_A 117 WFVNFYSPGCSHCHDLAPTWREFAKEVDGL-LRIGAVNCGDDRMLCRMKGVNS-YPSLFIFRSGMAAVKYNGDRSKESLV 194 (210)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEEEEETTTCHHHHHHTTCCS-SSEEEEECTTSCCEECCSCCCHHHHH
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHHhcCc-eEEEEEECCccHHHHHHcCCCc-CCeEEEEECCCceeEecCCCCHHHHH
Confidence 999999999999999999999999999875 9999999999999999999998 99999999999877778999999999
Q ss_pred HHHHhhCCCccc
Q psy12972 956 EFFRLKLPYKLI 967 (1578)
Q Consensus 956 ~fi~~~lp~~vv 967 (1578)
+|+.+.+++.+.
T Consensus 195 ~~i~~~l~~~~~ 206 (210)
T 3apq_A 195 AFAMQHVRSTVT 206 (210)
T ss_dssp HHHHHHHHCCSS
T ss_pred HHHHHhCcccce
Confidence 999998876543
|
| >2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-27 Score=296.82 Aligned_cols=316 Identities=13% Similarity=0.150 Sum_probs=242.1
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++.+|.++|++.+ +.+++++|.||||||+||+++.|.|+++|+.+++.++.+++|||+.++++|++|+|++ +||++
T Consensus 16 v~~l~~~~f~~~~---~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~-~Pt~~ 91 (504)
T 2b5e_A 16 VVKLATDSFNEYI---QSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPG-FPSLK 91 (504)
T ss_dssp CEECCTTTHHHHH---TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred cEECCHHHHHHHH---hcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCc-CCEEE
Confidence 5579999999976 4578999999999999999999999999999987669999999999999999999998 99999
Q ss_pred EEcCCcc--ccccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCC--cEEEEEeccCCchHH-HHHHHHhh
Q psy12972 935 LLTDGRT--SFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDN--KVHALLFQRSLPVRL-RYLINAFK 1009 (1578)
Q Consensus 935 lf~~G~~--~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~--~~~VlfF~~~~~~~~-~~~~~a~~ 1009 (1578)
+|++|+. ...+.|.++.+.|.+|+.+.+++++.. ++. +++|++.. + .++|+||.+..+... .+...|..
T Consensus 92 ~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~~~~v~~-i~~--~~~~~~~~---~~~~~~v~~f~~~~~~~~~~f~~~A~~ 165 (504)
T 2b5e_A 92 IFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQPAVAV-VAD--LPAYLANE---TFVTPVIVQSGKIDADFNATFYSMANK 165 (504)
T ss_dssp EEETTCTTCEEECCSCCSHHHHHHHHHHHTSCSEEE-CSC--HHHHHHHS---CCSSCEEEEEESCCHHHHHHHHHHHHH
T ss_pred EEeCCccccceeecCCCCHHHHHHHHHHhcCCccee-HHH--HHHHHhcC---CCceEEEEEeCCCCchHHHHHHHHHHH
Confidence 9999986 666679999999999999999876444 444 89999875 5 788999987554444 44445557
Q ss_pred cCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCC-C---CchhhhhhhhcCCCCCCcccCchh
Q psy12972 1010 HRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNS-I---PVPTLQDITDNNPYLTLPRISSQS 1085 (1578)
Q Consensus 1010 ~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~-l---~~~~L~~fI~~nk~p~vpeLts~~ 1085 (1578)
+++.+.|+++. +++++++++ +++|+... .+..+ .+. + +...|.+||..+.+|.++++|.++
T Consensus 166 ~~~~~~F~~~~-------~~~~~~~~~-----i~l~~~~~-~~~~~--~g~~~~~~~~~~l~~fi~~~~~p~v~~~t~~~ 230 (504)
T 2b5e_A 166 HFNDYDFVSAE-------NADDDFKLS-----IYLPSAMD-EPVVY--NGKKADIADADVFEKWLQVEALPYFGEIDGSV 230 (504)
T ss_dssp TTTTCEEEEEE-------CTTSCCEEE-----EEETTEEE-EEEEC--CSCHHHHTSHHHHHHHHHHHSSCSSCBCCHHH
T ss_pred hhcCcEEEEEH-------HHHHhcCCe-----EEecCCCC-ccccc--CCcccccCCHHHHHHHHHhcccCCcccCCHhH
Confidence 88999999983 466777763 77776532 22222 233 3 667899999999999999999988
Q ss_pred hhhhcCCCCceEEEEEecCCcchHHHHHHHHHHHhhccCCCCcEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEE
Q psy12972 1086 MLDAVCPVKKLCVVLFSEDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRM 1165 (1578)
Q Consensus 1086 ~~~~~c~~~~lcVll~~~~~~~~~~~~~~lr~vA~~~~~~~~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~ 1165 (1578)
+..... .+...++++.......+.....++++|++ ++++ +.|+|+|.+.++++++.|.. . .++|.+++.
T Consensus 231 ~~~~~~-~~~~~~~l~~~~~~~~~~~~~~l~~~a~~--~~~~-i~F~~id~~~~~~~~~~~gl-~------~~~P~v~i~ 299 (504)
T 2b5e_A 231 FAQYVE-SGLPLGYLFYNDEEELEEYKPLFTELAKK--NRGL-MNFVSIDARKFGRHAGNLNM-K------EQFPLFAIH 299 (504)
T ss_dssp HHHHHH-TTSCEEEEEESSHHHHHHHHHHHHHHHHH--TTTT-CEEEEEEHHHHTTHHHHTTC-C------SCSSEEEEE
T ss_pred HHHHhc-CCCcEEEEEecCcccHHHHHHHHHHHHHh--cCCe-eEEEEEehhhhHHHHHHcCC-c------ccCCEEEEE
Confidence 765543 33333333333333446788899999999 8876 99999999999999998843 2 467888888
Q ss_pred cCCc-ceEeecc-CCcc--cccccccccHHHHHHHhhhhhcCCcc
Q psy12972 1166 DYKK-IKYGWLL-GDAV--DDWKDYNTTKDRLDAGLRSLVNDPYN 1206 (1578)
Q Consensus 1166 n~~~-~kY~~l~-~~~~--~~~~~~~~t~e~l~~fL~~ll~g~~~ 1206 (1578)
+..+ .+|.+.. +++. ..-....+|.+.|..|++.++.|...
T Consensus 300 ~~~~~~ky~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~ 344 (504)
T 2b5e_A 300 DMTEDLKYGLPQLSEEAFDELSDKIVLESKAIESLVKDFLKGDAS 344 (504)
T ss_dssp ETTTTEEEECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHHHTCCC
T ss_pred eCCcCcccCCCCCccchhhccccccccCHHHHHHHHHHHHcCCCC
Confidence 8744 6786432 1100 00011236889999999999999887
|
| >3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.7e-25 Score=290.83 Aligned_cols=296 Identities=14% Similarity=0.161 Sum_probs=210.7
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|+.. .+++++|.||||||+||+++.|.|+++|+.+++. +.++.++.+. +|...++.+
T Consensus 444 ~l~~~~~~~~-----~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~-v~~~~vd~~~~~~~~~~~~v~~-------- 509 (780)
T 3apo_A 444 TLGPQNFPAS-----DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQ-LKVGTLDCTIHEGLCNMYNIQA-------- 509 (780)
T ss_dssp ECCTTTSCTT-----CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCS--------
T ss_pred ecCHHHHHHc-----CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEeCCCCHHHHHHcCCCc--------
Confidence 4455566554 5789999999999999999999999999999753 3333333222 444444444
Q ss_pred cccccCccccccccccccCccC----ccccee-------EEEeeccccccceecccCCCCcEEEEEEcCCCcccccccHH
Q psy12972 826 HNHMYNPFDDVFSEGFNFPFEE----HDISLF-------HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPI 894 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~~~~~~~~----~~i~~~-------~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~ 894 (1578)
+|++.++..+....+.+ +.+..+ .+..++.++|++.+...+.+.+|+|.||+|||+||+++.|.
T Consensus 510 -----~Pt~~~~~~g~~~~~~g~~~~~~l~~fi~~~~~~~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~ 584 (780)
T 3apo_A 510 -----YPTTVVFNQSSIHEYEGHHSAEQILEFIEDLRNPSVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPE 584 (780)
T ss_dssp -----SSEEEEEETTEEEEECSCSCHHHHHHHHHHHHSCSEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHH
T ss_pred -----CCeEEEEcCCceeeecCcccHHHHHHHHHhhcccceeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHH
Confidence 48877776543222222 222221 34678899999988665557899999999999999999999
Q ss_pred HHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCcc----ccccCC-CCCHHHHHHHHHhhCCCccccc
Q psy12972 895 FKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRT----SFFKEP-SFSVQKMVEFFRLKLPYKLIVP 969 (1578)
Q Consensus 895 ~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~----~~y~~G-~~s~~~L~~fi~~~lp~~vv~~ 969 (1578)
|+++|+.+++. +.|++|||+.+..+|++++|++ ||||++|+.|.. ...|.| .++.++|.+|+.+.+++. +..
T Consensus 585 ~~~lA~~~~~~-v~~~~vd~~~~~~l~~~~~v~~-~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~~-v~~ 661 (780)
T 3apo_A 585 WKRMARTLTGL-INVGSVDCGQYHSFCTQENVQR-YPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQA-SID 661 (780)
T ss_dssp HHHHHHHHTTT-SEEEEEETTTTHHHHHHTTCCS-SSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCCC-SEE
T ss_pred HHHHHHHhhCC-eEEEEEECcchHHHHHHcCCCC-CCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhcccc-ccc
Confidence 99999999985 9999999999999999999998 999999987653 233468 899999999999998765 455
Q ss_pred cccccHHHHhhcccCCCcEEEEEeccCCchHHHH-----HHHHhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEE
Q psy12972 970 LSATNVDAFLDNWREDNKVHALLFQRSLPVRLRY-----LINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLI 1044 (1578)
Q Consensus 970 it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~-----~~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllv 1044 (1578)
++.+++++.+... ++++++.|.....++... ...+..+.+++.|+.+++ ..+..++++|+|.+ .|++++
T Consensus 662 l~~~~~~~~~~~~---~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~vd~--~~~~~~~~~~~v~~-~Pt~~~ 735 (780)
T 3apo_A 662 LTPQTFNEKVLQG---KTHWVVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDC--QAYPQTCQKAGIKA-YPSVKL 735 (780)
T ss_dssp ECHHHHHHHTTTC---SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEET--TTCHHHHHHTTCCS-SSEEEE
T ss_pred CCHHHHHHHHhcC---CCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCceEEEEEC--CCCHHHHHhcCCCc-CCEEEE
Confidence 6778887655443 555666663333222211 122334556788888855 46788999999986 579999
Q ss_pred eccCCCCCcccccc--CCCCchhhhhhhhcC
Q psy12972 1045 FKEDKDRPSASITM--NSIPVPTLQDITDNN 1073 (1578)
Q Consensus 1045 fk~~~~~~~~~l~~--~~l~~~~L~~fI~~n 1073 (1578)
|+++.... .+... +..+...+.+|++..
T Consensus 736 ~~~g~~~~-~~~G~~~g~~~~~~l~~~l~~~ 765 (780)
T 3apo_A 736 YQYERAKK-SIWEEQINSRDAKTIAALIYGK 765 (780)
T ss_dssp EEEETTTT-EEEEEEECCCCHHHHHHHHHHH
T ss_pred EcCCCccc-cccCcccCCcCHHHHHHHHHHH
Confidence 96543321 11111 245667788888765
|
| >3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-24 Score=244.54 Aligned_cols=197 Identities=22% Similarity=0.373 Sum_probs=153.1
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCC--cceeeeeecc---cCccccccCCcccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG--VGFFTVHYDL---FGTTDGFSGQDSAS 822 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~--vg~v~~~~~~---~~~~~~i~g~~~~~ 822 (1578)
..++..+|+..+ .++++++|.||||||++|+++.|.|+++++.+++.+ +.++.++.+. +|+..++.+.
T Consensus 18 ~~l~~~~~~~~~---~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~---- 90 (241)
T 3idv_A 18 LVLNDANFDNFV---ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGY---- 90 (241)
T ss_dssp EEECTTTHHHHH---TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSS----
T ss_pred EEecccCHHHHH---hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcC----
Confidence 456667888776 346899999999999999999999999999998764 4444443332 4455555444
Q ss_pred ccccccccCccccccccccccCccC----cccce--------------eEEEeeccccccceecccCCCCcEEEEEEcCC
Q psy12972 823 RNFHNHMYNPFDDVFSEGFNFPFEE----HDISL--------------FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDW 884 (1578)
Q Consensus 823 ~~~~~i~~~Ptiklf~~~~~~~~~~----~~i~~--------------~~vi~Lt~~nF~~~vl~~s~~~~~LV~Fyapw 884 (1578)
||+.++..|-...+.+ ..+.. ..+..++.++|++.+ ..+++++|.||++|
T Consensus 91 ---------Pt~~~~~~g~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~f~a~w 158 (241)
T 3idv_A 91 ---------PTIKILKKGQAVDYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVV---NDADIILVEFYAPW 158 (241)
T ss_dssp ---------SEEEEEETTEEEECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHH---HHCSEEEEEEECTT
T ss_pred ---------CEEEEEcCCCcccccCcccHHHHHHHHhhccCcccccccccceeccHHHHHHhh---ccCCeEEEEEECCC
Confidence 8877776543222222 11111 123468888998876 34679999999999
Q ss_pred CcccccccHHHHHHHHHhCCCc--eEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 885 CFACLQVEPIFKKLMDELSPLG--VGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 885 Cg~Ck~l~p~~~~lA~~l~~~~--v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|++|+.+.|.|.++|+.+.+.+ +.++.|||+.++++|++|+|.+ +||+++|++|+.+. +.|.++.++|.+|+.+++
T Consensus 159 C~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~-~Pt~~~~~~g~~~~-~~g~~~~~~l~~~l~~~~ 236 (241)
T 3idv_A 159 CGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSG-YPTLKIFRKGRPYD-YNGPREKYGIVDYMIEQS 236 (241)
T ss_dssp CTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCS-SSEEEEEETTEEEE-CCSCCSHHHHHHHHHHHT
T ss_pred CHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcc-cCEEEEEECCeEEE-ecCCCCHHHHHHHHHhhh
Confidence 9999999999999999986543 9999999999999999999998 99999999998877 569999999999999988
Q ss_pred CCc
Q psy12972 963 PYK 965 (1578)
Q Consensus 963 p~~ 965 (1578)
.+.
T Consensus 237 ~~~ 239 (241)
T 3idv_A 237 GAA 239 (241)
T ss_dssp TCT
T ss_pred CCC
Confidence 653
|
| >3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-22 Score=237.01 Aligned_cols=226 Identities=17% Similarity=0.219 Sum_probs=181.7
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc--cchhhHhHcCccccCCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH--NEQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~--~~~~L~~k~gV~~~~PT 932 (1578)
+++||.++|++.+.. .+++++|.|||+||++|+.+.|.|+++++.+.+. +.++.|||+ .+.++|++|+|.+ +||
T Consensus 19 vv~lt~~~f~~~i~~--~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~~~~~~l~~~~~I~~-~Pt 94 (298)
T 3ed3_A 19 ISELTPKSFDKAIHN--TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDLNKNKALCAKYDVNG-FPT 94 (298)
T ss_dssp CEECCHHHHHHHHTS--SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTSTTTHHHHHHTTCCB-SSE
T ss_pred eEEeCHHHHHHHHHh--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccCccCHHHHHhCCCCc-cce
Confidence 568999999998843 4789999999999999999999999999999876 999999998 6789999999998 999
Q ss_pred EEEEcCCc-----------------cccccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEecc
Q psy12972 933 IALLTDGR-----------------TSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQR 995 (1578)
Q Consensus 933 l~lf~~G~-----------------~~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~ 995 (1578)
+++|++|+ ....|.|.++.+.|++|+.+++++.+..+.+.+++++|++.. +.+.|++|++
T Consensus 95 ~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~---~~~~vi~fs~ 171 (298)
T 3ed3_A 95 LMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKS---PKLSVVLFSK 171 (298)
T ss_dssp EEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSC---SSEEEEEEES
T ss_pred EEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcC---CceEEEEEcC
Confidence 99999886 244567999999999999999988777766778899999875 6788888987
Q ss_pred CCchHHHHHHHHhhcCCCeEEEEEEcccCCChhHHhhcC-----C------------CCCCcEEEEeccCCCCCcccccc
Q psy12972 996 SLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFK-----V------------PGDKDSLLIFKEDKDRPSASITM 1058 (1578)
Q Consensus 996 ~~~~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~-----V------------~~~~Ptllvfk~~~~~~~~~l~~ 1058 (1578)
.......+...|..+++++.|+.+.........-.++++ | ....|+|++|+...+++..+-.
T Consensus 172 ~~~~~~~f~~~A~~~~~~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~g- 250 (298)
T 3ed3_A 172 QDKISPVYKSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYEG- 250 (298)
T ss_dssp SSSCCHHHHHHHHHTBTTEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECCC-
T ss_pred CCcchHHHHHHHHHhhcCcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEEecc-
Confidence 777677777778889999999999533221110002222 2 1347899999776566655432
Q ss_pred CCCCchhhhhhhh--cCCCCCCcccCchhhhh
Q psy12972 1059 NSIPVPTLQDITD--NNPYLTLPRISSQSMLD 1088 (1578)
Q Consensus 1059 ~~l~~~~L~~fI~--~nk~p~vpeLts~~~~~ 1088 (1578)
+.++...|.+||. .++.|.+++||.++.+.
T Consensus 251 ~~~~~~~i~~fi~~~~~~~p~~~~ls~~~~~~ 282 (298)
T 3ed3_A 251 NSINKNDISKFLRDTFSITPNEGPFSRRSEYI 282 (298)
T ss_dssp SSCCHHHHHHHHHHHHTCCCSSSTTSHHHHHH
T ss_pred ccCCHHHHHHHHHhhcCCCCCcCCCchHHHHH
Confidence 5578889999999 89999999999866443
|
| >3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A | Back alignment and structure |
|---|
Probab=99.88 E-value=5.6e-22 Score=247.74 Aligned_cols=404 Identities=14% Similarity=0.165 Sum_probs=266.8
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeecc-cCccccccCCccccccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYDL-FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~~-~~~~~~i~g~~~~~~~~ 825 (1578)
..++..||++.+...+.+++|+|+||||||+||++++|+|+++|+.+++. .++.++|.... +|+..++.++
T Consensus 4 ~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~------- 76 (481)
T 3f8u_A 4 LELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGY------- 76 (481)
T ss_dssp EEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCEE-------
T ss_pred EEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCCC-------
Confidence 46778899999866556699999999999999999999999999999985 44555553332 5555555554
Q ss_pred cccccCcccccccccc-ccCccC----ccccee-------EEEee-ccccccceecccCCCCcEEEEEEcCCCccccccc
Q psy12972 826 HNHMYNPFDDVFSEGF-NFPFEE----HDISLF-------HKLST-THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVE 892 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~~-~~~~~~----~~i~~~-------~vi~L-t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~ 892 (1578)
||+.+|..|- ...+.+ +.+..+ .+..+ +.+++++.+ +.++.++|.||.++|..| .
T Consensus 77 ------Ptl~~~~~g~~~~~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~vv~~~~~~~~~~---~ 144 (481)
T 3f8u_A 77 ------PTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFI---SDKDASIVGFFDDSFSEA---H 144 (481)
T ss_dssp ------SEEEEEETTEEEEECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHT---TSSSCEEEEEESCTTCHH---H
T ss_pred ------CEEEEEeCCceeeeecCccCHHHHHHHHHhhcccCceecCCHHHHHHHH---hcCCcEEEEEECCCccch---H
Confidence 8988888662 223333 222222 12344 455666655 447889999999987765 5
Q ss_pred HHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEc--------CCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 893 PIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLT--------DGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 893 p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~--------~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+.|.++|..+.+. +.|+.+ .+.+++++++++. .| +++|+ ++....|..|..+.++|.+||....-|
T Consensus 145 ~~f~~~a~~~~~~-~~F~~~---~~~~~~~~~~v~~-~~-i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p 218 (481)
T 3f8u_A 145 SEFLKAASNLRDN-YRFAHT---NVESLVNEYDDNG-EG-IILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFG 218 (481)
T ss_dssp HHHHHHHHHHTTT-SCEEEE---CCHHHHHHHCSSS-EE-EEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhccC-ceEEEE---CCHHHHHHhCCCC-Cc-EEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCC
Confidence 7899999999775 888865 4678999999986 44 88887 334445544889999999999877643
Q ss_pred ccccccccccHHHHhhcccCCCcEEEEEeccC-CchH-----HH-HHHHHhhcCCC---eEEEEEEcccCCChhHHhhcC
Q psy12972 965 KLIVPLSATNVDAFLDNWREDNKVHALLFQRS-LPVR-----LR-YLINAFKHRTT---IVFGVIVYDQEDSSSVFQRFK 1034 (1578)
Q Consensus 965 ~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~-~~~~-----~~-~~~~a~~~~~~---v~Fg~v~~~~~~~~~l~~kf~ 1034 (1578)
++..+|.+++..+.+. ..++++++.+. .... .. ....|..++++ +.|++++ .......++.||
T Consensus 219 -~v~e~t~~n~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D--~~~~~~~l~~~g 291 (481)
T 3f8u_A 219 -ICPHMTEDNKDLIQGK----DLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVAS--RKTFSHELSDFG 291 (481)
T ss_dssp -TSCEECTTTHHHHTTS----SEEEEEECCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEE--TTTTHHHHGGGT
T ss_pred -CccccChhHHHHhcCC----CceEEEEecccccchhhHHHHHHHHHHHHHHhcCCCceEEEEEEc--HHHHHHHHHHcC
Confidence 4777888998888744 33333332221 1221 11 12233355555 9999985 445677888999
Q ss_pred CCC---CCcEEEEeccCCCCCccccccCCCCch--hhhhhhhcC------------CC-----CCCcccCchhhhhhcCC
Q psy12972 1035 VPG---DKDSLLIFKEDKDRPSASITMNSIPVP--TLQDITDNN------------PY-----LTLPRISSQSMLDAVCP 1092 (1578)
Q Consensus 1035 V~~---~~Ptllvfk~~~~~~~~~l~~~~l~~~--~L~~fI~~n------------k~-----p~vpeLts~~~~~~~c~ 1092 (1578)
+.. ..|.++++..+.. .+...+.++.. .|.+|++.- .. ..+..++..++.+.+-.
T Consensus 292 l~~~~~~~P~~~i~~~~~~---ky~~~~~~t~e~~~l~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~ 368 (481)
T 3f8u_A 292 LESTAGEIPVVAIRTAKGE---KFVMQEEFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNN 368 (481)
T ss_dssp CCCCTTCSCEEEEECSSSC---EEECCSCCCTTSHHHHHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTC
T ss_pred CCcccCCCcEEEEEcCCCc---ccCCCcccCccHHHHHHHHHHHhcCCcccccccCCCCCCCCCCeEEecccCHHHHhhc
Confidence 972 4789999853221 12222455556 677776532 11 12334555565555543
Q ss_pred CCceEEEEEe-cCCcchHHHHHHHHHHHhhccCCCC-cEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEEcCCcc
Q psy12972 1093 VKKLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHN-NIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKKI 1170 (1578)
Q Consensus 1093 ~~~lcVll~~-~~~~~~~~~~~~lr~vA~~~~~~~~-~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~n~~~~ 1170 (1578)
.++.++|.|- +-...+......+.+++++ +.++ .+.|+.||.+.. ++...+ +. .++|.++..+..+.
T Consensus 369 ~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~--~~~~~~v~~~~id~~~~-~~~~~~-------~v-~~~Pt~~~~~~~~~ 437 (481)
T 3f8u_A 369 ENKDVLIEFYAPWCGHCKNLEPKYKELGEK--LSKDPNIVIAKMDATAN-DVPSPY-------EV-RGFPTIYFSPANKK 437 (481)
T ss_dssp TTCEEEEEEECTTBHHHHHHHHHHHHHHHH--TTTCSSEEEEEEETTSS-CCCTTC-------CC-CSSSEEEEECTTCT
T ss_pred CCCcEEEEEecCcChhHHHhhHHHHHHHHH--hccCCCEEEEEEECCch-hhHhhC-------CC-cccCEEEEEeCCCe
Confidence 3466666664 4456678888899999999 7664 599999998765 443333 22 57888887775543
Q ss_pred -eEeeccCCcccccccccccHHHHHHHhhhhhcCCcc
Q psy12972 1171 -KYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 1206 (1578)
Q Consensus 1171 -kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~~ 1206 (1578)
.-..+.|. .+.+.+..+|++....+..
T Consensus 438 ~~~~~~~G~---------~~~~~l~~~l~~~~~~~~~ 465 (481)
T 3f8u_A 438 LNPKKYEGG---------RELSDFISYLQREATNPPV 465 (481)
T ss_dssp TSCEECCSC---------CSHHHHHHHHHHHCSSCCC
T ss_pred EeeeEeCCC---------CCHHHHHHHHHHhcCCccc
Confidence 22234443 5778899999988776554
|
| >3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.7e-20 Score=224.56 Aligned_cols=296 Identities=14% Similarity=0.106 Sum_probs=196.5
Q ss_pred ccccccccccccccCCccCccceecccccccccc---ccch---HHHHHHHHHhcCCCcceeeeeecc---cCccccccC
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFAC---LQVE---PIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSG 817 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghC---k~La---P~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g 817 (1578)
.+.++..||++.+ .++++|||+||||||||| ++|+ |+|+++|+.+++.++.++.++++. +|+..++.+
T Consensus 15 v~~lt~~~f~~~i---~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~~ 91 (367)
T 3us3_A 15 VINVNAKNYKNVF---KKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLTE 91 (367)
T ss_dssp CEECCTTTHHHHH---HHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCCS
T ss_pred cEECCHHHHHHHH---hhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCCc
Confidence 4567888999887 457899999999999996 3333 799999999987554443333322 566666655
Q ss_pred CccccccccccccCccccccccccccCccC----ccccee-------EEEeec-cccccceecccCCCCcEEEEEEcCCC
Q psy12972 818 QDSASRNFHNHMYNPFDDVFSEGFNFPFEE----HDISLF-------HKLSTT-HWNFEKNYIPKSYTTPHLILFYSDWC 885 (1578)
Q Consensus 818 ~~~~~~~~~~i~~~Ptiklf~~~~~~~~~~----~~i~~~-------~vi~Lt-~~nF~~~vl~~s~~~~~LV~FyapwC 885 (1578)
+ ||+.+|..|....|.+ ..+..+ .+..++ .+++++.+. ..+++++|.||++||
T Consensus 92 ~-------------PTl~~f~~G~~~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~--~~~~~~vv~ff~~~~ 156 (367)
T 3us3_A 92 E-------------DSIYVFKEDEVIEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFEN--IEDEIKLIGYFKNKD 156 (367)
T ss_dssp T-------------TEEEEEETTEEEECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHH--CCSSCEEEEECSCTT
T ss_pred C-------------ceEEEEECCcEEEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhc--cCCCcEEEEEECCCC
Confidence 5 9999988764333333 233322 223554 467776552 135889999999986
Q ss_pred cccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC--CccccccCC-CCCHHHHHHHHHhhC
Q psy12972 886 FACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD--GRTSFFKEP-SFSVQKMVEFFRLKL 962 (1578)
Q Consensus 886 g~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~--G~~~~y~~G-~~s~~~L~~fi~~~l 962 (1578)
+ ...+.|.++|..+.+. +.|+.++ +.++|++|+|++ |+|++|+. +....| .| .++.++|.+||....
T Consensus 157 ~---~~~~~f~~~A~~~~~~-~~F~~~~---~~~~~~~~~v~~--p~i~lf~~~~~~~~~y-~g~~~~~~~l~~fi~~~~ 226 (367)
T 3us3_A 157 S---EHYKAFKEAAEEFHPY-IPFFATF---DSKVAKKLTLKL--NEIDFYEAFMEEPVTI-PDKPNSEEEIVNFVEEHR 226 (367)
T ss_dssp C---HHHHHHHHHHHHHTTT-SCEEEEC---CHHHHHHHTCCT--TCEEEECTTCSSCEEC-SSSSCCHHHHHHHHHHTC
T ss_pred c---hHHHHHHHHHHhhcCC-cEEEEEC---CHHHHHHcCCCC--CeEEEEcCCCCCCeec-CCCCCCHHHHHHHHHHcC
Confidence 6 4568999999999875 8899874 468999999974 99999987 334455 46 599999999998877
Q ss_pred CCccccccccccHHHHhhcccCCCcEEEEEeccCCchH----HHHHH-HHhhcCC--CeEEEEEEcccCCCh--hHHhhc
Q psy12972 963 PYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVR----LRYLI-NAFKHRT--TIVFGVIVYDQEDSS--SVFQRF 1033 (1578)
Q Consensus 963 p~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~----~~~~~-~a~~~~~--~v~Fg~v~~~~~~~~--~l~~kf 1033 (1578)
.| ++..+|.+++.++..+. ...+.+++|-+...+. ...+. .|.+++. ++.|++++.+..... .+.+.|
T Consensus 227 ~p-~v~elt~~~~~~~~~~~--~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~f 303 (367)
T 3us3_A 227 RS-TLRKLKPESMYETWEDD--MDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTF 303 (367)
T ss_dssp SC-SEEECCGGGHHHHHHSC--BTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHH
T ss_pred cc-ceeecChhhHHHHHhhc--cCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHHhc
Confidence 54 57788888887776542 1334444454333221 22222 3345666 699999966542211 123568
Q ss_pred CCCCCCcEEEEeccCCCCCccc-ccc--CCCCchhhhhhhhcC
Q psy12972 1034 KVPGDKDSLLIFKEDKDRPSAS-ITM--NSIPVPTLQDITDNN 1073 (1578)
Q Consensus 1034 ~V~~~~Ptllvfk~~~~~~~~~-l~~--~~l~~~~L~~fI~~n 1073 (1578)
++....|++++++........+ +.. +.++...|.+|++.-
T Consensus 304 gl~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~ 346 (367)
T 3us3_A 304 DIDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDV 346 (367)
T ss_dssp TCCTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHH
Confidence 9986679999996432211112 111 357778888887654
|
| >1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A | Back alignment and structure |
|---|
Probab=99.83 E-value=8.6e-22 Score=220.72 Aligned_cols=182 Identities=14% Similarity=0.178 Sum_probs=133.7
Q ss_pred cCccceeccccc-cccccccchHHHHHHHHHhcCCCcceeeeee--c-ccCccccccCCccccccccccccCcccccccc
Q psy12972 764 YTTPHLILFYSD-WCFACLQVEPIFKKLMDELSPLGVGFFTVHY--D-LFGTTDGFSGQDSASRNFHNHMYNPFDDVFSE 839 (1578)
Q Consensus 764 ~~~~~lV~FYAp-wCghCk~LaP~weklA~~Lk~~~vg~v~~~~--~-~~~~~~~i~g~~~~~~~~~~i~~~Ptiklf~~ 839 (1578)
.+.+++|.|||| ||+||+++.|.|+++|+......+..++|.. + .+|...++.+. ||+.+|..
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~~~~v~~~~vd~~~~~~~~~~~~~~v~~~-------------Pt~~~~~~ 87 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSELTDKLSYEIVDFDTPEGKELAKRYRIDRA-------------PATTITQD 87 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTTCTTEEEEEEETTSHHHHHHHHHTTCCSS-------------SEEEEEET
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhhCCceEEEEEeCCCcccHHHHHHcCCCcC-------------ceEEEEcC
Confidence 456778999999 9999999999999999753323444444432 1 14444455444 88888754
Q ss_pred ccc--cCccC----ccccee---------EEEeeccccccceecccCCCCcE-EEEEEcCCCcccccccHHHHHHHHHhC
Q psy12972 840 GFN--FPFEE----HDISLF---------HKLSTTHWNFEKNYIPKSYTTPH-LILFYSDWCFACLQVEPIFKKLMDELS 903 (1578)
Q Consensus 840 ~~~--~~~~~----~~i~~~---------~vi~Lt~~nF~~~vl~~s~~~~~-LV~FyapwCg~Ck~l~p~~~~lA~~l~ 903 (1578)
|-. ..+.+ .....+ ....++.++|+... ..++++ +|.||++||++|+.+.|.|++++..+.
T Consensus 88 g~~~~~~~~G~~~~~~l~~~l~~~l~~~~~~~~l~~~~~~~~~---~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~ 164 (226)
T 1a8l_A 88 GKDFGVRYFGLPAGHEFAAFLEDIVDVSREETNLMDETKQAIR---NIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENT 164 (226)
T ss_dssp TBCCSEEEESCCCTTHHHHHHHHHHHHHHTCCCCCHHHHHHHT---TCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHH
T ss_pred CceeeEEEeccCcHHHHHHHHHHHHhhcCCCCCCCHHHHHHHH---hcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcc
Confidence 421 12222 111111 11346666666543 235566 999999999999999999999999986
Q ss_pred C---CceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 904 P---LGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 904 ~---~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+ .++.++.||++.++++|++|+|.+ +||+++|++|+....+.|.++.++|.+|+.+.+
T Consensus 165 ~~~~~~v~~~~vd~~~~~~l~~~~~v~~-~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 165 KAGKGKILGDMVEAIEYPEWADQYNVMA-VPKIVIQVNGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp HTTCCCEEEEEEEGGGCHHHHHHTTCCS-SCEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred cccCCcEEEEEEEcccCHHHHHhCCCcc-cCeEEEEeCCceeEEEcCCCCHHHHHHHHHHhh
Confidence 2 239999999999999999999998 999999999988777779999999999998653
|
| >1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A | Back alignment and structure |
|---|
Probab=99.82 E-value=6.1e-20 Score=220.10 Aligned_cols=294 Identities=14% Similarity=0.116 Sum_probs=194.9
Q ss_pred ccccccccccccccCCccCccceeccccccccccccchHH-------HHHHHHHhcCCCcceeeeeecc---cCcccccc
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPI-------FKKLMDELSPLGVGFFTVHYDL---FGTTDGFS 816 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~-------weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~ 816 (1578)
...++..||++.+. ++++|+|+||||||| |++++|+ |+++|+.+++.++.++.++++. +|+..++.
T Consensus 13 v~~l~~~~f~~~i~---~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~ 88 (350)
T 1sji_A 13 VVSLTEKNFKQVLK---KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFD 88 (350)
T ss_dssp CEEECHHHHHHHHT---TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCC
T ss_pred cEECCHHHHHHHHh---hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCC
Confidence 34577788998773 478999999999999 9999999 9999999987544443333322 55555555
Q ss_pred CCccccccccccccCccccccccccccCccC----ccccee-------EEEeec-cccccceecccCCCCcEEEEEEcCC
Q psy12972 817 GQDSASRNFHNHMYNPFDDVFSEGFNFPFEE----HDISLF-------HKLSTT-HWNFEKNYIPKSYTTPHLILFYSDW 884 (1578)
Q Consensus 817 g~~~~~~~~~~i~~~Ptiklf~~~~~~~~~~----~~i~~~-------~vi~Lt-~~nF~~~vl~~s~~~~~LV~Fyapw 884 (1578)
++ ||+.+|..|....+.+ +.+..+ .+..++ .+++++.+.. .+++++|.||++|
T Consensus 89 ~~-------------Pt~~~~~~g~~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~--~~~~~vv~ff~~~ 153 (350)
T 1sji_A 89 EE-------------GSLYVLKGDRTIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERI--EDQIKLIGFFKSE 153 (350)
T ss_dssp ST-------------TEEEEEETTEEEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHC--CSSCEEEEECSCT
T ss_pred cc-------------ceEEEEECCcEEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhcc--CCCcEEEEEECCC
Confidence 54 8888887654323333 222222 234453 4567665420 3568899999998
Q ss_pred CcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCC-ccccccCCC-CCHHHHHHHHHhhC
Q psy12972 885 CFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDG-RTSFFKEPS-FSVQKMVEFFRLKL 962 (1578)
Q Consensus 885 Cg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G-~~~~y~~G~-~s~~~L~~fi~~~l 962 (1578)
|.. ..+.|.++|..+++. +.|+.++ ++++|++++|+ +|++++|+++ .....|.|. ++.++|.+|+....
T Consensus 154 ~~~---~~~~~~~~A~~~~~~-~~f~~~~---~~~~~~~~~v~--~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~ 224 (350)
T 1sji_A 154 ESE---YYKAFEEAAEHFQPY-IKFFATF---DKGVAKKLSLK--MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQ 224 (350)
T ss_dssp TSH---HHHHHHHHHHHTTTT-SEEEEEC---CHHHHHHHTCC--TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHC
T ss_pred CcH---HHHHHHHHHHhhccC-cEEEEEC---CHHHHHHcCCC--CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcC
Confidence 654 468999999999775 8999874 56799999996 8999999863 333344575 99999999998876
Q ss_pred CCccccccccccHHHHhhcccCCCcEEEEEeccCCchH----HHHHH-HHhhcCC--CeEEEEEEcccCCChhHH----h
Q psy12972 963 PYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVR----LRYLI-NAFKHRT--TIVFGVIVYDQEDSSSVF----Q 1031 (1578)
Q Consensus 963 p~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~----~~~~~-~a~~~~~--~v~Fg~v~~~~~~~~~l~----~ 1031 (1578)
-| .+..+|.+++..+.++. .+..++++ |.....+. ...+. .|.+++. ++.|++++.+ ....++ +
T Consensus 225 ~p-~v~elt~~~~~~~~~~~-~~~~~~l~-f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~--~~~~~~~~~~~ 299 (350)
T 1sji_A 225 RP-TLRRLRPEDMFETWEDD-LNGIHIVA-FAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPD--DFPLLVAYWEK 299 (350)
T ss_dssp CC-SEEECCTTTHHHHHHSC-SSSEEEEE-ECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGG--GCHHHHHHHHH
T ss_pred cc-chhhcChhhHHHHhcCC-CCCcEEEE-EEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECch--hhHHHHHHHHh
Confidence 54 47788999998887652 11234444 54433321 22222 2335554 7889998644 455666 7
Q ss_pred hcCCCCCCcEEEEeccCCCCCccc-cc--cCCCCchhhhhhhhcC
Q psy12972 1032 RFKVPGDKDSLLIFKEDKDRPSAS-IT--MNSIPVPTLQDITDNN 1073 (1578)
Q Consensus 1032 kf~V~~~~Ptllvfk~~~~~~~~~-l~--~~~l~~~~L~~fI~~n 1073 (1578)
.|++....|++++++........+ +. .+.++...|.+|++.-
T Consensus 300 ~~gi~~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~ 344 (350)
T 1sji_A 300 TFKIDLFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDV 344 (350)
T ss_dssp HCCSCTTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHH
T ss_pred hcCCCccCCcEEEEecccccccccCCCcccccCCHHHHHHHHHHH
Confidence 899985468999996522211111 11 2356667888887653
|
| >2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.7e-20 Score=209.27 Aligned_cols=176 Identities=10% Similarity=0.071 Sum_probs=129.2
Q ss_pred Cccceeccc-----cccccccccchHHHHHHHHHhcC--C-Ccceeeeeecc-cCccccccCCccccccccccccCcccc
Q psy12972 765 TTPHLILFY-----SDWCFACLQVEPIFKKLMDELSP--L-GVGFFTVHYDL-FGTTDGFSGQDSASRNFHNHMYNPFDD 835 (1578)
Q Consensus 765 ~~~~lV~FY-----ApwCghCk~LaP~weklA~~Lk~--~-~vg~v~~~~~~-~~~~~~i~g~~~~~~~~~~i~~~Ptik 835 (1578)
.++++|.|| +|||+||+++.|+|+++|+.+.+ . .++.++|..+. +|+..+++++ ||+.
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~-------------Ptl~ 86 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRV-------------PTIV 86 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBS-------------SEEE
T ss_pred cCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcC-------------cEEE
Confidence 456666666 99999999999999999998843 2 33333333222 5555555555 8888
Q ss_pred ccccc-----cccCccCccccee---------EEEeeccccccceecccCCCCcE-EEEEEcCCCcccccccHHHHHHHH
Q psy12972 836 VFSEG-----FNFPFEEHDISLF---------HKLSTTHWNFEKNYIPKSYTTPH-LILFYSDWCFACLQVEPIFKKLMD 900 (1578)
Q Consensus 836 lf~~~-----~~~~~~~~~i~~~---------~vi~Lt~~nF~~~vl~~s~~~~~-LV~FyapwCg~Ck~l~p~~~~lA~ 900 (1578)
+|+.+ |.+......+..+ ....++.++|+..+ +.++++ +|.||++||++|+.+.|.|++++.
T Consensus 87 ~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~ 163 (229)
T 2ywm_A 87 IEGDKDYGIRYIGLPAGLEFTTLINGIFHVSQRKPQLSEKTLELLQ---VVDIPIEIWVFVTTSCGYCPSAAVMAWDFAL 163 (229)
T ss_dssp EESSSCCCEEEESCCCTTHHHHHHHHHHHHHTTCCSCCHHHHHHHT---TCCSCEEEEEEECTTCTTHHHHHHHHHHHHH
T ss_pred EECCCcccceecCCccHHHHHHHHHHHHhccCCccCCCHHHHHHHH---hcCCCeEEEEEECCCCcchHHHHHHHHHHHH
Confidence 88643 1122222222111 12467778887754 234555 889999999999999999999999
Q ss_pred HhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 901 ELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 901 ~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
.+. ++.++.||++.++++|++|+|.+ +||+++ +|+ +..+.|.++.++|.+|+.+.+
T Consensus 164 ~~~--~v~~~~vd~~~~~~l~~~~~v~~-~Pt~~~--~G~-~~~~~G~~~~~~l~~~l~~~~ 219 (229)
T 2ywm_A 164 AND--YITSKVIDASENQDLAEQFQVVG-VPKIVI--NKG-VAEFVGAQPENAFLGYIMAVY 219 (229)
T ss_dssp HCT--TEEEEEEEGGGCHHHHHHTTCCS-SSEEEE--GGG-TEEEESCCCHHHHHHHHHHHH
T ss_pred HCC--CeEEEEEECCCCHHHHHHcCCcc-cCEEEE--CCE-EEEeeCCCCHHHHHHHHHHHh
Confidence 983 49999999999999999999998 999998 787 443569999999999998765
|
| >3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A | Back alignment and structure |
|---|
Probab=99.79 E-value=3.6e-20 Score=222.75 Aligned_cols=195 Identities=15% Similarity=0.185 Sum_probs=139.7
Q ss_pred ccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeee---ecccCccccccCCcccccccc
Q psy12972 751 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVH---YDLFGTTDGFSGQDSASRNFH 826 (1578)
Q Consensus 751 ~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~---~~~~~~~~~i~g~~~~~~~~~ 826 (1578)
+..||...+. +..++|+|.||++||++|+++.|.|+++|+.+++. .++.++|. ...+|...++.+.+
T Consensus 123 ~~~~~~~~~~--~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~------- 193 (361)
T 3uem_A 123 TEQTAPKIFG--GEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEE------- 193 (361)
T ss_dssp STTTHHHHHS--CSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTT-------
T ss_pred CcccHHHHhc--CCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccC-------
Confidence 3345554431 23457899999999999999999999999999875 44555554 11256666665511
Q ss_pred ccccCccccccccc-----cc---cCc---------------------cCccc----ceeEEEeeccccccceecccCCC
Q psy12972 827 NHMYNPFDDVFSEG-----FN---FPF---------------------EEHDI----SLFHKLSTTHWNFEKNYIPKSYT 873 (1578)
Q Consensus 827 ~i~~~Ptiklf~~~-----~~---~~~---------------------~~~~i----~~~~vi~Lt~~nF~~~vl~~s~~ 873 (1578)
.|++.++..+ |. +.+ ....+ ....+..++.++|++.+... +
T Consensus 194 ----~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~--~ 267 (361)
T 3uem_A 194 ----CPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDE--K 267 (361)
T ss_dssp ----CSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHTCT--T
T ss_pred ----CccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhhhcccC--C
Confidence 1333332210 00 000 00000 11124568899999887543 7
Q ss_pred CcEEEEEEcCCCcccccccHHHHHHHHHhCCC-ceEEEEEECccchhhHhHcCccccCCcEEEEcCC--ccccccCCCCC
Q psy12972 874 TPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDG--RTSFFKEPSFS 950 (1578)
Q Consensus 874 ~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~-~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G--~~~~y~~G~~s 950 (1578)
++++|.||||||++|+++.|.|+++|+.+++. ++.+++|||+.+. |++|+|.+ +||+++|.+| +....+.|.++
T Consensus 268 k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~--~~~~~v~~-~Pt~~~~~~~~~~~~~~~~G~~~ 344 (361)
T 3uem_A 268 KNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE--VEAVKVHS-FPTLKFFPASADRTVIDYNGERT 344 (361)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB--CSSCCCCS-SSEEEEECSSSSCCCEECCSCSS
T ss_pred CcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc--hhhcCCcc-cCeEEEEECCCCcceeEecCCCC
Confidence 89999999999999999999999999999875 4999999999886 89999998 9999999655 44556679999
Q ss_pred HHHHHHHHHhhCC
Q psy12972 951 VQKMVEFFRLKLP 963 (1578)
Q Consensus 951 ~~~L~~fi~~~lp 963 (1578)
.++|.+|+.++..
T Consensus 345 ~~~l~~~l~~~~~ 357 (361)
T 3uem_A 345 LDGFKKFLESGGQ 357 (361)
T ss_dssp HHHHHHHHTTTSC
T ss_pred HHHHHHHHHhcCC
Confidence 9999999987653
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.77 E-value=3.2e-19 Score=214.90 Aligned_cols=225 Identities=14% Similarity=0.050 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCcchh-hHHHHHhcCCCCCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhcCccccccccc
Q psy12972 283 LASVHQRSANRILSMCLTNGGLYI-KLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSF 361 (1578)
Q Consensus 283 ~~~~h~r~a~~l~~~~~~~Gg~yi-KlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~~~~~~~~~~g~~~~~~~~~f 361 (1578)
.++.|.+.|++..+.+..+|+..+ +++|.+...++.. ++++.++++|||.+||.++.++.+.
T Consensus 14 ~~~~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~---------------- 76 (365)
T 2y7j_A 14 KFNKERRRARREIRHLPNLNREQRRAFIRSLRDDPSQS-ANLLAEAKKLNDAQPKGTENLYFQS---------------- 76 (365)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cchHHHHHHHHHHhcCccchhcccccccccccCCCchh-HHHHHHHHhhhhcCCCCcccccccc----------------
Confidence 356677889999999999999998 8899888877755 4566789999999998665543322
Q ss_pred CCCchhHHHHHHHHHhhhhhhhhhhHHHHHHHHhCCChhhhccccCC-----cccccccceEEEEEEec-CCCEEEEEEe
Q psy12972 362 DENPIAAASLAQALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDE-----NPIAAASLAQVFRAVTK-EGVEVAVKVQ 435 (1578)
Q Consensus 362 ~~~p~~~~~~~~~l~~~~~~~~~~~v~~~~~~~lG~~~~~iF~~fd~-----~PlasaSiaQVhrA~l~-~G~~VAVKVq 435 (1578)
++.++|.+..+.|..|+. ++||+|++|+||+|+.+ +|+.||||++
T Consensus 77 -----------------------------~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~ 127 (365)
T 2y7j_A 77 -----------------------------MGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIM 127 (365)
T ss_dssp ----------------------------------CBCHHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEE
T ss_pred -----------------------------CCchhhcccchhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEE
Confidence 234455555555555555 89999999999999986 7999999999
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCc
Q psy12972 436 YIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSST 515 (1578)
Q Consensus 436 ~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~ 515 (1578)
+++.......|+ +++.+.+ .+|...+.++. +++.|..+..+++.++.
T Consensus 128 ~~~~~~~~~~~~-----------------------~~~~~~~------~~E~~~l~~l~----~hp~iv~~~~~~~~~~~ 174 (365)
T 2y7j_A 128 EVTAERLSPEQL-----------------------EEVREAT------RRETHILRQVA----GHPHIITLIDSYESSSF 174 (365)
T ss_dssp ETTSSCCCHHHH-----------------------HHHHHHH------HHHHHHHHHHT----TCTTBCCEEEEEEBSSE
T ss_pred EccccccCHHHH-----------------------HHHHHHH------HHHHHHHHHhc----CCCCEeEEEEEEeeCCE
Confidence 987643322221 2223333 34444454442 45667667777777888
Q ss_pred eEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 516 RVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 516 ~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
.+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+||||+|||+. .++++|||....+
T Consensus 175 ~~lv~e~~~g~~L~~~l~-~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 175 MFLVFDLMRKGELFDYLT-EKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp EEEEECCCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEEeCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 899999999999988754 334677776666666655 7889999999999999999964 5899999976543
|
| >2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-18 Score=219.24 Aligned_cols=397 Identities=10% Similarity=0.084 Sum_probs=245.2
Q ss_pred ccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccc
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASR 823 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~ 823 (1578)
...++..||++.+ .++++|+|+||||||+||++++|+|+++|+.+++.++.++.++++. +|+..++.++
T Consensus 16 v~~l~~~~f~~~~---~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~----- 87 (504)
T 2b5e_A 16 VVKLATDSFNEYI---QSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGF----- 87 (504)
T ss_dssp CEECCTTTHHHHH---TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCSS-----
T ss_pred cEECCHHHHHHHH---hcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCcC-----
Confidence 3456778899876 3578999999999999999999999999999987544343333222 5666666555
Q ss_pred cccccccCcccccccccc---ccCccC----ccccee-------EEEeeccccccceecccCCCCcEEEEEEcCCCcccc
Q psy12972 824 NFHNHMYNPFDDVFSEGF---NFPFEE----HDISLF-------HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACL 889 (1578)
Q Consensus 824 ~~~~i~~~Ptiklf~~~~---~~~~~~----~~i~~~-------~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck 889 (1578)
||+.+|..|. ...+.+ +.+..+ .+..++. +++.+ ..+.....+|.|+.+.++
T Consensus 88 --------Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~~~~v~~i~~--~~~~~-~~~~~~~~~v~~f~~~~~--- 153 (504)
T 2b5e_A 88 --------PSLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQPAVAVVAD--LPAYL-ANETFVTPVIVQSGKIDA--- 153 (504)
T ss_dssp --------SEEEEEETTCTTCEEECCSCCSHHHHHHHHHHHTSCSEEECSC--HHHHH-HHSCCSSCEEEEEESCCH---
T ss_pred --------CEEEEEeCCccccceeecCCCCHHHHHHHHHHhcCCcceeHHH--HHHHH-hcCCCceEEEEEeCCCCc---
Confidence 8888887654 223333 222221 1234444 44433 221112566667776544
Q ss_pred cccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCC-C---CHHHHHHHHHhhCCCc
Q psy12972 890 QVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPS-F---SVQKMVEFFRLKLPYK 965 (1578)
Q Consensus 890 ~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~-~---s~~~L~~fi~~~lp~~ 965 (1578)
...+.|.++|..+.+. +.|+.++ +++++++++ +++|+.......+.|. . +.+.|.+||....-|
T Consensus 154 ~~~~~f~~~A~~~~~~-~~F~~~~-----~~~~~~~~~-----i~l~~~~~~~~~~~g~~~~~~~~~~l~~fi~~~~~p- 221 (504)
T 2b5e_A 154 DFNATFYSMANKHFND-YDFVSAE-----NADDDFKLS-----IYLPSAMDEPVVYNGKKADIADADVFEKWLQVEALP- 221 (504)
T ss_dssp HHHHHHHHHHHHTTTT-CEEEEEE-----CTTSCCEEE-----EEETTEEEEEEECCSCHHHHTSHHHHHHHHHHHSSC-
T ss_pred hHHHHHHHHHHHhhcC-cEEEEEH-----HHHHhcCCe-----EEecCCCCcccccCCcccccCCHHHHHHHHHhcccC-
Confidence 3467999999999765 8999887 577777663 6777652233334576 5 889999999776543
Q ss_pred cccccccccHHHHhhcccCCCcEEEEEeccCCch----HHHHHHHHhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcE
Q psy12972 966 LIVPLSATNVDAFLDNWREDNKVHALLFQRSLPV----RLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 1041 (1578)
Q Consensus 966 vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~----~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Pt 1041 (1578)
++..+|.+++..+.+. ..+++++|...... .......+.+++.++.|++++.. ....+++.|++....|+
T Consensus 222 ~v~~~t~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~l~~~a~~~~~~i~F~~id~~--~~~~~~~~~gl~~~~P~ 295 (504)
T 2b5e_A 222 YFGEIDGSVFAQYVES----GLPLGYLFYNDEEELEEYKPLFTELAKKNRGLMNFVSIDAR--KFGRHAGNLNMKEQFPL 295 (504)
T ss_dssp SSCBCCHHHHHHHHHT----TSCEEEEEESSHHHHHHHHHHHHHHHHHTTTTCEEEEEEHH--HHTTHHHHTTCCSCSSE
T ss_pred CcccCCHhHHHHHhcC----CCcEEEEEecCcccHHHHHHHHHHHHHhcCCeeEEEEEehh--hhHHHHHHcCCcccCCE
Confidence 4778888999888866 34555544322211 11222334467888999999755 34468899999545789
Q ss_pred EEEeccCCCCCcccccc--CC-----------CCchhhhhhhhcC----CC-------------CCCcccCchhhhhhcC
Q psy12972 1042 LLIFKEDKDRPSASITM--NS-----------IPVPTLQDITDNN----PY-------------LTLPRISSQSMLDAVC 1091 (1578)
Q Consensus 1042 llvfk~~~~~~~~~l~~--~~-----------l~~~~L~~fI~~n----k~-------------p~vpeLts~~~~~~~c 1091 (1578)
+++++.... ..+... ++ ++...+..|+..- .. ..+..++..++.+.+-
T Consensus 296 v~i~~~~~~--~ky~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~p~~~s~~~p~~~~~~v~~l~~~~f~~~v~ 373 (504)
T 2b5e_A 296 FAIHDMTED--LKYGLPQLSEEAFDELSDKIVLESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVN 373 (504)
T ss_dssp EEEEETTTT--EEEECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHHHTCCCCCCCCCCCCCCCSCSEEEECTTTHHHHHH
T ss_pred EEEEeCCcC--cccCCCCCccchhhccccccccCHHHHHHHHHHHHcCCCChhhhcCCCCccccccceecccccHHHhhc
Confidence 999965221 111111 22 4555666665432 11 1233455666555443
Q ss_pred CCCceEEEEE-ecCCcchHHHHHHHHHHHhhccCC--CCcEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEEcCC
Q psy12972 1092 PVKKLCVVLF-SEDSPEHDASRHTLRRFAQESRFV--HNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYK 1168 (1578)
Q Consensus 1092 ~~~~lcVll~-~~~~~~~~~~~~~lr~vA~~~~~~--~~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~n~~ 1168 (1578)
..++.++|.| .+-...+......+.++|++ +. ...+.|+.+|.+..... . + +. .++|.++.....
T Consensus 374 ~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~--~~~~~~~v~~~~vd~~~~~~~-~-~-------~v-~~~Pt~~~~~~G 441 (504)
T 2b5e_A 374 DPKKDVLVLYYAPWCGHCKRLAPTYQELADT--YANATSDVLIAKLDHTENDVR-G-V-------VI-EGYPTIVLYPGG 441 (504)
T ss_dssp CTTCCEEEEEECTTCHHHHHHHHHHHHHHHH--HHHHCSSCEEEEEEGGGCCCS-S-C-------CC-SSSSEEEEECCT
T ss_pred cCCCCEEEEEECCCChhHHHHhHHHHHHHHH--hhccCCcEEEEEecCCccccc-c-C-------Cc-eecCeEEEEeCC
Confidence 2344555555 45556777888899999988 65 23588999998654321 2 3 22 467877766433
Q ss_pred cc-eEeeccCCcccccccccccHHHHHHHhhhhhcCCcc
Q psy12972 1169 KI-KYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 1206 (1578)
Q Consensus 1169 ~~-kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~~ 1206 (1578)
+. .-..+.|. .+.+.|..+|++.+.....
T Consensus 442 ~~~~~~~~~G~---------~~~~~l~~~i~~~~~~~~~ 471 (504)
T 2b5e_A 442 KKSESVVYQGS---------RSLDSLFDFIKENGHFDVD 471 (504)
T ss_dssp TSCCCCBCCSC---------CCHHHHHHHHHHHCTTCCC
T ss_pred ceecceEecCC---------CCHHHHHHHHHhcCCCCCC
Confidence 22 11113332 4678899999987654443
|
| >3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A | Back alignment and structure |
|---|
Probab=99.77 E-value=2.5e-18 Score=194.09 Aligned_cols=205 Identities=20% Similarity=0.289 Sum_probs=158.0
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCc--eEEEEEECccchhhHhHcCccccCCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG--VGFFTVHVHNEQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~--v~~a~VDc~~~~~L~~k~gV~~~~PT 932 (1578)
++.++.++|++.+ ..+++++|.|||+||++|+.+.|.|+++++.+++.+ +.++.|||+.++++|++|+|++ +||
T Consensus 17 v~~l~~~~~~~~~---~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~-~Pt 92 (241)
T 3idv_A 17 VLVLNDANFDNFV---ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSG-YPT 92 (241)
T ss_dssp EEEECTTTHHHHH---TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCS-SSE
T ss_pred cEEecccCHHHHH---hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCc-CCE
Confidence 5679999999877 457899999999999999999999999999997654 9999999999999999999998 999
Q ss_pred EEEEcCCccccccCCCCCHHHHHHHHHhhCCC------ccccccccccHHHHhhcccCCCcEEEEEec-------cCCch
Q psy12972 933 IALLTDGRTSFFKEPSFSVQKMVEFFRLKLPY------KLIVPLSATNVDAFLDNWREDNKVHALLFQ-------RSLPV 999 (1578)
Q Consensus 933 l~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~------~vv~~it~~~~~~fl~~~~~~~~~~VlfF~-------~~~~~ 999 (1578)
+++|++|+.+. +.|.++.++|.+|+.+.+.+ ..+..++.+++++++... .++++.|. ....+
T Consensus 93 ~~~~~~g~~~~-~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~f~a~wC~~C~~~~p 167 (241)
T 3idv_A 93 IKILKKGQAVD-YEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDA----DIILVEFYAPWCGHCKKLAP 167 (241)
T ss_dssp EEEEETTEEEE-CCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHC----SEEEEEEECTTCTGGGGTHH
T ss_pred EEEEcCCCccc-ccCcccHHHHHHHHhhccCcccccccccceeccHHHHHHhhccC----CeEEEEEECCCCHHHHHhHH
Confidence 99999998775 55999999999999877533 245667889999998763 45555552 23334
Q ss_pred HHHHHHHHhhc-CCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhhcCCC
Q psy12972 1000 RLRYLINAFKH-RTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNNPY 1075 (1578)
Q Consensus 1000 ~~~~~~~a~~~-~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~nk~ 1075 (1578)
.+......... ...+.|+.++++ .+.+++++|+|.+ .||+++|+++. +.. ..+..+...|.+|+....-
T Consensus 168 ~~~~~a~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~-~Pt~~~~~~g~--~~~--~~g~~~~~~l~~~l~~~~~ 237 (241)
T 3idv_A 168 EYEKAAKELSKRSPPIPLAKVDAT--AETDLAKRFDVSG-YPTLKIFRKGR--PYD--YNGPREKYGIVDYMIEQSG 237 (241)
T ss_dssp HHHHHHHHHHTSSSCCCEEEEETT--TCHHHHHHTTCCS-SSEEEEEETTE--EEE--CCSCCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccCCcEEEEEEECC--CCHHHHHHcCCcc-cCEEEEEECCe--EEE--ecCCCCHHHHHHHHHhhhC
Confidence 44433333322 234788887544 6789999999987 57999997542 222 2456677788888877643
|
| >2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-18 Score=211.24 Aligned_cols=289 Identities=13% Similarity=0.127 Sum_probs=172.5
Q ss_pred ccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-----Ccceeeeeecc---cCccccccCC
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-----GVGFFTVHYDL---FGTTDGFSGQ 818 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-----~vg~v~~~~~~---~~~~~~i~g~ 818 (1578)
...++..||+..+ .++++|||+||||||+||++++|+|+++|+.+++. .+.++.++++. +|+..++.+
T Consensus 7 v~~l~~~~f~~~~---~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~- 82 (382)
T 2r2j_A 7 ITSLDTENIDEIL---NNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISK- 82 (382)
T ss_dssp -CBCCTTTHHHHH---HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCE-
T ss_pred eEECCHHHHHHHH---hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCc-
Confidence 3456777888865 35689999999999999999999999999999642 23333332221 444444444
Q ss_pred ccccccccccccCcccccccccccc--CccC----ccccee-------EEEeec-cccccceecccCCCCcEEEEEEcCC
Q psy12972 819 DSASRNFHNHMYNPFDDVFSEGFNF--PFEE----HDISLF-------HKLSTT-HWNFEKNYIPKSYTTPHLILFYSDW 884 (1578)
Q Consensus 819 ~~~~~~~~~i~~~Ptiklf~~~~~~--~~~~----~~i~~~-------~vi~Lt-~~nF~~~vl~~s~~~~~LV~Fyapw 884 (1578)
+||+.+|..|... .+.+ +.+..+ .+..++ .++++. + ..+++++|.||+++
T Consensus 83 ------------~Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l---~~~~~~~v~ff~~~ 146 (382)
T 2r2j_A 83 ------------YPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-L---DRSKRNIIGYFEQK 146 (382)
T ss_dssp ------------ESEEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC----------------CCEEEEEESCS
T ss_pred ------------CCEEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-h---cCCCCEEEEEECCC
Confidence 4888888765432 2333 222221 113443 345665 4 34678999999998
Q ss_pred CcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCc--cccccCCCC-CHHHHHHHHHhh
Q psy12972 885 CFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGR--TSFFKEPSF-SVQKMVEFFRLK 961 (1578)
Q Consensus 885 Cg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~--~~~y~~G~~-s~~~L~~fi~~~ 961 (1578)
|..+ .+.|.++|..+++. +.|+.+.+ +++++++|++ +| +++++.+. ....|.|.+ +.++|.+||...
T Consensus 147 ~~~~---~~~f~~~A~~~~~~-~~F~~~~~----~~~~~~~v~~-~p-i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~ 216 (382)
T 2r2j_A 147 DSDN---YRVFERVANILHDD-CAFLSAFG----DVSKPERYSG-DN-IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDK 216 (382)
T ss_dssp SSHH---HHHHHHHHHHHTTT-CEEEEEES----CC---------CE-EEEECSSSSSCCEECCSCTTCHHHHHHHHHHH
T ss_pred CChh---HHHHHHHHHHhhcc-ceEEEEeh----hhHHhhCCCC-Cc-eEECCCCCCCcCcccCCCCCCHHHHHHHHHhc
Confidence 7654 56899999999876 88888776 4688899997 99 66665422 223345777 899999999876
Q ss_pred CCCccccccccccHHHHhhcccCCCcEEEEEeccCCchHHHHH----HH-HhhcCCCeEEEEEEcccCCChhHHhhcCCC
Q psy12972 962 LPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYL----IN-AFKHRTTIVFGVIVYDQEDSSSVFQRFKVP 1036 (1578)
Q Consensus 962 lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~----~~-a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~ 1036 (1578)
..| .+..+|.+++..++.+. ...+++|+..........+ .. +..++.++.|++++.+ ....+++.+++.
T Consensus 217 ~~p-~v~elt~~~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~id~~--~~~~~~~~~gl~ 290 (382)
T 2r2j_A 217 CVP-LVREITFENGEELTEEG---LPFLILFHMKEDTESLEIFQNEVARQLISEKGTINFLHADCD--KFRHPLLHIQKT 290 (382)
T ss_dssp HSC-SSEECCHHHHHHHHTTC---CCEEEEEECTTCCHHHHHHHHHHHHHTGGGTTTSEEEEEETT--TTHHHHHHTTCC
T ss_pred ccC-ceEecChhhHHHHhcCC---CcEEEEEecCCchHHHHHHHHHHHHHHHHhCCeeEEEEEchH--HhHHHHHHcCCC
Confidence 543 47788888888887652 3344444443332222222 22 2356778999999644 567788999997
Q ss_pred C-CCcEEEEeccCCCCCccccc-cCCCCchhhhhhhhcC
Q psy12972 1037 G-DKDSLLIFKEDKDRPSASIT-MNSIPVPTLQDITDNN 1073 (1578)
Q Consensus 1037 ~-~~Ptllvfk~~~~~~~~~l~-~~~l~~~~L~~fI~~n 1073 (1578)
. ..|++++++.... ..+.. .+.++...|.+|++.-
T Consensus 291 ~~~~P~i~i~~~~~~--y~~~~~~~~~~~~~i~~F~~d~ 327 (382)
T 2r2j_A 291 PADCPVIAIDSFRHM--YVFGDFKDVLIPGKLKQFVFDL 327 (382)
T ss_dssp GGGCSEEEEECSSCE--EECCCSGGGGSTTHHHHHHHHH
T ss_pred ccCCCEEEEEcchhc--CCCCccccccCHHHHHHHHHHH
Confidence 3 4689888743211 11111 1222335677776644
|
| >3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.3e-17 Score=187.55 Aligned_cols=184 Identities=13% Similarity=0.242 Sum_probs=146.8
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCC--CceEEEEEEC--ccchhhHhHcCccccC
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP--LGVGFFTVHV--HNEQGLARRLGVGSQL 930 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~--~~v~~a~VDc--~~~~~L~~k~gV~~~~ 930 (1578)
+..++.++|++.+... +++++|.|||+||++|+++.|.|+++++.+++ .++.++.||| +.+.++|++|+|.+ +
T Consensus 14 v~~l~~~~f~~~i~~~--~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~-~ 90 (244)
T 3q6o_A 14 LTLLQADTVRGAVLGS--RSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPG-F 90 (244)
T ss_dssp SEEECTTTHHHHHSSC--SSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCS-S
T ss_pred ceeCChhhHHHHHhhC--CCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCc-c
Confidence 4578999999988544 68999999999999999999999999999986 2499999999 66899999999998 9
Q ss_pred CcEEEEcCCccc-----cccCCCCCHHHHHHHHHhhCCCcc---------ccccccccHHHHhhcccCCCcEEEEEeccC
Q psy12972 931 PQIALLTDGRTS-----FFKEPSFSVQKMVEFFRLKLPYKL---------IVPLSATNVDAFLDNWREDNKVHALLFQRS 996 (1578)
Q Consensus 931 PTl~lf~~G~~~-----~y~~G~~s~~~L~~fi~~~lp~~v---------v~~it~~~~~~fl~~~~~~~~~~VlfF~~~ 996 (1578)
||+++|.+|+.. .++.| ++.+.|.+++.+.++... ...++.++++.|+... +..+++++|.+.
T Consensus 91 Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~--~~~~~al~f~~~ 167 (244)
T 3q6o_A 91 PTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARN--NEEYLALIFEXG 167 (244)
T ss_dssp SEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHC--CCSEEEEEEECT
T ss_pred CEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcC--CCceEEEEEEEC
Confidence 999999875432 24545 799999999987764322 2445667888888763 467888888887
Q ss_pred CchHHHHHHHHhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccC
Q psy12972 997 LPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKED 1048 (1578)
Q Consensus 997 ~~~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~ 1048 (1578)
.................+.++.+. ..+..++++|+|++ .|++++|+.+
T Consensus 168 ~~~~~~~~~~d~~~~~~i~v~~~~---~~~~~l~~~f~v~~-~Pslvl~~~~ 215 (244)
T 3q6o_A 168 GSYLAREVALDLSQHKGVAVRRVL---NTEANVVRKFGVTD-FPSCYLLFRN 215 (244)
T ss_dssp TCCHHHHHHHHTTTCTTEEEEEEE---TTCHHHHHHHTCCC-SSEEEEEETT
T ss_pred CcchHHHHHHHhccCCceEEEEEe---CchHHHHHHcCCCC-CCeEEEEeCC
Confidence 777777777776666778888773 23589999999997 5799988654
|
| >2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.69 E-value=9.6e-18 Score=190.78 Aligned_cols=179 Identities=12% Similarity=0.072 Sum_probs=125.4
Q ss_pred cCccceecccccc--ccccccchHHHHHHHHHhc---CCC-cceeeeeecc---cCccccccCCccccccccccccCccc
Q psy12972 764 YTTPHLILFYSDW--CFACLQVEPIFKKLMDELS---PLG-VGFFTVHYDL---FGTTDGFSGQDSASRNFHNHMYNPFD 834 (1578)
Q Consensus 764 ~~~~~lV~FYApw--CghCk~LaP~weklA~~Lk---~~~-vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i~~~Pti 834 (1578)
-+++++|.||++| |++|+.+.|.++++|+... +.. +.++.++.+. .|...++.+. ||+
T Consensus 24 ~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~-------------Pt~ 90 (243)
T 2hls_A 24 MVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERV-------------PTV 90 (243)
T ss_dssp CCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSS-------------SEE
T ss_pred CCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcC-------------CEE
Confidence 4578999999999 9999999999999998842 211 4343333222 4445555444 887
Q ss_pred cccccccccCccC----cccceeE---------EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHH
Q psy12972 835 DVFSEGFNFPFEE----HDISLFH---------KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDE 901 (1578)
Q Consensus 835 klf~~~~~~~~~~----~~i~~~~---------vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~ 901 (1578)
.+|+ + ...|.+ .....+. ...+++++++. +. .-.++++++.||||||++|+.+.|.|++++..
T Consensus 91 ~i~~-g-~~~~~G~~~~~~l~~fv~~~l~~~~~~~~l~~~~~~~-~~-~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~ 166 (243)
T 2hls_A 91 AFLG-G-EVRWTGIPAGEEIRALVEVIMRLSEDESGLEDATKEA-LK-SLKGRVHIETIITPSCPYCPYAVLLAHMFAYE 166 (243)
T ss_dssp EETT-T-TEEEESCCCTTHHHHHHHHHHHHHTTCCCCCHHHHHH-HH-HCCSCEEEEEEECSSCSSHHHHHHHHHHHHHH
T ss_pred EEEC-C-ceeEcCCCcHHHHHHHHHHHHhccCCCCCCCHHHHHH-HH-HcCCCcEEEEEECCCCCCcHHHHHHHHHHHHH
Confidence 7773 2 222222 1111110 01233333322 11 11245778999999999999999999999999
Q ss_pred hC--C-CceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 902 LS--P-LGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 902 l~--~-~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+. + .+|.++.||++.+++++++|+|.+ +||+++ +|+.. +.|.++.++|.+|+.+.++.
T Consensus 167 ~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~-vPt~~i--~G~~~--~~G~~~~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 167 AWKQGNPVILSEAVEAYENPDIADKYGVMS-VPSIAI--NGYLV--FVGVPYEEDFLDYVKSAAEG 227 (243)
T ss_dssp HHHTTCCCEEEEEEETTTCHHHHHHTTCCS-SSEEEE--TTEEE--EESCCCHHHHHHHHHHHHTT
T ss_pred cccccCCcEEEEEEECccCHHHHHHcCCee-eCeEEE--CCEEE--EeCCCCHHHHHHHHHHHhhc
Confidence 82 1 349999999999999999999998 999988 78754 45999999999999988754
|
| >3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.3e-16 Score=197.54 Aligned_cols=186 Identities=13% Similarity=0.256 Sum_probs=150.1
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCC--CceEEEEEECc--cchhhHhHcCccccC
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP--LGVGFFTVHVH--NEQGLARRLGVGSQL 930 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~--~~v~~a~VDc~--~~~~L~~k~gV~~~~ 930 (1578)
+.+++.++|++.+... +++++|.|||+||++|+++.|.|+++++.+++ .++.|++|||+ ++.++|++|+|.+ +
T Consensus 14 V~~Lt~~~f~~~v~~~--~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~-~ 90 (519)
T 3t58_A 14 LTLLDADSVRPTVLGS--SSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAG-F 90 (519)
T ss_dssp SEEECTTTHHHHHSSC--SSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCS-B
T ss_pred cEECChHHHHHHHHhC--CCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcc-c
Confidence 4578999999977543 68999999999999999999999999999986 24999999995 4889999999998 9
Q ss_pred CcEEEEcC----CccccccCCCCCHHHHHHHHHhhCCCcc---------ccccccccHHHHhhcccCCCcEEEEEeccCC
Q psy12972 931 PQIALLTD----GRTSFFKEPSFSVQKMVEFFRLKLPYKL---------IVPLSATNVDAFLDNWREDNKVHALLFQRSL 997 (1578)
Q Consensus 931 PTl~lf~~----G~~~~y~~G~~s~~~L~~fi~~~lp~~v---------v~~it~~~~~~fl~~~~~~~~~~VlfF~~~~ 997 (1578)
||+++|.+ |+....+.|.++.+.|.+++.+.++... +..++.+++++++... +..+++++|.+..
T Consensus 91 PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~~--~~~~vallF~~~~ 168 (519)
T 3t58_A 91 PTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRN--KADYLALVFERED 168 (519)
T ss_dssp SEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGSC--CCSEEEEEEECTT
T ss_pred CEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhccC--CCCeEEEEecCCc
Confidence 99999984 4444445577999999999988764322 3445667788888763 4678889998888
Q ss_pred chHHHHHHHHhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCC
Q psy12972 998 PVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDK 1049 (1578)
Q Consensus 998 ~~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~ 1049 (1578)
+...............+.++++. ..+..++++|+|+.. |++++|+.+.
T Consensus 169 s~~~~~~~ldl~~~~~v~v~~v~---~~~~~l~~kfgV~~~-Pslvl~~~nG 216 (519)
T 3t58_A 169 SYLGREVTLDLSQYHAVAVRRVL---NTESDLVNKFGVTDF-PSCYLLLRNG 216 (519)
T ss_dssp CCHHHHHHHHTTTCTTEEEEEEE---TTCHHHHHHHTCCCS-SEEEEEETTS
T ss_pred hHHHHHHHHHhhccCCeeEEEec---CchHHHHHHcCCCCC-CeEEEEeCCC
Confidence 77777777777777778888873 346789999999975 7999996653
|
| >3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A | Back alignment and structure |
|---|
Probab=99.65 E-value=6e-16 Score=185.91 Aligned_cols=279 Identities=14% Similarity=0.137 Sum_probs=185.8
Q ss_pred cCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecccCccccccCCccccccccccccCcccccccc---c
Q psy12972 764 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSE---G 840 (1578)
Q Consensus 764 ~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~~~~~~~i~g~~~~~~~~~~i~~~Ptiklf~~---~ 840 (1578)
.+++++|-||.+-++.+ ...|.++|+.+.+. .+.......+|...++.+ |++.+|+. +
T Consensus 34 ~~~~~vvgff~~~~~~~---~~~f~~~A~~~~~~--~F~~t~~~~v~~~~~v~~--------------~~i~lfk~f~~~ 94 (361)
T 3uem_A 34 SSEVAVIGFFKDVESDS---AKQFLQAAEAIDDI--PFGITSNSDVFSKYQLDK--------------DGVVLFKKFDEG 94 (361)
T ss_dssp TSSEEEEEECSCTTSHH---HHHHHHHHHHCSSS--CEEEECCHHHHHHTTCSS--------------SEEEEEESSTTS
T ss_pred cCCcEEEEEEcCCCchH---HHHHHHHHhcCCCc--eEEEECcHHHHHHhCCCC--------------CeEEEEEecCCC
Confidence 46778999998766654 57999999999543 333232233444444332 34444432 1
Q ss_pred ---cccCccCccccee-------EEEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEE
Q psy12972 841 ---FNFPFEEHDISLF-------HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFF 910 (1578)
Q Consensus 841 ---~~~~~~~~~i~~~-------~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a 910 (1578)
|.+.++.+.+..| .+.++|.++|...+.. ..++++|.||++||++|+++.|.|+++|+.+++. +.|+
T Consensus 95 ~~~~~g~~~~~~i~~fi~~~~~p~v~~~~~~~~~~~~~~--~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~ 171 (361)
T 3uem_A 95 RNNFEGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGG--EIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFI 171 (361)
T ss_dssp EEECCSCCCHHHHHHHHHHHSSCSEEECSTTTHHHHHSC--SCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEE
T ss_pred ccccCCcCCHHHHHHHHHHcCCCcceecCcccHHHHhcC--CCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEE
Confidence 2222222233332 2468899999876632 2567899999999999999999999999999987 9999
Q ss_pred EEECc--cchhhHhHcCccc-cCCcEEEEcCCccc-ccc--CCCCCHHHHHHHHHhhCCC-----------------ccc
Q psy12972 911 TVHVH--NEQGLARRLGVGS-QLPQIALLTDGRTS-FFK--EPSFSVQKMVEFFRLKLPY-----------------KLI 967 (1578)
Q Consensus 911 ~VDc~--~~~~L~~k~gV~~-~~PTl~lf~~G~~~-~y~--~G~~s~~~L~~fi~~~lp~-----------------~vv 967 (1578)
.|||+ .++.+|+.|||++ ++|+++++..|... .|. .|.++.++|.+|+.+.+.. ..+
T Consensus 172 ~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v 251 (361)
T 3uem_A 172 FIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPV 251 (361)
T ss_dssp EECTTSGGGHHHHHHTTCCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSS
T ss_pred EecCChHHHHHHHHHcCCCccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCc
Confidence 99999 6899999999973 39999999875432 232 4789999999999876421 124
Q ss_pred cccccccHHHHhhcccCCCcEEEEEecc-------CCchHHHHHHHHhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCc
Q psy12972 968 VPLSATNVDAFLDNWREDNKVHALLFQR-------SLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKD 1040 (1578)
Q Consensus 968 ~~it~~~~~~fl~~~~~~~~~~VlfF~~-------~~~~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~P 1040 (1578)
..++.+++++++... ++++++.|.. ...+.+..+.........+.|+.++.+... +++|+|.+ .|
T Consensus 252 ~~l~~~~f~~~~~~~---~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~----~~~~~v~~-~P 323 (361)
T 3uem_A 252 KVLVGKNFEDVAFDE---KKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE----VEAVKVHS-FP 323 (361)
T ss_dssp EEECTTTHHHHHTCT---TCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB----CSSCCCCS-SS
T ss_pred EEeecCchhhhcccC---CCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc----hhhcCCcc-cC
Confidence 455778888887543 5556555522 223334443333333345888888654332 67899987 57
Q ss_pred EEEEeccCCC-CCccccccCCCCchhhhhhhhcCC
Q psy12972 1041 SLLIFKEDKD-RPSASITMNSIPVPTLQDITDNNP 1074 (1578)
Q Consensus 1041 tllvfk~~~~-~~~~~l~~~~l~~~~L~~fI~~nk 1074 (1578)
|+++|+.+.. .+..+ .+..+...|.+||+.+.
T Consensus 324 t~~~~~~~~~~~~~~~--~G~~~~~~l~~~l~~~~ 356 (361)
T 3uem_A 324 TLKFFPASADRTVIDY--NGERTLDGFKKFLESGG 356 (361)
T ss_dssp EEEEECSSSSCCCEEC--CSCSSHHHHHHHHTTTS
T ss_pred eEEEEECCCCcceeEe--cCCCCHHHHHHHHHhcC
Confidence 9999965422 33322 45667788999998873
|
| >3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei} | Back alignment and structure |
|---|
Probab=99.59 E-value=8.5e-16 Score=151.74 Aligned_cols=98 Identities=20% Similarity=0.389 Sum_probs=87.0
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
+.++|++.+.+ +.+++++|.|||+||++|+.+.|.|+++++.+.+ +.+++||+++++++|++|+|++ +||+++|++
T Consensus 7 ~~~~f~~~l~~-~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~vd~d~~~~l~~~~~V~~-~PT~~~~~~ 82 (105)
T 3zzx_A 7 DQEDFTKQLNE-AGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD--VVFLKVDVDECEDIAQDNQIAC-MPTFLFMKN 82 (105)
T ss_dssp SHHHHHHHHHH-TTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEETTTCHHHHHHTTCCB-SSEEEEEET
T ss_pred CHHHHHHHHHh-cCCCEEEEEEECCCCCCccCCCcchhhhhhccCC--eEEEEEecccCHHHHHHcCCCe-ecEEEEEEC
Confidence 45688887643 3478999999999999999999999999998864 8999999999999999999998 999999999
Q ss_pred CccccccCCCCCHHHHHHHHHhh
Q psy12972 939 GRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 939 G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
|+.+....| .+.++|.+||.++
T Consensus 83 G~~v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 83 GQKLDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp TEEEEEEES-CCHHHHHHHHHHH
T ss_pred CEEEEEEeC-cCHHHHHHHHHhc
Confidence 998888878 6889999999764
|
| >1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A | Back alignment and structure |
|---|
Probab=99.59 E-value=6e-16 Score=152.17 Aligned_cols=71 Identities=46% Similarity=0.821 Sum_probs=66.4
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDG 706 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~ 706 (1578)
..|+|+||||++++|.++||+|||+++++||||+++ .+.++++|++|++||++|+||.+|+.||.++....
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 73 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF 73 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhh
Confidence 369999999999999999999999999999999997 47889999999999999999999999999998753
|
| >3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0 | Back alignment and structure |
|---|
Probab=99.58 E-value=2.3e-15 Score=153.13 Aligned_cols=104 Identities=13% Similarity=0.155 Sum_probs=90.7
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhC----CCceEEEEEECccchhhHhHcCccccC
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELS----PLGVGFFTVHVHNEQGLARRLGVGSQL 930 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~----~~~v~~a~VDc~~~~~L~~k~gV~~~~ 930 (1578)
++.++.++|++.+.+ .+++++|.|||+||++|+.+.|.|+++|+.+. ..++.+++|||++++++|++|+|.+ +
T Consensus 17 v~~l~~~~f~~~~~~--~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~-~ 93 (127)
T 3h79_A 17 VVELTDETFDSIVMD--PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSG-F 93 (127)
T ss_dssp CEECCTTTHHHHHTC--TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCS-S
T ss_pred eEECChhhHHHHHhC--CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCcc-C
Confidence 457899999998753 37899999999999999999999999998763 1239999999999999999999998 9
Q ss_pred CcEEEEcCCccc--cccCCCCCHHHHHHHHHhh
Q psy12972 931 PQIALLTDGRTS--FFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 931 PTl~lf~~G~~~--~y~~G~~s~~~L~~fi~~~ 961 (1578)
||+++|++|... ..+.|.++.++|.+|+.+.
T Consensus 94 Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 94 PTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp SEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred CEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 999999988653 3566999999999999764
|
| >2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.8e-15 Score=141.06 Aligned_cols=73 Identities=48% Similarity=0.797 Sum_probs=68.6
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.....|+|++|||+++++.++||+|||++++++|||+++.+.+.++|++|++||++|+||.+|+.||.+|..+
T Consensus 3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 3 SGSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 3456799999999999999999999999999999999998899999999999999999999999999988764
|
| >1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 | Back alignment and structure |
|---|
Probab=99.57 E-value=2.4e-15 Score=139.89 Aligned_cols=69 Identities=45% Similarity=0.848 Sum_probs=66.2
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.|+|++|||++++|.++||+|||++++++|||+++++.+.++|++|++||++|+||.+|..||.+|..+
T Consensus 3 ~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 71 (77)
T 1hdj_A 3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEG 71 (77)
T ss_dssp CCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGG
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccc
Confidence 589999999999999999999999999999999998899999999999999999999999999998764
|
| >3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.56 E-value=6.8e-14 Score=159.72 Aligned_cols=225 Identities=16% Similarity=0.080 Sum_probs=165.4
Q ss_pred CCCccccccccccHHHHhhc-ccCCCcEEEEEeccCCchHHHHHHHHh-hcCCCeEEEEEEcccCCChhHHhhcCCCCCC
Q psy12972 962 LPYKLIVPLSATNVDAFLDN-WREDNKVHALLFQRSLPVRLRYLINAF-KHRTTIVFGVIVYDQEDSSSVFQRFKVPGDK 1039 (1578)
Q Consensus 962 lp~~vv~~it~~~~~~fl~~-~~~~~~~~VlfF~~~~~~~~~~~~~a~-~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~ 1039 (1578)
.+|++..+.+.+++++|++. . +.++|+||.+..++....+..++ .+++.+.|+.+ .+++++++++++.
T Consensus 4 ~gP~v~~l~s~~~~~~~~~~~~---~v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~~t-----~~~~v~~~~~v~~-- 73 (250)
T 3ec3_A 4 GSPPSKEILTLKQVQEFLKDGD---DVVILGVFQGVGDPGYLQYQDAANTLREDYKFHHT-----FSTEIAKFLKVSL-- 73 (250)
T ss_dssp -CCSSEECCCHHHHHHHHHHCS---SCEEEEECSCTTCHHHHHHHHHHHHHTTTCCEEEE-----CCHHHHHHHTCCS--
T ss_pred CCCCceecCCHHHHHHHHhcCC---CeEEEEEEcCCCchHHHHHHHHHHhhhcCcEEEEE-----CcHHHHHHcCCCC--
Confidence 45555666677889999987 6 88999999888888887777766 56799999999 7889999999975
Q ss_pred cEEEEeccC------CCCCccccccCCCCchhhhhhhhcCCCCCCcccCchhhhhhcCCCCceEEEEEecC-----Ccch
Q psy12972 1040 DSLLIFKED------KDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVKKLCVVLFSED-----SPEH 1108 (1578)
Q Consensus 1040 Ptllvfk~~------~~~~~~~l~~~~l~~~~L~~fI~~nk~p~vpeLts~~~~~~~c~~~~lcVll~~~~-----~~~~ 1108 (1578)
|+|++|+.+ .+....+-..+.++...|.+||..+.+|+++++|.++.....- .+.+|++++..+ .++.
T Consensus 74 p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~-~~~l~~~~~~~d~~~~~~~~~ 152 (250)
T 3ec3_A 74 GKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRYS-KRPLVVVYYSVDFSFDYRTAT 152 (250)
T ss_dssp SEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTTTHHHHSC-SSSEEEEEECCCCSTTTHHHH
T ss_pred CeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCccchhhhhc-cCccEEEEEecccccccchhH
Confidence 899999742 1222332111356778899999999999999999998876552 456787777533 2234
Q ss_pred HHHHHHHHHHHhhccCCCCcEEEEEEecCcchHHHHhccCCCCCCccccce-eEEEEEcCCcceEeeccCCccccccccc
Q psy12972 1109 DASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHI-AAMWRMDYKKIKYGWLLGDAVDDWKDYN 1187 (1578)
Q Consensus 1109 ~~~~~~lr~vA~~~~~~~~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~l-p~l~~~n~~~~kY~~l~~~~~~~~~~~~ 1187 (1578)
+.+++.++++|++ |+ + +.|+|+|++.+...++.|..+. .+. |.+++.|..+.+|.+..+ .
T Consensus 153 ~~~~~~~~~vAk~--~k-k-i~F~~~d~~~~~~~l~~fgl~~------~~~~p~~~~~~~~~~ky~~~~~---------~ 213 (250)
T 3ec3_A 153 QFWRNKVLEVAKD--FP-E-YTFAIADEEDYATEVKDLGLSE------SGGDVNAAILDESGKKFAMEPE---------E 213 (250)
T ss_dssp HHHHHHHHHHHTT--CT-T-SEEEEEETTTTHHHHHHTTCSS------CSCSCEEEEECTTSCEEECCCC---------S
T ss_pred HHHHHHHHHHHHh--hc-c-eeEEEEcHHHHHHHHHHcCCCc------cCCCcEEEEEcCCCceecCCcc---------c
Confidence 6688999999999 88 4 9999999998888888883332 122 466677766789975432 3
Q ss_pred ccHHHHHHHhhhhhcCCcccccccccccccccchhhh
Q psy12972 1188 TTKDRLDAGLRSLVNDPYNNLLYDTALKEISDEYIQS 1224 (1578)
Q Consensus 1188 ~t~e~l~~fL~~ll~g~~~~l~~~~~lp~l~dE~~~~ 1224 (1578)
+|.+.|..|++.+++|... |.+.+|..|.
T Consensus 214 ~t~~~i~~Fv~~~~~Gkl~--------p~~kSepiPe 242 (250)
T 3ec3_A 214 FDSDALREFVMAFKKGKLK--------PVIKSQPVPK 242 (250)
T ss_dssp CCHHHHHHHHHHHHTTCCC--------CCC-------
T ss_pred CCHHHHHHHHHHHHCCCcc--------ceeecCCCCC
Confidence 6899999999999999988 6666665554
|
| >2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.7e-15 Score=144.60 Aligned_cols=73 Identities=45% Similarity=0.818 Sum_probs=68.3
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.....|+|++|||+++++.++||+|||+++++||||+++.+.+.++|++|++||++|+||.+|+.||.++...
T Consensus 3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 75 (88)
T 2ctr_A 3 SGSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSA 75 (88)
T ss_dssp SCCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 3456799999999999999999999999999999999998899999999999999999999999999988753
|
| >2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.54 E-value=8.1e-14 Score=159.22 Aligned_cols=217 Identities=12% Similarity=0.163 Sum_probs=162.1
Q ss_pred hCCCccccccccccHHHHhhcccCCCcEEEEEeccCCchHHHHHHHHh-hcCCCeEEEEEEcccCCChhHHhhcCCCCCC
Q psy12972 961 KLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAF-KHRTTIVFGVIVYDQEDSSSVFQRFKVPGDK 1039 (1578)
Q Consensus 961 ~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~a~-~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~ 1039 (1578)
+++|++..+.+.++++.|++.. +.++|+||.+..++....+..++ .+++++.|+.+ .+.+++++|+++.
T Consensus 3 ~~gP~v~~l~s~~~~~~~l~~~---~v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~~~-----~~~~v~~~~~~~~-- 72 (252)
T 2h8l_A 3 LGSPASVPLRTEEEFKKFISDK---DASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHT-----NVESLVNEYDDNG-- 72 (252)
T ss_dssp ---CCEEECCSHHHHHHHHTSS---SCEEEEEESCTTSHHHHHHHHHHHHTTTTSCEEEE-----CCHHHHHHHCSSS--
T ss_pred cCCCCceeecCHHHHHHHhhcC---CeEEEEEECCCCChHHHHHHHHHHhcccCcEEEEE-----ChHHHHHHhCCCC--
Confidence 4556666655778899999875 77899999887777766666655 56799999999 6788999999974
Q ss_pred cEEEEeccC------CCCCccccccCCCCchhhhhhhhcCCCCCCcccCchhhhhhcCCCCceEEEEEecCCc----chH
Q psy12972 1040 DSLLIFKED------KDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVKKLCVVLFSEDSP----EHD 1109 (1578)
Q Consensus 1040 Ptllvfk~~------~~~~~~~l~~~~l~~~~L~~fI~~nk~p~vpeLts~~~~~~~c~~~~lcVll~~~~~~----~~~ 1109 (1578)
|++++|+.+ .+.+..+ ..++++...|.+||..+.+|+++++|..+.... . ...+|++++..+.. ..+
T Consensus 73 p~i~~fk~~~~~~kf~e~~~~y-~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~-~-~~~~~v~~~~~~~~~~~~~~~ 149 (252)
T 2h8l_A 73 EGIILFRPSHLTNKFEDKTVAY-TEQKMTSGKIKKFIQENIFGICPHMTEDNKDLI-Q-GKDLLIAYYDVDYEKNAKGSN 149 (252)
T ss_dssp EEEEEECCGGGCCTTSCSEEEC-CCSSCCHHHHHHHHHHHSSCSSCEECTTTHHHH-S-SSSEEEEEECCBTTTBHHHHH
T ss_pred CcEEEEcchhhccccccccccc-CCCCcCHHHHHHHHHhcccCCeeecccccHhhh-c-CCCeEEEEeecchhhcchhHH
Confidence 899999742 1222222 145567789999999999999999999998775 2 45788877753322 234
Q ss_pred HHHHHHHHHHhhccCCC--CcEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEEcCCcceEeeccCCccccccccc
Q psy12972 1110 ASRHTLRRFAQESRFVH--NNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKKIKYGWLLGDAVDDWKDYN 1187 (1578)
Q Consensus 1110 ~~~~~lr~vA~~~~~~~--~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~n~~~~kY~~l~~~~~~~~~~~~ 1187 (1578)
.+++.++++|++ |++ ..+.|+|+|++.++.+++.|.... + ..++|++.+.|..+.+|. +++ .
T Consensus 150 ~~~~~~~~vA~~--~~~k~~~~~F~~~d~~~~~~~~~~fgl~~---~-~~~~P~v~i~~~~~~ky~-~~~---------~ 213 (252)
T 2h8l_A 150 YWRNRVMMVAKK--FLDAGHKLNFAVASRKTFSHELSDFGLES---T-AGEIPVVAIRTAKGEKFV-MQE---------E 213 (252)
T ss_dssp HHHHHHHHHHHH--HHHTTCCCEEEEEETTTTHHHHGGGTCCC---C-SCSSCEEEEECTTSCEEE-CCS---------C
T ss_pred HHHHHHHHHHHH--ccccCceEEEEEEchHHHHHHHHHcCCCC---c-cCCCCEEEEEeCcCcEec-CCc---------c
Confidence 678899999999 764 359999999999999888884310 0 136888888887667886 343 2
Q ss_pred ccHHH--HHHHhhhhhcCCcc
Q psy12972 1188 TTKDR--LDAGLRSLVNDPYN 1206 (1578)
Q Consensus 1188 ~t~e~--l~~fL~~ll~g~~~ 1206 (1578)
+|.+. |..|++.++.|...
T Consensus 214 ~t~~~~~i~~F~~~~~~Gkl~ 234 (252)
T 2h8l_A 214 FSRDGKALERFLQDYFDGNLK 234 (252)
T ss_dssp CCTTSHHHHHHHHHHHHTCSC
T ss_pred cCcchHHHHHHHHHHHCCCcc
Confidence 55567 99999999999987
|
| >2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A | Back alignment and structure |
|---|
Probab=99.54 E-value=3.7e-14 Score=159.09 Aligned_cols=186 Identities=11% Similarity=0.064 Sum_probs=130.7
Q ss_pred CCcEEEEEE-----cCCCcccccccHHHHHHHHHh--CCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCcccccc
Q psy12972 873 TTPHLILFY-----SDWCFACLQVEPIFKKLMDEL--SPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFK 945 (1578)
Q Consensus 873 ~~~~LV~Fy-----apwCg~Ck~l~p~~~~lA~~l--~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~ 945 (1578)
.++++|.|| +|||+||+.+.|.|+++|+.+ .+. +.+++|||++++++|++|+|++ +||+++|++|.....+
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~-~Ptl~~~~~~~~~~~~ 97 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDK-IKLDIYSPFTHKEETEKYGVDR-VPTIVIEGDKDYGIRY 97 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTT-EEEEEECTTTCHHHHHHTTCCB-SSEEEEESSSCCCEEE
T ss_pred cCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCc-eEEEEecCcccHHHHHHcCCCc-CcEEEEECCCccccee
Confidence 567777777 899999999999999999888 444 9999999999999999999998 9999999877666666
Q ss_pred CCCCCHHHHHHHHHhhCCC-ccccccccccHHHHhhcccCCCcEEEE-EeccCCc---hHHHHHHHHhhcCCCeEEEEEE
Q psy12972 946 EPSFSVQKMVEFFRLKLPY-KLIVPLSATNVDAFLDNWREDNKVHAL-LFQRSLP---VRLRYLINAFKHRTTIVFGVIV 1020 (1578)
Q Consensus 946 ~G~~s~~~L~~fi~~~lp~-~vv~~it~~~~~~fl~~~~~~~~~~Vl-fF~~~~~---~~~~~~~~a~~~~~~v~Fg~v~ 1020 (1578)
.|.++.+++.+|+.+.+.. ..+..+++++++.+.... ..+.++ |+..... .....+...+...+.+.|+.++
T Consensus 98 ~G~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~~v~~~~vd 174 (229)
T 2ywm_A 98 IGLPAGLEFTTLINGIFHVSQRKPQLSEKTLELLQVVD---IPIEIWVFVTTSCGYCPSAAVMAWDFALANDYITSKVID 174 (229)
T ss_dssp ESCCCTTHHHHHHHHHHHHHTTCCSCCHHHHHHHTTCC---SCEEEEEEECTTCTTHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred cCCccHHHHHHHHHHHHhccCCccCCCHHHHHHHHhcC---CCeEEEEEECCCCcchHHHHHHHHHHHHHCCCeEEEEEE
Confidence 6999999999999876421 114556778888877542 444344 4432221 1122222222222578888885
Q ss_pred cccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhhc
Q psy12972 1021 YDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDN 1072 (1578)
Q Consensus 1021 ~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~ 1072 (1578)
++ .+.+++++|+|.+ .|++++ ++. ... ..+..+...+.+|++.
T Consensus 175 ~~--~~~~l~~~~~v~~-~Pt~~~--~G~--~~~--~~G~~~~~~l~~~l~~ 217 (229)
T 2ywm_A 175 AS--ENQDLAEQFQVVG-VPKIVI--NKG--VAE--FVGAQPENAFLGYIMA 217 (229)
T ss_dssp GG--GCHHHHHHTTCCS-SSEEEE--GGG--TEE--EESCCCHHHHHHHHHH
T ss_pred CC--CCHHHHHHcCCcc-cCEEEE--CCE--EEE--eeCCCCHHHHHHHHHH
Confidence 54 6788999999987 578887 221 211 2344555667777654
|
| >2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.54 E-value=4.2e-15 Score=138.94 Aligned_cols=73 Identities=53% Similarity=0.860 Sum_probs=67.6
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.....|+|++|||+++++.++||++||+++++||||+++ .+.+.++|++|++||++|+||.+|..||.+|..+
T Consensus 3 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 3 SGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp SSCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 345679999999999999999999999999999999997 5788999999999999999999999999988764
|
| >2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.53 E-value=5.2e-15 Score=151.69 Aligned_cols=103 Identities=15% Similarity=0.135 Sum_probs=94.7
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCC--cccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWC--FACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwC--g~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
..+|+++|++.+... +++++|.|||+|| ++|+.+.|.++++++++.+. +.|++||.+++++++.+|||.+ .||+
T Consensus 18 ~~vt~~~F~~~v~~~--~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~-v~~~KVdvDe~~~la~~ygV~s-iPTl 93 (137)
T 2qsi_A 18 TLVDEATVDDFIAHS--GKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR-LVAAEVAAEAERGLMARFGVAV-CPSL 93 (137)
T ss_dssp EEECTTTHHHHHHTS--SSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT-EEEEEECGGGHHHHHHHHTCCS-SSEE
T ss_pred cccCHhHHHHHHhcC--CCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC-cEEEEEECCCCHHHHHHcCCcc-CCEE
Confidence 378999999988432 4599999999999 99999999999999999876 9999999999999999999997 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
++|++|+.+....|..+.+.|.+++.+.+
T Consensus 94 ilFkdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 94 AVVQPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 99999999988889999999999998765
|
| >2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.53 E-value=4.8e-15 Score=141.46 Aligned_cols=72 Identities=53% Similarity=1.016 Sum_probs=67.9
Q ss_pred cccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 634 AVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 634 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
....|+|++|||+++++.++||+|||+++++||||+++++.+.++|++|++||++|+||.+|..||.+|...
T Consensus 14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 446799999999999999999999999999999999998899999999999999999999999999988654
|
| >1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A | Back alignment and structure |
|---|
Probab=99.52 E-value=2.6e-14 Score=159.87 Aligned_cols=187 Identities=13% Similarity=0.136 Sum_probs=130.5
Q ss_pred CCCcEEEEEEcC-CCcccccccHHHHHHHHHhCCCceEEEEEECcc--chhhHhHcCccccCCcEEEEcCCccc-cccCC
Q psy12972 872 YTTPHLILFYSD-WCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN--EQGLARRLGVGSQLPQIALLTDGRTS-FFKEP 947 (1578)
Q Consensus 872 ~~~~~LV~Fyap-wCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~--~~~L~~k~gV~~~~PTl~lf~~G~~~-~y~~G 947 (1578)
.+..++|.||++ ||++|+.+.|.|+++|+. .+. +.+++|||+. ++++|++|||.+ +||+++|++|+.. ..+.|
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~-v~~~~vd~~~~~~~~~~~~~~v~~-~Pt~~~~~~g~~~~~~~~G 97 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDK-LSYEIVDFDTPEGKELAKRYRIDR-APATTITQDGKDFGVRYFG 97 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTT-EEEEEEETTSHHHHHHHHHTTCCS-SSEEEEEETTBCCSEEEES
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCc-eEEEEEeCCCcccHHHHHHcCCCc-CceEEEEcCCceeeEEEec
Confidence 356678999999 999999999999999965 443 9999999999 999999999997 9999999988753 44558
Q ss_pred CCCHHHHHHHHHhhCCC-ccccccccccHHHHhhcccCCCcE-EEEEeccCC------chHHHHHHHHhhcC----CCeE
Q psy12972 948 SFSVQKMVEFFRLKLPY-KLIVPLSATNVDAFLDNWREDNKV-HALLFQRSL------PVRLRYLINAFKHR----TTIV 1015 (1578)
Q Consensus 948 ~~s~~~L~~fi~~~lp~-~vv~~it~~~~~~fl~~~~~~~~~-~VlfF~~~~------~~~~~~~~~a~~~~----~~v~ 1015 (1578)
.++.+++.+|+...+.. .-...++.++++.+.... ..+ ++.|+..-. .+.+..+. ..+. +.+.
T Consensus 98 ~~~~~~l~~~l~~~l~~~~~~~~l~~~~~~~~~~~~---~~~~~v~F~a~wC~~C~~~~p~~~~l~--~~~~~~~~~~v~ 172 (226)
T 1a8l_A 98 LPAGHEFAAFLEDIVDVSREETNLMDETKQAIRNID---QDVRILVFVTPTCPYCPLAVRMAHKFA--IENTKAGKGKIL 172 (226)
T ss_dssp CCCTTHHHHHHHHHHHHHHTCCCCCHHHHHHHTTCC---SCEEEEEEECSSCTTHHHHHHHHHHHH--HHHHHTTCCCEE
T ss_pred cCcHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcC---CCcEEEEEeCCCCCccHHHHHHHHHHH--HhcccccCCcEE
Confidence 88889999999775421 113345667777765442 444 444442211 22222222 2232 4788
Q ss_pred EEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhhc
Q psy12972 1016 FGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDN 1072 (1578)
Q Consensus 1016 Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~ 1072 (1578)
|+.++++ .+..++++|+|.+ .||+++|+++... ....+..+...+.+|++.
T Consensus 173 ~~~vd~~--~~~~l~~~~~v~~-~Pt~~~~~~G~~~---~~~~G~~~~~~l~~~l~~ 223 (226)
T 1a8l_A 173 GDMVEAI--EYPEWADQYNVMA-VPKIVIQVNGEDR---VEFEGAYPEKMFLEKLLS 223 (226)
T ss_dssp EEEEEGG--GCHHHHHHTTCCS-SCEEEEEETTEEE---EEEESCCCHHHHHHHHHH
T ss_pred EEEEEcc--cCHHHHHhCCCcc-cCeEEEEeCCcee---EEEcCCCCHHHHHHHHHH
Confidence 8888554 6788999999987 5799999654221 122344455667777654
|
| >2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A | Back alignment and structure |
|---|
Probab=99.52 E-value=1.7e-14 Score=143.33 Aligned_cols=105 Identities=20% Similarity=0.306 Sum_probs=95.6
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+++++.++|++.+ .+++++|.||++||++|+.+.|.++++++.+++. +.++.||++.++++|++|+|.+ +||++
T Consensus 3 v~~l~~~~~~~~~----~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~-~Pt~~ 76 (112)
T 2voc_A 3 IVKATDQSFSAET----SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDK-LKIVKIDVDENQETAGKYGVMS-IPTLL 76 (112)
T ss_dssp CEECCTTTHHHHH----SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTT-CEEEEEETTTCCSHHHHTTCCS-BSEEE
T ss_pred eEEecHHHHHHHh----CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-cEEEEEECCCCHHHHHHcCCCc-ccEEE
Confidence 3578999999877 3689999999999999999999999999999864 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCCCc
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK 965 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~ 965 (1578)
+|++|+....+.|..+.++|.+|+.+.++++
T Consensus 77 ~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 77 VLKDGEVVETSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHTTSCSC
T ss_pred EEeCCEEEEEEeCCCCHHHHHHHHHHHHHhh
Confidence 9999998777779999999999999988763
|
| >2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.52 E-value=8.2e-15 Score=138.00 Aligned_cols=73 Identities=45% Similarity=0.836 Sum_probs=66.5
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC--hhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--PTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
+....|+|++|||+++++.++||+|||+++++||||+++. +.+.++|++|++||++|+||.+|..||.+|..+
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 79 (82)
T 2ej7_A 5 SSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGP 79 (82)
T ss_dssp CSSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCS
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 3446799999999999999999999999999999999975 367889999999999999999999999988654
|
| >2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.51 E-value=8.8e-15 Score=140.89 Aligned_cols=73 Identities=42% Similarity=0.756 Sum_probs=66.8
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC--hhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--PTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
+....|+|++|||+++++.++||++||+++++||||+++. +.++++|++|++||++|+||.+|+.||..+...
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 79 (92)
T 2dmx_A 5 SSGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDS 79 (92)
T ss_dssp CCCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCS
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 3446799999999999999999999999999999999875 478899999999999999999999999988764
|
| >3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0 | Back alignment and structure |
|---|
Probab=99.51 E-value=1.4e-14 Score=142.69 Aligned_cols=104 Identities=21% Similarity=0.336 Sum_probs=94.5
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+..+|.++|.+.+... +++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.++++|++|+|.+ +||++
T Consensus 6 v~~l~~~~~~~~~~~~--~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~-~Pt~~ 81 (111)
T 3gnj_A 6 LEKLDTNTFEQLIYDE--GKACLVMFSRKNCHVCQKVTPVLEELRLNYEES-FGFYYVDVEEEKTLFQRFSLKG-VPQIL 81 (111)
T ss_dssp SEECCHHHHHHHHTTS--CCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTTCHHHHHHTTCCS-SCEEE
T ss_pred ceecCHHHHHHHHHhc--CCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCc-eEEEEEECCcChhHHHhcCCCc-CCEEE
Confidence 4568999999987544 689999999999999999999999999999875 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|++|+....+.|..+.++|.+|+.+.+
T Consensus 82 ~~~~g~~~~~~~g~~~~~~l~~~l~~~l 109 (111)
T 3gnj_A 82 YFKDGEYKGKMAGDVEDDEVEQMIADVL 109 (111)
T ss_dssp EEETTEEEEEEESSCCHHHHHHHHHHHH
T ss_pred EEECCEEEEEEeccCCHHHHHHHHHHHh
Confidence 9999998877779999999999998765
|
| >2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A | Back alignment and structure |
|---|
Probab=99.49 E-value=6.8e-15 Score=151.34 Aligned_cols=103 Identities=11% Similarity=0.135 Sum_probs=94.4
Q ss_pred eeccccccceecccCCCCcEEEEEEcCC--CcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDW--CFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~Fyapw--Cg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
.+|+++|++.+. ++++++|.||++| |++|+.++|.++++|+++.+..+.|++||.+++++++.+|||.+ .||++
T Consensus 21 ~~t~~~F~~~v~---~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~s-IPTli 96 (140)
T 2qgv_A 21 PVSESRLDDWLT---QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFR-FPATL 96 (140)
T ss_dssp ECCHHHHHHHHH---TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCS-SSEEE
T ss_pred cCCHHHHHHHHh---CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCcc-CCEEE
Confidence 689999999882 4789999999999 99999999999999999976448999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+|++|+.+....|..+.+.|.+++.+.+.
T Consensus 97 lFk~G~~v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 97 VFTGGNYRGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEECCEEEEEEecCCCHHHHHHHHHHHhc
Confidence 99999998888899999999999987763
|
| >2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ... | Back alignment and structure |
|---|
Probab=99.49 E-value=3.3e-14 Score=139.48 Aligned_cols=104 Identities=21% Similarity=0.475 Sum_probs=93.4
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++.++.++|.+.+.. .+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.++++|++|+|.+ +||++
T Consensus 4 v~~l~~~~f~~~~~~--~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 79 (108)
T 2trx_A 4 IIHLTDDSFDTDVLK--ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQNPGTAPKYGIRG-IPTLL 79 (108)
T ss_dssp EEECCTTTHHHHTTT--CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTTCTTHHHHTTCCS-SSEEE
T ss_pred ceecchhhHHHHHHh--cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-cEEEEEECCCCHHHHHHcCCcc-cCEEE
Confidence 457899999976643 4789999999999999999999999999999865 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|++|+....+.|..+.++|.+|+.+.+
T Consensus 80 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 80 LFKNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEeCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 9999998777779999999999998754
|
| >1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.49 E-value=2.6e-14 Score=145.74 Aligned_cols=104 Identities=22% Similarity=0.364 Sum_probs=93.6
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhC----CCceEEEEEECccchhhHhHcCccccC
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELS----PLGVGFFTVHVHNEQGLARRLGVGSQL 930 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~----~~~v~~a~VDc~~~~~L~~k~gV~~~~ 930 (1578)
++.++.++|.+.+... +++++|.||++||++|+.+.|.|+++++.++ +. +.++.|||+.+.++|++|+|.+ +
T Consensus 9 v~~l~~~~~~~~~~~~--~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~l~~~~~v~~-~ 84 (133)
T 1x5d_A 9 VIELTDDSFDKNVLDS--EDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGK-VKLAAVDATVNQVLASRYGIRG-F 84 (133)
T ss_dssp CEECCTTHHHHHTTTS--SSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTS-EEEEEEETTTCCHHHHHHTCCS-S
T ss_pred CEEcCHhhHHHHHhcC--CCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCc-EEEEEEECCCCHHHHHhCCCCe-e
Confidence 4578999999877543 6899999999999999999999999999986 44 9999999999999999999998 9
Q ss_pred CcEEEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 931 PQIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 931 PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
||+++|.+|+....+.|.++.++|.+|+.+.+
T Consensus 85 Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~ 116 (133)
T 1x5d_A 85 PTIKIFQKGESPVDYDGGRTRSDIVSRALDLF 116 (133)
T ss_dssp SEEEEEETTEEEEEECSCCSHHHHHHHHHHHH
T ss_pred CeEEEEeCCCceEEecCCCCHHHHHHHHHHHh
Confidence 99999999987777779999999999998765
|
| >1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=3e-14 Score=141.95 Aligned_cols=107 Identities=21% Similarity=0.378 Sum_probs=94.8
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC--ceEEEEEECccchhhHhHcCccccCCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHVHNEQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~--~v~~a~VDc~~~~~L~~k~gV~~~~PT 932 (1578)
++.++.++|++.+ ..+++++|.||++||++|+.+.|.++++++.+++. .+.++.|||+.++++|++|+|.+ +||
T Consensus 9 v~~l~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~-~Pt 84 (120)
T 1mek_A 9 VLVLRKSNFAEAL---AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRG-YPT 84 (120)
T ss_dssp EEECCTTTHHHHH---HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCS-SSE
T ss_pred cEEechhhHHHHH---ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCc-ccE
Confidence 4578999999866 34789999999999999999999999999998753 49999999999999999999998 999
Q ss_pred EEEEcCCccc--cccCCCCCHHHHHHHHHhhCCCc
Q psy12972 933 IALLTDGRTS--FFKEPSFSVQKMVEFFRLKLPYK 965 (1578)
Q Consensus 933 l~lf~~G~~~--~y~~G~~s~~~L~~fi~~~lp~~ 965 (1578)
+++|++|+.. ..+.|..+.++|.+|+.+.++++
T Consensus 85 ~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 85 IKFFRNGDTASPKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp EEEEESSCSSSCEECCCCSSHHHHHHHHHTTSCCC
T ss_pred EEEEeCCCcCCcccccCccCHHHHHHHHHhccCCC
Confidence 9999999865 66679999999999999988653
|
| >4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A | Back alignment and structure |
|---|
Probab=99.49 E-value=5.1e-13 Score=150.12 Aligned_cols=211 Identities=13% Similarity=0.152 Sum_probs=161.7
Q ss_pred cccccccccHHHHhhcccCCCcEEEEEeccCCchHHHHHHHHhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEe
Q psy12972 966 LIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIF 1045 (1578)
Q Consensus 966 vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvf 1045 (1578)
.+.+.|.+++++|++++ +.++|+||.+..++....+..++...+.+.|+.+ .+++++++++++. |+|++|
T Consensus 11 ~~~l~s~~~~~~~l~~~---~v~vVgff~~~~~~~~~~f~~~A~~l~~~~F~~t-----~~~~v~~~~~v~~--p~i~lf 80 (227)
T 4f9z_D 11 PTWLTDVPAAMEFIAAT---EVAVIGFFQDLEIPAVPILHSMVQKFPGVSFGIS-----TDSEVLTHYNITG--NTICLF 80 (227)
T ss_dssp CEECCSHHHHHHHHHTS---SEEEEEECSCSCSTHHHHHHHHTTTCTTSEEEEE-----CCHHHHHHTTCCS--SEEEEE
T ss_pred CeeeCCHHHHHHHHhcC---CeEEEEEecCCCchhHHHHHHHHHhCCCceEEEE-----CCHHHHHHcCCCC--CeEEEE
Confidence 35566778999999875 7888999988778888888877765578999998 6889999999974 899999
Q ss_pred ccCCCCCcccccc--CCCCchhhhhhhhcCCCCCCcccCchhhhhhcCCCCceEEEEEec-CCcchHHHHHHHHHHHhhc
Q psy12972 1046 KEDKDRPSASITM--NSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVKKLCVVLFSE-DSPEHDASRHTLRRFAQES 1122 (1578)
Q Consensus 1046 k~~~~~~~~~l~~--~~l~~~~L~~fI~~nk~p~vpeLts~~~~~~~c~~~~lcVll~~~-~~~~~~~~~~~lr~vA~~~ 1122 (1578)
+...+.+..+... +..+...|.+||..+.+|+++++|..+..+..-...+++++++.+ ...+.+.....++++|++
T Consensus 81 k~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~- 159 (227)
T 4f9z_D 81 RLVDNEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKL- 159 (227)
T ss_dssp ETTTTEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHH-
T ss_pred EecCcccccccccccCCCCHHHHHHHHHHhCCCceeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHH-
Confidence 8644444333211 246778899999999999999999988655442222567776754 456678889999999999
Q ss_pred cCCCCcEEEEEEecC--cchHHHHhccCCCCCCccccceeEEEEEcCCc-ceEeeccCCcccccccccccHHHHHHHhhh
Q psy12972 1123 RFVHNNIAFMYVFIE--KQPEFVNALTSPEDSSEISLHIAAMWRMDYKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRS 1199 (1578)
Q Consensus 1123 ~~~~~~v~F~~vd~~--~q~~~~~~f~~~~~~~~~~~~lp~l~~~n~~~-~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ 1199 (1578)
|+++ +.|+|+|++ ..+..++.|.... .++|.+.+.+..+ .+|.+..+ ++|.+.|..|++.
T Consensus 160 -~k~~-i~F~~vd~~~~~~~~~l~~fgl~~------~~~P~~~i~~~~~~~ky~~~~~---------~~t~~~i~~Fv~~ 222 (227)
T 4f9z_D 160 -FQGK-ILFILVDSGMKENGKVISFFKLKE------SQLPALAIYQTLDDEWDTLPTA---------EVSVEHVQNFCDG 222 (227)
T ss_dssp -TTTT-CEEEEEETTSGGGHHHHHHTTCCG------GGCSEEEEEESSSCCEEEETTC---------CCCHHHHHHHHHH
T ss_pred -hhCC-EEEEEeCCccHhHHHHHHHcCCCc------ccCCEEEEEECCCCccccCCcC---------CCCHHHHHHHHHH
Confidence 9987 999999996 4667888873221 4789888888766 46765433 3689999999999
Q ss_pred hhcCC
Q psy12972 1200 LVNDP 1204 (1578)
Q Consensus 1200 ll~g~ 1204 (1578)
++.|.
T Consensus 223 ~~~Gk 227 (227)
T 4f9z_D 223 FLSGK 227 (227)
T ss_dssp HHTTC
T ss_pred HhCCC
Confidence 99984
|
| >3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A | Back alignment and structure |
|---|
Probab=99.49 E-value=4.3e-14 Score=137.85 Aligned_cols=102 Identities=17% Similarity=0.304 Sum_probs=93.4
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+.+++.++|++.+ .+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+++++++|+|.+ +||++
T Consensus 5 v~~l~~~~~~~~~----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 78 (106)
T 3die_A 5 IVKVTDADFDSKV----ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVDENPSTAAKYEVMS-IPTLI 78 (106)
T ss_dssp CEECCTTTHHHHS----CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCS-BSEEE
T ss_pred eEECCHHHHHHHh----cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCcCHHHHHhCCCcc-cCEEE
Confidence 4578999999977 3789999999999999999999999999999876 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|++|+....+.|..+.++|.+++.+.+
T Consensus 79 ~~~~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 79 VFKDGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred EEeCCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 9999998877779999999999998653
|
| >4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.49 E-value=2.8e-14 Score=139.95 Aligned_cols=98 Identities=14% Similarity=0.167 Sum_probs=78.1
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
|.++|++.+ +.+++++|.|||+||++|+.+.|.++++++.+. ++.++.||++.+++++++|+|.+ +||+++|++
T Consensus 7 ~~~~~~~~~---~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~-~Pt~~~~~~ 80 (105)
T 4euy_A 7 TIEELATYI---EEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQDMQEIAGRYAVFT-GPTVLLFYN 80 (105)
T ss_dssp ---CCSSST---TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECCC---------CC-CCEEEEEET
T ss_pred CHHHHHHHH---hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCCCHHHHHhcCCCC-CCEEEEEeC
Confidence 567888876 457999999999999999999999999999984 49999999999999999999998 999999999
Q ss_pred CccccccCCCCCHHHHHHHHHhhC
Q psy12972 939 GRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 939 G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|+....+.|..+.++|.+++.+.+
T Consensus 81 G~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 81 GKEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp TEEEEEEESSCCHHHHHHHHHTTC
T ss_pred CeEEEEEeCCcCHHHHHHHHHHhh
Confidence 998877779999999999998764
|
| >2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A | Back alignment and structure |
|---|
Probab=99.48 E-value=1.9e-14 Score=132.32 Aligned_cols=66 Identities=41% Similarity=0.750 Sum_probs=61.2
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGT 703 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~ 703 (1578)
..|+|++|||+++++.++||++||++++++|||+++. +.++|++|++||++|+||.+|+.||.+|.
T Consensus 7 ~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~--~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 7 ETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD--GAEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp CCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT--CHHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcC--HHHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 5799999999999999999999999999999999864 36899999999999999999999999875
|
| >3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.48 E-value=8.2e-15 Score=171.63 Aligned_cols=202 Identities=16% Similarity=0.216 Sum_probs=133.3
Q ss_pred ccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeec---ccCccccccCCcccc
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYD---LFGTTDGFSGQDSAS 822 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~---~~~~~~~i~g~~~~~ 822 (1578)
.+.++..||++.+. +++++++|+||||||+||++++|.|+++|+.+++. .++.++|..+ .+|+..++.++
T Consensus 19 vv~lt~~~f~~~i~--~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~---- 92 (298)
T 3ed3_A 19 ISELTPKSFDKAIH--NTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGF---- 92 (298)
T ss_dssp CEECCHHHHHHHHT--SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBS----
T ss_pred eEEeCHHHHHHHHH--hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCcc----
Confidence 46778889999884 46789999999999999999999999999999874 5566666432 25555555554
Q ss_pred ccccccccCcccccccccc------------------ccCccC----ccccee-------EEEee-ccccccceecccCC
Q psy12972 823 RNFHNHMYNPFDDVFSEGF------------------NFPFEE----HDISLF-------HKLST-THWNFEKNYIPKSY 872 (1578)
Q Consensus 823 ~~~~~i~~~Ptiklf~~~~------------------~~~~~~----~~i~~~-------~vi~L-t~~nF~~~vl~~s~ 872 (1578)
||+.+|..+- ...|.+ +.+..+ .+..+ +.+++++.+.. .
T Consensus 93 ---------Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~--~ 161 (298)
T 3ed3_A 93 ---------PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRK--S 161 (298)
T ss_dssp ---------SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTS--C
T ss_pred ---------ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhc--C
Confidence 8887877552 122332 222221 22344 44566665522 2
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhH--hHcC-----c-------------cccCCc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLA--RRLG-----V-------------GSQLPQ 932 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~--~k~g-----V-------------~~~~PT 932 (1578)
+.+.+|.| +.- ....+.|+++|..+.+. +.|+.++..+-..+. ++++ | .. .|+
T Consensus 162 ~~~~vi~f-s~~----~~~~~~f~~~A~~~~~~-~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~-~P~ 234 (298)
T 3ed3_A 162 PKLSVVLF-SKQ----DKISPVYKSIALDWLGK-FDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSD-KSK 234 (298)
T ss_dssp SSEEEEEE-ESS----SSCCHHHHHHHHHTBTT-EEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCS-SCE
T ss_pred CceEEEEE-cCC----CcchHHHHHHHHHhhcC-cEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccC-CCe
Confidence 46666666 332 34568999999999886 999999865433333 3333 3 54 899
Q ss_pred EEEEcC--CccccccCCCCCHHHHHHHHHhhCC-Ccccccccc
Q psy12972 933 IALLTD--GRTSFFKEPSFSVQKMVEFFRLKLP-YKLIVPLSA 972 (1578)
Q Consensus 933 l~lf~~--G~~~~y~~G~~s~~~L~~fi~~~lp-~~vv~~it~ 972 (1578)
|++|+. ++...|.++..+.++|.+||.++.. .+.+..+|.
T Consensus 235 lv~~~~~~~~~~~y~g~~~~~~~i~~fi~~~~~~~p~~~~ls~ 277 (298)
T 3ed3_A 235 LVVFDADKDKFWEYEGNSINKNDISKFLRDTFSITPNEGPFSR 277 (298)
T ss_dssp EEEEETTTTEEEECCCSSCCHHHHHHHHHHHHTCCCSSSTTSH
T ss_pred EEEEcCCCCceEEeccccCCHHHHHHHHHhhcCCCCCcCCCch
Confidence 999974 4455555457899999999984331 123444544
|
| >3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A | Back alignment and structure |
|---|
Probab=99.48 E-value=4.1e-14 Score=139.22 Aligned_cols=102 Identities=22% Similarity=0.401 Sum_probs=92.3
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC--ceEEEEEECccchhhHhHcCccccCCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHVHNEQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~--~v~~a~VDc~~~~~L~~k~gV~~~~PT 932 (1578)
++.+|.++|++.+. +++++|.||++||++|+.+.|.|+++++.+... ++.++.|||+.++++|++|+|.+ +||
T Consensus 7 v~~l~~~~~~~~~~----~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~-~Pt 81 (111)
T 3uvt_A 7 VLALTENNFDDTIA----EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRG-YPT 81 (111)
T ss_dssp SEECCTTTHHHHHH----SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCS-SSE
T ss_pred ceEcChhhHHHHhc----CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCc-ccE
Confidence 35789999999874 679999999999999999999999999987633 49999999999999999999998 999
Q ss_pred EEEEcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 933 IALLTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 933 l~lf~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
+++|++|+....+.|..+.++|.+|+.++
T Consensus 82 ~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 82 LLLFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEEEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred EEEEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 99999999887788999999999999875
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=99.48 E-value=4e-14 Score=178.73 Aligned_cols=224 Identities=13% Similarity=0.069 Sum_probs=135.4
Q ss_pred HHHHhcCCCCCCh----hHHHHHH---------------------HHhhhcCCCChHHHHHH----HhhhhcCccccccc
Q psy12972 309 GQGMVSLDHVLPR----QYPHTLR---------------------ALQDKCLLREKGEVDQL----FLEDFGCTHSQLFR 359 (1578)
Q Consensus 309 GQ~lstr~dllP~----~~~~~L~---------------------~Lqd~~p~~~~~~~~~~----~~~~~g~~~~~~~~ 359 (1578)
||+++|+.+++|+ +.++++. .+||++|+.+.+.+.++ ....++....+++.
T Consensus 73 ~~f~~t~~~~~~~~~~~~~i~e~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~v~~v~~~~~~~l~~~~~~~~~~ 152 (543)
T 3c4z_A 73 QQFLRTHEQHGPALQLWKDIEDYDTADDALRPQKAQALRAAYLEPQAQLFCSFLDAETVARARAGAGDGLFQPLLRAVLA 152 (543)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHTSCTTTHHHHHHHHHHHHTSTTCTTCCTTSCHHHHHHHHCC---CTTHHHHHHHHH
T ss_pred HHHHhcCCchhHHHHHHhhhhhhccCchhhHHHHHHHHHHHhhCchhhhhhccCCHHHHhhhhcCCCchhhHHHHHHHHH
Confidence 8999999999999 7888888 67788888777766655 12222212222222
Q ss_pred ccCCCchhHHHHHHHHHhhhhhhhhhhHHHHHH----HHhCCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEE
Q psy12972 360 SFDENPIAAASLAQALQDKCLLREKGEVDQLFL----EDFGCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKV 434 (1578)
Q Consensus 360 ~f~~~p~~~~~~~~~l~~~~~~~~~~~v~~~~~----~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKV 434 (1578)
.+...|+.... ......+.+. +..+... +-|... +.||.|++|+||+|+.+ +|+.||||+
T Consensus 153 ~~~~~p~~~~~------------~~~~~~~~~~~~~~~~~~~~~-~~f~~~--~~LG~G~fG~Vy~a~~~~tg~~vAiK~ 217 (543)
T 3c4z_A 153 HLGQAPFQEFL------------DSLYFLRFLQWKWLEAQPMGE-DWFLDF--RVLGRGGFGEVFACQMKATGKLYACKK 217 (543)
T ss_dssp HHTTHHHHHHH------------TSHHHHHHHHHHHHHTSCCCG-GGEEEE--EEEEECSSSEEEEEEETTTCCEEEEEE
T ss_pred hhhcCchHhhh------------hhhhhhhhhhhhhhhcccCCh-hheEEE--EEEeeCCCeEEEEEEECCCCcEEEEEE
Confidence 22222221100 0000001111 1111111 223332 67999999999999975 799999999
Q ss_pred ecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCC
Q psy12972 435 QYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSS 514 (1578)
Q Consensus 435 q~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t 514 (1578)
........ ....-.+.+|.+.+.++. ++.|.-..-+....+
T Consensus 218 l~k~~~~~----------------------------------~~~~~~~~~E~~iL~~l~-----hp~Iv~l~~~~~~~~ 258 (543)
T 3c4z_A 218 LNKKRLKK----------------------------------RKGYQGAMVEKKILAKVH-----SRFIVSLAYAFETKT 258 (543)
T ss_dssp EEHHHHHH----------------------------------TTCHHHHHHHHHHHHHCC-----CTTBCCEEEEEECSS
T ss_pred EEhHHhhh----------------------------------hHHHHHHHHHHHHHHhcC-----CCCEeeEEEEEeeCC
Confidence 86432110 001123456776666652 343322222223345
Q ss_pred ceEEEEeccCCCcCCchhhHh---hcCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 515 TRVLTTEFIDGVKISDKEGLL---EKGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 515 ~~VLVME~i~G~~l~d~~~l~---~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
..+|||||++|.+|.+..... ..+++...+...+.+++ +..+|..|++|+|+||+|||+. .++++|||....
T Consensus 259 ~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~ 338 (543)
T 3c4z_A 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVE 338 (543)
T ss_dssp EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeee
Confidence 568999999999998763311 22467666665555555 7889999999999999999964 699999998643
|
| >2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.48 E-value=4.5e-14 Score=145.59 Aligned_cols=106 Identities=21% Similarity=0.333 Sum_probs=94.5
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC--ceEEEEEECccchhhHhHcCccccCCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHVHNEQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~--~v~~a~VDc~~~~~L~~k~gV~~~~PT 932 (1578)
++.++.++|++.+ ..+++++|.||++||++|+.+.|.|+++++.+.+. ++.++.|||+.+.++|++|+|.+ +||
T Consensus 19 v~~l~~~~~~~~~---~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~-~Pt 94 (140)
T 2dj1_A 19 VWVLNDGNFDNFV---ADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSG-YPT 94 (140)
T ss_dssp EEECCTTTHHHHH---TTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCS-SSE
T ss_pred CEEcChHhHHHHH---hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCc-cCe
Confidence 5678999999876 34789999999999999999999999999999764 39999999999999999999998 999
Q ss_pred EEEEcCCccccccCCCCCHHHHHHHHHhhCCCc
Q psy12972 933 IALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK 965 (1578)
Q Consensus 933 l~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~ 965 (1578)
+++|++|+ ...+.|.++.++|.+|+.+.+.++
T Consensus 95 ~~~~~~G~-~~~~~g~~~~~~l~~~l~~~~~~~ 126 (140)
T 2dj1_A 95 IKILKKGQ-AVDYDGSRTQEEIVAKVREVSQPD 126 (140)
T ss_dssp EEEEETTE-EEECCSCCCHHHHHHHHHHHHSSS
T ss_pred EEEEECCc-EEEcCCCCCHHHHHHHHHHhcCCC
Confidence 99999998 555669999999999999887654
|
| >2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti} | Back alignment and structure |
|---|
Probab=99.48 E-value=6e-14 Score=137.11 Aligned_cols=103 Identities=17% Similarity=0.377 Sum_probs=93.0
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++.++.++|.+.+. +.+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+++++++|+|.+ +||++
T Consensus 4 v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 79 (107)
T 2i4a_A 4 TLAVSDSSFDQDVL--KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGK-VTVAKVNIDDNPETPNAYQVRS-IPTLM 79 (107)
T ss_dssp EEECCTTTHHHHTT--TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTS-EEEEEEETTTCCHHHHHTTCCS-SSEEE
T ss_pred eeecchhhhhHHHH--hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCc-EEEEEEECCCCHHHHHhcCCCc-cCEEE
Confidence 46789999997764 34789999999999999999999999999999864 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
+|++|+....+.|..+.+.|.+|+.+.
T Consensus 80 ~~~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 80 LVRDGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHT
T ss_pred EEeCCEEEEEecCCCCHHHHHHHHHhc
Confidence 999999877777999999999999765
|
| >2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.48 E-value=7.8e-14 Score=141.86 Aligned_cols=104 Identities=23% Similarity=0.361 Sum_probs=92.3
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++.++.++|++.+.. .+++++|.||++||++|+.+.|.++++++.+++. +.++.|||+.+.++|++|+|.+ +||++
T Consensus 19 v~~l~~~~f~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~l~~~~~v~~-~Pt~~ 94 (130)
T 2dml_A 19 VIELTPSNFNREVIQ--SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV-VKVGAVNADKHQSLGGQYGVQG-FPTIK 94 (130)
T ss_dssp SEECCTTTHHHHTTT--CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT-SEEEEEETTTCHHHHHHHTCCS-SSEEE
T ss_pred cEECCHHHHHHHHhc--CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc-eEEEEEeCCCCHHHHHHcCCCc-cCEEE
Confidence 346889999986653 3789999999999999999999999999999875 9999999999999999999998 99999
Q ss_pred EEcCCcc-ccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRT-SFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~-~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|.+|.. ...+.|.++.++|.+|+.+.+
T Consensus 95 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~l 123 (130)
T 2dml_A 95 IFGANKNKPEDYQGGRTGEAIVDAALSAL 123 (130)
T ss_dssp EESSCTTSCEECCSCCSHHHHHHHHHHHH
T ss_pred EEeCCCCeEEEeecCCCHHHHHHHHHHHH
Confidence 9988765 556679999999999998765
|
| >3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0 | Back alignment and structure |
|---|
Probab=99.47 E-value=3.8e-14 Score=138.81 Aligned_cols=103 Identities=20% Similarity=0.327 Sum_probs=93.7
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+..+|.++|++.+ ..+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+++++++|+|.+ +||++
T Consensus 6 v~~l~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~i~~-~Pt~~ 80 (109)
T 3tco_A 6 TLVLTEENFDEVI---RNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGK-AVFGRLNVDENQKIADKYSVLN-IPTTL 80 (109)
T ss_dssp CEECCTTTHHHHH---HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred EEEecHHHHHHHH---hcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCC-ceEEEEccccCHHHHHhcCccc-CCEEE
Confidence 3568999999877 34789999999999999999999999999999875 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|++|+....+.|..+.++|.+++.+.+
T Consensus 81 ~~~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 81 IFVNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEcCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 9999998877779999999999998764
|
| >3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=5.7e-14 Score=150.85 Aligned_cols=108 Identities=16% Similarity=0.197 Sum_probs=92.3
Q ss_pred EEeeccccccceecccCCCCcEEEEEEc-------CCCcccccccHHHHHHHHHhC-----CCceEEEEEECccchhhHh
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYS-------DWCFACLQVEPIFKKLMDELS-----PLGVGFFTVHVHNEQGLAR 922 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~Fya-------pwCg~Ck~l~p~~~~lA~~l~-----~~~v~~a~VDc~~~~~L~~ 922 (1578)
++++|++||++.+. .+.+.+++|.||| +||++|+.+.|+|+++|+++. +. +.|++||+++++++++
T Consensus 20 vi~lt~~nF~~~v~-~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~-v~f~kvD~d~~~~la~ 97 (178)
T 3ga4_A 20 VITVTADNYPLLSR-GVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSL-NLFFTVDVNEVPQLVK 97 (178)
T ss_dssp EEECCTTTHHHHTT-CCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCC-EEEEEEETTTCHHHHH
T ss_pred CEECCHHHHHHHHc-ccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCC-EEEEEEECccCHHHHH
Confidence 56899999998663 3346789999999 499999999999999999986 54 9999999999999999
Q ss_pred HcCccccCCcEEEEcCCcccc------------cc---CC-CCCHHHHHHHHHhhCCCc
Q psy12972 923 RLGVGSQLPQIALLTDGRTSF------------FK---EP-SFSVQKMVEFFRLKLPYK 965 (1578)
Q Consensus 923 k~gV~~~~PTl~lf~~G~~~~------------y~---~G-~~s~~~L~~fi~~~lp~~ 965 (1578)
+|||++ +|||++|++|.... .| .| .++++.|.+||.+.++..
T Consensus 98 ~~~I~s-iPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~ 155 (178)
T 3ga4_A 98 DLKLQN-VPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNIS 155 (178)
T ss_dssp HTTCCS-SCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCC
T ss_pred HcCCCC-CCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCC
Confidence 999998 99999999886332 12 24 799999999999988754
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=4.8e-14 Score=163.74 Aligned_cols=107 Identities=21% Similarity=0.349 Sum_probs=97.8
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++++|.++|++.+ ..+.+++++|.||++||++|+.+.|.|+++++.+.+. +.|++|||+.++++|++|+|.+ +||++
T Consensus 9 v~~~~~~~f~~~~-~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~-~Pt~~ 85 (287)
T 3qou_A 9 IVNINESNLQQVL-EQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ-FILAKLDCDAEQMIAAQFGLRA-IPTVY 85 (287)
T ss_dssp EEECCTTTHHHHH-TTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS-SEEEEEETTTCHHHHHTTTCCS-SSEEE
T ss_pred cEECCHHHHHHHH-HhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC-eEEEEEeCccCHHHHHHcCCCC-CCeEE
Confidence 5679999999955 4445899999999999999999999999999999875 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+|++|+.+..+.|..+.+.+.+|+...+|.
T Consensus 86 ~~~~G~~~~~~~g~~~~~~l~~~l~~~lp~ 115 (287)
T 3qou_A 86 LFQNGQPVDGFQGPQPEEAIRALLDXVLPR 115 (287)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred EEECCEEEEEeeCCCCHHHHHHHHHHHcCC
Confidence 999999887777999999999999998865
|
| >1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.47 E-value=5e-14 Score=139.27 Aligned_cols=105 Identities=19% Similarity=0.371 Sum_probs=93.8
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+..+|.++|.+.+.+. +++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+++++++|+|.+ +||++
T Consensus 7 v~~l~~~~~~~~~~~~--~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 82 (112)
T 1t00_A 7 LKHVTDDSFEQDVLKN--DKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK-IEIVKLNIDENPGTAAKYGVMS-IPTLN 82 (112)
T ss_dssp CEEECTTTHHHHTTTC--SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred EEecchhhHHHHHhhC--CCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCC-eEEEEEEcCCCHHHHHhCCCCc-ccEEE
Confidence 3568999998877543 789999999999999999999999999999765 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+|++|+....+.|..+.++|.+++.+.++
T Consensus 83 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 83 VYQGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred EEeCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 99999987777799999999999987653
|
| >1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1 | Back alignment and structure |
|---|
Probab=99.47 E-value=7.3e-14 Score=138.34 Aligned_cols=105 Identities=18% Similarity=0.387 Sum_probs=94.8
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+..++.++|.+.+. +.+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.++++|++|+|.+ +||++
T Consensus 9 v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 84 (115)
T 1thx_A 9 VITITDAEFESEVL--KAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR-LKVVKLEIDPNPTTVKKYKVEG-VPALR 84 (115)
T ss_dssp EEECCGGGHHHHTT--TCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEESTTCHHHHHHTTCCS-SSEEE
T ss_pred eEEeeccchhhHhh--cCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEcCCCHHHHHHcCCCc-eeEEE
Confidence 56789999998764 34789999999999999999999999999999876 9999999999999999999997 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+|++|+....+.|..+.++|.+|+.+.++
T Consensus 85 ~~~~G~~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 85 LVKGEQILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEcCCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 99999887767799999999999988764
|
| >1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A | Back alignment and structure |
|---|
Probab=99.47 E-value=5.1e-14 Score=137.38 Aligned_cols=103 Identities=18% Similarity=0.351 Sum_probs=91.4
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++.++.++|.+.+ ..+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+++++++|+|.+ +||++
T Consensus 2 v~~l~~~~~~~~~---~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 76 (105)
T 1nsw_A 2 TMTLTDANFQQAI---QGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK-VTVAKLNVDENPETTSQFGIMS-IPTLI 76 (105)
T ss_dssp CEEECTTTHHHHH---SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT-CEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred ceeccHHhHHHHH---hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-cEEEEEECcCCHHHHHHcCCcc-ccEEE
Confidence 3578899999544 34689999999999999999999999999999775 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|++|+....+.|..+.++|.+++.+.+
T Consensus 77 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 77 LFKGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred EEeCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 9999988776779999999999987654
|
| >2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii} | Back alignment and structure |
|---|
Probab=99.47 E-value=2.8e-14 Score=148.44 Aligned_cols=101 Identities=9% Similarity=0.198 Sum_probs=88.4
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
|.++|++.|.. ..+++++|.|||+||++|+.+.|.++++|+++.+. +.|++||.+++++++++|+|.+ .||+++|++
T Consensus 28 t~~~f~~~v~~-~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~-v~f~kVDVDe~~e~a~~y~V~s-iPT~~fFk~ 104 (160)
T 2av4_A 28 SGWAVDQAIVN-EDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF-CVIYLVDITEVPDFNTMYELYD-PVSVMFFYR 104 (160)
T ss_dssp SHHHHHHHHHH-CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETTTCCTTTTTTTCCS-SEEEEEEET
T ss_pred CHHHHHHHHHh-cCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC-cEEEEEECCCCHHHHHHcCCCC-CCEEEEEEC
Confidence 45789888753 24789999999999999999999999999999876 9999999999999999999997 999999999
Q ss_pred Cccc--c-------ccCCCCC-HHHHHHHHHhhC
Q psy12972 939 GRTS--F-------FKEPSFS-VQKMVEFFRLKL 962 (1578)
Q Consensus 939 G~~~--~-------y~~G~~s-~~~L~~fi~~~l 962 (1578)
|+.+ . ...|... .++|.+++...+
T Consensus 105 G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 105 NKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp TEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred CEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 9886 3 4557766 888999987665
|
| >3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=99.47 E-value=4.3e-14 Score=146.43 Aligned_cols=106 Identities=18% Similarity=0.302 Sum_probs=96.0
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+..++.++|.+.+... +++++|.||++||++|+.+.|.|+++++.+.+. +.|+.|||+.++++|++|+|.+ +||++
T Consensus 8 v~~l~~~~f~~~~~~~--~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~-~Pt~~ 83 (140)
T 3hz4_A 8 IIEFEDMTWSQQVEDS--KKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS-AVFGRINIATNPWTAEKYGVQG-TPTFK 83 (140)
T ss_dssp EEEECHHHHHHHTTTC--SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEETTTCHHHHHHHTCCE-ESEEE
T ss_pred eEEcchHhHHHHHHhC--CCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc-eEEEEEECCcCHhHHHHCCCCc-CCEEE
Confidence 4578999999666543 899999999999999999999999999999875 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+|++|+....+.|..+.++|.+|+.+.++.
T Consensus 84 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 84 FFCHGRPVWEQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp EEETTEEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred EEeCCcEEEEEcCCCCHHHHHHHHHHHhcc
Confidence 999999887777999999999999988743
|
| >1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=6.1e-14 Score=142.09 Aligned_cols=103 Identities=23% Similarity=0.338 Sum_probs=90.9
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++.+|.++|++.+ +++++|.||++||++|+.+.|.++++++.+.+.++.++.||++.+.++|++|+|.+ +||++
T Consensus 9 v~~l~~~~f~~~~-----~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~-~Pt~~ 82 (126)
T 1x5e_A 9 VRVITDENWRELL-----EGDWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINA-LPTIY 82 (126)
T ss_dssp EEECCTTTHHHHT-----SSEEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred cEEecHHHHHHHh-----CCCEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcc-cCEEE
Confidence 5578999999855 23499999999999999999999999999876459999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+|++|+. ..+.|..+.++|.+|+.+.+..
T Consensus 83 ~~~~G~~-~~~~G~~~~~~l~~~l~~~~~~ 111 (126)
T 1x5e_A 83 HCKDGEF-RRYQGPRTKKDFINFISDKEWK 111 (126)
T ss_dssp EEETTEE-EECCSCCCHHHHHHHHHTCGGG
T ss_pred EEeCCeE-EEeecCCCHHHHHHHHHHHhhc
Confidence 9999985 5566999999999999987744
|
| >1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1 | Back alignment and structure |
|---|
Probab=99.46 E-value=7.2e-14 Score=136.82 Aligned_cols=104 Identities=16% Similarity=0.352 Sum_probs=93.2
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++.+|.++|.+.+... +++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+++++++|+|.+ +||++
T Consensus 3 v~~l~~~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 78 (107)
T 1dby_A 3 AGAVNDDTFKNVVLES--SVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK-LKCVKLNTDESPNVASEYGIRS-IPTIM 78 (107)
T ss_dssp CEEECHHHHHHHTTTC--SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHHTCCS-SCEEE
T ss_pred cEeccHHHHHHHHhcC--CCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCc-eEEEEEECCCCHHHHHHCCCCc-CCEEE
Confidence 3568899999876543 789999999999999999999999999999765 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|++|+....+.|..+.+++.+++.+.+
T Consensus 79 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 79 VFKGGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp EESSSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEeCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 9999998776779899999999998764
|
| >2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.8e-14 Score=140.49 Aligned_cols=71 Identities=34% Similarity=0.563 Sum_probs=65.6
Q ss_pred cccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 634 AVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 634 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
....|+|+||||+++++.++||+|||+++++||||+++ ++.+.++|++|++||++|+|+.+|+.||.....
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 85 (99)
T 2yua_A 14 YSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLS 85 (99)
T ss_dssp SCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCC
T ss_pred CCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccc
Confidence 44679999999999999999999999999999999996 578899999999999999999999999986554
|
| >2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=2e-14 Score=139.91 Aligned_cols=69 Identities=46% Similarity=0.854 Sum_probs=63.9
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC--hhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--PTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.|+|++|||++++|.++||+|||+++++||||+++. +.+.++|++|++||++|+||.+|+.||.+|..+
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~ 72 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREG 72 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC-
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 589999999999999999999999999999999975 458899999999999999999999999988654
|
| >1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 | Back alignment and structure |
|---|
Probab=99.46 E-value=3.1e-14 Score=137.65 Aligned_cols=71 Identities=30% Similarity=0.666 Sum_probs=64.9
Q ss_pred cccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC-------hhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 634 AVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND-------PTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 634 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-------~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
....|+|+||||+++++.++||+|||+++++||||+++. +.+.++|++|++||++|+||.+|+.||.....
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 90 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG 90 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCC
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccC
Confidence 346799999999999999999999999999999999863 56889999999999999999999999987654
|
| >3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A | Back alignment and structure |
|---|
Probab=99.46 E-value=5.1e-15 Score=174.10 Aligned_cols=102 Identities=34% Similarity=0.565 Sum_probs=0.0
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDS 712 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~ 712 (1578)
.+...|||++|||+++||.+|||+|||+|+++||||+++++.++++|++|++||++|+||.+|+.||+++......++..
T Consensus 24 ~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~ 103 (329)
T 3lz8_A 24 AMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGR 103 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCccc
Confidence 34457999999999999999999999999999999999888899999999999999999999999999854422111111
Q ss_pred CCcccCCCC--CCCcccccccCCCC
Q psy12972 713 ASRNFHNHM--YNPFDDVFSEGFNF 735 (1578)
Q Consensus 713 ~~~~~~~~~--~~~f~~~F~~~Fg~ 735 (1578)
+.++.+.+ ..+|.++|+.+||.
T Consensus 104 -~~~~~~~~f~~~~f~diF~~~Fg~ 127 (329)
T 3lz8_A 104 -QRQTHEQSYSQQDFDDIFSSMFGQ 127 (329)
T ss_dssp -------------------------
T ss_pred -ccccccCCcCCCchhhhhHhhhcC
Confidence 00100111 23577888877763
|
| >3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C* | Back alignment and structure |
|---|
Probab=99.46 E-value=4.5e-14 Score=141.45 Aligned_cols=101 Identities=19% Similarity=0.279 Sum_probs=90.0
Q ss_pred eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEE
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALL 936 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf 936 (1578)
..|.++|++.+.+ ..+++++|.||++||++|+.+.|.++++++.+.+ +.|+.||++.+++++++|+|.+ +||+++|
T Consensus 16 ~~t~~~f~~~l~~-~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~~~l~~~~~v~~-~Pt~~~~ 91 (116)
T 3qfa_C 16 IESKTAFQEALDA-AGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDDCQDVASECEVKS-MPTFQFF 91 (116)
T ss_dssp CCCHHHHHHHHHH-HTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTTTHHHHHHTTCCS-SSEEEEE
T ss_pred CCCHHHHHHHHHh-cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHcCCcc-ccEEEEE
Confidence 4678899987632 2589999999999999999999999999999876 8999999999999999999998 9999999
Q ss_pred cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 937 TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 937 ~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
++|+.+..+.|. +.++|.+++.+.+
T Consensus 92 ~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 92 KKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp SSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred eCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 999988777787 9999999998753
|
| >2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.46 E-value=7.3e-14 Score=142.63 Aligned_cols=104 Identities=20% Similarity=0.442 Sum_probs=93.2
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++.++.++|++.+. +.+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+++++++|+|.+ +||++
T Consensus 24 v~~l~~~~f~~~~~--~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~-~Pt~~ 99 (128)
T 2o8v_B 24 IIHLTDDSFDTDVL--KADGAILVDFWAEWCGPAKMIAPILDEIADEYQGK-LTVAKLNIDQNPGTAPKYGIRG-IPTLL 99 (128)
T ss_dssp SEEECTTTHHHHTT--TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTT-EEEEEEETTTCCTTSGGGTCCS-SSEEE
T ss_pred cEecChhhHHHHHH--hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEECCCCHHHHHHcCCCc-cCEEE
Confidence 35689999997664 34789999999999999999999999999999865 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|++|+....+.|..+.++|.+|+.+.+
T Consensus 100 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 100 LFKNGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEeCCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 9999998776779999999999998754
|
| >1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A | Back alignment and structure |
|---|
Probab=99.45 E-value=8.1e-14 Score=140.05 Aligned_cols=104 Identities=16% Similarity=0.277 Sum_probs=93.7
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+..+|.++|.+.+.+. +++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+.+++++|+|.+ +||++
T Consensus 15 ~~~~~~~~f~~~v~~~--~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~-v~~~~vd~d~~~~l~~~~~v~~-~Pt~~ 90 (119)
T 1w4v_A 15 FNIQDGPDFQDRVVNS--ETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGK-VVMAKVDIDDHTDLAIEYEVSA-VPTVL 90 (119)
T ss_dssp EECCSHHHHHHHTTTC--SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTS-SEEEEEETTTTHHHHHHTTCCS-SSEEE
T ss_pred EEecChhhHHHHHHcC--CCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEEEEeCCCCHHHHHHcCCCc-ccEEE
Confidence 5678999999877643 789999999999999999999999999999765 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|++|+....+.|..+.++|.+|+.+.+
T Consensus 91 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 91 AMKNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEeCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 9999988766779889999999998754
|
| >2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus} | Back alignment and structure |
|---|
Probab=99.45 E-value=7.7e-14 Score=147.48 Aligned_cols=105 Identities=21% Similarity=0.331 Sum_probs=95.1
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
.+.++.++|.+.+ ..+++++|.||++||++|+.+.|.|+++++.+.+. +.|++||++.+++++++|+|.+ +||++
T Consensus 49 ~~~l~~~~f~~~~---~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~~~~~~l~~~~~i~~-~Pt~~ 123 (155)
T 2ppt_A 49 VAGIDPAILARAE---RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ-VRLAKIDTQAHPAVAGRHRIQG-IPAFI 123 (155)
T ss_dssp EEECCHHHHHHHT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETTTSTHHHHHTTCCS-SSEEE
T ss_pred CccCCHHHHHHHH---hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC-EEEEEEeCCccHHHHHHcCCCc-CCEEE
Confidence 4578889999877 45789999999999999999999999999999875 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+|++|+....+.|..+.++|.+|+.+.++.
T Consensus 124 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 124 LFHKGRELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEeCCeEEEEecCCCCHHHHHHHHHHHhcc
Confidence 999999887777999999999999987754
|
| >2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A | Back alignment and structure |
|---|
Probab=99.45 E-value=7.4e-14 Score=136.60 Aligned_cols=105 Identities=21% Similarity=0.369 Sum_probs=92.8
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++++|.++|++.+ +.+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+++++++|+|.+ +||++
T Consensus 3 v~~l~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 77 (109)
T 2yzu_A 3 PIEVTDQNFDETL---GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGK-LLVAKLDVDENPKTAMRYRVMS-IPTVI 77 (109)
T ss_dssp CEECCTTTHHHHH---HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred ceEccHhHHHHHh---cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCc-eEEEEEECCCCHhHHHhCCCCc-CCEEE
Confidence 3578999999654 34789999999999999999999999999999865 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+|++|+....+.|..+.++|.+|+.+.++.
T Consensus 78 ~~~~g~~~~~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 78 LFKDGQPVEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHTTC--
T ss_pred EEeCCcEeeeEeCCCCHHHHHHHHHHHhhh
Confidence 999998776667989999999999988754
|
| >1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C | Back alignment and structure |
|---|
Probab=99.45 E-value=1.1e-13 Score=134.79 Aligned_cols=102 Identities=14% Similarity=0.370 Sum_probs=92.0
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
..+|.++|.+.+.. .+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.++++|++|+|.+ +||+++
T Consensus 3 ~~~~~~~~~~~~~~--~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~-~Pt~~~ 78 (105)
T 1fb6_A 3 QDVNDSSWKEFVLE--SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK-IAVYKLNTDEAPGIATQYNIRS-IPTVLF 78 (105)
T ss_dssp EECCTTTHHHHTTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCS-SSEEEE
T ss_pred eechhhhHHHHHhc--CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCc-eEEEEEcCcchHHHHHhCCCCc-ccEEEE
Confidence 46889999987654 3789999999999999999999999999999875 9999999999999999999998 999999
Q ss_pred EcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 936 LTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 936 f~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
|++|+....+.|..+.+.+.+++.+.
T Consensus 79 ~~~g~~~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 79 FKNGERKESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp EETTEEEEEEEECCCHHHHHHHHHHH
T ss_pred EeCCeEEEEEecCCCHHHHHHHHHhh
Confidence 99999877677889999999999765
|
| >2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=3.2e-14 Score=141.90 Aligned_cols=73 Identities=33% Similarity=0.540 Sum_probs=67.6
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.....|+|++|||+++++.++||+|||+++++||||+++ ++.+.++|++|++||++|+||.+|+.||.++..+
T Consensus 16 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 89 (112)
T 2ctq_A 16 SEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQ 89 (112)
T ss_dssp CCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHT
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhc
Confidence 345689999999999999999999999999999999997 6789999999999999999999999999987653
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1.3e-13 Score=165.40 Aligned_cols=147 Identities=10% Similarity=0.073 Sum_probs=100.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.+||+|++|.||+|+..+|++|||||.+++....- .+ + .... +............ ..+--..|.+
T Consensus 101 ~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr--~v---~---~~r~-~~~~~~~~~~~~~------~rl~A~kE~~ 165 (397)
T 4gyi_A 101 SRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFR--TV---K---ANRD-YLRNRSTGSWMYL------SRLAAIKEFA 165 (397)
T ss_dssp EEEEECSSEEEEEEECTTCCEEEEEEECTTEECCC--CC---C-----CE-ECTTSCHHHHHHH------HHHHHHHHHH
T ss_pred CEeeeCCceEEEEEECCCCCEEEEEEEecccccHH--HH---H---HHHH-HHHhhccccHHHH------HHHHHHHHHH
Confidence 68999999999999999999999999988653210 00 0 0000 0011111111111 1123357899
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHS 568 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHP 568 (1578)
|+.++... .+.+|+|+. ..+++||||||+|.++.++... .++..+...++.+ +..+|..|+||||+||
T Consensus 166 nL~rL~~~-----gv~vp~p~~--~~~~~LVME~i~G~~L~~l~~~----~~~~~l~~qll~~-l~~lH~~gIVHrDLKp 233 (397)
T 4gyi_A 166 FMKALYEE-----GFPVPEPIA--QSRHTIVMSLVDALPMRQVSSV----PDPASLYADLIAL-ILRLAKHGLIHGDFNE 233 (397)
T ss_dssp HHHHHHHT-----TCSCCCEEE--EETTEEEEECCSCEEGGGCCCC----SCHHHHHHHHHHH-HHHHHHTTEECSCCST
T ss_pred HHHHHHhc-----CCCCCeeee--ccCceEEEEecCCccHhhhccc----HHHHHHHHHHHHH-HHHHHHCCCcCCCCCH
Confidence 99999753 477888884 4577999999999998775321 2456666666654 5678999999999999
Q ss_pred CCCCCCe-------------eEEecCC
Q psy12972 569 GNDVNTW-------------LYPVDLG 582 (1578)
Q Consensus 569 GNilv~~-------------v~liDfG 582 (1578)
+|||+.. +++|||+
T Consensus 234 ~NILl~~dgd~~d~~~~~~~~~iID~~ 260 (397)
T 4gyi_A 234 FNILIREEKDAEDPSSITLTPIIIXFP 260 (397)
T ss_dssp TSEEEEEEECSSCTTSEEEEEEECCCT
T ss_pred HHEEEeCCCCcccccccccceEEEEeC
Confidence 9999641 6677777
|
| >2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.2e-13 Score=142.16 Aligned_cols=107 Identities=23% Similarity=0.426 Sum_probs=94.2
Q ss_pred EEeeccccccceecccC---------CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcC
Q psy12972 855 KLSTTHWNFEKNYIPKS---------YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLG 925 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s---------~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~g 925 (1578)
++.+|.++|.+.+.+.+ .+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+.++|++|+
T Consensus 11 v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~~~~l~~~~~ 89 (136)
T 2l5l_A 11 VIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ-IVIYKVDTEKEQELAGAFG 89 (136)
T ss_dssp EEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTT
T ss_pred eEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-EEEEEEeCCCCHHHHHHcC
Confidence 56788999998776422 4689999999999999999999999999999865 9999999999999999999
Q ss_pred ccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 926 VGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 926 V~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
|.+ +||+++| ++|+.. .+.|..+.++|.+|+.+.++.
T Consensus 90 v~~-~Pt~~~~~~~G~~~-~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 90 IRS-IPSILFIPMEGKPE-MAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp CCS-SCEEEEECSSSCCE-EEESCCCHHHHHHHHHHHHTS
T ss_pred CCC-CCEEEEECCCCcEE-EEeCCCCHHHHHHHHHHHhhc
Confidence 998 9999999 888876 445889999999999987754
|
| >2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A | Back alignment and structure |
|---|
Probab=99.44 E-value=7.4e-14 Score=135.19 Aligned_cols=102 Identities=23% Similarity=0.421 Sum_probs=92.3
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
+++|.++|++.+ +.+++++|.||++||++|+.+.|.++++++.+.+ +.++.||++.+++++++|+|.+ +||+++
T Consensus 2 ~~l~~~~~~~~~---~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~v~~-~Pt~~~ 75 (104)
T 2e0q_A 2 IHLDSKNFDSFL---ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDENPDIAARYGVMS-LPTVIF 75 (104)
T ss_dssp EECCTTTHHHHH---HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCS-SCEEEE
T ss_pred eecCHHHHHHHH---hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCCCHHHHHhCCccc-cCEEEE
Confidence 468899999877 3478999999999999999999999999999876 8999999999999999999998 999999
Q ss_pred EcCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 936 LTDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 936 f~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
|++|+....+.|..+.+++.+|+.+.++
T Consensus 76 ~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 76 FKDGEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred EECCeEhhhccCCCCHHHHHHHHHHHhc
Confidence 9999887777799999999999987653
|
| >2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.44 E-value=6e-14 Score=139.21 Aligned_cols=72 Identities=36% Similarity=0.728 Sum_probs=67.1
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
.....|+|++|||+++++.++||+|||++++++|||+++ ++.+.++|++|++||++|+||.+|+.||.+|..
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~ 85 (109)
T 2ctw_A 13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSL 85 (109)
T ss_dssp TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhccc
Confidence 455789999999999999999999999999999999997 478899999999999999999999999998865
|
| >3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.3e-13 Score=143.85 Aligned_cols=105 Identities=23% Similarity=0.410 Sum_probs=96.0
Q ss_pred EEEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 854 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 854 ~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
.++.++.++|.+.+ ..+++++|.||++||++|+.+.|.|+++++.+.+. +.++.||++.+++++++|+|.+ +||+
T Consensus 39 ~v~~l~~~~~~~~~---~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~-~~~~~vd~~~~~~l~~~~~v~~-~Pt~ 113 (148)
T 3p2a_A 39 EVINATAETLDKLL---QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK-VRFVKVNTEAEPALSTRFRIRS-IPTI 113 (148)
T ss_dssp CCEECCTTTHHHHT---TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCS-SSEE
T ss_pred CceecCHHHHHHHH---hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc-eEEEEEECcCCHHHHHHCCCCc-cCEE
Confidence 35678999999877 45799999999999999999999999999999765 9999999999999999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
++|++|+.+..+.|..+.++|.+|+.+.+.
T Consensus 114 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 143 (148)
T 3p2a_A 114 MLYRNGKMIDMLNGAVPKAPFDNWLDEQLS 143 (148)
T ss_dssp EEEETTEEEEEESSCCCHHHHHHHHHHHHH
T ss_pred EEEECCeEEEEEeCCCCHHHHHHHHHHHhc
Confidence 999999988778899999999999988764
|
| >3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.3e-13 Score=136.49 Aligned_cols=106 Identities=11% Similarity=0.238 Sum_probs=88.2
Q ss_pred EEeecc-ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 855 KLSTTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~Lt~-~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
++.++. ++|++.+.....+++++|.||++||++|+.+.|.++++++.++..++.++.||++.+++++++|+|.+ +||+
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~-~Pt~ 80 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISA-VPYF 80 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCS-SSEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCc-ccEE
Confidence 346777 88988774324478999999999999999999999999998643459999999999999999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
++|++|+....+.|. ..++|.+++.+.+
T Consensus 81 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~~ 108 (112)
T 3d6i_A 81 IIIHKGTILKELSGA-DPKEYVSLLEDCK 108 (112)
T ss_dssp EEEETTEEEEEECSC-CHHHHHHHHHHHH
T ss_pred EEEECCEEEEEecCC-CHHHHHHHHHHHH
Confidence 999999988777786 4567999998765
|
| >2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A | Back alignment and structure |
|---|
Probab=99.43 E-value=1.4e-13 Score=137.88 Aligned_cols=106 Identities=20% Similarity=0.374 Sum_probs=94.7
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+..++.++|.+.+... +++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.++++|++|+|.+ +||++
T Consensus 14 v~~l~~~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~i~~-~Pt~~ 89 (121)
T 2i1u_A 14 TIKVTDASFATDVLSS--NKPVLVDFWATWCGPCKMVAPVLEEIATERATD-LTVAKLDVDTNPETARNFQVVS-IPTLI 89 (121)
T ss_dssp SEECCTTTHHHHTTTC--SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred ceecCHHHHHHHHHhC--CCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEEEEECCCCHHHHHhcCCCc-CCEEE
Confidence 3578999998876543 789999999999999999999999999999764 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+|++|+....+.|..+.++|.+|+.+.++.
T Consensus 90 ~~~~g~~~~~~~G~~~~~~l~~~l~~~l~~ 119 (121)
T 2i1u_A 90 LFKDGQPVKRIVGAKGKAALLRELSDVVPN 119 (121)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHTCSCCCC
T ss_pred EEECCEEEEEecCCCCHHHHHHHHHHHHhh
Confidence 999998877777999999999999877653
|
| >2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A | Back alignment and structure |
|---|
Probab=99.42 E-value=3.2e-13 Score=135.42 Aligned_cols=104 Identities=20% Similarity=0.328 Sum_probs=89.1
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCC----CceEEEEEECccchhhHhHcCccccC
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP----LGVGFFTVHVHNEQGLARRLGVGSQL 930 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~----~~v~~a~VDc~~~~~L~~k~gV~~~~ 930 (1578)
+..++.++|.+.+.. .+++++|.||++||++|+.+.|.|+++++.+++ .++.++.|||+.++ +++ +|.+ +
T Consensus 9 v~~l~~~~f~~~v~~--~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~-~ 82 (121)
T 2djj_A 9 VTVVVAKNYNEIVLD--DTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQG-F 82 (121)
T ss_dssp SEECCTTTTTTSSSC--TTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSS-S
T ss_pred eEEecccCHHHHhhc--CCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCc-C
Confidence 346899999987643 478999999999999999999999999999986 24999999999876 776 9997 9
Q ss_pred CcEEEEcCCcc--ccccCCCCCHHHHHHHHHhhCCC
Q psy12972 931 PQIALLTDGRT--SFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 931 PTl~lf~~G~~--~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
||+++|.+|.. ...+.|.++.++|.+|+.+.++.
T Consensus 83 Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 83 PTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKY 118 (121)
T ss_dssp SEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSS
T ss_pred CeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCc
Confidence 99999988754 55667999999999999988754
|
| >3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A | Back alignment and structure |
|---|
Probab=99.42 E-value=1.9e-13 Score=141.13 Aligned_cols=106 Identities=26% Similarity=0.487 Sum_probs=93.0
Q ss_pred EEeeccccccceecccC---------CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcC
Q psy12972 855 KLSTTHWNFEKNYIPKS---------YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLG 925 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s---------~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~g 925 (1578)
++.+|..+|...+.+.+ .+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.++++|++|+
T Consensus 24 v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~ 102 (141)
T 3hxs_A 24 TIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGK-IYIYKVNVDKEPELARDFG 102 (141)
T ss_dssp CEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTT
T ss_pred cccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc-eEEEEEECCCCHHHHHHcC
Confidence 45788999988776533 4789999999999999999999999999999875 9999999999999999999
Q ss_pred ccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 926 VGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 926 V~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
|.+ +||+++| ++|+.. .+.|..+.++|.+|+.+.+.
T Consensus 103 v~~-~Pt~~~~~~~g~~~-~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 103 IQS-IPTIWFVPMKGEPQ-VNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp CCS-SSEEEEECSSSCCE-EEESCCCHHHHHHHHHHTTC
T ss_pred CCC-cCEEEEEeCCCCEE-EEeCCCCHHHHHHHHHHHHc
Confidence 998 9999999 566665 55699999999999988763
|
| >1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1 | Back alignment and structure |
|---|
Probab=99.42 E-value=1.2e-13 Score=140.19 Aligned_cols=104 Identities=21% Similarity=0.477 Sum_probs=87.6
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCc--------------ccccccHHHHHHHHHhCCCceEEEEEECccchhh
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCF--------------ACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGL 920 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg--------------~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L 920 (1578)
++.++.++|++.+. +.+++++|.||++||+ +|+.+.|.|+++++.+.+. +.+++||++.++++
T Consensus 5 v~~l~~~~f~~~~~--~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~-~~~~~vd~d~~~~l 81 (123)
T 1oaz_A 5 IIHLTDDSFDTDVL--KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGK-LTVAKLNIDQNPGT 81 (123)
T ss_dssp CEECCSTTHHHHTT--SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTSCTTT
T ss_pred cEecChhhHHHHHH--hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCC-eEEEEEECCCCHHH
Confidence 35689999987664 3478999999999999 9999999999999998765 99999999999999
Q ss_pred HhHcCccccCCcEEEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 921 ARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 921 ~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+++|+|.+ +||+++|++|+....+.|..+.++|.+|+.+.+
T Consensus 82 ~~~~~v~~-~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 82 APKYGIRG-IPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp GGGGTCCB-SSEEEEEESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred HHHcCCCc-cCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 99999998 999999999998777779999999999998754
|
| >2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.41 E-value=3.4e-14 Score=146.47 Aligned_cols=105 Identities=16% Similarity=0.301 Sum_probs=91.4
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCcc------c
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVG------S 928 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~------~ 928 (1578)
+..+|.++|++.+. .+..++++|.|||+||++|+.+.|.|+++++.+++.++.++.|||++++++|++|+|. +
T Consensus 9 v~~l~~~~f~~~~~-~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~~~ 87 (137)
T 2dj0_A 9 IKYFNDKTIDEELE-RDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTKQ 87 (137)
T ss_dssp CEECCTTHHHHHHH-HSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSSSC
T ss_pred EEEccHhhHHHHHh-cCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCcCC
Confidence 45689999999774 3345699999999999999999999999999998645999999999999999999998 8
Q ss_pred cCCcEEEEcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 929 QLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 929 ~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
+||+++|++|+.+..+.|..+.+.|.+|+.+.
T Consensus 88 -~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 88 -LPTLILFQGGKEAMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp -SSEEEEESSSSEEEEESCBCSSSCBCCCCCCH
T ss_pred -CCEEEEEECCEEEEEecCcCchHHHHHHHhcc
Confidence 99999999999887777888888887777543
|
| >2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.41 E-value=2e-13 Score=139.35 Aligned_cols=107 Identities=18% Similarity=0.292 Sum_probs=92.5
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC-ceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~-~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+..++.++|...+.. .+++++|.||++||++|+.+.|.|+++++.+++. .+.++.|||+.+..++++|+|.+ +||+
T Consensus 9 v~~l~~~~~~~~~~~--~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~-~Pt~ 85 (133)
T 2dj3_A 9 VKVVVGKTFDAIVMD--PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEG-FPTI 85 (133)
T ss_dssp SEECCTTTCCCCCTC--TTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSS-SSEE
T ss_pred eEEEcCCCHHHHhcc--CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCc-CCEE
Confidence 457899999998753 3789999999999999999999999999999752 39999999999999999999998 9999
Q ss_pred EEEcCCccc---cccCCCCCHHHHHHHHHhhCCC
Q psy12972 934 ALLTDGRTS---FFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 934 ~lf~~G~~~---~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
++|.+|... .+..|.++.++|.+|+.+.++.
T Consensus 86 ~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~ 119 (133)
T 2dj3_A 86 YFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATK 119 (133)
T ss_dssp EEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSS
T ss_pred EEEeCCCcccceEecCCCcCHHHHHHHHHHhccc
Confidence 999887643 2333668999999999998865
|
| >2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.41 E-value=3.9e-14 Score=136.24 Aligned_cols=67 Identities=37% Similarity=0.749 Sum_probs=62.2
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
..|+|++|||+++++.++||++||+++++||||+++. ..++|++|++||++|+||.+|+.||.++..
T Consensus 7 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~ 73 (92)
T 2o37_A 7 ETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTG--DTEKFKEISEAFEILNDPQKREIYDQYGLE 73 (92)
T ss_dssp CCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTC--CHHHHHHHHHHHHHHTSHHHHHHHHHHCHH
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hHHHHHHHHHHHHHHCCHHHHHHHHHHCHH
Confidence 5799999999999999999999999999999999854 357999999999999999999999998865
|
| >3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.41 E-value=1.6e-13 Score=138.00 Aligned_cols=104 Identities=18% Similarity=0.272 Sum_probs=89.5
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
..+|.++|.+.+.. .+++++|.||++||++|+.+.|.|+++++.+.+. +.++.|||+.++++|++|+|.+ +||+++
T Consensus 6 ~~l~~~~f~~~~~~--~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~-~Pt~~~ 81 (122)
T 3aps_A 6 IDLTPQTFNEKVLQ--GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGK-VRAGKVDCQAYPQTCQKAGIKA-YPSVKL 81 (122)
T ss_dssp EECCHHHHHHHTTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETTTCHHHHHHTTCCS-SSEEEE
T ss_pred hcCCHHHHHHHHhc--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEEEEeCcCCHHHHHHcCCCc-cceEEE
Confidence 46888999765653 3789999999999999999999999999999874 9999999999999999999998 999999
Q ss_pred EcCCccccccCCC----CCHHHHHHHHHhhCC
Q psy12972 936 LTDGRTSFFKEPS----FSVQKMVEFFRLKLP 963 (1578)
Q Consensus 936 f~~G~~~~y~~G~----~s~~~L~~fi~~~lp 963 (1578)
|.+|.....+.|. ++.++|.+|+.+.+.
T Consensus 82 ~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 82 YQYERAKKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp EEEEGGGTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred EeCCCccceeeccccCcCCHHHHHHHHHHHHH
Confidence 9776655444454 799999999987763
|
| >3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B | Back alignment and structure |
|---|
Probab=99.40 E-value=2.5e-13 Score=134.39 Aligned_cols=98 Identities=16% Similarity=0.386 Sum_probs=87.3
Q ss_pred eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEE
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALL 936 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf 936 (1578)
..+.++|++.+ ..+++++|.||++||++|+.+.|.++++++.+.+ +.++.||++.+++++++|+|.+ +||+++|
T Consensus 11 ~~~~~~f~~~~---~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~--~~~~~vd~~~~~~l~~~~~v~~-~Pt~~~~ 84 (109)
T 3f3q_A 11 FKTASEFDSAI---AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ--ADFYKLDVDELGDVAQKNEVSA-MPTLLLF 84 (109)
T ss_dssp CCSHHHHHHHT---TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCS-SSEEEEE
T ss_pred CCCHHHHHHHH---hcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHcCCCc-cCEEEEE
Confidence 35677888866 4579999999999999999999999999999865 8999999999999999999998 9999999
Q ss_pred cCCccccccCCCCCHHHHHHHHHhh
Q psy12972 937 TDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 937 ~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
++|+.+..+.|. +.++|.+++.+.
T Consensus 85 ~~G~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 85 KNGKEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp ETTEEEEEEESS-CHHHHHHHHHHH
T ss_pred ECCEEEEEEeCC-CHHHHHHHHHhh
Confidence 999988777786 779999999865
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=4.9e-13 Score=159.37 Aligned_cols=137 Identities=12% Similarity=0.090 Sum_probs=92.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+..-... .+ .-.|.+|+
T Consensus 30 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~--~~---------------------------------~~~~~~E~ 74 (350)
T 4b9d_A 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS--KE---------------------------------REESRREV 74 (350)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEECTTSCH--HH---------------------------------HHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCH--HH---------------------------------HHHHHHHH
Confidence 67999999999999964 89999999986432110 00 01356788
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhc-CCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEK-GFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~-~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +..-|.+=.++.+ ...-+|||||++|.+|.++...... .++...+...+.+++ ++.+|..|++||
T Consensus 75 ~il~~l~----HpnIV~~~~~~~~-~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHR 149 (350)
T 4b9d_A 75 AVLANMK----HPNIVQYRESFEE-NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHR 149 (350)
T ss_dssp HHHHHCC----CTTBCCEEEEEEE-TTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEET
T ss_pred HHHHHCC----CCCCCcEEEEEEE-CCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 8877763 3334555455432 3445799999999999887543222 245556655565655 888999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+||+|||+. .++++|||...
T Consensus 150 DlKp~NILl~~~g~vKl~DFGla~ 173 (350)
T 4b9d_A 150 DIKSQNIFLTKDGTVQLGDFGIAR 173 (350)
T ss_dssp TCCGGGEEECTTCCEEECSTTEES
T ss_pred cCCHHHEEECCCCCEEEcccccce
Confidence 9999999964 59999999764
|
| >1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1 | Back alignment and structure |
|---|
Probab=99.40 E-value=1.9e-13 Score=139.01 Aligned_cols=102 Identities=18% Similarity=0.219 Sum_probs=90.8
Q ss_pred EEeecc-ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 855 KLSTTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~Lt~-~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+..++. ++|++.+ +.+++++|.||++||++|+.+.|.++++++.+. ++.|+.||++.++++|++|+|.+ +||+
T Consensus 21 v~~l~~~~~f~~~~---~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~~~~l~~~~~v~~-~Pt~ 94 (125)
T 1r26_A 21 VVDVYSVEQFRNIM---SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADNNSEIVSKCRVLQ-LPTF 94 (125)
T ss_dssp CEEECCHHHHHHHH---HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCS-SSEE
T ss_pred eEECCCHHHHHHHH---ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCCHHHHHHcCCCc-ccEE
Confidence 456888 9999877 457899999999999999999999999999984 38999999999999999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
++|++|+....+.| .+.++|.+++.+.++
T Consensus 95 ~i~~~G~~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 95 IIARSGKMLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp EEEETTEEEEEEES-SCHHHHHHHHHHHHH
T ss_pred EEEeCCeEEEEEeC-CCHHHHHHHHHHHhc
Confidence 99999998776768 688999999987653
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=3.6e-13 Score=160.21 Aligned_cols=142 Identities=18% Similarity=0.172 Sum_probs=103.7
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.+.|..+ +.||.|++|.||+|+.+ +|+.||||+....-... .
T Consensus 72 p~~~y~~~--~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~-------------------------------~--- 115 (346)
T 4fih_A 72 PRSYLDNF--IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-------------------------------R--- 115 (346)
T ss_dssp GGGTEEEE--EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS-------------------------------G---
T ss_pred hhHhcEEe--EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH-------------------------------H---
Confidence 45667766 56999999999999975 79999999985321100 0
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
-.+.+|++.+.++ .|..-|.+=.++.+ ...-+|||||++|..|.++ +...+++...+...+.+++ ++.
T Consensus 116 ---~~~~~Ei~il~~l----~HpnIV~l~~~~~~-~~~~~ivmEy~~gg~L~~~--l~~~~l~e~~~~~~~~qi~~aL~y 185 (346)
T 4fih_A 116 ---ELLFNEVVIMRDY----QHENVVEMYNSYLV-GDELWVVMEFLEGGALTDI--VTHTRMNEEQIAAVCLAVLQALSV 185 (346)
T ss_dssp ---GGGHHHHHHHHHC----CCTTBCCEEEEEEE-TTEEEEEECCCTTEEHHHH--HHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHhC----CCCCCCcEEEEEEE-CCEEEEEEeCCCCCcHHHH--HHcCCCCHHHHHHHHHHHHHHHHH
Confidence 0135666666655 33333444444432 3445799999999999887 4456788888877777766 889
Q ss_pred HHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 556 IFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|..|++|||+||.|||+. .++++|||....
T Consensus 186 lH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 219 (346)
T 4fih_A 186 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ 219 (346)
T ss_dssp HHHTTEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred HHHCCcccccCCHHHEEECCCCCEEEecCcCcee
Confidence 9999999999999999964 699999997643
|
| >1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1 | Back alignment and structure |
|---|
Probab=99.40 E-value=2.9e-13 Score=132.92 Aligned_cols=99 Identities=17% Similarity=0.264 Sum_probs=85.8
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
+.++|++.+.+ +.+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.+++++++|+|.+ +||+++|++
T Consensus 8 ~~~~~~~~~~~-~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~-~Pt~~~~~~ 83 (107)
T 1gh2_A 8 SDPDFQPELSG-AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQCQGTAATNNISA-TPTFQFFRN 83 (107)
T ss_dssp SGGGHHHHHHH-TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCS-SSEEEEEET
T ss_pred CHHHHHHHHHh-CCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--CcEEEEEECccCHHHHHhcCCCc-ccEEEEEEC
Confidence 56888887643 347899999999999999999999999999984 38999999999999999999998 999999999
Q ss_pred CccccccCCCCCHHHHHHHHHhhC
Q psy12972 939 GRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 939 G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|+....+.| .+.++|.+|+.+.+
T Consensus 84 G~~~~~~~G-~~~~~l~~~l~~~l 106 (107)
T 1gh2_A 84 KVRIDQYQG-ADAVGLEEKIKQHL 106 (107)
T ss_dssp TEEEEEEES-SCHHHHHHHHHHHH
T ss_pred CeEEEEEeC-CCHHHHHHHHHHhc
Confidence 988776767 45566999998754
|
| >3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157} | Back alignment and structure |
|---|
Probab=99.40 E-value=3.4e-13 Score=150.97 Aligned_cols=105 Identities=21% Similarity=0.466 Sum_probs=96.3
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
..+|.++|++.+.+ .+++++|.||++||++|+.+.|.|+++++.+++. +.++.|||+.++++|++|+|.+ +||+++
T Consensus 15 ~~lt~~~f~~~v~~--~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~~~~l~~~~~v~~-~Pt~~~ 90 (222)
T 3dxb_A 15 IHLTDDSFDTDVLK--ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQNPGTAPKYGIRG-IPTLLL 90 (222)
T ss_dssp EECCTTTHHHHHTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCTTTGGGGTCCS-BSEEEE
T ss_pred eeCCHHHHHHHHHh--cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCCCHHHHHHcCCCc-CCEEEE
Confidence 46899999987654 4789999999999999999999999999999876 9999999999999999999998 999999
Q ss_pred EcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 936 LTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 936 f~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
|++|+....+.|..+.++|.+|+.+.++.
T Consensus 91 ~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 119 (222)
T 3dxb_A 91 FKNGEVAATKVGALSKGQLKEFLDANLAG 119 (222)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred EECCeEEEEeccccChHHHHHHHHhhccc
Confidence 99999887777999999999999988854
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=6.6e-13 Score=152.10 Aligned_cols=155 Identities=23% Similarity=0.242 Sum_probs=95.8
Q ss_pred cccccccceEEEEEEe-cCCCE--EEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVE--VAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~--VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
.+||+|++|+||+|+. .+|+. ||||+.+++.... .. ...++.....+.++. ....-..+..+.+
T Consensus 53 ~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~-~~----------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 119 (258)
T 1zth_A 53 GVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEF-DK----------MDEYLYGDERFDMRR--ISPKEKVFIWTEK 119 (258)
T ss_dssp EEEEECSSEEEEEEEEEETTEEEEEEEEEECCC------------------GGGTTTCTTSCC------CHHHHHHHHHH
T ss_pred CEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccch-hh----------HHHhhcccchhhhhc--cChHHHHHHHHHH
Confidence 6899999999999997 68999 9999988764211 00 001111111111110 0111233456789
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccC--CCcCCchhhHhhc--CCCHHHHHHHHHHHHHHHHH-HcC
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFID--GVKISDKEGLLEK--GFSLADVDRKLFTAFAEQIF-QTG 560 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~--G~~l~d~~~l~~~--~~~~~~v~~~l~~~~l~~i~-~~G 560 (1578)
|++++.++.+. .+.+|.++. ....+|||||+. |.....+...... ......++..++++ +..+| ..|
T Consensus 120 E~~~l~~l~~~-----~i~~p~~~~--~~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~-l~~lH~~~g 191 (258)
T 1zth_A 120 EFRNLERAKEA-----GVSVPQPYT--YMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVEN-VKRLYQEAE 191 (258)
T ss_dssp HHHHHHHHHHT-----TCCCCCEEE--EETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHH-HHHHHHTSC
T ss_pred HHHHHHHHHhC-----CCCCCeEEE--cCCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHH-HHHHHHHCC
Confidence 99999999753 467888875 357799999993 4333333221111 12344555555554 56789 999
Q ss_pred ccccCCCCCCCCCC-eeEEecCCch
Q psy12972 561 FVHADPHSGNDVNT-WLYPVDLGDK 584 (1578)
Q Consensus 561 ~vH~DpHPGNilv~-~v~liDfG~~ 584 (1578)
++|||+||+|||+. .++++|||..
T Consensus 192 ivHrDlkp~NILl~~~~~liDFG~a 216 (258)
T 1zth_A 192 LVHADLSEYNIMYIDKVYFIDMGQA 216 (258)
T ss_dssp EECSSCSTTSEEESSSEEECCCTTC
T ss_pred EEeCCCCHHHEEEcCcEEEEECccc
Confidence 99999999999965 3566666644
|
| >1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A | Back alignment and structure |
|---|
Probab=99.39 E-value=3.7e-13 Score=131.18 Aligned_cols=102 Identities=14% Similarity=0.307 Sum_probs=89.5
Q ss_pred Eeecc-ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 856 LSTTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 856 i~Lt~-~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
.++++ ++|.+.+.+ ..+++++|.||++||++|+.+.|.++++++.+++. +.++.||++.+++++++|+|.+ +||++
T Consensus 3 ~~l~~~~~~~~~l~~-~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 79 (106)
T 1xwb_A 3 YQVKDKADLDGQLTK-ASGKLVVLDFFATWCGPCKMISPKLVELSTQFADN-VVVLKVDVDECEDIAMEYNISS-MPTFV 79 (106)
T ss_dssp EECCSHHHHHHHHHH-HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred eecCCHHHHHHHHHh-cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCC-eEEEEEeccchHHHHHHcCCCc-ccEEE
Confidence 45677 888887743 25789999999999999999999999999998653 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
+|++|+....+.| .+.++|.+++.+.
T Consensus 80 ~~~~G~~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 80 FLKNGVKVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp EEETTEEEEEEES-CCHHHHHHHHHHT
T ss_pred EEcCCcEEEEEcC-CCHHHHHHHHHHh
Confidence 9999998777778 7889999999765
|
| >3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.39 E-value=3.3e-13 Score=137.35 Aligned_cols=88 Identities=24% Similarity=0.424 Sum_probs=81.9
Q ss_pred CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCC
Q psy12972 871 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFS 950 (1578)
Q Consensus 871 s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s 950 (1578)
..+++++|.||++||++|+++.|.++++++.+++. +.++.||++.++++|++|+|.+ +||+++|++|+....+.|..+
T Consensus 40 ~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~-v~~~~vd~d~~~~l~~~~~v~~-~Pt~~~~~~G~~~~~~~G~~~ 117 (128)
T 3ul3_B 40 MKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKR-IYLLKVDLDKNESLARKFSVKS-LPTIILLKNKTMLARKDHFVS 117 (128)
T ss_dssp SCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-EEEEEEEGGGCHHHHHHTTCCS-SSEEEEEETTEEEEEESSCCC
T ss_pred ccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEECCCCHHHHHHcCCCC-cCEEEEEECCEEEEEecCCCC
Confidence 34789999999999999999999999999999754 9999999999999999999998 999999999998888889999
Q ss_pred HHHHHHHHHh
Q psy12972 951 VQKMVEFFRL 960 (1578)
Q Consensus 951 ~~~L~~fi~~ 960 (1578)
.++|.+|+++
T Consensus 118 ~~~l~~~l~~ 127 (128)
T 3ul3_B 118 SNDLIALIKK 127 (128)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 9999999975
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.39 E-value=3.3e-13 Score=157.17 Aligned_cols=150 Identities=18% Similarity=0.106 Sum_probs=102.9
Q ss_pred hCCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHH
Q psy12972 395 FGCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINEL 473 (1578)
Q Consensus 395 lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 473 (1578)
.|...+.-|-.|+. -||.|++|.||+|+.+ +|+.||||+........ .
T Consensus 19 ~~~~~~gr~~~~~~-~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~--~---------------------------- 67 (290)
T 3fpq_A 19 VGMSNDGRFLKFDI-EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK--S---------------------------- 67 (290)
T ss_dssp EEECTTSSEEEEEE-EEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--H----------------------------
T ss_pred cCcCCCCceEEeee-EEecCcCcEEEEEEECCCCeEEEEEEEchhhCCH--H----------------------------
Confidence 44455555555653 5999999999999965 79999999986432110 0
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCC-c--eEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHH
Q psy12972 474 KVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSS-T--RVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFT 550 (1578)
Q Consensus 474 ~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t-~--~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~ 550 (1578)
..-.|.+|++.+.++. |..-|.+=.++.+... + -+|||||++|.+|.++.. ....++...+...+.+
T Consensus 68 -----~~~~~~~E~~il~~l~----HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~-~~~~l~~~~~~~~~~q 137 (290)
T 3fpq_A 68 -----ERQRFKEEAEMLKGLQ----HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK-RFKVMKIKVLRSWCRQ 137 (290)
T ss_dssp -----HHHHHHHHHHHHHTCC----CTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHhCC----CCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHH-hcCCCCHHHHHHHHHH
Confidence 0013567887776653 3333444444322111 1 379999999999998753 3345777666666666
Q ss_pred HH--HHHHHHcC--ccccCCCCCCCCCC----eeEEecCCchh
Q psy12972 551 AF--AEQIFQTG--FVHADPHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 551 ~~--l~~i~~~G--~vH~DpHPGNilv~----~v~liDfG~~~ 585 (1578)
++ +..+|..| ++|||+||.|||+. .++++|||.+.
T Consensus 138 i~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 138 ILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp HHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred HHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 55 78899999 99999999999963 59999999863
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=4.6e-13 Score=158.15 Aligned_cols=157 Identities=17% Similarity=0.073 Sum_probs=112.5
Q ss_pred hhhHHHHHHHHhCCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCC
Q psy12972 384 KGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYP 462 (1578)
Q Consensus 384 ~~~v~~~~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~ 462 (1578)
..++++.++..++.+....+-.+. ++||+|++|+||+|+.+ +|+.||||+.++......
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~-~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~------------------- 86 (321)
T 2c30_A 27 HEQFKAALRMVVDQGDPRLLLDSY-VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR------------------- 86 (321)
T ss_dssp HHHHHHHHHTTSCSSCHHHHEEEE-EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSH-------------------
T ss_pred HHHHHHHHhhccCCCCchhhhhcc-EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHH-------------------
Confidence 445666677777765544443333 48999999999999976 899999999876532210
Q ss_pred CCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHH
Q psy12972 463 KFDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLA 542 (1578)
Q Consensus 463 ~~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~ 542 (1578)
-.+.+|++.+.+++ ++.+.-+.-+.......+|||||++|.+|.++ +...+++..
T Consensus 87 ------------------~~~~~E~~~l~~l~-----h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~--l~~~~l~~~ 141 (321)
T 2c30_A 87 ------------------ELLFNEVVIMRDYQ-----HFNVVEMYKSYLVGEELWVLMEFLQGGALTDI--VSQVRLNEE 141 (321)
T ss_dssp ------------------HHHHHHHHHHTTCC-----CTTBCCEEEEEEETTEEEEEECCCCSCBHHHH--HTTCCCCHH
T ss_pred ------------------HHHHHHHHHHHhCC-----CCCcceEEEEEEECCEEEEEEecCCCCCHHHH--HHhcCCCHH
Confidence 01355666665542 33333222233345667899999999999887 345678888
Q ss_pred HHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 543 DVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 543 ~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
.+...+.+++ +..+|..|++|+|+||+|||+. .++++|||...
T Consensus 142 ~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~ 189 (321)
T 2c30_A 142 QIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCA 189 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeee
Confidence 8777777766 8899999999999999999965 59999999754
|
| >3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ... | Back alignment and structure |
|---|
Probab=99.39 E-value=3.3e-13 Score=131.46 Aligned_cols=99 Identities=20% Similarity=0.325 Sum_probs=87.3
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
+.++|++.+. ...+++++|.||++||++|+.+.|.++++++.+.+ +.++.||++.+++++++|+|.+ +||+++|++
T Consensus 7 ~~~~~~~~l~-~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~~~~~~~~~~~~v~~-~Pt~~~~~~ 82 (105)
T 3m9j_A 7 SKTAFQEALD-AAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVDDCQDVASESEVKS-MPTFQFFKK 82 (105)
T ss_dssp SHHHHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--SEEEEEETTTCHHHHHHTTCCB-SSEEEEEET
T ss_pred CHHHHHHHHH-hcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC--eEEEEEEhhhhHHHHHHcCCCc-CcEEEEEEC
Confidence 5567777653 22578999999999999999999999999999875 8999999999999999999998 999999999
Q ss_pred CccccccCCCCCHHHHHHHHHhhC
Q psy12972 939 GRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 939 G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|+....+.|. +.++|.+++.+.+
T Consensus 83 g~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 83 GQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp TEEEEEEESS-CHHHHHHHHHHHC
T ss_pred CeEEEEEeCC-CHHHHHHHHHHhC
Confidence 9988777787 9999999998753
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.38 E-value=6.9e-13 Score=161.67 Aligned_cols=142 Identities=18% Similarity=0.160 Sum_probs=104.0
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.+.|..+ +.||.|++|.||+|+.+ +|+.||||+....-.. . .
T Consensus 149 p~~~y~~~--~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-----------------------~--------~--- 192 (423)
T 4fie_A 149 PRSYLDNF--IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-----------------------R--------R--- 192 (423)
T ss_dssp GGGTEEEE--EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS-----------------------S--------G---
T ss_pred hhHhcEee--eEeccCcCcEEEEEEECCCCCEEEEEEEeccchh-----------------------H--------H---
Confidence 45566666 56999999999999965 7999999998532100 0 0
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
-.+.+|++.+.++ .|...|.+=.++.+ ...-+|||||++|..|.++ +...+++...+...+.+++ ++.
T Consensus 193 ---~~~~~Ei~il~~l----~HpnIV~l~~~~~~-~~~~~iVmEy~~gG~L~~~--i~~~~l~e~~~~~~~~qil~aL~y 262 (423)
T 4fie_A 193 ---ELLFNEVVIMRDY----QHENVVEMYNSYLV-GDELWVVMEFLEGGALTDI--VTHTRMNEEQIAAVCLAVLQALSV 262 (423)
T ss_dssp ---GGHHHHHHHHHHC----CCTTBCCEEEEEEE-TTEEEEEEECCTTEEHHHH--HHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHhC----CCCCCCceEEEEEE-CCEEEEEEeCCCCCcHHHH--HhccCCCHHHHHHHHHHHHHHHHH
Confidence 0135677666655 33334444444432 3445799999999999887 4566788888877777766 889
Q ss_pred HHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 556 IFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|..|++|||+||.|||+. .++++|||....
T Consensus 263 lH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~ 296 (423)
T 4fie_A 263 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ 296 (423)
T ss_dssp HHHTTEECCCCSTTTEEECTTCCEEECCCTTCEE
T ss_pred HHHCCeecccCCHHHEEEcCCCCEEEecCccceE
Confidence 9999999999999999964 699999997643
|
| >2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A | Back alignment and structure |
|---|
Probab=99.38 E-value=4.1e-13 Score=134.15 Aligned_cols=102 Identities=18% Similarity=0.355 Sum_probs=89.3
Q ss_pred EEeecc-ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 855 KLSTTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~Lt~-~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
++++++ ++|.+.+.+ ..+++++|.||++||++|+.+.|.++++++.+ ++.++.||++.+++++++|+|.+ +||+
T Consensus 15 v~~l~~~~~~~~~l~~-~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~-~Pt~ 89 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQ-HKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDKLEETARKYNISA-MPTF 89 (117)
T ss_dssp EEECCSTTHHHHHHHH-TTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTTSHHHHHHTTCCS-SSEE
T ss_pred eEEeCCHHHHHHHHHh-CCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCccHHHHHHcCCCc-cceE
Confidence 556777 889887643 25789999999999999999999999999987 48999999999999999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
++|++|+....+.| .+.++|.+++.+.+
T Consensus 90 ~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 90 IAIKNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp EEEETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred EEEeCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 99999998777768 68899999997653
|
| >1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A | Back alignment and structure |
|---|
Probab=99.38 E-value=3.5e-13 Score=133.00 Aligned_cols=104 Identities=18% Similarity=0.356 Sum_probs=89.8
Q ss_pred Eee-ccccccceeccc-CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 856 LST-THWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 856 i~L-t~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+.+ +.++|++.+... ..+++++|.||++||++|+.+.|.++++++.+.+ ++.++.||++.+++++++|+|.+ +||+
T Consensus 5 ~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~-~Pt~ 82 (112)
T 1ep7_A 5 IVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDAVAAVAEAAGITA-MPTF 82 (112)
T ss_dssp EEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTTHHHHHHHTCCB-SSEE
T ss_pred EEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCchHHHHHHcCCCc-ccEE
Confidence 345 567888877431 1268999999999999999999999999999976 49999999999999999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
++|++|+....+.|. +.++|.+|+.+.+
T Consensus 83 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 110 (112)
T 1ep7_A 83 HVYKDGVKADDLVGA-SQDKLKALVAKHA 110 (112)
T ss_dssp EEEETTEEEEEEESC-CHHHHHHHHHHHH
T ss_pred EEEECCeEEEEEcCC-CHHHHHHHHHHHh
Confidence 999999987666687 8999999998765
|
| >2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A | Back alignment and structure |
|---|
Probab=99.38 E-value=6.7e-13 Score=131.18 Aligned_cols=102 Identities=18% Similarity=0.317 Sum_probs=89.2
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc-cchhhHhHcCccccCCcE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-NEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~-~~~~L~~k~gV~~~~PTl 933 (1578)
++.++.++|.+.+.. ..+++++|.||++||++|+.+.|.++++++.+.+ +.++.||++ .+.+++++|+|.+ +||+
T Consensus 7 v~~l~~~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~--v~~~~vd~~~~~~~~~~~~~v~~-~Pt~ 82 (111)
T 2pu9_C 7 VTEVNKDTFWPIVKA-AGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD--VIFLKLDCNQENKTLAKELGIRV-VPTF 82 (111)
T ss_dssp EEEECTTTHHHHHTT-CTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSSTTHHHHHHHCCSB-SSEE
T ss_pred cEEechHHHHHHHHh-cCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC--eEEEEEecCcchHHHHHHcCCCe-eeEE
Confidence 457899999997743 2478999999999999999999999999999874 899999998 7899999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
+++++|+....+.|. +.++|.+++.+.
T Consensus 83 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~ 109 (111)
T 2pu9_C 83 KILKENSVVGEVTGA-KYDKLLEAIQAA 109 (111)
T ss_dssp EEESSSSEEEEEESS-CHHHHHHHHHHH
T ss_pred EEEeCCcEEEEEcCC-CHHHHHHHHHHh
Confidence 999999987666676 488999999764
|
| >2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.1e-13 Score=137.41 Aligned_cols=70 Identities=30% Similarity=0.501 Sum_probs=65.3
Q ss_pred ccCCCcccccccccC-CHHHHHHHhhhhhhhcCCCCCCC----hhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 635 VSLDPYETLGVPRTA-SLQEIRKNYKRLVVEWHPDKNND----PTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 635 ~~~d~y~iLgv~~~a-s~~eIk~ayr~l~~~~HPDk~~~----~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
...|+|++|||++++ |.++||+|||++++++|||+++. +.+.++|++|++||++|+||.+|+.||.++..
T Consensus 13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~ 87 (109)
T 2qsa_A 13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH 87 (109)
T ss_dssp TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence 367999999999999 99999999999999999999976 67889999999999999999999999998754
|
| >2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A | Back alignment and structure |
|---|
Probab=99.38 E-value=3.8e-13 Score=133.26 Aligned_cols=101 Identities=15% Similarity=0.300 Sum_probs=88.1
Q ss_pred eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEE
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALL 936 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf 936 (1578)
.++.++| +.+ ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.+++++++|+|.+ +||+++|
T Consensus 7 ~~~~~~f-~~~---~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~-~Pt~~~~ 79 (110)
T 2l6c_A 7 ITTEAGM-AHF---EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEARPELMKELGFER-VPTLVFI 79 (110)
T ss_dssp CGGGCSH-HHH---TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGGCHHHHHHTTCCS-SCEEEEE
T ss_pred cCCHHHH-HHH---HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcCCHHHHHHcCCcc-cCEEEEE
Confidence 4678888 555 346899999999999999999999999999875 38999999999999999999998 9999999
Q ss_pred cCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 937 TDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 937 ~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
++|+.+..+.|..+.++|.+++.+..++
T Consensus 80 ~~G~~v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 80 RDGKVAKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp ESSSEEEEEESCCCHHHHHHHHHTC---
T ss_pred ECCEEEEEEcCCCCHHHHHHHHHHHhhh
Confidence 9999887777989999999999887654
|
| >2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A | Back alignment and structure |
|---|
Probab=99.38 E-value=4.4e-13 Score=141.09 Aligned_cols=120 Identities=12% Similarity=0.192 Sum_probs=91.9
Q ss_pred Eeec-cccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 856 LSTT-HWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 856 i~Lt-~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+.++ .++|.+.+.. ..+++++|.||++||++|+.+.|.|+++++.+. ++.|+.||++.++++|++|+|.+ +||++
T Consensus 15 ~~l~~~~~~~~~~~~-~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~~~~l~~~~~v~~-~Pt~~ 90 (153)
T 2wz9_A 15 EEVGSAGQFEELLRL-KAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--QVSFVKLEAEGVPEVSEKYEISS-VPTFL 90 (153)
T ss_dssp EEECSHHHHHHHHHH-TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCS-SSEEE
T ss_pred EEcCCHHHHHHHHHh-cCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCCCHHHHHHcCCCC-CCEEE
Confidence 3455 5788876632 237899999999999999999999999999974 38999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCCCc------cccccccccHHHHhh
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK------LIVPLSATNVDAFLD 980 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~------vv~~it~~~~~~fl~ 980 (1578)
+|.+|+.+.++.| .+.++|.+|+.+.++.. .+..+++++++++..
T Consensus 91 ~~~~G~~~~~~~G-~~~~~l~~~i~~~l~~~~~~~~~~~~~l~~~~f~~~~~ 141 (153)
T 2wz9_A 91 FFKNSQKIDRLDG-AHAPELTKKVQRHASSGSFLPSAKVKVDTDPNSSSVDK 141 (153)
T ss_dssp EEETTEEEEEEES-SCHHHHHHHHHHHSCTTSSCSCCCCCCC----------
T ss_pred EEECCEEEEEEeC-CCHHHHHHHHHHHhccccCCCccccccCCCCChhhHHH
Confidence 9999988777767 57889999999887532 344556666666554
|
| >1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.37 E-value=6.2e-13 Score=137.41 Aligned_cols=104 Identities=24% Similarity=0.388 Sum_probs=81.7
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+++++.++|.+.+... ++ ++|.||++||++|+.+.|.|+++++.+.+. +.|+.||++.+.+++++|+|.+ +||++
T Consensus 35 v~~l~~~~~~~~~~~~--~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~-~Pt~~ 109 (140)
T 1v98_A 35 VVEADEKGFAQEVAGA--PL-TLVDFFAPWCGPCRLVSPILEELARDHAGR-LKVVKVNVDEHPGLAARYGVRS-VPTLV 109 (140)
T ss_dssp --------------CC--CE-EEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred cccCCHHHHHHHHHcC--CC-EEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCCCHHHHHHCCCCc-cCEEE
Confidence 4578999999887533 44 999999999999999999999999999865 9999999999999999999997 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+|++|+....+.|..+.++|.+|+.+.+.
T Consensus 110 ~~~~G~~~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 110 LFRRGAPVATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred EEeCCcEEEEEeCCCCHHHHHHHHHHHHc
Confidence 99999987777799999999999987653
|
| >2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A | Back alignment and structure |
|---|
Probab=99.37 E-value=3.5e-13 Score=140.35 Aligned_cols=105 Identities=13% Similarity=0.140 Sum_probs=78.4
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCC--CcccccccHHHHHHHHHhCCCceE--EEEEECccchhhHhHcCccccC
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDW--CFACLQVEPIFKKLMDELSPLGVG--FFTVHVHNEQGLARRLGVGSQL 930 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~Fyapw--Cg~Ck~l~p~~~~lA~~l~~~~v~--~a~VDc~~~~~L~~k~gV~~~~ 930 (1578)
+..+|.++|++.+. .++.++|.|+++| |++|+.+.|.|+++++++ +. +. |++||+++++++|++|+|.+ +
T Consensus 19 ~~~l~~~~f~~~i~---~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~-v~~~~~~Vd~d~~~~la~~~~V~~-i 92 (142)
T 2es7_A 19 WQPVEASTVDDWIK---RVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQ-FDWQVAVADLEQSEAIGDRFNVRR-F 92 (142)
T ss_dssp CEECCCC-----------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TT-SCCEEEEECHHHHHHHHHTTTCCS-S
T ss_pred CcccccccHHHHHH---hCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cc-cceeEEEEECCCCHHHHHhcCCCc-C
Confidence 34688899999873 3556899999887 999999999999999998 54 88 99999999999999999998 9
Q ss_pred CcEEEEcCCccccccCCCCCHHHHHHHHHhhCCCc
Q psy12972 931 PQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK 965 (1578)
Q Consensus 931 PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~ 965 (1578)
||+++|++|+....+.|.++.++|.+|+.+.+..+
T Consensus 93 PT~~~fk~G~~v~~~~G~~~~~~l~~~i~~~l~~~ 127 (142)
T 2es7_A 93 PATLVFTDGKLRGALSGIHPWAELLTLMRSIVDTP 127 (142)
T ss_dssp SEEEEESCC----CEESCCCHHHHHHHHHHHHC--
T ss_pred CeEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhccc
Confidence 99999999998877779999999999999887553
|
| >3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.37 E-value=4.8e-13 Score=134.82 Aligned_cols=99 Identities=12% Similarity=0.096 Sum_probs=82.8
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
.++|.++|.+.+.+.+.+++++|.||||||++|+.+.|.++++|+++.+ +.|++||+++. +++|+|.+ .||+++
T Consensus 6 ~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~--v~f~kvd~d~~---~~~~~v~~-~PT~~~ 79 (118)
T 3evi_A 6 REISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE--TKFVKAIVNSC---IQHYHDNC-LPTIFV 79 (118)
T ss_dssp EECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT--SEEEEEEGGGT---STTCCGGG-CSEEEE
T ss_pred EEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC--CEEEEEEhHHh---HHHCCCCC-CCEEEE
Confidence 4678999999886554455999999999999999999999999999863 89999999875 68999998 999999
Q ss_pred EcCCccccccCCC-------CCHHHHHHHHHh
Q psy12972 936 LTDGRTSFFKEPS-------FSVQKMVEFFRL 960 (1578)
Q Consensus 936 f~~G~~~~y~~G~-------~s~~~L~~fi~~ 960 (1578)
|++|+.+....|. .+.++|..++.+
T Consensus 80 fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 80 YKNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp EETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred EECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 9999977555553 456677777754
|
| >2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=5.5e-13 Score=134.00 Aligned_cols=104 Identities=15% Similarity=0.292 Sum_probs=91.6
Q ss_pred Eeeccccccceeccc-CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 856 LSTTHWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
..++.++|++.+... +.+++++|.||++||++|+.+.|.|+++++.+.+ +.++.||++.+++++++|+|.+ +||++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~~~~~~~~~v~~-~Pt~~ 92 (122)
T 2vlu_A 16 SVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDELKPIAEQFSVEA-MPTFL 92 (122)
T ss_dssp EECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred eccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCCCHHHHHHcCCCc-ccEEE
Confidence 357888999877541 2478999999999999999999999999999875 8999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+|++|+....+.|.. .++|.+|+.+.++
T Consensus 93 ~~~~G~~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 93 FMKEGDVKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp EEETTEEEEEEESSC-HHHHHHHHHHHHS
T ss_pred EEeCCEEEEEEeCcC-HHHHHHHHHHHhc
Confidence 999999877677877 8999999987764
|
| >1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1 | Back alignment and structure |
|---|
Probab=99.36 E-value=4.7e-13 Score=132.71 Aligned_cols=100 Identities=14% Similarity=0.343 Sum_probs=89.7
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
..+|.++|++.+ ..+++++|.||++||++|+.+.|.++++++.+.+ +.++.||++.+++++++|+|.+ +||+++
T Consensus 12 ~~~~~~~f~~~~---~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~--v~~~~vd~~~~~~~~~~~~v~~-~Pt~~~ 85 (112)
T 1syr_A 12 IVTSQAEFDSII---SQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK--MVFIKVDVDEVSEVTEKENITS-MPTFKV 85 (112)
T ss_dssp EECSHHHHHHHH---HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTTHHHHHHTTCCS-SSEEEE
T ss_pred EECCHHHHHHHH---ccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CEEEEEECCCCHHHHHHcCCCc-ccEEEE
Confidence 357889999977 3478999999999999999999999999999863 8999999999999999999998 999999
Q ss_pred EcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 936 LTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 936 f~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|++|+....+.|. +.++|.+|+.+.+
T Consensus 86 ~~~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 86 YKNGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EETTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred EECCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 9999887777787 9999999998754
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.1e-12 Score=153.42 Aligned_cols=137 Identities=15% Similarity=0.095 Sum_probs=97.2
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|+||+|+++ +|+.||||+.+..-.. ..-+
T Consensus 19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~-------------------------------------~~~~ 61 (299)
T 4asz_A 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDN-------------------------------------ARKD 61 (299)
T ss_dssp EEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHH-------------------------------------HHHH
T ss_pred eEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChH-------------------------------------HHHH
Confidence 57999999999999864 5889999998643111 0124
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh------------hcCCCHHHHHHHHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL------------EKGFSLADVDRKLFT 550 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~------------~~~~~~~~v~~~l~~ 550 (1578)
|.+|++.+.+++ |..-|.+=.++.+ ....+|||||++|.+|.++..-. ...++...+...+.+
T Consensus 62 f~~E~~il~~l~----HpnIV~l~g~~~~-~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 136 (299)
T 4asz_A 62 FHREAELLTNLQ----HEHIVKFYGVCVE-GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136 (299)
T ss_dssp HHHHHHHHTTCC----CTTBCCEEEEECS-SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCC----CCCCccEEEEEee-CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHH
Confidence 677887776653 4444555444432 34568999999999999874321 124677777776666
Q ss_pred HH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 551 AF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 551 ~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+. +..+|..|++|||++|.|||++ .+++.|||....+
T Consensus 137 ia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 178 (299)
T 4asz_A 137 IAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDV 178 (299)
T ss_dssp HHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHH
T ss_pred HHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceec
Confidence 66 7889999999999999999976 5999999987543
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.2e-12 Score=153.70 Aligned_cols=134 Identities=17% Similarity=0.164 Sum_probs=96.5
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||+|++|.||+|++++ .||||+.+..-... + ..-.|.+|++
T Consensus 42 ~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~-----------------------------~------~~~~f~~E~~ 84 (307)
T 3omv_A 42 TRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTP-----------------------------E------QFQAFRNEVA 84 (307)
T ss_dssp EECCCCSSSEEEEEESSS--EEEEEECCCSSCCH-----------------------------H------HHHHHHHHHH
T ss_pred eEEeeCCCcEEEEEEECC--cEEEEEEEecCCCH-----------------------------H------HHHHHHHHHH
Confidence 569999999999998753 69999986321100 0 0114677887
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.+++ |..-|.+=.+.. ...-+|||||++|.+|.+........++...+...+.++. +..+|..|++|||+
T Consensus 85 il~~l~----HpNIV~l~g~~~--~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDl 158 (307)
T 3omv_A 85 VLRKTR----HVNILLFMGYMT--KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDM 158 (307)
T ss_dssp HHTTCC----CTTBCCEEEEEC--SSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCC
T ss_pred HHHhCC----CCCEeeEEEEEE--CCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCcc
Confidence 776653 333343333321 2345899999999999987543445678877777777766 88899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
||.|||+. .+++.|||.+.
T Consensus 159 Kp~NILl~~~~~~Ki~DFGla~ 180 (307)
T 3omv_A 159 KSNNIFLHEGLTVKIGDFGLAT 180 (307)
T ss_dssp CSSSEEEETTEEEEECCCSSCB
T ss_pred CHHHEEECCCCcEEEeeccCce
Confidence 99999975 59999999864
|
| >3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A | Back alignment and structure |
|---|
Probab=99.36 E-value=5.3e-13 Score=140.15 Aligned_cols=102 Identities=15% Similarity=0.223 Sum_probs=89.6
Q ss_pred eccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEc
Q psy12972 858 TTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLT 937 (1578)
Q Consensus 858 Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~ 937 (1578)
.+.++|++.+.. +.+++++|.|||+||++|+.+.|.++++++.+.+. +.++.||++++++++++|+|.+ +||+++|+
T Consensus 9 ~~~~~~~~~i~~-~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~~~~l~~~~~v~~-~Pt~~~~~ 85 (149)
T 3gix_A 9 TSKKEVDQAIKS-TAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQTAVYTQYFDISY-IPSTVFFF 85 (149)
T ss_dssp CSHHHHHHHHHH-CCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTTCCHHHHHTTCCS-SSEEEEEE
T ss_pred CCHHHHHHHHHh-cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCcCHHHHHHcCCCc-cCeEEEEE
Confidence 466788887752 23789999999999999999999999999999876 9999999999999999999998 99999999
Q ss_pred CCccc---------cccCC-CCCHHHHHHHHHhhC
Q psy12972 938 DGRTS---------FFKEP-SFSVQKMVEFFRLKL 962 (1578)
Q Consensus 938 ~G~~~---------~y~~G-~~s~~~L~~fi~~~l 962 (1578)
+|+.+ ....| ..+.++|.+++...+
T Consensus 86 ~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 86 NGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp TTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHH
T ss_pred CCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHH
Confidence 99987 66668 889999999997654
|
| >2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica} | Back alignment and structure |
|---|
Probab=99.35 E-value=7.9e-13 Score=128.39 Aligned_cols=100 Identities=20% Similarity=0.332 Sum_probs=87.5
Q ss_pred eecc-ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 857 STTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 857 ~Lt~-~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
.+++ ++|++.+.+ ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.+++++++|+|.+ +||+++
T Consensus 3 ~i~~~~~~~~~l~~-~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~-~Pt~~~ 78 (104)
T 2vim_A 3 VLATAADLEKLINE-NKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQNEEAAAKYSVTA-MPTFVF 78 (104)
T ss_dssp ECCSHHHHHHHHHT-TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCS-SSEEEE
T ss_pred ecCCHHHHHHHHHh-cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccCCHHHHHHcCCcc-ccEEEE
Confidence 4555 778876643 257899999999999999999999999999986 48999999999999999999997 999999
Q ss_pred EcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 936 LTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 936 f~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
|++|+....+.| .+.++|.+|+.+.
T Consensus 79 ~~~g~~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 79 IKDGKEVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp EETTEEEEEEES-SCHHHHHHHHHHH
T ss_pred EeCCcEEEEEeC-CCHHHHHHHHHhh
Confidence 999998777768 6889999999765
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=6.1e-13 Score=157.79 Aligned_cols=129 Identities=16% Similarity=0.118 Sum_probs=93.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+.... ..+|+
T Consensus 64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------------------------------------------~~~E~ 101 (336)
T 4g3f_A 64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------------------------------------------RVEEL 101 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------------------------------------------CTHHH
T ss_pred cEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------------------------------------------HHHHH
Confidence 45999999999999965 799999999863210 01344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .|..-|.+=.++.+ ...-+|||||++|.+|.++.. ....++...+...+.+++ ++.+|..|++|||
T Consensus 102 ~il~~l----~HpnIV~l~~~~~~-~~~~~ivmEy~~gg~L~~~l~-~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRD 175 (336)
T 4g3f_A 102 VACAGL----SSPRIVPLYGAVRE-GPWVNIFMELLEGGSLGQLIK-QMGCLPEDRALYYLGQALEGLEYLHTRRILHGD 175 (336)
T ss_dssp HTTTTC----CCTTBCCEEEEEEE-TTEEEEEECCCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSC
T ss_pred HHHHhC----CCCCCCcEEEEEEE-CCEEEEEEeccCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence 444333 33333444444422 234579999999999998753 234578777777777766 8899999999999
Q ss_pred CCCCCCCCC----eeEEecCCchh
Q psy12972 566 PHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~----~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 176 lKp~NILl~~~g~~vKl~DFGla~ 199 (336)
T 4g3f_A 176 VKADNVLLSSDGSRAALCDFGHAL 199 (336)
T ss_dssp CCGGGEEECTTSCCEEECCCTTCE
T ss_pred cCHHHEEEeCCCCEEEEeeCCCCe
Confidence 999999963 49999999764
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=99.34 E-value=2.1e-12 Score=151.39 Aligned_cols=138 Identities=14% Similarity=0.049 Sum_probs=97.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+........ .+ . .-.+.+|+
T Consensus 38 ~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~--~~------------------~--------------~~~~~~E~ 83 (311)
T 4aw0_A 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIK--EN------------------K--------------VPYVTRER 83 (311)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--TT------------------C--------------HHHHHHHH
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCC--HH------------------H--------------HHHHHHHH
Confidence 67999999999999964 89999999986431100 00 0 01245666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .|..-|.+=.++.+ ...-+|||||++|..|.+... ....++...+...+.+++ ++.+|..|++|||
T Consensus 84 ~il~~l----~HpnIv~l~~~~~~-~~~~yivmEy~~gG~L~~~i~-~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRD 157 (311)
T 4aw0_A 84 DVMSRL----DHPFFVKLYFTFQD-DEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157 (311)
T ss_dssp HHHTTC----CCTTBCCEEEEEEC-SSEEEEEECCCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHhC----CCCCCCeEEEEEEe-CCEEEEEEecCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Confidence 666554 33333444444432 234579999999999988743 334677777766666665 8899999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
+||.|||+. .++++|||....
T Consensus 158 lKPeNILl~~~g~vKl~DFGla~~ 181 (311)
T 4aw0_A 158 LKPENILLNEDMHIQITDFGTAKV 181 (311)
T ss_dssp CSGGGEEECTTSCEEECCCTTCEE
T ss_pred CCHHHeEEcCCCCEEEEEcCCcee
Confidence 999999964 599999998643
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.6e-12 Score=152.84 Aligned_cols=138 Identities=13% Similarity=0.082 Sum_probs=98.5
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|++. +|+.||||+.+....... .-+
T Consensus 32 ~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~------------------------------------~~~ 75 (308)
T 4gt4_A 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPL------------------------------------REE 75 (308)
T ss_dssp EEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-C------------------------------------HHH
T ss_pred eEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHH------------------------------------HHH
Confidence 45999999999999973 578999999865432110 113
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh---------------hcCCCHHHHHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL---------------EKGFSLADVDRK 547 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~---------------~~~~~~~~v~~~ 547 (1578)
|.+|++.+.+++ |..-|.+=.+..+ ...-.|||||++|++|.++.... ...++..++...
T Consensus 76 f~~E~~il~~l~----HpNIV~l~g~~~~-~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i 150 (308)
T 4gt4_A 76 FRHEAMLRARLQ----HPNVVCLLGVVTK-DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150 (308)
T ss_dssp HHHHHHHHHHCC----CTTBCCEEEEECS-SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHH
T ss_pred HHHHHHHHHhCC----CCCCCCcceEEEE-CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHH
Confidence 677888777763 3333444444422 24568999999999999875321 124677777777
Q ss_pred HHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 548 LFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 548 l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+.++. ++.+|..|++|||++|.|||+. .+++.|||....+
T Consensus 151 ~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~ 195 (308)
T 4gt4_A 151 VAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREV 195 (308)
T ss_dssp HHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGG
T ss_pred HHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceec
Confidence 76666 8889999999999999999975 5999999987544
|
| >1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1 | Back alignment and structure |
|---|
Probab=99.34 E-value=1.5e-12 Score=131.36 Aligned_cols=103 Identities=18% Similarity=0.333 Sum_probs=89.4
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc-cchhhHhHcCccccCCcE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-NEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~-~~~~L~~k~gV~~~~PTl 933 (1578)
+..++.++|.+.+.. ..+++++|.||++||++|+.+.|.++++++.+.+ +.++.||++ .+++++++|+|.+ +||+
T Consensus 20 v~~l~~~~~~~~~~~-~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~~~~~~~~~~v~~-~Pt~ 95 (124)
T 1faa_A 20 VTEVNKDTFWPIVKA-AGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD--VIFLKLDCNQENKTLAKELGIRV-VPTF 95 (124)
T ss_dssp EEEECTTTHHHHHHH-TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSSTTHHHHHHHCCSS-SSEE
T ss_pred eEEecchhHHHHHHh-cCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC--CEEEEEecCcchHHHHHHcCCCe-eeEE
Confidence 457889999987743 2478999999999999999999999999999874 899999998 6889999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+++++|+....+.|.. .++|.+++.+..
T Consensus 96 ~~~~~G~~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 96 KILKENSVVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp EEEETTEEEEEEESSC-HHHHHHHHHHHT
T ss_pred EEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 9999999876666765 889999997653
|
| >2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=99.33 E-value=2e-12 Score=130.90 Aligned_cols=92 Identities=13% Similarity=0.250 Sum_probs=83.7
Q ss_pred CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEE--CccchhhHhHcCccccCCcEEEEc-CCccccccCC
Q psy12972 871 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVH--VHNEQGLARRLGVGSQLPQIALLT-DGRTSFFKEP 947 (1578)
Q Consensus 871 s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VD--c~~~~~L~~k~gV~~~~PTl~lf~-~G~~~~y~~G 947 (1578)
..+++++|.||++||++|+.+.|.++++++.+++ ++.++.|| ++.+.+++++|+|.+ +||+++|. +|+....+.|
T Consensus 24 ~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~d~~~~~~~~~~v~~-~Pt~~~~~~~G~~~~~~~G 101 (126)
T 2l57_A 24 KEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG-KFNIYYARLEEEKNIDLAYKYDANI-VPTTVFLDKEGNKFYVHQG 101 (126)
T ss_dssp CSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS-SCEEEEEETTSSHHHHHHHHTTCCS-SSEEEEECTTCCEEEEEES
T ss_pred hCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC-CeEEEEEeCCCCchHHHHHHcCCcc-eeEEEEECCCCCEEEEecC
Confidence 4578999999999999999999999999999974 49999999 999999999999998 99999998 8988776779
Q ss_pred CCCHHHHHHHHHhhCCC
Q psy12972 948 SFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 948 ~~s~~~L~~fi~~~lp~ 964 (1578)
..+.++|.+++.+.+.+
T Consensus 102 ~~~~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 102 LMRKNNIETILNSLGVK 118 (126)
T ss_dssp CCCHHHHHHHHHHHCCC
T ss_pred CCCHHHHHHHHHHHhcc
Confidence 99999999999988754
|
| >2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.8e-13 Score=129.68 Aligned_cols=62 Identities=32% Similarity=0.486 Sum_probs=59.0
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHh
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~ 697 (1578)
..|+|++|||+++++.++||+|||+++++||||+++++.+.++|++|++||++|+|+.+|+.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 58999999999999999999999999999999999988999999999999999999987763
|
| >2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=99.33 E-value=5.1e-13 Score=134.68 Aligned_cols=99 Identities=20% Similarity=0.410 Sum_probs=88.0
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
+.++|++.+ +.+++++|.||++||++|+.+.|.++++++.+.+.++.++.||++.+++++++|+|.+ +||+++|++
T Consensus 22 ~~~~f~~~l---~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~-~Pt~~~~~~ 97 (121)
T 2j23_A 22 SYDQFKQVT---GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRA-MPTFVFFKN 97 (121)
T ss_dssp SHHHHHHHH---SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCS-SSEEEEEET
T ss_pred CHHHHHHHH---cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCc-ccEEEEEEC
Confidence 447888876 4578999999999999999999999999998875458999999999999999999998 999999999
Q ss_pred CccccccCCCCCHHHHHHHHHhhC
Q psy12972 939 GRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 939 G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|+....+.|. +.++|.+|+.+.+
T Consensus 98 G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 98 GQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp TEEEEEEESS-CHHHHHHHHHHHT
T ss_pred CeEEeeEcCC-CHHHHHHHHHHhh
Confidence 9887666687 8999999998765
|
| >3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.33 E-value=6.4e-13 Score=136.80 Aligned_cols=101 Identities=17% Similarity=0.099 Sum_probs=90.8
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEEC---------ccchhhHhHcC
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV---------HNEQGLARRLG 925 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc---------~~~~~L~~k~g 925 (1578)
++.+|.++|++.+. . +++|.|||+||++|+.+.|.++++++.+. +.|+.||+ +.+++++++|+
T Consensus 18 v~~l~~~~~~~~~~---~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~~~~d~~~~l~~~~~ 89 (135)
T 3emx_A 18 LIYITPEEFRQLLQ---G--DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGERELSAARLEMNKAG 89 (135)
T ss_dssp EEECCHHHHHHHHT---S--SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCHHHHHHHHHHHHHHT
T ss_pred eeecCHHHHHHHhC---C--cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhhhhhhhhHHHHHHcC
Confidence 56789999998772 2 99999999999999999999999999885 89999999 88899999999
Q ss_pred ccccCCcEEEEcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 926 VGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 926 V~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
|.+ +||+++|++|+.+..+.|..+.+.+..++++.+.+
T Consensus 90 v~~-~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 90 VEG-TPTLVFYKEGRIVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp CCS-SSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC--
T ss_pred Cce-eCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHhCC
Confidence 998 99999999999888888999999999999988755
|
| >2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A | Back alignment and structure |
|---|
Probab=99.33 E-value=2.2e-12 Score=146.29 Aligned_cols=100 Identities=18% Similarity=0.241 Sum_probs=86.9
Q ss_pred EEeeccccccceecccCCCCcEEEEEE--cCCCcccccccHHHHHHHHHhCC--CceEEEEEECcc-----chhhHhHcC
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFY--SDWCFACLQVEPIFKKLMDELSP--LGVGFFTVHVHN-----EQGLARRLG 925 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~Fy--apwCg~Ck~l~p~~~~lA~~l~~--~~v~~a~VDc~~-----~~~L~~k~g 925 (1578)
++.+|..||++.+ +.++++||.|| ||||+ +.|.|+++|+.+.+ ..+.|++|||+. ++++|++|+
T Consensus 18 v~~Lt~~nF~~vi---~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~ 90 (248)
T 2c0g_A 18 CVDLDELSFEKTV---ERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYK 90 (248)
T ss_dssp CEECCTTTHHHHH---TTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTT
T ss_pred cEECCHHHHHHHH---hcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhC
Confidence 4578999999954 44789999999 99998 99999999999953 249999999998 899999999
Q ss_pred cc--ccCCcEEEEcCCcc--cccc--CCCCCHHHHHHHHHhhCC
Q psy12972 926 VG--SQLPQIALLTDGRT--SFFK--EPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 926 V~--~~~PTl~lf~~G~~--~~y~--~G~~s~~~L~~fi~~~lp 963 (1578)
|+ + ||||++|+ |+. ...+ .|.++.++|.+|+.+.++
T Consensus 91 V~~~~-~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 91 VDDKN-FPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp CCTTS-CCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSS
T ss_pred CCcCC-CCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhc
Confidence 99 8 99999999 873 3444 689999999999998875
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.2e-12 Score=153.08 Aligned_cols=137 Identities=15% Similarity=0.074 Sum_probs=94.9
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+-||.|++|.||+|+++ +|+.||||+.+..-.. ..-+
T Consensus 47 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~-------------------------------------~~~~ 89 (329)
T 4aoj_A 47 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASES-------------------------------------ARQD 89 (329)
T ss_dssp EEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHH-------------------------------------HHHH
T ss_pred EEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHH-------------------------------------HHHH
Confidence 46999999999999864 5899999998643111 0124
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh--------------hcCCCHHHHHHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL--------------EKGFSLADVDRKL 548 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~--------------~~~~~~~~v~~~l 548 (1578)
|.+|++.+.+++ |..-|.+=.++.+ ....+|||||++|.+|.++..-. ...++..++...+
T Consensus 90 f~~E~~il~~l~----HpnIV~l~g~~~~-~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 164 (329)
T 4aoj_A 90 FQREAELLTMLQ----HQHIVRFFGVCTE-GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164 (329)
T ss_dssp HHHHHHHHTTCC----CTTBCCEEEEECS-SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHH
T ss_pred HHHHHHHHHhCC----CCCCCcEEEEEEE-CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHH
Confidence 677888776653 4344444444422 34568999999999998864311 1236666676766
Q ss_pred HHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 549 FTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 549 ~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
.++. +..+|..|++|||+||.|||++ .+++.|||....+
T Consensus 165 ~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~ 208 (329)
T 4aoj_A 165 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 208 (329)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred HHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceec
Confidence 6666 7889999999999999999965 5999999987433
|
| >1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1 | Back alignment and structure |
|---|
Probab=99.33 E-value=1.1e-12 Score=133.14 Aligned_cols=103 Identities=17% Similarity=0.313 Sum_probs=89.3
Q ss_pred Eee-ccccccceeccc-CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 856 LST-THWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 856 i~L-t~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+++ |.++|++.+... ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.+.+++++|+|.+ +||+
T Consensus 19 ~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~~~~l~~~~~v~~-~Pt~ 95 (124)
T 1xfl_A 19 IACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDELKSVASDWAIQA-MPTF 95 (124)
T ss_dssp EEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTSHHHHHHTTCCS-SSEE
T ss_pred EEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECccCHHHHHHcCCCc-cCEE
Confidence 345 668888877542 147899999999999999999999999999986 49999999999999999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
++|++|+......| .+.++|.+++.+.+
T Consensus 96 ~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 96 MFLKEGKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp EEEETTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred EEEECCEEEEEEeC-CCHHHHHHHHHHhc
Confidence 99999998776767 58899999998765
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=99.33 E-value=2.9e-12 Score=147.99 Aligned_cols=137 Identities=15% Similarity=0.110 Sum_probs=91.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+...... . + .+-.+.+|+
T Consensus 19 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~--~--------------------------~------~~~~~~~Ei 64 (275)
T 3hyh_A 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK--S--------------------------D------MQGRIEREI 64 (275)
T ss_dssp EEEEC---CCEEEEECTTTCCEEEEEEEECC----------------------------------------CHHHHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCC--H--------------------------H------HHHHHHHHH
Confidence 67999999999999964 89999999986532110 0 0 011356777
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.++++. |..-|.+=.++.+ ...-+|||||++| .+.+... ....++..++...+.+++ ++.+|..|++|||
T Consensus 65 ~il~~l~----HpnIv~~~~~~~~-~~~~~ivmEy~~g-~L~~~l~-~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRD 137 (275)
T 3hyh_A 65 SYLRLLR----HPHIIKLYDVIKS-KDEIIMVIEYAGN-ELFDYIV-QRDKMSEQEARRFFQQIISAVEYCHRHKIVHRD 137 (275)
T ss_dssp HHHHHCC----CTTBCCEEEEEEC-SSEEEEEEECCCE-EHHHHHH-HSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHCC----CCCCCeEEEEEEE-CCEEEEEEeCCCC-CHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence 7776653 3333444455432 3445799999954 6655432 345677777776666666 7899999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
+||.|||+. .++++|||.+..
T Consensus 138 iKP~NILl~~~~~vkl~DFGla~~ 161 (275)
T 3hyh_A 138 LKPENLLLDEHLNVKIADFGLSNI 161 (275)
T ss_dssp CCTTTEEECTTCCEEECCSSCC--
T ss_pred CChHHeEECCCCCEEEeecCCCee
Confidence 999999964 599999998743
|
| >2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.4e-13 Score=133.75 Aligned_cols=103 Identities=23% Similarity=0.411 Sum_probs=91.4
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+.+++.++|.+.+.. .+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+.+++++|+|.+ +||++
T Consensus 3 v~~l~~~~~~~~~~~--~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 78 (106)
T 2yj7_A 3 VIEVTDENFEQEVLK--SDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGK-VKVVKVNVDENPNTAAQYGIRS-IPTLL 78 (106)
Confidence 457889999987753 3789999999999999999999999999998764 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
+|++|+....+.|..+.+++.+|+.+.
T Consensus 79 ~~~~g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 79 LFKNGQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 999998877777888889999998754
|
| >2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1.5e-12 Score=130.09 Aligned_cols=93 Identities=20% Similarity=0.318 Sum_probs=81.4
Q ss_pred ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCc
Q psy12972 861 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGR 940 (1578)
Q Consensus 861 ~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~ 940 (1578)
++|++.+ . .+++++|.||++||++|+.+.|.++++++.+.+ +.++.||++.+++++++|+|.+ +||+++|++|+
T Consensus 21 ~~~~~~~-~--~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~~~~l~~~~~v~~-~Pt~~~~~~G~ 94 (114)
T 2oe3_A 21 TEFRNLI-K--QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDESPDIAKECEVTA-MPTFVLGKDGQ 94 (114)
T ss_dssp HHHHHHH-H--HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCS-BSEEEEEETTE
T ss_pred HHHHHHH-h--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHCCCCc-ccEEEEEeCCe
Confidence 4455544 3 368999999999999999999999999999875 8999999999999999999998 99999999999
Q ss_pred cccccCCCCCHHHHHHHHHh
Q psy12972 941 TSFFKEPSFSVQKMVEFFRL 960 (1578)
Q Consensus 941 ~~~y~~G~~s~~~L~~fi~~ 960 (1578)
....+.|.. .++|.+++++
T Consensus 95 ~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 95 LIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEEEEESSC-HHHHHHHHHT
T ss_pred EEEEEeCCC-HHHHHHHHHh
Confidence 876666877 8999999864
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=1.8e-12 Score=152.18 Aligned_cols=132 Identities=17% Similarity=0.091 Sum_probs=91.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|++ +|+.||||+....-... ..++.|..
T Consensus 9 ~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~--------------------------------------~~~e~Ei~ 49 (303)
T 3hmm_A 9 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERS--------------------------------------WFREAEIY 49 (303)
T ss_dssp EEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHH--------------------------------------HHHHHHHH
T ss_pred EEEeeCCCeEEEEEEE-CCEEEEEEEECccchhh--------------------------------------HHHHHHHH
Confidence 5799999999999987 69999999986431110 01122332
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCC--C-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHc----
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDK--S-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQT---- 559 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~--~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~---- 559 (1578)
.+.+ +.|..-|.+=.+..+- + ..-+|||||++|.+|.++ +...+++.+...+.+.++. +..+|..
T Consensus 50 ~~~~----l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~--l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~ 123 (303)
T 3hmm_A 50 QTVM----LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDY--LNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 123 (303)
T ss_dssp TSTT----CCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHH--HHHCCBCHHHHHHHHHHHHHHHHHHHCCBCST
T ss_pred HHhc----CCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHH--HHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 2222 2333334333333211 1 134799999999999987 4567788888777777766 6677765
Q ss_pred ----CccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 560 ----GFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 560 ----G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|||+||.|||+. .+++.|||...
T Consensus 124 ~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~ 156 (303)
T 3hmm_A 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp TCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred cCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence 999999999999965 59999999753
|
| >3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.31 E-value=9.6e-13 Score=149.35 Aligned_cols=188 Identities=15% Similarity=0.200 Sum_probs=115.1
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC--Ccceeeeee--cc---cCccccccCCcc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHY--DL---FGTTDGFSGQDS 820 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~--~vg~v~~~~--~~---~~~~~~i~g~~~ 820 (1578)
..++..+|+..+.. ++++|+|+||||||+||+++.|.|+++++.+++. .+.++.+++ +. +|+..++.+.
T Consensus 15 ~~l~~~~f~~~i~~--~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~-- 90 (244)
T 3q6o_A 15 TLLQADTVRGAVLG--SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGF-- 90 (244)
T ss_dssp EEECTTTHHHHHSS--CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSS--
T ss_pred eeCChhhHHHHHhh--CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCcc--
Confidence 45667788888854 5689999999999999999999999999999872 333333332 21 5555555544
Q ss_pred ccccccccccCccccccccccc------cCccCcc---cceeEE-----------------EeeccccccceecccCCCC
Q psy12972 821 ASRNFHNHMYNPFDDVFSEGFN------FPFEEHD---ISLFHK-----------------LSTTHWNFEKNYIPKSYTT 874 (1578)
Q Consensus 821 ~~~~~~~i~~~Ptiklf~~~~~------~~~~~~~---i~~~~v-----------------i~Lt~~nF~~~vl~~s~~~ 874 (1578)
||+.+|..+-. ..+.+.. +..+.. ..++.+++.+.+.. +..+
T Consensus 91 -----------Pt~~~~~~g~~~~~g~~~~~~g~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~-~~~~ 158 (244)
T 3q6o_A 91 -----------PTVRFFXAFTXNGSGAVFPVAGADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFAR-NNEE 158 (244)
T ss_dssp -----------SEEEEECTTCCSSSCEECCCTTCCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHH-CCCS
T ss_pred -----------CEEEEEeCCCcCCCCeeEecCCCCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhc-CCCc
Confidence 88877775321 1122211 110000 01223344443322 3345
Q ss_pred cEEEEEEcCCCcccccccHHHHHHHHHhCCC-ceEEEEEECccchhhHhHcCccccCCcEEEE-cCCccccccCCCCCHH
Q psy12972 875 PHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHVHNEQGLARRLGVGSQLPQIALL-TDGRTSFFKEPSFSVQ 952 (1578)
Q Consensus 875 ~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~-~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf-~~G~~~~y~~G~~s~~ 952 (1578)
+..+.|....| +...+++..+... ++.+..++- .+.+++++|||++ +||+++| ++|+...+....-+.+
T Consensus 159 ~~al~f~~~~~-------~~~~~~~~d~~~~~~i~v~~~~~-~~~~l~~~f~v~~-~Pslvl~~~~g~~~~~~~~~~~r~ 229 (244)
T 3q6o_A 159 YLALIFEXGGS-------YLAREVALDLSQHKGVAVRRVLN-TEANVVRKFGVTD-FPSCYLLFRNGSVSRVPVLMESRS 229 (244)
T ss_dssp EEEEEEECTTC-------CHHHHHHHHTTTCTTEEEEEEET-TCHHHHHHHTCCC-SSEEEEEETTSCEEECCCSSSSHH
T ss_pred eEEEEEEECCc-------chHHHHHHHhccCCceEEEEEeC-chHHHHHHcCCCC-CCeEEEEeCCCCeEeeccccccHH
Confidence 66666776543 2445566666533 378877764 4579999999997 9999887 4666666554444444
Q ss_pred HHHHHHHh
Q psy12972 953 KMVEFFRL 960 (1578)
Q Consensus 953 ~L~~fi~~ 960 (1578)
.+..++++
T Consensus 230 ~~~~~l~~ 237 (244)
T 3q6o_A 230 FYTAYLQR 237 (244)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 55555543
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=3.7e-12 Score=149.14 Aligned_cols=137 Identities=15% Similarity=0.121 Sum_probs=87.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.||+|+||+|+.+ +|+.||||+.+-.-.+. .. -.+.+|+
T Consensus 11 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~------------------------------~~------~~~~~E~ 54 (299)
T 4g31_A 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNREL------------------------------AR------EKVMREV 54 (299)
T ss_dssp EEEEECC--EEEEEEETTTCCEEEEEEEEECSSHH------------------------------HH------HHHHHHH
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHH------------------------------HH------HHHHHHH
Confidence 67999999999999965 89999999875321100 00 1245677
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC-----------ceEEEEeccCCCcCCchhhHhhcC----CCHHHHHHHHHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS-----------TRVLTTEFIDGVKISDKEGLLEKG----FSLADVDRKLFTAF 552 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t-----------~~VLVME~i~G~~l~d~~~l~~~~----~~~~~v~~~l~~~~ 552 (1578)
+.+.++ .|..-|.+=..+.+-.+ .-+|||||++|.+|.++.. ..+ .+...+...+.+++
T Consensus 55 ~il~~l----~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~--~~~~~~~~~~~~~~~i~~qi~ 128 (299)
T 4g31_A 55 KALAKL----EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMN--GRCTIEERERSVCLHIFLQIA 128 (299)
T ss_dssp HHHTTC----CCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHH--TCCSGGGSCHHHHHHHHHHHH
T ss_pred HHHHhC----CCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHH--hcCCCChhHHHHHHHHHHHHH
Confidence 666554 23333443333322111 1269999999999988743 222 22233334444444
Q ss_pred --HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 553 --AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 553 --l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
++.+|..|++|||+||+|||+. .++++|||.+..+
T Consensus 129 ~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~ 168 (299)
T 4g31_A 129 EAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 168 (299)
T ss_dssp HHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC---
T ss_pred HHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceec
Confidence 7889999999999999999964 5999999986543
|
| >1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A | Back alignment and structure |
|---|
Probab=99.29 E-value=1.7e-12 Score=135.03 Aligned_cols=101 Identities=10% Similarity=0.274 Sum_probs=83.1
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
+.++|++.+.. ..+++++|.|||+||++|+.+.|.++++++.+.+. +.++.||++++++++++|+|.+ +||+++|++
T Consensus 10 ~~~~~~~~v~~-~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~~~~~~~~~~i~~-~Pt~~~~~~ 86 (142)
T 1qgv_A 10 NGWQVDQAILS-EEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDITEVPDFNKMYELYD-PCTVMFFFR 86 (142)
T ss_dssp SHHHHHHHHHT-CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETTTCCTTTTSSCSCS-SCEEEEEET
T ss_pred CHHHHHHHHHh-cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-eEEEEEccccCHHHHHHcCCCC-CCEEEEEEC
Confidence 46678776643 13789999999999999999999999999999765 9999999999999999999998 999999999
Q ss_pred Cccccc---------cCCCCC-HHHHHHHHHhhC
Q psy12972 939 GRTSFF---------KEPSFS-VQKMVEFFRLKL 962 (1578)
Q Consensus 939 G~~~~y---------~~G~~s-~~~L~~fi~~~l 962 (1578)
|+.+.. ..|..+ .+++.+++.+.+
T Consensus 87 G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~ 120 (142)
T 1qgv_A 87 NKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120 (142)
T ss_dssp TEEEEEECC------CCSCCSCHHHHHHHHHHHH
T ss_pred CcEEEEecCCCCcceeeeecCcHHHHHHHHHHHH
Confidence 986642 224443 677777776544
|
| >1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1 | Back alignment and structure |
|---|
Probab=99.29 E-value=8.6e-13 Score=132.13 Aligned_cols=98 Identities=17% Similarity=0.264 Sum_probs=80.4
Q ss_pred eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEEC----ccchhhHhHcCccccCCc
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV----HNEQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc----~~~~~L~~k~gV~~~~PT 932 (1578)
.++.++|.+.+ ..+++++|.||++||++|+.+.|.++++++.+... +.++.++. +...+++++|+|.+ +||
T Consensus 16 ~~~~~~~~~~~---~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~i~~-~Pt 90 (118)
T 1zma_A 16 VTTVVRAQEAL---DKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAH-IYFINSEEPSQLNDLQAFRSRYGIPT-VPG 90 (118)
T ss_dssp ECCHHHHHHHH---HTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCC-CEEEETTCGGGHHHHHHHHHHHTCCS-SCE
T ss_pred cCCHHHHHHHH---hCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCe-EEEEECCCcCcHHHHHHHHHHcCCCC-CCe
Confidence 46778888766 34679999999999999999999999999988643 55542222 23358999999998 999
Q ss_pred EEEEcCCccccccCCCCCHHHHHHHHH
Q psy12972 933 IALLTDGRTSFFKEPSFSVQKMVEFFR 959 (1578)
Q Consensus 933 l~lf~~G~~~~y~~G~~s~~~L~~fi~ 959 (1578)
+++|++|+....+.|..+.++|.+|+.
T Consensus 91 ~~~~~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 91 FVHITDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp EEEEETTEEEEECCTTCCHHHHHHHHT
T ss_pred EEEEECCEEEEEecCCCCHHHHHHHhh
Confidence 999999998877789999999999985
|
| >1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 | Back alignment and structure |
|---|
Probab=99.29 E-value=5e-13 Score=132.93 Aligned_cols=66 Identities=32% Similarity=0.479 Sum_probs=61.3
Q ss_pred cCCCcccccccccCCH--HHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 636 SLDPYETLGVPRTASL--QEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~--~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
..|+|++|||+++++. ++||+|||++++++||||+++ .++|++|++||++|+||.+|+.||.+|..
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---~e~f~~I~~AYevL~d~~~R~~~~~~~~~ 74 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGGF 74 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCSCC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---HHHHHHHHHHHHHHCCHHHHHHhhhcccc
Confidence 4689999999999998 999999999999999999876 57999999999999999999999987754
|
| >2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.28 E-value=1e-12 Score=138.77 Aligned_cols=72 Identities=28% Similarity=0.619 Sum_probs=64.5
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCCh-------hHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDP-------TAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-------~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
.+...|+|++|||+++++.++||+|||++++++||||++.. .+.++|++|++||++|+||.+|+.||..+..
T Consensus 6 ~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~ 84 (155)
T 2l6l_A 6 QMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCE 84 (155)
T ss_dssp CCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHH
T ss_pred cCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcch
Confidence 44567999999999999999999999999999999998753 3678999999999999999999999976543
|
| >2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A | Back alignment and structure |
|---|
Probab=99.28 E-value=4.2e-12 Score=143.41 Aligned_cols=100 Identities=16% Similarity=0.142 Sum_probs=87.1
Q ss_pred EEeeccccccceecccCCCCcEEEEEEc--CCCcccccccHHHHHHHHHhCC-CceEEEEEE-----CccchhhHhHcCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYS--DWCFACLQVEPIFKKLMDELSP-LGVGFFTVH-----VHNEQGLARRLGV 926 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~Fya--pwCg~Ck~l~p~~~~lA~~l~~-~~v~~a~VD-----c~~~~~L~~k~gV 926 (1578)
++.+|+.||++.+ ..++++||.||| |||+ +.|.|+++|..+.+ .++.|++|| |+.++++|++|+|
T Consensus 7 v~~Lt~~nF~~~i---~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V 79 (240)
T 2qc7_A 7 ALPLDTVTFYKVI---PKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKL 79 (240)
T ss_dssp CEECCTTHHHHHG---GGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTC
T ss_pred ceECCHHHHHHHH---cCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCC
Confidence 4578999999965 346899999999 9999 99999999999975 249999999 6669999999999
Q ss_pred c--ccCCcEEEEcCCc--cccccCCCCCHHHHHHHHHhhC
Q psy12972 927 G--SQLPQIALLTDGR--TSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 927 ~--~~~PTl~lf~~G~--~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+ + ||||++|++|+ ....+.|.++.+.|.+|+.+..
T Consensus 80 ~~~~-~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 80 DKES-YPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp CGGG-CSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCC-CCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 9 8 99999999998 3445669999999999999874
|
| >1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1 | Back alignment and structure |
|---|
Probab=99.28 E-value=2.4e-12 Score=127.04 Aligned_cols=103 Identities=18% Similarity=0.359 Sum_probs=88.9
Q ss_pred Eee-ccccccceeccc-CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 856 LST-THWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 856 i~L-t~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+.+ +.++|.+.+... ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.+++++++|+|.+ +||+
T Consensus 7 ~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~-~Pt~ 83 (113)
T 1ti3_A 7 IACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDELKAVAEEWNVEA-MPTF 83 (113)
T ss_dssp EEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTCHHHHHHHHCSS-TTEE
T ss_pred eEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccccHHHHHhCCCCc-ccEE
Confidence 344 668888877542 247899999999999999999999999999986 49999999999999999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
++|++|+......| .+.++|.+++.+.+
T Consensus 84 ~~~~~G~~~~~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 84 IFLKDGKLVDKTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp EEEETTEEEEEEEC-CCTTHHHHHHHHHH
T ss_pred EEEeCCEEEEEEec-CCHHHHHHHHHHhh
Confidence 99999998777767 68889999998754
|
| >3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.27 E-value=3.4e-12 Score=131.08 Aligned_cols=104 Identities=13% Similarity=0.255 Sum_probs=87.1
Q ss_pred EEEeecc-ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCc
Q psy12972 854 HKLSTTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 854 ~vi~Lt~-~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PT 932 (1578)
.+++++. ++|.+.+ ....+++++|.||++||++|+.+.|.++++++.+ ++.++.||++.+.+++++|+|.+ +||
T Consensus 21 ~v~~l~~~~~~~~~l-~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~~~~l~~~~~v~~-~Pt 95 (133)
T 3cxg_A 21 IYIELKNTGSLNQVF-SSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDIHPKLNDQHNIKA-LPT 95 (133)
T ss_dssp EEEECCCTTHHHHHH-TC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTTCHHHHHHTTCCS-SSE
T ss_pred cEEEecChhHHHHHH-HhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccchHHHHHhcCCCC-CCE
Confidence 3456765 7777655 3334689999999999999999999999998877 48999999999999999999998 999
Q ss_pred EEEEc--CCc--cccccCCCCCHHHHHHHHHhhCC
Q psy12972 933 IALLT--DGR--TSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 933 l~lf~--~G~--~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+++|+ +|+ ......|. +.++|.+++.+.+.
T Consensus 96 ~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 96 FEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp EEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred EEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 99997 887 56666676 88999999988764
|
| >2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.27 E-value=2.4e-12 Score=132.71 Aligned_cols=100 Identities=12% Similarity=0.069 Sum_probs=85.5
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
..+|.++|.+.+...+.+++++|.|||+||++|+.+.|.|+++++.+. ++.|+.||++.+. ++|+|.+ +||+++
T Consensus 13 ~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~~~~---~~~~i~~-~Pt~~~ 86 (135)
T 2dbc_A 13 REISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVNSCI---EHYHDNC-LPTIFV 86 (135)
T ss_dssp EECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCSSSC---SSCCSSC-CSEEEE
T ss_pred EEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhhcCc---ccCCCCC-CCEEEE
Confidence 457899999988655445799999999999999999999999999985 3899999998874 7899998 999999
Q ss_pred EcCCccccccCCCC-------CHHHHHHHHHhh
Q psy12972 936 LTDGRTSFFKEPSF-------SVQKMVEFFRLK 961 (1578)
Q Consensus 936 f~~G~~~~y~~G~~-------s~~~L~~fi~~~ 961 (1578)
|++|+.+....|.. +.++|..++.+.
T Consensus 87 ~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 87 YKNGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp ESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred EECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 99998776665654 678899999765
|
| >2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C | Back alignment and structure |
|---|
Probab=99.27 E-value=3.9e-13 Score=142.53 Aligned_cols=69 Identities=30% Similarity=0.473 Sum_probs=60.2
Q ss_pred ccccCCCcccccccccCC--HHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 633 CAVSLDPYETLGVPRTAS--LQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as--~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
.....|+|++|||+++|+ .++||+|||++++++|||++++ +++|++|++||++|+||.+|+.||++|..
T Consensus 7 ~~~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~---~e~F~~I~~AYevLsdp~kR~~YD~~G~~ 77 (174)
T 2pf4_E 7 REESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGGF 77 (174)
T ss_dssp HHHHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C---CTTTTHHHHHHHHHHHHHHHHTSCGGGGC
T ss_pred ccccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHhCCHHHHHHHhccCCc
Confidence 344579999999999998 6999999999999999999876 47999999999999999999999999863
|
| >2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A | Back alignment and structure |
|---|
Probab=99.27 E-value=3.5e-12 Score=126.89 Aligned_cols=105 Identities=17% Similarity=0.305 Sum_probs=89.8
Q ss_pred Eee-ccccccceeccc-CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 856 LST-THWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 856 i~L-t~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+.+ +.++|++.+... ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.+++++++|+|.+ +||+
T Consensus 9 ~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~-~Pt~ 85 (118)
T 2vm1_A 9 IACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDELKDVAEAYNVEA-MPTF 85 (118)
T ss_dssp EECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCS-BSEE
T ss_pred EEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcccCHHHHHHcCCCc-CcEE
Confidence 344 568888877542 136899999999999999999999999999986 48999999999999999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
++|++|+....+.| .+.++|.+++.+.+..
T Consensus 86 ~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 86 LFIKDGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp EEEETTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred EEEeCCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 99999998777767 5889999999887643
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.1e-12 Score=153.73 Aligned_cols=137 Identities=17% Similarity=0.096 Sum_probs=92.6
Q ss_pred cccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|+.. +|+.||||+.+...... .+ ...+.
T Consensus 30 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~--~~---------------------------------~~~~~ 74 (304)
T 3ubd_A 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV--RD---------------------------------RVRTK 74 (304)
T ss_dssp EEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE--EE---------------------------------CC---
T ss_pred EEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh--HH---------------------------------HHHHH
Confidence 67999999999999853 57899999986542110 00 00123
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++ .|..-|.+=.++.+ ...-+|||||++|.+|.+... ....++..++...+.+++ ++.+|..|++
T Consensus 75 ~E~~il~~l----~HpnIv~l~~~~~~-~~~~~ivmEy~~gg~L~~~l~-~~~~l~e~~~~~~~~qi~~aL~ylH~~~Ii 148 (304)
T 3ubd_A 75 MERDILVEV----NHPFIVKLHYAFQT-EGKLYLILDFLRGGDLFTRLS-KEVMFTEEDVKFYLAELALALDHLHSLGII 148 (304)
T ss_dssp ---CCCCCC----CCTTEECEEEEEEE-TTEEEEEECCCTTCEEHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHC----CCCCCCeEEEEEEE-CCEEEEEEEcCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 454444332 23333444444432 344579999999999988743 334677777776666666 8899999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|||+||.|||+. .++++|||.+..
T Consensus 149 HRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 149 YRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp CSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred CCCCCHHHeEEcCCCCEEeccccccee
Confidence 999999999964 699999998643
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=1.1e-11 Score=148.47 Aligned_cols=138 Identities=16% Similarity=0.068 Sum_probs=98.0
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+.. +++.||||+.+.+.... ..-+
T Consensus 70 ~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~------------------------------------~~~~ 113 (353)
T 4ase_A 70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS------------------------------------EHRA 113 (353)
T ss_dssp EEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHH------------------------------------HHHH
T ss_pred eEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChH------------------------------------HHHH
Confidence 57999999999999864 35789999987543211 0124
Q ss_pred HHHHHHHHHHHHHhhCCCC-CeeecEEeeCCCCceEEEEeccCCCcCCchhhHh---------------hcCCCHHHHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLP-YVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL---------------EKGFSLADVDR 546 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~-~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~---------------~~~~~~~~v~~ 546 (1578)
|.+|++.+.++. +++ -|.+-.++.+-...-.|||||++|.+|.++..-. ...++...+..
T Consensus 114 ~~~E~~il~~l~----hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 189 (353)
T 4ase_A 114 LMSELKILIHIG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189 (353)
T ss_dssp HHHHHHHHHHHC----CCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHH
T ss_pred HHHHHHHHHHcC----CCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHH
Confidence 577887777764 334 3444444433233457999999999999875321 12356666666
Q ss_pred HHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 547 KLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 547 ~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
.+.++. ++.+|..|+||||+||.|||++ .+++.|||.+..
T Consensus 190 ~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~ 234 (353)
T 4ase_A 190 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 234 (353)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSC
T ss_pred HHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhh
Confidence 666655 7889999999999999999975 599999998743
|
| >1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 | Back alignment and structure |
|---|
Probab=99.25 E-value=1.4e-12 Score=121.62 Aligned_cols=63 Identities=19% Similarity=0.321 Sum_probs=57.0
Q ss_pred cccCCCccccccccc--CCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhcc
Q psy12972 634 AVSLDPYETLGVPRT--ASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYD 699 (1578)
Q Consensus 634 ~~~~d~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD 699 (1578)
....++|++|||+++ +|.++||+|||++++++|||++++ .++|++|++||++|+|+.+|..++
T Consensus 8 ~~~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~---~~~f~~i~~AYe~L~~~~~r~~~~ 72 (79)
T 1faf_A 8 ADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS---HALMQELNSLWGTFKTEVYNLRMN 72 (79)
T ss_dssp HHHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC---HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHHhhHHHHHHHh
Confidence 344689999999999 999999999999999999999865 679999999999999999998743
|
| >3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A | Back alignment and structure |
|---|
Probab=99.25 E-value=2.5e-12 Score=132.47 Aligned_cols=101 Identities=15% Similarity=0.239 Sum_probs=88.3
Q ss_pred ccccccceeccc-CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEc
Q psy12972 859 THWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLT 937 (1578)
Q Consensus 859 t~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~ 937 (1578)
+.++|.+.+... ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.+++++++|+|.+ +||+++|+
T Consensus 31 ~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~~~~~~~~~~~~v~~-~Pt~~~~~ 107 (139)
T 3d22_A 31 TKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP--SLMFLVIDVDELSDFSASWEIKA-TPTFFFLR 107 (139)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCE-ESEEEEEE
T ss_pred CHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCcccHHHHHHcCCCc-ccEEEEEc
Confidence 578898876432 247899999999999999999999999999985 38999999999999999999998 99999999
Q ss_pred CCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 938 DGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 938 ~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+|+....+.|. +.++|.+++.+.++
T Consensus 108 ~G~~~~~~~G~-~~~~l~~~l~~~~~ 132 (139)
T 3d22_A 108 DGQQVDKLVGA-NKPELHKKITAILD 132 (139)
T ss_dssp TTEEEEEEESC-CHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCC-CHHHHHHHHHHHhc
Confidence 99987777687 88999999987763
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.24 E-value=1.5e-11 Score=145.93 Aligned_cols=161 Identities=20% Similarity=0.242 Sum_probs=98.2
Q ss_pred hhHHHHHHHHhCCChhhhccccCC----------cccccccceEEEEEEecC-----CCEEEEEEecchhhhhHHHHHHH
Q psy12972 385 GEVDQLFLEDFGCTHSQLFRSFDE----------NPIAAASLAQVFRAVTKE-----GVEVAVKVQYIDLRERFVGDIAT 449 (1578)
Q Consensus 385 ~~v~~~~~~~lG~~~~~iF~~fd~----------~PlasaSiaQVhrA~l~~-----G~~VAVKVq~P~i~~~~~~Dl~~ 449 (1578)
+.....++..+|.++.+.+..|+. +.||.|++|+||+|+... +..||||+.+++....
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~------- 88 (333)
T 1mqb_A 16 TTENLYFQGAMGSDPNQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEK------- 88 (333)
T ss_dssp ----------------------CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHH-------
T ss_pred CCccccccccccCChhhhhhhccccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHH-------
Confidence 345566777788888888888877 899999999999998752 3469999987653211
Q ss_pred HHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCC
Q psy12972 450 VQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKIS 529 (1578)
Q Consensus 450 l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~ 529 (1578)
.+.+|.+|++.+.++. +...+.+-.++ ......+|||||++|.+|.
T Consensus 89 -----------------------------~~~~~~~E~~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~ 134 (333)
T 1mqb_A 89 -----------------------------QRVDFLGEAGIMGQFS----HHNIIRLEGVI-SKYKPMMIITEYMENGALD 134 (333)
T ss_dssp -----------------------------HHHHHHHHHHHHHTCC----CTTBCCEEEEE-CSSSSEEEEEECCTTEEHH
T ss_pred -----------------------------HHHHHHHHHHHHHhCC----CCCCCcEEEEE-ecCCCcEEEEeCCCCCcHH
Confidence 1124566776666552 22222222222 2335568999999999998
Q ss_pred chhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 530 DKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 530 d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++.......++...+...+.+++ +..+|..|++|+|++|.||++. .++++|||....
T Consensus 135 ~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 135 KFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp HHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 87543345678777777776666 8889999999999999999965 599999998644
|
| >2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis} | Back alignment and structure |
|---|
Probab=99.23 E-value=5.1e-12 Score=126.89 Aligned_cols=100 Identities=18% Similarity=0.224 Sum_probs=85.1
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
+..+|.+.+.+ .+++++|.||++||++|+.+.|.++++++.+ + ++.|+.||++.+++++++|+|.+ +||+++|++
T Consensus 11 ~~~~~~~~~~~--~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~-~v~~~~vd~~~~~~~~~~~~i~~-~Pt~~~~~~ 85 (118)
T 2f51_A 11 THEALLNRIKE--APGLVLVDFFATWCGPCQRLGQILPSIAEAN-K-DVTFIKVDVDKNGNAADAYGVSS-IPALFFVKK 85 (118)
T ss_dssp CHHHHHHHHHH--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T-TSEEEEEETTTCHHHHHHTTCCS-SSEEEEEEE
T ss_pred CHHHHHHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C-CeEEEEEECCCCHHHHHhcCCCC-CCEEEEEeC
Confidence 56778765543 3789999999999999999999999999998 3 49999999999999999999998 999999988
Q ss_pred ----CccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 939 ----GRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 939 ----G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
|+......|..+ ++|.+.+.+..++
T Consensus 86 ~~~~G~~~~~~~G~~~-~~l~~~~~~~~~~ 114 (118)
T 2f51_A 86 EGNEIKTLDQFVGADV-SRIKADIEKFKHH 114 (118)
T ss_dssp ETTEEEEEEEEESCCH-HHHHHHHHHHC--
T ss_pred CCCcceEEEeecCCCH-HHHHHHHHHhhhc
Confidence 887766767654 6799999888765
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=2.1e-11 Score=141.63 Aligned_cols=142 Identities=14% Similarity=0.160 Sum_probs=93.8
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
++||+|++|+||+|+..+|+.||||+.+++.... ..+ ...+ .++ ...|+. .....+.+|++
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~-~~~-~~~~------~~~----~~~w~~-------~~~~~~~~E~~ 156 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSF-KKV-KEKR------DYG----DLHFSV-------LAIRSARNEFR 156 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC-------CC-CC-----------------CHHH-------HHHHHHHHHHH
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCch-hhh-hhhh------hhc----chhhHH-------HHHHHHHHHHH
Confidence 6899999999999999889999999998653211 000 0000 000 111211 12346788888
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHS 568 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHP 568 (1578)
.+.++. . +.+|.++.. +..+|||||++|.+|.++ . .-.+..++..++.+ +..+|..|++|+|+||
T Consensus 157 ~l~~l~------~-~~v~~~~~~--~~~~lvmE~~~g~~L~~l-~----~~~~~~i~~qi~~~-l~~lH~~giiHrDlkp 221 (282)
T 1zar_A 157 ALQKLQ------G-LAVPKVYAW--EGNAVLMELIDAKELYRV-R----VENPDEVLDMILEE-VAKFYHRGIVHGDLSQ 221 (282)
T ss_dssp HHHHTT------T-SSSCCEEEE--ETTEEEEECCCCEEGGGC-C----CSCHHHHHHHHHHH-HHHHHHTTEECSCCST
T ss_pred HHHhcc------C-CCcCeEEec--cceEEEEEecCCCcHHHc-c----hhhHHHHHHHHHHH-HHHHHHCCCEeCCCCH
Confidence 888876 1 567776643 566999999999999883 1 12345566665554 6778999999999999
Q ss_pred CCCCCC--eeEEecCCch
Q psy12972 569 GNDVNT--WLYPVDLGDK 584 (1578)
Q Consensus 569 GNilv~--~v~liDfG~~ 584 (1578)
.|||+. .++++|||..
T Consensus 222 ~NILl~~~~vkl~DFG~a 239 (282)
T 1zar_A 222 YNVLVSEEGIWIIDFPQS 239 (282)
T ss_dssp TSEEEETTEEEECCCTTC
T ss_pred HHEEEECCcEEEEECCCC
Confidence 999953 4666666643
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.8e-11 Score=148.96 Aligned_cols=138 Identities=17% Similarity=0.147 Sum_probs=94.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+...... .+ .-.+.+|+
T Consensus 60 ~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~--~~---------------------------------~~~~~~Ei 104 (398)
T 4b99_A 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVV--TN---------------------------------AKRTLREL 104 (398)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSH--HH---------------------------------HHHHHHHH
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEECccccch--HH---------------------------------HHHHHHHH
Confidence 68999999999999964 89999999985321100 00 01234677
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-----CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-----STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-----t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.+.++. |...|.+-.++.... ..-+|||||++| .|.+... ....++...+...+.+++ +..+|..|
T Consensus 105 ~il~~l~----HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~g-~L~~~i~-~~~~l~~~~~~~~~~qil~al~ylH~~~ 178 (398)
T 4b99_A 105 KILKHFK----HDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIH-SSQPLTLEHVRYFLYQLLRGLKYMHSAQ 178 (398)
T ss_dssp HHHHHCC----CTTBCCEEEECCCSSCTTTCCCEEEEEECCSE-EHHHHHT-SSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhcC----CCCcceEeeeeecccccccCCEEEEEEeCCCC-CHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence 7776653 333455544443211 234799999987 3544422 235677777776666666 88999999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|||+||.|||+. .++++|||....+
T Consensus 179 iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 179 VIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp CBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred CcCCCcCccccccCCCCCEEEeecceeeec
Confidence 99999999999964 6999999987543
|
| >2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6 | Back alignment and structure |
|---|
Probab=99.22 E-value=4.2e-12 Score=141.72 Aligned_cols=103 Identities=16% Similarity=0.161 Sum_probs=88.2
Q ss_pred EEee-ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 855 KLST-THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~L-t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+..+ +.++|.+.+...+.+++++|.||+|||++|+.+.|.|.++|..+. ++.|++||++ ++.+|++|+|.+ +||+
T Consensus 101 v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~-~~~l~~~~~i~~-~PTl 176 (217)
T 2trc_P 101 VYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS-NTGAGDRFSSDV-LPTL 176 (217)
T ss_dssp EEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH-HHTCSTTSCGGG-CSEE
T ss_pred EEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC-cHHHHHHCCCCC-CCEE
Confidence 3456 789999988665556899999999999999999999999999985 3899999999 888999999998 9999
Q ss_pred EEEcCCccccccCCCCCH-------HHHHHHHHhh
Q psy12972 934 ALLTDGRTSFFKEPSFSV-------QKMVEFFRLK 961 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~-------~~L~~fi~~~ 961 (1578)
++|++|+.+..+.|..+. ++|..|+.+.
T Consensus 177 ~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 177 LVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp EEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred EEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 999999877666676653 7888888754
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=2.1e-11 Score=146.47 Aligned_cols=138 Identities=17% Similarity=0.201 Sum_probs=94.9
Q ss_pred hhhhccccCCcccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELK 474 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~ 474 (1578)
+.+.|.-. +.||.|++|+||+|+.+ +|+.||||+..+.-..
T Consensus 19 l~~~Y~i~--~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~--------------------------------- 63 (361)
T 4f9c_A 19 LSNVFKIE--DKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHP--------------------------------- 63 (361)
T ss_dssp GGGTCEEE--EEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCH---------------------------------
T ss_pred ccCcEEEE--EEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCH---------------------------------
Confidence 34555544 57999999999999853 5789999987543110
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--
Q psy12972 475 VPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 475 ~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~-- 552 (1578)
..+.+|.+.+.++. .+..-|.+-.++.+ ...-+|||||++|..|.++. .+++..++...+.+++
T Consensus 64 ------~~~~~E~~~l~~~~---~h~nIv~l~~~~~~-~~~~~lvmE~~~g~~L~~~~----~~l~~~~~~~~~~qll~a 129 (361)
T 4f9c_A 64 ------IRIAAELQCLTVAG---GQDNVMGVKYCFRK-NDHVVIAMPYLEHESFLDIL----NSLSFQEVREYMLNLFKA 129 (361)
T ss_dssp ------HHHHHHHHHHHHTC---SBTTBCCCSEEEEE-TTEEEEEEECCCCCCHHHHH----TTCCHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHhc---CCCCCceEEEEEEE-CCEEEEEEeCCCcccHHHHH----cCCCHHHHHHHHHHHHHH
Confidence 01233444443331 12223444444432 34557999999999988763 3577777766666666
Q ss_pred HHHHHHcCccccCCCCCCCCC----CeeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVN----TWLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv----~~v~liDfG~~~ 585 (1578)
++.+|..|++|||+||+|||+ +.++++|||.+.
T Consensus 130 l~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~ 166 (361)
T 4f9c_A 130 LKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166 (361)
T ss_dssp HHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred HHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence 889999999999999999996 468899999763
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.1e-12 Score=158.40 Aligned_cols=209 Identities=11% Similarity=0.078 Sum_probs=113.1
Q ss_pred HhcCCCCCChhHHHHHHHHh-hhcCCCChHHHHHHHhhhhcCcccccccccCCCchhHHHHHHHHHhhhhhhhhhhHHHH
Q psy12972 312 MVSLDHVLPRQYPHTLRALQ-DKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQALQDKCLLREKGEVDQL 390 (1578)
Q Consensus 312 lstr~dllP~~~~~~L~~Lq-d~~p~~~~~~~~~~~~~~~g~~~~~~~~~f~~~p~~~~~~~~~l~~~~~~~~~~~v~~~ 390 (1578)
-|++.+++++++.+.+..++ +.+++.+..++...+...+- .....+ .
T Consensus 16 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------------------------------~ 63 (377)
T 3byv_A 16 FQGPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLW-NTGQPF-------------------------------R 63 (377)
T ss_dssp -CCTTHHHHHHHHHHCGGGCCCSTTC-CHHHHHHHHHHHTC-C-CCEE-------------------------------E
T ss_pred CCCCchHHHHHHHHhCcccccccccccccchhhhhhHHHhc-CCCCcE-------------------------------E
Confidence 46888899999999999998 88877776666555433220 000000 0
Q ss_pred HHHHhCCChhhhccccCCcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHH
Q psy12972 391 FLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWV 469 (1578)
Q Consensus 391 ~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~ 469 (1578)
+..+++.+ .+-|.- .++||+|++|+||+|+. .+|+.||||+.+...... ..+...+...+.++..+ ..++.
T Consensus 64 ~~~~~~~~-~~~y~~--~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~~l~h--- 135 (377)
T 3byv_A 64 VESELGER-PRTLVR--GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP-SNAIKQMKEEVLRLRLL-RGIKN--- 135 (377)
T ss_dssp EEESSSCC-CEEEEE--EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CC-TTHHHHHHHHHHGGGGS-TTCCS---
T ss_pred EEeecCCC-CceEEE--cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccc-hHHHHHHHHHHHHHHhc-cccCC---
Confidence 00011110 111111 37899999999999996 579999999986432110 00111111111111111 11111
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCC----------------CceEEEEeccCCCcCCchhh
Q psy12972 470 INELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKS----------------STRVLTTEFIDGVKISDKEG 533 (1578)
Q Consensus 470 ~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~----------------t~~VLVME~i~G~~l~d~~~ 533 (1578)
.|+.++...+.... .++.+-. ...+|||||++ .+|.++..
T Consensus 136 ------------------pniv~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~-g~L~~~l~ 191 (377)
T 3byv_A 136 ------------------QKQAKVHLRFIFPF-----DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQ-SNLQTFGE 191 (377)
T ss_dssp ------------------HHHHHHHHCBCCCS-----EEEECTTSCSEEEC------CEEESEEEEEECCS-EEHHHHHH
T ss_pred ------------------HHHHHHHhhhhhhh-----hhhhccCCccccccccCCCceEEEEEEEEEeccC-CCHHHHHH
Confidence 22333321111000 1111000 02569999995 48877643
Q ss_pred HhhcCCCH-------HHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 534 LLEKGFSL-------ADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 534 l~~~~~~~-------~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
-. ..++. ..+...+.+++ +..+|..|++|+|+||+|||+. .++++|||...
T Consensus 192 ~~-~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~ 254 (377)
T 3byv_A 192 VL-LSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLV 254 (377)
T ss_dssp HH-HHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCE
T ss_pred hc-cccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhhe
Confidence 21 11222 33333444444 7889999999999999999975 69999999764
|
| >1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 | Back alignment and structure |
|---|
Probab=99.20 E-value=2.8e-12 Score=121.64 Aligned_cols=60 Identities=27% Similarity=0.349 Sum_probs=55.2
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC--hhHHHHHHHHHHHHHHcCCHHHH
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--PTAQEKFLQLTEAYNILSDAERR 695 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R 695 (1578)
..++|++|||++++|.+|||+|||+++++||||+++. +.++++|++|++||++|+|...|
T Consensus 15 ~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 4688999999999999999999999999999999986 45889999999999999998666
|
| >1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1 | Back alignment and structure |
|---|
Probab=99.18 E-value=3.1e-11 Score=112.74 Aligned_cols=83 Identities=19% Similarity=0.308 Sum_probs=74.0
Q ss_pred CcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHH
Q psy12972 874 TPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQK 953 (1578)
Q Consensus 874 ~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~ 953 (1578)
.+.+|.||++||++|+++.|.++++++.+.+. +.+..||++++++++++|||.+ +||+++ +|+. .+.|..+.++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~-~Pt~~~--~G~~--~~~G~~~~~~ 76 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDA-VEVEYINVMENPQKAMEYGIMA-VPTIVI--NGDV--EFIGAPTKEA 76 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSS-EEEEEEESSSSCCTTTSTTTCC-SSEEEE--TTEE--ECCSSSSSHH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCc-eEEEEEECCCCHHHHHHCCCcc-cCEEEE--CCEE--eeecCCCHHH
Confidence 46799999999999999999999999998754 9999999999999999999998 999998 8876 4458788999
Q ss_pred HHHHHHhhC
Q psy12972 954 MVEFFRLKL 962 (1578)
Q Consensus 954 L~~fi~~~l 962 (1578)
|.+++.+.+
T Consensus 77 l~~~l~~~l 85 (85)
T 1fo5_A 77 LVEAIKKRL 85 (85)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998653
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.18 E-value=3.5e-11 Score=145.24 Aligned_cols=146 Identities=15% Similarity=0.154 Sum_probs=96.3
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+...|.....+.||.|++|+||+|+.. +|+.||||+.++.-..
T Consensus 85 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~------------------------------------ 128 (373)
T 2x4f_A 85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMK------------------------------------ 128 (373)
T ss_dssp GGGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHH------------------------------------
T ss_pred cccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccc------------------------------------
Confidence 344555555678999999999999964 7999999998753211
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
..-.+.+|++.+.++. +...+.+-..+ ......+|||||++|.+|.+...-....++...+...+.+++ +..
T Consensus 129 -~~~~~~~E~~~l~~l~----hpnIv~~~~~~-~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~ 202 (373)
T 2x4f_A 129 -DKEEVKNEISVMNQLD----HANLIQLYDAF-ESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRH 202 (373)
T ss_dssp -HHHHHHHHHHHHTTCC----CTTBCCEEEEE-ECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHH
T ss_pred -cHHHHHHHHHHHHhCC----CCCCCeEEEEE-EECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 0112456666665542 22222222222 234556899999999999876443334577776666655655 788
Q ss_pred HHHcCccccCCCCCCCCC-----CeeEEecCCchhh
Q psy12972 556 IFQTGFVHADPHSGNDVN-----TWLYPVDLGDKFR 586 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv-----~~v~liDfG~~~~ 586 (1578)
+|..|++|+|+||+|||+ +.++++|||....
T Consensus 203 LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~ 238 (373)
T 2x4f_A 203 MHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARR 238 (373)
T ss_dssp HHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEE
T ss_pred HHHCCcccccCCHHHEEEecCCCCcEEEEeCCCcee
Confidence 999999999999999996 2599999997643
|
| >2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.17 E-value=7.2e-12 Score=127.26 Aligned_cols=106 Identities=10% Similarity=0.255 Sum_probs=88.0
Q ss_pred eeccccccceeccc-CCCCcEEEEEEcCCCcccccccHHH---HHHHHHhCCCceEEEEEECc--cchhhHhHcCccccC
Q psy12972 857 STTHWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVH--NEQGLARRLGVGSQL 930 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~---~~lA~~l~~~~v~~a~VDc~--~~~~L~~k~gV~~~~ 930 (1578)
.++..+|.+.+... ..+++++|.||++||++|+.+.|.+ +++++.+... +.++.||++ .+..+|++|+|.+ +
T Consensus 10 ~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~~~v~~-~ 87 (130)
T 2kuc_A 10 AFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRH-FVNLKMDMEKGEGVELRKKYGVHA-Y 87 (130)
T ss_dssp CCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHH-SEEEEECSSSTTHHHHHHHTTCCS-S
T ss_pred CcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcC-eEEEEEecCCcchHHHHHHcCCCC-C
Confidence 35677887766322 2468999999999999999999999 7777766543 889999998 5779999999998 9
Q ss_pred CcEEEE-cCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 931 PQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 931 PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
||+++| ++|+....+.|..+.++|.+++++.+.+
T Consensus 88 Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 88 PTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp CEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 999999 7898877677989999999999987754
|
| >3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=9.6e-12 Score=152.08 Aligned_cols=107 Identities=20% Similarity=0.250 Sum_probs=91.2
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC-------ceEEEEEECccchhhHhHcCcc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-------GVGFFTVHVHNEQGLARRLGVG 927 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~-------~v~~a~VDc~~~~~L~~k~gV~ 927 (1578)
++.+|.++|++.+.. +..++++|.|||+||++|+.+.|.|+++++.+... .+.|++|||+.++++|++|+|.
T Consensus 25 V~~Lt~~~F~~~l~~-~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~V~ 103 (470)
T 3qcp_A 25 VVDLSGDDFSRVHRV-APLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDIN 103 (470)
T ss_dssp EEECSCSCGGGTCTT-GGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTTCC
T ss_pred cEECCHHHHHHHHHh-CCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcCCC
Confidence 567899999987743 33579999999999999999999999999999732 2999999999999999999999
Q ss_pred ccCCcEEEEcCCc--cccccCCCCCHHHHHHHHHhhCCC
Q psy12972 928 SQLPQIALLTDGR--TSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 928 ~~~PTl~lf~~G~--~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+ +||+++|.+|. ....+.|.++.+.| .|+.+++..
T Consensus 104 ~-~PTlilf~~gg~~~~~~y~G~r~~e~L-~fI~k~l~~ 140 (470)
T 3qcp_A 104 F-VPRLFFFYPRDSCRSNEECGTSSLEHV-AFENSHLEV 140 (470)
T ss_dssp S-SCEEEEEEESSCCCTTSCCCCCCEEEE-ECSCTTCCH
T ss_pred c-cCeEEEEECCCceEEEEeeCCCCHHHH-HHHHHhcCH
Confidence 8 99999997554 34556699999999 999887754
|
| >1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C | Back alignment and structure |
|---|
Probab=99.16 E-value=1.5e-11 Score=139.31 Aligned_cols=103 Identities=17% Similarity=0.180 Sum_probs=86.1
Q ss_pred EEee-ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 855 KLST-THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~L-t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+..+ +.++|.+.+...+.+++++|.||||||++|+.+.|.|.++|..+.+ +.|++||++. ..++.+|+|.+ +||+
T Consensus 114 V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~--v~f~kVd~d~-~~l~~~~~I~~-~PTl 189 (245)
T 1a0r_P 114 VYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM--VKFCKIKASN-TGAGDRFSSDV-LPTL 189 (245)
T ss_dssp EEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT--SEEEEEEHHH-HCCTTSSCTTT-CSEE
T ss_pred EEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--CEEEEEeCCc-HHHHHHCCCCC-CCEE
Confidence 3456 6889999886555578999999999999999999999999999864 8999999987 78999999998 9999
Q ss_pred EEEcCCccccccCCC-------CCHHHHHHHHHhh
Q psy12972 934 ALLTDGRTSFFKEPS-------FSVQKMVEFFRLK 961 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~-------~s~~~L~~fi~~~ 961 (1578)
++|++|+.+....|. ++.+.|..|+.+.
T Consensus 190 l~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 190 LVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp EEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred EEEECCEEEEEEeCCcccccccccHHHHHHHHHHc
Confidence 999999865443332 4567888888765
|
| >1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa} | Back alignment and structure |
|---|
Probab=99.16 E-value=6.9e-12 Score=127.15 Aligned_cols=102 Identities=17% Similarity=0.318 Sum_probs=88.6
Q ss_pred ccccccceeccc-CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEc
Q psy12972 859 THWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLT 937 (1578)
Q Consensus 859 t~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~ 937 (1578)
+.++|.+.+... ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.+.+++++|+|.+ +||+++|+
T Consensus 21 ~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~-~Pt~~~~~ 97 (130)
T 1wmj_A 21 NKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDELKEVAEKYNVEA-MPTFLFIK 97 (130)
T ss_dssp SSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTTSGGGHHHHTCCS-SCCCCBCT
T ss_pred CHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccchHHHHHHcCCCc-cceEEEEe
Confidence 457788776542 247899999999999999999999999999986 48999999999999999999998 99999999
Q ss_pred CCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 938 DGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 938 ~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+|+....+.| .+.++|.+++.+.+..
T Consensus 98 ~g~~~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 98 DGAEADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp TTTCCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred CCeEEEEEeC-CCHHHHHHHHHHHHhc
Confidence 9998777777 5889999999887743
|
| >2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.7e-10 Score=131.10 Aligned_cols=185 Identities=11% Similarity=0.121 Sum_probs=122.4
Q ss_pred CCCcEEEEEEcCC--CcccccccHHHHHHHHHh---CCCc-eEEEEEECccchhhHhHcCccccCCcEEEEcCCcccccc
Q psy12972 872 YTTPHLILFYSDW--CFACLQVEPIFKKLMDEL---SPLG-VGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFK 945 (1578)
Q Consensus 872 ~~~~~LV~Fyapw--Cg~Ck~l~p~~~~lA~~l---~~~~-v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~ 945 (1578)
-.++++|.||++| |++|+.+.|.++++|+.. ++.. |.|+++|+++++++|++|||++ +||+++| +| ...|
T Consensus 24 ~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~-~Pt~~i~-~g-~~~~- 99 (243)
T 2hls_A 24 MVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVER-VPTVAFL-GG-EVRW- 99 (243)
T ss_dssp CCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCS-SSEEEET-TT-TEEE-
T ss_pred CCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCc-CCEEEEE-CC-ceeE-
Confidence 3689999999999 999999999999999884 3322 8999999999999999999997 9999999 66 4444
Q ss_pred CCCCCHHHHHHHHHhhCCCc-cccccccccHHHHhhcccCCCcEEEE-Ee---ccCCchHHHHHHH-Hhhc----CCCeE
Q psy12972 946 EPSFSVQKMVEFFRLKLPYK-LIVPLSATNVDAFLDNWREDNKVHAL-LF---QRSLPVRLRYLIN-AFKH----RTTIV 1015 (1578)
Q Consensus 946 ~G~~s~~~L~~fi~~~lp~~-vv~~it~~~~~~fl~~~~~~~~~~Vl-fF---~~~~~~~~~~~~~-a~~~----~~~v~ 1015 (1578)
.|..+.+.+.+|+...+... ....++++..+.+.+.. +.+.++ |+ |.........+.. +..+ ...+.
T Consensus 100 ~G~~~~~~l~~fv~~~l~~~~~~~~l~~~~~~~~~~~~---~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~ 176 (243)
T 2hls_A 100 TGIPAGEEIRALVEVIMRLSEDESGLEDATKEALKSLK---GRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVIL 176 (243)
T ss_dssp ESCCCTTHHHHHHHHHHHHHTTCCCCCHHHHHHHHHCC---SCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred cCCCcHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHcC---CCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEE
Confidence 47778788999887643100 01223444444443322 344444 44 2222222222211 2222 15688
Q ss_pred EEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhhcC
Q psy12972 1016 FGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 1073 (1578)
Q Consensus 1016 Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~n 1073 (1578)
|..+++ ..+.+++++|+|.+ .||+++ ++. . ...+..+...+..++...
T Consensus 177 ~~~vd~--~~~~~~~~~~~V~~-vPt~~i--~G~--~---~~~G~~~~~~l~~~l~~~ 224 (243)
T 2hls_A 177 SEAVEA--YENPDIADKYGVMS-VPSIAI--NGY--L---VFVGVPYEEDFLDYVKSA 224 (243)
T ss_dssp EEEEET--TTCHHHHHHTTCCS-SSEEEE--TTE--E---EEESCCCHHHHHHHHHHH
T ss_pred EEEEEC--ccCHHHHHHcCCee-eCeEEE--CCE--E---EEeCCCCHHHHHHHHHHH
Confidence 877754 46788999999986 578877 221 1 134555666777777654
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.15 E-value=4.5e-11 Score=143.38 Aligned_cols=137 Identities=20% Similarity=0.153 Sum_probs=94.7
Q ss_pred cccccccceEEEEEE------ecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAV------TKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~------l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+ ..+|+.||||+.++.....
T Consensus 71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------------------------- 110 (365)
T 3e7e_A 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWE---------------------------------------- 110 (365)
T ss_dssp EEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHH----------------------------------------
T ss_pred EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhH----------------------------------------
Confidence 469999999999994 4579999999987653221
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH----hhcCCCHHHHHHHHHHHH--HHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL----LEKGFSLADVDRKLFTAF--AEQI 556 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l----~~~~~~~~~v~~~l~~~~--l~~i 556 (1578)
+..|.+.+++++.. .+...+.+-..+ ......+|||||++|.+|.++... ....++...+...+.+++ ++.+
T Consensus 111 ~~~e~~~~~~l~~~-~~~~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~l 188 (365)
T 3e7e_A 111 FYIGTQLMERLKPS-MQHMFMKFYSAH-LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQV 188 (365)
T ss_dssp HHHHHHHHHHSCGG-GGGGBCCEEEEE-ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhh-hhhhhhhhheee-ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH
Confidence 23344444444321 111112222222 234567899999999999987543 234577777777776666 8899
Q ss_pred HHcCccccCCCCCCCCCC--------------eeEEecCCchhhh
Q psy12972 557 FQTGFVHADPHSGNDVNT--------------WLYPVDLGDKFRL 587 (1578)
Q Consensus 557 ~~~G~vH~DpHPGNilv~--------------~v~liDfG~~~~l 587 (1578)
|..|++|+|+||.|||+. .++++|||....+
T Consensus 189 H~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~ 233 (365)
T 3e7e_A 189 HDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDM 233 (365)
T ss_dssp HTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEG
T ss_pred hhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhh
Confidence 999999999999999973 4999999987443
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.15 E-value=5.2e-11 Score=139.26 Aligned_cols=147 Identities=18% Similarity=0.238 Sum_probs=94.5
Q ss_pred HHhCCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHH
Q psy12972 393 EDFGCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVIN 471 (1578)
Q Consensus 393 ~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~ 471 (1578)
..++....+.|... +.||.|++|.||+|+.. +|+.||||+....-. ..
T Consensus 21 ~~~~~~~~~~y~~~--~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-------------------------~~---- 69 (314)
T 3com_A 21 DSLTKQPEEVFDVL--EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-------------------------LQ---- 69 (314)
T ss_dssp ---------CEEEE--EECC----CEEEEEEETTTCCEEEEEEEETTSC-------------------------CH----
T ss_pred hhhhhcchhhhhhh--eeeccCCCeEEEEEEECCCCCEEEEEecCchHH-------------------------HH----
Confidence 44555556666655 67999999999999976 699999998864210 00
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHH
Q psy12972 472 ELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTA 551 (1578)
Q Consensus 472 e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~ 551 (1578)
++.+|++.+.++ .+...+.+-..+. .....+|||||++|.+|.++.......++...+...+.++
T Consensus 70 ----------~~~~e~~~l~~l----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i 134 (314)
T 3com_A 70 ----------EIIKEISIMQQC----DSPHVVKYYGSYF-KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQST 134 (314)
T ss_dssp ----------HHHHHHHHHHTC----CCTTBCCEEEEEE-ETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHhC----CCCCCccEEEEEE-eCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 134455555443 2222222223322 2345689999999999998865455667877777766666
Q ss_pred H--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 552 F--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 552 ~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+ +..+|..|++|+|++|.||++. .++++|||...
T Consensus 135 ~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 173 (314)
T 3com_A 135 LKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAG 173 (314)
T ss_dssp HHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred HHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccch
Confidence 5 7889999999999999999964 59999999764
|
| >1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 | Back alignment and structure |
|---|
Probab=99.15 E-value=1e-11 Score=132.77 Aligned_cols=67 Identities=22% Similarity=0.369 Sum_probs=60.4
Q ss_pred CCCcccccccccC--CHHHHHHHhhhhhhhcCCCCCCCh------hHHHHHHHHHHHHHHcCCHHHHHhccccCC
Q psy12972 637 LDPYETLGVPRTA--SLQEIRKNYKRLVVEWHPDKNNDP------TAQEKFLQLTEAYNILSDAERRKQYDLFGT 703 (1578)
Q Consensus 637 ~d~y~iLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~~------~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~ 703 (1578)
+|||++|||++++ |..+||++||+++++||||++++. .+.++|++|++||++|+||.+|+.||....
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 4799999999998 999999999999999999998753 245799999999999999999999998644
|
| >1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1 | Back alignment and structure |
|---|
Probab=99.15 E-value=4.4e-11 Score=111.73 Aligned_cols=82 Identities=16% Similarity=0.215 Sum_probs=73.2
Q ss_pred cEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHH
Q psy12972 875 PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKM 954 (1578)
Q Consensus 875 ~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L 954 (1578)
..+|.||++||++|+++.|.++++++.+.+. +.+..||++++++++++|||.+ +||+++ +|+. .+.|..+.++|
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~-~Pt~~~--~G~~--~~~G~~~~~~l 76 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDK-IDVEKIDIMVDREKAIEYGLMA-VPAIAI--NGVV--RFVGAPSREEL 76 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSS-CCEEEECTTTCGGGGGGTCSSC-SSEEEE--TTTE--EEECSSCCHHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCC-eEEEEEECCCCHHHHHhCCcee-eCEEEE--CCEE--EEccCCCHHHH
Confidence 3589999999999999999999999999864 9999999999999999999998 999998 8876 34487888999
Q ss_pred HHHHHhhC
Q psy12972 955 VEFFRLKL 962 (1578)
Q Consensus 955 ~~fi~~~l 962 (1578)
.+++.+.+
T Consensus 77 ~~~l~~~l 84 (85)
T 1nho_A 77 FEAINDEM 84 (85)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99998764
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.14 E-value=6.8e-11 Score=138.86 Aligned_cols=71 Identities=13% Similarity=0.013 Sum_probs=51.1
Q ss_pred eEEEEeccCCCcCCchhhHhh--cCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 516 RVLTTEFIDGVKISDKEGLLE--KGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 516 ~VLVME~i~G~~l~d~~~l~~--~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
.+|||||++|.+|.++..... ...+...+...+.+++ +..+|..|++|+|+||+|||+. .++++|||....
T Consensus 136 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 213 (332)
T 3qd2_B 136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTA 213 (332)
T ss_dssp EEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccc
Confidence 579999999999988743211 1122223344444444 7889999999999999999965 599999997643
|
| >2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A | Back alignment and structure |
|---|
Probab=99.14 E-value=3e-11 Score=124.03 Aligned_cols=102 Identities=20% Similarity=0.371 Sum_probs=83.9
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHH---HHHHHHhCCCceEEEEEEC----ccchhhHhHcCccccCC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHV----HNEQGLARRLGVGSQLP 931 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~---~~lA~~l~~~~v~~a~VDc----~~~~~L~~k~gV~~~~P 931 (1578)
+.++|...+.+. .+++++|.||++||++|+.+.|.+ .++++.+++ +.++.||+ +.+.+++++|+|.+ +|
T Consensus 18 ~~~~~~~~l~~~-~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~--~~~~~vd~~~~~~~~~~l~~~~~v~~-~P 93 (134)
T 2fwh_A 18 TVDELNQALVEA-KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD--TVLLQANVTANDAQDVALLKHLNVLG-LP 93 (134)
T ss_dssp SHHHHHHHHHHH-TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT--SEEEEEECTTCCHHHHHHHHHTTCCS-SS
T ss_pred CHHHHHHHHHHh-cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--cEEEEEeCCCCcchHHHHHHHcCCCC-CC
Confidence 445566555332 378999999999999999999999 999998874 89999999 56779999999998 99
Q ss_pred cEEEE-cCCccc--cccCCCCCHHHHHHHHHhhCCC
Q psy12972 932 QIALL-TDGRTS--FFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 932 Tl~lf-~~G~~~--~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
|+++| ++|+.+ ..+.|..+.++|.+++.+.-|.
T Consensus 94 t~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~~~ 129 (134)
T 2fwh_A 94 TILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQPH 129 (134)
T ss_dssp EEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC---
T ss_pred EEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcCcc
Confidence 99999 889886 5667999999999999876543
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=99.14 E-value=1.3e-10 Score=137.33 Aligned_cols=133 Identities=19% Similarity=0.256 Sum_probs=95.1
Q ss_pred CCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 407 DENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 407 d~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
..++||.|++|.||+|+.+ +|+.||||+....... ++.+
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----------------------------------------~~~~ 54 (325)
T 3kn6_A 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEA----------------------------------------NTQK 54 (325)
T ss_dssp TSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHH----------------------------------------HHHH
T ss_pred CCCccccCCCeEEEEEEECCCCCEEEEEEEChhhhh----------------------------------------hHHH
Confidence 4579999999999999975 7999999998653221 1233
Q ss_pred HHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 486 EGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
|.+.+.++. +++. +.+-.++. .....+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++
T Consensus 55 e~~~l~~l~----~h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~iv 128 (325)
T 3kn6_A 55 EITALKLCE----GHPNIVKLHEVFH-DQLHTFLVMELLNGGELFERIK-KKKHFSETEASYIMRKLVSAVSHMHDVGVV 128 (325)
T ss_dssp HHHHHHHTT----TCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHH-HCSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhc----CCCCeeEEEEEEE-cCCEEEEEEEccCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 444444432 2333 33333332 2345689999999999988643 234577777766666665 7889999999
Q ss_pred ccCCCCCCCCCC------eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~------~v~liDfG~~~ 585 (1578)
|+|++|.|||+. .++++|||...
T Consensus 129 H~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 157 (325)
T 3kn6_A 129 HRDLKPENLLFTDENDNLEIKIIDFGFAR 157 (325)
T ss_dssp CCCCCGGGEEEEC----CEEEECCCTTCE
T ss_pred ecCCCHHHEEEecCCCcccEEEeccccce
Confidence 999999999973 58999999763
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.14 E-value=8.1e-11 Score=139.40 Aligned_cols=71 Identities=21% Similarity=0.067 Sum_probs=54.8
Q ss_pred CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHH-HcCccccCCCCCCCCCC---------------
Q psy12972 513 SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIF-QTGFVHADPHSGNDVNT--------------- 574 (1578)
Q Consensus 513 ~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~-~~G~vH~DpHPGNilv~--------------- 574 (1578)
...-+|||||++|.++.+. +....++...+...+.+++ +..+| ..|++|||+||+|||+.
T Consensus 134 ~~~~~lv~E~~~~g~ll~~--~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~ 211 (336)
T 2vuw_A 134 DDQLFIVLEFEFGGIDLEQ--MRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKS 211 (336)
T ss_dssp TTCEEEEEEEECCCEETGG--GTTTCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEE
T ss_pred cCeEEEEEEecCCCccHHH--HHhcCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCcc
Confidence 3456899999998865443 2345677777777666666 78899 99999999999999953
Q ss_pred --------eeEEecCCchh
Q psy12972 575 --------WLYPVDLGDKF 585 (1578)
Q Consensus 575 --------~v~liDfG~~~ 585 (1578)
.++++|||...
T Consensus 212 ~~~~~~~~~vkL~DFG~a~ 230 (336)
T 2vuw_A 212 STIPSCGLQVSIIDYTLSR 230 (336)
T ss_dssp EEEECTTEEEEECCCTTCB
T ss_pred ccccCCCceEEEeeccccE
Confidence 68899999764
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=8.8e-11 Score=134.24 Aligned_cols=134 Identities=16% Similarity=0.095 Sum_probs=97.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+++.||||+.+...... -++.+|++
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 57 (269)
T 4hcu_A 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--------------------------------------EDFIEEAE 57 (269)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEEECTTSBCH--------------------------------------HHHHHHHH
T ss_pred heecCCCccEEEEEEecCCCeEEEEEecccccCH--------------------------------------HHHHHHHH
Confidence 6799999999999999899999999987543210 12456666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.+++ +..-+.+-.++ ......+|||||++|.+|.++..-....++...+...+.+++ +..+|..|++|+|+
T Consensus 58 ~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~di 132 (269)
T 4hcu_A 58 VMMKLS----HPKLVQLYGVC-LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 132 (269)
T ss_dssp HHHTCC----CTTBCCEEEEE-CSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred HHHhCC----CCCEeeEEEEE-ecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCc
Confidence 666653 22222222222 223456899999999999887543334477777766666655 88899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|.||++. .++++|||...
T Consensus 133 kp~Nil~~~~~~~kl~Dfg~~~ 154 (269)
T 4hcu_A 133 AARNCLVGENQVIKVSDFGMTR 154 (269)
T ss_dssp CGGGEEECGGGCEEECCTTGGG
T ss_pred chheEEEcCCCCEEeccccccc
Confidence 99999975 59999999764
|
| >1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J | Back alignment and structure |
|---|
Probab=99.14 E-value=1.2e-11 Score=131.84 Aligned_cols=62 Identities=21% Similarity=0.490 Sum_probs=57.9
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChh----HHHHHHHHHHHHHHcCCHHHHHhc
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPT----AQEKFLQLTEAYNILSDAERRKQY 698 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~----a~~~f~~i~~Ay~~L~d~~~R~~y 698 (1578)
.|+|++|||++.++.++||+|||+++++|||||++... ++++|++|++||++|+|+.+|+.|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 59999999999999999999999999999999987533 789999999999999999999877
|
| >4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A | Back alignment and structure |
|---|
Probab=99.14 E-value=2.1e-10 Score=128.84 Aligned_cols=196 Identities=17% Similarity=0.255 Sum_probs=139.8
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
|.+++++.+ +.+++++|.||++| |..+.+.|.++|+.+. .+.|+. +.++++|++++|++ |+|++|++
T Consensus 16 s~~~~~~~l---~~~~v~vVgff~~~---~~~~~~~f~~~A~~l~--~~~F~~---t~~~~v~~~~~v~~--p~i~lfk~ 82 (227)
T 4f9z_D 16 DVPAAMEFI---AATEVAVIGFFQDL---EIPAVPILHSMVQKFP--GVSFGI---STDSEVLTHYNITG--NTICLFRL 82 (227)
T ss_dssp SHHHHHHHH---HTSSEEEEEECSCS---CSTHHHHHHHHTTTCT--TSEEEE---ECCHHHHHHTTCCS--SEEEEEET
T ss_pred CHHHHHHHH---hcCCeEEEEEecCC---CchhHHHHHHHHHhCC--CceEEE---ECCHHHHHHcCCCC--CeEEEEEe
Confidence 557888765 44789999999998 5678899999999994 488886 45789999999975 99999987
Q ss_pred Cc-c-ccccC---CCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEeccCC-c--hH--HHHHHHHh
Q psy12972 939 GR-T-SFFKE---PSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSL-P--VR--LRYLINAF 1008 (1578)
Q Consensus 939 G~-~-~~y~~---G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~-~--~~--~~~~~~a~ 1008 (1578)
+. . ..|.. |.++.++|.+||+.+..| ++..+|.+++..+.+.. ...++++|.+.. . .. -.+...|.
T Consensus 83 ~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~p-lv~e~t~~n~~~~~~~~---~~~~~l~f~~~~~~~~~~~~~~~~~vAk 158 (227)
T 4f9z_D 83 VDNEQLNLEDEDIESIDATKLSRFIEINSLH-MVTEYNPVTVIGLFNSV---IQIHLLLIMNKASPEYEENMHRYQKAAK 158 (227)
T ss_dssp TTTEEEEECHHHHHTCCHHHHHHHHHHHCCC-SEEECCHHHHHHHHHSS---CCEEEEEEECTTSTTHHHHHHHHHHHHH
T ss_pred cCcccccccccccCCCCHHHHHHHHHHhCCC-ceeecCcccHHHHhccC---CceEEEEEEcCCcchHHHHHHHHHHHHH
Confidence 43 2 33332 479999999999888755 57788999998888663 344555563322 1 11 22223344
Q ss_pred hcCCCeEEEEEEcccCCChhHHhhcCCCC-CCcEEEEeccCCCCCccccccCCCCchhhhhhhhc
Q psy12972 1009 KHRTTIVFGVIVYDQEDSSSVFQRFKVPG-DKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDN 1072 (1578)
Q Consensus 1009 ~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~-~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~ 1072 (1578)
.++.++.|++++.+......+++.||+.. ..|++++++...... .....++++...|.+|++.
T Consensus 159 ~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~k-y~~~~~~~t~~~i~~Fv~~ 222 (227)
T 4f9z_D 159 LFQGKILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEW-DTLPTAEVSVEHVQNFCDG 222 (227)
T ss_dssp HTTTTCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCE-EEETTCCCCHHHHHHHHHH
T ss_pred HhhCCEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCcc-ccCCcCCCCHHHHHHHHHH
Confidence 78888999999776555667889999973 578999996432211 1122356777888888764
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=1.1e-10 Score=133.28 Aligned_cols=134 Identities=17% Similarity=0.139 Sum_probs=98.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+.++++.||||+.+++.... -++.+|++
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 55 (268)
T 3sxs_A 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE--------------------------------------DEFFQEAQ 55 (268)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECBTTBCH--------------------------------------HHHHHHHH
T ss_pred eeeccCCCceEEEEEecCceeEEEEEeccCCCcH--------------------------------------HHHHHHHH
Confidence 6799999999999999999999999987542210 12456666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++. +..-+.+-.++ ......+|||||++|.+|.++.......++...+...+.+++ +..+|..|++|+|+
T Consensus 56 ~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~di 130 (268)
T 3sxs_A 56 TMMKLS----HPKLVKFYGVC-SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDL 130 (268)
T ss_dssp HHHHCC----CTTBCCEEEEE-CSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSC
T ss_pred HHHhCC----CCCEeeEEEEE-ccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCc
Confidence 666653 22222222222 233456899999999999987654445578877777776666 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|.||++. .++++|||...
T Consensus 131 kp~Nil~~~~~~~~l~Dfg~~~ 152 (268)
T 3sxs_A 131 AARNCLVDRDLCVKVSDFGMTR 152 (268)
T ss_dssp SGGGEEECTTCCEEECCTTCEE
T ss_pred CcceEEECCCCCEEEccCccce
Confidence 99999964 59999999763
|
| >3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=2.2e-11 Score=152.59 Aligned_cols=188 Identities=14% Similarity=0.169 Sum_probs=116.3
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC----Ccceeeeeec---ccCccccccCCcc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL----GVGFFTVHYD---LFGTTDGFSGQDS 820 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~----~vg~v~~~~~---~~~~~~~i~g~~~ 820 (1578)
..++..+|+..+.. ++++++|.||||||++|++++|.|+++|+.+++. .+..++|..+ .+|+..++.++
T Consensus 15 ~~Lt~~~f~~~v~~--~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~-- 90 (519)
T 3t58_A 15 TLLDADSVRPTVLG--SSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGF-- 90 (519)
T ss_dssp EEECTTTHHHHHSS--CSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSB--
T ss_pred EECChHHHHHHHHh--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCccc--
Confidence 35666788888754 5689999999999999999999999999999872 3344444222 15555555554
Q ss_pred ccccccccccCccccccccccc-c-----CccCcc---cceeE-----------------EEeeccccccceecccCCCC
Q psy12972 821 ASRNFHNHMYNPFDDVFSEGFN-F-----PFEEHD---ISLFH-----------------KLSTTHWNFEKNYIPKSYTT 874 (1578)
Q Consensus 821 ~~~~~~~i~~~Ptiklf~~~~~-~-----~~~~~~---i~~~~-----------------vi~Lt~~nF~~~vl~~s~~~ 874 (1578)
||+.+|..+.. + ...+.+ +..+. ...++.+++++.+. ....+
T Consensus 91 -----------PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~-~~~~~ 158 (519)
T 3t58_A 91 -----------PTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFT-RNKAD 158 (519)
T ss_dssp -----------SEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGG-SCCCS
T ss_pred -----------CEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhc-cCCCC
Confidence 88777774211 0 000100 00000 01234455555443 24456
Q ss_pred cEEEEEEcCCCcccccccHHHHHHHHHhCCC-ceEEEEEECccchhhHhHcCccccCCcEEEEcC-CccccccCCCCCHH
Q psy12972 875 PHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD-GRTSFFKEPSFSVQ 952 (1578)
Q Consensus 875 ~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~-~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~-G~~~~y~~G~~s~~ 952 (1578)
+.++.|+... .+...+++..+... ++.+..|+- .+.+++++|||++ +|++++|.. |+........-...
T Consensus 159 ~vallF~~~~-------s~~~~~~~ldl~~~~~v~v~~v~~-~~~~l~~kfgV~~-~Pslvl~~~nGk~~~~~v~~~~r~ 229 (519)
T 3t58_A 159 YLALVFERED-------SYLGREVTLDLSQYHAVAVRRVLN-TESDLVNKFGVTD-FPSCYLLLRNGSVSRVPVLVESRS 229 (519)
T ss_dssp EEEEEEECTT-------CCHHHHHHHHTTTCTTEEEEEEET-TCHHHHHHHTCCC-SSEEEEEETTSCEEECCCSSCSHH
T ss_pred eEEEEecCCc-------hHHHHHHHHHhhccCCeeEEEecC-chHHHHHHcCCCC-CCeEEEEeCCCceeecccccccHH
Confidence 7777787654 34667777777643 377877654 4679999999997 999999954 54333222222334
Q ss_pred HHHHHHHh
Q psy12972 953 KMVEFFRL 960 (1578)
Q Consensus 953 ~L~~fi~~ 960 (1578)
.+..++++
T Consensus 230 ~~~~~l~~ 237 (519)
T 3t58_A 230 FYTSYLRG 237 (519)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHH
Confidence 45566553
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.13 E-value=1.1e-10 Score=134.48 Aligned_cols=134 Identities=16% Similarity=0.122 Sum_probs=95.2
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+++.||||+.++.... +-++.+|++
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--------------------------------------~~~~~~E~~ 71 (283)
T 3gen_A 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--------------------------------------EDEFIEEAK 71 (283)
T ss_dssp EECC---CEEEEEEEETTTEEEEEEEECTTSBC--------------------------------------HHHHHHHHH
T ss_pred hhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC--------------------------------------HHHHHHHHH
Confidence 689999999999999999999999998754211 012455666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++. +...+.+-.++ ......+|||||++|.+|.++..-....++...+...+.+++ +..+|..|++|+|+
T Consensus 72 ~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~di 146 (283)
T 3gen_A 72 VMMNLS----HEKLVQLYGVC-TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDL 146 (283)
T ss_dssp HHHTCC----CTTBCCEEEEE-CSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSC
T ss_pred HHhcCC----CCCEeeEEEEE-ecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCC
Confidence 665543 22222222222 223456899999999999887543346688877777776665 88999999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
||.||++. .++++|||...
T Consensus 147 kp~Nili~~~~~~kl~Dfg~~~ 168 (283)
T 3gen_A 147 AARNCLVNDQGVVKVSDFGLSR 168 (283)
T ss_dssp SGGGEEECTTSCEEECSTTGGG
T ss_pred ccceEEEcCCCCEEEccccccc
Confidence 99999964 59999999764
|
| >3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa} | Back alignment and structure |
|---|
Probab=99.13 E-value=4.5e-11 Score=122.09 Aligned_cols=88 Identities=19% Similarity=0.470 Sum_probs=78.1
Q ss_pred CCCcEEEEEEcCCCcccccccHHHH--HHHHHhCCCceEEEEEEC---ccchhhHhHcCc---cccCCcEEEE-cCCccc
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFK--KLMDELSPLGVGFFTVHV---HNEQGLARRLGV---GSQLPQIALL-TDGRTS 942 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~--~lA~~l~~~~v~~a~VDc---~~~~~L~~k~gV---~~~~PTl~lf-~~G~~~ 942 (1578)
.+++++|.||++||++|+.+.|.++ +++..+.+. +.++.||+ +.+.+++++|+| .+ +||+++| ++|+..
T Consensus 28 ~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~-~~~~~vd~~~~~~~~~l~~~~~v~~~~~-~Pt~~~~d~~G~~~ 105 (133)
T 3fk8_A 28 THKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKH-FEVVKIDVGNFDRNLELSQAYGDPIQDG-IPAVVVVNSDGKVR 105 (133)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHH-CEEEEEECTTTTSSHHHHHHTTCGGGGC-SSEEEEECTTSCEE
T ss_pred cCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCC-EEEEEEeCCcccchHHHHHHhCCccCCc-cceEEEECCCCCEE
Confidence 4789999999999999999999999 999988653 99999999 889999999999 98 9999999 899887
Q ss_pred cccCC-------CCCHHHHHHHHHhh
Q psy12972 943 FFKEP-------SFSVQKMVEFFRLK 961 (1578)
Q Consensus 943 ~y~~G-------~~s~~~L~~fi~~~ 961 (1578)
....| ..+.+++.+|+++.
T Consensus 106 ~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 106 YTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp EECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred EEecCCcccccccCCHHHHHHHHHHh
Confidence 66666 57888898888753
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.13 E-value=1.1e-10 Score=135.62 Aligned_cols=161 Identities=15% Similarity=0.048 Sum_probs=97.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.++.....-. + +.....+. ............-...-++.+|+
T Consensus 19 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~-~---------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~ 87 (298)
T 2zv2_A 19 DEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQA-G---------FPRRPPPR-GTRPAPGGCIQPRGPIEQVYQEI 87 (298)
T ss_dssp EEEEC--CCEEEEEEETTTTEEEEEEEEECC------------------------------------------CHHHHHH
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhc-c---------cccccccc-cccccccccccccchHHHHHHHH
Confidence 68999999999999964 7999999998765321100 0 00000000 00000000000001112467777
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +..-+.+-.++.+- ...-+|||||++|.++.++. ....++...+...+.+++ +..+|..|++|+
T Consensus 88 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~ 161 (298)
T 2zv2_A 88 AILKKLD----HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP--TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHR 161 (298)
T ss_dssp HHHHTCC----CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS--CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHhCC----CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 7776653 33334444554432 23458999999999998863 345677777766666655 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+||.|||+. .++++|||....
T Consensus 162 Dlkp~Nil~~~~~~~kl~Dfg~~~~ 186 (298)
T 2zv2_A 162 DIKPSNLLVGEDGHIKIADFGVSNE 186 (298)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEE
T ss_pred CCCHHHEEECCCCCEEEecCCCccc
Confidence 9999999964 599999997643
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=99.12 E-value=2e-10 Score=136.24 Aligned_cols=138 Identities=19% Similarity=0.145 Sum_probs=96.4
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+........ .+ . -.+.+|+
T Consensus 21 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~--~~---------------------------~------~~~~~E~ 65 (328)
T 3fe3_A 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNP--TS---------------------------L------QKLFREV 65 (328)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--HH---------------------------H------HHHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCH--HH---------------------------H------HHHHHHH
Confidence 6899999999999996 589999999986432110 00 0 1134566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+-.++ .-....+|||||++|.++.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 66 ~~l~~l~----hpnIv~l~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrD 139 (328)
T 3fe3_A 66 RIMKILN----HPNIVKLFEVI-ETEKTLYLIMEYASGGEVFDYLV-AHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRD 139 (328)
T ss_dssp HHHHHCC----CTTBCCEEEEE-ECSSEEEEEECCCTTCBHHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHhCC----CCCEeeEEEEE-EECCEEEEEEECCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccC
Confidence 6665543 32223333333 22345689999999999988643 335677776666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
+||+|||+. .++++|||....+
T Consensus 140 lkp~NIll~~~~~~kl~DFG~a~~~ 164 (328)
T 3fe3_A 140 LKAENLLLDADMNIKIADFGFSNEF 164 (328)
T ss_dssp CCGGGEEECTTSCEEECSTTCCGGG
T ss_pred CCHHHEEEcCCCCEEEeeccCceec
Confidence 999999964 5999999977543
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=99.12 E-value=7.5e-11 Score=150.33 Aligned_cols=149 Identities=17% Similarity=0.107 Sum_probs=95.5
Q ss_pred CChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHH
Q psy12972 397 CTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKV 475 (1578)
Q Consensus 397 ~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 475 (1578)
..+++ |.-. +.||.||+|.||+|+.+ +|+.||||+.....-.. .+ .
T Consensus 186 ~sldd-f~i~--k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~--~~------------------~---------- 232 (689)
T 3v5w_A 186 LTMND-FSVH--RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM--KQ------------------G---------- 232 (689)
T ss_dssp CCGGG-EEEE--EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TT------------------C----------
T ss_pred CchHH-eEEE--EEEecccCeEEEEEEECCCCCEEEEEEEeHHHcch--hh------------------h----------
Confidence 34444 4444 68999999999999975 79999999986431100 00 0
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--
Q psy12972 476 PLEQELDFLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 476 ~l~~ElDf~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~-- 552 (1578)
+--...|..-+. +.... ++|. |.+=..+.+ ...-+|||||++|+.|.+... ....++...+...+.+++
T Consensus 233 ----~~~~~~E~~~l~-ll~~~-~HP~IV~l~~~f~~-~~~lylVmEy~~GGdL~~~l~-~~~~l~E~~a~~y~~qIl~a 304 (689)
T 3v5w_A 233 ----ETLALNERIMLS-LVSTG-DCPFIVCMSYAFHT-PDKLSFILDLMNGGDLHYHLS-QHGVFSEADMRFYAAEIILG 304 (689)
T ss_dssp ----HHHHHHHHHHHH-HHSSS-CCTTBCCEEEEEEC-SSEEEEEECCCCSCBHHHHHH-HHCCCCHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHH-HHhhC-CCCCEeEEEEEEEE-CCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 000111211111 11112 2333 333333321 234579999999999988743 334577766666666655
Q ss_pred HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++.+|..|++|||+||.|||+. .++++|||.+..
T Consensus 305 L~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp HHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred HHHHHHCCccccCCchHHeEEeCCCCEEecccceeee
Confidence 8899999999999999999964 699999998643
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.12 E-value=1e-10 Score=138.26 Aligned_cols=136 Identities=18% Similarity=0.198 Sum_probs=96.3
Q ss_pred cccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+.. .+..||||+.+.+..... .-+|.
T Consensus 55 ~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~~~ 98 (325)
T 3kul_A 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ------------------------------------RRDFL 98 (325)
T ss_dssp EEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHH------------------------------------HHHHH
T ss_pred eEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHH------------------------------------HHHHH
Confidence 68999999999999975 345699999875432210 11345
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++. +..-+.+-.++ ......+|||||++|.+|.++.......++...+...+.+++ +..+|..|++
T Consensus 99 ~E~~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~iv 173 (325)
T 3kul_A 99 SEASIMGQFD----HPNIIRLEGVV-TRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYV 173 (325)
T ss_dssp HHHHHHTTCC----CTTBCCEEEEE-CGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhCC----CCCCCcEEEEE-EeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 6666665542 22222222222 223446899999999999887543445677777777766665 7899999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.|||+. .++++|||...
T Consensus 174 H~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 174 HRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp CSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred CCCCCcceEEECCCCCEEECCCCccc
Confidence 999999999965 58999999764
|
| >2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A | Back alignment and structure |
|---|
Probab=99.12 E-value=1.2e-11 Score=117.57 Aligned_cols=55 Identities=20% Similarity=0.439 Sum_probs=50.4
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCCh----hHHHHHHHHHHHHHHcCC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDP----TAQEKFLQLTEAYNILSD 691 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----~a~~~f~~i~~Ay~~L~d 691 (1578)
.++|++|||++.||.++||+|||+++++|||||+++. .|+++|++|++||++|.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 5889999999999999999999999999999998753 378899999999999964
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=99.11 E-value=4e-10 Score=135.81 Aligned_cols=137 Identities=18% Similarity=0.160 Sum_probs=94.7
Q ss_pred cccccccceEEEEEEec--------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK--------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQE 480 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 480 (1578)
+.||.|++|+||+|+.. +|+.||||+.+...... + .
T Consensus 87 ~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~---~---------------------------------~ 130 (370)
T 2psq_A 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---D---------------------------------L 130 (370)
T ss_dssp EEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHH---H---------------------------------H
T ss_pred eEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHH---H---------------------------------H
Confidence 68999999999999852 46789999987643211 0 0
Q ss_pred HhHHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------cCCCHHHH
Q psy12972 481 LDFLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------------KGFSLADV 544 (1578)
Q Consensus 481 lDf~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------------~~~~~~~v 544 (1578)
-++.+|++.+.++. .++. +.+-..+ .....-+|||||++|.+|.++..-.. ..++..++
T Consensus 131 ~~~~~E~~~l~~l~----~hpnIv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (370)
T 2psq_A 131 SDLVSEMEMMKMIG----KHKNIINLLGAC-TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205 (370)
T ss_dssp HHHHHHHHHHHHSC----CCTTBCCEEEEE-CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHH
T ss_pred HHHHHHHHHHHHhc----CCCCEeeEEEEE-ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHH
Confidence 12456666666652 2332 2332222 22345689999999999988743211 23566666
Q ss_pred HHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 545 DRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 545 ~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
...+.+++ +..+|..|++|+|+||.|||+. .++++|||....
T Consensus 206 ~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 252 (370)
T 2psq_A 206 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 252 (370)
T ss_dssp HHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred HHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcc
Confidence 66666655 7889999999999999999974 599999997643
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.10 E-value=1.1e-10 Score=141.00 Aligned_cols=137 Identities=19% Similarity=0.232 Sum_probs=94.1
Q ss_pred cccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+.+.... ..-+|.
T Consensus 51 ~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~ 94 (373)
T 2qol_A 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK------------------------------------QRRDFL 94 (373)
T ss_dssp EEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHH------------------------------------HHHHHH
T ss_pred eEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHH------------------------------------HHHHHH
Confidence 68999999999999975 67889999987643211 012356
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++ .+...+.+-.++ ......+|||||++|.+|.++..-....++...+...+.+++ +..+|..|++
T Consensus 95 ~E~~~l~~l----~h~niv~~~~~~-~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 169 (373)
T 2qol_A 95 GEASIMGQF----DHPNIIRLEGVV-TKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169 (373)
T ss_dssp HHHHHHTTC----CCTTBCCEEEEE-CSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhC----CCCCCCeEEEEE-eeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 666666554 233223333333 223456899999999999887543334577777777666665 8889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+|++|.|||+. .++++|||....
T Consensus 170 H~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 170 HRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp CSCCCGGGEEECTTCCEEECCC-----
T ss_pred CCCCCcceEEEcCCCCEEECcCccccc
Confidence 999999999975 589999997643
|
| >3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.10 E-value=2.7e-11 Score=133.23 Aligned_cols=66 Identities=20% Similarity=0.286 Sum_probs=59.3
Q ss_pred ccCCCccccccccc--CCHHHHHHHhhhhhhhcCCCCCCCh------hHHHHHHHHHHHHHHcCCHHHHHhccc
Q psy12972 635 VSLDPYETLGVPRT--ASLQEIRKNYKRLVVEWHPDKNNDP------TAQEKFLQLTEAYNILSDAERRKQYDL 700 (1578)
Q Consensus 635 ~~~d~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~------~a~~~f~~i~~Ay~~L~d~~~R~~yD~ 700 (1578)
...|||++|||+++ +|.++||++||+|+++|||||+++. .+.++|++|++||++|+||.+|+.||.
T Consensus 41 ~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 41 PTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp TTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 46799999999986 7899999999999999999998742 256789999999999999999999995
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=1e-10 Score=141.25 Aligned_cols=136 Identities=19% Similarity=0.155 Sum_probs=98.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.++..... ..-+|.+|+
T Consensus 120 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~~E~ 163 (377)
T 3cbl_A 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD------------------------------------LKAKFLQEA 163 (377)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHH------------------------------------HHTTTTHHH
T ss_pred eEeccCCCCeEEEEEEecCCeEEEEEEccccCCHH------------------------------------HHHHHHHHH
Confidence 68999999999999986 89999999987543211 011345666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+-.++ .....-+|||||++|.+|.+...-....++...+...+.++. +..+|..|++|+|
T Consensus 164 ~~l~~l~----hpniv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrD 238 (377)
T 3cbl_A 164 RILKQYS----HPNIVRLIGVC-TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRD 238 (377)
T ss_dssp HHHTTCC----CTTBCCEEEEE-CSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHhCC----CCCEEEEEEEE-ecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcc
Confidence 6665542 32223333333 223456899999999999887554444577777777666665 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 239 lkp~Nil~~~~~~~kl~DfG~s~ 261 (377)
T 3cbl_A 239 LAARNCLVTEKNVLKISDFGMSR 261 (377)
T ss_dssp CSGGGEEECTTCCEEECCGGGCE
T ss_pred cCHHHEEEcCCCcEEECcCCCce
Confidence 999999965 59999999753
|
| >3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.08 E-value=2.9e-11 Score=118.78 Aligned_cols=57 Identities=23% Similarity=0.259 Sum_probs=51.1
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCCh--------hHHHHHHHHHHHHHHcCCHH
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDP--------TAQEKFLQLTEAYNILSDAE 693 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--------~a~~~f~~i~~Ay~~L~d~~ 693 (1578)
..|+|++||++. ||.++||+|||+++++|||||++++ .|+++|++|++||++|+|+.
T Consensus 40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 479999999996 9999999999999999999997631 36889999999999999974
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.08 E-value=4e-10 Score=135.05 Aligned_cols=137 Identities=18% Similarity=0.111 Sum_probs=93.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+......- .+ .-.+..|.
T Consensus 29 ~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~-~~---------------------------------~~~~~~E~ 74 (353)
T 3txo_A 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQD-DD---------------------------------VECTMTEK 74 (353)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHH-TT---------------------------------HHHHHHHH
T ss_pred EEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcch-hH---------------------------------HHHHHHHH
Confidence 68999999999999975 799999999875421100 00 00123444
Q ss_pred HHHHHHHHhhCCCCCe-eecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYV-YIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v-~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +++.| .+-..+ .....-+|||||++|..|.+... ....++...+...+.+++ ++.+|..|++||
T Consensus 75 ~il~~~~----~hp~Iv~l~~~~-~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~givHr 148 (353)
T 3txo_A 75 RILSLAR----NHPFLTQLFCCF-QTPDRLFFVMEFVNGGDLMFHIQ-KSRRFDEARARFYAAEIISALMFLHDKGIIYR 148 (353)
T ss_dssp HHHHHTT----TCTTBCCEEEEE-ECSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC
T ss_pred HHHHhcc----CCCceeeEEEEE-EeCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 4444432 33432 222222 22345689999999999987643 335677776666666655 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+||.|||+. .++++|||...
T Consensus 149 Dlkp~NILl~~~g~ikL~DFG~a~ 172 (353)
T 3txo_A 149 DLKLDNVLLDHEGHCKLADFGMCK 172 (353)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCB
T ss_pred CCCHHHEEECCCCCEEEcccccee
Confidence 9999999964 59999999753
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=2.2e-10 Score=134.62 Aligned_cols=135 Identities=16% Similarity=0.150 Sum_probs=93.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+.++|+.||||+..+.-.... -.+.+|++
T Consensus 45 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-------------------------------------~~~~~E~~ 87 (321)
T 2qkw_B 45 FLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGI-------------------------------------EEFETEIE 87 (321)
T ss_dssp CCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHH-------------------------------------HHHHHHHH
T ss_pred ceeecCCCeeEEEEEECCCCEEEEEEecccChHHH-------------------------------------HHHHHHHH
Confidence 57999999999999998999999998776422110 02345555
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh---hcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL---EKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~---~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
.+.++ .+..-+.+-..+ ......+|||||++|.+|.+...-. ...++...+...+.+++ +..+|..|++|
T Consensus 88 ~l~~l----~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH 162 (321)
T 2qkw_B 88 TLSFC----RHPHLVSLIGFC-DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIH 162 (321)
T ss_dssp GGGSC----CCTTBCCEEEEC-CCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHhC----CCCCEeeEEEEE-cCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeec
Confidence 54433 222222222222 2335568999999999998874311 12366666666666655 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|.||++. .++++|||...
T Consensus 163 ~dlkp~Nil~~~~~~~kl~Dfg~~~ 187 (321)
T 2qkw_B 163 RDVKSINILLDENFVPKITDFGISK 187 (321)
T ss_dssp SCCCSTTEEECTTCCEEECCCTTCE
T ss_pred CCCCHHHEEECCCCCEEEeeccccc
Confidence 99999999965 58999999753
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.07 E-value=2.3e-10 Score=133.01 Aligned_cols=149 Identities=19% Similarity=0.223 Sum_probs=100.7
Q ss_pred CCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHH
Q psy12972 396 GCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELK 474 (1578)
Q Consensus 396 G~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~ 474 (1578)
|.-+.+-|.-. +.||.|++|+||+|+.. +|+.||||+........ .+..
T Consensus 6 g~~~~~~y~i~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------------~~~~ 55 (294)
T 4eqm_A 6 GKIINERYKIV--DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREK----------------------------EETL 55 (294)
T ss_dssp SSCEETTEEEE--EEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCC----------------------------HHHH
T ss_pred hhHhhccEEEE--EEEccCCCEEEEEEEECCCCCeEEEEEeccCcccc----------------------------HHHH
Confidence 44445555555 68999999999999964 79999999875432110 0000
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--
Q psy12972 475 VPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 475 ~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~-- 552 (1578)
-.|.+|++.+.++. +..-+.+-.++ +.....+|||||++|.+|.++.. ....++...+...+.+++
T Consensus 56 ------~~~~~e~~~l~~l~----hp~iv~~~~~~-~~~~~~~lv~e~~~g~~L~~~l~-~~~~~~~~~~~~~~~qi~~~ 123 (294)
T 4eqm_A 56 ------KRFEREVHNSSQLS----HQNIVSMIDVD-EEDDCYYLVMEYIEGPTLSEYIE-SHGPLSVDTAINFTNQILDG 123 (294)
T ss_dssp ------HHHHHHHHHHTTCC----BTTBCCEEEEE-ECSSEEEEEEECCCSCBHHHHHH-HHCSCCHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHhcCC----CCCCceEEEee-eeCCeEEEEEeCCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 12456666665543 22222222222 22345689999999999988743 234577777776666665
Q ss_pred HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+..+|..|++|+|+||.|||+. .++++|||....
T Consensus 124 l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 160 (294)
T 4eqm_A 124 IKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKA 160 (294)
T ss_dssp HHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTT
T ss_pred HHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccc
Confidence 7899999999999999999964 599999997643
|
| >1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A | Back alignment and structure |
|---|
Probab=99.07 E-value=1.1e-10 Score=118.04 Aligned_cols=101 Identities=16% Similarity=0.281 Sum_probs=84.7
Q ss_pred EeeccccccceecccCCCCcEEEEEEcC-------CCcccccccHHHHHHHHHhCCCceEEEEEEC-------ccchhhH
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSD-------WCFACLQVEPIFKKLMDELSPLGVGFFTVHV-------HNEQGLA 921 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~Fyap-------wCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc-------~~~~~L~ 921 (1578)
...+.++|.+.+... .+++++|.|||+ ||++|+.+.|.++++++.+.+. +.|+.||+ +.+..++
T Consensus 8 ~~~~~~~~~~~~~~~-~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~-~~~~~vd~~~~~~~~d~~~~~~ 85 (123)
T 1wou_A 8 SVSGFEEFHRAVEQH-NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEG-CVFIYCQVGEKPYWKDPNNDFR 85 (123)
T ss_dssp EEESHHHHHHHHHTT-TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTT-EEEEEEECCCHHHHHCTTCHHH
T ss_pred EeccHHHHHHHHHHh-CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCC-cEEEEEECCCchhhhchhHHHH
Confidence 346778888877542 378999999999 9999999999999999998764 99999999 7888999
Q ss_pred hHcCccccCCcEEEEcCCccccccCCCCCHHHHHHHHHh
Q psy12972 922 RRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRL 960 (1578)
Q Consensus 922 ~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~ 960 (1578)
++|+|.+ +||+++|.+|.......| .+.+.|.+|+.+
T Consensus 86 ~~~~i~~-~Pt~~~~~~~~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 86 KNLKVTA-VPTLLKYGTPQKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHCCCS-SSEEEETTSSCEEEGGGG-GCHHHHHHHHHC
T ss_pred HHCCCCe-eCEEEEEcCCceEecccc-CCHHHHHHHHhc
Confidence 9999998 999999988766554434 567888888864
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.07 E-value=3.2e-10 Score=132.51 Aligned_cols=135 Identities=15% Similarity=0.139 Sum_probs=96.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+....-.. ..-.|.+|+
T Consensus 16 ~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~-------------------------------------~~~~~~~E~ 58 (310)
T 3s95_A 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEE-------------------------------------TQRTFLKEV 58 (310)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEESCCCHH-------------------------------------HHHHHHHHH
T ss_pred ceecCCCCEEEEEEEECCCCcEEEEEEeccCCHH-------------------------------------HHHHHHHHH
Confidence 67999999999999975 7999999987542111 011345666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-.++. .....+|||||++|.+|.++..-....++...+...+.+++ +..+|..|++|+|
T Consensus 59 ~~l~~l~----hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~d 133 (310)
T 3s95_A 59 KVMRCLE----HPNVLKFIGVLY-KDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRD 133 (310)
T ss_dssp HHHTTCC----CTTBCCEEEEEE-ETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHhCC----CcCcccEEEEEe-cCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence 6665542 322233333332 23456799999999999987543345677777766666665 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 134 lkp~Nil~~~~~~~kl~Dfg~~~ 156 (310)
T 3s95_A 134 LNSHNCLVRENKNVVVADFGLAR 156 (310)
T ss_dssp CSTTSEEECTTSCEEECCCTTCE
T ss_pred CCcCeEEECCCCCEEEeecccce
Confidence 999999965 58999999763
|
| >2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A | Back alignment and structure |
|---|
Probab=99.07 E-value=9.8e-11 Score=120.25 Aligned_cols=101 Identities=11% Similarity=0.104 Sum_probs=87.7
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccc-cCCcEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGS-QLPQIA 934 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~-~~PTl~ 934 (1578)
.++|.+||.+.+ +...+++|.|||+ |++|+.+.|.++++|+++++. +.|++||.++++.+++.|||++ ..||++
T Consensus 9 ~~~t~~~f~~~~---~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~~~~~a~~~gi~~~~iPtl~ 83 (133)
T 2djk_A 9 GEIGPETYSDYM---SAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKAFGAHAGNLNLKTDKFPAFA 83 (133)
T ss_dssp EECCHHHHHHHH---HTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTTTGGGTTTTTCCSSSSSEEE
T ss_pred eccChHHHHHHh---cCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHHhHHHHHHcCCCcccCCEEE
Confidence 467899998764 4478999999999 899999999999999999887 9999999999999999999983 289999
Q ss_pred EEcC--CccccccC--CCCCHHHHHHHHHhhC
Q psy12972 935 LLTD--GRTSFFKE--PSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~--G~~~~y~~--G~~s~~~L~~fi~~~l 962 (1578)
+|++ |+.. ... |..+.+.|.+|+.+.+
T Consensus 84 i~~~~~g~~~-~~~~~g~~~~~~l~~fi~~~l 114 (133)
T 2djk_A 84 IQEVAKNQKF-PFDQEKEITFEAIKAFVDDFV 114 (133)
T ss_dssp EECTTTCCBC-CCCSSSCCCHHHHHHHHHHHH
T ss_pred EEecCcCccc-CCCCccccCHHHHHHHHHHHH
Confidence 9987 6663 333 8899999999998766
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=4.5e-10 Score=130.92 Aligned_cols=133 Identities=16% Similarity=0.132 Sum_probs=94.7
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+....-... . -.+.+|+
T Consensus 26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------~--------------~~~~~E~ 68 (297)
T 3fxz_A 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-----------------------K--------------ELIINEI 68 (297)
T ss_dssp EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC-----------------------H--------------HHHHHHH
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEeecccccH-----------------------H--------------HHHHHHH
Confidence 6799999999999995 589999999986432111 0 0134455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++ .+..-+.+-..+. .....+|||||++|.+|.++ +...+++...+...+.+++ +..+|..|++|+|
T Consensus 69 ~~l~~l----~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~D 141 (297)
T 3fxz_A 69 LVMREN----KNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQALEFLHSNQVIHRD 141 (297)
T ss_dssp HHHHHC----CCTTBCCEEEEEE-ETTEEEEEEECCTTCBHHHH--HHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHhcC----CCCCCCeEeEEEE-ECCEEEEEEECCCCCCHHHH--HhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCC
Confidence 555443 2322233323322 23456899999999999887 3456788777777666665 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 142 lkp~Nil~~~~~~~kl~Dfg~~~ 164 (297)
T 3fxz_A 142 IKSDNILLGMDGSVKLTDFGFCA 164 (297)
T ss_dssp CSGGGEEECTTCCEEECCCTTCE
T ss_pred CCHHHEEECCCCCEEEeeCCCce
Confidence 999999964 69999999753
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=2.3e-10 Score=135.21 Aligned_cols=132 Identities=16% Similarity=0.147 Sum_probs=95.4
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+....-.. -++.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------------------------------------~~~~~E~ 55 (330)
T 2izr_A 15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA---------------------------------------PQLHLEY 55 (330)
T ss_dssp EECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS---------------------------------------CCHHHHH
T ss_pred EEeeccCCceEEEEEECCCCcEEEEEEeccccch---------------------------------------HHHHHHH
Confidence 6799999999999995 58999999987532110 0245666
Q ss_pred HHHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+.++. +++. +++++. ......+|||||+ |.+|.++.......++...+...+.+++ +..+|..|++|
T Consensus 56 ~~l~~l~----~h~~--i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiH 128 (330)
T 2izr_A 56 RFYKQLG----SGDG--IPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIY 128 (330)
T ss_dssp HHHHHHC----SCTT--SCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHhh----CCCC--CCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 6666663 2232 223322 2234568999999 9999987654456788887777777766 88999999999
Q ss_pred cCCCCCCCCCC---e-----eEEecCCchhh
Q psy12972 564 ADPHSGNDVNT---W-----LYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~---~-----v~liDfG~~~~ 586 (1578)
+|++|.|||+. . ++++|||....
T Consensus 129 rDlkp~Nill~~~~~~~~~~~kl~DFg~a~~ 159 (330)
T 2izr_A 129 RDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159 (330)
T ss_dssp CCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred cCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence 99999999965 2 89999997643
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=4.2e-10 Score=128.09 Aligned_cols=134 Identities=17% Similarity=0.107 Sum_probs=97.1
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+|+.||||+.++..... -++.+|++
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~--------------------------------------~~~~~e~~ 55 (267)
T 3t9t_A 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--------------------------------------EDFIEEAE 55 (267)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTTBCH--------------------------------------HHHHHHHH
T ss_pred eEecCCCceeEEEEEecCCCeEEEEEccccCCCH--------------------------------------HHHHHHHH
Confidence 6799999999999999899999999987543210 12455666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++. +..-+.+-.++ ......++||||++|.+|.++.......++...+...+.+++ +..+|..|++|+|+
T Consensus 56 ~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl 130 (267)
T 3t9t_A 56 VMMKLS----HPKLVQLYGVC-LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 130 (267)
T ss_dssp HHHTCC----CTTBCCEEEEE-CSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSC
T ss_pred HHHhCC----CCCEeeEEEEE-ccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 665542 22222322332 223456899999999999887543334477777776666665 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|.||++. .++++|||...
T Consensus 131 ~p~Nili~~~~~~kl~dfg~~~ 152 (267)
T 3t9t_A 131 AARNCLVGENQVIKVSDFGMTR 152 (267)
T ss_dssp CGGGEEECGGGCEEECCTTGGG
T ss_pred chheEEECCCCCEEEccccccc
Confidence 99999975 58999999764
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.05 E-value=3.7e-10 Score=133.59 Aligned_cols=138 Identities=17% Similarity=0.104 Sum_probs=97.0
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+.. +|+.||||+.++..... ..-+
T Consensus 53 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 96 (343)
T 1luf_A 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD------------------------------------MQAD 96 (343)
T ss_dssp EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHH------------------------------------HHHH
T ss_pred eeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHH------------------------------------HHHH
Confidence 67999999999999974 45899999987543211 0113
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-----------------------cCC
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-----------------------KGF 539 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-----------------------~~~ 539 (1578)
|.+|++.+.++. +..-+.+-.++ ......+|||||++|.+|.++..-.. ..+
T Consensus 97 ~~~E~~~l~~l~----hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (343)
T 1luf_A 97 FQREAALMAEFD----NPNIVKLLGVC-AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171 (343)
T ss_dssp HHHHHHHHHTCC----CTTBCCEEEEE-CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCC
T ss_pred HHHHHHHHHhCC----CCCEEEEEEEE-ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCC
Confidence 456776666652 32223333333 22455689999999999988743211 346
Q ss_pred CHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 540 SLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 540 ~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+...+...+.+++ +..+|..|++|+|++|.|||+. .++++|||....+
T Consensus 172 ~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 224 (343)
T 1luf_A 172 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 224 (343)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCccc
Confidence 6666666666655 7889999999999999999975 5999999987544
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=3.5e-10 Score=132.67 Aligned_cols=145 Identities=15% Similarity=0.190 Sum_probs=95.2
Q ss_pred ChhhhccccCCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 398 THSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 398 ~~~~iF~~fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
.+.+-|... +.||.|++|.||+|+..+|+.||||+.+...... ..
T Consensus 18 ~l~~~y~~~--~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-----------------------------~~---- 62 (311)
T 3niz_A 18 GLMEKYQKL--EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDE-----------------------------GI---- 62 (311)
T ss_dssp CSSCEEEEE--EEEEECSSCEEEEEEETTSCEEEEEEEC-----------------------------------CH----
T ss_pred chHhhhHhh--hhccCCCCeEEEEEEECCCCEEEEEEEecccccc-----------------------------hh----
Confidence 334444444 6899999999999999899999999986432110 00
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
.-.+.+|++.+.++. +..-+.+-.++ .....-+|||||++| .+.+.......+++...+...+.+++ +..
T Consensus 63 --~~~~~~E~~~l~~l~----hp~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~ 134 (311)
T 3niz_A 63 --PSTAIREISLLKELH----HPNIVSLIDVI-HSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAH 134 (311)
T ss_dssp --HHHHHHHHHHHHHCC----CTTBCCEEEEE-CCSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHH
T ss_pred --hHHHHHHHHHHHHcC----CCCEeeeeeEE-ccCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 012345666665552 32223332333 223445899999987 44444322234577777766666655 788
Q ss_pred HHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 556 IFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|..|++|+|+||.|||+. .++++|||...
T Consensus 135 LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 167 (311)
T 3niz_A 135 CHQHRILHRDLKPQNLLINSDGALKLADFGLAR 167 (311)
T ss_dssp HHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred HHHCCcccCCCchHhEEECCCCCEEEccCcCce
Confidence 9999999999999999964 58999999764
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=4e-10 Score=129.20 Aligned_cols=138 Identities=20% Similarity=0.192 Sum_probs=94.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+....... .+.++.+|.
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------------~~~~~~~e~ 61 (289)
T 1x8b_A 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV-----------------------------------DEQNALREV 61 (289)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSH-----------------------------------HHHHHHHHH
T ss_pred hhhcCCCceEEEEEEEcCCCceEEEEEecccccccH-----------------------------------HHHHHHHHH
Confidence 68999999999999976 899999999875432210 112234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---cCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---KGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
..+.++. .+..-+.+-.++ ......+|||||++|.+|.++..-.. ..++...+...+.+++ +..+|..|++
T Consensus 62 ~~~~~l~---~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~iv 137 (289)
T 1x8b_A 62 YAHAVLG---QHSHVVRYFSAW-AEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLV 137 (289)
T ss_dssp HHHHHSC---SCTTBCCEEEEE-EETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHhC---CCCCeeeeeeee-ecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 4444431 222223333332 22345689999999999998754221 4467777766666665 7889999999
Q ss_pred ccCCCCCCCCCC----------------------eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT----------------------WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~----------------------~v~liDfG~~~ 585 (1578)
|+|++|.|||+. .++++|||...
T Consensus 138 H~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~ 182 (289)
T 1x8b_A 138 HMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 182 (289)
T ss_dssp CSCCSGGGEEEC--------------------CCCEEECCCTTCE
T ss_pred ecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEccccccc
Confidence 999999999975 47888888653
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=6.4e-11 Score=150.72 Aligned_cols=140 Identities=16% Similarity=0.120 Sum_probs=89.1
Q ss_pred ccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
-..+++-|+++.++. ..|+.||||+......... .+-.. .+ ..--+|++|++
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~--------------------~~~~~-----~~--~~~~~~~~E~~ 293 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGI--------------------LTAEE-----SQ--RNKYELHNEIK 293 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTC--------------------SCHHH-----HH--HHHHHHHHHHH
T ss_pred ccccCCcccccccccccccceeEEEEEeccccccc--------------------chhhh-----hH--HHHHHHHHHHH
Confidence 456777787777763 4799999999875432111 00000 00 01124677887
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~Dp 566 (1578)
-++++.. ...||+++..+ ...-+||||||+|.+|.++.. ....++..+++..++++ ++.+|..|+||||+
T Consensus 294 ~l~~~~~------~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~-~~~~l~~~~I~~QIl~A-L~ylH~~GIIHRDI 365 (569)
T 4azs_A 294 FLTQPPA------GFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLA-AGEEIDREKILGSLLRS-LAALEKQGFWHDDV 365 (569)
T ss_dssp HHHSCCT------TCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHH-TTCCCCHHHHHHHHHHH-HHHHHHTTCEESCC
T ss_pred HHHhcCC------CCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHH-hCCCCCHHHHHHHHHHH-HHHHHHCCceeccC
Confidence 7776632 24577776543 345689999999999999753 33456777777666654 78999999999999
Q ss_pred CCCCCCCC---eeEEecCCch
Q psy12972 567 HSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~ 584 (1578)
||+|||++ .++++|||..
T Consensus 366 KPeNILL~~dg~vKL~DFGlA 386 (569)
T 4azs_A 366 RPWNVMVDARQHARLIDFGSI 386 (569)
T ss_dssp CGGGEEECTTSCEEECCCTTE
T ss_pred chHhEEECCCCCEEEeecccC
Confidence 99999964 5888888865
|
| >3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A | Back alignment and structure |
|---|
Probab=99.05 E-value=3.8e-11 Score=129.30 Aligned_cols=69 Identities=32% Similarity=0.463 Sum_probs=61.2
Q ss_pred hccccCCCcccc------cccc-cCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccC
Q psy12972 632 NCAVSLDPYETL------GVPR-TASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFG 702 (1578)
Q Consensus 632 ~~~~~~d~y~iL------gv~~-~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~ 702 (1578)
......|||++| |+++ ++|.++||++||++++++|||+++. +.++|++|++||++|+||.+|+.||...
T Consensus 6 ~~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~--a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 6 QRRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ--GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp -CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS--CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc--HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 355678999999 4655 8999999999999999999999875 6789999999999999999999999843
|
| >2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.05 E-value=1.6e-11 Score=112.15 Aligned_cols=58 Identities=17% Similarity=0.277 Sum_probs=51.3
Q ss_pred ccCCCcccccccc-cCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHH
Q psy12972 635 VSLDPYETLGVPR-TASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERR 695 (1578)
Q Consensus 635 ~~~d~y~iLgv~~-~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R 695 (1578)
...++|++|||++ ++|.++||++||++++++|||++++ .++|++|++||++|+|+..|
T Consensus 12 ~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~---~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 12 NSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS---PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp CHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC---HHHHHHHHHHHHHHHHHCCC
T ss_pred CHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC---HHHHHHHHHHHHHHhhhhhc
Confidence 3458899999998 7999999999999999999999754 56999999999999987543
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=3.5e-10 Score=131.33 Aligned_cols=137 Identities=15% Similarity=0.056 Sum_probs=95.0
Q ss_pred cccccccceEEEEEEe-----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVT-----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|.||+|+. .+|+.||||+.++...... .-++
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~~ 70 (302)
T 4e5w_A 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH------------------------------------IADL 70 (302)
T ss_dssp EEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CC------------------------------------HHHH
T ss_pred hccCCCCceEEEEEEEccccCccCeEEEEEEecccccchh------------------------------------HHHH
Confidence 6799999999999983 4799999999876432110 0123
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|++.+.+++ +...+.+-.++.+-. ..-+|||||++|.+|.++..-....++...+...+.+++ +..+|..|
T Consensus 71 ~~E~~~l~~l~----h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 146 (302)
T 4e5w_A 71 KKEIEILRNLY----HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 146 (302)
T ss_dssp HHHHHHHHTCC----CTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCC----CCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCC
Confidence 45665555542 333233333333221 335799999999999988644445677777777666665 88999999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.||++. .++++|||...
T Consensus 147 i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 147 YVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred cccCCCchheEEEcCCCCEEECcccccc
Confidence 99999999999964 59999999764
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.05 E-value=3.6e-10 Score=130.63 Aligned_cols=134 Identities=19% Similarity=0.231 Sum_probs=96.9
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+. .+|+.||||+....... -++.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------------------------------------~~~~~e~ 55 (296)
T 3uzp_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---------------------------------------PQLHIES 55 (296)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC---------------------------------------CHHHHHH
T ss_pred EEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch---------------------------------------hHHHHHH
Confidence 6899999999999996 58999999987543211 0235566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++.+ .+.+..-..+.......+|||||+ |.+|.++.......++...+...+.+++ +..+|..|++|+|
T Consensus 56 ~~l~~l~~----~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d 130 (296)
T 3uzp_A 56 KIYKMMQG----GVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRD 130 (296)
T ss_dssp HHHHHHTT----STTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHHhhc----CCCCCccccccCCCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCC
Confidence 66666542 222222233333344568999999 8899887654455688877777666666 7889999999999
Q ss_pred CCCCCCCCC------eeEEecCCchhh
Q psy12972 566 PHSGNDVNT------WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~------~v~liDfG~~~~ 586 (1578)
++|.|||++ .++++|||....
T Consensus 131 lkp~NIl~~~~~~~~~~kl~Dfg~~~~ 157 (296)
T 3uzp_A 131 VKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp CCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred CCHHHeEEecCCCCCeEEEeeCCCccc
Confidence 999999973 489999997643
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=9.1e-10 Score=131.41 Aligned_cols=137 Identities=16% Similarity=0.092 Sum_probs=92.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+......- .+ .+ .+..|.
T Consensus 15 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~---------------------------~~------~~~~E~ 60 (345)
T 3a8x_A 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-ED---------------------------ID------WVQTEK 60 (345)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSH-HH---------------------------HH------HHHHHH
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcch-HH---------------------------HH------HHHHHH
Confidence 67999999999999976 799999999875432100 00 00 123344
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++ .+++. +.+-..+ .....-+|||||++|..|.+... ....++...+...+.+++ ++.+|..|++|+
T Consensus 61 ~~l~~~----~~hp~iv~l~~~~-~~~~~~~lv~e~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHr 134 (345)
T 3a8x_A 61 HVFEQA----SNHPFLVGLHSCF-QTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISLALNYLHERGIIYR 134 (345)
T ss_dssp HHHHHT----TTCTTBCCEEEEE-ECSSEEEEEECCCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC
T ss_pred HHHHhc----CCCCccCeEEEEE-EeCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence 444333 12333 2222232 22345689999999999987643 234577766666655555 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+||.|||+. .++++|||...
T Consensus 135 Dlkp~NIll~~~g~~kL~DFG~a~ 158 (345)
T 3a8x_A 135 DLKLDNVLLDSEGHIKLTDYGMCK 158 (345)
T ss_dssp CCCGGGEEECTTSCEEECCGGGCB
T ss_pred CCCHHHEEECCCCCEEEEeccccc
Confidence 9999999964 59999999764
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=5.1e-10 Score=132.37 Aligned_cols=139 Identities=17% Similarity=0.088 Sum_probs=91.2
Q ss_pred cccccccceEEEEEEe----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVT----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+. .+|+.||||+.+......-. ...-.+.
T Consensus 23 ~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~---------------------------------~~~~~~~ 69 (327)
T 3a62_A 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNA---------------------------------KDTAHTK 69 (327)
T ss_dssp EEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC----------------------------------------------
T ss_pred EEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhh---------------------------------hHHHHHH
Confidence 6899999999999997 47999999998754211000 0011234
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++. +...+.+-..+ .....-+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++
T Consensus 70 ~E~~~l~~l~----hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~al~~lH~~~iv 143 (327)
T 3a62_A 70 AERNILEEVK----HPFIVDLIYAF-QTGGKLYLILEYLSGGELFMQLE-REGIFMEDTACFYLAEISMALGHLHQKGII 143 (327)
T ss_dssp -HHHHHHHCC----CTTBCCEEEEE-ECSSCEEEEEECCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCC----CCCccceeEEE-EcCCEEEEEEeCCCCCcHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 5555555542 22222222232 22455689999999999987643 234466666666555555 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+|++|.|||+. .++++|||....
T Consensus 144 H~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 144 YRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp CCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred cccCCHHHeEECCCCcEEEEeCCcccc
Confidence 999999999964 699999997643
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.04 E-value=6.8e-10 Score=130.35 Aligned_cols=137 Identities=20% Similarity=0.133 Sum_probs=95.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+........ . .-.+.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~---------------------------------~~~~~~E~ 58 (319)
T 4euu_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR---P---------------------------------VDVQMREF 58 (319)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS---C---------------------------------HHHHHHHH
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEeccccccc---h---------------------------------HHHHHHHH
Confidence 57999999999999976 69999999986432110 0 00124566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC-ceEEEEeccCCCcCCchhhHhhc--CCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS-TRVLTTEFIDGVKISDKEGLLEK--GFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t-~~VLVME~i~G~~l~d~~~l~~~--~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+.+.+++ +...+.+-.++.+... ..+|||||++|.+|.++..-... +++...+...+.+++ +..+|..|++
T Consensus 59 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~iv 134 (319)
T 4euu_A 59 EVLKKLN----HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134 (319)
T ss_dssp HHHHHCC----CTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHhcC----CCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 6665553 3333333334333322 45899999999999887542222 277777777766666 7889999999
Q ss_pred ccCCCCCCCCC----C---eeEEecCCchh
Q psy12972 563 HADPHSGNDVN----T---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv----~---~v~liDfG~~~ 585 (1578)
|+|++|.|||+ . .++++|||...
T Consensus 135 H~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp CSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred cCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999999996 3 38899999764
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=3.9e-10 Score=133.19 Aligned_cols=135 Identities=18% Similarity=0.129 Sum_probs=93.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+....-... .+-.+.+|+
T Consensus 13 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~~E~ 56 (323)
T 3tki_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD------------------------------------CPENIKKEI 56 (323)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------------------------------------------CHHHHH
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEcccccc------------------------------------hHHHHHHHH
Confidence 67999999999999976 89999999985432110 001235566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++. +...+.+-..+ ...+..+|||||++|.+|.+... ...+++...+...+.+++ +..+|..|++|+|
T Consensus 57 ~~l~~l~----hpnIv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~D 130 (323)
T 3tki_A 57 CINKMLN----HENVVKFYGHR-REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 130 (323)
T ss_dssp HHHHHCC----CTTBCCEEEEE-ECSSEEEEEEECCTTEEGGGGSB-TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHhCC----CCCCCeEEEEE-ecCCeEEEEEEcCCCCcHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence 5555542 32223332332 23345689999999999988743 233577777666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||+|||+. .++++|||...
T Consensus 131 lkp~NIll~~~~~~kl~Dfg~a~ 153 (323)
T 3tki_A 131 IKPENLLLDERDNLKISDFGLAT 153 (323)
T ss_dssp CSGGGEEECTTCCEEECCCTTCE
T ss_pred cchHHEEEeCCCCEEEEEeeccc
Confidence 999999964 59999999764
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.04 E-value=3.6e-10 Score=139.95 Aligned_cols=134 Identities=15% Similarity=0.096 Sum_probs=99.6
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+++.||||+.+++... .-+|.+|++
T Consensus 190 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--------------------------------------~~~~~~E~~ 231 (452)
T 1fmk_A 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--------------------------------------PEAFLQEAQ 231 (452)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEECCTTSSC--------------------------------------HHHHHHHHH
T ss_pred eeecCCCCeEEEEEEECCCceEEEEEeccCCCC--------------------------------------HHHHHHHHH
Confidence 579999999999999988889999998764211 013567777
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.+++ +...+.+-.++.+ ...+|||||++|.+|.++..-. ...++...+...+.+++ +..+|..|++|+|
T Consensus 232 ~l~~l~----hp~iv~~~~~~~~--~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrD 305 (452)
T 1fmk_A 232 VMKKLR----HEKLVQLYAVVSE--EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305 (452)
T ss_dssp HHHHCC----CTTBCCEEEEECS--SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHhCC----CCCEeeEEEEEcC--CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence 777663 3333444344432 4568999999999999875422 23477777777666665 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||++ .++++|||....
T Consensus 306 lkp~Nill~~~~~~kl~DfG~a~~ 329 (452)
T 1fmk_A 306 LRAANILVGENLVCKVADFGLARL 329 (452)
T ss_dssp CSGGGEEECGGGCEEECCCCTTC-
T ss_pred CChhhEEECCCCCEEECCCcccee
Confidence 999999975 589999998643
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=2.8e-10 Score=132.39 Aligned_cols=146 Identities=16% Similarity=0.163 Sum_probs=101.7
Q ss_pred CCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHH
Q psy12972 396 GCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELK 474 (1578)
Q Consensus 396 G~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~ 474 (1578)
...+++.|... +.||.|++|+||+|+.. +|+.||||+..+..... .
T Consensus 17 ~~~~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------~--------- 63 (303)
T 3a7i_A 17 KADPEELFTKL--EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED----------------------E--------- 63 (303)
T ss_dssp EECGGGTEEEE--EEEEECSSSEEEEEEETTTCCEEEEEEEETTTCST----------------------T---------
T ss_pred CCChHHHHHHh--hhhcccCCeEEEEEEECCCCcEEEEEEecccccHH----------------------H---------
Confidence 34566777765 67999999999999864 79999999986542110 0
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--
Q psy12972 475 VPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 475 ~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~-- 552 (1578)
.-++.+|++.+.++ .+...+.+-..+. .....+|||||++|.+|.++. ....++...+...+.+++
T Consensus 64 -----~~~~~~e~~~l~~l----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~qi~~~ 131 (303)
T 3a7i_A 64 -----IEDIQQEITVLSQC----DSPYVTKYYGSYL-KDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKG 131 (303)
T ss_dssp -----HHHHHHHHHHHHHC----CCTTBCCEEEEEE-ETTEEEEEEECCTTEEHHHHH--TTSCCCHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHhC----CCCCEeEEEEEEe-cCCeEEEEEEeCCCCcHHHHH--hcCCCCHHHHHHHHHHHHHH
Confidence 01234555555444 2222222222222 234568999999999998863 456677777777666665
Q ss_pred HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+..+|..|++|+|++|.||++. .++++|||....
T Consensus 132 l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~ 168 (303)
T 3a7i_A 132 LDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQ 168 (303)
T ss_dssp HHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred HHHHHHCCCccCCCChheEEECCCCCEEEeeccccee
Confidence 7889999999999999999964 599999997643
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.04 E-value=4.7e-10 Score=128.08 Aligned_cols=137 Identities=20% Similarity=0.132 Sum_probs=89.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+. .|+.||||+.+.......... . -.+.+|++
T Consensus 13 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~---------------------------~------~~~~~e~~ 58 (271)
T 3dtc_A 13 EIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQT---------------------------I------ENVRQEAK 58 (271)
T ss_dssp EEEEEETTEEEEEEEE-TTEEEEEEEC----------C---------------------------H------HHHHHHHH
T ss_pred eeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHH---------------------------H------HHHHHHHH
Confidence 6799999999999986 489999999865432210000 0 12455665
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC---ccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG---FVH 563 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G---~vH 563 (1578)
.+.+++ +..-+.+-.++ ......+|||||++|.++.++. ....++...+...+.+++ +..+|..| ++|
T Consensus 59 ~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H 131 (271)
T 3dtc_A 59 LFAMLK----HPNIIALRGVC-LKEPNLCLVMEFARGGPLNRVL--SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIH 131 (271)
T ss_dssp HHHHCC----CTTBCCEEEEE-CCC--CEEEEECCTTEEHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCC
T ss_pred HHHhcC----CCCEeeEEEEE-ecCCceEEEEEcCCCCCHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceee
Confidence 555543 32223332332 2234568999999999998763 456778777776666665 78899999 889
Q ss_pred cCCCCCCCCCC-----------eeEEecCCchhh
Q psy12972 564 ADPHSGNDVNT-----------WLYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~-----------~v~liDfG~~~~ 586 (1578)
+|++|.||++. .++++|||....
T Consensus 132 ~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~ 165 (271)
T 3dtc_A 132 RDLKSSNILILQKVENGDLSNKILKITDFGLARE 165 (271)
T ss_dssp SCCSGGGEEESSCCSSSCCSSCCEEECCCCC---
T ss_pred cCCchHHEEEecccccccccCcceEEccCCcccc
Confidence 99999999964 389999997643
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=3.4e-10 Score=131.04 Aligned_cols=132 Identities=20% Similarity=0.241 Sum_probs=94.8
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+. .+|+.||||+....... -.+.+|+
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------------------------------------~~~~~e~ 56 (298)
T 1csn_A 16 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA---------------------------------------PQLRDEY 56 (298)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS---------------------------------------CCHHHHH
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc---------------------------------------HHHHHHH
Confidence 6799999999999995 58999999987532110 0234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+.++.. ++ .+|.++. ......+|||||+ |.+|.++.......++...+...+.+++ +..+|..|++|
T Consensus 57 ~~~~~l~~----~~--~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH 129 (298)
T 1csn_A 57 RTYKLLAG----CT--GIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVY 129 (298)
T ss_dssp HHHHHTTT----CT--TCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHhc----CC--CCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 55555532 22 2333332 2234568999999 9999987554344578887777776666 78899999999
Q ss_pred cCCCCCCCCCC---e-----eEEecCCchhh
Q psy12972 564 ADPHSGNDVNT---W-----LYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~---~-----v~liDfG~~~~ 586 (1578)
+|+||.|||+. . ++++|||....
T Consensus 130 ~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~ 160 (298)
T 1csn_A 130 RDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160 (298)
T ss_dssp CCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred CCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence 99999999974 2 99999997643
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.04 E-value=3.5e-10 Score=136.04 Aligned_cols=138 Identities=19% Similarity=0.163 Sum_probs=96.9
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+.. +|+.||||+.+...... .+.+
T Consensus 77 ~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 120 (367)
T 3l9p_A 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ------------------------------------DELD 120 (367)
T ss_dssp EECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHH------------------------------------HHHH
T ss_pred eEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChh------------------------------------hHHH
Confidence 57999999999999953 57899999875432211 1234
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh------cCCCHHHHHHHHHHHH--HH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE------KGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~------~~~~~~~v~~~l~~~~--l~ 554 (1578)
+.+|+..+.++. +...+.+-.++ ......+|||||++|.+|.++..-.. ..++...+...+.+++ +.
T Consensus 121 ~~~E~~~l~~l~----hpnIv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~ 195 (367)
T 3l9p_A 121 FLMEALIISKFN----HQNIVRCIGVS-LQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 195 (367)
T ss_dssp HHHHHHHHHHCC----CTTBCCEEEEE-CSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC----CCCCCeEEEEE-ecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHH
Confidence 566776666652 33323333333 22345689999999999988754221 2366666666666655 78
Q ss_pred HHHHcCccccCCCCCCCCCC---e---eEEecCCchhhh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT---W---LYPVDLGDKFRL 587 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~---~---v~liDfG~~~~l 587 (1578)
.+|..|++|+|++|.|||+. . ++++|||....+
T Consensus 196 ~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~ 234 (367)
T 3l9p_A 196 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 234 (367)
T ss_dssp HHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred HHHhCCeeCCCCChhhEEEecCCCCceEEECCCcccccc
Confidence 89999999999999999975 3 899999987544
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=99.04 E-value=5.4e-10 Score=133.02 Aligned_cols=137 Identities=14% Similarity=0.073 Sum_probs=92.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+...... .+ . .-.+..|.
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~--~~------------------~--------------~~~~~~E~ 56 (337)
T 1o6l_A 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--KD------------------E--------------VAHTVTES 56 (337)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TT------------------C--------------HHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhh--hh------------------H--------------HHHHHHHH
Confidence 67999999999999975 79999999987532110 00 0 01123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+-..+ .....-+|||||++|..|.+... ....++...+...+.+++ ++.+|..|++|+|
T Consensus 57 ~~l~~l----~hp~iv~l~~~~-~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD 130 (337)
T 1o6l_A 57 RVLQNT----RHPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130 (337)
T ss_dssp HHHHSC----CCTTBCCEEEEE-ECSSEEEEEEECCTTCBHHHHHH-HHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred HHHHhC----CCCcCcceEEEE-EeCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCc
Confidence 554433 222222222222 22345689999999999977643 234567666666555555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 131 lkp~NIll~~~g~vkL~DFG~a~ 153 (337)
T 1o6l_A 131 IKLENLMLDKDGHIKITDFGLCK 153 (337)
T ss_dssp CCGGGEEECTTSCEEECCCTTCB
T ss_pred CCHHHEEECCCCCEEEeeccchh
Confidence 999999964 69999999753
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.04 E-value=3.3e-10 Score=140.25 Aligned_cols=134 Identities=18% Similarity=0.095 Sum_probs=98.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+++.||||+.+++... .-+|.+|++
T Consensus 194 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~--------------------------------------~~~~~~E~~ 235 (454)
T 1qcf_A 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS--------------------------------------VEAFLAEAN 235 (454)
T ss_dssp EEEECCSSEEEEEEEETTTEEEEEEEECTTSBC--------------------------------------HHHHHHHHH
T ss_pred EEcccCCceEEEEEEECCccEEEEEEecCCCcc--------------------------------------HHHHHHHHH
Confidence 689999999999999999999999998764211 013456776
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++ .+...|.+-.++. ....+|||||++|.+|.++..-. ...++...+...+.+++ +..+|..|++|+|
T Consensus 236 ~l~~l----~h~~iv~l~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrD 309 (454)
T 1qcf_A 236 VMKTL----QHDKLVKLHAVVT--KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD 309 (454)
T ss_dssp HHTTC----CCTTBCCEEEEEC--SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred HHhhC----CCCCEeeEEEEEe--CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence 66554 3333344444442 34568999999999999875422 23567666666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 310 lkp~Nill~~~~~~kl~DFG~a~~ 333 (454)
T 1qcf_A 310 LRAANILVSASLVCKIADFGLARV 333 (454)
T ss_dssp CSGGGEEECTTCCEEECSTTGGGG
T ss_pred CCHHHEEECCCCcEEEeeCCCceE
Confidence 999999965 599999998743
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=99.04 E-value=2.7e-10 Score=145.11 Aligned_cols=136 Identities=17% Similarity=0.177 Sum_probs=96.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+....-.. | .-.+.+|+
T Consensus 163 ~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~----~---------------------------------~~~~~~Ei 205 (573)
T 3uto_A 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHES----D---------------------------------KETVRKEI 205 (573)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH----H---------------------------------HHHHHHHH
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEeccchh----h---------------------------------HHHHHHHH
Confidence 57999999999999975 8999999987532110 1 01134566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .|..-|.+-.++.+ ...-+|||||++|..|.+...-....++..++...+.+++ ++.+|..|++|||
T Consensus 206 ~il~~l----~hpnIv~l~~~~~~-~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRD 280 (573)
T 3uto_A 206 QTMSVL----RHPTLVNLHDAFED-DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLD 280 (573)
T ss_dssp HHHHHT----CCTTBCCEEEEEEC-SSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhC----CCCCCCeEEEEEEE-CCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence 666554 33334555555532 3456899999999998776432334567777666666665 7889999999999
Q ss_pred CCCCCCCC-----CeeEEecCCchhh
Q psy12972 566 PHSGNDVN-----TWLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv-----~~v~liDfG~~~~ 586 (1578)
+||.|||+ +.++++|||....
T Consensus 281 lKp~Nill~~~~~~~vKl~DFG~a~~ 306 (573)
T 3uto_A 281 LKPENIMFTTKRSNELKLIDFGLTAH 306 (573)
T ss_dssp CCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred CChhhccccCCCCCCEEEeeccceeE
Confidence 99999996 3589999997644
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.03 E-value=4.2e-10 Score=129.98 Aligned_cols=134 Identities=19% Similarity=0.234 Sum_probs=96.6
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+....... -.+..|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------------------------------------~~~~~e~ 55 (296)
T 4hgt_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---------------------------------------PQLHIES 55 (296)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEC---C---------------------------------------CCHHHHH
T ss_pred eeecCCCCeEEEEEEEcCCCceEEEEeecccccc---------------------------------------hHHHHHH
Confidence 6899999999999996 58999999985432110 0234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +.+.+..-..+.......+|||||+ |.+|.++.......++...+...+.+++ +..+|..|++|+|
T Consensus 56 ~~l~~l~----~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~D 130 (296)
T 4hgt_A 56 KIYKMMQ----GGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRD 130 (296)
T ss_dssp HHHHHHT----TSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHHhc----CCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 5555554 3333333334434445568999999 8899887554456688887777776666 7889999999999
Q ss_pred CCCCCCCC---C---eeEEecCCchhh
Q psy12972 566 PHSGNDVN---T---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv---~---~v~liDfG~~~~ 586 (1578)
++|.|||+ . .++++|||....
T Consensus 131 lkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 131 VKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp CSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred CCHHHeeeeccCCCCeEEEecCcccee
Confidence 99999997 2 489999997643
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.03 E-value=6.3e-10 Score=130.46 Aligned_cols=137 Identities=20% Similarity=0.159 Sum_probs=90.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+......... .+..+..|.
T Consensus 63 ~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~~e~ 107 (311)
T 3p1a_A 63 SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPK-----------------------------------DRARKLAEV 107 (311)
T ss_dssp EEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHH-----------------------------------HHHHHHHHH
T ss_pred heeccCCCeEEEEEEECCCCeEEEEEEecccccChH-----------------------------------HHHHHHHHH
Confidence 57999999999999976 899999998754322110 011112233
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.+. ..+...+.+-..+ ......+|||||+.| ++.+........++...+...+.+++ +..+|..|++|+|
T Consensus 108 ~~~~~~---~~h~~iv~l~~~~-~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~D 182 (311)
T 3p1a_A 108 GSHEKV---GQHPCCVRLEQAW-EEGGILYLQTELCGP-SLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLD 182 (311)
T ss_dssp HHHHHH---CCCTTBCCEEEEE-EETTEEEEEEECCCC-BHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHHh---cCCCcEEEEEEEE-EeCCEEEEEEeccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence 333222 2222223333333 234556899999944 66665433344577777766666665 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 183 ikp~NIll~~~~~~kl~DFG~a~ 205 (311)
T 3p1a_A 183 VKPANIFLGPRGRCKLGDFGLLV 205 (311)
T ss_dssp CSGGGEEECGGGCEEECCCTTCE
T ss_pred CCHHHEEECCCCCEEEccceeee
Confidence 999999975 59999999753
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.03 E-value=4.2e-10 Score=132.79 Aligned_cols=134 Identities=12% Similarity=0.100 Sum_probs=95.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||+|+....-.. +-.+.+|+
T Consensus 11 ~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~--------------------------------------~~~~~~E~ 52 (321)
T 1tki_A 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD--------------------------------------QVLVKKEI 52 (321)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCTHH--------------------------------------HHHHHHHH
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEEecCccc--------------------------------------HHHHHHHH
Confidence 57999999999999965 7999999987632110 11245566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+-.++. ....-+|||||++|.+|.+...-....++...+...+.+++ +..+|..|++|+|
T Consensus 53 ~~l~~l~----hpnIv~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~D 127 (321)
T 1tki_A 53 SILNIAR----HRNILHLHESFE-SMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFD 127 (321)
T ss_dssp HHHHHSC----CTTBCCEEEEEE-ETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhCC----CCCCCeEeEEEe-cCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCC
Confidence 6665542 333333333332 23456899999999999876432223577777777666666 7889999999999
Q ss_pred CCCCCCCCC-----eeEEecCCchh
Q psy12972 566 PHSGNDVNT-----WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~-----~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 128 lkp~NIl~~~~~~~~~kl~Dfg~a~ 152 (321)
T 1tki_A 128 IRPENIIYQTRRSSTIKIIEFGQAR 152 (321)
T ss_dssp CCGGGEEESSSSCCCEEECCCTTCE
T ss_pred CCHHHEEEccCCCCCEEEEECCCCe
Confidence 999999964 48999999764
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.03 E-value=4.1e-10 Score=136.64 Aligned_cols=136 Identities=19% Similarity=0.188 Sum_probs=96.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||+|+....... + +..+.+|+
T Consensus 57 ~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~----~---------------------------------~~~~~~E~ 99 (387)
T 1kob_A 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL----D---------------------------------KYTVKNEI 99 (387)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH----H---------------------------------HHHHHHHH
T ss_pred EEEecCCCEEEEEEEECCCCCEEEEEEecccchh----h---------------------------------HHHHHHHH
Confidence 57999999999999975 7999999998643211 0 01234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+-.++. ....-+|||||++|.+|.+........++...+...+.+++ +..+|..|++|+|
T Consensus 100 ~il~~l----~hpnIv~~~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrD 174 (387)
T 1kob_A 100 SIMNQL----HHPKLINLHDAFE-DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLD 174 (387)
T ss_dssp HHHTTC----CSTTBCCEEEEEE-CSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhC----CCcCCCeEEEEEE-eCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence 555444 2333333333332 23556899999999999876443334577777777766666 7889999999999
Q ss_pred CCCCCCCCC-----eeEEecCCchhh
Q psy12972 566 PHSGNDVNT-----WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~-----~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 175 lkp~NIll~~~~~~~vkL~DFG~a~~ 200 (387)
T 1kob_A 175 IKPENIMCETKKASSVKIIDFGLATK 200 (387)
T ss_dssp CCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred cchHHeEEecCCCCceEEEeccccee
Confidence 999999973 489999997643
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.03 E-value=2.2e-10 Score=137.45 Aligned_cols=144 Identities=20% Similarity=0.224 Sum_probs=93.2
Q ss_pred cccccccceEEEEEEecC------CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTKE------GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~------G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+.++ |+.||||+...... ....++..++.+.. ..
T Consensus 41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~e~~~~~~~~~-------------------------~~ 94 (364)
T 3op5_A 41 LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG-PLFTELKFYQRAAK-------------------------PE 94 (364)
T ss_dssp EECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCH-HHHHHHHHHHHHCC-------------------------HH
T ss_pred EEEecCCCeEEEEeeecCccccccccceEEEEeeccch-hHHHHHHHHHhhhh-------------------------hH
Confidence 689999999999999764 58999999876532 12222222211100 01
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCC------CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKS------STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~------t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~ 554 (1578)
+..|...+. .+.+. .|++++.... ...+|||||+ |.+|.++.......++...+...+.+++ +.
T Consensus 95 ~~~e~~~~~----~l~h~---~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~ 166 (364)
T 3op5_A 95 QIQKWIRTR----KLKYL---GVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILE 166 (364)
T ss_dssp HHHHHHHHT----TCSCC---CSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh----hccCC---CCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHH
Confidence 112222221 12222 2333332211 2258999999 9999987554345688888777777766 88
Q ss_pred HHHHcCccccCCCCCCCCCC-----eeEEecCCchhh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT-----WLYPVDLGDKFR 586 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~-----~v~liDfG~~~~ 586 (1578)
.+|..|++|+|++|.|||+. .++++|||....
T Consensus 167 ~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~ 203 (364)
T 3op5_A 167 YIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYR 203 (364)
T ss_dssp HHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEE
T ss_pred HHHHCCeEEecCCHHHEEEecCCCCeEEEEECCccee
Confidence 99999999999999999974 489999998743
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=4.8e-10 Score=129.05 Aligned_cols=136 Identities=15% Similarity=0.106 Sum_probs=91.3
Q ss_pred cccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|+.. .+..||||+.+....... .-.+.
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~ 64 (281)
T 1mp8_A 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV------------------------------------REKFL 64 (281)
T ss_dssp EEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHH------------------------------------HHHHH
T ss_pred eEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHH------------------------------------HHHHH
Confidence 68999999999999875 356799998764321110 01245
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++ .+..-+.+-.++ .....+|||||++|.+|.++.......++...+...+.+++ +..+|..|++
T Consensus 65 ~e~~~l~~l----~h~~iv~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 138 (281)
T 1mp8_A 65 QEALTMRQF----DHPHIVKLIGVI--TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV 138 (281)
T ss_dssp HHHHHHHTC----CCTTBCCEEEEE--CSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhC----CCCccceEEEEE--ccCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 566666554 233223333333 22456899999999999887544444577777776666655 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+|+||.|||+. .++++|||....
T Consensus 139 H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 139 HRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp CSCCSGGGEEEEETTEEEECC------
T ss_pred cccccHHHEEECCCCCEEECccccccc
Confidence 999999999965 599999997643
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=2.9e-10 Score=133.20 Aligned_cols=139 Identities=22% Similarity=0.213 Sum_probs=93.2
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+. .+|+.||||+.+......- +. ...|.+|+
T Consensus 18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------------------------~~------~~~~~~E~ 63 (311)
T 3ork_A 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDP----------------------------SF------YLRFRREA 63 (311)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSH----------------------------HH------HHHHHHHH
T ss_pred EEEccCCCEEEEEEEECCCCceEEEEEeCccccCCH----------------------------HH------HHHHHHHH
Confidence 6899999999999995 5899999999876432210 00 01234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC---ceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS---TRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t---~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+.+.++ .+..-+.+-..+..... ..+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|++
T Consensus 64 ~~l~~l----~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 138 (311)
T 3ork_A 64 QNAAAL----NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEGPMTPKRAIEVIADACQALNFSHQNGII 138 (311)
T ss_dssp TTCCCC----CCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHcC----CCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 444433 22222222222211111 1289999999999988754 234577777766666665 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+|+||.|||+. .++++|||....
T Consensus 139 H~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 139 HRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp CCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 999999999964 599999997643
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=2.9e-10 Score=133.71 Aligned_cols=136 Identities=15% Similarity=0.137 Sum_probs=93.3
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+|+.||||+.++..... .+..+.+|++
T Consensus 36 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~~e~~ 79 (326)
T 3uim_A 36 NILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG------------------------------------GELQFQTEVE 79 (326)
T ss_dssp TEEECCSSSEEEEECCSSSCCEEEEECCC-----------------------------------------CCCHHHHHHH
T ss_pred eeEecCCCcEEEEEEecCCCEEEEEEeccccCch------------------------------------HHHHHHHHHH
Confidence 6899999999999998899999999986542110 0112455555
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh---hcCCCHHHHHHHHHHHH--HHHHHHc---C
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL---EKGFSLADVDRKLFTAF--AEQIFQT---G 560 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~---~~~~~~~~v~~~l~~~~--l~~i~~~---G 560 (1578)
.+.++ .+..-+.+-.++ ...+..+|||||++|.+|.++..-. ...++...+...+.+++ +..+|.. |
T Consensus 80 ~l~~l----~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ 154 (326)
T 3uim_A 80 MISMA----VHRNLLRLRGFC-MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK 154 (326)
T ss_dssp GGGTC----CCTTBCCCCEEE-CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC
T ss_pred HHHhc----cCCCccceEEEE-ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 54433 222223333333 2345668999999999998874321 11266666666665555 7889999 9
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.|||+. .++++|||...
T Consensus 155 ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~ 182 (326)
T 3uim_A 155 IIHRDVKAANILLDEEFEAVVGDFGLAK 182 (326)
T ss_dssp EECCCCSGGGEEECTTCCEEECCCSSCE
T ss_pred eEeCCCchhhEEECCCCCEEeccCcccc
Confidence 99999999999965 59999999764
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=99.02 E-value=4.3e-10 Score=134.54 Aligned_cols=137 Identities=15% Similarity=0.089 Sum_probs=92.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.++...... -. .-.+.+|.
T Consensus 47 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--------------------~~--------------~~~~~~E~ 92 (350)
T 1rdq_E 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL--------------------KQ--------------IEHTLNEK 92 (350)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHT--------------------TC--------------HHHHHHHH
T ss_pred EEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccH--------------------HH--------------HHHHHHHH
Confidence 68999999999999975 799999999865321100 00 01123444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+-..+. -...-+|||||++|.+|.+... ....++...+...+.+++ ++.+|..|++|+|
T Consensus 93 ~~l~~l----~hp~iv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD 166 (350)
T 1rdq_E 93 RILQAV----NFPFLVKLEFSFK-DNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166 (350)
T ss_dssp HHHTTC----CCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhC----CCCCCCeEEEEEE-cCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence 444333 2222222222222 2345689999999999987643 234577777666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 167 lkp~NIll~~~g~~kL~DFg~a~ 189 (350)
T 1rdq_E 167 LKPENLLIDQQGYIQVTDFGFAK 189 (350)
T ss_dssp CSGGGEEECTTSCEEECCCTTCE
T ss_pred CccceEEECCCCCEEEcccccce
Confidence 999999964 59999999764
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.02 E-value=4e-10 Score=140.65 Aligned_cols=134 Identities=18% Similarity=0.214 Sum_probs=98.1
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+....... -++..|+
T Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~---------------------------------------~~~~~E~ 53 (483)
T 3sv0_A 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---------------------------------------PQLLYES 53 (483)
T ss_dssp CCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS---------------------------------------CCHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCcEEEEEEecccccc---------------------------------------HHHHHHH
Confidence 6799999999999995 58999999986532110 0134455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +.+.+..-..+.......+|||||+ |.+|.++.......++...+...+.+++ +..+|..|++|+|
T Consensus 54 ~il~~L~----~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrD 128 (483)
T 3sv0_A 54 KIYRILQ----GGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRD 128 (483)
T ss_dssp HHHHHTT----TSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHHhc----CCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence 5555543 3333333344444455678999999 8899988654456788888877777766 8899999999999
Q ss_pred CCCCCCCCC------eeEEecCCchhh
Q psy12972 566 PHSGNDVNT------WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~------~v~liDfG~~~~ 586 (1578)
+||.|||++ .++++|||....
T Consensus 129 IKP~NILl~~~~~~~~vkL~DFGla~~ 155 (483)
T 3sv0_A 129 IKPDNFLMGLGRRANQVYIIDFGLAKK 155 (483)
T ss_dssp CCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred cCcceEEEecCCCCCeEEEEeCCccee
Confidence 999999973 499999997643
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=99.02 E-value=3.1e-10 Score=131.33 Aligned_cols=137 Identities=16% Similarity=0.152 Sum_probs=93.6
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|+||+|+..+|+.||||+.+...... .. . -.+.+|++
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~--------------------~~---------~------~~~~~E~~ 52 (288)
T 1ob3_A 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDE--------------------GI---------P------STTIREIS 52 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGGG--------------------CC---------C------HHHHHHHH
T ss_pred hhcccCCCEEEEEEEcCCCCEEEEEEEecccccc--------------------cc---------c------hhHHHHHH
Confidence 5799999999999999889999999986542210 00 0 01234444
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++ .+..-+.+-.++. ....-+|||||++| .+.+.......+++...+...+.+++ +..+|..|++|+|+
T Consensus 53 ~l~~l----~h~~iv~~~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl 126 (288)
T 1ob3_A 53 ILKEL----KHSNIVKLYDVIH-TKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL 126 (288)
T ss_dssp GGGGC----CCTTBCCEEEEEE-CSSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred HHHhc----CCCCEeeeeeEEc-cCCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 44443 2332233333332 23456899999987 66665433345677776666666655 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchhh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~~ 586 (1578)
+|.|||+. .++++|||....
T Consensus 127 kp~Nil~~~~~~~kl~Dfg~~~~ 149 (288)
T 1ob3_A 127 KPQNLLINREGELKIADFGLARA 149 (288)
T ss_dssp CGGGEEECTTSCEEECCTTHHHH
T ss_pred CHHHEEEcCCCCEEEeECccccc
Confidence 99999964 699999997644
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.02 E-value=7.3e-10 Score=130.42 Aligned_cols=130 Identities=17% Similarity=0.184 Sum_probs=93.5
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+..+.... ++.+|+
T Consensus 42 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----------------------------------------~~~~E~ 81 (330)
T 3nsz_A 42 RKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK----------------------------------------KIKREI 81 (330)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSCCHH----------------------------------------HHHHHH
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEecccchH----------------------------------------HHHHHH
Confidence 6899999999999985 58999999998754321 134566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.+++. +...+.+-.++.+- ....+|||||++|..+.++. ..++...+...+.+++ +..+|..|++|+
T Consensus 82 ~~l~~l~~---~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~ 154 (330)
T 3nsz_A 82 KILENLRG---GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHSMGIMHR 154 (330)
T ss_dssp HHHHHHTT---STTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHcCC---CCCEEEeeeeeccCCCCceEEEEeccCchhHHHHH----HhCCHHHHHHHHHHHHHHHHHHHhCCeeeC
Confidence 66665541 22223333444332 34458999999999887763 2366666666666655 788999999999
Q ss_pred CCCCCCCCCC----eeEEecCCchh
Q psy12972 565 DPHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~----~v~liDfG~~~ 585 (1578)
|++|.|||+. .++++|||...
T Consensus 155 Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 155 DVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp CCSGGGEEEETTTTEEEECCCTTCE
T ss_pred CCCHHHEEEcCCCCEEEEEeCCCce
Confidence 9999999964 58999999763
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.02 E-value=5.7e-10 Score=128.06 Aligned_cols=133 Identities=15% Similarity=0.111 Sum_probs=97.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|+||+|+..+++.||||+.+++.... -.+.+|++
T Consensus 19 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 60 (279)
T 1qpc_A 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP--------------------------------------DAFLAEAN 60 (279)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTSSCH--------------------------------------HHHHHHHH
T ss_pred eeecCCCCeEEEEEEEcCCcEEEEEEecCCcccH--------------------------------------HHHHHHHH
Confidence 6799999999999999889999999986532110 02456666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++. +...+.+-.++. ....++||||++|.+|.++.... ...++...+...+.+++ +..+|..|++|+|
T Consensus 61 ~l~~l~----h~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d 134 (279)
T 1qpc_A 61 LMKQLQ----HQRLVRLYAVVT--QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134 (279)
T ss_dssp HHHHCC----CTTBCCEEEEEC--SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHhCC----CcCcceEEEEEc--CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 666653 333333334432 34568999999999998874322 22577777776666665 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 135 ikp~Nil~~~~~~~kl~Dfg~~~ 157 (279)
T 1qpc_A 135 LRAANILVSDTLSCKIADFGLAR 157 (279)
T ss_dssp CSGGGEEECTTSCEEECCCTTCE
T ss_pred CCHhhEEEcCCCCEEECCCcccc
Confidence 999999964 58999999764
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=7.2e-10 Score=130.06 Aligned_cols=136 Identities=18% Similarity=0.138 Sum_probs=92.1
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+. +|+.||||+........ . ..-.|.+|++
T Consensus 43 ~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~------------------------~-----------~~~~~~~E~~ 86 (309)
T 3p86_A 43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHA------------------------E-----------RVNEFLREVA 86 (309)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSH------------------------H-----------HHHHHHHHHH
T ss_pred eEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCH------------------------H-----------HHHHHHHHHH
Confidence 6899999999999976 78999999986432110 0 0012456777
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh--cCCCHHHHHHHHHHHH--HHHHHHcC--cc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE--KGFSLADVDRKLFTAF--AEQIFQTG--FV 562 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~--~~~~~~~v~~~l~~~~--l~~i~~~G--~v 562 (1578)
.+.+++ +...+.+-..+ ......+|||||++|.+|.++..... ..++...+...+.+++ +..+|..| ++
T Consensus 87 ~l~~l~----hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~iv 161 (309)
T 3p86_A 87 IMKRLR----HPNIVLFMGAV-TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161 (309)
T ss_dssp HHHHCC----CTTBCCEEEEE-CSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCC
T ss_pred HHHhCC----CCCEeeEEEEE-EECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEE
Confidence 776663 22222222222 22344689999999999988743111 1266666666666655 78899999 99
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.|||+. .++++|||...
T Consensus 162 H~Dikp~NIll~~~~~~kL~Dfg~a~ 187 (309)
T 3p86_A 162 HRNLKSPNLLVDKKYTVKVCDFGLSR 187 (309)
T ss_dssp CTTCCGGGEEECTTCCEEECCCC---
T ss_pred CCCCChhhEEEeCCCcEEECCCCCCc
Confidence 999999999965 59999999763
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.02 E-value=5.7e-10 Score=128.89 Aligned_cols=136 Identities=15% Similarity=0.165 Sum_probs=97.0
Q ss_pred cccccccceEEEEEEec---CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 409 NPIAAASLAQVFRAVTK---EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~---~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
+.||.|++|+||+|+.+ +|+.||||+.++..... + .-.+.+
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~---~---------------------------------~~~~~~ 59 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA---D---------------------------------TEEMMR 59 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHH---H---------------------------------HHHHHH
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchh---H---------------------------------HHHHHH
Confidence 48999999999999854 68899999987642211 0 012455
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
|++.+.++. +...+.+-.++ .....++||||++|.+|.++..-....++...+...+.+++ +..+|..|++|
T Consensus 60 E~~~l~~l~----h~~i~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 133 (287)
T 1u59_A 60 EAQIMHQLD----NPYIVRLIGVC--QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 133 (287)
T ss_dssp HHHHHHHCC----CTTBCCEEEEE--ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHhCC----CCCEeEEEEEe--cCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 666666552 32223333333 23456899999999999887533334577777777666665 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchhh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|++|.||++. .++++|||....
T Consensus 134 ~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 134 RDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp CCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred CCCchheEEEcCCCCEEECcccceee
Confidence 99999999964 599999997643
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.02 E-value=6.3e-10 Score=136.13 Aligned_cols=138 Identities=14% Similarity=0.104 Sum_probs=93.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+..-... . . ..-.++.|.
T Consensus 67 ~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~--~------------~--------------------~~~~~~~E~ 112 (412)
T 2vd5_A 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLK--R------------G--------------------EVSCFREER 112 (412)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH--H------------G--------------------GGCCHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhh--H------------H--------------------HHHHHHHHH
Confidence 68999999999999975 79999999986421100 0 0 001134454
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++ +++. +.+-..+. -...-+|||||++|.+|.++..-....++...+...+.+++ ++.+|..|++||
T Consensus 113 ~il~~~-----~hp~Iv~l~~~~~-~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHr 186 (412)
T 2vd5_A 113 DVLVNG-----DRRWITQLHFAFQ-DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHR 186 (412)
T ss_dssp HHHHHS-----CTTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHhc-----CCCCeeeEEEEEe-eCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 444433 2232 22222222 23445799999999999887543334577766655555555 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+||.|||+. .++++|||....
T Consensus 187 DLKp~NILld~~g~vkL~DFGla~~ 211 (412)
T 2vd5_A 187 DIKPDNILLDRCGHIRLADFGSCLK 211 (412)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEE
T ss_pred ccCHHHeeecCCCCEEEeechhhee
Confidence 9999999964 599999997643
|
| >3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP} | Back alignment and structure |
|---|
Probab=99.02 E-value=7.6e-11 Score=116.42 Aligned_cols=77 Identities=18% Similarity=0.303 Sum_probs=65.0
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc------cchhhHhHcCccccCCcEEEEcCCccccccC
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH------NEQGLARRLGVGSQLPQIALLTDGRTSFFKE 946 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~------~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~ 946 (1578)
.++.+|.||||||++|+.+.|.|+++++.++ .|||+ .++++|++|+|.+ +||+++ +|+. +.
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~-------~v~~~~~~~~~~~~~l~~~~~V~~-~PT~~i--~G~~---~~ 78 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP-------YVECSPNGPGTPQAQECTEAGITS-YPTWII--NGRT---YT 78 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC-------EEESCTTCTTSCCCHHHHHTTCCS-SSEEEE--TTEE---EE
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC-------EEEEecccccchhHHHHHHcCCeE-eCEEEE--CCEE---ec
Confidence 4566899999999999999999999997764 56777 6789999999998 999877 7763 55
Q ss_pred CCCCHHHHHHHHHhhC
Q psy12972 947 PSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 947 G~~s~~~L~~fi~~~l 962 (1578)
|.++.++|.+|+.-..
T Consensus 79 G~~~~~~l~~~~~~~~ 94 (106)
T 3kp8_A 79 GVRSLEALAVASGYPL 94 (106)
T ss_dssp SCCCHHHHHHHHTCCC
T ss_pred CCCCHHHHHHHhCCcc
Confidence 9999999999985443
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.02 E-value=6e-10 Score=137.82 Aligned_cols=133 Identities=18% Similarity=0.142 Sum_probs=96.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+.. |+.||||+.+.+... -+|.+|++
T Consensus 199 ~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~~~---------------------------------------~~~~~E~~ 238 (450)
T 1k9a_A 199 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA---------------------------------------QAFLAEAS 238 (450)
T ss_dssp EEEEECSSEEEEEEEET-TEEEEEEEESSCTTS---------------------------------------HHHHHHHH
T ss_pred eeecCcCCeeEEEEEec-CCeEEEEEeCCchHH---------------------------------------HHHHHHHH
Confidence 68999999999999874 889999998753210 12456776
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhc-CCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEK-GFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~-~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++ .+...+.+-.++.+-...-+|||||++|.+|.++..-... .++...+...+.++. +..+|..|++|+|
T Consensus 239 ~l~~l----~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrD 314 (450)
T 1k9a_A 239 VMTQL----RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 314 (450)
T ss_dssp HHHTC----CCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHhc----cCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence 66655 3333344444444433456899999999999887543222 256666666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 315 lkp~Nill~~~~~~kl~DfG~a~ 337 (450)
T 1k9a_A 315 LAARNVLVSEDNVAKVSDFGLTK 337 (450)
T ss_dssp CCGGGEEECTTSCEEECCCTTCE
T ss_pred CCHhhEEECCCCCEEEeeCCCcc
Confidence 999999975 59999999764
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=1.7e-10 Score=133.10 Aligned_cols=140 Identities=16% Similarity=0.064 Sum_probs=96.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+..-...-.... . . --.+.+|+
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~----------~-------------~-------~~~~~~E~ 74 (287)
T 4f0f_A 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI----------E-------------K-------FQEFQREV 74 (287)
T ss_dssp EECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHH----------C-------------C-------SHHHHHHH
T ss_pred hccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHH----------H-------------H-------HHHHHHHH
Confidence 67999999999999974 8999999998654322100000 0 0 01234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC--ccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG--FVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G--~vH 563 (1578)
+.+.++. + + .|++++.-+.+...|||||++|.+|.+...-....++...+...+.+++ +..+|..| ++|
T Consensus 75 ~~l~~l~----h-~--~i~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH 147 (287)
T 4f0f_A 75 FIMSNLN----H-P--NIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVH 147 (287)
T ss_dssp HHHTTCC----C-T--TBCCEEEEETTTTEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBC
T ss_pred HHHHhCC----C-C--CchhhheeecCCCeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeec
Confidence 5555542 2 2 2344444445566899999999998776433344577777766666665 78899999 999
Q ss_pred cCCCCCCCCCC---e-----eEEecCCchh
Q psy12972 564 ADPHSGNDVNT---W-----LYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~-----v~liDfG~~~ 585 (1578)
+|++|.|||+. . ++++|||...
T Consensus 148 ~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~ 177 (287)
T 4f0f_A 148 RDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177 (287)
T ss_dssp SCCSGGGEEESCCCTTCSCCEEECCCTTCB
T ss_pred CCCCcceEEEeccCCCCceeEEeCCCCccc
Confidence 99999999974 2 8999999764
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.01 E-value=4.2e-10 Score=130.40 Aligned_cols=137 Identities=15% Similarity=0.052 Sum_probs=95.7
Q ss_pred cccccccceEEEEEEe-----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVT-----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|.||+|+. .+|+.||||+.+...... .-+|
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------------------------------~~~~ 58 (295)
T 3ugc_A 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH-------------------------------------LRDF 58 (295)
T ss_dssp EEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHH-------------------------------------HHHH
T ss_pred heeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHH-------------------------------------HHHH
Confidence 6799999999999984 378999999986532211 0124
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|++.+.+++ +...+.+-.++... ...-+|||||++|.+|.++.......++...+...+.+++ +..+|..|
T Consensus 59 ~~E~~~l~~l~----h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 134 (295)
T 3ugc_A 59 EREIEILKSLQ----HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134 (295)
T ss_dssp HHHHHHHHTCC----CTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCC----CCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCC
Confidence 56666665553 32223332332111 1234799999999999987544344577777776666665 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|+||.|||+. .++++|||....
T Consensus 135 ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 135 YIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp CCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred cccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 99999999999965 599999997643
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=5.6e-10 Score=133.76 Aligned_cols=137 Identities=15% Similarity=0.069 Sum_probs=91.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+...... .+ .. -.+..|.
T Consensus 26 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~--~~------------------~~--------------~~~~~E~ 71 (353)
T 2i0e_A 26 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ--DD------------------DV--------------ECTMVEK 71 (353)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHH--TT------------------CH--------------HHHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhc--ch------------------HH--------------HHHHHHH
Confidence 68999999999999976 58999999987542110 00 00 0112333
Q ss_pred HHHHHHHHhhCCCCCee-ecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVY-IPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~-vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+..+ .+++.|. +-..+ .....-+|||||++|.+|.+... ....++...+...+.+++ ++.+|..|++|+
T Consensus 72 ~~l~~~----~~hp~iv~l~~~~-~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~givHr 145 (353)
T 2i0e_A 72 RVLALP----GKPPFLTQLHSCF-QTMDRLYFVMEYVNGGDLMYHIQ-QVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYR 145 (353)
T ss_dssp HHHTCT----TCCTTBCCEEEEE-ECSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC
T ss_pred HHHHhc----CCCCEEeeEEEEE-EcCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEec
Confidence 333222 2334322 22222 22345689999999999987643 234577776666666655 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+||.|||+. .++++|||...
T Consensus 146 Dlkp~NIll~~~g~vkL~DFG~a~ 169 (353)
T 2i0e_A 146 DLKLDNVMLDSEGHIKIADFGMCK 169 (353)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCB
T ss_pred cCCHHHEEEcCCCcEEEEeCCccc
Confidence 9999999964 59999999764
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.01 E-value=5e-10 Score=141.68 Aligned_cols=134 Identities=15% Similarity=0.096 Sum_probs=100.3
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+++.||||+.+++... .-+|.+|++
T Consensus 273 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--------------------------------------~~~~~~E~~ 314 (535)
T 2h8h_A 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--------------------------------------PEAFLQEAQ 314 (535)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECTTSSC--------------------------------------HHHHHHHHH
T ss_pred eecccCCCeEEEEEEECCCceEEEEEeCCCCCC--------------------------------------HHHHHHHHH
Confidence 579999999999999988889999998764311 013567777
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.+++ +...|.+-.++.+ ...+|||||++|.+|.++..-. ...++...+...+.+++ +..+|..|++|+|
T Consensus 315 ~l~~l~----hpniv~~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrD 388 (535)
T 2h8h_A 315 VMKKLR----HEKLVQLYAVVSE--EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 388 (535)
T ss_dssp HHHHCC----CTTBCCEEEEECS--SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHhCC----CCCEeeEEEEEee--ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence 777663 3333444444432 4568999999999999875422 23477777777776666 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||++ .++++|||....
T Consensus 389 lkp~NIll~~~~~~kl~DFG~a~~ 412 (535)
T 2h8h_A 389 LRAANILVGENLVCKVADFGLARL 412 (535)
T ss_dssp CSGGGEEECGGGCEEECCTTSTTT
T ss_pred CCHhhEEEcCCCcEEEccccccee
Confidence 999999975 589999998643
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=6.6e-10 Score=130.62 Aligned_cols=135 Identities=16% Similarity=0.075 Sum_probs=97.0
Q ss_pred cccccccceEEEEEEec-----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTK-----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+...... ..-.+
T Consensus 37 ~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~ 80 (318)
T 3lxp_A 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQ------------------------------------HRSGW 80 (318)
T ss_dssp EEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHH------------------------------------HHHHH
T ss_pred heecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChH------------------------------------HHHHH
Confidence 68999999999888643 78999999987543211 01124
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|++.+.+++ +...+.+-.++.+.. ..-+|||||++|.+|.++ +...+++...+...+.+++ +..+|..|
T Consensus 81 ~~E~~~l~~l~----h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~--l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ 154 (318)
T 3lxp_A 81 KQEIDILRTLY----HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDY--LPRHSIGLAQLLLFAQQICEGMAYLHAQH 154 (318)
T ss_dssp HHHHHHHHHCC----CTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHH--GGGSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCC----CcchhhEEEEEecCCCceEEEEEecccCCcHHHH--HhhCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 55666666653 333334434443322 334799999999999887 3456688887777766666 78999999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.||++. .++++|||...
T Consensus 155 ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 155 YIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp EECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred ccCCCCchheEEEcCCCCEEECCccccc
Confidence 99999999999965 58999999764
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=8.3e-10 Score=128.70 Aligned_cols=137 Identities=14% Similarity=0.072 Sum_probs=96.7
Q ss_pred cccccccceEEEEEEe------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVT------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+. .+|+.||||+.++..... ..-.
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 72 (313)
T 1t46_A 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT------------------------------------EREA 72 (313)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHH------------------------------------HHHH
T ss_pred HhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHH------------------------------------HHHH
Confidence 6899999999999985 367899999987643210 0113
Q ss_pred HHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhc-----------------CCCHHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEK-----------------GFSLADV 544 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~-----------------~~~~~~v 544 (1578)
+.+|++.+.++. .++. +.+-..+ ......+|||||++|.+|.++...... .++...+
T Consensus 73 ~~~E~~~l~~l~----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (313)
T 1t46_A 73 LMSELKVLSYLG----NHMNIVNLLGAC-TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147 (313)
T ss_dssp HHHHHHHHHHHC----CCTTBCCEEEEE-CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHH
T ss_pred HHHHHHHHhhcc----cCCCeeeEEEEE-ecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHH
Confidence 466777776662 2332 2222222 234566899999999999887542221 3677777
Q ss_pred HHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 545 DRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 545 ~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
...+.+++ +..+|..|++|+|++|.||++. .++++|||....
T Consensus 148 ~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 194 (313)
T 1t46_A 148 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARD 194 (313)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSC
T ss_pred HHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEcccccccc
Confidence 77666665 7889999999999999999964 589999997643
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.01 E-value=9.7e-10 Score=132.83 Aligned_cols=137 Identities=18% Similarity=0.155 Sum_probs=95.5
Q ss_pred cccccccceEEEEEEec--------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK--------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQE 480 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 480 (1578)
+.||.|++|.||+|+.. +++.||||+.+...... + .
T Consensus 75 ~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~---~---------------------------------~ 118 (382)
T 3tt0_A 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK---D---------------------------------L 118 (382)
T ss_dssp EEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHH---H---------------------------------H
T ss_pred eEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHH---H---------------------------------H
Confidence 68999999999999852 34689999987653211 0 0
Q ss_pred HhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------cCCCHHHHH
Q psy12972 481 LDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------------KGFSLADVD 545 (1578)
Q Consensus 481 lDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------------~~~~~~~v~ 545 (1578)
-++.+|++.+.++. .+...+.+-..+ ......+|||||++|.+|.++..... ..++...+.
T Consensus 119 ~~~~~E~~~l~~l~---~hpnIv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 194 (382)
T 3tt0_A 119 SDLISEMEMMKMIG---KHKNIINLLGAC-TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194 (382)
T ss_dssp HHHHHHHHHHHHHC---CCTTBCCEEEEE-CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHH
T ss_pred HHHHHHHHHHHHhc---CCchhhhheeee-ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHH
Confidence 13456666666663 122223332332 22345689999999999988754221 236777777
Q ss_pred HHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 546 RKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 546 ~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
..+.+++ +..+|..|++|+|++|.|||+. .++++|||...
T Consensus 195 ~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~ 239 (382)
T 3tt0_A 195 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239 (382)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCC
T ss_pred HHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCccc
Confidence 7666666 7889999999999999999965 59999999764
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.00 E-value=6.4e-10 Score=131.22 Aligned_cols=137 Identities=12% Similarity=0.066 Sum_probs=91.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+........ . .-.+..|.
T Consensus 12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~--------------------~--------------~~~~~~E~ 57 (318)
T 1fot_A 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLK--------------------Q--------------VEHTNDER 57 (318)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTT--------------------C--------------HHHHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhh--------------------H--------------HHHHHHHH
Confidence 67999999999999975 7999999998754221000 0 00123444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++ .+..-+.+-..+. -...-+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 58 ~~l~~l----~hp~Iv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD 131 (318)
T 1fot_A 58 LMLSIV----THPFIIRMWGTFQ-DAQQIFMIMDYIEGGELFSLLR-KSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRD 131 (318)
T ss_dssp HHHHSC----CBTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHH-HTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred HHHhhC----CCCCCceEeEEEE-eCCEEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 444332 2222233323332 2345679999999999988743 234566666555555554 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 132 lkp~NIll~~~g~~kL~Dfg~a~ 154 (318)
T 1fot_A 132 LKPENILLDKNGHIKITDFGFAK 154 (318)
T ss_dssp CCGGGEEECTTSCEEECCCSSCE
T ss_pred CChheEEEcCCCCEEEeecCcce
Confidence 999999964 69999999764
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=5.7e-10 Score=132.99 Aligned_cols=137 Identities=16% Similarity=0.075 Sum_probs=95.0
Q ss_pred cccccccceEEEEEEe------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVT------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+. .+|+.||||+.+...... ..-.
T Consensus 28 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 71 (359)
T 3vhe_A 28 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS------------------------------------EHRA 71 (359)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHH------------------------------------HHHH
T ss_pred eeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHH------------------------------------HHHH
Confidence 6899999999999973 367899999987543211 0113
Q ss_pred HHHHHHHHHHHHHhhCCCC-CeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhc------------------------
Q psy12972 483 FLNEGRNAERCSKDLAHLP-YVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEK------------------------ 537 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~-~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~------------------------ 537 (1578)
+.+|++.+.++. +++ .+.+-..+.+-...-++||||++|.+|.++......
T Consensus 72 ~~~E~~~l~~l~----~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (359)
T 3vhe_A 72 LMSELKILIHIG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPV 147 (359)
T ss_dssp HHHHHHHHHHHC----CCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------
T ss_pred HHHHHHHHHhhc----CCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccch
Confidence 466777776663 233 233333443333446899999999999887432111
Q ss_pred -----------------------------------------CCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC
Q psy12972 538 -----------------------------------------GFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT 574 (1578)
Q Consensus 538 -----------------------------------------~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~ 574 (1578)
.++...+...+.+++ +..+|..|++|+|++|.|||+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~ 227 (359)
T 3vhe_A 148 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 227 (359)
T ss_dssp ------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred hhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc
Confidence 155566666555555 7889999999999999999975
Q ss_pred ---eeEEecCCchh
Q psy12972 575 ---WLYPVDLGDKF 585 (1578)
Q Consensus 575 ---~v~liDfG~~~ 585 (1578)
.++++|||...
T Consensus 228 ~~~~~kl~Dfg~a~ 241 (359)
T 3vhe_A 228 EKNVVKICDFGLAR 241 (359)
T ss_dssp GGGCEEECCCGGGS
T ss_pred CCCcEEEEecccee
Confidence 58999999764
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=9.7e-10 Score=131.28 Aligned_cols=137 Identities=17% Similarity=0.112 Sum_probs=92.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+...... .+ .. -.+..|.
T Consensus 23 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~--~~------------------~~--------------~~~~~E~ 68 (345)
T 1xjd_A 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM--DD------------------DV--------------ECTMVEK 68 (345)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH--TT------------------CH--------------HHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhh--hh------------------hH--------------HHHHHHH
Confidence 68999999999999975 79999999987542100 00 00 0123344
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.+. . .++. +.+-..+. ....-+|||||++|..|.+... ....++...+...+.+++ ++.+|..|++|+
T Consensus 69 ~il~~~---~-~hp~iv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 142 (345)
T 1xjd_A 69 RVLSLA---W-EHPFLTHMFCTFQ-TKENLFFVMEYLNGGDLMYHIQ-SCHKFDLSRATFYAAEIILGLQFLHSKGIVYR 142 (345)
T ss_dssp HHHHHH---T-TCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC
T ss_pred HHHHhc---C-CCCCCCcEEEEEE-eCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC
Confidence 444333 1 2332 33323332 2345689999999999987643 234577776666665655 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+||.|||+. .++++|||...
T Consensus 143 Dlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 143 DLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCB
T ss_pred CCChhhEEECCCCCEEEeEChhhh
Confidence 9999999964 59999999764
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.00 E-value=5.5e-10 Score=129.69 Aligned_cols=129 Identities=12% Similarity=0.089 Sum_probs=87.9
Q ss_pred hccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHH
Q psy12972 402 LFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQE 480 (1578)
Q Consensus 402 iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 480 (1578)
-|.-. +.||.|++|+||+|+.. +|+.||||+.++..... .+. .
T Consensus 32 ~y~i~--~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~----------------------------~~~------~ 75 (286)
T 3uqc_A 32 RYRLL--IFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLP----------------------------DDV------L 75 (286)
T ss_dssp TEEEE--EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSC----------------------------HHH------H
T ss_pred cEEEE--EEEcccCCeEEEEEEecCCCceEEEEEECcccccC----------------------------HHH------H
Confidence 34444 78999999999999975 69999999998653311 000 0
Q ss_pred HhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 481 LDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 481 lDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
-.|.+|++.+.++ .+..-+.+-.++ ......+|||||++|.+|.++. ..+....++...+.+++ +..+|.
T Consensus 76 ~~~~~e~~~l~~l----~hp~iv~~~~~~-~~~~~~~lv~e~~~g~~L~~~l---~~~~~~~~~~~i~~ql~~aL~~lH~ 147 (286)
T 3uqc_A 76 QETLSRTLRLSRI----DKPGVARVLDVV-HTRAGGLVVAEWIRGGSLQEVA---DTSPSPVGAIRAMQSLAAAADAAHR 147 (286)
T ss_dssp HHHHHHHHHHHTC----CCTTBCCEEEEE-EETTEEEEEEECCCEEEHHHHH---TTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcC----CCCCcceeeEEE-EECCcEEEEEEecCCCCHHHHH---hcCCChHHHHHHHHHHHHHHHHHHH
Confidence 1245555555443 232222222222 2234568999999999998873 34566677766666655 788999
Q ss_pred cCccccCCCCCCCCCC
Q psy12972 559 TGFVHADPHSGNDVNT 574 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~ 574 (1578)
.|++|+|+||+|||+.
T Consensus 148 ~givH~Dikp~NIll~ 163 (286)
T 3uqc_A 148 AGVALSIDHPSRVRVS 163 (286)
T ss_dssp TTCCCCCCSGGGEEEE
T ss_pred CCCccCCCCcccEEEc
Confidence 9999999999999953
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=1.2e-09 Score=125.52 Aligned_cols=136 Identities=18% Similarity=0.197 Sum_probs=94.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+..+..... .+ .-.+.+|+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~---------------------------------~~~~~~e~ 56 (284)
T 3kk8_A 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA--RD---------------------------------FQKLEREA 56 (284)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCH--HH---------------------------------HHHHHHHH
T ss_pred hhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCH--HH---------------------------------HHHHHHHH
Confidence 67999999999999965 79999999986542110 00 01235666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+-.++ ...+..++||||++|.++.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 57 ~~l~~l~----h~~i~~~~~~~-~~~~~~~~v~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 130 (284)
T 3kk8_A 57 RICRKLQ----HPNIVRLHDSI-QEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILESIAYCHSNGIVHRN 130 (284)
T ss_dssp HHHHHCC----CTTBCCEEEEE-ECSSEEEEEECCCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHHcC----CCCcCeEEEEE-EcCCEEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCC
Confidence 6666653 22223333333 22345689999999998876543 334577777766666655 7889999999999
Q ss_pred CCCCCCCCC---e---eEEecCCchh
Q psy12972 566 PHSGNDVNT---W---LYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~---v~liDfG~~~ 585 (1578)
++|.||++. . ++++|||...
T Consensus 131 ikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 131 LKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp CCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred CCHHHEEEecCCCCCcEEEeeceeeE
Confidence 999999973 2 8999999763
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.00 E-value=7e-10 Score=131.47 Aligned_cols=137 Identities=15% Similarity=0.052 Sum_probs=93.6
Q ss_pred cccccccceEEEEEEe------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVT------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+. .+|+.||||+.++...... .-.
T Consensus 51 ~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~ 94 (344)
T 1rjb_A 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSE------------------------------------REA 94 (344)
T ss_dssp EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------------------------------------------CHH
T ss_pred eeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHH------------------------------------HHH
Confidence 6899999999999996 2567899999875421100 012
Q ss_pred HHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhc----------------------CC
Q psy12972 483 FLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEK----------------------GF 539 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~----------------------~~ 539 (1578)
+.+|++.+.++. .++. +.+-.++ ......+|||||++|.+|.++..-... .+
T Consensus 95 ~~~E~~~l~~l~----~hp~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 169 (344)
T 1rjb_A 95 LMSELKMMTQLG----SHENIVNLLGAC-TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169 (344)
T ss_dssp HHHHHHHHHHHC----CCTTBCCEEEEE-CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------C
T ss_pred HHHHHHHHHhhc----CCCCeeeEEEEE-eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccC
Confidence 456666666662 2333 2222322 234567899999999999887542211 25
Q ss_pred CHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 540 SLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 540 ~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+...+...+.+++ +..+|..|++|+|++|.|||+. .++++|||....
T Consensus 170 ~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~ 221 (344)
T 1rjb_A 170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARD 221 (344)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSC
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcc
Confidence 6666666666655 7889999999999999999964 599999997643
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=2.4e-09 Score=138.18 Aligned_cols=138 Identities=13% Similarity=0.100 Sum_probs=98.5
Q ss_pred CCcccccccceEEEEEEec---CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 407 DENPIAAASLAQVFRAVTK---EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 407 d~~PlasaSiaQVhrA~l~---~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.+.||.|++|.||+|... +|+.||||+.+....... ..-+|
T Consensus 373 ~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~-----------------------------------~~~~~ 417 (635)
T 4fl3_A 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA-----------------------------------LKDEL 417 (635)
T ss_dssp EEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGG-----------------------------------GHHHH
T ss_pred cCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHH-----------------------------------HHHHH
Confidence 3457999999999999653 578999999976533210 01134
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
.+|++.+.+++ +...|.+-.++. ....+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|+
T Consensus 418 ~~E~~il~~l~----hpnIv~l~~~~~--~~~~~lv~E~~~~g~L~~~l~-~~~~l~~~~~~~i~~qi~~~L~yLH~~~i 490 (635)
T 4fl3_A 418 LAEANVMQQLD----NPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLEESNF 490 (635)
T ss_dssp HHHHHHHHHCC----CTTBCCEEEEEE--SSSEEEEEECCTTEEHHHHHH-HCTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCC----CCCEeeEEEEEe--cCCEEEEEEccCCCCHHHHHh-hCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 66777776653 333344444442 234679999999999988753 234577777766666665 788999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|++|.|||+. .++++|||....
T Consensus 491 iHrDLkp~NILl~~~~~~kL~DFGla~~ 518 (635)
T 4fl3_A 491 VHRDLAARNVLLVTQHYAKISDFGLSKA 518 (635)
T ss_dssp CCSCCSGGGEEEEETTEEEECCTTHHHH
T ss_pred eCCCCChHhEEEeCCCCEEEEEcCCccc
Confidence 9999999999964 599999997643
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=99.00 E-value=9e-10 Score=132.33 Aligned_cols=146 Identities=18% Similarity=0.178 Sum_probs=99.6
Q ss_pred ChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHH
Q psy12972 398 THSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVP 476 (1578)
Q Consensus 398 ~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 476 (1578)
.+.+-|.-. +.||.|++|.||+|+.+ +|+.||||+....-... .+
T Consensus 26 ~~~~~y~~~--~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--~~------------------------------ 71 (362)
T 2bdw_A 26 KFSDNYDVK--EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA--RD------------------------------ 71 (362)
T ss_dssp HHHHHEEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCH--HH------------------------------
T ss_pred CcccCeEEe--eEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCH--HH------------------------------
Confidence 344455544 67999999999999975 79999999986432110 00
Q ss_pred HHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HH
Q psy12972 477 LEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 477 l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~ 554 (1578)
.-.+.+|++.+.++. +...+.+-.++. .....+|||||++|.+|.+... ....++...+...+.+++ +.
T Consensus 72 ---~~~~~~E~~il~~l~----hpnIv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~al~ 142 (362)
T 2bdw_A 72 ---FQKLEREARICRKLQ----HPNIVRLHDSIQ-EESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILESIA 142 (362)
T ss_dssp ---HHHHHHHHHHHHHCC----CTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHT-TCSCCCHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHhCC----CCCCCeEEEEEE-eCCEEEEEEecCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHH
Confidence 012456666666552 333233333332 2345689999999999876532 233467777666666655 78
Q ss_pred HHHHcCccccCCCCCCCCCC------eeEEecCCchhh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT------WLYPVDLGDKFR 586 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~------~v~liDfG~~~~ 586 (1578)
.+|..|++|+|++|.|||+. .++++|||....
T Consensus 143 ~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 143 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp HHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred HHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 89999999999999999974 389999997643
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.00 E-value=7.9e-10 Score=132.75 Aligned_cols=133 Identities=15% Similarity=0.067 Sum_probs=95.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+...+.... -.+.+|+
T Consensus 26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~ 67 (361)
T 3uc3_A 26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID--------------------------------------ENVQREI 67 (361)
T ss_dssp EEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC--------------------------------------HHHHHHH
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc--------------------------------------HHHHHHH
Confidence 67999999999999976 89999999986432110 0134555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++ .+...+.+-.++. ..+..+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 68 ~~l~~l----~hpniv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~D 141 (361)
T 3uc3_A 68 INHRSL----RHPNIVRFKEVIL-TPTHLAIIMEYASGGELYERIC-NAGRFSEDEARFFFQQLLSGVSYCHSMQICHRD 141 (361)
T ss_dssp HHHHHC----CCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCC
T ss_pred HHHHhC----CCCCCCcEEEEEe-eCCEEEEEEEeCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 555554 2333344444442 2345689999999999987643 334677777777666665 7889999999999
Q ss_pred CCCCCCCCC-----eeEEecCCchh
Q psy12972 566 PHSGNDVNT-----WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~-----~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 142 lkp~Nill~~~~~~~~kl~Dfg~a~ 166 (361)
T 3uc3_A 142 LKLENTLLDGSPAPRLKICDFGYSK 166 (361)
T ss_dssp CCGGGEEECSSSSCCEEECCCCCC-
T ss_pred CCHHHEEEcCCCCceEEEeecCccc
Confidence 999999974 38999999764
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=6e-10 Score=137.29 Aligned_cols=137 Identities=13% Similarity=0.067 Sum_probs=93.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+..... ... ..-.++.|.
T Consensus 80 ~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~----------------~~~------------------~~~~~~~E~ 125 (437)
T 4aw2_A 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML----------------KRA------------------ETACFREER 125 (437)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH----------------HTT------------------TTCCHHHHH
T ss_pred EEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhh----------------hHH------------------HHHHHHHHH
Confidence 68999999999999976 5899999998642110 000 001134555
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..+.++ +++. +.+-..+ .-...-+|||||++|.+|.++..-....++...+...+.+++ +..+|..|++||
T Consensus 126 ~il~~~-----~hp~Iv~l~~~~-~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHr 199 (437)
T 4aw2_A 126 DVLVNG-----DSKWITTLHYAF-QDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHR 199 (437)
T ss_dssp HHHHHS-----CTTTBCCEEEEE-ECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHhC-----CCCCEEEEEEEE-eeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEec
Confidence 555443 2332 2222222 223456899999999999887542235677666665555555 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+||.|||+. .++++|||...
T Consensus 200 DLKp~NILl~~~g~vkL~DFGla~ 223 (437)
T 4aw2_A 200 DIKPDNILMDMNGHIRLADFGSCL 223 (437)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCE
T ss_pred ccCHHHeeEcCCCCEEEcchhhhh
Confidence 9999999964 59999999763
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=6.1e-10 Score=136.17 Aligned_cols=136 Identities=14% Similarity=0.034 Sum_probs=92.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+..... ..- . .-.+..|.
T Consensus 75 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~----------------~~~--~----------------~~~~~~E~ 120 (410)
T 3v8s_A 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI----------------KRS--D----------------SAFFWEER 120 (410)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH----------------HTC--C----------------CSTHHHHH
T ss_pred EEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhh----------------hhH--H----------------HHHHHHHH
Confidence 68999999999999976 6999999998642110 000 0 00134455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+..-|.+-..+. -...-+|||||++|.+|.++ +...+++...+...+.+++ ++.+|..|++|||
T Consensus 121 ~il~~l----~hp~Iv~l~~~~~-~~~~~~lV~E~~~gg~L~~~--l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrD 193 (410)
T 3v8s_A 121 DIMAFA----NSPWVVQLFYAFQ-DDRYLYMVMEYMPGGDLVNL--MSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRD 193 (410)
T ss_dssp HHHHHC----CCTTBCCEEEEEE-CSSEEEEEECCCTTEEHHHH--HHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhC----CCCCCCeEEEEEE-ECCEEEEEEeCCCCCcHHHH--HHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence 444443 2222233323332 23445799999999999886 3456777766655555555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 194 LKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 194 VKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp CSGGGEEECTTSCEEECCCTTCE
T ss_pred CCHHHeeECCCCCEEEeccceeE
Confidence 999999964 69999999764
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.3e-09 Score=140.20 Aligned_cols=136 Identities=15% Similarity=0.144 Sum_probs=97.7
Q ss_pred cccccccceEEEEEEec---CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 409 NPIAAASLAQVFRAVTK---EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~---~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
..||.|++|+||+|+.+ +|+.||||+.+.+.... + .-+|.+
T Consensus 342 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~---~---------------------------------~~~~~~ 385 (613)
T 2ozo_A 342 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA---D---------------------------------TEEMMR 385 (613)
T ss_dssp EEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSST---T---------------------------------HHHHHH
T ss_pred cEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChH---H---------------------------------HHHHHH
Confidence 36999999999999875 57789999987653211 0 012456
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
|++.+.++ .+...|.+-.++.. ...+|||||++|.+|.++..-....++...+...+.+++ +..+|..|++|
T Consensus 386 E~~il~~l----~hpniv~l~~~~~~--~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH 459 (613)
T 2ozo_A 386 EAQIMHQL----DNPYIVRLIGVCQA--EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 459 (613)
T ss_dssp HHHHHTTC----CCTTBCCEEEEEES--SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhC----CCCCEeeEEEEecc--CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEc
Confidence 66666554 23333444444432 456899999999999887433334577777777666666 88899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchhh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|++|.|||+. .++++|||....
T Consensus 460 rDlkp~NILl~~~~~vkL~DFGla~~ 485 (613)
T 2ozo_A 460 RNLAARNVLLVNRHYAKISDFGLSKA 485 (613)
T ss_dssp SCCSGGGEEEEETTEEEECCCSTTTT
T ss_pred CcCCHHHEEEcCCCcEEEeeccCccc
Confidence 99999999964 599999998743
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=8.5e-10 Score=126.30 Aligned_cols=137 Identities=15% Similarity=0.120 Sum_probs=95.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+..+...... + ..-.+.+|+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--~--------------------------------~~~~~~~e~ 62 (276)
T 2h6d_A 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSL--D--------------------------------VVGKIKREI 62 (276)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT--T--------------------------------CHHHHHHHH
T ss_pred eeecCCCCeEEEEEEECCCCceEEEEEeccccccch--h--------------------------------HHHHHHHHH
Confidence 68999999999999976 899999999875321100 0 001235566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.+++ +...+.+-..+. ..+..+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 63 ~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d 136 (276)
T 2h6d_A 63 QNLKLFR----HPHIIKLYQVIS-TPTDFFMVMEYVSGGELFDYIC-KHGRVEEMEARRLFQQILSAVDYCHRHMVVHRD 136 (276)
T ss_dssp HHHHTCC----CTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCC
T ss_pred HHHhcCC----CCCEeEEEEEEe-cCCeEEEEEeccCCCcHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Confidence 6655442 222233323332 2355689999999999988743 234567777666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 137 l~p~Nil~~~~~~~~l~dfg~~~ 159 (276)
T 2h6d_A 137 LKPENVLLDAHMNAKIADFGLSN 159 (276)
T ss_dssp CCGGGEEECTTSCEEECCCCGGG
T ss_pred CChhhEEECCCCCEEEeeccccc
Confidence 999999965 59999999764
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=8e-10 Score=130.24 Aligned_cols=136 Identities=15% Similarity=0.024 Sum_probs=96.5
Q ss_pred cccccccceEEEEEEe-----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVT-----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|.||+|+. .+|+.||||+.+..-... .-.+
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------------------------------~~~~ 71 (327)
T 3lxl_A 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ-------------------------------------QRDF 71 (327)
T ss_dssp EEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHH-------------------------------------HHHH
T ss_pred hhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHH-------------------------------------HHHH
Confidence 6899999999999984 478999999986542111 0124
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeC-CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWD-KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~-~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|++.+.++ .+...+.+-.++.. -....+|||||++|.+|.++.......++...+...+.+++ +..+|..|
T Consensus 72 ~~E~~~l~~l----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ 147 (327)
T 3lxl_A 72 QREIQILKAL----HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 147 (327)
T ss_dssp HHHHHHHHTC----CCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhc----CCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 5666666555 22222222223322 22335799999999999987654345578777777666665 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.|||+. .++++|||...
T Consensus 148 ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 148 CVHRDLAARNILVESEAHVKIADFGLAK 175 (327)
T ss_dssp EECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred ccCCCCChhhEEECCCCCEEEcccccce
Confidence 99999999999964 59999999764
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=9.2e-10 Score=127.73 Aligned_cols=145 Identities=17% Similarity=0.220 Sum_probs=100.8
Q ss_pred CChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHH
Q psy12972 397 CTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKV 475 (1578)
Q Consensus 397 ~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 475 (1578)
.++.+.|.-. +.||+|++|.||+|+.. +|+.||||+....-...
T Consensus 15 ~~~~~~y~i~--~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--------------------------------- 59 (302)
T 2j7t_A 15 LDPNEVWEIV--GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE--------------------------------- 59 (302)
T ss_dssp SCGGGTEEEE--EEEECSTTCCEEEEEETTTCCEEEEEEEC----CC---------------------------------
T ss_pred cCCccceeec--ceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHH---------------------------------
Confidence 3455666665 57999999999999976 69999999986432110
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--H
Q psy12972 476 PLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--A 553 (1578)
Q Consensus 476 ~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l 553 (1578)
.-++.+|++.+.++ .+..-+.+-.++. .....+|||||++|.++.++..-...+++...+...+.+++ +
T Consensus 60 ----~~~~~~e~~~l~~l----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l 130 (302)
T 2j7t_A 60 ----LEDYIVEIEILATC----DHPYIVKLLGAYY-HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEAL 130 (302)
T ss_dssp ----HHHHHHHHHHHHHC----CCTTBCCEEEEEE-CC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHhcC----CCCCEeeeeeeee-eCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence 01235566666554 2222233323332 23566899999999999887544456688777777666665 7
Q ss_pred HHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 554 EQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 554 ~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
..+|..|++|+|++|.||++. .++++|||...
T Consensus 131 ~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 165 (302)
T 2j7t_A 131 NFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSA 165 (302)
T ss_dssp HHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHH
T ss_pred HHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCc
Confidence 889999999999999999965 59999999754
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=98.99 E-value=6.2e-10 Score=133.21 Aligned_cols=139 Identities=14% Similarity=0.136 Sum_probs=94.2
Q ss_pred cccccccceEEEEEEe----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVT----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|+. .+|+.||||+.+......-... .-.+.
T Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~---------------------------------~~~~~ 106 (355)
T 1vzo_A 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKT---------------------------------TEHTR 106 (355)
T ss_dssp EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESS---------------------------------GGGCC
T ss_pred EEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhH---------------------------------HHHHH
Confidence 6799999999999997 3799999999875321000000 00123
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|.+.+.+++ +++.|.-..-+.......+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++
T Consensus 107 ~E~~~l~~l~----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv 181 (355)
T 1vzo_A 107 TERQVLEHIR----QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLS-QRERFTEHEVQIYVGEIVLALEHLHKLGII 181 (355)
T ss_dssp CHHHHHHHHH----TCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHH-HHSCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHcc----CCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 4555555554 23332211111122345689999999999988743 234577777766666655 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.|||+. .++++|||...
T Consensus 182 H~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 182 YRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp CCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred cCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 999999999974 59999999764
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=1e-09 Score=131.04 Aligned_cols=149 Identities=19% Similarity=0.212 Sum_probs=100.9
Q ss_pred hCCChhhhccccCCcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHH
Q psy12972 395 FGCTHSQLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINEL 473 (1578)
Q Consensus 395 lG~~~~~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 473 (1578)
+...+.+.|... +.||.|++|+||+|+. .+|+.||||+........- +
T Consensus 48 ~~~~~~~~y~~~--~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~----------------------------~- 96 (348)
T 1u5q_A 48 FKDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSN----------------------------E- 96 (348)
T ss_dssp CCSCHHHHEEEE--EEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHH----------------------------H-
T ss_pred cccchhhheeee--eEEccCCCEEEEEEEEccCCeEEEEEEEccccccch----------------------------H-
Confidence 344566666665 6799999999999995 5899999999864321100 0
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH-
Q psy12972 474 KVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF- 552 (1578)
Q Consensus 474 ~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~- 552 (1578)
..-++.+|++.+.+++ +...+.+-.++. .....+|||||++| .+.+........++...+...+.+++
T Consensus 97 -----~~~~~~~E~~~l~~l~----hpniv~~~~~~~-~~~~~~lv~e~~~g-~l~~~l~~~~~~l~~~~~~~i~~qi~~ 165 (348)
T 1u5q_A 97 -----KWQDIIKEVRFLQKLR----HPNTIQYRGCYL-REHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQ 165 (348)
T ss_dssp -----HHHHHHHHHHHHHHCC----CTTBCCEEEEEE-ETTEEEEEEECCSE-EHHHHHHHHTSCCCHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHhCC----CCCEeeEEEEEE-ECCeEEEEEecCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 0012456666665553 333233333332 23456899999987 45554333445677777766666655
Q ss_pred -HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 553 -AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 553 -l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.|||+. .++++|||...
T Consensus 166 aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 202 (348)
T 1u5q_A 166 GLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSAS 202 (348)
T ss_dssp HHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCB
T ss_pred HHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCce
Confidence 7889999999999999999964 69999999764
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=98.99 E-value=7.7e-10 Score=128.24 Aligned_cols=137 Identities=15% Similarity=0.089 Sum_probs=94.7
Q ss_pred cccccccceEEEEEEecC----CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTKE----GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~----G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|+..+ +..||||+........ ..-.+.
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~------------------------------------~~~~~~ 74 (298)
T 3f66_A 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG------------------------------------EVSQFL 74 (298)
T ss_dssp EEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHH------------------------------------HHHHHH
T ss_pred ceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHH------------------------------------HHHHHH
Confidence 689999999999999653 2368999876422110 001245
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++. +...+.+-.++.+-....++||||++|.+|.++..-....++...+...+.+++ +..+|..|++
T Consensus 75 ~E~~~l~~l~----h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~ 150 (298)
T 3f66_A 75 TEGIIMKDFS----HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 150 (298)
T ss_dssp HHHHHHHTCC----CTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCC----CCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 5666555542 333344444433334556899999999999887543344567777766665655 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.||++. .++++|||...
T Consensus 151 H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 151 HRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp CSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred CCCCchheEEECCCCCEEECcccccc
Confidence 999999999965 59999999764
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=1.6e-09 Score=126.22 Aligned_cols=140 Identities=18% Similarity=0.138 Sum_probs=95.0
Q ss_pred CCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 407 DENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 407 d~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
..+.||.|++|.||+|+. +|+.||||+..+.....-. +.. -.+.+|
T Consensus 35 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~---------------------------~~~------~~~~~E 80 (307)
T 2nru_A 35 GGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTE---------------------------ELK------QQFDQE 80 (307)
T ss_dssp TCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTT---------------------------THH------HHHHHH
T ss_pred cCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchH---------------------------HHH------HHHHHH
Confidence 347899999999999986 7899999998754321000 000 124556
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh--cCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE--KGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~--~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
++.+.++. +..-+.+-.++ ......+|||||++|.+|.+...... ..++...+...+.+++ +..+|..|++
T Consensus 81 ~~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~ 155 (307)
T 2nru_A 81 IKVMAKCQ----HENLVELLGFS-SDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155 (307)
T ss_dssp HHHHHHCC----CTTBCCEEEEE-CSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHhcC----CCCeEEEEEEE-ecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCee
Confidence 66665552 22222222222 22345689999999999988754222 2366666666655555 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.||++. .++++|||...
T Consensus 156 H~dlkp~Nili~~~~~~kl~Dfg~~~ 181 (307)
T 2nru_A 156 HRDIKSANILLDEAFTAKISDFGLAR 181 (307)
T ss_dssp CSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred cCCCCHHHEEEcCCCcEEEeeccccc
Confidence 999999999965 58999999653
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=98.99 E-value=7.7e-10 Score=131.91 Aligned_cols=139 Identities=22% Similarity=0.196 Sum_probs=95.0
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.+-|.-. +.||.|++|.||+|+.+ +|+.||||+.......
T Consensus 20 ~~~~y~~~--~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------------ 61 (342)
T 2qr7_A 20 FTDGYEVK--EDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD------------------------------------ 61 (342)
T ss_dssp HHHHEEEE--EEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC------------------------------------
T ss_pred ccccEEEE--EEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC------------------------------------
Confidence 44555544 68999999999999975 7999999998643210
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
...|.+.+.++. .+...+.+-.++. ....-+|||||++|.+|.+... ....++...+...+.+++ +..
T Consensus 62 -----~~~E~~~l~~~~---~hp~iv~~~~~~~-~~~~~~lv~E~~~gg~L~~~i~-~~~~~~~~~~~~~~~qi~~al~~ 131 (342)
T 2qr7_A 62 -----PTEEIEILLRYG---QHPNIITLKDVYD-DGKYVYVVTELMKGGELLDKIL-RQKFFSEREASAVLFTITKTVEY 131 (342)
T ss_dssp -----CHHHHHHHHHHT---TSTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHH-TCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -----hHHHHHHHHHhc---CCCCcCeEEEEEE-cCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHH
Confidence 123333343332 2222233333332 2345589999999999887642 234467776666666655 788
Q ss_pred HHHcCccccCCCCCCCCCC-------eeEEecCCchh
Q psy12972 556 IFQTGFVHADPHSGNDVNT-------WLYPVDLGDKF 585 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~-------~v~liDfG~~~ 585 (1578)
+|..|++|+|+||.|||+. .++++|||...
T Consensus 132 lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 132 LHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp HHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred HHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 9999999999999999952 38999999764
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=1.6e-09 Score=124.50 Aligned_cols=135 Identities=14% Similarity=0.074 Sum_probs=96.7
Q ss_pred cccccccceEEEEEEecC----CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTKE----GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~----G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|+..+ ++.||||+.++..... ..-.|.
T Consensus 18 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~ 61 (281)
T 3cc6_A 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD------------------------------------NKEKFM 61 (281)
T ss_dssp EEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHH------------------------------------HHHHHH
T ss_pred EEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCch------------------------------------HHHHHH
Confidence 689999999999998642 3469999987642110 011346
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++. +..-+.+-.++. ....++||||++|.+|.++..-....++...+...+.+++ +..+|..|++
T Consensus 62 ~E~~~l~~l~----h~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 135 (281)
T 3cc6_A 62 SEAVIMKNLD----HPHIVKLIGIIE--EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 135 (281)
T ss_dssp HHHHHHHHHC----CTTBCCEEEEEC--SSSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCC----CCCcceEEEEEc--CCCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 6777777663 333333334432 2456899999999999887543344577777766666655 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.||++. .++++|||...
T Consensus 136 H~dlkp~Nil~~~~~~~kl~Dfg~~~ 161 (281)
T 3cc6_A 136 HRDIAVRNILVASPECVKLGDFGLSR 161 (281)
T ss_dssp CCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred cCCCccceEEECCCCcEEeCccCCCc
Confidence 999999999964 59999999764
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=98.99 E-value=7e-10 Score=127.46 Aligned_cols=136 Identities=15% Similarity=0.086 Sum_probs=93.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+...... ..+-.+.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------------------------------~~~~~~~~e~ 60 (279)
T 3fdn_A 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA----------------------------------GVEHQLRREV 60 (279)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHH----------------------------------TCHHHHHHHH
T ss_pred eEEecCCCeEEEEEEEccCCcEEEEEEEeccccchh----------------------------------hHHHHHHHHH
Confidence 68999999999999865 688999999865321110 0011234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-.++ ...+..++||||++|.++.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 61 ~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~l~~~l~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~d 134 (279)
T 3fdn_A 61 EIQSHLR----HPNILRLYGYF-HDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYCHSKRVIHRD 134 (279)
T ss_dssp HHHTTCC----CTTBCCEEEEE-ECSSEEEEEECCCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECC
T ss_pred HHHHcCC----CCCCcchhheE-ecCCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCEeccc
Confidence 5554432 22222222222 23355689999999999887643 234577776666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCch
Q psy12972 566 PHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~ 584 (1578)
+||.|||+. .++++|||..
T Consensus 135 lkp~Nili~~~~~~~l~Dfg~~ 156 (279)
T 3fdn_A 135 IKPENLLLGSAGELKIADFGWS 156 (279)
T ss_dssp CCGGGEEECTTSCEEECSCCEE
T ss_pred CChHhEEEcCCCCEEEEecccc
Confidence 999999964 5999999965
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=5.8e-10 Score=129.23 Aligned_cols=131 Identities=17% Similarity=0.110 Sum_probs=89.6
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+. +|+.||||+..+.-... +..|.+
T Consensus 14 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~----------------------------------------~~~e~~ 52 (301)
T 3q4u_A 14 ECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKS----------------------------------------WFRETE 52 (301)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEECGGGHHH----------------------------------------HHHHHH
T ss_pred EeeccCCCcEEEEEEE-CCEEEEEEEeccccchh----------------------------------------hHHHHH
Confidence 6799999999999987 79999999986542211 112222
Q ss_pred HHHHHHHhhCCCCCeeecEEeeC---CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHH------
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWD---KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIF------ 557 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~---~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~------ 557 (1578)
.+.... +.+...+.+-..... ....-+|||||++|.+|.++. ....++...+...+.++. +..+|
T Consensus 53 ~~~~~~--l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ 128 (301)
T 3q4u_A 53 LYNTVM--LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFGT 128 (301)
T ss_dssp HHHHTC--CCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHH--TTCCBCHHHHHHHHHHHHHHHHHHHSCBCST
T ss_pred HHHHhh--ccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHH--hhcccCHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 222111 222222222222111 122357999999999998874 456778777777766665 78889
Q ss_pred --HcCccccCCCCCCCCCC---eeEEecCCch
Q psy12972 558 --QTGFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 558 --~~G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
..|++|+|++|.|||+. .++++|||..
T Consensus 129 ~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp TCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred cCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 89999999999999965 5899999975
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.1e-09 Score=135.45 Aligned_cols=144 Identities=16% Similarity=0.167 Sum_probs=98.1
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.+-|.-. +.||.|++|.||+|+.+ +|+.||||+........ .
T Consensus 9 ~~~~Y~i~--~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~--~-------------------------------- 52 (444)
T 3soa_A 9 FTEEYQLF--EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSA--R-------------------------------- 52 (444)
T ss_dssp HHHHEEEE--EEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHH--H--------------------------------
T ss_pred ccCCeEEE--EEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCH--H--------------------------------
Confidence 34445544 67999999999999864 89999999986432110 0
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
..-.+.+|++.+.++. +..-+.+-.++. .....+|||||++|.+|.+... ....++...+...+.+++ +..
T Consensus 53 -~~~~~~~E~~il~~l~----hpnIv~l~~~~~-~~~~~~lv~E~~~gg~L~~~i~-~~~~~~e~~~~~i~~qil~aL~~ 125 (444)
T 3soa_A 53 -DHQKLEREARICRLLK----HPNIVRLHDSIS-EEGHHYLIFDLVTGGELFEDIV-AREYYSEADASHCIQQILEAVLH 125 (444)
T ss_dssp -HHHHHHHHHHHHHHCC----BTTBCCEEEEEE-CSSEEEEEECCCBCCBHHHHHH-HCSCCCHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHhCC----CcCCCeEEEEEE-ECCEEEEEEEeCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHH
Confidence 0112456776666552 333344434432 3355689999999999977643 334577777766666665 788
Q ss_pred HHHcCccccCCCCCCCCCC------eeEEecCCchh
Q psy12972 556 IFQTGFVHADPHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~------~v~liDfG~~~ 585 (1578)
+|..|++|+|+||.|||+. .++++|||...
T Consensus 126 lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 126 CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp HHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred HHHCCccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 9999999999999999964 48999999763
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.99 E-value=5.2e-10 Score=133.42 Aligned_cols=143 Identities=15% Similarity=0.127 Sum_probs=98.8
Q ss_pred cccccccceEEEEEEec---------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK---------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQ 479 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~---------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 479 (1578)
+.||.|++|.||+|+.. +|+.||||+.... ..+..++.+++.+
T Consensus 48 ~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--~~~~~E~~~l~~l-------------------------- 99 (352)
T 2jii_A 48 SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--GRLFNEQNFFQRA-------------------------- 99 (352)
T ss_dssp EEEEEETTEEEEEEEECC-----------CEEEEEEETT--STHHHHHHHHHHH--------------------------
T ss_pred EEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--chHHHHHHHHHHh--------------------------
Confidence 68999999999999976 3899999998754 2222232222211
Q ss_pred HHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCC---CCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--H
Q psy12972 480 ELDFLNEGRNAERCSKDLAHLPYVYIPRILWDK---SSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--A 553 (1578)
Q Consensus 480 ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~---~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l 553 (1578)
+ -.|..++...+...+.+.+|+++... ....+|||||+ |.+|.++..-. ...++...+...+.+++ +
T Consensus 100 --~----h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L 172 (352)
T 2jii_A 100 --A----KPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDAL 172 (352)
T ss_dssp --C----CHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHH
T ss_pred --c----ccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHH
Confidence 0 12333333444555556666665422 34568999999 99999875422 25688888777777766 7
Q ss_pred HHHHHcCccccCCCCCCCCCC-----eeEEecCCchhh
Q psy12972 554 EQIFQTGFVHADPHSGNDVNT-----WLYPVDLGDKFR 586 (1578)
Q Consensus 554 ~~i~~~G~vH~DpHPGNilv~-----~v~liDfG~~~~ 586 (1578)
..+|..|++|+|++|.|||+. .++++|||....
T Consensus 173 ~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~ 210 (352)
T 2jii_A 173 EFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFR 210 (352)
T ss_dssp HHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBC
T ss_pred HHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceee
Confidence 889999999999999999964 689999997643
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=98.99 E-value=6.8e-10 Score=129.62 Aligned_cols=137 Identities=16% Similarity=0.075 Sum_probs=95.0
Q ss_pred cccccccceEEEEEEe------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVT------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+. .+|+.||||+.+.+.... ..-.
T Consensus 33 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 76 (316)
T 2xir_A 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS------------------------------------EHRA 76 (316)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHH------------------------------------HHHH
T ss_pred eEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcH------------------------------------HHHH
Confidence 6899999999999984 367999999987543211 0013
Q ss_pred HHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhc---------------CCCHHHHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEK---------------GFSLADVDR 546 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~---------------~~~~~~v~~ 546 (1578)
+.+|++.+.++. +++. +.+-..+..-...-++||||++|.+|.++..-... .++...+..
T Consensus 77 ~~~E~~~l~~l~----~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (316)
T 2xir_A 77 LMSELKILIHIG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152 (316)
T ss_dssp HHHHHHHHHHHC----CCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHH
T ss_pred HHHHHHHHHhcc----cCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHH
Confidence 456676776663 2332 33333333333346899999999999887432111 156666666
Q ss_pred HHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 547 KLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 547 ~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
.+.+++ +..+|..|++|+|++|.||++. .++++|||...
T Consensus 153 ~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 196 (316)
T 2xir_A 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196 (316)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGS
T ss_pred HHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCcccc
Confidence 655555 7889999999999999999975 58999999764
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.1e-09 Score=129.50 Aligned_cols=148 Identities=13% Similarity=0.130 Sum_probs=99.9
Q ss_pred hhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHH
Q psy12972 400 SQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLE 478 (1578)
Q Consensus 400 ~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 478 (1578)
.+-|... +.||.|++|.||+|+.+ +|+.||||+.......... ....
T Consensus 10 ~~~y~~~--~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-----------------~~~~------------- 57 (326)
T 2y0a_A 10 DDYYDTG--EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR-----------------RGVS------------- 57 (326)
T ss_dssp HHHEEEE--EEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCS-----------------SSBC-------------
T ss_pred ccceEec--eEEeeCCCeEEEEEEECCCCcEEEEEEEEcccccccc-----------------chhh-------------
Confidence 3344443 67999999999999975 7999999998654321100 0000
Q ss_pred HHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHH
Q psy12972 479 QELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQI 556 (1578)
Q Consensus 479 ~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i 556 (1578)
.-++.+|++.+.++. +...+.+-.++ ......+|||||++|.+|.++.. ....++...+...+.+++ +..+
T Consensus 58 -~~~~~~E~~~l~~l~----hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~al~~l 130 (326)
T 2y0a_A 58 -REDIEREVSILKEIQ----HPNVITLHEVY-ENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFLKQILNGVYYL 130 (326)
T ss_dssp -HHHHHHHHHHHHHCC----CTTBCCEEEEE-ECSSEEEEEEECCCSCBHHHHHT-TSSCCBHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhCC----CCCCCcEEEEE-EeCCEEEEEEEcCCCCCHHHHHH-hcCCcCHHHHHHHHHHHHHHHHHH
Confidence 112456666666553 22223333333 23455689999999999988743 234567777766666665 7889
Q ss_pred HHcCccccCCCCCCCCCC-------eeEEecCCchhh
Q psy12972 557 FQTGFVHADPHSGNDVNT-------WLYPVDLGDKFR 586 (1578)
Q Consensus 557 ~~~G~vH~DpHPGNilv~-------~v~liDfG~~~~ 586 (1578)
|..|++|+|++|.|||+. .++++|||....
T Consensus 131 H~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 167 (326)
T 2y0a_A 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167 (326)
T ss_dssp HHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred HHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence 999999999999999963 489999997643
|
| >2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.54 E-value=4.7e-11 Score=121.32 Aligned_cols=91 Identities=21% Similarity=0.177 Sum_probs=79.0
Q ss_pred CCCCcEEEEEEcCCCcccccccHHH---HHHHHHhCCCceEEEEEECc--cchhhHhHcCccccCCcEEEE--cCCcc--
Q psy12972 871 SYTTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVH--NEQGLARRLGVGSQLPQIALL--TDGRT-- 941 (1578)
Q Consensus 871 s~~~~~LV~FyapwCg~Ck~l~p~~---~~lA~~l~~~~v~~a~VDc~--~~~~L~~k~gV~~~~PTl~lf--~~G~~-- 941 (1578)
..+++++|.||++||++|+.+.|.+ +++++.+.+. +.++.||++ .+.+++++|+|.+ +||+++| ++|+.
T Consensus 17 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~~~v~~-~Pt~~~~d~~~G~~~~ 94 (130)
T 2lst_A 17 AHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEAR-FVVASVSVDTPEGQELARRYRVPG-TPTFVFLVPKAGAWEE 94 (130)
Confidence 3468999999999999999999999 8999888764 899999994 5688999999998 9999999 67887
Q ss_pred ccccCCCCCHHHHHHHHHhhCC
Q psy12972 942 SFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 942 ~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
...+.|..+.+.|.+++.+.+.
T Consensus 95 ~~~~~G~~~~~~l~~~l~~~~~ 116 (130)
T 2lst_A 95 VGRLFGSRPRAEFLKELRQVCV 116 (130)
Confidence 6666788899999999987763
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.98 E-value=1e-09 Score=133.56 Aligned_cols=137 Identities=16% Similarity=0.098 Sum_probs=93.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+......- .+ . -.+..|.
T Consensus 58 ~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~-~~-------------------~--------------~~~~~E~ 103 (396)
T 4dc2_A 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDD-ED-------------------I--------------DWVQTEK 103 (396)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC------------------------C--------------CHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCH-HH-------------------H--------------HHHHHHH
Confidence 68999999999999976 689999999875432110 00 0 0123444
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +++. |.+-..+ .-...-+|||||++|..|.+... ....++...+...+.+++ +..+|..|++||
T Consensus 104 ~il~~~~----~hp~Iv~l~~~~-~~~~~~~lV~E~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~~aL~~LH~~givHr 177 (396)
T 4dc2_A 104 HVFEQAS----NHPFLVGLHSCF-QTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISLALNYLHERGIIYR 177 (396)
T ss_dssp HHHHHHT----TCTTBCCEEEEE-ECSSEEEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC
T ss_pred HHHHhcC----CCCCcCeeEEEE-EECCEEEEEEEcCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEec
Confidence 4444432 2333 2222222 22345689999999999977643 334677776666665555 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+||.|||+. .++++|||...
T Consensus 178 DLKp~NILl~~~g~ikL~DFGla~ 201 (396)
T 4dc2_A 178 DLKLDNVLLDSEGHIKLTDYGMCK 201 (396)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCB
T ss_pred cCCHHHEEECCCCCEEEeecceee
Confidence 9999999964 59999999763
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.98 E-value=7e-10 Score=132.52 Aligned_cols=132 Identities=19% Similarity=0.167 Sum_probs=89.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+..... -.+++|+
T Consensus 59 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---------------------------------------~~~~~E~ 99 (349)
T 2w4o_A 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK---------------------------------------KIVRTEI 99 (349)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------------------------------------------C
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEeccchhH---------------------------------------HHHHHHH
Confidence 68999999999999976 6899999998653210 0134555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-.++ ......+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 100 ~~l~~l~----h~niv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~D 173 (349)
T 2w4o_A 100 GVLLRLS----HPNIIKLKEIF-ETPTEISLVLELVTGGELFDRIV-EKGYYSERDAADAVKQILEAVAYLHENGIVHRD 173 (349)
T ss_dssp HHHHHCC----CTTBCCEEEEE-ECSSEEEEEECCCCSCBHHHHHT-TCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHhCC----CCCCcceeeeE-ecCCeEEEEEEeCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 5565543 32223333333 23455689999999999987642 233467777766666665 7889999999999
Q ss_pred CCCCCCCCC------eeEEecCCchh
Q psy12972 566 PHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~------~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 174 ikp~NIll~~~~~~~~~kl~Dfg~a~ 199 (349)
T 2w4o_A 174 LKPENLLYATPAPDAPLKIADFGLSK 199 (349)
T ss_dssp CCGGGEEESSSSTTCCEEECCCC---
T ss_pred CCcccEEEecCCCCCCEEEccCcccc
Confidence 999999963 48999999764
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=2.1e-09 Score=124.34 Aligned_cols=136 Identities=15% Similarity=0.131 Sum_probs=93.2
Q ss_pred CcccccccceEEEEEEe---cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 408 ENPIAAASLAQVFRAVT---KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l---~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
.+.||.|++|.||+|.. .+|+.||||+.++..... .. .-.+.
T Consensus 22 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~-----------------------------~~------~~~~~ 66 (291)
T 1xbb_A 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP-----------------------------AL------KDELL 66 (291)
T ss_dssp EEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----C-----------------------------HH------HHHHH
T ss_pred cCccccccCeeeEeeeecCCCceeeEEEEeecccccCH-----------------------------HH------HHHHH
Confidence 35899999999999964 357899999987542110 00 01245
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++ .+...+.+-.++ .....++||||++|.+|.++.. ....++...+...+.+++ +..+|..|++
T Consensus 67 ~e~~~l~~l----~h~~i~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~ 139 (291)
T 1xbb_A 67 AEANVMQQL----DNPYIVRMIGIC--EAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLEESNFV 139 (291)
T ss_dssp HHHHHHHTC----CCTTBCCEEEEE--ESSSEEEEEECCTTEEHHHHHH-HCTTCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhC----CCCCEEEEEEEE--CCCCcEEEEEeCCCCCHHHHHH-hCcCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 566555554 233323333333 2345689999999999988743 223477777766666665 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.||++. .++++|||...
T Consensus 140 H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 140 HRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp CSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred cCCCCcceEEEeCCCcEEEccCCcce
Confidence 999999999964 58999999764
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=98.98 E-value=1.4e-09 Score=128.73 Aligned_cols=137 Identities=18% Similarity=0.174 Sum_probs=93.3
Q ss_pred cccccccceEEEEEEe--------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT--------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQE 480 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l--------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 480 (1578)
+.||.|++|+||+|+. .+|+.||||+.++..... + .
T Consensus 41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~---------------------------------~ 84 (334)
T 2pvf_A 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---D---------------------------------L 84 (334)
T ss_dssp EEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHH---H---------------------------------H
T ss_pred eEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHH---H---------------------------------H
Confidence 7899999999999986 357899999987543211 0 0
Q ss_pred HhHHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------cCCCHHHH
Q psy12972 481 LDFLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------------KGFSLADV 544 (1578)
Q Consensus 481 lDf~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------------~~~~~~~v 544 (1578)
-++.+|++.+.++. .++. +.+-..+ .....-+|||||++|.+|.++..-.. ..++...+
T Consensus 85 ~~~~~E~~~l~~l~----~hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
T 2pvf_A 85 SDLVSEMEMMKMIG----KHKNIINLLGAC-TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159 (334)
T ss_dssp HHHHHHHHHHHHHC----CCTTBCCEEEEE-CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHH
T ss_pred HHHHHHHHHHHHhh----cCCCEeeEEEEE-ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHH
Confidence 12456666666652 2332 2222222 22345689999999999988743211 13666666
Q ss_pred HHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 545 DRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 545 ~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
...+.+++ +..+|..|++|+|++|.||++. .++++|||....
T Consensus 160 ~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~ 206 (334)
T 2pvf_A 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206 (334)
T ss_dssp HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEcccccccc
Confidence 66666655 7889999999999999999964 599999997643
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=98.98 E-value=8e-10 Score=132.99 Aligned_cols=135 Identities=18% Similarity=0.233 Sum_probs=88.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|+||+|+.. +|+.||||+........ ... -.+.+|+
T Consensus 31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~-----------------------------~~~------~~~~~E~ 75 (367)
T 1cm8_A 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSE-----------------------------LFA------KRAYREL 75 (367)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTTSSH-----------------------------HHH------HHHHHHH
T ss_pred EEeeecCCeEEEEEEECCCCCEEEEEEeCccccCH-----------------------------HHH------HHHHHHH
Confidence 68999999999999964 79999999875432110 000 1234556
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-----CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-----STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-----t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.+.+++ +...+.+-.++..-. +.-+|||||+ |..|.++. ....++...+...+.+++ +..+|..|
T Consensus 76 ~~l~~l~----hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~--~~~~l~~~~~~~~~~qi~~~L~~LH~~~ 148 (367)
T 1cm8_A 76 RLLKHMR----HENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLM--KHEKLGEDRIQFLVYQMLKGLRYIHAAG 148 (367)
T ss_dssp HHHHHCC----BTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCC----CcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 5565543 333344444443221 2348999999 77887763 345677777766666665 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|+||+|||+. .++++|||...
T Consensus 149 ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 149 IIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred ccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 99999999999965 59999999764
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=98.98 E-value=1.1e-09 Score=125.35 Aligned_cols=135 Identities=18% Similarity=0.127 Sum_probs=93.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+..+.-.... .-.+.+|+
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~~~~e~ 56 (276)
T 2yex_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC------------------------------------PENIKKEI 56 (276)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTH------------------------------------HHHHHHHH
T ss_pred EEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhh------------------------------------hHHHHHHH
Confidence 67999999999999976 799999999865321100 01234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+..-+.+-.++. .....+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 57 ~~l~~l----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 130 (276)
T 2yex_A 57 CINKML----NHENVVKFYGHRR-EGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 130 (276)
T ss_dssp HHHHTC----CCTTBCCEEEEEE-ETTEEEEEEECCTTEEGGGGSB-TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHhc----CCCCceeeeeEEE-cCCEEEEEEEecCCCcHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence 444443 2222233323322 2344579999999999988743 223577777666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 131 l~p~Nil~~~~~~~kl~dfg~~~ 153 (276)
T 2yex_A 131 IKPENLLLDERDNLKISDFGLAT 153 (276)
T ss_dssp CSGGGEEECTTCCEEECCCTTCE
T ss_pred CChHHEEEccCCCEEEeeCCCcc
Confidence 999999964 59999999764
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=98.98 E-value=1.1e-09 Score=130.77 Aligned_cols=148 Identities=14% Similarity=0.119 Sum_probs=98.0
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.+.|.-. +.||.|++|.||+|+.+ +|+.||||+....-... .+...
T Consensus 22 ~~~~y~~~--~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------------~~~~~------------ 69 (351)
T 3c0i_A 22 FEDVYELC--EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTS------------------SPGLS------------ 69 (351)
T ss_dssp HHHHEEEE--EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHT------------------SSSCC------------
T ss_pred cccceEEe--eEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccc------------------cccch------------
Confidence 44555554 67999999999999965 79999999986432110 00001
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---cCCCHHHHHHHHHHHH--
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---KGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---~~~~~~~v~~~l~~~~-- 552 (1578)
.-++.+|++.+.++ .+...+.+-.++.+ ...-+|||||++|.+|.+...-.. ..++...+...+.+++
T Consensus 70 --~~~~~~E~~~l~~l----~hpnIv~~~~~~~~-~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~a 142 (351)
T 3c0i_A 70 --TEDLKREASICHML----KHPHIVELLETYSS-DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142 (351)
T ss_dssp --HHHHHHHHHHHHHC----CCTTBCCEEEEEEE-TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHhC----CCCCCCcEEEEEEe-CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHH
Confidence 11245666666554 23332333333322 345689999999999976543221 1356666666555555
Q ss_pred HHHHHHcCccccCCCCCCCCCC------eeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~------~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.|||+. .++++|||...
T Consensus 143 l~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~ 181 (351)
T 3c0i_A 143 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAI 181 (351)
T ss_dssp HHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCE
T ss_pred HHHHHHCCceeccCChHHeEEecCCCCCcEEEecCccee
Confidence 7889999999999999999974 28999999764
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=98.98 E-value=8.3e-10 Score=131.84 Aligned_cols=126 Identities=13% Similarity=0.049 Sum_probs=83.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+..-.. .-++..|+
T Consensus 41 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------------------------------------~~~~~~e~ 82 (360)
T 3llt_A 41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKY--------------------------------------TRSAKIEA 82 (360)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSCHHH--------------------------------------HHHHHHHH
T ss_pred EEEcccCCeEEEEEEECCCCeEEEEEEeccchhh--------------------------------------hhhhHHHH
Confidence 68999999999999974 7999999998632110 01123455
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.++++...-..++. +.+-..+. .....+|||||+ |.+|.++..... .+++...+...+.+++ +..+|..|++|
T Consensus 83 ~~l~~l~~~~~~h~~iv~~~~~~~-~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 160 (360)
T 3llt_A 83 DILKKIQNDDINNNNIVKYHGKFM-YYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTH 160 (360)
T ss_dssp HHHHHTCCCSTTGGGBCCEEEEEE-ETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHhcccCCCCCCeecccceee-ECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 555555421111222 22222222 234568999999 888887744222 2477777776666665 88899999999
Q ss_pred cCCCCCCCCCC
Q psy12972 564 ADPHSGNDVNT 574 (1578)
Q Consensus 564 ~DpHPGNilv~ 574 (1578)
+|+||.|||+.
T Consensus 161 rDlkp~NIll~ 171 (360)
T 3llt_A 161 TDLKPENILLD 171 (360)
T ss_dssp SCCSGGGEEES
T ss_pred CCCCcccEEEc
Confidence 99999999973
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=1.1e-09 Score=128.64 Aligned_cols=141 Identities=15% Similarity=0.153 Sum_probs=94.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+.....- . ........++.+|+
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~---------------------------~~~~~~~~~~~~E~ 66 (322)
T 2ycf_A 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIG--S---------------------------AREADPALNVETEI 66 (322)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECC--------------------------------------------CHHHHH
T ss_pred eEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhc--c---------------------------cccchhhhhHHHHH
Confidence 67999999999999965 789999999865421100 0 00001123456777
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 67 ~~l~~l~----h~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~d 139 (322)
T 2ycf_A 67 EILKKLN----HPCIIKIKNFFD--AEDYYIVLELMEGGELFDKVV-GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRD 139 (322)
T ss_dssp HHHHHCC----CTTBCCEEEEEE--SSSEEEEEECCTTEETHHHHS-TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhCC----CCCCceEeeEEc--CCceEEEEecCCCCcHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 7776652 333344444443 234689999999999987642 234567766666665555 7889999999999
Q ss_pred CCCCCCCCC------eeEEecCCchh
Q psy12972 566 PHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~------~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 140 lkp~NIl~~~~~~~~~~kl~Dfg~~~ 165 (322)
T 2ycf_A 140 LKPENVLLSSQEEDCLIKITDFGHSK 165 (322)
T ss_dssp CSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred CCHHHEEEecCCCCCeEEEccCccce
Confidence 999999974 28999999753
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=4.9e-10 Score=141.76 Aligned_cols=139 Identities=17% Similarity=0.143 Sum_probs=87.3
Q ss_pred cccCCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 404 RSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 404 ~~fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
..+..+.||.|++|+||+| ...|+.||+|+..+.....- .+-+.. ..-.|
T Consensus 337 ~~~~~~~LG~G~fg~Vy~~-~~~~~~~~~k~~~~~~~~~~------------------------~~~~~~-----~~~~~ 386 (540)
T 3en9_A 337 RKIPEHLIGKGAEADIKRD-SYLDFDVIIKERVKKGYRDE------------------------RLDENI-----RKSRT 386 (540)
T ss_dssp -----------CCEEEEEE-ECSSCEEEEEEECCCTTSCH------------------------HHHHHH-----HHHHH
T ss_pred cCCCCCEEeeCCCEEEEEE-EECCCeEEEEEEecccccch------------------------hhhhHH-----HHHHH
Confidence 3355679999999999999 45789999998765321110 000000 11246
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVH 563 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH 563 (1578)
.+|++.+.+++ ++.|..|..+.......+|||||++|.+|.++.. . ...++..+++. ++.+|..|++|
T Consensus 387 ~~E~~il~~l~-----h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~--~----~~~i~~qi~~a-L~~LH~~gIiH 454 (540)
T 3en9_A 387 AREARYLALVK-----DFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIE--D----NLDIAYKIGEI-VGKLHKNDVIH 454 (540)
T ss_dssp HHHHHHHHHGG-----GGTCCCCCEEEEETTTTEEEEECCCSEEHHHHST--T----CTHHHHHHHHH-HHHHHHTTEEC
T ss_pred HHHHHHHHhcC-----CCCcCceEEEEEeCCccEEEEECCCCCCHHHHHH--H----HHHHHHHHHHH-HHHHHHCcCcc
Confidence 78888888874 3556666777666667799999999999988633 1 22344444443 78899999999
Q ss_pred cCCCCCCCCCC-eeEEecCCch
Q psy12972 564 ADPHSGNDVNT-WLYPVDLGDK 584 (1578)
Q Consensus 564 ~DpHPGNilv~-~v~liDfG~~ 584 (1578)
+|+||.|||+. .++++|||..
T Consensus 455 rDiKp~NILl~~~~kL~DFGla 476 (540)
T 3en9_A 455 NDLTTSNFIFDKDLYIIDFGLG 476 (540)
T ss_dssp TTCCTTSEEESSSEEECCCTTC
T ss_pred CCCCHHHEEECCeEEEEECccC
Confidence 99999999965 3555555543
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=1.2e-09 Score=125.94 Aligned_cols=135 Identities=14% Similarity=0.106 Sum_probs=93.6
Q ss_pred cccccccceEEEEEEec-CC-------CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EG-------VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQE 480 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G-------~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 480 (1578)
+.||.|++|.||+|+.. +| +.||||+....-... .
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~-------------------------------------~ 56 (289)
T 4fvq_A 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNY-------------------------------------S 56 (289)
T ss_dssp EEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGG-------------------------------------H
T ss_pred eeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHH-------------------------------------H
Confidence 67999999999999865 34 579999986532211 0
Q ss_pred HhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 481 LDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 481 lDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
-.|.+|++.+.++. +..-+.+-.++. .....+|||||++|.+|.++..-....++...+...+.+++ +..+|.
T Consensus 57 ~~~~~E~~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~ 131 (289)
T 4fvq_A 57 ESFFEAASMMSKLS----HKHLVLNYGVCV-CGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEE 131 (289)
T ss_dssp HHHHHHHHHHHTSC----CTTBCCEEEEEC-CTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC----CCCEeEEEEEEE-eCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 12355665555543 322233333332 24556899999999999987553333477777666666655 788999
Q ss_pred cCccccCCCCCCCCCC---e--------eEEecCCchh
Q psy12972 559 TGFVHADPHSGNDVNT---W--------LYPVDLGDKF 585 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~--------v~liDfG~~~ 585 (1578)
.|++|+|++|.|||+. . ++++|||...
T Consensus 132 ~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~ 169 (289)
T 4fvq_A 132 NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISI 169 (289)
T ss_dssp TTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCT
T ss_pred CCeECCCcCcceEEEecCCcccccccceeeeccCcccc
Confidence 9999999999999963 2 7888888653
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.2e-09 Score=126.11 Aligned_cols=144 Identities=15% Similarity=0.090 Sum_probs=97.8
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.+.|.-. +.||.|++|.||+|+.+ +|+.||||+........ ..
T Consensus 20 i~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----------------------~~----------- 64 (285)
T 3is5_A 20 IDDLFIFK--RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQV----------------------PM----------- 64 (285)
T ss_dssp HHHHEEEE--EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCS----------------------CH-----------
T ss_pred hhhheeec--ceeccCCCeEEEEEEEccCCceEEEEEeeccccch----------------------hH-----------
Confidence 34445443 78999999999999965 79999999986542110 00
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH---hhcCCCHHHHHHHHHHHH--
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL---LEKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l---~~~~~~~~~v~~~l~~~~-- 552 (1578)
-.+.+|++.+.++ .+...+.+-.++. .....+|||||++|.+|.+...- ....++...+...+.+++
T Consensus 65 ---~~~~~E~~~l~~l----~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~ 136 (285)
T 3is5_A 65 ---EQIEAEIEVLKSL----DHPNIIKIFEVFE-DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA 136 (285)
T ss_dssp ---HHHHHHHHHHHTC----CCTTBCCEEEEEE-CSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHhC----CCchHHhHHHhee-cCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHH
Confidence 1234555555554 2322233323332 23456899999999998876432 124577777666666655
Q ss_pred HHHHHHcCccccCCCCCCCCC------CeeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVN------TWLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv------~~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.||++ +.++++|||...
T Consensus 137 L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 137 LAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp HHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred HHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 788999999999999999997 248999999764
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=1.3e-09 Score=124.94 Aligned_cols=134 Identities=19% Similarity=0.139 Sum_probs=94.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+..+...... -.+.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~-------------------------------------~~~~~E~ 57 (277)
T 3f3z_A 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDV-------------------------------------DRFKQEI 57 (277)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCH-------------------------------------HHHHHHH
T ss_pred eEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchH-------------------------------------HHHHHHH
Confidence 57999999999999975 688999999865432210 0134566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+..-+.+-..+ ......+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 58 ~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~d 131 (277)
T 3f3z_A 58 EIMKSL----DHPNIIRLYETF-EDNTDIYLVMELCTGGELFERVV-HKRVFRESDAARIMKDVLSAVAYCHKLNVAHRD 131 (277)
T ss_dssp HHHHTC----CCTTBCCEEEEE-ECSSEEEEEEECCCSCBHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhC----CCCCEeeEEEEE-ecCCeEEEEEeccCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCC
Confidence 655554 222222222222 22345689999999999977643 334567777766666665 7889999999999
Q ss_pred CCCCCCCC---C---eeEEecCCchh
Q psy12972 566 PHSGNDVN---T---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv---~---~v~liDfG~~~ 585 (1578)
++|.||++ . .++++|||...
T Consensus 132 lkp~Nil~~~~~~~~~~~l~Dfg~~~ 157 (277)
T 3f3z_A 132 LKPENFLFLTDSPDSPLKLIDFGLAA 157 (277)
T ss_dssp CSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred CCHHHEEEecCCCCCcEEEEecccce
Confidence 99999997 2 58999999764
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.9e-09 Score=123.55 Aligned_cols=149 Identities=19% Similarity=0.165 Sum_probs=99.4
Q ss_pred hCCChhhhccccCCcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHH
Q psy12972 395 FGCTHSQLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINEL 473 (1578)
Q Consensus 395 lG~~~~~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 473 (1578)
.|..+++ |.-. +.||.|++|+||+|+. .+|+.||||+..+..... . +.
T Consensus 6 ~g~~~~~-y~~~--~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~--------------------------~~ 54 (278)
T 3cok_A 6 IGEKIED-FKVG--NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK--A--------------------------GM 54 (278)
T ss_dssp HCSSGGG-EEEE--EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--T--------------------------TC
T ss_pred ccccccc-ceee--eeecCCCceEEEEEEEccCCceEEEEEeehhhhhh--h--------------------------hH
Confidence 4555544 3333 6899999999999996 589999999986532110 0 00
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH-
Q psy12972 474 KVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF- 552 (1578)
Q Consensus 474 ~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~- 552 (1578)
.-.+.+|++.+.++ .+...+.+-..+ ......+|||||++|.+|.+...-....++...+...+.+++
T Consensus 55 ------~~~~~~e~~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~ 123 (278)
T 3cok_A 55 ------VQRVQNEVKIHCQL----KHPSILELYNYF-EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIIT 123 (278)
T ss_dssp ------HHHHHHHHHHHTTB----CCTTBCCEEEEE-ECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHhC----CCCCeEeEEEEE-ccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence 01234555544443 232223332333 223456899999999999877442234577777766666665
Q ss_pred -HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 553 -AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 553 -l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.||++. .++++|||...
T Consensus 124 ~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~ 160 (278)
T 3cok_A 124 GMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLAT 160 (278)
T ss_dssp HHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCE
T ss_pred HHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeeccee
Confidence 7889999999999999999964 58999999754
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.2e-09 Score=132.65 Aligned_cols=137 Identities=20% Similarity=0.126 Sum_probs=94.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+...... . .-.+.+|+
T Consensus 15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~---------------------------------~~~~~~E~ 58 (396)
T 4eut_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR---P---------------------------------VDVQMREF 58 (396)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS---C---------------------------------HHHHHHHH
T ss_pred EEEEcCCCeEEEEEEECCCCcEEEEEEeccccccc---h---------------------------------HHHHHHHH
Confidence 57999999999999976 69999999986432110 0 00124566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC-ceEEEEeccCCCcCCchhhHhh--cCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS-TRVLTTEFIDGVKISDKEGLLE--KGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t-~~VLVME~i~G~~l~d~~~l~~--~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+.+.++. +...+.+-.++.+... ..+|||||++|.+|.++..... .+++...+...+.+++ +..+|..|++
T Consensus 59 ~~l~~l~----hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv 134 (396)
T 4eut_A 59 EVLKKLN----HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134 (396)
T ss_dssp HHHHHCC----CTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHhcC----CCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 6665553 3333333334433322 4589999999999988744222 2377777777666666 7889999999
Q ss_pred ccCCCCCCCCC----C---eeEEecCCchh
Q psy12972 563 HADPHSGNDVN----T---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv----~---~v~liDfG~~~ 585 (1578)
|+|++|.|||+ . .++++|||...
T Consensus 135 H~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp CCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred ECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999996 2 37889999763
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=1.9e-09 Score=124.86 Aligned_cols=143 Identities=16% Similarity=0.119 Sum_probs=97.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.++.-..... . .-.....+ .+.+|+
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~---------------------~-~~~~~~~~------~~~~e~ 74 (298)
T 1phk_A 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFS---------------------A-EEVQELRE------ATLKEV 74 (298)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCC---------------------H-HHHHHHHH------HHHHHH
T ss_pred eeecCCCceEEEEEEEcCcCceEEEEEEecccccccC---------------------H-HHHHHHHH------HHHHHH
Confidence 68999999999999975 7999999998754321100 0 00111111 235566
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +++. +.+-.++ ......+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+
T Consensus 75 ~~l~~l~----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~ 148 (298)
T 1phk_A 75 DILRKVS----GHPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDYLT-EKVTLSEKETRKIMRALLEVICALHKLNIVHR 148 (298)
T ss_dssp HHHHHHT----TCTTBCCEEEEE-ECSSEEEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred HHHHHhc----CCCCEeeeeeee-ccCCeEEEEEeccCCCcHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 6666653 2232 3333333 22345689999999999988743 234677777766666665 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.||++. .++++|||...
T Consensus 149 dl~p~Nil~~~~~~~kl~dfg~~~ 172 (298)
T 1phk_A 149 DLKPENILLDDDMNIKLTDFGFSC 172 (298)
T ss_dssp CCSGGGEEECTTCCEEECCCTTCE
T ss_pred CCCcceEEEcCCCcEEEecccchh
Confidence 9999999964 58999999764
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.8e-09 Score=125.96 Aligned_cols=143 Identities=15% Similarity=0.109 Sum_probs=93.1
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.+..-..... ... ..++.+|.
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------~~~---------------~~~~~~e~ 62 (308)
T 3g33_A 15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGG-----------------GGL---------------PISTVREV 62 (308)
T ss_dssp EEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTS-----------------SCC---------------CHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEecccccccc-----------------ccc---------------chhHHHHH
Confidence 6799999999999996 58999999998643211000 000 01223445
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC----ceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS----TRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t----~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.++++.. +.+...+.+-.++....+ .-+|||||++| .|.+..... ..+++...+...+.+++ +..+|..|
T Consensus 63 ~~l~~l~~-~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ 140 (308)
T 3g33_A 63 ALLRRLEA-FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC 140 (308)
T ss_dssp HHHHHHHH-HCCTTBCCEEEEEEECCSSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhh-cCCCCeEEeeeeeeccCCCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 55555543 233333444444433222 24799999987 666653211 12377777766666665 88999999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|+||+|||+. .++++|||...
T Consensus 141 ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 168 (308)
T 3g33_A 141 IVHRDLKPENILVTSGGTVKLADFGLAR 168 (308)
T ss_dssp CCCSCCCTTTEEECTTSCEEECSCSCTT
T ss_pred cccCCCCHHHEEEcCCCCEEEeeCcccc
Confidence 99999999999964 58999999764
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=98.97 E-value=6.4e-10 Score=128.80 Aligned_cols=136 Identities=18% Similarity=0.096 Sum_probs=91.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+......- . .-.+.+|+
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------~------~~~~~~E~ 52 (292)
T 3o0g_A 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEG-----------------------------V------PSSALREI 52 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTT-----------------------------H------HHHHHHHH
T ss_pred eEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCC-----------------------------c------chHHHHHH
Confidence 57999999999999975 799999999865322110 0 01123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+..-+.+-.++. ....-+|||||++|..+..+ ......++...+...+.+++ +..+|..|++|+|
T Consensus 53 ~~l~~l----~h~~iv~~~~~~~-~~~~~~lv~e~~~~~l~~~~-~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~d 126 (292)
T 3o0g_A 53 CLLKEL----KHKNIVRLHDVLH-SDKKLTLVFEFCDQDLKKYF-DSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRD 126 (292)
T ss_dssp HHHTTC----CCTTBCCEEEEEE-ETTEEEEEEECCSEEHHHHH-HHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHhcC----CCCCEeeEEeEEE-eCCEEEEEEecCCCCHHHHH-HhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 555444 2333233333332 23456899999988443332 22235677777766666665 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 127 ikp~Nil~~~~~~~kl~Dfg~~~ 149 (292)
T 3o0g_A 127 LKPQNLLINRNGELKLANFGLAR 149 (292)
T ss_dssp CSGGGEEECTTSCEEECCCTTCE
T ss_pred CCHHHEEEcCCCCEEEeecccce
Confidence 999999964 58999999764
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=98.97 E-value=8.1e-10 Score=132.00 Aligned_cols=149 Identities=14% Similarity=0.172 Sum_probs=99.3
Q ss_pred hCCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHH
Q psy12972 395 FGCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINEL 473 (1578)
Q Consensus 395 lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 473 (1578)
.|.-..+-|... +.||.|++|.||+|+.. +|+.||||+.+.......
T Consensus 27 ~~~~~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~------------------------------ 74 (360)
T 3eqc_A 27 VGELKDDDFEKI--SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI------------------------------ 74 (360)
T ss_dssp CCCCCGGGEEEE--EEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHH------------------------------
T ss_pred ccccccccceee--eeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHH------------------------------
Confidence 344344445554 67999999999999976 799999999876532210
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH-
Q psy12972 474 KVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF- 552 (1578)
Q Consensus 474 ~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~- 552 (1578)
. -.+.+|++.+.++ .+...+.+-..+. .....+|||||++|.+|.++.. ....++...+...+.+++
T Consensus 75 ~------~~~~~E~~~l~~l----~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~~i~~ 142 (360)
T 3eqc_A 75 R------NQIIRELQVLHEC----NSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIK 142 (360)
T ss_dssp H------HHHHHHHGGGGGC----CCTTBCCEEEEEE-ETTEEEEEECCCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHH
T ss_pred H------HHHHHHHHHHHHC----CCCCEEEEeEEEE-ECCEEEEEEECCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHH
Confidence 0 1124444444433 2222233323322 2345689999999999988753 234567666666555555
Q ss_pred -HHHHHH-cCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 553 -AEQIFQ-TGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 553 -l~~i~~-~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+..+|. +|++|+|+||.|||+. .++++|||....+
T Consensus 143 ~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 182 (360)
T 3eqc_A 143 GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 182 (360)
T ss_dssp HHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred HHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccc
Confidence 677887 4999999999999964 5999999987544
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.8e-09 Score=128.27 Aligned_cols=136 Identities=16% Similarity=0.146 Sum_probs=94.4
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|...+|+.||||+........- ..-.+.+|++
T Consensus 15 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~~E~~ 59 (343)
T 3dbq_A 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQ-----------------------------------TLDSYRNEIA 59 (343)
T ss_dssp EEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHH-----------------------------------HHHHHHHHHH
T ss_pred EEEecCCCeEEEEEEeCCCCEEEEEEeeccccchH-----------------------------------HHHHHHHHHH
Confidence 68999999999999999999999999864321100 0013466777
Q ss_pred HHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
.+.++.+ +.+. |++++. .....-+||||+ .|.+|.++.. ....++...+...+.+++ +..+|..|++|+
T Consensus 60 ~l~~l~~---~~~~--iv~~~~~~~~~~~~~lv~e~-~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHr 132 (343)
T 3dbq_A 60 YLNKLQQ---HSDK--IIRLYDYEITDQYIYMVMEC-GNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHS 132 (343)
T ss_dssp HHHHHTT---TCTT--BCCEEEEEECSSEEEEEECC-CSEEHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHhhhh---cCCc--eEEEeeeEeeCCEEEEEEeC-CCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 7777653 1122 233332 223445799995 4667777643 234577776666666655 788999999999
Q ss_pred CCCCCCCCCC--eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT--WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~--~v~liDfG~~~~ 586 (1578)
|+||.|||+. .++++|||....
T Consensus 133 Dikp~NIll~~~~~kl~DFG~a~~ 156 (343)
T 3dbq_A 133 DLKPANFLIVDGMLKLIDFGIANQ 156 (343)
T ss_dssp CCCGGGEEEETTEEEECCCSSSCC
T ss_pred CCCcceEEEECCcEEEeecccccc
Confidence 9999999964 699999997643
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=1e-09 Score=134.91 Aligned_cols=137 Identities=15% Similarity=0.122 Sum_probs=94.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+....... ..-.+.+|+
T Consensus 32 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~-----------------------------------~~~~~~~E~ 76 (432)
T 3n9x_A 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLI-----------------------------------DCKRILREI 76 (432)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHH-----------------------------------HHHHHHHHH
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChH-----------------------------------HHHHHHHHH
Confidence 68999999999999965 789999999865332110 011235566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC----CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS----STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~----t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+.+.+++ +...+.+-.++.... ..-+|||||++| .|.++.. ....++...+...+.+++ ++.+|..|+
T Consensus 77 ~~l~~l~----h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~gi 150 (432)
T 3n9x_A 77 TILNRLK----SDYIIRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFK-TPIFLTEEHIKTILYNLLLGENFIHESGI 150 (432)
T ss_dssp HHHHHCC----CTTBCCEEEECCCSCTTTCCCEEEEEECCSE-EHHHHHH-SSCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHcC----CCCcceEEEEEecCCCCcCCeEEEEEecCCc-CHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 6666653 333333333332221 345899999976 6665532 223477777776666666 889999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|+||+|||+. .++++|||....
T Consensus 151 vHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 151 IHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp ECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred CCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 9999999999965 599999997643
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.6e-09 Score=127.79 Aligned_cols=136 Identities=15% Similarity=0.059 Sum_probs=95.6
Q ss_pred cccccccceEEEEEEe-----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVT-----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|+||+|+. .+|+.||||+.++..... .-.+
T Consensus 47 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------------------------------~~~~ 89 (326)
T 2w1i_A 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH-------------------------------------LRDF 89 (326)
T ss_dssp EEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHH-------------------------------------HHHH
T ss_pred eeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHH-------------------------------------HHHH
Confidence 6799999999999983 479999999987642210 0124
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|++.+.++. +...+.+-.++.... ..-+|||||++|.+|.++..-....++...+...+.+++ +..+|..|
T Consensus 90 ~~E~~~l~~l~----h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 165 (326)
T 2w1i_A 90 EREIEILKSLQ----HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 165 (326)
T ss_dssp HHHHHHHHTCC----CTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCC----CCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 55666665542 332233333332221 245799999999999987543334577777777666665 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.||++. .++++|||...
T Consensus 166 ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 166 YIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp EECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred EeccCCCcceEEEcCCCcEEEecCcchh
Confidence 99999999999964 69999999764
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=7.7e-10 Score=133.35 Aligned_cols=128 Identities=14% Similarity=0.074 Sum_probs=84.5
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+. .+|+.||||+.+..-.. .-.+.+|+
T Consensus 43 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------------------------------------~~~~~~E~ 84 (397)
T 1wak_A 43 RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHY--------------------------------------TETALDEI 84 (397)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCHHH--------------------------------------HHHHHHHH
T ss_pred EEeeecCCeeEEEEEecCCCeEEEEEEEecCCcc--------------------------------------hHHHHHHH
Confidence 5799999999999985 47999999998643110 01235667
Q ss_pred HHHHHHHHhhCCCC-CeeecEEeeCC------CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 488 RNAERCSKDLAHLP-YVYIPRILWDK------SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~-~v~vP~v~~~~------~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
+.+.+++......+ ...|.+++..+ ...-+|||||+.|..+..+......+++...+...+.+++ +..+|.
T Consensus 85 ~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~ 164 (397)
T 1wak_A 85 RLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHT 164 (397)
T ss_dssp HHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 77777764321111 11233333221 2345799999966555444322224577777777666666 788999
Q ss_pred c-CccccCCCCCCCCCC
Q psy12972 559 T-GFVHADPHSGNDVNT 574 (1578)
Q Consensus 559 ~-G~vH~DpHPGNilv~ 574 (1578)
. |++|+|+||+|||+.
T Consensus 165 ~~givHrDikp~NIll~ 181 (397)
T 1wak_A 165 KCRIIHTDIKPENILLS 181 (397)
T ss_dssp TTCEECCCCSGGGEEEC
T ss_pred hCCEecCCCCHHHeeEe
Confidence 8 999999999999974
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=98.96 E-value=2e-09 Score=125.94 Aligned_cols=138 Identities=14% Similarity=0.099 Sum_probs=92.8
Q ss_pred CcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 408 ENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
.+.||.|++|.||+|+. .+|+.||||+....-... .-.+.+|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------------------------------------~~~~~~E 60 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHI-------------------------------------RSRVFRE 60 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCC-------------------------------------HHHHHHH
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchh-------------------------------------HHHHHHH
Confidence 46799999999999995 489999999986431110 0112445
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
++.+.++ ..+..-+.+-.++. ....-+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+
T Consensus 61 ~~~l~~~---~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~ 135 (316)
T 2ac3_A 61 VEMLYQC---QGHRNVLELIEFFE-EEDRFYLVFEKMRGGSILSHIH-KRRHFNELEASVVVQDVASALDFLHNKGIAHR 135 (316)
T ss_dssp HHHHHHT---CCCTTBCCEEEEEE-ETTEEEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHh---cCCCCeeeEEEEEe-eCCEEEEEEEcCCCCcHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCceeC
Confidence 5554443 12222233333332 2345689999999999988743 234577776666666555 788999999999
Q ss_pred CCCCCCCCCC---e---eEEecCCchhhh
Q psy12972 565 DPHSGNDVNT---W---LYPVDLGDKFRL 587 (1578)
Q Consensus 565 DpHPGNilv~---~---v~liDfG~~~~l 587 (1578)
|++|.|||+. . ++++|||....+
T Consensus 136 dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~ 164 (316)
T 2ac3_A 136 DLKPENILCEHPNQVSPVKICDFDLGSGI 164 (316)
T ss_dssp CCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred CCCHHHEEEccCCCcCceEEEEccCcccc
Confidence 9999999964 2 899999976443
|
| >3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.96 E-value=2.1e-10 Score=113.11 Aligned_cols=94 Identities=17% Similarity=0.220 Sum_probs=76.8
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchh----hHhHcCccccCCcEE
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQG----LARRLGVGSQLPQIA 934 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~----L~~k~gV~~~~PTl~ 934 (1578)
|.++|++.+ +.++|++|.|+|+|||+|+.+.|.|+++++. + ++.+++||.+++++ +|.++||+...||++
T Consensus 13 s~e~f~~ii---~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~-~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~i 86 (112)
T 3iv4_A 13 SIDQFEQVI---EENKYVFVLKHSETCPISANAYDQFNKFLYE--R-DMDGYYLIVQQERDLSDYIAKKTNVKHESPQAF 86 (112)
T ss_dssp SHHHHHHHH---HHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--H-TCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEEE
T ss_pred CHHHHHHHH---hcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--C-CceEEEEEeecCchhhHHHHHHhCCccCCCeEE
Confidence 556787765 2389999999999999999999999999985 2 38999999999876 899999992289999
Q ss_pred EEcCCccccc-cCCCCCHHHHHHHH
Q psy12972 935 LLTDGRTSFF-KEPSFSVQKMVEFF 958 (1578)
Q Consensus 935 lf~~G~~~~y-~~G~~s~~~L~~fi 958 (1578)
+|++|+.+.. ..+..+.+.|.+.+
T Consensus 87 l~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 87 YFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp EEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred EEECCEEEEEeeccccCHHHHHHhh
Confidence 9999987633 33667777777654
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=98.96 E-value=1.2e-09 Score=125.95 Aligned_cols=134 Identities=19% Similarity=0.155 Sum_probs=94.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+++... .-.+.+|+
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------------------------------------~~~~~~E~ 60 (288)
T 3kfa_A 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--------------------------------------VEEFLKEA 60 (288)
T ss_dssp EESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTH--------------------------------------HHHHHHHH
T ss_pred eecCCCCceeEEEeEecCCCEEEEEEecCcCHHH--------------------------------------HHHHHHHH
Confidence 67999999999999976 5899999998653211 01235566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.+++ +...+.+-.++ ......++||||++|.+|.++..-. ...++...+...+.+++ +..+|..|++|+
T Consensus 61 ~~l~~l~----h~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~ 135 (288)
T 3kfa_A 61 AVMKEIK----HPNLVQLLGVC-TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135 (288)
T ss_dssp HHHHHCC----CTTBCCEEEEE-CSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred HHHHhCC----CCCEeeEEEEE-ccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCC
Confidence 6666653 22223333333 2234568999999999998874321 23366666666555555 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.||+++ .++++|||...
T Consensus 136 dikp~Nil~~~~~~~~l~Dfg~~~ 159 (288)
T 3kfa_A 136 DLAARNCLVGENHLVKVADFGLSR 159 (288)
T ss_dssp CCSGGGEEECGGGCEEECCCCGGG
T ss_pred CCCcceEEEcCCCCEEEccCccce
Confidence 9999999975 58999999764
|
| >1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1 | Back alignment and structure |
|---|
Probab=98.96 E-value=1e-09 Score=100.68 Aligned_cols=73 Identities=22% Similarity=0.360 Sum_probs=64.0
Q ss_pred EEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCC-CHHHHH
Q psy12972 877 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSF-SVQKMV 955 (1578)
Q Consensus 877 LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~-s~~~L~ 955 (1578)
.|.||++||++|+.+.|.++++++.+.+. +.++.|| +.+++++|+|.+ +||+++ +|+.... |.. +.++|.
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~-~~~~~v~---~~~~~~~~~v~~-~Pt~~~--~G~~~~~--G~~~~~~~l~ 73 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGID-AEFEKIK---EMDQILEAGLTA-LPGLAV--DGELKIM--GRVASKEEIK 73 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCC-EEEEEEC---SHHHHHHHTCSS-SSCEEE--TTEEEEC--SSCCCHHHHH
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCc-eEEEEec---CHHHHHHCCCCc-CCEEEE--CCEEEEc--CCCCCHHHHH
Confidence 58999999999999999999999998764 8999998 789999999998 999998 8876544 777 888888
Q ss_pred HHH
Q psy12972 956 EFF 958 (1578)
Q Consensus 956 ~fi 958 (1578)
+++
T Consensus 74 ~~l 76 (77)
T 1ilo_A 74 KIL 76 (77)
T ss_dssp HHC
T ss_pred HHh
Confidence 875
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=7.3e-10 Score=127.22 Aligned_cols=134 Identities=18% Similarity=0.130 Sum_probs=91.5
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+. +|+.||||+.++.... -.|.+|++
T Consensus 27 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~---------------------------------------~~~~~E~~ 66 (278)
T 1byg_A 27 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA---------------------------------------QAFLAEAS 66 (278)
T ss_dssp EEEEECSSCEEEEEEE-TTEEEEEEECCCCC-----------------------------------------HHHHHTHH
T ss_pred eEEecCCCceEEEEEE-cCCEEEEEEecchhHH---------------------------------------HHHHHHHH
Confidence 6899999999999986 5999999998643110 02345555
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++ .+...+.+-..+.+-...-++||||++|.+|.++..-.. ..++...+...+.+++ +..+|..|++|+|
T Consensus 67 ~l~~l----~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 142 (278)
T 1byg_A 67 VMTQL----RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 142 (278)
T ss_dssp HHTTC----CCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHhC----CCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccC
Confidence 55444 233334444444333345689999999999988754221 1256666666665555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||++. .++++|||....
T Consensus 143 lkp~Nil~~~~~~~~l~Dfg~~~~ 166 (278)
T 1byg_A 143 LAARNVLVSEDNVAKVSDFGLTKE 166 (278)
T ss_dssp CSGGGEEECTTSCEEECCCCC---
T ss_pred CCcceEEEeCCCcEEEeecccccc
Confidence 999999964 589999997643
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.96 E-value=8.8e-10 Score=131.15 Aligned_cols=136 Identities=16% Similarity=0.107 Sum_probs=91.9
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+. .+|+.||||+........- . . .-.+.+|+
T Consensus 15 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~-------------------~---------~------~~~~~~E~ 60 (336)
T 3h4j_B 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKS-------------------D---------M------HMRVEREI 60 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHT-------------------T---------C------SHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHccch-------------------h---------H------HHHHHHHH
Confidence 6899999999999996 5899999999864321100 0 0 01234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.+++ +..-+.+-.++. ..+..+|||||++ ..+.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 61 ~~l~~l~----hpnIv~l~~~~~-~~~~~~lv~E~~~-g~l~~~l~-~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~D 133 (336)
T 3h4j_B 61 SYLKLLR----HPHIIKLYDVIT-TPTDIVMVIEYAG-GELFDYIV-EKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRD 133 (336)
T ss_dssp HHHTTCC----CTTBCCEEEEEE-CSSEEEEEECCCC-EEHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HHHHhCC----CCCCCeEEEEEE-eCCEEEEEEECCC-CcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 5554442 322233333332 3345689999995 45555432 345677777766666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 134 lkp~NIll~~~~~~kl~DFG~s~ 156 (336)
T 3h4j_B 134 LKPENLLLDDNLNVKIADFGLSN 156 (336)
T ss_dssp CSTTTEEECTTCCEEECCSSCTB
T ss_pred CchhhEEEcCCCCEEEEEeccce
Confidence 999999965 59999999764
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1.4e-09 Score=130.62 Aligned_cols=149 Identities=13% Similarity=0.093 Sum_probs=99.9
Q ss_pred ChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHH
Q psy12972 398 THSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVP 476 (1578)
Q Consensus 398 ~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 476 (1578)
.+.+-|.-. +.||.|++|.||+|+.+ +|+.||||+.+........ .....
T Consensus 9 ~~~~~y~~~--~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~-----------------~~~~~---------- 59 (361)
T 2yab_A 9 KVEDFYDIG--EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR-----------------RGVCR---------- 59 (361)
T ss_dssp CGGGTEEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCS-----------------SSBCH----------
T ss_pred ChhhceEEe--eEEeeCcCEEEEEEEECCCCCEEEEEEEEcccccccc-----------------chhHH----------
Confidence 344555444 67999999999999976 7999999998764321100 00000
Q ss_pred HHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HH
Q psy12972 477 LEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 477 l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~ 554 (1578)
-.+.+|++.+.++. +...+.+-.++. ....-+|||||++|.+|.++.. ....++...+...+.+++ +.
T Consensus 60 ----~~~~~E~~il~~l~----hpnIv~l~~~~~-~~~~~~lv~e~~~gg~L~~~l~-~~~~l~~~~~~~i~~qi~~aL~ 129 (361)
T 2yab_A 60 ----EEIEREVSILRQVL----HPNIITLHDVYE-NRTDVVLILELVSGGELFDFLA-QKESLSEEEATSFIKQILDGVN 129 (361)
T ss_dssp ----HHHHHHHHHHTTCC----CTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHT-TCSCCBHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHhCC----CcCCCcEEEEEE-eCCEEEEEEEcCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHH
Confidence 12345555554442 322233333332 2345689999999999988643 234567777776666665 78
Q ss_pred HHHHcCccccCCCCCCCCCC-------eeEEecCCchh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT-------WLYPVDLGDKF 585 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~-------~v~liDfG~~~ 585 (1578)
.+|..|++|+|++|.|||+. .++++|||...
T Consensus 130 ~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp HHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred HHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 89999999999999999852 48999999764
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.4e-09 Score=127.78 Aligned_cols=139 Identities=17% Similarity=0.144 Sum_probs=88.5
Q ss_pred cccccccceEEEEEEecC-C---CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTKE-G---VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~-G---~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+... + ..||||+.++.....- ..-.+.
T Consensus 29 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~ 73 (323)
T 3qup_A 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASS-----------------------------------DIEEFL 73 (323)
T ss_dssp EEEEEETTEEEEEEEC-------CEEEEEEC------CH-----------------------------------HHHHHH
T ss_pred ceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHH-----------------------------------HHHHHH
Confidence 689999999999999763 3 3899999865432110 011245
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCC-----ceEEEEeccCCCcCCchhhHhhc-----CCCHHHHHHHHHHHH--
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSS-----TRVLTTEFIDGVKISDKEGLLEK-----GFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t-----~~VLVME~i~G~~l~d~~~l~~~-----~~~~~~v~~~l~~~~-- 552 (1578)
+|++.+.++ .+...+.+-.++..-.. .-++||||++|.+|.++...... .++...+...+.+++
T Consensus 74 ~E~~~l~~l----~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~a 149 (323)
T 3qup_A 74 REAACMKEF----DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149 (323)
T ss_dssp HHHHHHTTC----CCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHC----CCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHH
Confidence 666666554 23222333333322111 12899999999999887542221 467777766666665
Q ss_pred HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+..+|..|++|+|++|.|||+. .++++|||....
T Consensus 150 l~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~ 186 (323)
T 3qup_A 150 MEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRK 186 (323)
T ss_dssp HHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC---
T ss_pred HHHHHcCCcccCCCCcceEEEcCCCCEEEeecccccc
Confidence 7889999999999999999965 599999998644
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=98.95 E-value=1.1e-09 Score=133.43 Aligned_cols=132 Identities=14% Similarity=0.065 Sum_probs=89.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+... .+.+|.
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~------------------------------------------~~~~E~ 105 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP------------------------------------------KARREV 105 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECSH------------------------------------------HHHHHH
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcch------------------------------------------hHHHHH
Confidence 57999999999999975 79999999985210 012233
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC---CCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK---SSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~---~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
..+.+. ..+...+.+-.++... ...-+|||||++|.+|.+...-. ...++...+...+.+++ +..+|..|+
T Consensus 106 ~~~~~~---~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i 182 (400)
T 1nxk_A 106 ELHWRA---SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 182 (400)
T ss_dssp HHHHHH---TTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHh---cCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 222222 1222223343444321 12347999999999998874321 12477777776666665 788999999
Q ss_pred cccCCCCCCCCCC------eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~------~v~liDfG~~~ 585 (1578)
+|+|+||+|||+. .++++|||...
T Consensus 183 vHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 183 AHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp ECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred cccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999999964 38999999764
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.3e-09 Score=127.11 Aligned_cols=136 Identities=18% Similarity=0.186 Sum_probs=93.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+........ ... -.+.+|+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------------------------~~~------~~~~~E~ 53 (311)
T 4agu_A 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDP-----------------------------VIK------KIALREI 53 (311)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-H-----------------------------HHH------HHHHHHH
T ss_pred eEEeecCCeEEEEEEeCCCCcEEEEEEeeccccch-----------------------------HHH------HHHHHHH
Confidence 67999999999999975 69999999875432110 000 1234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+-.++. .....+|||||++|..+.++.. ...+++...+...+.+++ +..+|..|++|+|
T Consensus 54 ~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~d 127 (311)
T 4agu_A 54 RMLKQLK----HPNLVNLLEVFR-RKRRLHLVFEYCDHTVLHELDR-YQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRD 127 (311)
T ss_dssp HHHHHCC----CTTBCCEEEEEE-ETTEEEEEEECCSEEHHHHHHH-TSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhCC----CCCccchhheee-cCCeEEEEEEeCCCchHHHHHh-hhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCC
Confidence 6665553 322233333332 2345689999999988877643 234577766666665555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 128 lkp~Nil~~~~~~~kl~Dfg~~~ 150 (311)
T 4agu_A 128 VKPENILITKHSVIKLCDFGFAR 150 (311)
T ss_dssp CSGGGEEECTTSCEEECCCTTCE
T ss_pred CChhhEEEcCCCCEEEeeCCCch
Confidence 999999964 58999999753
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1.8e-09 Score=130.99 Aligned_cols=136 Identities=16% Similarity=0.158 Sum_probs=93.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+|+.||||+........ ...-.+.+|++
T Consensus 62 ~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~~~Ei~ 106 (390)
T 2zmd_A 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADN-----------------------------------QTLDSYRNEIA 106 (390)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECTTCCH-----------------------------------HHHHHHHHHHH
T ss_pred EEEccCCCeEEEEEEcCCCCEEEEEEEecccccH-----------------------------------HHHHHHHHHHH
Confidence 6899999999999998889999999986532110 00113466777
Q ss_pred HHHHHHHhhCCCCCeeecEEe--eCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRIL--WDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~--~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
.+.++.. +++. |.+++ ......-+|||| +.|.+|.++.. ....++...+...+.+++ +..+|..|++|+
T Consensus 107 ~l~~l~~---~~~~--iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHr 179 (390)
T 2zmd_A 107 YLNKLQQ---HSDK--IIRLYDYEITDQYIYMVME-CGNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHS 179 (390)
T ss_dssp HHHHHTT---TCTT--BCCEEEEEECSSEEEEEEE-CCSEEHHHHHH-HCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCC
T ss_pred HHHHccc---CCCe--EEEEEEEEecCCEEEEEEe-cCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 7777653 1232 22333 223344689999 45778877643 234566666655555555 788999999999
Q ss_pred CCCCCCCCCC--eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT--WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~--~v~liDfG~~~~ 586 (1578)
|++|.|||+. .++++|||....
T Consensus 180 Dlkp~NIll~~~~~kl~DFG~a~~ 203 (390)
T 2zmd_A 180 DLKPANFLIVDGMLKLIDFGIANQ 203 (390)
T ss_dssp CCCGGGEEESSSCEEECCCSSSCC
T ss_pred CCCHHHEEEECCeEEEEecCcccc
Confidence 9999999964 599999997643
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=9.5e-10 Score=132.78 Aligned_cols=138 Identities=18% Similarity=0.118 Sum_probs=87.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+......-. . +..+..|.
T Consensus 44 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~-~---------------------------------~~~~~~e~ 89 (373)
T 2r5t_A 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKK-E---------------------------------EKHIMSER 89 (373)
T ss_dssp EEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC----------------------------------------------
T ss_pred EEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhH-H---------------------------------HHHHHHHH
Confidence 68999999999999976 6899999998754211000 0 00011111
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..+ ...+ +++. +.+-..+ .....-+|||||++|..|.+... ....++...+...+.+++ ++.+|..|++||
T Consensus 90 ~~l---l~~~-~hp~Iv~l~~~~-~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~givHr 163 (373)
T 2r5t_A 90 NVL---LKNV-KHPFLVGLHFSF-QTADKLYFVLDYINGGELFYHLQ-RERCFLEPRARFYAAEIASALGYLHSLNIVYR 163 (373)
T ss_dssp -CC---BCCC-CCTTBCCEEEEE-ECSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHH---HHhC-CCCCCCCEEEEE-EeCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence 110 0111 2232 2222222 22345689999999999987643 234566666555555554 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+||.|||+. .++++|||....
T Consensus 164 Dlkp~NIll~~~g~ikL~DFG~a~~ 188 (373)
T 2r5t_A 164 DLKPENILLDSQGHIVLTDFGLCKE 188 (373)
T ss_dssp CCCGGGEEECTTSCEEECCCCBCGG
T ss_pred CCCHHHEEECCCCCEEEeeCccccc
Confidence 9999999964 699999997643
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.9e-09 Score=126.64 Aligned_cols=136 Identities=18% Similarity=0.119 Sum_probs=94.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+....-.. +-++.+|.
T Consensus 30 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--------------------------------------~~~~~~e~ 71 (326)
T 2x7f_A 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE--------------------------------------EEEIKQEI 71 (326)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSST--------------------------------------THHHHHHH
T ss_pred EEeccCCCEEEEEEEECCCCCeEEEEEEecCccc--------------------------------------HHHHHHHH
Confidence 68999999999999964 8999999998643211 01234555
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCC-----CCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDK-----SSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~-----~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
+.+.++. +++. +.+-..+... ....+|||||++|.+|.++.... ...++...+...+.+++ +..+|.
T Consensus 72 ~~l~~l~----~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 147 (326)
T 2x7f_A 72 NMLKKYS----HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ 147 (326)
T ss_dssp HHHHHHC----CSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcc----CCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 5555552 2232 2222333221 34568999999999998875422 24577776666665555 788999
Q ss_pred cCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 559 TGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
.|++|+|++|.||++. .++++|||....
T Consensus 148 ~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 178 (326)
T 2x7f_A 148 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178 (326)
T ss_dssp TTCCCCCCSGGGEEECTTCCEEECCCTTTC-
T ss_pred CCccccCCcHHHEEEcCCCCEEEeeCcCcee
Confidence 9999999999999965 599999997644
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=98.95 E-value=1.3e-09 Score=127.73 Aligned_cols=138 Identities=17% Similarity=0.158 Sum_probs=94.4
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+..... ..+..
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~------------------------------------~~~~~ 74 (322)
T 1p4o_A 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM------------------------------------RERIE 74 (322)
T ss_dssp EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCH------------------------------------HHHHH
T ss_pred eEeccCCceEEEeeeecCccCCCCceEEEEEecccccCH------------------------------------HHHHH
Confidence 68999999999999864 4789999988643211 01123
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------cCCCHHHHHHHHHHHH-
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------KGFSLADVDRKLFTAF- 552 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------~~~~~~~v~~~l~~~~- 552 (1578)
|.+|++.+.++ .+...+.+-.++ ......+|||||++|.+|.++..-.. ..++...+...+.+++
T Consensus 75 ~~~E~~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 149 (322)
T 1p4o_A 75 FLNEASVMKEF----NCHHVVRLLGVV-SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149 (322)
T ss_dssp HHHHHHHGGGC----CCTTBCCEEEEE-CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhc----CCCCEeeeEEEE-ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHH
Confidence 45566555544 233223333333 22345689999999999988754211 2346666666665555
Q ss_pred -HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 553 -AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 553 -l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+..+|..|++|+|++|.||++. .++++|||....+
T Consensus 150 ~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~ 188 (322)
T 1p4o_A 150 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188 (322)
T ss_dssp HHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGG
T ss_pred HHHHHHHCCCccCCCccceEEEcCCCeEEECcCcccccc
Confidence 7889999999999999999964 5999999976443
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=98.95 E-value=1.9e-09 Score=129.31 Aligned_cols=134 Identities=17% Similarity=0.128 Sum_probs=94.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+.-.... .-.+.+|+
T Consensus 33 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~E~ 76 (364)
T 3qyz_A 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTY------------------------------------CQRTLREI 76 (364)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHH------------------------------------HHHHHHHH
T ss_pred EEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHH------------------------------------HHHHHHHH
Confidence 68999999999999965 799999999875322110 01234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC----CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS----STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~----t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+.+.++. +...+.+-.++.... ..-+|||||++| .|.++ +....++...+...+.+++ +..+|..|+
T Consensus 77 ~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~-~L~~~--l~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 149 (364)
T 3qyz_A 77 KILLRFR----HENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKL--LKTQHLSNDHICYFLYQILRGLKYIHSANV 149 (364)
T ss_dssp HHHHHCC----CTTBCCCCEEECCSSTTTCCCEEEEEECCSE-EHHHH--HHHCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHhcC----CCCCccceeEEecCCccccceEEEEEcccCc-CHHHH--HHhCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 6666653 333344444443221 346899999987 55554 3456688877777666666 788999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|+|+||+|||+. .++++|||...
T Consensus 150 vH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 150 LHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp ECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred ecCCCChHhEEECCCCCEEEEeCcceE
Confidence 9999999999965 59999999764
|
| >3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=2.3e-10 Score=114.20 Aligned_cols=87 Identities=13% Similarity=0.111 Sum_probs=69.3
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC----ceEEEEEECccc--hhhHhHcCccccCCcEEEEcCCcccccc
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL----GVGFFTVHVHNE--QGLARRLGVGSQLPQIALLTDGRTSFFK 945 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~----~v~~a~VDc~~~--~~L~~k~gV~~~~PTl~lf~~G~~~~y~ 945 (1578)
+.+.+||+|||+||++|+.+.+.. +..+... .+.+.+||.+.+ .+++.+++|.+ .|||++|++|+.+...
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i---~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g-~PT~i~f~~G~ev~Ri 92 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEI---APQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTF-TPTFVLMAGDVESGRL 92 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHT---TTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCS-SSEEEEEETTEEEEEE
T ss_pred cCCCEEEEEECCCCHHHHHHHHHH---HhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCC-CCEEEEEECCEEEeee
Confidence 357899999999999999986432 2222211 267888998876 58999999998 9999999999988888
Q ss_pred CCCCCHHHHHHHHHhhC
Q psy12972 946 EPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 946 ~G~~s~~~L~~fi~~~l 962 (1578)
.|...++.+..|+.+.+
T Consensus 93 ~G~~~~~~f~~~L~~~l 109 (116)
T 3dml_A 93 EGYPGEDFFWPMLARLI 109 (116)
T ss_dssp ECCCCHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHH
Confidence 89999999999997654
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=98.95 E-value=1.7e-09 Score=127.10 Aligned_cols=148 Identities=14% Similarity=0.125 Sum_probs=98.8
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.+-|.-. +.||.|++|.||+|+.+ +|+.||||+.+........ ....
T Consensus 10 ~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------~~~~------------ 58 (321)
T 2a2a_A 10 VEDFYDIG--EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR-----------------RGVS------------ 58 (321)
T ss_dssp HHHHEEEE--EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCS-----------------SSBC------------
T ss_pred hhccEEEe--eEeeecCCEEEEEEEECCCCeEEEEEEEecccccccc-----------------cchh------------
Confidence 34444443 68999999999999975 7999999998764321100 0000
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
.-.+.+|++.+.++. +...+.+-.++ ......+|||||++|.+|.++.. ....++...+...+.+++ +..
T Consensus 59 --~~~~~~E~~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~aL~~ 130 (321)
T 2a2a_A 59 --REEIEREVSILRQVL----HHNVITLHDVY-ENRTDVVLILELVSGGELFDFLA-QKESLSEEEATSFIKQILDGVNY 130 (321)
T ss_dssp --HHHHHHHHHHHHHCC----CTTBCCEEEEE-ECSSEEEEEECCCCSCBHHHHHH-TCSCEEHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHhCC----CCCcceEEEEE-ecCCEEEEEEEcCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHH
Confidence 012456666666553 32223332333 22345689999999999988743 223466666666666655 788
Q ss_pred HHHcCccccCCCCCCCCCC-------eeEEecCCchh
Q psy12972 556 IFQTGFVHADPHSGNDVNT-------WLYPVDLGDKF 585 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~-------~v~liDfG~~~ 585 (1578)
+|..|++|+|++|.||++. .++++|||...
T Consensus 131 lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp HHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred HHhCCeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 9999999999999999953 48999999764
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=98.94 E-value=1.5e-09 Score=132.94 Aligned_cols=141 Identities=14% Similarity=0.159 Sum_probs=96.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+..+..... .. .........+.+|+
T Consensus 141 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~-------------------~~----------~~~~~~~~~~~~E~ 191 (419)
T 3i6u_A 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAI-------------------GS----------AREADPALNVETEI 191 (419)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTT-------------------C------------------CCHHHHH
T ss_pred eEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcc-------------------cc----------cccchhHHHHHHHH
Confidence 67999999999999965 78999999987542110 00 00001112456777
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 192 ~~l~~l~----hpniv~l~~~~~--~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrD 264 (419)
T 3i6u_A 192 EILKKLN----HPCIIKIKNFFD--AEDYYIVLELMEGGELFDKVV-GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRD 264 (419)
T ss_dssp HHHHHCC----CTTBCCCCEEEE--SSEEEEEEECCTTCBGGGGTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHhCC----CCCEeeEEEEEe--cCceEEEEEcCCCCcHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 7777663 333344434432 234689999999999987642 234567776666666655 7889999999999
Q ss_pred CCCCCCCCC------eeEEecCCchh
Q psy12972 566 PHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~------~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 265 lkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 265 LKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp CCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred CChHhEEEecCCCcceEEEeecccce
Confidence 999999973 28999999764
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=1.9e-09 Score=127.76 Aligned_cols=146 Identities=10% Similarity=0.071 Sum_probs=94.9
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CC-CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EG-VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVP 476 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G-~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 476 (1578)
+.+-|.-. +.||.|++|.||+|+.. +| +.||||+.+..-..
T Consensus 17 ~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~----------------------------------- 59 (355)
T 2eu9_A 17 LQERYEIV--GNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKY----------------------------------- 59 (355)
T ss_dssp ETTTEEEE--EEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHH-----------------------------------
T ss_pred ecccEEEE--EEeeccCCeEEEEEEecCCCceEEEEEEEcccccc-----------------------------------
Confidence 34444444 67999999999999964 44 79999998642110
Q ss_pred HHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEe--eCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--
Q psy12972 477 LEQELDFLNEGRNAERCSKDLAHLPYVYIPRIL--WDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 477 l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~--~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~-- 552 (1578)
.-.+.+|++.+.++++.-.... ..+..++ .......+|||||+.|..+..+.......++...+...+.+++
T Consensus 60 ---~~~~~~E~~~l~~l~~~~~~~~-~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~ 135 (355)
T 2eu9_A 60 ---REAARLEINVLKKIKEKDKENK-FLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHA 135 (355)
T ss_dssp ---HHHHHHHHHHHHHHHHHCTTSC-SCBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred ---hhHHHHHHHHHHHHhhcCCCCc-eeEEEeeeeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence 0123556666766665322111 1122222 1234566899999966544433222223577777777666666
Q ss_pred HHHHHHcCccccCCCCCCCCC----------------------CeeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVN----------------------TWLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv----------------------~~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.|||+ +.++++|||...
T Consensus 136 L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~ 190 (355)
T 2eu9_A 136 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 190 (355)
T ss_dssp HHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCE
T ss_pred HHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccc
Confidence 888999999999999999997 248889999753
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=98.94 E-value=1.2e-09 Score=136.79 Aligned_cols=134 Identities=19% Similarity=0.140 Sum_probs=96.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+.+... .-+|.+|+
T Consensus 226 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~--------------------------------------~~~~~~E~ 267 (495)
T 1opk_A 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--------------------------------------VEEFLKEA 267 (495)
T ss_dssp EESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSC--------------------------------------HHHHHHHH
T ss_pred eEecCCCCeEEEEEEEcCCCeEEEEEEecCcccc--------------------------------------hHHHHHHH
Confidence 57999999999999977 5899999998653210 01246677
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +...|.+-.++. .....+|||||++|.+|.++..-. ...++...+...+.+++ +..+|..|++|+
T Consensus 268 ~~l~~l~----hpniv~l~~~~~-~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHr 342 (495)
T 1opk_A 268 AVMKEIK----HPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 342 (495)
T ss_dssp HHHHHCC----CTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred HHHHhcC----CCCEeeEEEEEe-cCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 7776653 333333333332 234568999999999998874321 23466666666666655 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.|||++ .++++|||...
T Consensus 343 Dlkp~NIll~~~~~~kl~DFG~a~ 366 (495)
T 1opk_A 343 NLAARNCLVGENHLVKVADFGLSR 366 (495)
T ss_dssp CCSGGGEEECGGGCEEECCTTCEE
T ss_pred CCChhhEEECCCCcEEEeecccce
Confidence 9999999975 59999999764
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=98.94 E-value=6.3e-10 Score=134.32 Aligned_cols=138 Identities=14% Similarity=0.101 Sum_probs=91.0
Q ss_pred cccccccceEEEEEEec--CC--CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK--EG--VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--~G--~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+.. +| ..||||+.+...... ..-+|.
T Consensus 95 ~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~ 138 (373)
T 3c1x_A 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG------------------------------------EVSQFL 138 (373)
T ss_dssp EEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSH------------------------------------HHHHHH
T ss_pred cEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHH------------------------------------HHHHHH
Confidence 57999999999999964 33 468999875421110 011245
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++ .+...+.+-.+..+-....+|||||++|.+|.++..-....++...+...+.+++ +..+|..|++
T Consensus 139 ~E~~il~~l----~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 214 (373)
T 3c1x_A 139 TEGIIMKDF----SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 214 (373)
T ss_dssp HHHTTSTTC----CCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhC----CCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 555555443 2333344434433334456899999999999887543334566666666665655 8899999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+|++|.|||+. .++++|||....
T Consensus 215 HrDlkp~NIll~~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 215 HRDLAARNCMLDEKFTVKVADFGLARD 241 (373)
T ss_dssp CSCCCGGGEEECTTCCEEECCC-----
T ss_pred cCccchheEEECCCCCEEEeecccccc
Confidence 999999999975 599999997643
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=1.4e-09 Score=128.18 Aligned_cols=138 Identities=19% Similarity=0.177 Sum_probs=93.1
Q ss_pred cccccccceEEEEEEe------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVT------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+. .+|+.||||+.+..... ..+.+
T Consensus 36 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~------------------------------------~~~~~ 79 (327)
T 2yfx_A 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE------------------------------------QDELD 79 (327)
T ss_dssp EECC--CSSCEEEEEC--------CCEEEEEECCSSCCH------------------------------------HHHHH
T ss_pred EEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccch------------------------------------hhHHH
Confidence 6799999999999984 36889999998643211 01224
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh------cCCCHHHHHHHHHHHH--HH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE------KGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~------~~~~~~~v~~~l~~~~--l~ 554 (1578)
+.+|++.+.++. +...+.+-.++. .....+|||||++|.+|.++..-.. ..++...+...+.+++ +.
T Consensus 80 ~~~E~~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~ 154 (327)
T 2yfx_A 80 FLMEALIISKFN----HQNIVRCIGVSL-QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154 (327)
T ss_dssp HHHHHHHHHHCC----CTTBCCEEEEEC-SSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCC----CCCCCeEEEEEc-CCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHH
Confidence 566777666652 322233333332 2345689999999999988754221 2366666666666655 78
Q ss_pred HHHHcCccccCCCCCCCCCC------eeEEecCCchhhh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT------WLYPVDLGDKFRL 587 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~------~v~liDfG~~~~l 587 (1578)
.+|..|++|+|++|.|||+. .++++|||....+
T Consensus 155 ~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~ 193 (327)
T 2yfx_A 155 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 193 (327)
T ss_dssp HHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred HHhhCCeecCcCCHhHEEEecCCCcceEEECcccccccc
Confidence 89999999999999999975 3899999976443
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=98.94 E-value=1.4e-09 Score=124.81 Aligned_cols=132 Identities=14% Similarity=0.057 Sum_probs=93.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+..-. .+.+|+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----------------------------------------~~~~e~ 55 (284)
T 2a19_B 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE-----------------------------------------KAEREV 55 (284)
T ss_dssp EEEECSSSCCEEEEEETTTCCEEEEEEEECCSG-----------------------------------------GGHHHH
T ss_pred eeeccCCceEEEEEEEcCCCeEEEEEEeccccH-----------------------------------------HHHHHH
Confidence 67999999999999976 899999999865321 123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC---------------CCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK---------------SSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTA 551 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~---------------~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~ 551 (1578)
+.+.++ .+...+.+..++... ...-+|||||++|.+|.++..-. ...++...+...+.++
T Consensus 56 ~~l~~l----~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi 131 (284)
T 2a19_B 56 KALAKL----DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQI 131 (284)
T ss_dssp HHHHHC----CCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHH
T ss_pred HHHHhC----CCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHH
Confidence 555444 233333333333210 12247999999999999875422 2457776666666555
Q ss_pred H--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 552 F--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 552 ~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+ +..+|..|++|+|++|.||++. .++++|||...
T Consensus 132 ~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 170 (284)
T 2a19_B 132 TKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVT 170 (284)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred HHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhhe
Confidence 5 7889999999999999999964 59999999753
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=1.6e-09 Score=128.50 Aligned_cols=132 Identities=14% Similarity=0.114 Sum_probs=90.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+..... ..|.
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------------------------------------------~~e~ 72 (336)
T 3fhr_A 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA------------------------------------------RQEV 72 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESSHHH------------------------------------------HHHH
T ss_pred eeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHH------------------------------------------HHHH
Confidence 57999999999999976 7999999998643210 0111
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC---ceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS---TRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t---~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
... .....+...+.+-.++..... .-+|||||++|.+|.++..-.. ..++...+...+.+++ +..+|..|+
T Consensus 73 ~~~---~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~i 149 (336)
T 3fhr_A 73 DHH---WQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNI 149 (336)
T ss_dssp HHH---HHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHH---HHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 111 111223333444444433222 2479999999999988743221 2477777777666665 888999999
Q ss_pred cccCCCCCCCCCC------eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~------~v~liDfG~~~ 585 (1578)
+|+|++|.||++. .++++|||...
T Consensus 150 vH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 150 AHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp ECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred ecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 9999999999974 28999999763
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=1.6e-09 Score=126.40 Aligned_cols=136 Identities=14% Similarity=0.112 Sum_probs=93.5
Q ss_pred cccccccceEEEEEEe------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVT------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+. .+|+.||||+.+...... + .-+
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~---------------------------------~~~ 72 (314)
T 2ivs_A 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS---E---------------------------------LRD 72 (314)
T ss_dssp EEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHH---H---------------------------------HHH
T ss_pred eeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHH---H---------------------------------HHH
Confidence 6799999999999985 256899999987543211 0 012
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-----------------------cCC
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-----------------------KGF 539 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-----------------------~~~ 539 (1578)
+.+|++.+.++ .+..-+.+-..+ .....-+|||||++|.+|.++..-.. ..+
T Consensus 73 ~~~E~~~l~~l----~hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (314)
T 2ivs_A 73 LLSEFNVLKQV----NHPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147 (314)
T ss_dssp HHHHHHHHTTC----CCTTBCCEEEEE-CSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEE
T ss_pred HHHHHHHHhhC----CCCceeeEEEEE-ecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCc
Confidence 35566655544 222223332332 23445689999999999988754211 125
Q ss_pred CHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 540 SLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 540 ~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+...+...+.+++ +..+|..|++|+|++|.||++. .++++|||...
T Consensus 148 ~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~ 198 (314)
T 2ivs_A 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198 (314)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccccc
Confidence 6666666666655 7889999999999999999964 69999999764
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.94 E-value=1.5e-09 Score=135.30 Aligned_cols=137 Identities=15% Similarity=0.112 Sum_probs=95.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+..+..... .+ ..-.+.+|+
T Consensus 22 ~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~--~~--------------------------------~~~~~~~Ei 67 (476)
T 2y94_A 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRS--LD--------------------------------VVGKIRREI 67 (476)
T ss_dssp EEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHH--TT--------------------------------THHHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC--HH--------------------------------HHHHHHHHH
Confidence 68999999999999975 89999999987532110 00 001235566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+-.++. ..+..+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 68 ~~l~~l----~HpnIv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~-~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrD 141 (476)
T 2y94_A 68 QNLKLF----RHPHIIKLYQVIS-TPSDIFMVMEYVSGGELFDYIC-KNGRLDEKESRRLFQQILSGVDYCHRHMVVHRD 141 (476)
T ss_dssp HHHTTC----CCTTBCCEEEEEE-CSSEEEEEEECCSSEEHHHHTT-SSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSC
T ss_pred HHHHhC----CCCCCCcEEEEEE-ECCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCCccc
Confidence 655443 2333233333332 2355689999999999988643 234577777666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 142 Lkp~NIll~~~~~vkL~DFG~a~ 164 (476)
T 2y94_A 142 LKPENVLLDAHMNAKIADFGLSN 164 (476)
T ss_dssp CSGGGEEECTTCCEEECCCSSCE
T ss_pred ccHHHEEEecCCCeEEEeccchh
Confidence 999999964 59999999764
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=1.3e-09 Score=128.65 Aligned_cols=137 Identities=19% Similarity=0.192 Sum_probs=94.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+......... . +-.+.+|+
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------~------~~~~~~E~ 75 (331)
T 4aaa_A 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKM-----------------------------V------KKIAMREI 75 (331)
T ss_dssp EEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHH-----------------------------H------HHHHHHHH
T ss_pred eEEeecCCEEEEEEEECCCCceEEEEEEecCCCchH-----------------------------H------HHHHHHHH
Confidence 68999999999999976 699999998754321110 0 01234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-.++. .....+|||||++|..+.++.. ...+++...+...+.+++ +..+|..|++|+|
T Consensus 76 ~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~d 149 (331)
T 4aaa_A 76 KLLKQLR----HENLVNLLEVCK-KKKRWYLVFEFVDHTILDDLEL-FPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRD 149 (331)
T ss_dssp HHHHHCC----CTTBCCEEEEEE-ETTEEEEEEECCSEEHHHHHHH-STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHhhCC----CCCEeeEEEEee-cCCEEEEEEecCCcchHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHHCCEEccC
Confidence 6665553 222233333332 2345689999999988887632 345677777777666666 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 150 lkp~Nil~~~~~~~kl~Dfg~~~~ 173 (331)
T 4aaa_A 150 IKPENILVSQSGVVKLCDFGFART 173 (331)
T ss_dssp CCGGGEEECTTSCEEECCCTTC--
T ss_pred cChheEEEcCCCcEEEEeCCCcee
Confidence 999999964 599999997643
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=98.93 E-value=1.5e-09 Score=127.98 Aligned_cols=132 Identities=15% Similarity=0.137 Sum_probs=90.2
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+.. |+.||||+....-... +..|..
T Consensus 43 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~----------------------------------------~~~e~~ 81 (337)
T 3mdy_A 43 KQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEAS----------------------------------------WFRETE 81 (337)
T ss_dssp EEEEEETTEEEEEEEET-TEEEEEEEEEGGGHHH----------------------------------------HHHHHH
T ss_pred eEeecCCCeEEEEEEEC-CceEEEEEEeccccch----------------------------------------hhhHHH
Confidence 68999999999999875 9999999986432211 011111
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCC---CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHc----
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKS---STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQT---- 559 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~---t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~---- 559 (1578)
..... .+.+...+.+-..+.+.. ...+|||||++|.+|.++. ...+++...+...+.+++ +..+|..
T Consensus 82 ~~~~~--~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ 157 (337)
T 3mdy_A 82 IYQTV--LMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL--KSTTLDAKSMLKLAYSSVSGLCHLHTEIFST 157 (337)
T ss_dssp HHTST--TCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHH--HHCCBCHHHHHHHHHHHHHHHHHHHSCBCST
T ss_pred HHHHH--hhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 11111 012222233333333222 3457999999999998874 556788877777776666 7788887
Q ss_pred ----CccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 560 ----GFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 560 ----G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|+|++|.|||+. .++++|||...
T Consensus 158 ~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~ 190 (337)
T 3mdy_A 158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 190 (337)
T ss_dssp TCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred ccCCCEEecccchHHEEECCCCCEEEEeCCCce
Confidence 999999999999964 58999999763
|
| >3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.93 E-value=3.5e-10 Score=120.93 Aligned_cols=104 Identities=16% Similarity=0.248 Sum_probs=81.3
Q ss_pred eeccccccceeccc-CCCCcEEEEEEcCCCcccccccHHH---HHHHHHhCCCceEEEEEECccchhh------------
Q psy12972 857 STTHWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVHNEQGL------------ 920 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~---~~lA~~l~~~~v~~a~VDc~~~~~L------------ 920 (1578)
..+..+|++.+... ..+++++|.|||+||++|+.+.+.. .++.+.+++ ++.++.||++.+.++
T Consensus 30 ~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~ 108 (172)
T 3f9u_A 30 HAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNKTPLTEPVKIMENGTE 108 (172)
T ss_dssp CCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCCCEEEEEEEEEETTEE
T ss_pred ccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcccccchhhhhhhcchh
Confidence 35566776655322 3478999999999999999984444 555555543 489999999887655
Q ss_pred --------------HhHcCccccCCcEEEE-cCCccccccCCCCC-HHHHHHHHHhhC
Q psy12972 921 --------------ARRLGVGSQLPQIALL-TDGRTSFFKEPSFS-VQKMVEFFRLKL 962 (1578)
Q Consensus 921 --------------~~k~gV~~~~PTl~lf-~~G~~~~y~~G~~s-~~~L~~fi~~~l 962 (1578)
+++|+|.+ +||++++ ++|+.+....|..+ .+++.+++.+.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~-~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 109 RTLRTVGDKWSYLQRVKFGANA-QPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp EEEEEHHHHHHHHHHHHHSCCC-SSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhHHHHHHcCCCC-cceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHH
Confidence 89999998 9999999 88988877779888 999999998754
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=1.9e-09 Score=136.76 Aligned_cols=138 Identities=16% Similarity=0.083 Sum_probs=95.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+........ -..+-.+.+|.
T Consensus 190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~----------------------------------~~~~~~~~~E~ 235 (576)
T 2acx_A 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK----------------------------------RKGEAMALNEK 235 (576)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH----------------------------------TTCHHHHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhh----------------------------------hHHHHHHHHHH
Confidence 68999999999999975 79999999986431100 00112245566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +...|.+-..+. ....-+|||||++|.+|.+..... ..+++...+...+.+++ ++.+|..|++|+
T Consensus 236 ~iL~~l~----hp~Iv~l~~~~~-~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHr 310 (576)
T 2acx_A 236 QILEKVN----SRFVVSLAYAYE-TKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYR 310 (576)
T ss_dssp HHHHHCC----CTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHcC----CCCEeeEEEEEe-eCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEecc
Confidence 6665542 222233323332 234568999999999998764321 22377777666666655 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+||.|||+. .++++|||...
T Consensus 311 DLKPeNILld~~g~vKL~DFGla~ 334 (576)
T 2acx_A 311 DLKPENILLDDHGHIRISDLGLAV 334 (576)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCE
T ss_pred CCchheEEEeCCCCeEEEecccce
Confidence 9999999964 59999999764
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.93 E-value=1.4e-09 Score=131.73 Aligned_cols=137 Identities=11% Similarity=0.020 Sum_probs=93.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+........ . -. .-.+.+|+
T Consensus 21 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~--~------------------~~--------------~~~~~~E~ 66 (384)
T 4fr4_A 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVE--R------------------NE--------------VRNVFKEL 66 (384)
T ss_dssp EEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHH--T------------------TC--------------HHHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehhhccc--H------------------HH--------------HHHHHHHH
Confidence 68999999999999965 68999999986432100 0 00 01234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...|.+-..+. -....+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 67 ~il~~l----~hp~Iv~l~~~~~-~~~~~~lv~e~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrD 140 (384)
T 4fr4_A 67 QIMQGL----EHPFLVNLWYSFQ-DEEDMFMVVDLLLGGDLRYHLQ-QNVHFKEETVKLFICELVMALDYLQNQRIIHRD 140 (384)
T ss_dssp HHHHTC----CCTTBCCEEEEEE-CSSEEEEEECCCTTEEHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhC----CCCCCCcEEEEEE-eCCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence 555544 2222222222222 2345689999999999987643 233567666666665655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 141 lkp~NIll~~~g~vkL~DFG~a~ 163 (384)
T 4fr4_A 141 MKPDNILLDEHGHVHITDFNIAA 163 (384)
T ss_dssp CSGGGEEECTTSCEEECCCTTCE
T ss_pred CcHHHeEECCCCCEEEeccceee
Confidence 999999964 59999999764
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=2e-09 Score=127.29 Aligned_cols=132 Identities=16% Similarity=0.136 Sum_probs=92.5
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+. +|+.||||+..+.-.. ++..|++
T Consensus 48 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~----------------------------------------~~~~e~~ 86 (342)
T 1b6c_B 48 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER----------------------------------------SWFREAE 86 (342)
T ss_dssp EEEEEETTEEEEEEEE-TTEEEEEEEECGGGHH----------------------------------------HHHHHHH
T ss_pred eeecCCCCcEEEEEEE-cCccEEEEEeCchhHH----------------------------------------HHHHHHH
Confidence 6899999999999987 6999999998643211 1223333
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCC---CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHH------
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKS---STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIF------ 557 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~---t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~------ 557 (1578)
.+.+.. +.+..-+.+-..+..-. ...+|||||++|.+|.++. ...+++...+...+.++. +..+|
T Consensus 87 ~~~~~~--l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ 162 (342)
T 1b6c_B 87 IYQTVM--LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 162 (342)
T ss_dssp HHHHSC--CCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHH--HHCCBCHHHHHHHHHHHHHHHHHHHCCBCST
T ss_pred HHHHhh--cCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHH--hccCccHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 333211 22322233333333222 2568999999999998874 456778777777666665 77888
Q ss_pred --HcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 558 --QTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 558 --~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
..|++|+|++|.|||+. .++++|||...
T Consensus 163 ~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~ 195 (342)
T 1b6c_B 163 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 195 (342)
T ss_dssp TCBCEEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred cccCCeeeCCCCHHHEEECCCCCEEEEECCCce
Confidence 88999999999999964 58999999763
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=2.1e-09 Score=127.67 Aligned_cols=135 Identities=16% Similarity=0.102 Sum_probs=93.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+.-... ...++.+|+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~~E~ 60 (353)
T 2b9h_A 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL------------------------------------FALRTLREI 60 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHH------------------------------------HHHHHHHHH
T ss_pred eEEcCCCCeEEEEEEECCCCcEEEEEeecccccch------------------------------------HHHHHHHHH
Confidence 67999999999999975 79999999986532111 011234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC----CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK----SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~----~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+.+.+++ +...+.+-.+...- ....+|||||++| .|.+. +....++...+...+.+++ +..+|..|+
T Consensus 61 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~--~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 133 (353)
T 2b9h_A 61 KILKHFK----HENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRV--ISTQMLSDDHIQYFIYQTLRAVKVLHGSNV 133 (353)
T ss_dssp HHHHHCC----CTTBCCEEEECCCSCSTTCCCEEEEECCCSE-EHHHH--HHHCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHhCc----CCCcCCeeeeecccccCccceEEEEEeccCc-cHHHH--HhhcCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 6665553 32223332222211 2456899999986 55554 3445678777777666665 788999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|++|.|||+. .++++|||....
T Consensus 134 vH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (353)
T 2b9h_A 134 IHRDLKPSNLLINSNCDLKVCDFGLARI 161 (353)
T ss_dssp ECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred ecCCCCHHHeEEcCCCcEEEEecccccc
Confidence 9999999999964 599999997643
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=98.93 E-value=2.9e-09 Score=122.28 Aligned_cols=140 Identities=15% Similarity=0.113 Sum_probs=97.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+........ .... .-.+.+|+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-----------------~~~~--------------~~~~~~E~ 59 (283)
T 3bhy_A 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSR-----------------RGVS--------------REEIEREV 59 (283)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCS-----------------SSBC--------------HHHHHHHH
T ss_pred HhhcccCceEEEEEEEcCCCCeeehHHhhhccccccc-----------------cchH--------------HHHHHHHH
Confidence 67999999999999976 7999999998654321100 0000 11245666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+-.++. .....+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 60 ~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 133 (283)
T 3bhy_A 60 NILREIR----HPNIITLHDIFE-NKTDVVLILELVSGGELFDFLA-EKESLTEDEATQFLKQILDGVHYLHSKRIAHFD 133 (283)
T ss_dssp HHHHHCC----CTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHhCC----CCCeeehhheec-CCCeEEEEEeecCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence 6666653 322233333332 2455689999999999988753 334677777777666665 7889999999999
Q ss_pred CCCCCCCCC-------eeEEecCCchh
Q psy12972 566 PHSGNDVNT-------WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~-------~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 134 l~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 134 LKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp CSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred CChHHEEEecCCCCCCceEEEecccce
Confidence 999999963 58999999764
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=2e-09 Score=134.42 Aligned_cols=142 Identities=21% Similarity=0.189 Sum_probs=99.1
Q ss_pred hhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHH
Q psy12972 401 QLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQ 479 (1578)
Q Consensus 401 ~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 479 (1578)
+-|.-. +.||.|++|.||+|+.+ +|+.||||+........ .+
T Consensus 22 ~~y~~~--~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---------------------~~-------------- 64 (486)
T 3mwu_A 22 ERYNIV--CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN---------------------KD-------------- 64 (486)
T ss_dssp HHEEEE--EEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC---------------------SC--------------
T ss_pred cceEEe--EEEeecCCEEEEEEEECCCCCEEEEEEEecccccc---------------------hH--------------
Confidence 334443 68999999999999975 89999999986432110 00
Q ss_pred HHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHH
Q psy12972 480 ELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIF 557 (1578)
Q Consensus 480 ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~ 557 (1578)
.-.+.+|++.+.++. +...+.+-.++. ....-+|||||++|.+|.+... ....++...+...+.+++ +..+|
T Consensus 65 ~~~~~~E~~~l~~l~----hpniv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH 138 (486)
T 3mwu_A 65 TSTILREVELLKKLD----HPNIMKLFEILE-DSSSFYIVGELYTGGELFDEII-KRKRFSEHDAARIIKQVFSGITYMH 138 (486)
T ss_dssp HHHHHHHHHHHHHCC----CTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC----CCCcCeEEEEEE-cCCEEEEEEEcCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 012355666666652 333333333432 2345689999999999977643 345677777777666665 78899
Q ss_pred HcCccccCCCCCCCCCC------eeEEecCCchh
Q psy12972 558 QTGFVHADPHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 558 ~~G~vH~DpHPGNilv~------~v~liDfG~~~ 585 (1578)
..|++|+|+||.|||+. .++++|||...
T Consensus 139 ~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred HCCeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 99999999999999973 48999999764
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=98.92 E-value=2.4e-09 Score=139.05 Aligned_cols=138 Identities=14% Similarity=0.057 Sum_probs=91.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+...... .+ .. -.+..|.
T Consensus 347 ~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~--~~------------------~~--------------~~~~~E~ 392 (674)
T 3pfq_A 347 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ--DD------------------DV--------------ECTMVEK 392 (674)
T ss_dssp EESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHH--TT------------------TT--------------HHHHHHH
T ss_pred EEEccCCCEEEEEEEECCCCcEEEEEEEecccccc--HH------------------HH--------------HHHHHHH
Confidence 57999999999999965 78999999987532110 00 00 0112233
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.. ..+++.|.--.-+..-...-+|||||++|..|.+... ....++...+...+.+++ ++.+|..|++|||
T Consensus 393 ~~l~~----~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrD 467 (674)
T 3pfq_A 393 RVLAL----PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-QVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 467 (674)
T ss_dssp HHHTC----TTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCC
T ss_pred HHHHh----ccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecc
Confidence 33322 2233433222222222344579999999999987643 234577776666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 468 LKp~NILl~~~g~ikL~DFGla~ 490 (674)
T 3pfq_A 468 LKLDNVMLDSEGHIKIADFGMCK 490 (674)
T ss_dssp CCSTTEEECSSSCEEECCCTTCE
T ss_pred CChhhEEEcCCCcEEEeecceee
Confidence 999999964 59999999764
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=98.92 E-value=2.5e-09 Score=123.62 Aligned_cols=135 Identities=16% Similarity=0.058 Sum_probs=90.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+..-.. . -.+.+|+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~---------------------------------~~~~~E~ 53 (303)
T 1zy4_A 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-----L---------------------------------STILSEV 53 (303)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHH-----H---------------------------------HHHHHHH
T ss_pred heeccCCcEEEEEEEEcCCCeEEEEEEEeccHHH-----H---------------------------------HHHHHHH
Confidence 67999999999999964 8999999998542110 0 1134455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC------------CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--H
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD------------KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--A 553 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~------------~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l 553 (1578)
+.+.++ .+...+.+-..+.+ .....+|||||++|.+|.++..-.....+...+...+.+++ +
T Consensus 54 ~~l~~l----~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l 129 (303)
T 1zy4_A 54 MLLASL----NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129 (303)
T ss_dssp HHHTTC----CCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHH
T ss_pred HHHHhc----CchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHH
Confidence 554443 22222222222111 12345799999999999887543333455566655555555 7
Q ss_pred HHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 554 EQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 554 ~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
..+|..|++|+|++|.|||+. .++++|||...
T Consensus 130 ~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 164 (303)
T 1zy4_A 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164 (303)
T ss_dssp HHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCS
T ss_pred HHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchh
Confidence 889999999999999999964 58999999754
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=98.92 E-value=2.8e-09 Score=128.96 Aligned_cols=136 Identities=14% Similarity=0.194 Sum_probs=83.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+........ .+ .-.+.+|.
T Consensus 15 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~--~~---------------------------------~~~~~~E~ 59 (388)
T 3oz6_A 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNS--TD---------------------------------AQRTFREI 59 (388)
T ss_dssp EC-------CEEEEEETTTCCEEEEEEECC--CCH--HH---------------------------------HHHHHHHH
T ss_pred EEeeeCCCeEEEEEEECCCCCEEEEEEecccccCh--HH---------------------------------HHHHHHHH
Confidence 68999999999999964 89999999875432111 00 01123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..+.++. .+...+.+-.++..-. ..-+|||||++| .+.++ +....++...+...+.+++ ++.+|..|++||
T Consensus 60 ~~l~~l~---~h~niv~l~~~~~~~~~~~~~lv~e~~~~-~L~~~--~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHr 133 (388)
T 3oz6_A 60 MILTELS---GHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAV--IRANILEPVHKQYVVYQLIKVIKYLHSGGLLHR 133 (388)
T ss_dssp HHHHHTT---TCTTBCCEEEEEECTTSSCEEEEEECCSE-EHHHH--HHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHhcc---CCCCCCeeeeEEecCCCCEEEEEecccCc-CHHHH--HHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeC
Confidence 5554443 1222334444443222 235899999986 55544 3445677666665555555 789999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+||+|||+. .++++|||...
T Consensus 134 Dlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 134 DMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCE
T ss_pred CCCHHHeEEcCCCCEEecCCcccc
Confidence 9999999965 59999999764
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.92 E-value=1.8e-09 Score=127.37 Aligned_cols=132 Identities=17% Similarity=0.083 Sum_probs=86.3
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+. +|+.||||+..+.-.... ..|..
T Consensus 19 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~----------------------------------------~~e~~ 57 (336)
T 3g2f_A 19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNF----------------------------------------INEKN 57 (336)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHHH----------------------------------------HHHHH
T ss_pred eecccCCCeEEEEEEE-CCeEEEEEEeeccchhhH----------------------------------------HHHHH
Confidence 6899999999999976 799999999865432110 11110
Q ss_pred HHHHHHHhhCCCCCeeecEEee--CCCC--ceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHc---
Q psy12972 489 NAERCSKDLAHLPYVYIPRILW--DKSS--TRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQT--- 559 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~--~~~t--~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~--- 559 (1578)
- .+. ..+.+...+.+-..+. ...+ .-+|||||++|.+|.++. ...+.+...+...+.+++ +..+|..
T Consensus 58 ~-~~~-~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~ 133 (336)
T 3g2f_A 58 I-YRV-PLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL--SLHTSDWVSSCRLAHSVTRGLAYLHTELPR 133 (336)
T ss_dssp H-HTS-TTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHH--HHCCBCHHHHHHHHHHHHHHHHHHHCCBCC
T ss_pred H-HHH-HhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHH--hhcccchhHHHHHHHHHHHHHHHHHhhhcc
Confidence 0 000 1122222222221111 1111 237999999999998874 455566666666555555 7788988
Q ss_pred ------CccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 560 ------GFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 560 ------G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|+|++|.|||+. .++++|||...
T Consensus 134 ~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~ 168 (336)
T 3g2f_A 134 GDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSM 168 (336)
T ss_dssp GGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCE
T ss_pred ccccccceeecccccceEEEcCCCcEEEeecccee
Confidence 999999999999965 59999999764
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=98.92 E-value=2.4e-09 Score=129.55 Aligned_cols=136 Identities=17% Similarity=0.113 Sum_probs=96.0
Q ss_pred cccccc--cceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 409 NPIAAA--SLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 409 ~Plasa--SiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
+.||.| ++|.||+|+.+ +|+.||||+.+...... +.. -.+.+
T Consensus 31 ~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------------------------~~~------~~~~~ 75 (389)
T 3gni_B 31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN-----------------------------EMV------TFLQG 75 (389)
T ss_dssp EEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCH-----------------------------HHH------HHHHH
T ss_pred ecccCCcCCceEEEEEEEcCCCCEEEEEEecccccCh-----------------------------HHH------HHHHH
Confidence 689999 99999999976 79999999987543211 000 12345
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
|++.+.++. +...|.+-.++. ....-+|||||++|.+|.++.... ..+++...+...+.+++ +..+|..|++
T Consensus 76 E~~~l~~l~----h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv 150 (389)
T 3gni_B 76 ELHVSKLFN----HPNIVPYRATFI-ADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYV 150 (389)
T ss_dssp HHHHHHHCC----CTTBCCEEEEEE-ETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHhCC----CCCCCcEeEEEE-ECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 666665553 333333333332 234568999999999998875422 24577777766666665 8889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCch
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~ 584 (1578)
|+|+||.|||+. .++++|||..
T Consensus 151 HrDlkp~NIll~~~~~~kl~dfg~~ 175 (389)
T 3gni_B 151 HRSVKASHILISVDGKVYLSGLRSN 175 (389)
T ss_dssp CCCCSGGGEEECTTCCEEECCGGGC
T ss_pred cCCCCHHHEEEcCCCCEEEcccccc
Confidence 999999999965 5999999865
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=9.9e-10 Score=135.63 Aligned_cols=137 Identities=15% Similarity=0.064 Sum_probs=89.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.++.....- + ....+.+|+
T Consensus 154 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--~--------------------------------~~~~~~~e~ 199 (446)
T 4ejn_A 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK--D--------------------------------EVAHTLTEN 199 (446)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC----------------------------------------------
T ss_pred EEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhh--H--------------------------------HHHHHHHHH
Confidence 68999999999999964 799999999875421100 0 000122333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~vH~ 564 (1578)
+.+.++ .+...+.+-..+. .....+|||||++|.+|.+... ....++...+...+.+++ +..+|. .|++|+
T Consensus 200 ~~l~~l----~h~~iv~l~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHr 273 (446)
T 4ejn_A 200 RVLQNS----RHPFLTALKYSFQ-THDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 273 (446)
T ss_dssp -CCCCC----SCTTSCCEEEEEE-ETTEEEEEECCCSSCBHHHHHH-HHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HHHHhC----CCCeEeeEEEEEe-eCCEEEEEEeeCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEEC
Confidence 333222 2222233323332 2345679999999999977643 334567776666666655 788997 999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+||.|||+. .++++|||...
T Consensus 274 Dlkp~NIll~~~~~~kl~DFG~a~ 297 (446)
T 4ejn_A 274 DLKLENLMLDKDGHIKITDFGLCK 297 (446)
T ss_dssp CCCGGGEEECSSSCEEECCCCCCC
T ss_pred CCCHHHEEECCCCCEEEccCCCce
Confidence 9999999964 59999999764
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=98.92 E-value=2.2e-09 Score=124.23 Aligned_cols=138 Identities=14% Similarity=0.072 Sum_probs=94.7
Q ss_pred cccccccceEEEEEEec-C---CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK-E---GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~---G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+.. + +..||||+........ ..-.|.
T Consensus 27 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~~~ 70 (298)
T 3pls_A 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQ------------------------------------QVEAFL 70 (298)
T ss_dssp EEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHH------------------------------------HHHHHH
T ss_pred ceeccCCCceEEEEEEecCCCceeeeeeeeccccccHH------------------------------------HHHHHH
Confidence 67999999999999854 3 3379999875422110 001245
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++ .+..-+.+-.++.+-....+++|||+.|.+|.+...-....++...+...+.+++ +..+|..|++
T Consensus 71 ~E~~~l~~l----~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~ 146 (298)
T 3pls_A 71 REGLLMRGL----NHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFV 146 (298)
T ss_dssp HHHHHHHTC----CCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhC----CCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 566555554 2333344444443333334899999999999887543345567776666665655 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+|++|.||++. .++++|||....
T Consensus 147 H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 147 HRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp CSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred cCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 999999999965 599999997643
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=2.3e-09 Score=126.54 Aligned_cols=138 Identities=21% Similarity=0.165 Sum_probs=95.0
Q ss_pred CcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 408 ENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
.+.||.|++|.||+|+.. +|+.||||+........- ....+.+|
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~~e 78 (327)
T 3lm5_A 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQD-----------------------------------CRAEILHE 78 (327)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEE-----------------------------------CHHHHHHH
T ss_pred cceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchH-----------------------------------HHHHHHHH
Confidence 368999999999999976 799999999865322110 00123455
Q ss_pred HHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 487 GRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
++.+.++. +++. +.+-.++ ......+|||||++|.+|.++..-. ...++...+...+.+++ +..+|..|++
T Consensus 79 ~~~l~~l~----~~~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~giv 153 (327)
T 3lm5_A 79 IAVLELAK----SCPRVINLHEVY-ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIV 153 (327)
T ss_dssp HHHHHHTT----TCTTBCCEEEEE-ECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHhcc----CCCCEEEEEEEE-EeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 55555543 3332 2222222 2345568999999999998874211 24567777766666665 7889999999
Q ss_pred ccCCCCCCCCCC------eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~------~v~liDfG~~~ 585 (1578)
|+|++|.|||+. .++++|||...
T Consensus 154 H~Dikp~NIl~~~~~~~~~~kL~Dfg~a~ 182 (327)
T 3lm5_A 154 HLDLKPQNILLSSIYPLGDIKIVDFGMSR 182 (327)
T ss_dssp CSCCCGGGEEESCBTTBCCEEECCGGGCE
T ss_pred cCcCChHHEEEecCCCCCcEEEeeCcccc
Confidence 999999999953 58999999764
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=98.91 E-value=4e-09 Score=126.87 Aligned_cols=135 Identities=15% Similarity=0.170 Sum_probs=90.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+........- ..-.+.+|+
T Consensus 31 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~~E~ 75 (371)
T 2xrw_A 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT-----------------------------------HAKRAYREL 75 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHH-----------------------------------HHHHHHHHH
T ss_pred eeeEecCCEEEEEEEECCCCceEEEEEeccccCChH-----------------------------------HHHHHHHHH
Confidence 68999999999999864 799999999864321100 001224455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-----CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-----STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-----t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.+.++ .+...+.+-.++.... ...+|||||++| .+.+. ....++...+...+.+++ +..+|..|
T Consensus 76 ~~l~~l----~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~~ 147 (371)
T 2xrw_A 76 VLMKCV----NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQV---IQMELDHERMSYLLYQMLCGIKHLHSAG 147 (371)
T ss_dssp HHHHHC----CCTTBCCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHH---HHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhc----CCCCccceEEeeccccccccccceEEEEEcCCC-CHHHH---HhhccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 555444 3333344444543322 245899999987 34333 235677777766666655 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|+|||+. .++++|||....
T Consensus 148 ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 148 IIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp CCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred eecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 99999999999965 599999998643
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=3.8e-09 Score=131.24 Aligned_cols=135 Identities=16% Similarity=0.165 Sum_probs=90.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+......... + .-.+.+|.
T Consensus 68 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~--~---------------------------------~~~~~~E~ 112 (464)
T 3ttj_A 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT--H---------------------------------AKRAYREL 112 (464)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHH--H---------------------------------HHHHHHHH
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEECccccChH--H---------------------------------HHHHHHHH
Confidence 68999999999999854 799999999865422110 0 01123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-----CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-----STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-----t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.+.++ .+...|.+-.++..-. ...+|||||++|... + .....++...+...+.+++ ++.+|..|
T Consensus 113 ~~l~~l----~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~-~---~~~~~l~~~~~~~~~~qil~aL~~lH~~~ 184 (464)
T 3ttj_A 113 VLMKCV----NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC-Q---VIQMELDHERMSYLLYQMLCGIKHLHSAG 184 (464)
T ss_dssp HHHHHC----CCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHH-H---HHTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhC----CCCCCCcEEEEEccCCccccCCeEEEEEeCCCCCHH-H---HHhhcCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 555444 3333344444443221 234899999987522 2 2234577776666666655 88999999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|||+||+|||+. .++++|||....
T Consensus 185 iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 185 IIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp CCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred cccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 99999999999965 699999998643
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=3.1e-09 Score=125.92 Aligned_cols=138 Identities=14% Similarity=0.041 Sum_probs=96.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||+|+........- + ..-.+.+|+
T Consensus 47 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~----------------------------~------~~~~~~~E~ 92 (335)
T 2owb_A 47 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP----------------------------H------QREKMSMEI 92 (335)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSH----------------------------H------HHHHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCH----------------------------H------HHHHHHHHH
Confidence 68999999999999976 689999999865421100 0 011234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+-..+. .....+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 93 ~~l~~l----~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~d 166 (335)
T 2owb_A 93 SIHRSL----AHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHK-RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 166 (335)
T ss_dssp HHHHTC----CCTTBCCEEEEEE-CSSEEEEEECCCTTCBHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHhC----CCCCCCeEEEEEe-cCCeEEEEEecCCCCCHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecC
Confidence 555544 2333233333332 2345689999999999988643 235677777777666666 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 167 lkp~NIl~~~~~~~kl~Dfg~~~~ 190 (335)
T 2owb_A 167 LKLGNLFLNEDLEVKIGDFGLATK 190 (335)
T ss_dssp CCGGGEEECTTCCEEECCCTTCEE
T ss_pred CCchhEEEcCCCCEEEeeccCcee
Confidence 999999964 599999997643
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.91 E-value=3.8e-09 Score=125.92 Aligned_cols=135 Identities=19% Similarity=0.198 Sum_probs=93.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+........ .. .-.+.+|+
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------~~------~~~~~~E~ 74 (353)
T 3coi_A 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE-----------------------------IF------AKRAYREL 74 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSH-----------------------------HH------HHHHHHHH
T ss_pred eeEecCCCeEEEEEEECCCCCEEEEEEecccccch-----------------------------HH------HHHHHHHH
Confidence 78999999999999965 79999999986432110 00 01234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC-----ceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS-----TRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t-----~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.+.++. +...+.+-.++..... .-+|||||++| .+.+. ....++...+...+.+++ +..+|..|
T Consensus 75 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~---~~~~~~~~~~~~i~~qi~~al~~LH~~~ 146 (353)
T 3coi_A 75 LLLKHMQ----HENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKI---MGLKFSEEKIQYLVYQMLKGLKYIHSAG 146 (353)
T ss_dssp HHHHHCC----CTTBCCCSEEECSCSSGGGCCCCEEEEECCSE-EGGGT---TTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhcC----CCCcccHhheEecccccccceeEEEEeccccC-CHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 5555542 3333444444432221 23899999986 55554 234577777777666665 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|.||++. .++++|||....
T Consensus 147 ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 147 VVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred cccCCCCHHHEeECCCCcEEEeecccccC
Confidence 99999999999965 599999997643
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=98.91 E-value=3.5e-09 Score=123.28 Aligned_cols=133 Identities=17% Similarity=0.203 Sum_probs=93.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+..-... +-.+.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-------------------------------------~~~~~~e~ 57 (304)
T 2jam_A 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR-------------------------------------DSSLENEI 57 (304)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEECC-------------------------------------------HHHHHH
T ss_pred eeccCCCCceEEEEEECCCCCEEEEEEEecccccc-------------------------------------hHHHHHHH
Confidence 67999999999999975 89999999986432100 01234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+-.++ ......+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 58 ~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d 131 (304)
T 2jam_A 58 AVLKKIK----HENIVTLEDIY-ESTTHYYLVMQLVSGGELFDRIL-ERGVYTEKDASLVIQQVLSAVKYLHENGIVHRD 131 (304)
T ss_dssp HHHHHCC----CTTBCCEEEEE-ECSSEEEEEECCCCSCBHHHHHH-HHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCS
T ss_pred HHHHhCC----CCCeeehhhhc-ccCCEEEEEEEcCCCccHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 6665542 32223333333 23455689999999999987643 334567777666666655 7889999999999
Q ss_pred CCCCCCCC---C---eeEEecCCch
Q psy12972 566 PHSGNDVN---T---WLYPVDLGDK 584 (1578)
Q Consensus 566 pHPGNilv---~---~v~liDfG~~ 584 (1578)
++|.||++ . .++++|||..
T Consensus 132 ikp~NIl~~~~~~~~~~kl~Dfg~~ 156 (304)
T 2jam_A 132 LKPENLLYLTPEENSKIMITDFGLS 156 (304)
T ss_dssp CCGGGCEESSSSTTCCEEBCSCSTT
T ss_pred CCHHHEEEecCCCCCCEEEccCCcc
Confidence 99999996 2 4899999965
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=2.2e-09 Score=128.20 Aligned_cols=146 Identities=21% Similarity=0.186 Sum_probs=95.2
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||+|++|.||+|+..+|+.||||+.++.....-.... +. + ... .-.+.+|++
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~------------~~---~-----~~~------~~~~~~E~~ 81 (362)
T 3pg1_A 28 RFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNI------------LS---D-----SFL------CKRVLREIR 81 (362)
T ss_dssp EEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEG------------GG---S-----HHH------HHHHHHHHH
T ss_pred EEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhh------------hh---h-----hhH------HHHHHHHHH
Confidence 689999999999999989999999998764332100000 00 0 000 012456676
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCC----CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKS----STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~----t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
.+.+++ +...+.+-.++.... ..-+|||||++| .+.+...-....++...+...+.+++ +..+|..|++
T Consensus 82 ~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 156 (362)
T 3pg1_A 82 LLNHFH----HPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVV 156 (362)
T ss_dssp HHHHCC----CTTBCCCSEEEEECCTTTCCEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHhCC----CcCccceeeeEEeccCCCcceEEEEEccCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCE
Confidence 666653 333344444443221 235899999987 44443322223577777766666665 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.|||+. .++++|||...
T Consensus 157 H~Dlkp~NIl~~~~~~~kl~Dfg~~~ 182 (362)
T 3pg1_A 157 HRDLHPGNILLADNNDITICDFNLAR 182 (362)
T ss_dssp CCCCCGGGEEECTTCCEEECCTTC--
T ss_pred ecCCChHHEEEcCCCCEEEEecCccc
Confidence 999999999965 59999999764
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.91 E-value=1.2e-09 Score=142.06 Aligned_cols=135 Identities=19% Similarity=0.200 Sum_probs=92.0
Q ss_pred cccccccceEEEEEEec--CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK--EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
+.||.|++|.||+|+.+ +|+.||||+..+.-... . .-.+.+|
T Consensus 86 ~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~------------------------------~------~~~~~~E 129 (681)
T 2pzi_A 86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAE------------------------------A------QAMAMAE 129 (681)
T ss_dssp EEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHH------------------------------H------HHHHHHH
T ss_pred EEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHH------------------------------H------HHHHHHH
Confidence 58999999999999975 69999999876432110 0 0123445
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCc----eEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSST----RVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~----~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
++.+.++ .+...+.+-.++.+.... .+|||||++|.+|.+.. ...++...+...+.+++ +..+|..|
T Consensus 130 ~~~l~~l----~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~---~~~l~~~~~~~~~~qi~~aL~~lH~~g 202 (681)
T 2pzi_A 130 RQFLAEV----VHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK---GQKLPVAEAIAYLLEILPALSYLHSIG 202 (681)
T ss_dssp HGGGGGC----CCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC-------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhc----CCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 5444433 233323333333221111 48999999999998863 23678887777777766 88999999
Q ss_pred ccccCCCCCCCCCC--eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT--WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~--~v~liDfG~~~~ 586 (1578)
++|+|+||.|||+. .++++|||....
T Consensus 203 iiHrDlkp~NIll~~~~~kl~DFG~a~~ 230 (681)
T 2pzi_A 203 LVYNDLKPENIMLTEEQLKLIDLGAVSR 230 (681)
T ss_dssp EECCCCSGGGEEECSSCEEECCCTTCEE
T ss_pred CeecccChHHeEEeCCcEEEEecccchh
Confidence 99999999999965 599999997643
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=98.91 E-value=2.3e-09 Score=123.51 Aligned_cols=136 Identities=15% Similarity=0.108 Sum_probs=94.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+..... + ..+-.+.+|+
T Consensus 20 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~-------------------------------~~~~~~~~e~ 65 (284)
T 2vgo_A 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK---E-------------------------------GVEHQLRREI 65 (284)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH---T-------------------------------TCHHHHHHHH
T ss_pred heecCCCCeEEEEEEEcCCCcEEEEEEEcccccch---H-------------------------------HHHHHHHHHH
Confidence 68999999999999975 78999999986532110 0 0011245566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-..+. .....+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 66 ~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d 139 (284)
T 2vgo_A 66 EIQSHLR----HPNILRMYNYFH-DRKRIYLMLEFAPRGELYKELQ-KHGRFDEQRSATFMEELADALHYCHERKVIHRD 139 (284)
T ss_dssp HHHHTCC----CTTBCCEEEEEE-CSSEEEEEECCCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred HHHhcCC----CCCEeeEEEEEE-cCCEEEEEEEeCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence 5555542 222233323332 2345689999999999987643 234577777666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCch
Q psy12972 566 PHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~ 584 (1578)
++|.||++. .++++|||..
T Consensus 140 l~p~Nil~~~~~~~kl~Dfg~~ 161 (284)
T 2vgo_A 140 IKPENLLMGYKGELKIADFGWS 161 (284)
T ss_dssp CSGGGEEECTTCCEEECCCTTC
T ss_pred CCHHHEEEcCCCCEEEeccccc
Confidence 999999964 5999999965
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=98.91 E-value=3.5e-09 Score=127.43 Aligned_cols=135 Identities=19% Similarity=0.220 Sum_probs=91.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+......... .. -.+.+|+
T Consensus 48 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------~~------~~~~~E~ 92 (371)
T 4exu_A 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-----------------------------FA------KRAYREL 92 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHH-----------------------------HH------HHHHHHH
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEecccccchh-----------------------------HH------HHHHHHH
Confidence 67999999999999965 799999999865332110 00 1234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC-----ceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS-----TRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t-----~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.+.++. +...+.+-.++..... .-+|||||++| .+.+ .....++...+...+.+++ +..+|..|
T Consensus 93 ~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~---~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 164 (371)
T 4exu_A 93 LLLKHMQ----HENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQK---IMGMEFSEEKIQYLVYQMLKGLKYIHSAG 164 (371)
T ss_dssp HHHHHCC----CTTBCCCSEEECSCSSSTTCCCCEEEEECCCE-EHHH---HTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhcC----CCCchhhhhheeccCCcccceeEEEEEccccc-cHHH---HhhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 5555543 3333444444433221 12899999986 3433 3345678777777666665 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|.|||+. .++++|||....
T Consensus 165 ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 165 VVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred CcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999999999965 599999998643
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=2e-09 Score=126.76 Aligned_cols=132 Identities=17% Similarity=0.026 Sum_probs=91.1
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+.. |+.||||+.+..-... ..+..|+.
T Consensus 30 ~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 70 (322)
T 3soc_A 30 EVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQS--------------------------------------WQNEYEVY 70 (322)
T ss_dssp EEEECSTTCEEEEEEET-TEEEEEEEECGGGHHH--------------------------------------HHHHHHHH
T ss_pred heecccCceEEEEEEEC-CCEEEEEEeecCchHH--------------------------------------HHHHHHHH
Confidence 68999999999999865 8999999986432110 01122443
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCC---CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHc----
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKS---STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQT---- 559 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~---t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~---- 559 (1578)
.+.++ .+..-+.+-.++.+-. ..-+|||||++|.+|.++. ....++...+...+.++. +..+|..
T Consensus 71 ~l~~l----~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l 144 (322)
T 3soc_A 71 SLPGM----KHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL--KANVVSWNELCHIAETMARGLAYLHEDIPGL 144 (322)
T ss_dssp TSTTC----CCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHH--HHCCBCHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHhcC----CCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 33332 2333333333333211 1247999999999998874 456677777777666665 7788888
Q ss_pred ------CccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 560 ------GFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 560 ------G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|+|++|.|||+. .++++|||...
T Consensus 145 ~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~ 179 (322)
T 3soc_A 145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL 179 (322)
T ss_dssp TTEEECEEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred ccccCCCEEeCCCChHhEEECCCCeEEEccCCccc
Confidence 999999999999965 58999999764
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=98.91 E-value=1.3e-09 Score=129.87 Aligned_cols=140 Identities=16% Similarity=0.139 Sum_probs=89.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+........ +.+. -.+.+|+
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~--------------------------~~~~------~~~~~E~ 63 (346)
T 1ua2_A 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAK--------------------------DGIN------RTALREI 63 (346)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC--------------------------------------C------THHHHHH
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhh--------------------------hhhh------HHHHHHH
Confidence 67999999999999975 7999999998654221100 0000 1234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-.++ ......+|||||++| .+.+........++...+...+.+++ +..+|..|++|+|
T Consensus 64 ~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~D 137 (346)
T 1ua2_A 64 KLLQELS----HPNIIGLLDAF-GHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRD 137 (346)
T ss_dssp HHHHHCC----CTTBCCEEEEE-CCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHhhCC----CCCCCeEEEEE-eeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCC
Confidence 6665542 32223333333 234567899999998 55554322222355555555555554 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|||+. .++++|||....
T Consensus 138 lkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 138 LKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp CCGGGEEECTTCCEEECCCGGGST
T ss_pred CCHHHEEEcCCCCEEEEeccccee
Confidence 999999964 589999997643
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=2e-09 Score=126.60 Aligned_cols=136 Identities=19% Similarity=0.190 Sum_probs=82.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+...... .. -.+.+|+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------~~--------------~~~~~E~ 54 (317)
T 2pmi_A 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEG----------------------TP--------------STAIREI 54 (317)
T ss_dssp --------CEEEEEECSSSCCEEEEEEEECCSTTC----------------------SC--------------HHHHHHH
T ss_pred eEECCCCCEEEEEEEECCCCcEEEEEEeecccccc----------------------cH--------------HHHHHHH
Confidence 57999999999999965 79999999986432110 00 0123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-----cCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-----KGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-----~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.+.++ .+..-+.+-.++ .....-+|||||++| .|.+...... .+++...+...+.+++ +..+|..|
T Consensus 55 ~~l~~l----~hp~iv~~~~~~-~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ 128 (317)
T 2pmi_A 55 SLMKEL----KHENIVRLYDVI-HTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK 128 (317)
T ss_dssp HHHTTC----CBTTBCCEEEEE-CCTTEEEEEEECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhc----CCCCcceEEEEE-EECCeEEEEEEecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 444443 222223332332 223456899999997 6665533222 2466666655555554 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|.|||+. .++++|||....
T Consensus 129 ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 129 ILHRDLKPQNLLINKRGQLKLGDFGLARA 157 (317)
T ss_dssp EECCCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred eeeCCCChHHeEEcCCCCEEECcCcccee
Confidence 99999999999964 599999997643
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=98.90 E-value=2.3e-09 Score=125.81 Aligned_cols=140 Identities=19% Similarity=0.220 Sum_probs=93.1
Q ss_pred cccccccceEEEEEEe--cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIAAASLAQVFRAVT--KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l--~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
+.||.|++|.||+|+. .+|+.||||+.+...... .. ...+.+|
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~--------------------~~---------------~~~~~~e 61 (326)
T 1blx_A 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE--------------------GM---------------PLSTIRE 61 (326)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT--------------------SC---------------BCTHHHH
T ss_pred eeecccccEEEEEEEecCCCCEEEEEEEeccCcccc--------------------cC---------------CchhhHH
Confidence 6899999999999997 478999999987543211 00 0112344
Q ss_pred HHHHHHHHHhhCCCCCeeecEEee----CCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILW----DKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~----~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
++.++++.. +.+..-+.+-.++. +..+..+|||||++| +|.++.... ..+++...+...+.+++ +..+|..
T Consensus 62 ~~~l~~l~~-~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 139 (326)
T 1blx_A 62 VAVLRHLET-FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH 139 (326)
T ss_dssp HHHHHHHHH-TCCTTBCCEEEEEEEEECSSEEEEEEEEECCSC-BHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhhhc-cCCCCeEeeeeeeeecccCCCceEEEEEecCCC-CHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 444555432 22333233333332 123446799999987 666653321 23477777777666666 7889999
Q ss_pred CccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 560 GFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 560 G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|+|++|+||++. .++++|||...
T Consensus 140 gi~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 140 RVVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp TCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 999999999999964 58999999753
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=3.8e-09 Score=122.29 Aligned_cols=138 Identities=14% Similarity=0.041 Sum_probs=95.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||+|+........- + ..-.+.+|+
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~----------------------------~------~~~~~~~e~ 66 (294)
T 2rku_A 21 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP----------------------------H------QREKMSMEI 66 (294)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSH----------------------------H------HHHHHHHHH
T ss_pred EEEeecCCEEEEEEEECCCCceEEEEEechhhccCH----------------------------H------HHHHHHHHH
Confidence 68999999999999976 689999999865431100 0 011234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+-..+. .....+|||||++|.++.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 67 ~~l~~l----~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d 140 (294)
T 2rku_A 67 SIHRSL----AHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHK-RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 140 (294)
T ss_dssp HHHHTC----CCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhC----CCCCEeeeeeeec-cCCEEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 555444 2333233333332 2344579999999999988643 234577777777666665 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||++. .++++|||....
T Consensus 141 l~p~Nil~~~~~~~kl~dfg~~~~ 164 (294)
T 2rku_A 141 LKLGNLFLNEDLEVKIGDFGLATK 164 (294)
T ss_dssp CCGGGEEECTTCCEEECCCTTCEE
T ss_pred CChHhEEEcCCCCEEEEeccCcee
Confidence 999999965 599999997643
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=98.90 E-value=2.4e-09 Score=132.53 Aligned_cols=136 Identities=18% Similarity=0.139 Sum_probs=82.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+......... ..-.+.+|+
T Consensus 59 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~-----------------------------------~~~~~~~E~ 103 (458)
T 3rp9_A 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLI-----------------------------------DCKRILREI 103 (458)
T ss_dssp CC-------CEEEEEECC--CEEEEEEECSTTSSHH-----------------------------------HHHHHHHHH
T ss_pred eEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHH-----------------------------------HHHHHHHHH
Confidence 67999999999999965 899999998854322110 001235566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC----CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK----SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~----~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+.+.++. +...|.+-.++... ...-+|||||++| .|.++.. ....++...+...+.+++ ++.+|..|+
T Consensus 104 ~~l~~l~----h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~i 177 (458)
T 3rp9_A 104 AILNRLN----HDHVVKVLDIVIPKDVEKFDELYVVLEIADS-DFKKLFR-TPVYLTELHIKTLLYNLLVGVKYVHSAGI 177 (458)
T ss_dssp HHHHHCC----CTTBCCEEEECCCSCTTTCCCEEEEECCCSE-EHHHHHH-SSCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhCC----CCCCCceEEEEecCCcccCceEEEEEecccc-chhhhcc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 6666652 33333333333211 1345899999865 5544422 223467776666666665 889999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|||+||+|||+. .++++|||...
T Consensus 178 iHrDlKp~NILl~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 178 LHRDLKPANCLVNQDCSVKVCDFGLAR 204 (458)
T ss_dssp BCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred CCCCCChhhEEECCCCCEeecccccch
Confidence 9999999999965 58999999764
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=3.8e-09 Score=124.56 Aligned_cols=137 Identities=15% Similarity=0.048 Sum_probs=94.7
Q ss_pred cccccccceEEEEEEec-CC-----CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK-EG-----VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G-----~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+.. +| +.||||+.++..... ..-.
T Consensus 52 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 95 (333)
T 2i1m_A 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD------------------------------------EKEA 95 (333)
T ss_dssp EEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHH------------------------------------HHHH
T ss_pred eEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChH------------------------------------HHHH
Confidence 67999999999999964 33 489999987543210 0112
Q ss_pred HHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHh-------------hcCCCHHHHHHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-------------EKGFSLADVDRKL 548 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-------------~~~~~~~~v~~~l 548 (1578)
+.+|++.+.++. .++. +.+-.++ .....-+|||||++|.+|.++..-. ...++...+...+
T Consensus 96 ~~~E~~~l~~l~----~h~~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (333)
T 2i1m_A 96 LMSELKIMSHLG----QHENIVNLLGAC-THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170 (333)
T ss_dssp HHHHHHHHHHHC----CCTTBCCEEEEE-CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHH
T ss_pred HHHHHHHHHhhc----CCCCeeeEEEEE-ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHH
Confidence 456777776662 2332 2222222 2345678999999999998875422 1235666666666
Q ss_pred HHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 549 FTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 549 ~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
.+++ +..+|..|++|+|++|.|||+. .++++|||....
T Consensus 171 ~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 213 (333)
T 2i1m_A 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 213 (333)
T ss_dssp HHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCC
T ss_pred HHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccc
Confidence 6655 7889999999999999999975 589999997643
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=2.9e-09 Score=123.85 Aligned_cols=131 Identities=14% Similarity=0.060 Sum_probs=88.8
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+....- .+.+|.
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------------------------------------------~~~~e~ 61 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP------------------------------------------KARREV 61 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECSH------------------------------------------HHHHHH
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecccH------------------------------------------HHHHHH
Confidence 6799999999999996 489999999975310 012333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC---CCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK---SSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~---~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
..+.+. ..+...+.+-.++... ...-+|||||++|.+|.+...... ..++...+...+.+++ +..+|..|+
T Consensus 62 ~~~~~~---~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 138 (299)
T 3m2w_A 62 ELHWRA---SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138 (299)
T ss_dssp HHHHHH---TTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHh---ccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 333222 1222333333443321 233579999999999988744221 2477777777666665 788999999
Q ss_pred cccCCCCCCCCCCe------eEEecCCch
Q psy12972 562 VHADPHSGNDVNTW------LYPVDLGDK 584 (1578)
Q Consensus 562 vH~DpHPGNilv~~------v~liDfG~~ 584 (1578)
+|+|++|.||++.. ++++|||..
T Consensus 139 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 139 AHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp ECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred ccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999652 777777754
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=2.4e-09 Score=134.03 Aligned_cols=145 Identities=16% Similarity=0.143 Sum_probs=95.3
Q ss_pred ChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHH
Q psy12972 398 THSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVP 476 (1578)
Q Consensus 398 ~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 476 (1578)
.+.+.|.-. +.||.|++|.||+|+.+ +|+.||||+.+...... . .
T Consensus 34 ~~~~~y~~~--~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--------------------~-~----------- 79 (494)
T 3lij_A 34 HLSEMYQRV--KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST--------------------S-S----------- 79 (494)
T ss_dssp CHHHHEEEE--EEEECC---EEEEEEETTTCCEEEEEEEEC-------------------------C-T-----------
T ss_pred chhcCeEEe--eEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc--------------------h-H-----------
Confidence 345556554 68999999999999975 79999999986432110 0 0
Q ss_pred HHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HH
Q psy12972 477 LEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 477 l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~ 554 (1578)
.-.+.+|++.+.++ .+...+.+-.++. .....+|||||++|.+|.+... ....++...+...+.+++ +.
T Consensus 80 ---~~~~~~E~~~l~~l----~hpniv~~~~~~~-~~~~~~lv~e~~~~g~L~~~~~-~~~~~~~~~~~~i~~qi~~~l~ 150 (494)
T 3lij_A 80 ---NSKLLEEVAVLKLL----DHPNIMKLYDFFE-DKRNYYLVMECYKGGELFDEII-HRMKFNEVDAAVIIKQVLSGVT 150 (494)
T ss_dssp ---THHHHHHHHHHTTC----CCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHhC----CCCCCCeEEEEEE-eCCEEEEEEecCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHH
Confidence 01234555555444 2333333333332 2345689999999999877542 345677776666666655 78
Q ss_pred HHHHcCccccCCCCCCCCCC------eeEEecCCchh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~------~v~liDfG~~~ 585 (1578)
.+|..|++|+|+||.|||+. .++++|||...
T Consensus 151 ~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 151 YLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp HHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred HHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 89999999999999999974 28999999763
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=5e-09 Score=123.07 Aligned_cols=137 Identities=15% Similarity=0.101 Sum_probs=91.8
Q ss_pred cccccccceEEEEEEe--cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIAAASLAQVFRAVT--KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l--~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
+.||.|++|.||+|+. .+|+.||||+.+..-.. . -.+.+|
T Consensus 20 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~--------------------------------~------~~~~~e 61 (339)
T 1z57_A 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRY--------------------------------C------EAARSE 61 (339)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHH--------------------------------H------HHHHHH
T ss_pred EEEecCCCeEEEEEEecCCCCcEEEEEEEecCCch--------------------------------h------HHHHHH
Confidence 6799999999999986 37899999998642110 0 113456
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
++.++++...-. .....+++++.. ....-+|||||+ |.++.+...-.. ..++...+...+.+++ +..+|..|+
T Consensus 62 ~~~l~~l~~~~~-~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 139 (339)
T 1z57_A 62 IQVLEHLNTTDP-NSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKL 139 (339)
T ss_dssp HHHHHHHHHHCT-TCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHhhhcCC-CCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCC
Confidence 666666654311 111223333322 234568999999 777777643211 2466776666666665 788999999
Q ss_pred cccCCCCCCCCCC----------------------eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT----------------------WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~----------------------~v~liDfG~~~ 585 (1578)
+|+|++|.|||+. .++++|||...
T Consensus 140 vH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~ 185 (339)
T 1z57_A 140 THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT 185 (339)
T ss_dssp ECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCE
T ss_pred cCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccc
Confidence 9999999999964 37889999753
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=98.90 E-value=1.3e-09 Score=129.06 Aligned_cols=142 Identities=15% Similarity=0.102 Sum_probs=91.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+........+ ..-.+.+|+
T Consensus 32 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~--------------------------------~~~~~~~E~ 79 (345)
T 3hko_A 32 GAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPK--------------------------------DVERIKTEV 79 (345)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---C--------------------------------HHHHHHHHH
T ss_pred ceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHH--------------------------------HHHHHHHHH
Confidence 68999999999999964 789999999875422110000 011346677
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh--------------------------------
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-------------------------------- 535 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-------------------------------- 535 (1578)
+.+.++. +...+.+-.++. .....+|||||++|.+|.+.....
T Consensus 80 ~~l~~l~----hpniv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (345)
T 3hko_A 80 RLMKKLH----HPNIARLYEVYE-DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSI 154 (345)
T ss_dssp HHHHHCC----CTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC
T ss_pred HHHHhCC----CCCcceeehhhc-cCCeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccccccccccccc
Confidence 7776653 322233333332 234468999999999998764200
Q ss_pred -------hcCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC-----eeEEecCCchhhh
Q psy12972 536 -------EKGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT-----WLYPVDLGDKFRL 587 (1578)
Q Consensus 536 -------~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~-----~v~liDfG~~~~l 587 (1578)
...++...+...+.+++ +..+|..|++|+|++|.|||+. .++++|||....+
T Consensus 155 ~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~ 220 (345)
T 3hko_A 155 HGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEF 220 (345)
T ss_dssp --CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEG
T ss_pred ccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccc
Confidence 00012233333444444 7889999999999999999973 5899999976543
|
| >1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10 | Back alignment and structure |
|---|
Probab=98.90 E-value=4.2e-09 Score=106.82 Aligned_cols=87 Identities=17% Similarity=0.361 Sum_probs=77.7
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc----------------------chhhHhHcCcccc
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------EQGLARRLGVGSQ 929 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~----------------------~~~L~~k~gV~~~ 929 (1578)
.+++++|.||++||++|+...|.++++++.+. ++.+..|+++. +..++++|+|.+
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~- 99 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPW- 99 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCS-
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCC-
Confidence 36799999999999999999999999999997 59999999977 678999999997
Q ss_pred CCcEEEE-cCCccccccC---CCCCHHHHHHHHHhhC
Q psy12972 930 LPQIALL-TDGRTSFFKE---PSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 930 ~PTl~lf-~~G~~~~y~~---G~~s~~~L~~fi~~~l 962 (1578)
+|+++++ ++|+.. .+. |..+.++|.+++++.+
T Consensus 100 ~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 100 QPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp SSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred CCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 9999999 788877 777 8899999999998754
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=3.1e-09 Score=122.66 Aligned_cols=136 Identities=22% Similarity=0.188 Sum_probs=95.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+........ .. .-.+.+|+
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~---------------------~~--------------~~~~~~e~ 72 (287)
T 2wei_A 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN---------------------KD--------------TSTILREV 72 (287)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSS---------------------SC--------------HHHHHHHH
T ss_pred EEEcCCCCEEEEEEEEcCCCcEEEEEEecccccch---------------------HH--------------HHHHHHHH
Confidence 68999999999999976 79999999986543211 00 01234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+-.++. .....++||||++|.++.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 73 ~~l~~l----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~d 146 (287)
T 2wei_A 73 ELLKKL----DHPNIMKLFEILE-DSSSFYIVGELYTGGELFDEII-KRKRFSEHDAARIIKQVFSGITYMHKHNIVHRD 146 (287)
T ss_dssp HHHHTC----CCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHhc----cCCCccEEEEEEe-CCCeEEEEEEccCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 555554 2322233333332 2355689999999999877543 345677777777666665 7889999999999
Q ss_pred CCCCCCCCC------eeEEecCCchh
Q psy12972 566 PHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~------~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 147 l~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 147 LKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp CCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred CChhhEEEecCCCcccEEEeccCcce
Confidence 999999973 48999999653
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.90 E-value=2.1e-09 Score=125.72 Aligned_cols=131 Identities=17% Similarity=0.155 Sum_probs=90.4
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+. .|+.||||+....-. .-.|.+|++
T Consensus 14 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~---------------------------------------~~~~~~E~~ 53 (307)
T 2eva_A 14 EVVGRGAFGVVCKAKW-RAKDVAIKQIESESE---------------------------------------RKAFIVELR 53 (307)
T ss_dssp EEEECCSSSEEEEEEE-TTEEEEEEECSSTTH---------------------------------------HHHHHHHHH
T ss_pred eEeecCCCceEEEEEE-CCeeEEEEEecChhH---------------------------------------HHHHHHHHH
Confidence 6799999999999986 488999998753210 012455666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh--cCCCHHHHHHHHHHHH--HHHHHH---cCc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE--KGFSLADVDRKLFTAF--AEQIFQ---TGF 561 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~--~~~~~~~v~~~l~~~~--l~~i~~---~G~ 561 (1578)
.+.++. ++. |.+++.......+|||||++|.+|.++..-.. ...+...+...+.++. +..+|. .|+
T Consensus 54 ~l~~l~-----hp~--iv~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~i 126 (307)
T 2eva_A 54 QLSRVN-----HPN--IVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126 (307)
T ss_dssp HHHHCC-----CTT--BCCEEEBCTTTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCC
T ss_pred HHhcCC-----CCC--cCeEEEEEcCCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCe
Confidence 666552 232 34455545566789999999999988743111 1245666666555544 778888 899
Q ss_pred cccCCCCCCCCCC----eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT----WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~----~v~liDfG~~~~ 586 (1578)
+|+|++|.|||+. .++++|||....
T Consensus 127 vH~dlkp~NIll~~~~~~~kl~Dfg~~~~ 155 (307)
T 2eva_A 127 IHRDLKPPNLLLVAGGTVLKICDFGTACD 155 (307)
T ss_dssp CCCCCSGGGEEEETTTTEEEECCCCC---
T ss_pred ecCCCChhHEEEeCCCCEEEEcccccccc
Confidence 9999999999963 379999998643
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=3.2e-09 Score=123.84 Aligned_cols=138 Identities=18% Similarity=0.119 Sum_probs=90.4
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.++.-... . ...-++.+|+
T Consensus 38 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-----------------------~-----------~~~~~~~~E~ 83 (310)
T 2wqm_A 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD-----------------------A-----------KARADCIKEI 83 (310)
T ss_dssp EEEECC--CEEEEEEETTTCCEEEEEEECTTSSCC-----------------------H-----------HHHHHHHHHH
T ss_pred EeecCCCCceEEEEEEcCCCceEEEEeeehhhccC-----------------------H-----------HHHHHHHHHH
Confidence 6899999999999996 489999999986521100 0 0011345566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh---hcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL---EKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~---~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+.+.++. +...+.+-..+. .....+|||||++|.+|.++.... ...++...+...+.+++ +..+|..|++
T Consensus 84 ~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~ 158 (310)
T 2wqm_A 84 DLLKQLN----HPNVIKYYASFI-EDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVM 158 (310)
T ss_dssp HHHHTCC----CTTBCCEEEEEE-ETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHhCC----CCCEeeEEEEEE-cCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCee
Confidence 6665542 222223223322 134567999999999998875421 23467777666666655 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.||++. .++++|||...
T Consensus 159 H~dl~p~NIl~~~~~~~kl~Dfg~~~ 184 (310)
T 2wqm_A 159 HRDIKPANVFITATGVVKLGDLGLGR 184 (310)
T ss_dssp CCCCCGGGEEECTTSCEEECCC----
T ss_pred CCCCcHHHEEEcCCCCEEEEecccee
Confidence 999999999965 59999999764
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.90 E-value=3.5e-09 Score=128.93 Aligned_cols=146 Identities=12% Similarity=0.087 Sum_probs=92.4
Q ss_pred CCChhhhccccCCcccccccceEEEEEEec---CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHH
Q psy12972 396 GCTHSQLFRSFDENPIAAASLAQVFRAVTK---EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINE 472 (1578)
Q Consensus 396 G~~~~~iF~~fd~~PlasaSiaQVhrA~l~---~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e 472 (1578)
...+.+.|.. ..+.||.|++|.||+|+.+ +|+.||||+....-..
T Consensus 15 ~~~~~~~y~~-~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~------------------------------- 62 (405)
T 3rgf_A 15 RERVEDLFEY-EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS------------------------------- 62 (405)
T ss_dssp CCCHHHHEEC-SSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC-------------------------------
T ss_pred hhhhhhhhhh-cCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC-------------------------------
Confidence 4567777764 3468999999999999965 6899999987532100
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeC-CCCceEEEEeccCCCcCCchhhHhh--------cCCCHHH
Q psy12972 473 LKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWD-KSSTRVLTTEFIDGVKISDKEGLLE--------KGFSLAD 543 (1578)
Q Consensus 473 ~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~-~~t~~VLVME~i~G~~l~d~~~l~~--------~~~~~~~ 543 (1578)
-.+.+|++.+.++. +...+.+-.++.. -...-+|||||++| .+.+...... ..++...
T Consensus 63 --------~~~~~E~~~l~~l~----hpniv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~ 129 (405)
T 3rgf_A 63 --------MSACREIALLRELK----HPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGM 129 (405)
T ss_dssp --------HHHHHHHHHHHHCC----CTTBCCCCEEEEETTTTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHH
T ss_pred --------HHHHHHHHHHHhcC----CCCeeeEeeEEecCCCCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHH
Confidence 01245666665553 3333444445432 23456799999987 4444322111 1366666
Q ss_pred HHHHHHHHH--HHHHHHcCccccCCCCCCCCC-------CeeEEecCCchhh
Q psy12972 544 VDRKLFTAF--AEQIFQTGFVHADPHSGNDVN-------TWLYPVDLGDKFR 586 (1578)
Q Consensus 544 v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv-------~~v~liDfG~~~~ 586 (1578)
+...+.+++ +..+|..|++|+|+||.|||+ +.++++|||....
T Consensus 130 ~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 181 (405)
T 3rgf_A 130 VKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 181 (405)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC-
T ss_pred HHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCcee
Confidence 666666655 788999999999999999998 3699999997643
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=1.6e-09 Score=130.17 Aligned_cols=140 Identities=14% Similarity=0.075 Sum_probs=86.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.++..... ..+ .-.++.|+
T Consensus 68 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~---------------------------------~~~~~~E~ 113 (371)
T 3q60_A 68 EPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENS-RSE---------------------------------LERLHEAT 113 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTH-HHH---------------------------------HHHHHHHH
T ss_pred eeccCCCCEEEEEEEECCCCceeEEEEEEeccccc-ccH---------------------------------HHHHHHHH
Confidence 68999999999999965 89999999998753211 000 01234555
Q ss_pred HHHHHHHHhhCCCC------Ceeec-EEeeCCC----------------CceEEEEeccCCCcCCchhhHhhcCCCHHHH
Q psy12972 488 RNAERCSKDLAHLP------YVYIP-RILWDKS----------------STRVLTTEFIDGVKISDKEGLLEKGFSLADV 544 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~------~v~vP-~v~~~~~----------------t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v 544 (1578)
+.+..++. .+.. .+.+| .++..-. ..-+|||||++ .+|.++..-..........
T Consensus 114 ~~~~~l~~--~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~ 190 (371)
T 3q60_A 114 FAAARLLG--ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGD 190 (371)
T ss_dssp HHHHHHHC------------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHH
T ss_pred HHHHHhcc--cChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhh
Confidence 55555543 1111 12222 2221100 22589999998 5888775432222222211
Q ss_pred ------HHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 545 ------DRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 545 ------~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
...+.+++ +..+|..|++|+|+||.|||+. .++++|||...
T Consensus 191 ~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~ 242 (371)
T 3q60_A 191 EGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALW 242 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEE
T ss_pred hhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceee
Confidence 12223333 7889999999999999999964 59999999764
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.89 E-value=3.6e-09 Score=122.87 Aligned_cols=139 Identities=19% Similarity=0.185 Sum_probs=93.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+....... -..+-.+.+|+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~---------------------------------~~~~~~~~~E~ 57 (305)
T 2wtk_C 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRI---------------------------------PNGEANVKKEI 57 (305)
T ss_dssp CEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHS---------------------------------TTHHHHHHHHH
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEecccccccc---------------------------------chhHHHHHHHH
Confidence 68999999999999964 799999999864321100 00112345666
Q ss_pred HHHHHHHHhhCCCCCeeecEEee-CCCCceEEEEeccCCCcCCchh-hHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW-DKSSTRVLTTEFIDGVKISDKE-GLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~-~~~t~~VLVME~i~G~~l~d~~-~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+.++ .+...+.+-.++. +-....+|||||++|. +.+.. ......++...+...+.+++ +..+|..|++|
T Consensus 58 ~~l~~l----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H 132 (305)
T 2wtk_C 58 QLLRRL----RHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVH 132 (305)
T ss_dssp HHHTTC----CCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHhc----CCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 666554 2333344444442 2234568999999987 44432 22234577777666666655 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|.||++. .++++|||...
T Consensus 133 ~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 133 KDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp SCCSGGGEEECTTCCEEECCCTTCE
T ss_pred cCCCcccEEEcCCCcEEeecccccc
Confidence 99999999964 58999999764
|
| >3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0 | Back alignment and structure |
|---|
Probab=98.89 E-value=3.3e-09 Score=108.74 Aligned_cols=86 Identities=21% Similarity=0.406 Sum_probs=77.3
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc-------------------------chhhHhHcCc
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-------------------------EQGLARRLGV 926 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~-------------------------~~~L~~k~gV 926 (1578)
..++++|.||++||++|+...|.+.++++.+...++.+..|+++. +..+++.|+|
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 578999999999999999999999999999986669999999964 5689999999
Q ss_pred cccCCcEEEE-cCCccccccCCCCCHHHHHHHH
Q psy12972 927 GSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 927 ~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi 958 (1578)
.+ +|+++++ ++|+....+.|..+.++|.+++
T Consensus 113 ~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 113 IT-IPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp CE-ESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred Cc-cCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 98 9999999 8898877777989999998886
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=3.6e-09 Score=130.11 Aligned_cols=136 Identities=19% Similarity=0.165 Sum_probs=91.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+..-.. . -.+..|.
T Consensus 103 ~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~--------------------------------~------~~~~~E~ 144 (429)
T 3kvw_A 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRF--------------------------------H------RQAAEEI 144 (429)
T ss_dssp EEEEESSSEEEEEEEETTTTEEEEEEEECSCHHH--------------------------------H------HHHHHHH
T ss_pred EEcccCccEEEEEEEECCCCcEEEEEEECCccch--------------------------------H------HHHHHHH
Confidence 68999999999999865 6999999998653110 0 1124455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+.++.++..- ......|.+++..+ ...-+|||||++| .+.++.... ..+++...+...+.+++ +..+|..|++
T Consensus 145 ~~l~~l~~~~-~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 222 (429)
T 3kvw_A 145 RILEHLRKQD-KDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRII 222 (429)
T ss_dssp HHHHHHHTTC-TTSCSCBCCEEEEEEETTEEEEEECCCCC-BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEE
T ss_pred HHHHHHhhcc-ccCCcCEEEEEeecccCCeEEEEEeccCC-CHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5555555321 11222334443322 3456799999976 565543322 23477777666666655 7889999999
Q ss_pred ccCCCCCCCCCC---e--eEEecCCch
Q psy12972 563 HADPHSGNDVNT---W--LYPVDLGDK 584 (1578)
Q Consensus 563 H~DpHPGNilv~---~--v~liDfG~~ 584 (1578)
|+|+||.|||+. . ++++|||..
T Consensus 223 HrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 223 HCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp CSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred cCCCCHHHeEEccCCCcceEEeecccc
Confidence 999999999965 2 899999976
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.89 E-value=7.6e-10 Score=130.53 Aligned_cols=135 Identities=17% Similarity=0.161 Sum_probs=88.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+....... ...+.+|+
T Consensus 8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~~~~E~ 51 (324)
T 3mtl_A 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGA------------------------------------PCTAIREV 51 (324)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECC------------------------------------------CCCCCCCH
T ss_pred EEEcCCCCEEEEEEEECCCCcEEEEEEEeccccccc------------------------------------chhHHHHH
Confidence 57999999999999976 899999999864322110 00112344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+-.++ ......+|||||++| .+.+...-....++...+...+.+++ +..+|..|++|+|
T Consensus 52 ~~l~~l----~h~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~D 125 (324)
T 3mtl_A 52 SLLKDL----KHANIVTLHDII-HTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRD 125 (324)
T ss_dssp HHHSCC----CCTTBCCEEEEE-ECSSCEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESS
T ss_pred HHHHhc----CCCCCCeeeeEE-eeCCEEEEEeccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCC
Confidence 444333 222223332333 223456899999987 55554332233467676666665655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 126 ikp~NIl~~~~~~~kl~Dfg~a~ 148 (324)
T 3mtl_A 126 LKPQNLLINERGELKLADFGLAR 148 (324)
T ss_dssp CCGGGEEECTTCCEEECSSSEEE
T ss_pred cCHHHEEECCCCCEEEccCcccc
Confidence 999999964 59999999753
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=1.6e-09 Score=128.93 Aligned_cols=138 Identities=21% Similarity=0.246 Sum_probs=92.3
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+........ .. ...+.+|+
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--------------------~~---------------~~~~~~E~ 67 (351)
T 3mi9_A 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE--------------------GF---------------PITALREI 67 (351)
T ss_dssp EECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS--------------------SS---------------CHHHHHHH
T ss_pred EEEecCCCcEEEEEEECCCCCEEEEEEEecccccc--------------------cc---------------hHHHHHHH
Confidence 6799999999999997 489999999875432110 00 01234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC-------CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK-------SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~-------~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
+.+.++. +...+.+-.++... .+.-+|||||++| .+.+........++...+...+.+++ +..+|.
T Consensus 68 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~ 142 (351)
T 3mi9_A 68 KILQLLK----HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 142 (351)
T ss_dssp HHHHHCC----CTTBCCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcc----CCCcccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 6665553 33333333333321 2345799999987 44333222234577777766666665 788999
Q ss_pred cCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 559 TGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
.|++|+|++|.|||+. .++++|||....
T Consensus 143 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 173 (351)
T 3mi9_A 143 NKILHRDMKAANVLITRDGVLKLADFGLARA 173 (351)
T ss_dssp TTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CCeeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence 9999999999999965 599999997643
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=98.89 E-value=3.3e-09 Score=127.63 Aligned_cols=136 Identities=17% Similarity=0.181 Sum_probs=83.6
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|.||+|+. .+|+.||||+......... ..-.+.+|+
T Consensus 35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~-----------------------------------~~~~~~~E~ 79 (367)
T 2fst_X 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII-----------------------------------HAKRTYREL 79 (367)
T ss_dssp EECC----CCEEEEEETTTTEEEEEEECSSTTSSHH-----------------------------------HHHHHHHHH
T ss_pred eEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHH-----------------------------------HHHHHHHHH
Confidence 6899999999999985 5899999999864322100 001224455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC-----CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK-----SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~-----~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.+.++. +...+.+-.++... ...-+||||++ |.+|.++. ....++...+...+.+++ +..+|..|
T Consensus 80 ~~l~~l~----hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g 152 (367)
T 2fst_X 80 RLLKHMK----HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 152 (367)
T ss_dssp HHHHHCC----CTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCC----CCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 5555542 33334444444321 13458999999 77888764 345677777766666665 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|+|||+. .++++|||....
T Consensus 153 ivH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 153 IIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCCCCCCGGGEEECTTCCEEECC------
T ss_pred eeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 99999999999965 599999997643
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=98.88 E-value=3.3e-09 Score=122.25 Aligned_cols=137 Identities=19% Similarity=0.146 Sum_probs=88.8
Q ss_pred cccccccceEEEEEEec--CCC--EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK--EGV--EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--~G~--~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|+.. +|+ .||||+.++.....- ...-++.
T Consensus 24 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~----------------------------------~~~~~~~ 69 (291)
T 1u46_A 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQP----------------------------------EAMDDFI 69 (291)
T ss_dssp EECC----CCCEEEEEECTTSCEEEEEEEC--------C----------------------------------HHHHHHH
T ss_pred eeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCH----------------------------------HHHHHHH
Confidence 67999999999999853 344 699998876432100 0011345
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++. +..-+.+-.++. ....++||||++|.+|.+...-....++...+...+.+++ +..+|..|++
T Consensus 70 ~e~~~l~~l~----h~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 143 (291)
T 1u46_A 70 REVNAMHSLD----HRNLIRLYGVVL--TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 143 (291)
T ss_dssp HHHHHHHHCC----CTTBCCEEEEEC--SSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhCC----CCCcccEEEEEc--cCCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 6666666652 333334434432 3446899999999999887544345577777777666666 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.||++. .++++|||...
T Consensus 144 H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 144 HRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp CSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred cCCCchheEEEcCCCCEEEccccccc
Confidence 999999999964 58999999754
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.88 E-value=5.2e-09 Score=122.39 Aligned_cols=135 Identities=14% Similarity=0.070 Sum_probs=91.9
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+....-... .-.+.+|+
T Consensus 35 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------------------------------------~~~~~~E~ 77 (317)
T 2buj_A 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQD-------------------------------------REEAQREA 77 (317)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHH-------------------------------------HHHHHHHH
T ss_pred EEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHH-------------------------------------HHHHHHHH
Confidence 6899999999999996 589999999876532110 01234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC---CCCceEEEEeccCCCcCCchhhHh---hcCCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD---KSSTRVLTTEFIDGVKISDKEGLL---EKGFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~---~~t~~VLVME~i~G~~l~d~~~l~---~~~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
+.+.++ .+..-+.+-..+.. .....++||||++|.+|.+..... ...++...+...+.+++ +..+|..
T Consensus 78 ~~l~~l----~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~ 153 (317)
T 2buj_A 78 DMHRLF----NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK 153 (317)
T ss_dssp HHHHTC----CCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhc----CCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 555444 23222333333321 123457999999999998865421 24577777777666665 7889999
Q ss_pred CccccCCCCCCCCCC---eeEEecCCch
Q psy12972 560 GFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 560 G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
|++|+|++|.||++. .++++|||..
T Consensus 154 ~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 154 GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 999999999999974 5999999964
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.88 E-value=5.5e-09 Score=122.24 Aligned_cols=137 Identities=17% Similarity=0.143 Sum_probs=94.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+..+..... .+.. -.+.+|+
T Consensus 40 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----------------------------~~~~------~~~~~e~ 85 (309)
T 2h34_A 40 RLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSD----------------------------PVFR------TRMQREA 85 (309)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGS----------------------------HHHH------HHHHHHH
T ss_pred EEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccC----------------------------HHHH------HHHHHHH
Confidence 68999999999999965 79999999987543211 0001 1234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+-.++. .....+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 86 ~~l~~l----~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d 159 (309)
T 2h34_A 86 RTAGRL----QEPHVVPIHDFGE-IDGQLYVDMRLINGVDLAAMLR-RQGPLAPPRAVAIVRQIGSALDAAHAAGATHRD 159 (309)
T ss_dssp HHHTTC----CCTTBCCEEEEEE-ETTEEEEEEECCCCEEHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHhhc----CCCCeeEEEEEEe-eCCeEEEEEEecCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCC
Confidence 555443 2222233323322 2355689999999999988743 234577777766666665 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 160 lkp~NIl~~~~~~~kl~Dfg~~~ 182 (309)
T 2h34_A 160 VKPENILVSADDFAYLVDFGIAS 182 (309)
T ss_dssp CCGGGEEECTTSCEEECSCCC--
T ss_pred CChHHEEEcCCCCEEEecCccCc
Confidence 999999964 59999999764
|
| >2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... | Back alignment and structure |
|---|
Probab=98.88 E-value=2.3e-09 Score=124.12 Aligned_cols=137 Identities=18% Similarity=0.174 Sum_probs=89.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+...... .. .-.+.+|+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------------------------~~------~~~~~~e~ 53 (299)
T 2r3i_A 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-----------------------------GV------PSTAIREI 53 (299)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC-------------------------------------C------CHHHHHHH
T ss_pred hhhccCCCeeEEEEEEcCCCceEEEEEeecCccch-----------------------------hh------HHHHHHHH
Confidence 67999999999999976 79999999886432110 00 01234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++ .+..-+.+-.++. ....-+|||||++| ++.+...... .+++...+...+.+++ +..+|..|++|+
T Consensus 54 ~~l~~l----~h~~i~~~~~~~~-~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 127 (299)
T 2r3i_A 54 SLLKEL----NHPNIVKLLDVIH-TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127 (299)
T ss_dssp HHHTTC----CCTTBCCEEEEEE-ETTEEEEEEECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHc----CCCCeeeEEEEEe-cCCceEEEEEcccC-CHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCC
Confidence 555443 2222223323332 23456899999986 6666533221 3567666666665555 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.||++. .++++|||....
T Consensus 128 dlkp~Nili~~~~~~kl~dfg~~~~ 152 (299)
T 2r3i_A 128 DLKPQNLLINTEGAIKLADFGLARA 152 (299)
T ss_dssp CCCGGGEEECTTSCEEECSTTHHHH
T ss_pred CCCHHHeEEcCCCCEEECcchhhhh
Confidence 9999999964 599999997644
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=2.6e-09 Score=124.81 Aligned_cols=140 Identities=17% Similarity=0.171 Sum_probs=91.5
Q ss_pred cccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+.. +|+.||||+.++.....- ..-.+.
T Consensus 40 ~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~ 84 (313)
T 3brb_A 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQR-----------------------------------EIEEFL 84 (313)
T ss_dssp EEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHH-----------------------------------HHHHHH
T ss_pred cceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchh-----------------------------------HHHHHH
Confidence 57999999999999865 456899999865421100 001245
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCC----ceEEEEeccCCCcCCchhhHh-----hcCCCHHHHHHHHHHHH--H
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSS----TRVLTTEFIDGVKISDKEGLL-----EKGFSLADVDRKLFTAF--A 553 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t----~~VLVME~i~G~~l~d~~~l~-----~~~~~~~~v~~~l~~~~--l 553 (1578)
+|++.+.++. +...+.+-.++.+... ..++||||++|.+|.++.... ...++...+...+.+++ +
T Consensus 85 ~e~~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL 160 (313)
T 3brb_A 85 SEAACMKDFS----HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160 (313)
T ss_dssp HHHHHHHTCC----CTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC----CCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHH
Confidence 5666665553 3333444444433221 238999999999998875321 23467777777666665 7
Q ss_pred HHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 554 EQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 554 ~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
..+|..|++|+|++|.||++. .++++|||....+
T Consensus 161 ~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~ 197 (313)
T 3brb_A 161 EYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKI 197 (313)
T ss_dssp HHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC---
T ss_pred HHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceec
Confidence 889999999999999999965 5999999976443
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=1.6e-09 Score=127.62 Aligned_cols=136 Identities=15% Similarity=0.054 Sum_probs=89.8
Q ss_pred cccccccceEEEEEEec-CCCE----EEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVE----VAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~----VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|.||+|+.. +|+. ||+|+........ .. -.+
T Consensus 19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~--------------------~~----------------~~~ 62 (325)
T 3kex_A 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQ--------------------SF----------------QAV 62 (325)
T ss_dssp EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCS--------------------CB----------------CSC
T ss_pred eeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHH--------------------HH----------------HHH
Confidence 68999999999999964 6665 7777664322110 00 012
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
.+|++.+.++ .+..-+.+-.++. ....++||||++|.+|.+...-....++...+...+.+++ +..+|..|+
T Consensus 63 ~~e~~~l~~l----~h~~iv~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 136 (325)
T 3kex_A 63 TDHMLAIGSL----DHAHIVRLLGLCP--GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGM 136 (325)
T ss_dssp CHHHHHHHTC----CCTTBCCEEEEEC--BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcC----CCCCcCeEEEEEc--CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3444444333 2322233323321 3456799999999999887543234566666666655555 888999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|+||.|||+. .++++|||....
T Consensus 137 vH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 137 VHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp CCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred CCCccchheEEECCCCeEEECCCCcccc
Confidence 9999999999974 599999998743
|
| >2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae} | Back alignment and structure |
|---|
Probab=98.87 E-value=1.8e-09 Score=113.68 Aligned_cols=89 Identities=16% Similarity=0.293 Sum_probs=76.1
Q ss_pred CCCcEEEEEE-cCCCcccccccHHH---HHHHHHhCCCceEEEEEECccch-----------hhHhHcCccccCCcEEEE
Q psy12972 872 YTTPHLILFY-SDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVHNEQ-----------GLARRLGVGSQLPQIALL 936 (1578)
Q Consensus 872 ~~~~~LV~Fy-apwCg~Ck~l~p~~---~~lA~~l~~~~v~~a~VDc~~~~-----------~L~~k~gV~~~~PTl~lf 936 (1578)
.+++++|.|| ++||++|+.+.|.+ .++++.+.. ++.++.||++... +++++|+|.+ +||++++
T Consensus 46 ~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~-~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~-~Pt~~~~ 123 (154)
T 2ju5_A 46 DHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV-HLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTG-FPELVFI 123 (154)
T ss_dssp HCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCS-SSEEEEE
T ss_pred CCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC-cEEEEEecCccccCCChhhHhhHHHHHHHcCCCC-CCEEEEE
Confidence 3689999999 99999999999999 777666533 3899999998754 8999999998 9999999
Q ss_pred -cCCccccccCCCC--CHHHHHHHHHhhCC
Q psy12972 937 -TDGRTSFFKEPSF--SVQKMVEFFRLKLP 963 (1578)
Q Consensus 937 -~~G~~~~y~~G~~--s~~~L~~fi~~~lp 963 (1578)
++|+.+... |.. +.+.+.+++.+.+.
T Consensus 124 d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 124 DAEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp CTTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred cCCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 889888777 877 88999999987653
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=98.87 E-value=2.1e-09 Score=124.40 Aligned_cols=133 Identities=16% Similarity=0.148 Sum_probs=88.1
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||+|++|.||+|+.. ..||||+.+...... .+ .-.|.+|++
T Consensus 30 ~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~--~~---------------------------------~~~~~~E~~ 72 (289)
T 3og7_A 30 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTP--QQ---------------------------------LQAFKNEVG 72 (289)
T ss_dssp EEEEECSSEEEEEEESS--SEEEEEEESCSSCCH--HH---------------------------------HHHHHHHHH
T ss_pred eEecCCCCeEEEEEEEc--CceEEEEEeccCCCH--HH---------------------------------HHHHHHHHH
Confidence 68999999999999754 469999986542210 00 012345555
Q ss_pred HHHHHHHhhCCCCCeeecEEee-CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILW-DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~-~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++. + +.+ ..++. ......++||||++|.+|.+........++...+...+.+++ +..+|..|++|+|
T Consensus 73 ~l~~l~----h-~~i--v~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~D 145 (289)
T 3og7_A 73 VLRKTR----H-VNI--LLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRD 145 (289)
T ss_dssp HHTTCC----C-TTB--CCEEEEECSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHhCC----C-CcE--EEEEeeccCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence 554432 2 222 22222 223456899999999999876543345577777766666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 146 lkp~Nil~~~~~~~kl~Dfg~~~ 168 (289)
T 3og7_A 146 LKSNNIFLHEDNTVKIGDFGLAT 168 (289)
T ss_dssp CCGGGEEEETTTEEEECCCC---
T ss_pred CccceEEECCCCCEEEccceecc
Confidence 999999964 69999999764
|
| >1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A | Back alignment and structure |
|---|
Probab=98.87 E-value=5.3e-09 Score=105.80 Aligned_cols=87 Identities=17% Similarity=0.367 Sum_probs=77.0
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc-----------------------chhhHhHcCccc
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-----------------------EQGLARRLGVGS 928 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~-----------------------~~~L~~k~gV~~ 928 (1578)
.+++++|.||++||++|+...|.++++++.+. ++.++.|+++. +..+++.|+|.+
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 101 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQ 101 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCS
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCC
Confidence 36799999999999999999999999999987 58999999843 568999999997
Q ss_pred cCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 929 QLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 929 ~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|+++++ ++|+.. .+.|..+.++|.+++.+.+
T Consensus 102 -~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l 134 (136)
T 1zzo_A 102 -QPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALT 134 (136)
T ss_dssp -SSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC
T ss_pred -CceEEEECCCCCEE-EEecCCCHHHHHHHHHHHh
Confidence 9999999 688877 6678899999999998765
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=2.3e-09 Score=133.68 Aligned_cols=146 Identities=21% Similarity=0.172 Sum_probs=98.6
Q ss_pred ChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHH
Q psy12972 398 THSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVP 476 (1578)
Q Consensus 398 ~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 476 (1578)
.+.+-|.-. +.||.|++|.||+|+.+ +|+.||||+........ ..+.
T Consensus 23 ~~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------~~~~---------- 70 (484)
T 3nyv_A 23 IFSDRYKGQ--RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ--------------------KTDK---------- 70 (484)
T ss_dssp CHHHHEEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCB--------------------SSCH----------
T ss_pred cccCceEEe--eEEecCCCEEEEEEEECCCCCEEEEEEEEhhhccc--------------------chHH----------
Confidence 344555543 68999999999999976 89999999975431100 0010
Q ss_pred HHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HH
Q psy12972 477 LEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 477 l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~ 554 (1578)
-.+.+|++.+.++ .+...+.+-.++. .....+|||||++|.+|.+... ....++...+...+.+++ +.
T Consensus 71 ----~~~~~E~~~l~~l----~hpniv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~i~~qi~~~l~ 140 (484)
T 3nyv_A 71 ----ESLLREVQLLKQL----DHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVLSGIT 140 (484)
T ss_dssp ----HHHHHHHHHHTTC----CCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHH-TCSCCBHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHhC----CCCCCCcEEEEEE-eCCEEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHH
Confidence 1234555555444 2322233333332 2345689999999999977542 334577777666666655 78
Q ss_pred HHHHcCccccCCCCCCCCC------CeeEEecCCchh
Q psy12972 555 QIFQTGFVHADPHSGNDVN------TWLYPVDLGDKF 585 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv------~~v~liDfG~~~ 585 (1578)
.+|..|++|+|+||.|||+ +.++++|||...
T Consensus 141 ~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 141 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp HHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred HHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 8999999999999999997 258999999764
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=98.87 E-value=6.5e-09 Score=119.70 Aligned_cols=137 Identities=12% Similarity=0.048 Sum_probs=83.8
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.++....... ..+..|.
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~~~~~~ 56 (290)
T 3fme_A 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQ------------------------------------KRLLMDL 56 (290)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHH------------------------------------HHHHHHH
T ss_pred HhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHH------------------------------------HHHHHHH
Confidence 6799999999999996 48999999998754321100 0001111
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH---hhcCCCHHHHHHHHHHHH--HHHHHHc-Cc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL---LEKGFSLADVDRKLFTAF--AEQIFQT-GF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l---~~~~~~~~~v~~~l~~~~--l~~i~~~-G~ 561 (1578)
.. ....+.+...+.+-..+. .....+|||||++| ++.+.... ....++...+...+.+++ +..+|.. |+
T Consensus 57 ~~---~~~~~~h~~iv~~~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i 131 (290)
T 3fme_A 57 DI---SMRTVDCPFTVTFYGALF-REGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131 (290)
T ss_dssp HH---HHTTCCCTTBCCEEEEEE-CSSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HH---HHHhCCCCeEEEEeeeee-ccCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Confidence 11 111222222233333332 24567899999987 65554221 224577777666666655 7889998 99
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|++|.||++. .++++|||....
T Consensus 132 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T 3fme_A 132 IHRDVKPSNVLINALGQVKMCDFGISGY 159 (290)
T ss_dssp CCCCCSGGGCEECTTCCEEBCCC-----
T ss_pred ecCCCCHHHEEECCCCCEEEeecCCccc
Confidence 9999999999965 599999997643
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.87 E-value=4.2e-09 Score=122.80 Aligned_cols=141 Identities=17% Similarity=0.159 Sum_probs=88.8
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.+-|... +.||.|++|.||+|+.. +|+.||||+....-...
T Consensus 9 ~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------- 51 (320)
T 2i6l_A 9 LGSRYMDL--KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQS----------------------------------- 51 (320)
T ss_dssp ETTTEEEE--EECC-----CEEEEEETTTTEEEEEEEEECCSHHH-----------------------------------
T ss_pred cCCceeEE--EEeccCCCeEEEEEEECCCCeEEEEEEEecCChHH-----------------------------------
Confidence 33444444 68999999999999976 59999999876432110
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeC-------------CCCceEEEEeccCCCcCCchhhHhhcCCCHHHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWD-------------KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADV 544 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~-------------~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v 544 (1578)
.-.+.+|++.+.++ .+...+.+-.++.. .....+|||||++| +|.+. +....++...+
T Consensus 52 --~~~~~~e~~~l~~l----~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~--~~~~~~~~~~~ 122 (320)
T 2i6l_A 52 --VKHALREIKIIRRL----DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANV--LEQGPLLEEHA 122 (320)
T ss_dssp --HHHHHHHHHHHHTC----CCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCSE-EHHHH--HTTCCCCHHHH
T ss_pred --HHHHHHHHHHHHhc----CCCCeeEEEEeccccccccccccccccccCceeEEeeccCC-CHHHH--hhcCCccHHHH
Confidence 00134455555444 23222333333211 12345799999986 67665 34456777766
Q ss_pred HHHHHHHH--HHHHHHcCccccCCCCCCCCCC----eeEEecCCchh
Q psy12972 545 DRKLFTAF--AEQIFQTGFVHADPHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 545 ~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~----~v~liDfG~~~ 585 (1578)
...+.+++ +..+|..|++|+|++|.||++. .++++|||...
T Consensus 123 ~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~ 169 (320)
T 2i6l_A 123 RLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLAR 169 (320)
T ss_dssp HHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCB
T ss_pred HHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCcccc
Confidence 66665555 7889999999999999999973 58999999764
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=98.86 E-value=3e-09 Score=126.17 Aligned_cols=151 Identities=13% Similarity=0.046 Sum_probs=96.5
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+. +|+.||||+.+.......... .............. -.+.+|++
T Consensus 37 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~----------~~~~~~~~~~~~~~----------~~~~~E~~ 95 (348)
T 2pml_X 37 RTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDF----------TKSNNDKISIKSKY----------DDFKNELQ 95 (348)
T ss_dssp EEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEE----------CCCSSSSCCEEEHH----------HHHHHHHH
T ss_pred EEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhh----------ccccchhhhHHhHH----------HHHHHHHH
Confidence 6899999999999998 999999999875432210000 00000000000000 12456666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhh----Hh---hcCCCHHHHHHHHHHHH--HHHHHH-
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEG----LL---EKGFSLADVDRKLFTAF--AEQIFQ- 558 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~----l~---~~~~~~~~v~~~l~~~~--l~~i~~- 558 (1578)
.+.++. +..-+.+-.++.+ ...-+|||||++|.+|.++.. +. ...++...+...+.+++ +..+|.
T Consensus 96 ~l~~l~----h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 170 (348)
T 2pml_X 96 IITDIK----NEYCLTCEGIITN-YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE 170 (348)
T ss_dssp HHTTCC----CTTBCCCSEEEES-SSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCC----CCCcceEEEEEee-CCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 665552 2222333333332 345689999999999998621 11 34567776666666655 788998
Q ss_pred cCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 559 TGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
.|++|+|++|.||++. .++++|||...
T Consensus 171 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 200 (348)
T 2pml_X 171 KNICHRDVKPSNILMDKNGRVKLSDFGESE 200 (348)
T ss_dssp SCEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred CCEeecCCChHhEEEcCCCcEEEecccccc
Confidence 9999999999999964 58999999764
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=98.86 E-value=5.5e-09 Score=131.06 Aligned_cols=154 Identities=16% Similarity=0.148 Sum_probs=97.9
Q ss_pred ChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhh--HHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHH
Q psy12972 398 THSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRER--FVGDIATVQTLLRIAGFLYPKFDFQWVINELK 474 (1578)
Q Consensus 398 ~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~--~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~ 474 (1578)
.+.+-|.-. +.||.|++|.||+|+.+ +|+.||||+........ ...+ ....+...
T Consensus 33 ~i~~~Y~~~--~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~--------------------~~~~~~~~ 90 (504)
T 3q5i_A 33 KIGESYFKV--RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDD--------------------NKNIEKFH 90 (504)
T ss_dssp CGGGTEEEE--EEEEC--CEEEEEEEETTTCCEEEEEEEEC------------------------------------CTH
T ss_pred CcccceEEE--eEecccCCeEEEEEEECCCCcEEEEEEEEhhhccccccccc--------------------chhhHHHH
Confidence 345555554 78999999999999975 78999999986542110 0000 00000111
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--
Q psy12972 475 VPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 475 ~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~-- 552 (1578)
-.+.+|++.+.++ .+...+.+-.++. .....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 91 ------~~~~~E~~~l~~l----~hpniv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~i~~qi~~~ 158 (504)
T 3q5i_A 91 ------EEIYNEISLLKSL----DHPNIIKLFDVFE-DKKYFYLVTEFYEGGELFEQII-NRHKFDECDAANIMKQILSG 158 (504)
T ss_dssp ------HHHHHHHHHHHTC----CCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHH-HHSCCCHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHhC----CCCCCCeEEEEEE-cCCEEEEEEecCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 1245566666554 2333233333332 2345689999999999977643 345677777777666665
Q ss_pred HHHHHHcCccccCCCCCCCCCC------eeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~------~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.|||+. .++++|||...
T Consensus 159 l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 197 (504)
T 3q5i_A 159 ICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS 197 (504)
T ss_dssp HHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCE
T ss_pred HHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCE
Confidence 7889999999999999999964 48999999764
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=98.86 E-value=3.6e-09 Score=124.90 Aligned_cols=136 Identities=15% Similarity=0.078 Sum_probs=90.4
Q ss_pred cccccccceEEEEEEec-CCCE----EEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVE----VAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~----VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|.||+|+.. +|+. ||||+.+...... ..-.|
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~ 64 (327)
T 3poz_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK------------------------------------ANKEI 64 (327)
T ss_dssp EEEEEETTEEEEEEEECC----CCEEEEEEEC-------------------------------------------CHHHH
T ss_pred eEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHH------------------------------------HHHHH
Confidence 68999999999999954 6665 4666654321110 01134
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
.+|++.+.++. +...+.+-.++. .....++|||++|.++.+...-....++...+...+.+++ +..+|..|+
T Consensus 65 ~~E~~~l~~l~----h~~iv~~~~~~~--~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i 138 (327)
T 3poz_A 65 LDEAYVMASVD----NPHVCRLLGICL--TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 138 (327)
T ss_dssp HHHHHHHHHCC----BTTBCCEEEEEE--SSSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCC----CCCEeEEEEEEe--cCCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence 66777776653 222233333332 3456799999999999887543345577777766666665 888999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|+||.|||+. .++++|||....
T Consensus 139 vH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 139 VHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp CCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred eCCCCChheEEECCCCCEEEccCcceeE
Confidence 9999999999964 599999997643
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=2e-09 Score=127.22 Aligned_cols=137 Identities=13% Similarity=0.155 Sum_probs=91.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+...... ... -.+.+|+
T Consensus 40 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------~~~------~~~~~E~ 84 (329)
T 3gbz_A 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEE-----------------------------GVP------GTAIREV 84 (329)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECCCCC-------------------------------------------CHHHH
T ss_pred EEEEecCCeEEEEEEECCCCceEEEEEEccccccc-----------------------------ccc------hhHHHHH
Confidence 68999999999999854 89999999986542211 000 0123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+-.++. ....-+|||||++| .|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 85 ~~l~~l----~h~~iv~~~~~~~-~~~~~~lv~e~~~~-~L~~~~~-~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~D 157 (329)
T 3gbz_A 85 SLLKEL----QHRNIIELKSVIH-HNHRLHLIFEYAEN-DLKKYMD-KNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRD 157 (329)
T ss_dssp HHGGGC----CCTTBCCEEEEEE-ETTEEEEEEECCSE-EHHHHHH-HCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHHc----CCCCcceEEEEEe-cCCEEEEEEecCCC-CHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCC
Confidence 554443 2333333333332 23456899999987 6665532 233577776666666655 7889999999999
Q ss_pred CCCCCCCCC--------eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT--------WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~--------~v~liDfG~~~~l 587 (1578)
++|.|||+. .++++|||....+
T Consensus 158 lkp~NIll~~~~~~~~~~~kl~Dfg~a~~~ 187 (329)
T 3gbz_A 158 LKPQNLLLSVSDASETPVLKIGDFGLARAF 187 (329)
T ss_dssp CCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred CCHHHEEEecCCCCccceEEECcCCCcccc
Confidence 999999973 3899999976443
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=5.5e-09 Score=119.71 Aligned_cols=138 Identities=13% Similarity=0.033 Sum_probs=94.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+........ + ..-.+.+|+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------~------~~~~~~~e~ 56 (279)
T 2w5a_A 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-----------------------------A------EKQMLVSEV 56 (279)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCH-----------------------------H------HHHHHHHHH
T ss_pred hhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCH-----------------------------H------HHHHHHHHH
Confidence 68999999999999975 79999999986542110 0 001245566
Q ss_pred HHHHHHHHhhCCCCCeeecEEee-CCCCceEEEEeccCCCcCCchhhHhh---cCCCHHHHHHHHHHHH--HHHHHHcC-
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW-DKSSTRVLTTEFIDGVKISDKEGLLE---KGFSLADVDRKLFTAF--AEQIFQTG- 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~-~~~t~~VLVME~i~G~~l~d~~~l~~---~~~~~~~v~~~l~~~~--l~~i~~~G- 560 (1578)
+.+.++. +..-+.+-..+. +-...-+|||||++|.+|.++..... ..++...+...+.++. +..+|..|
T Consensus 57 ~~l~~l~----h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ 132 (279)
T 2w5a_A 57 NLLRELK----HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132 (279)
T ss_dssp HHHHHCC----CTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHhcC----CCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccC
Confidence 6666553 222233222222 12234579999999999988754221 2377777777666665 78899999
Q ss_pred ----ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 ----FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ----~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.||++. .++++|||...
T Consensus 133 ~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp -----CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred CCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999965 59999999764
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=98.84 E-value=7.3e-09 Score=119.61 Aligned_cols=136 Identities=17% Similarity=0.070 Sum_probs=91.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+........ .+ .-.+.+|+
T Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~--~~---------------------------------~~~~~~e~ 76 (290)
T 1t4h_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK--SE---------------------------------RQRFKEEA 76 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--HH---------------------------------HHHHHHHH
T ss_pred eeccCCCCeEEEEeEecCCceEEEEEEecchhhCH--HH---------------------------------HHHHHHHH
Confidence 46999999999999864 78999999986432110 00 01234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC---CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC--
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK---SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG-- 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~---~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G-- 560 (1578)
+.+.++ .+...+.+-.++... ...-+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|
T Consensus 77 ~~l~~l----~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~ 151 (290)
T 1t4h_A 77 EMLKGL----QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK-RFKVMKIKVLRSWCRQILKGLQFLHTRTPP 151 (290)
T ss_dssp HHHTTC----CCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred HHHHhC----CCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHH-HccCCCHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 555444 222223332332221 122479999999999988753 234567766666665555 78899999
Q ss_pred ccccCCCCCCCCCC----eeEEecCCch
Q psy12972 561 FVHADPHSGNDVNT----WLYPVDLGDK 584 (1578)
Q Consensus 561 ~vH~DpHPGNilv~----~v~liDfG~~ 584 (1578)
++|+|++|.|||+. .++++|||..
T Consensus 152 i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 152 IIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp CCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 99999999999974 5999999976
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=8e-09 Score=120.75 Aligned_cols=137 Identities=14% Similarity=0.115 Sum_probs=94.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+|+.||||+........- ..-.+.+|++
T Consensus 34 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~~E~~ 78 (313)
T 3cek_A 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQ-----------------------------------TLDSYRNEIA 78 (313)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHH-----------------------------------HHHHHHHHHH
T ss_pred EEecCCCCEEEEEEEcCCCcEEEEEEecccccccc-----------------------------------chHHHHHHHH
Confidence 68999999999999998999999999865321100 0013466777
Q ss_pred HHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++... .+. +.+-... .....-+|||| ..|.+|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 79 ~l~~l~~~---~~~iv~~~~~~-~~~~~~~lv~e-~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~d 152 (313)
T 3cek_A 79 YLNKLQQH---SDKIIRLYDYE-ITDQYIYMVME-CGNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSD 152 (313)
T ss_dssp HHHHHGGG---CTTBCCEEEEE-ECSSEEEEEEC-CCSEEHHHHHH-HCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHhcccc---CCceEEEEEEe-ecCCEEEEEEe-cCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence 77777642 222 2222222 22344689999 55778877643 234567666666555555 7889999999999
Q ss_pred CCCCCCCCC--eeEEecCCchhh
Q psy12972 566 PHSGNDVNT--WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~--~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 153 lkp~NIl~~~~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 153 LKPANFLIVDGMLKLIDFGIANQ 175 (313)
T ss_dssp CCGGGEEEETTEEEECCCSSSCC
T ss_pred CCcccEEEECCeEEEeecccccc
Confidence 999999964 589999997643
|
| >1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A | Back alignment and structure |
|---|
Probab=98.84 E-value=8.7e-10 Score=117.44 Aligned_cols=89 Identities=19% Similarity=0.363 Sum_probs=74.4
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchh-hHhHcCc--cccCCcEEEE-cCCccccccCC
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQG-LARRLGV--GSQLPQIALL-TDGRTSFFKEP 947 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~-L~~k~gV--~~~~PTl~lf-~~G~~~~y~~G 947 (1578)
.+++++|.|||+||++|+.+.|.++++++.... ++.|+.||++.+.+ ++..|++ .+ +||+++| ++|+.+....|
T Consensus 45 ~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d~~~~~~~~~~~~~~~~-~Pt~~~~d~~G~~~~~~~G 122 (164)
T 1sen_A 45 SGLPLMVIIHKSWCGACKALKPKFAESTEISEL-SHNFVMVNLEDEEEPKDEDFSPDGGY-IPRILFLDPSGKVHPEIIN 122 (164)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEEGGGSCSCGGGCTTCSC-SSEEEEECTTSCBCTTCCC
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEecCCchHHHHHhcccCCc-CCeEEEECCCCCEEEEEeC
Confidence 478999999999999999999999998766543 37788899988877 8999988 65 9999999 88987765556
Q ss_pred C----------CCHHHHHHHHHhhC
Q psy12972 948 S----------FSVQKMVEFFRLKL 962 (1578)
Q Consensus 948 ~----------~s~~~L~~fi~~~l 962 (1578)
. .+.++|.+++++.+
T Consensus 123 ~~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 123 ENGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp TTSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred CCCccchhcccCCHHHHHHHHHHHH
Confidence 3 78889999998765
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.83 E-value=2.8e-09 Score=124.45 Aligned_cols=144 Identities=14% Similarity=0.071 Sum_probs=96.3
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.+..-.... ..+.....+.+|.
T Consensus 37 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-------------------------------~~~~~~~~~~~e~ 85 (312)
T 2iwi_A 37 PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGW-------------------------------SPLSDSVTCPLEV 85 (312)
T ss_dssp EEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC---------------------------------------CCCCHHH
T ss_pred eEEEcCCCEEEEEEEEccCCeEEEEEEEeccccccc-------------------------------ccchhhHHHHHHH
Confidence 6899999999999986 4799999999865422110 0011223346677
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEec-cCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEF-IDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~-i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++.....+...+.+-.++. .....++|||| ++|.+|.++.. ....++...+...+.+++ +..+|..|++|+
T Consensus 86 ~~l~~l~~~~~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~ 163 (312)
T 2iwi_A 86 ALLWKVGAGGGHPGVIRLLDWFE-TQEGFMLVLERPLPAQDLFDYIT-EKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHR 163 (312)
T ss_dssp HHHHHHHSSCCCSSBCCEEEEC------CEEEEECCSSEEEHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHHTEECC
T ss_pred HHHHhhcccCCCCCeeeEEEEEe-cCCeEEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 77777754333333233333321 23456899999 79999988743 234577777766666655 788999999999
Q ss_pred CCCCCCCCCC----eeEEecCCchh
Q psy12972 565 DPHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~----~v~liDfG~~~ 585 (1578)
|++|.||+++ .++++|||...
T Consensus 164 dlkp~Nil~~~~~~~~kl~dfg~~~ 188 (312)
T 2iwi_A 164 DIKDENILIDLRRGCAKLIDFGSGA 188 (312)
T ss_dssp CCSGGGEEEETTTTEEEECCCSSCE
T ss_pred CCChhhEEEeCCCCeEEEEEcchhh
Confidence 9999999974 48999999753
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.83 E-value=2.3e-09 Score=127.47 Aligned_cols=146 Identities=18% Similarity=0.229 Sum_probs=88.8
Q ss_pred cccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||+|++|.||+|+.. +++.||||+....-.. ...++..++.+. .-++.
T Consensus 43 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~e~~~~~~~~-------------------------~~~~~ 96 (345)
T 2v62_A 43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGP-LFSELKFYQRVA-------------------------KKDCI 96 (345)
T ss_dssp EEC------CEEEEEESSSCGGGCCEEEEEEECC-CH-HHHHHHHHHHHC-------------------------CHHHH
T ss_pred eeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcc-hHHHHHHHHHHh-------------------------hhHHH
Confidence 68999999999999975 6899999998765321 122222211110 01233
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeC-C--CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWD-K--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~-~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
.|...+..+ .+...+.+-..+.. . ....+|||||+ |.+|.++..- ...++...+...+.+++ +..+|..
T Consensus 97 ~e~~~~~~l----~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~ 170 (345)
T 2v62_A 97 KKWIERKQL----DYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQ-NGTFKKSTVLQLGIRMLDVLEYIHEN 170 (345)
T ss_dssp HHHHHHHTC----SCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBG-GGBCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhccc----cccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 444443332 22222222222211 1 23458999999 9999887442 22677777777776666 7889999
Q ss_pred CccccCCCCCCCCCC-----eeEEecCCchhh
Q psy12972 560 GFVHADPHSGNDVNT-----WLYPVDLGDKFR 586 (1578)
Q Consensus 560 G~vH~DpHPGNilv~-----~v~liDfG~~~~ 586 (1578)
|++|+|++|.|||+. .++++|||....
T Consensus 171 ~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~ 202 (345)
T 2v62_A 171 EYVHGDIKAANLLLGYKNPDQVYLADYGLSYR 202 (345)
T ss_dssp TEECSCCSGGGEEEESSSTTSEEECCCTTCEE
T ss_pred CeeCCCcCHHHEEEccCCCCcEEEEeCCCcee
Confidence 999999999999963 699999997643
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=6e-09 Score=125.83 Aligned_cols=138 Identities=20% Similarity=0.093 Sum_probs=88.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+..-.. . -.+..|+
T Consensus 60 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------------------------------~------~~~~~e~ 101 (382)
T 2vx3_A 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAF--------------------------------L------NQAQIEV 101 (382)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSSHHH--------------------------------H------HHHHHHH
T ss_pred EEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHH--------------------------------H------HHHHHHH
Confidence 68999999999999965 7899999998642110 0 0123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHH--HcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIF--QTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~--~~G 560 (1578)
+.++.+... .......+..++.. .....+|||||++| .|.++..-.. .+++...+...+.+++ +..+| ..|
T Consensus 102 ~~l~~l~~~-~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ 179 (382)
T 2vx3_A 102 RLLELMNKH-DTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS 179 (382)
T ss_dssp HHHHHHHHC-SSGGGGGBCCEEEEEEETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC
T ss_pred HHHHHHHhc-ccccceeEEEeeeeeccCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC
Confidence 555555421 11111123333221 23456799999987 7776543222 3577766666555555 56666 579
Q ss_pred ccccCCCCCCCCCC-----eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT-----WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~-----~v~liDfG~~~~ 586 (1578)
++|+|+||.|||+. .++++|||....
T Consensus 180 ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~ 210 (382)
T 2vx3_A 180 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQ 210 (382)
T ss_dssp EECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence 99999999999973 389999997643
|
| >3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0 | Back alignment and structure |
|---|
Probab=98.83 E-value=8.5e-09 Score=108.51 Aligned_cols=91 Identities=15% Similarity=0.318 Sum_probs=81.6
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHc---------------------------
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRL--------------------------- 924 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~--------------------------- 924 (1578)
..++++|.||++||++|+...|.+.++++.+.+.++.++.|+++.+.+.+++|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 35799999999999999999999999999999878999999999887777777
Q ss_pred CccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 925 GVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 925 gV~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+|.+ +|+++++ ++|+....+.|..+.+++.+++++.+.
T Consensus 113 ~i~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 151 (165)
T 3or5_A 113 GITG-IPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALG 151 (165)
T ss_dssp CSCS-SSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC
T ss_pred CCCC-CCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 8997 9999888 789888777798999999999988764
|
| >2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A | Back alignment and structure |
|---|
Probab=98.82 E-value=7.5e-09 Score=107.58 Aligned_cols=91 Identities=18% Similarity=0.388 Sum_probs=80.8
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc----------------------chhhHhHcCccccC
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------EQGLARRLGVGSQL 930 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~----------------------~~~L~~k~gV~~~~ 930 (1578)
.++++|.||++||++|+...|.+.++++.+.+.++.+..|+++. +..+++.|+|.+ +
T Consensus 26 gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-~ 104 (151)
T 2f9s_A 26 GKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSP-L 104 (151)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCS-S
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCC-C
Confidence 67899999999999999999999999999987669999999865 357999999997 9
Q ss_pred CcEEEE-cCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 931 PQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 931 PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
|+++++ ++|+....+.|..+.++|.+++.+.+..
T Consensus 105 P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~ 139 (151)
T 2f9s_A 105 PTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPG 139 (151)
T ss_dssp CEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred CeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhh
Confidence 999988 7898877667888999999999988754
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=1.8e-09 Score=124.99 Aligned_cols=136 Identities=18% Similarity=0.163 Sum_probs=82.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||+|++|.||+|+.. +|+.||||+........ . .-++.+|+
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~---------------------------------~~~~~~e~ 64 (303)
T 2vwi_A 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT---S---------------------------------MDELLKEI 64 (303)
T ss_dssp EECC---CCCEEEEEC----CEEEEECCC---------------------------------------------------
T ss_pred heeccccceEEEEEEECCCCcEEEEEEEEhhhcch---h---------------------------------HHHHHHHH
Confidence 68999999999999864 79999999875431110 0 00123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-------hcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-------EKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-------~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
+.+.++ .+...+.+-.++ ......++||||++|.+|.++.... ...++...+...+.+++ +..+|.
T Consensus 65 ~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 139 (303)
T 2vwi_A 65 QAMSQC----HHPNIVSYYTSF-VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 139 (303)
T ss_dssp -CCCCC----CCTTBCCEEEEE-ESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhc----CCCCEeeEEEEE-eecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 333332 222222322332 2234578999999999998875421 23367666666666655 788999
Q ss_pred cCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 559 TGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
.|++|+|++|.||++. .++++|||...
T Consensus 140 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 140 NGQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp TTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred CCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 9999999999999964 58999999764
|
| >2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A | Back alignment and structure |
|---|
Probab=98.82 E-value=6.6e-09 Score=106.89 Aligned_cols=90 Identities=18% Similarity=0.333 Sum_probs=79.2
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEEC---------------------------ccchhhHhHc
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV---------------------------HNEQGLARRL 924 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc---------------------------~~~~~L~~k~ 924 (1578)
.+++++|.||++||++|+...|.+.++++.+.+. +.+..|++ +.+..+++.|
T Consensus 28 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 106 (148)
T 2b5x_A 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAF 106 (148)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHT
T ss_pred CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHh
Confidence 3689999999999999999999999999999876 99999995 4456899999
Q ss_pred CccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 925 GVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 925 gV~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+|.+ +|+++++ ++|+....+.|..+.++|.+++.+.+.
T Consensus 107 ~v~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 107 ENEY-VPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp CCCC-SSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHT
T ss_pred CCCC-CCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHh
Confidence 9998 9999999 789887766788889999999987654
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=98.81 E-value=4e-09 Score=127.43 Aligned_cols=70 Identities=14% Similarity=0.208 Sum_probs=52.0
Q ss_pred eEEEEeccCCCcCCchhh-H--hhcCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC----eeEEecCCchhh
Q psy12972 516 RVLTTEFIDGVKISDKEG-L--LEKGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT----WLYPVDLGDKFR 586 (1578)
Q Consensus 516 ~VLVME~i~G~~l~d~~~-l--~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~----~v~liDfG~~~~ 586 (1578)
-+|||||++| .|.+... . ....++...+...+.+++ +..+|..|++|+|+||.|||+. .++++|||....
T Consensus 113 ~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~ 191 (383)
T 3eb0_A 113 LNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKK 191 (383)
T ss_dssp EEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcc
Confidence 4699999987 5554422 1 224566666666665655 7889999999999999999973 499999997643
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=4.8e-09 Score=123.59 Aligned_cols=136 Identities=18% Similarity=0.135 Sum_probs=91.5
Q ss_pred cccccccceEEEEEEec-CCCEE--EEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEV--AVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~V--AVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
+.||.|++|.||+|+.. +|+.| |||+........ ..-.+.+
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~------------------------------------~~~~~~~ 74 (327)
T 1fvr_A 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD------------------------------------DHRDFAG 74 (327)
T ss_dssp EEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------------------------------------------CHHHH
T ss_pred eeeecCCCceEEEEEEccCCcccceeeeeeccccchH------------------------------------HHHHHHH
Confidence 68999999999999965 67755 888876432110 0012345
Q ss_pred HHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------cCCCHHHHHHHHH
Q psy12972 486 EGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------------KGFSLADVDRKLF 549 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------------~~~~~~~v~~~l~ 549 (1578)
|++.+.++. +++. +.+-.++ .....-+|||||++|.+|.++..-.. ..++...+...+.
T Consensus 75 E~~~l~~l~----~hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 149 (327)
T 1fvr_A 75 ELEVLCKLG----HHPNIINLLGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149 (327)
T ss_dssp HHHHHTTCC----CCTTBCCEEEEE-EETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHH
T ss_pred HHHHHHhcc----CCCchhhhceee-eeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHH
Confidence 555554441 2332 2222232 22345689999999999988743211 2467777777666
Q ss_pred HHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 550 TAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 550 ~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+++ +..+|..|++|+|++|.|||+. .++++|||...
T Consensus 150 qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~ 190 (327)
T 1fvr_A 150 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 190 (327)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEE
T ss_pred HHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCc
Confidence 665 7889999999999999999975 58999999763
|
| >2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.81 E-value=1.5e-08 Score=105.09 Aligned_cols=91 Identities=20% Similarity=0.304 Sum_probs=80.8
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccch-----------------------hhHhHcCcccc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQ-----------------------GLARRLGVGSQ 929 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~-----------------------~L~~k~gV~~~ 929 (1578)
+++++|.||++||++|+...|.++++++.+.+.++.+..|+++.+. ++++.|+|.+
T Consensus 30 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~- 108 (152)
T 2lja_A 30 GKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING- 108 (152)
T ss_dssp TSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS-
T ss_pred CCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC-
Confidence 6789999999999999999999999999998777999999998764 7899999997
Q ss_pred CCcEEEEc-CCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 930 LPQIALLT-DGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 930 ~PTl~lf~-~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+|+++++. +|+....+.|..+.++|.+++.+....
T Consensus 109 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~ 144 (152)
T 2lja_A 109 IPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGL 144 (152)
T ss_dssp SCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTC
T ss_pred CCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhcc
Confidence 99999995 888877777888889999999877643
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=98.81 E-value=7.1e-09 Score=124.02 Aligned_cols=138 Identities=16% Similarity=0.125 Sum_probs=89.9
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.+.+.... . .+.+|+
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--------------------------------~------~~~~e~ 66 (373)
T 1q8y_A 25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT--------------------------------E------AAEDEI 66 (373)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHH--------------------------------H------HHHHHH
T ss_pred EeeeecCCeEEEEEEecCCCcEEEEEEecCCccch--------------------------------h------hhhHHH
Confidence 6799999999999996 589999999987432100 0 123344
Q ss_pred HHHHHHHHhh-------CCCCCeeecEEeeCC---CCceEEEEeccCCCcCCchhhH-hhcCCCHHHHHHHHHHHH--HH
Q psy12972 488 RNAERCSKDL-------AHLPYVYIPRILWDK---SSTRVLTTEFIDGVKISDKEGL-LEKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 488 ~n~~r~~~~~-------~~~~~v~vP~v~~~~---~t~~VLVME~i~G~~l~d~~~l-~~~~~~~~~v~~~l~~~~--l~ 554 (1578)
+.++++.+.- .+...+.+-..+... ...-+|||||+ |.+|.++..- ...+++...+...+.+++ +.
T Consensus 67 ~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~ 145 (373)
T 1q8y_A 67 KLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLD 145 (373)
T ss_dssp HHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHH
Confidence 4444443210 011112222222111 11457999999 8888876432 234577777777666665 78
Q ss_pred HHHHc-CccccCCCCCCCCCC---------eeEEecCCchh
Q psy12972 555 QIFQT-GFVHADPHSGNDVNT---------WLYPVDLGDKF 585 (1578)
Q Consensus 555 ~i~~~-G~vH~DpHPGNilv~---------~v~liDfG~~~ 585 (1578)
.+|.. |++|+|++|.|||+. .++++|||...
T Consensus 146 ~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~ 186 (373)
T 1q8y_A 146 YMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC 186 (373)
T ss_dssp HHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCE
T ss_pred HHHhcCCEEecCCChHHeEEeccCCCcCcceEEEccccccc
Confidence 89998 999999999999973 58999999763
|
| >3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B} | Back alignment and structure |
|---|
Probab=98.81 E-value=7.7e-09 Score=107.69 Aligned_cols=90 Identities=13% Similarity=0.285 Sum_probs=78.9
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc------------------------chhhHhHcC--c
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN------------------------EQGLARRLG--V 926 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~------------------------~~~L~~k~g--V 926 (1578)
.++++|.||++||++|+...|.+.++++.+++.++.+..|+++. ...+++.|+ +
T Consensus 24 gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 103 (151)
T 3raz_A 24 APVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNTV 103 (151)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCCS
T ss_pred CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCcc
Confidence 67999999999999999999999999999987779999999863 345788899 9
Q ss_pred cccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 927 GSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 927 ~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
.+ +|+++++ ++|+....+.|..+.++|.+++++...
T Consensus 104 ~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~ 140 (151)
T 3raz_A 104 GV-LPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHS 140 (151)
T ss_dssp CC-SSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHT
T ss_pred CC-CCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 87 9998888 789888777899999999999987653
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.81 E-value=6.4e-09 Score=120.03 Aligned_cols=135 Identities=13% Similarity=-0.008 Sum_probs=89.6
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
..||.|++|+||+|+. .+|+.||||+....-... . -.+.+|+
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-------------------------------~------~~~~~e~ 70 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRY-------------------------------S------QPLHEEI 70 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC----------------------------------------HHHHHHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHH-------------------------------H------HHHHHHH
Confidence 4799999999999995 479999999876431100 0 1234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhc--CCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEK--GFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~--~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+.++ .+..-+.+-..+. .....+|||||++|.+|.++...... ..+...+...+.+++ +..+|..|++|
T Consensus 71 ~~l~~l----~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 145 (295)
T 2clq_A 71 ALHKHL----KHKNIVQYLGSFS-ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145 (295)
T ss_dssp HHHHTC----CCTTBCCEEEEEE-ETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHhC----CCCCEeeEeeEEE-eCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEc
Confidence 555443 2322233333332 23456899999999999887542211 234455544444444 78899999999
Q ss_pred cCCCCCCCCCC----eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~----~v~liDfG~~~ 585 (1578)
+|++|.||++. .++++|||...
T Consensus 146 ~dl~p~Nil~~~~~~~~kl~Dfg~~~ 171 (295)
T 2clq_A 146 RDIKGDNVLINTYSGVLKISDFGTSK 171 (295)
T ss_dssp CCCSGGGEEEETTTCCEEECCTTTCE
T ss_pred cCCChhhEEEECCCCCEEEeeccccc
Confidence 99999999963 58999999764
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.80 E-value=4.6e-09 Score=124.69 Aligned_cols=148 Identities=14% Similarity=0.078 Sum_probs=94.2
Q ss_pred hhccccCCcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHH
Q psy12972 401 QLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQ 479 (1578)
Q Consensus 401 ~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 479 (1578)
+-|... +.||.|++|.||+|+. .+|+.||||+.+......- .+... -.
T Consensus 24 ~~y~~~--~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~--------------~~~~~-~~-------------- 72 (335)
T 3dls_A 24 QKYSTM--SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLED--------------CWIED-PK-------------- 72 (335)
T ss_dssp HHEEEE--EECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTT--------------SEEEE-TT--------------
T ss_pred cceEEE--eEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccc--------------cccch-HH--------------
Confidence 334444 6899999999999995 4899999999876421100 00000 00
Q ss_pred HHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCC-CcCCchhhHhhcCCCHHHHHHHHHHHH--HHHH
Q psy12972 480 ELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDG-VKISDKEGLLEKGFSLADVDRKLFTAF--AEQI 556 (1578)
Q Consensus 480 ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G-~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i 556 (1578)
.-.+.+|++.+.++. +...+.+-.++ ......+|||||+.+ ..+.++.. ....++...+...+.+++ +..+
T Consensus 73 ~~~~~~E~~~l~~l~----h~~Iv~~~~~~-~~~~~~~lv~e~~~~g~~l~~~~~-~~~~l~~~~~~~i~~qi~~~L~~L 146 (335)
T 3dls_A 73 LGKVTLEIAILSRVE----HANIIKVLDIF-ENQGFFQLVMEKHGSGLDLFAFID-RHPRLDEPLASYIFRQLVSAVGYL 146 (335)
T ss_dssp TEEEEHHHHHHTTCC----CTTBCCEEEEE-ECSSEEEEEEECCTTSCBHHHHHH-TCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC----CCCEeeEEEEE-eeCCEEEEEEEeCCCCccHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHH
Confidence 002244555554442 22223332333 233456799999854 47766532 223577777666666655 7889
Q ss_pred HHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 557 FQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 557 ~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|..|++|+|++|.|||+. .++++|||...
T Consensus 147 H~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 178 (335)
T 3dls_A 147 RLKDIIHRDIKDENIVIAEDFTIKLIDFGSAA 178 (335)
T ss_dssp HHTTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred HhCCeEEeccCHHHEEEcCCCcEEEeecccce
Confidence 999999999999999965 59999999763
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.78 E-value=1.7e-08 Score=118.52 Aligned_cols=136 Identities=18% Similarity=0.175 Sum_probs=90.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+.-... .-.+.+|+
T Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------------------------------------~~~~~~e~ 76 (337)
T 3ll6_A 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEK-------------------------------------NRAIIQEV 76 (337)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHH-------------------------------------HHHHHHHH
T ss_pred EEEccCCceEEEEEEECCCCcEEEEEEecCCchHH-------------------------------------HHHHHHHH
Confidence 68999999999999964 89999999875442110 01234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEee-------CCCCceEEEEeccCCCcCCchhh-Hh-hcCCCHHHHHHHHHHHH--HHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW-------DKSSTRVLTTEFIDGVKISDKEG-LL-EKGFSLADVDRKLFTAF--AEQI 556 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~-------~~~t~~VLVME~i~G~~l~d~~~-l~-~~~~~~~~v~~~l~~~~--l~~i 556 (1578)
+.+.++.. +...+.+-..+. .....-+++|||++| +|.+... .. ...++...+...+.+++ +..+
T Consensus 77 ~~l~~l~~---h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g-~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~L 152 (337)
T 3ll6_A 77 CFMKKLSG---HPNIVQFCSAASIGKEESDTGQAEFLLLTELCKG-QLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152 (337)
T ss_dssp HHHHHHTT---STTBCCEEEEEEECTTTSTTSSEEEEEEEECCSE-EHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcc---CCChhhccccccccccccccCCceEEEEEEecCC-CHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 66666541 222233322221 112234799999986 5555432 12 23477777777666666 8889
Q ss_pred HHcC--ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 557 FQTG--FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 557 ~~~G--~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|..| ++|+|++|.|||+. .++++|||...
T Consensus 153 H~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 186 (337)
T 3ll6_A 153 HRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186 (337)
T ss_dssp HTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred HhCCCCEEEccCCcccEEECCCCCEEEecCccce
Confidence 9999 99999999999965 58999999753
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=8.9e-09 Score=126.73 Aligned_cols=128 Identities=20% Similarity=0.150 Sum_probs=81.8
Q ss_pred CcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 408 ENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
.+.||.|++|.||.+...+|+.||||+..+...+. +.+|+
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~----------------------------------------~~~E~ 59 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDI----------------------------------------ALMEI 59 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHH----------------------------------------HHHHH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHH----------------------------------------HHHHH
Confidence 47899999999987777799999999886532111 13444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHhhcCCCH-----------HHHHHHHHHHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLLEKGFSL-----------ADVDRKLFTAFAE 554 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~~~~~~~-----------~~v~~~l~~~~l~ 554 (1578)
+.+.++. +++.| .+++.. ....-+|||||++| +|.++.. ..+... ..++..++.+ +.
T Consensus 60 ~~l~~l~----~HpnI--v~~~~~~~~~~~~~lv~E~~~g-sL~~~l~--~~~~~~~~~~~~~~~~~~~i~~qi~~a-L~ 129 (434)
T 2rio_A 60 KLLTESD----DHPNV--IRYYCSETTDRFLYIALELCNL-NLQDLVE--SKNVSDENLKLQKEYNPISLLRQIASG-VA 129 (434)
T ss_dssp HHHHHHT----TSTTB--CCEEEEEECSSEEEEEECCCSE-EHHHHHH--TC------------CCHHHHHHHHHHH-HH
T ss_pred HHHHhcc----CCCCc--CeEEEEEecCCeEEEEEecCCC-CHHHHHh--ccCCCchhhhhccchhHHHHHHHHHHH-HH
Confidence 4444432 23332 222322 22345799999976 7877643 222111 1233333332 77
Q ss_pred HHHHcCccccCCCCCCCCCC----------------eeEEecCCchh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT----------------WLYPVDLGDKF 585 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~----------------~v~liDfG~~~ 585 (1578)
.+|..|++|+|++|.|||+. .++++|||...
T Consensus 130 ~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~ 176 (434)
T 2rio_A 130 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176 (434)
T ss_dssp HHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCE
T ss_pred HHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccce
Confidence 89999999999999999973 47888888653
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.77 E-value=7.6e-09 Score=122.23 Aligned_cols=136 Identities=15% Similarity=0.077 Sum_probs=91.0
Q ss_pred cccccccceEEEEEEec-CCCEE----EEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEV----AVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~V----AVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|.||+|+.. +|+.| |+|..+...... . .-.+
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~----------------------~--------------~~~~ 64 (327)
T 3lzb_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK----------------------A--------------NKEI 64 (327)
T ss_dssp EEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCC----------------------C--------------HHHH
T ss_pred EEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHH----------------------H--------------HHHH
Confidence 68999999999999954 67665 555554322110 0 0123
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
.+|++.+.++. +...+.+-.++. .....++|||++|.++.+...-....++...+...+.+++ +..+|..|+
T Consensus 65 ~~E~~~l~~l~----hp~iv~~~~~~~--~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 138 (327)
T 3lzb_A 65 LDEAYVMASVD----NPHVCRLLGICL--TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 138 (327)
T ss_dssp HHHHHHHTTCC----BTTBCCCCEEEE--SSSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCC----CCCeeEEEEEEe--cCCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 45555554442 222233333332 3456799999999999887544445677777777666666 888999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|+||.|||+. .++++|||....
T Consensus 139 vH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 139 VHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp CCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred cCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 9999999999974 699999998744
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=1.8e-08 Score=130.44 Aligned_cols=135 Identities=15% Similarity=0.101 Sum_probs=95.0
Q ss_pred cccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+.. .+..||||+.+....... .-.|.
T Consensus 396 ~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~ 439 (656)
T 2j0j_A 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV------------------------------------REKFL 439 (656)
T ss_dssp EEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHH------------------------------------HHHHH
T ss_pred eEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHH------------------------------------HHHHH
Confidence 57999999999999875 356799998764322110 11345
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|+..+.++. +..-+.+-.++. .+..+|||||++|.+|.++.......++...+...+.+++ +..+|..|++
T Consensus 440 ~E~~~l~~l~----HpnIv~l~~~~~--~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~giv 513 (656)
T 2j0j_A 440 QEALTMRQFD----HPHIVKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFV 513 (656)
T ss_dssp HHHHHHHHCC----CTTBCCEEEEEC--SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCC----CCCCCeEEEEEe--cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 6666666552 333233333332 2456899999999999887543334577776666655555 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.|||+. .++++|||...
T Consensus 514 HrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 514 HRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp CSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred ccccchHhEEEeCCCCEEEEecCCCe
Confidence 999999999964 59999999764
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.76 E-value=8.2e-09 Score=116.73 Aligned_cols=88 Identities=15% Similarity=0.056 Sum_probs=63.5
Q ss_pred CChhhhccccCCcccc-cccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHH
Q psy12972 397 CTHSQLFRSFDENPIA-AASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKV 475 (1578)
Q Consensus 397 ~~~~~iF~~fd~~Pla-saSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 475 (1578)
..+.+.+...+-+|++ .|+.++||+....+|+.++||+.++...
T Consensus 13 ~~l~~~~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~~----------------------------------- 57 (264)
T 1nd4_A 13 AAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGAL----------------------------------- 57 (264)
T ss_dssp GGGTTTTTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTT-----------------------------------
T ss_pred HHHHHhcCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcccc-----------------------------------
Confidence 3345555666667887 6677999999888899999999765310
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCC--CceEEEEeccCCCcCC
Q psy12972 476 PLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKS--STRVLTTEFIDGVKIS 529 (1578)
Q Consensus 476 ~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~--t~~VLVME~i~G~~l~ 529 (1578)
-++..|++.++.++.. .+.||+++.... +..+++|||++|.++.
T Consensus 58 -----~~~~~E~~~l~~l~~~-----~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 58 -----NELQDEAARLSWLATT-----GVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 103 (264)
T ss_dssp -----SCHHHHHHHHHHHHTT-----TCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred -----hhhhHHHHHHHHHHhC-----CCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence 1246788888877642 467898875332 3459999999999985
|
| >3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.4e-08 Score=104.49 Aligned_cols=88 Identities=9% Similarity=0.186 Sum_probs=76.1
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchh-------------------------hHhHcCcc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQG-------------------------LARRLGVG 927 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~-------------------------L~~k~gV~ 927 (1578)
+++++|.||++||++|+...|.+.++.+.+.+.++.+..|+++.+.+ +++.|+|.
T Consensus 31 gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~ 110 (148)
T 3hcz_A 31 AKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDIY 110 (148)
T ss_dssp CSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCCC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCcC
Confidence 57999999999999999999999999999987779999999987766 99999999
Q ss_pred ccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhh
Q psy12972 928 SQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 928 ~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
+ +|+++++ ++|+....+.|..+.+++++.+.+.
T Consensus 111 ~-~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 111 A-TPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp S-SCEEEEECTTCBEEEESCCGGGHHHHHHHHHHH
T ss_pred C-CCEEEEECCCCcEEEecCCHHHHHHHHHHHHHH
Confidence 7 9999999 7898877666776666666666543
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.75 E-value=2.6e-08 Score=116.22 Aligned_cols=137 Identities=13% Similarity=0.074 Sum_probs=80.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.++.....- +..+..|.
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~~~~~~ 74 (318)
T 2dyl_A 31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEE------------------------------------NKRILMDL 74 (318)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEETTSCHHH------------------------------------HHHHHHHH
T ss_pred ceeeecCCeeEEEEEEecCCeEEEEEEecccccchH------------------------------------HHHHHHHH
Confidence 68999999999999975 899999999875422110 00001111
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~vH~ 564 (1578)
. .+.....+..-+.+-.++. .....+|||||+ |..+..+.......++...+...+.+++ +..+|. +|++|+
T Consensus 75 ~---~~~~~~~h~~i~~~~~~~~-~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~ 149 (318)
T 2dyl_A 75 D---VVLKSHDCPYIVQCFGTFI-TNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHR 149 (318)
T ss_dssp H---HHHHTTTCTTBCCEEEEEE-CSSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred H---HHHHhcCCCceeeEEEEEe-cCCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeC
Confidence 1 1112222222233333332 234568999999 5555444333345677777666666655 778898 599999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.||++. .++++|||....
T Consensus 150 dlkp~Nil~~~~~~~kl~dfg~~~~ 174 (318)
T 2dyl_A 150 DVKPSNILLDERGQIKLCDFGISGR 174 (318)
T ss_dssp CCCGGGEEECTTSCEEECCCTTC--
T ss_pred CCCHHHEEECCCCCEEEEECCCchh
Confidence 9999999974 599999997643
|
| >2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A | Back alignment and structure |
|---|
Probab=98.74 E-value=4.8e-09 Score=110.43 Aligned_cols=91 Identities=23% Similarity=0.370 Sum_probs=76.4
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEE----------------------------ECccchhhHhH
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTV----------------------------HVHNEQGLARR 923 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~V----------------------------Dc~~~~~L~~k 923 (1578)
..++++|.||++||++|+...|.++++++.++..++.+..| +++.+.+++++
T Consensus 37 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 116 (164)
T 2h30_A 37 KDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTDNGGTIAQN 116 (164)
T ss_dssp TTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEECTTCHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEcCchHHHHH
Confidence 36799999999999999999999999999875545555444 44456789999
Q ss_pred cCccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 924 LGVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 924 ~gV~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
|+|.+ +||++++ ++|+....+.|..+.++|.+++++.+.
T Consensus 117 ~~v~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 117 LNISV-YPSWALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp TTCCS-SSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred cCCCc-cceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 99998 9999999 789887777788999999999988764
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.74 E-value=6e-09 Score=128.25 Aligned_cols=131 Identities=10% Similarity=0.004 Sum_probs=81.8
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|+|+.+...+|+.||||+..+...... .+|.+
T Consensus 30 ~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~----------------------------------------~~E~~ 69 (432)
T 3p23_A 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFA----------------------------------------DREVQ 69 (432)
T ss_dssp EEEEECGGGCEEEEEESSSSEEEEEEECTTTEEEC----------------------------------------HHHHH
T ss_pred CeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHH----------------------------------------HHHHH
Confidence 68999999997666567999999999876432211 23333
Q ss_pred HHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCC---CHHHHHHHHHHHHHHHHHHcCcccc
Q psy12972 489 NAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGF---SLADVDRKLFTAFAEQIFQTGFVHA 564 (1578)
Q Consensus 489 n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~---~~~~v~~~l~~~~l~~i~~~G~vH~ 564 (1578)
.+.++ ..++. |.+=..+ .....-+|||||++| +|.+...-..... ....++..++.+ +..+|..|++|+
T Consensus 70 ~l~~l----~~HpnIv~l~~~~-~~~~~~~lv~E~~~g-~L~~~l~~~~~~~~~~~~~~i~~qi~~a-L~~LH~~~ivHr 142 (432)
T 3p23_A 70 LLRES----DEHPNVIRYFCTE-KDRQFQYIAIELCAA-TLQEYVEQKDFAHLGLEPITLLQQTTSG-LAHLHSLNIVHR 142 (432)
T ss_dssp HHHHS----CCCTTBCCEEEEE-EETTEEEEEEECCSE-EHHHHHHSSSCCCCSSCHHHHHHHHHHH-HHHHHHTTCCCC
T ss_pred HHHhc----cCCCCcCeEEEEE-ecCCEEEEEEECCCC-CHHHHHHhcCCCccchhHHHHHHHHHHH-HHHHHHCcCEeC
Confidence 33332 12333 2221222 122345799999987 6666532221122 223344444432 788999999999
Q ss_pred CCCCCCCCCC--------eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT--------WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~--------~v~liDfG~~~~ 586 (1578)
|++|.|||+. .++++|||....
T Consensus 143 DlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 143 DLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp CCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred CCCHHHEEEecCCCCCceeEEEecccceee
Confidence 9999999973 377999997643
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=9.8e-09 Score=116.71 Aligned_cols=135 Identities=8% Similarity=-0.040 Sum_probs=89.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+.. |+.||||+.+......- ..-.|.+|++
T Consensus 16 ~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~-----------------------------------~~~~~~~E~~ 59 (271)
T 3kmu_A 16 TKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTR-----------------------------------KSRDFNEECP 59 (271)
T ss_dssp EEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHH-----------------------------------HHHHHHHHGG
T ss_pred HHhcCCCcceEEEEEEC-CeeEEEEEecccccCHH-----------------------------------HHHHHHHHHH
Confidence 68999999999999974 99999999875421100 0012344554
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhHhhc-CCCHHHHHHHHHHHH--HHHHHHcC--cc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGLLEK-GFSLADVDRKLFTAF--AEQIFQTG--FV 562 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l~~~-~~~~~~v~~~l~~~~--l~~i~~~G--~v 562 (1578)
.+.++ .+..-+.+-.++.+- ....+|||||++|.+|.++..-... .++...+...+.+++ +..+|..| ++
T Consensus 60 ~l~~l----~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~ 135 (271)
T 3kmu_A 60 RLRIF----SHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIP 135 (271)
T ss_dssp GGCCC----SCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCT
T ss_pred HHHhc----CCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCcee
Confidence 44333 222223333333222 1345899999999999887432111 367777777766666 78899999 99
Q ss_pred ccCCCCCCCCCC---eeEEecCCc
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGD 583 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~ 583 (1578)
|+|++|.||++. .+++.|||.
T Consensus 136 H~dikp~Nil~~~~~~~~l~~~~~ 159 (271)
T 3kmu_A 136 RHALNSRSVMIDEDMTARISMADV 159 (271)
T ss_dssp TCCCSGGGEEECTTSCEEEEGGGS
T ss_pred cCCCccceEEEcCCcceeEEeccc
Confidence 999999999965 356665554
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=98.74 E-value=4.1e-09 Score=124.02 Aligned_cols=150 Identities=13% Similarity=0.095 Sum_probs=97.9
Q ss_pred ChhhhccccCCcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHH
Q psy12972 398 THSQLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVP 476 (1578)
Q Consensus 398 ~~~~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 476 (1578)
.+.+-|.-. +.||.|++|.||+|+. .+|+.||||+.++....... .+
T Consensus 40 ~~~~~y~~~--~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~--------------~~---------------- 87 (320)
T 3a99_A 40 PLESQYQVG--PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--------------EL---------------- 87 (320)
T ss_dssp CCTTTEEEE--EECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEE--------------EC----------------
T ss_pred CccCceEEE--EEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhh--------------hh----------------
Confidence 344444444 6799999999999985 48999999998764321100 00
Q ss_pred HHHHHhHHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCC-CcCCchhhHhhcCCCHHHHHHHHHHHH--
Q psy12972 477 LEQELDFLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDG-VKISDKEGLLEKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 477 l~~ElDf~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G-~~l~d~~~l~~~~~~~~~v~~~l~~~~-- 552 (1578)
..+-.+.+|+..+.++.. ..+. +.+-..+ ......++|||+++| .+|.++.. ....++...+...+.+++
T Consensus 88 -~~~~~~~~E~~~l~~l~~---~~~~i~~~~~~~-~~~~~~~lv~e~~~~~~~L~~~l~-~~~~l~~~~~~~i~~qi~~~ 161 (320)
T 3a99_A 88 -PNGTRVPMEVVLLKKVSS---GFSGVIRLLDWF-ERPDSFVLILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 161 (320)
T ss_dssp -TTCCEEEHHHHHHHHHCS---SSCSBCCEEEEE-ECSSEEEEEEECCSSEEEHHHHHH-HHCSCCHHHHHHHHHHHHHH
T ss_pred -hhhhHHHHHHHHHHhhcc---CCCCceEEEEEE-ecCCcEEEEEEcCCCCccHHHHHh-ccCCCCHHHHHHHHHHHHHH
Confidence 001123456666666542 1222 2222222 223456899999986 77877643 234567766666665555
Q ss_pred HHHHHHcCccccCCCCCCCCCC----eeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~----~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.|||+. .++++|||...
T Consensus 162 L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~ 198 (320)
T 3a99_A 162 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 198 (320)
T ss_dssp HHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred HHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence 7889999999999999999964 58999999753
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=2e-08 Score=118.06 Aligned_cols=137 Identities=14% Similarity=0.096 Sum_probs=88.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+........ ..+..|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~~~e~ 71 (327)
T 3aln_A 28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQ------------------------------------KQLLMDL 71 (327)
T ss_dssp CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHH------------------------------------HHHHHHH
T ss_pred heeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHH------------------------------------HHHHHHH
Confidence 67999999999999975 7999999998764321100 0111222
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH----hhcCCCHHHHHHHHHHHH--HHHHHHc-C
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL----LEKGFSLADVDRKLFTAF--AEQIFQT-G 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l----~~~~~~~~~v~~~l~~~~--l~~i~~~-G 560 (1578)
.. +...+.+..-+.+-.++. .....+|||||++| .+.++... ....++...+...+.+++ +..+|.. |
T Consensus 72 ~~---~~~~~~h~niv~~~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ 146 (327)
T 3aln_A 72 DV---VMRSSDCPYIVQFYGALF-REGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK 146 (327)
T ss_dssp HH---HHSSCCCTTBCCEEEEEE-CSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HH---HHHcCCCCcEeeeeeEEE-eCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC
Confidence 11 112222222233333332 23456799999998 55554321 134566666666555555 7788998 9
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|.||+++ .++++|||....
T Consensus 147 ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp CCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 99999999999964 699999997643
|
| >3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.73 E-value=2.1e-08 Score=103.17 Aligned_cols=86 Identities=16% Similarity=0.261 Sum_probs=74.7
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHh-CCCceEEEEEECcc-------------------------chhhHhHcCc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDEL-SPLGVGFFTVHVHN-------------------------EQGLARRLGV 926 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l-~~~~v~~a~VDc~~-------------------------~~~L~~k~gV 926 (1578)
+++++|.||++||++|+...|.+.++++.+ .+.++.+..|+++. +..+++.|+|
T Consensus 33 gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 112 (148)
T 3fkf_A 33 NRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAI 112 (148)
T ss_dssp TSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTC
T ss_pred CcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcCC
Confidence 679999999999999999999999999999 77779999998876 4489999999
Q ss_pred cccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 927 GSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 927 ~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
.+ +|+++++ ++|+...... +.+++.+++.+.+
T Consensus 113 ~~-~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll 145 (148)
T 3fkf_A 113 LT-LPTNILLSPTGKILARDI---QGEALTGKLKELL 145 (148)
T ss_dssp CS-SSEEEEECTTSBEEEESC---CHHHHHHHHHHHC
T ss_pred CC-cCEEEEECCCCeEEEecC---CHHHHHHHHHHHH
Confidence 97 9999999 7887665442 7788998888765
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=98.73 E-value=9.7e-09 Score=125.84 Aligned_cols=132 Identities=18% Similarity=0.186 Sum_probs=86.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+...+... +.+|+
T Consensus 60 ~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~-----------------------------------------~~~E~ 98 (420)
T 1j1b_A 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-----------------------------------------KNREL 98 (420)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEECCTTS-----------------------------------------CCHHH
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEecccchh-----------------------------------------HHHHH
Confidence 67999999999999975 6999999987543110 01244
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC---CCc--eEEEEeccCCCcCCchhh-H--hhcCCCHHHHHHHHHHHH--HHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK---SST--RVLTTEFIDGVKISDKEG-L--LEKGFSLADVDRKLFTAF--AEQIF 557 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~---~t~--~VLVME~i~G~~l~d~~~-l--~~~~~~~~~v~~~l~~~~--l~~i~ 557 (1578)
+.+.++ .+...|.+-.++... ... -+|||||++|. +.+... . ....++...+...+.+++ +..+|
T Consensus 99 ~il~~l----~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH 173 (420)
T 1j1b_A 99 QIMRKL----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173 (420)
T ss_dssp HHHHTC----CCTTBCCEEEEEEEEETTTTEEEEEEEEECCCEE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHc----CCCCccceeeEEeccCCCCcceeEEeehhccccc-HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 444433 333334444443211 111 35899999873 333221 1 124566666666665655 78899
Q ss_pred HcCccccCCCCCCCCCC----eeEEecCCchhh
Q psy12972 558 QTGFVHADPHSGNDVNT----WLYPVDLGDKFR 586 (1578)
Q Consensus 558 ~~G~vH~DpHPGNilv~----~v~liDfG~~~~ 586 (1578)
..|++|+|+||.|||+. .++++|||....
T Consensus 174 ~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 174 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp TTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred HCCccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 99999999999999964 379999997643
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=5e-09 Score=134.43 Aligned_cols=137 Identities=17% Similarity=0.170 Sum_probs=93.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.++..... ..-.+.+|+
T Consensus 20 ~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~------------------------------------~~~~~~~Ei 63 (676)
T 3qa8_A 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK------------------------------------NRERWCLEI 63 (676)
T ss_dssp CCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHH------------------------------------HHHHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHH------------------------------------HHHHHHHHH
Confidence 67999999999999964 79999999987643211 011345677
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC---C--CCceEEEEeccCCCcCCchhhHhh--cCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD---K--SSTRVLTTEFIDGVKISDKEGLLE--KGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~---~--~t~~VLVME~i~G~~l~d~~~l~~--~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
+.+.++. +...+.+-.++.. . ....+|||||++|.+|.++..... .+++...+...+.+++ +..+|.
T Consensus 64 ~iL~~L~----HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs 139 (676)
T 3qa8_A 64 QIMKKLN----HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139 (676)
T ss_dssp HHHHHCC----BTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCC----CCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 6666653 2222333333222 1 344589999999999988743211 1456556655555555 788999
Q ss_pred cCccccCCCCCCCCCC------eeEEecCCchh
Q psy12972 559 TGFVHADPHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~------~v~liDfG~~~ 585 (1578)
.|++|+|++|+||++. .++++|||...
T Consensus 140 ~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~ 172 (676)
T 3qa8_A 140 NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 172 (676)
T ss_dssp TTBCCCCCCSTTEEEECCSSSCEEEECSCCCCC
T ss_pred CCCccCCCCHHHeEeecCCCceeEEEccccccc
Confidence 9999999999999964 27788888654
|
| >3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A | Back alignment and structure |
|---|
Probab=98.72 E-value=3.4e-09 Score=111.25 Aligned_cols=90 Identities=9% Similarity=0.079 Sum_probs=64.5
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc-cchhhHhHcCccccCCcEEEEc-CCccccccCCC-
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-NEQGLARRLGVGSQLPQIALLT-DGRTSFFKEPS- 948 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~-~~~~L~~k~gV~~~~PTl~lf~-~G~~~~y~~G~- 948 (1578)
.+++++|.|||+||++|+.+.|.+.+......-.+..|+.||++ +..+++.+++|.+ +||+++|. +|+.+....|.
T Consensus 43 ~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~~v~~-~PT~~f~~~~G~~v~~~~G~~ 121 (151)
T 3ph9_A 43 SKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQY-VPRIMFVDPSLTVRADIAGRY 121 (151)
T ss_dssp HTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCTTCCC-SSEEEEECTTSCBCTTCCCSC
T ss_pred cCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhcCCCC-CCEEEEECCCCCEEEEEeCCc
Confidence 47999999999999999999999986432211001345566664 3456788999998 99999997 89877666676
Q ss_pred ---------CCHHHHHHHHHhhC
Q psy12972 949 ---------FSVQKMVEFFRLKL 962 (1578)
Q Consensus 949 ---------~s~~~L~~fi~~~l 962 (1578)
.+.+.+++.+++.+
T Consensus 122 ~~~~~~~~~~~~~~ll~~~~~al 144 (151)
T 3ph9_A 122 SNRLYTYEPRDLPLLIENMKKAL 144 (151)
T ss_dssp TTSTTCCCGGGHHHHHHHHHHHH
T ss_pred CCcccccchhhHHHHHHHHHHHH
Confidence 33455666665543
|
| >2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B} | Back alignment and structure |
|---|
Probab=98.70 E-value=1.9e-08 Score=104.48 Aligned_cols=89 Identities=15% Similarity=0.202 Sum_probs=77.6
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEE-----------------------CccchhhHhHcCcccc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVH-----------------------VHNEQGLARRLGVGSQ 929 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VD-----------------------c~~~~~L~~k~gV~~~ 929 (1578)
.++++|.||++||++|+...|.+.++++.+.+.++.+..|+ ++.+..+++.|+|.+
T Consensus 28 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~- 106 (153)
T 2l5o_A 28 GKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV- 106 (153)
T ss_dssp TCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS-
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc-
Confidence 67899999999999999999999999999987678887665 345678999999997
Q ss_pred CCcEEEE-cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 930 LPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 930 ~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|+++++ ++|+....+.|..+.++|.+++++.+
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 140 (153)
T 2l5o_A 107 YPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAW 140 (153)
T ss_dssp SSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHH
T ss_pred cCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 9999998 78887766778899999999998766
|
| >3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls} | Back alignment and structure |
|---|
Probab=98.69 E-value=4.2e-08 Score=101.78 Aligned_cols=92 Identities=16% Similarity=0.282 Sum_probs=77.9
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccch----------------------hhHhHcCcccc
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQ----------------------GLARRLGVGSQ 929 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~----------------------~L~~k~gV~~~ 929 (1578)
..++++|.||++||++|+...|.+.++++.+.+.++.+..|+++.+. .+++.|+|.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~- 105 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKG- 105 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCS-
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCC-
Confidence 36799999999999999999999999999998877999999988655 6889999997
Q ss_pred CCcEEEE-cCCccccccCCCC--CHHHHHHHHHhhCCC
Q psy12972 930 LPQIALL-TDGRTSFFKEPSF--SVQKMVEFFRLKLPY 964 (1578)
Q Consensus 930 ~PTl~lf-~~G~~~~y~~G~~--s~~~L~~fi~~~lp~ 964 (1578)
+|+++++ ++|+....+.|.. +.++|.++|++.+..
T Consensus 106 ~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~ 143 (152)
T 3gl3_A 106 MPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGG 143 (152)
T ss_dssp SSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC-
T ss_pred CCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHcc
Confidence 9998888 7888776555643 457999999887743
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.69 E-value=2.6e-08 Score=118.55 Aligned_cols=135 Identities=16% Similarity=0.082 Sum_probs=74.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+...+-... . .+..|.
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~-------------------------------------~~~~~~ 70 (360)
T 3e3p_A 29 RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR-N-------------------------------------RELQIM 70 (360)
T ss_dssp ----------CEEEEETTTCCEEEEEEEECCTTCC-C-------------------------------------HHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEecCcccc-H-------------------------------------HHHHHH
Confidence 68999999999999975 79999999875432110 0 011222
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC------ceEEEEeccCCCcCCchhhH--hhcCCCHHHHHHHHHHHH--HHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS------TRVLTTEFIDGVKISDKEGL--LEKGFSLADVDRKLFTAF--AEQIF 557 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t------~~VLVME~i~G~~l~d~~~l--~~~~~~~~~v~~~l~~~~--l~~i~ 557 (1578)
+.+..+ .+...+.+-..+..... --+|||||++|.....+... ....++...+...+.+++ +..+|
T Consensus 71 ~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 146 (360)
T 3e3p_A 71 QDLAVL----HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH 146 (360)
T ss_dssp HHHHHH----CCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhc----CCCCcccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 223332 23333444343322111 14699999998533332221 223455555555555544 67788
Q ss_pred --HcCccccCCCCCCCCCC----eeEEecCCchh
Q psy12972 558 --QTGFVHADPHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 558 --~~G~vH~DpHPGNilv~----~v~liDfG~~~ 585 (1578)
..|++|+|++|.|||+. .++++|||...
T Consensus 147 ~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~ 180 (360)
T 3e3p_A 147 LPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAK 180 (360)
T ss_dssp STTTCCBCSCCCGGGEEEETTTTEEEECCCTTCB
T ss_pred CCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCce
Confidence 99999999999999963 58999999764
|
| >3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.67 E-value=3e-08 Score=103.79 Aligned_cols=90 Identities=13% Similarity=0.167 Sum_probs=78.1
Q ss_pred CCcEEEEEEcCCCccccc-ccHHHHHHHHHhCCCceEEEEEEC----------------------------ccchh----
Q psy12972 873 TTPHLILFYSDWCFACLQ-VEPIFKKLMDELSPLGVGFFTVHV----------------------------HNEQG---- 919 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~-l~p~~~~lA~~l~~~~v~~a~VDc----------------------------~~~~~---- 919 (1578)
.++++|.||++||++|+. +.|.+.++++.+++.++.+..|++ +....
T Consensus 30 gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (160)
T 3lor_A 30 GKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQRI 109 (160)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCSS
T ss_pred CCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccchh
Confidence 689999999999999999 599999999999887899999986 22334
Q ss_pred --hHhHcCccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 920 --LARRLGVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 920 --L~~k~gV~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+++.|+|.+ +|+++++ ++|+....+.|..+.+.|.+.|.+.+.
T Consensus 110 ~~~~~~~~v~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 110 PSTMKKYRLEG-TPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp CHHHHHTTCCS-SSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHT
T ss_pred hhHHHhcccCc-cceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHh
Confidence 899999998 9999999 688887777798999999999987764
|
| >3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0 | Back alignment and structure |
|---|
Probab=98.67 E-value=3.5e-09 Score=107.22 Aligned_cols=79 Identities=13% Similarity=0.108 Sum_probs=56.5
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC----Ccceeeeeecc---cCccccccCCcc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL----GVGFFTVHYDL---FGTTDGFSGQDS 820 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~----~vg~v~~~~~~---~~~~~~i~g~~~ 820 (1578)
..++..+|++.+. +++++++|.||||||+||+++.|.|+++|+.+... .+.++.++++. +|...++.+
T Consensus 18 ~~l~~~~f~~~~~--~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~--- 92 (127)
T 3h79_A 18 VELTDETFDSIVM--DPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSG--- 92 (127)
T ss_dssp EECCTTTHHHHHT--CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCS---
T ss_pred EECChhhHHHHHh--CCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCcc---
Confidence 4567778888885 35789999999999999999999999999987532 24343333322 444444444
Q ss_pred ccccccccccCcccccccccc
Q psy12972 821 ASRNFHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 821 ~~~~~~~i~~~Ptiklf~~~~ 841 (1578)
+||+.+|..+-
T Consensus 93 ----------~Pt~~~~~~g~ 103 (127)
T 3h79_A 93 ----------FPTMRYYTRID 103 (127)
T ss_dssp ----------SSEEEEECSSC
T ss_pred ----------CCEEEEEeCCC
Confidence 49988887653
|
| >2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP} | Back alignment and structure |
|---|
Probab=98.67 E-value=4.7e-08 Score=101.82 Aligned_cols=87 Identities=14% Similarity=0.233 Sum_probs=74.1
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc-------------------------chhhHhHcCcc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-------------------------EQGLARRLGVG 927 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~-------------------------~~~L~~k~gV~ 927 (1578)
.++++|.||++||++|+...|.+.++++.+.+.++.+..|+++. +..+++.|+|.
T Consensus 29 gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 108 (152)
T 2lrn_A 29 GKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIV 108 (152)
T ss_dssp TSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCCC
Confidence 57999999999999999999999999999988779999999987 57899999999
Q ss_pred ccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 928 SQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 928 ~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+ +|+++++ ++|+....+ .+.+++.+++++.+.
T Consensus 109 ~-~P~~~lid~~G~i~~~~---~~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 109 G-FPHIILVDPEGKIVAKE---LRGDDLYNTVEKFVN 141 (152)
T ss_dssp S-SCEEEEECTTSEEEEEC---CCTTHHHHHHHHHHT
T ss_pred c-CCeEEEECCCCeEEEee---CCHHHHHHHHHHHHh
Confidence 7 9999999 788876544 244677777776553
|
| >3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi} | Back alignment and structure |
|---|
Probab=98.66 E-value=3.7e-08 Score=103.01 Aligned_cols=90 Identities=13% Similarity=0.123 Sum_probs=77.6
Q ss_pred CCcEEEEEEcCCCcccccc-cHHHHHHHHHhCCCceEEEEEECc----------------------------cch-----
Q psy12972 873 TTPHLILFYSDWCFACLQV-EPIFKKLMDELSPLGVGFFTVHVH----------------------------NEQ----- 918 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l-~p~~~~lA~~l~~~~v~~a~VDc~----------------------------~~~----- 918 (1578)
.++++|.||++||++|+.. .|.+.++++.+++.++.+..|+++ .+.
T Consensus 28 gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 107 (158)
T 3eyt_A 28 GKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAMP 107 (158)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSSC
T ss_pred CCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhhH
Confidence 6799999999999999996 999999999998777999999863 222
Q ss_pred hhHhHcCccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 919 GLARRLGVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 919 ~L~~k~gV~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
.+++.|+|.+ +|+++++ ++|+....+.|..+.++|.+.+.+.+.
T Consensus 108 ~~~~~~~v~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 152 (158)
T 3eyt_A 108 RTMAAYQMRG-TPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLG 152 (158)
T ss_dssp HHHHHTTCCS-SSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred HHHHHcCCCC-CCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhc
Confidence 5899999998 9999888 788887777788999999999987764
|
| >3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.65 E-value=4.4e-08 Score=102.00 Aligned_cols=87 Identities=20% Similarity=0.413 Sum_probs=77.9
Q ss_pred CcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEEC---------------------------ccchhhHhHcCc
Q psy12972 874 TPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV---------------------------HNEQGLARRLGV 926 (1578)
Q Consensus 874 ~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc---------------------------~~~~~L~~k~gV 926 (1578)
++++|.||++||++|+...|.+.++++.+ ++.+..|++ +.+..+++.|+|
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKV 107 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSB
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCC
Confidence 78999999999999999999999999999 488999998 366789999999
Q ss_pred cccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 927 GSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 927 ~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
.+ +|+++++ ++|+....+.|..+.++|.+++++....
T Consensus 108 ~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~ 145 (154)
T 3ia1_A 108 LG-QPWTFVVDREGKVVALFAGRAGREALLDALLLAGAD 145 (154)
T ss_dssp CS-SCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCC
T ss_pred Cc-ccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCc
Confidence 97 9998888 7898877777989999999999988754
|
| >4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.65 E-value=5.4e-08 Score=98.13 Aligned_cols=88 Identities=18% Similarity=0.300 Sum_probs=75.0
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEEC----------------------------ccchhhHhH
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV----------------------------HNEQGLARR 923 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc----------------------------~~~~~L~~k 923 (1578)
.+++++|.||++||++|+...|.+.++++.+.. ++.+..|++ +.+..+++.
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 99 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD-DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLET 99 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT-TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC-CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHH
Confidence 367899999999999999999999999998544 488888854 335579999
Q ss_pred cCccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhh
Q psy12972 924 LGVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 924 ~gV~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
|+|.+ +|+++++ ++|+....+.|..+.+++.+++++.
T Consensus 100 ~~v~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 100 YGVRS-YPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp TTCCS-SSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred cCccc-CCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 99997 9999999 8898877777989999999998753
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=98.65 E-value=2.5e-08 Score=121.15 Aligned_cols=132 Identities=19% Similarity=0.190 Sum_probs=86.8
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..++..||||.....-.. . .+|++
T Consensus 46 ~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-----------------------~------------------~~E~~ 84 (394)
T 4e7w_A 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-----------------------K------------------NRELQ 84 (394)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-----------------------C------------------CHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-----------------------H------------------HHHHH
Confidence 689999999999999887777999977532110 0 12444
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCC---Cc--eEEEEeccCCCcCCchhhHh--hcCCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKS---ST--RVLTTEFIDGVKISDKEGLL--EKGFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~---t~--~VLVME~i~G~~l~d~~~l~--~~~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
.++++ .+...+.+-.++..-. .. -+|||||++|..+..+.... ...++...+...+.+++ +..+|..
T Consensus 85 il~~l----~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 160 (394)
T 4e7w_A 85 IMRIV----KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI 160 (394)
T ss_dssp HHHTC----CCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhC----CCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 44333 2333344433332211 11 45999999885444332211 34566666665555555 7889999
Q ss_pred CccccCCCCCCCCCC----eeEEecCCchh
Q psy12972 560 GFVHADPHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 560 G~vH~DpHPGNilv~----~v~liDfG~~~ 585 (1578)
|++|+|+||.|||+. .++++|||...
T Consensus 161 ~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 161 GICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred CccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 999999999999974 48999999764
|
| >2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.63 E-value=4.3e-07 Score=103.42 Aligned_cols=195 Identities=15% Similarity=0.172 Sum_probs=128.7
Q ss_pred Eeecc-ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 856 LSTTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 856 i~Lt~-~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
..|+. +.+++.+ ..+++++|.|+++|| ....+.|.++|..+++. +.|+.+ .+.++++++++++ |+|+
T Consensus 9 ~~l~s~~~~~~~l---~~~~v~vvgff~~~~---~~~~~~f~~~A~~lr~~-~~F~~~---~~~~v~~~~~~~~--p~i~ 76 (252)
T 2h8l_A 9 VPLRTEEEFKKFI---SDKDASIVGFFDDSF---SEAHSEFLKAASNLRDN-YRFAHT---NVESLVNEYDDNG--EGII 76 (252)
T ss_dssp EECCSHHHHHHHH---TSSSCEEEEEESCTT---SHHHHHHHHHHHHTTTT-SCEEEE---CCHHHHHHHCSSS--EEEE
T ss_pred eeecCHHHHHHHh---hcCCeEEEEEECCCC---ChHHHHHHHHHHhcccC-cEEEEE---ChHHHHHHhCCCC--CcEE
Confidence 34543 3444434 346789999999985 45678999999999776 888876 4578999999975 9999
Q ss_pred EEcCC--------ccccccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEec-cC-Cch----H
Q psy12972 935 LLTDG--------RTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQ-RS-LPV----R 1000 (1578)
Q Consensus 935 lf~~G--------~~~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~-~~-~~~----~ 1000 (1578)
+|+.+ ....|..|.++.++|.+||....-| ++..+|.+++..+.+. .. +++++. +. ... .
T Consensus 77 ~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~P-lv~e~t~~n~~~~~~~----~~-~v~~~~~~~~~~~~~~~~ 150 (252)
T 2h8l_A 77 LFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFG-ICPHMTEDNKDLIQGK----DL-LIAYYDVDYEKNAKGSNY 150 (252)
T ss_dssp EECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSC-SSCEECTTTHHHHSSS----SE-EEEEECCBTTTBHHHHHH
T ss_pred EEcchhhcccccccccccCCCCcCHHHHHHHHHhcccC-CeeecccccHhhhcCC----Ce-EEEEeecchhhcchhHHH
Confidence 99853 2333315888999999999876533 4888899998887322 32 334432 21 111 1
Q ss_pred H--HHHHHHhhcCCC---eEEEEEEcccCCChhHHhhcCC--C-CCCcEEEEeccCCCCCccccccCCCCchh--hhhhh
Q psy12972 1001 L--RYLINAFKHRTT---IVFGVIVYDQEDSSSVFQRFKV--P-GDKDSLLIFKEDKDRPSASITMNSIPVPT--LQDIT 1070 (1578)
Q Consensus 1001 ~--~~~~~a~~~~~~---v~Fg~v~~~~~~~~~l~~kf~V--~-~~~Ptllvfk~~~~~~~~~l~~~~l~~~~--L~~fI 1070 (1578)
+ .....|.+++++ +.|++++.+ ....+++.||+ . ...|++++++.... .|...++++... |.+|+
T Consensus 151 ~~~~~~~vA~~~~~k~~~~~F~~~d~~--~~~~~~~~fgl~~~~~~~P~v~i~~~~~~---ky~~~~~~t~~~~~i~~F~ 225 (252)
T 2h8l_A 151 WRNRVMMVAKKFLDAGHKLNFAVASRK--TFSHELSDFGLESTAGEIPVVAIRTAKGE---KFVMQEEFSRDGKALERFL 225 (252)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEETT--TTHHHHGGGTCCCCSCSSCEEEEECTTSC---EEECCSCCCTTSHHHHHHH
T ss_pred HHHHHHHHHHHccccCceEEEEEEchH--HHHHHHHHcCCCCccCCCCEEEEEeCcCc---EecCCcccCcchHHHHHHH
Confidence 1 112233355555 999999654 56678999999 3 25789999854222 222234566666 88887
Q ss_pred hcC
Q psy12972 1071 DNN 1073 (1578)
Q Consensus 1071 ~~n 1073 (1578)
+.-
T Consensus 226 ~~~ 228 (252)
T 2h8l_A 226 QDY 228 (252)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
|
| >2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=98.62 E-value=2.8e-08 Score=97.87 Aligned_cols=78 Identities=9% Similarity=0.229 Sum_probs=69.2
Q ss_pred CcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHH
Q psy12972 874 TPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQK 953 (1578)
Q Consensus 874 ~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~ 953 (1578)
.+.++.|+++||+.|+.+.|.+++++.++. +.+.+||.+++++++.+||+ . .|++++|.+|+... .|..+.+.
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~~---i~~~~vDId~d~~l~~~ygv-~-VP~l~~~~dG~~v~--~g~~~~~~ 101 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKSW---FELEVINIDGNEHLTRLYND-R-VPVLFAVNEDKELC--HYFLDSDV 101 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHSC---CCCEEEETTTCHHHHHHSTT-S-CSEEEETTTTEEEE--CSSCCCHH
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhcC---CeEEEEECCCCHHHHHHhCC-C-CceEEEEECCEEEE--ecCCCHHH
Confidence 356999999999999999999999998874 88999999999999999999 4 89999999998762 37788899
Q ss_pred HHHHH
Q psy12972 954 MVEFF 958 (1578)
Q Consensus 954 L~~fi 958 (1578)
|.+|+
T Consensus 102 L~~~L 106 (107)
T 2fgx_A 102 IGAYL 106 (107)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99887
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.61 E-value=8e-09 Score=120.79 Aligned_cols=135 Identities=15% Similarity=0.099 Sum_probs=88.8
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+... .||||+.+......- .. -.+.+|++
T Consensus 39 ~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~-------------------~~----------------~~~~~e~~ 81 (319)
T 2y4i_B 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNED-------------------QL----------------KAFKREVM 81 (319)
T ss_dssp CBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCC-------------------CC----------------CCCCTTGG
T ss_pred eEeccCCceEEEEEEEcC--eEEEEEeecCCCCHH-------------------HH----------------HHHHHHHH
Confidence 689999999999998743 599999865321100 00 01123333
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++ .+...+.+-.++. ....-++||||++|.+|.++..-....++...+...+.+++ +..+|..|++|+|+
T Consensus 82 ~l~~l----~h~~iv~~~~~~~-~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl 156 (319)
T 2y4i_B 82 AYRQT----RHENVVLFMGACM-SPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDL 156 (319)
T ss_dssp GGTTC----CCTTBCCCCEEEE-CSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred HHhcC----CCCCEeEEEEEEe-cCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Confidence 33332 2222233333332 23456899999999999887432223467666666666655 78899999999999
Q ss_pred CCCCCCCC--eeEEecCCchh
Q psy12972 567 HSGNDVNT--WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~--~v~liDfG~~~ 585 (1578)
+|.||++. .++++|||...
T Consensus 157 kp~NIl~~~~~~~l~Dfg~~~ 177 (319)
T 2y4i_B 157 KSKNVFYDNGKVVITDFGLFS 177 (319)
T ss_dssp CSTTEEEC--CCEECCCSCCC
T ss_pred ChhhEEEeCCCEEEeecCCcc
Confidence 99999965 58899999753
|
| >3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.60 E-value=1.3e-08 Score=102.50 Aligned_cols=78 Identities=13% Similarity=0.069 Sum_probs=58.7
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecccCccccccCCcccccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDLFGTTDGFSGQDSASRNFHNH 828 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~~~~~~~i~g~~~~~~~~~~i 828 (1578)
.++..+|.+.+.+++.+++++|.||||||++|+.+.|.++++|+++.+ +.++.++.+......+ +
T Consensus 7 ~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~--v~f~kvd~d~~~~~~~-------------v 71 (118)
T 3evi_A 7 EISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE--TKFVKAIVNSCIQHYH-------------D 71 (118)
T ss_dssp ECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT--SEEEEEEGGGTSTTCC-------------G
T ss_pred EeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC--CEEEEEEhHHhHHHCC-------------C
Confidence 346678888887655566999999999999999999999999999864 5565665555433333 3
Q ss_pred ccCcccccccccc
Q psy12972 829 MYNPFDDVFSEGF 841 (1578)
Q Consensus 829 ~~~Ptiklf~~~~ 841 (1578)
..-||+.+|++|.
T Consensus 72 ~~~PT~~~fk~G~ 84 (118)
T 3evi_A 72 NCLPTIFVYKNGQ 84 (118)
T ss_dssp GGCSEEEEEETTE
T ss_pred CCCCEEEEEECCE
Confidence 3449998988764
|
| >3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei} | Back alignment and structure |
|---|
Probab=98.60 E-value=5.1e-09 Score=103.10 Aligned_cols=73 Identities=22% Similarity=0.388 Sum_probs=51.3
Q ss_pred ccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccccccc
Q psy12972 753 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNFHNHM 829 (1578)
Q Consensus 753 ~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i~ 829 (1578)
.+|++.+.. .++++++|+|||||||||+.+.|.|+++++.+.+.. ++.++.+. +++..++.
T Consensus 9 ~~f~~~l~~-~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~~~--~~~vd~d~~~~l~~~~~V~------------- 72 (105)
T 3zzx_A 9 EDFTKQLNE-AGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSDVV--FLKVDVDECEDIAQDNQIA------------- 72 (105)
T ss_dssp HHHHHHHHH-TTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEE--EEEEETTTCHHHHHHTTCC-------------
T ss_pred HHHHHHHHh-cCCCEEEEEEECCCCCCccCCCcchhhhhhccCCeE--EEEEecccCHHHHHHcCCC-------------
Confidence 356665532 357899999999999999999999999999987543 33333332 34444444
Q ss_pred cCcccccccccc
Q psy12972 830 YNPFDDVFSEGF 841 (1578)
Q Consensus 830 ~~Ptiklf~~~~ 841 (1578)
..||+.+|.+|-
T Consensus 73 ~~PT~~~~~~G~ 84 (105)
T 3zzx_A 73 CMPTFLFMKNGQ 84 (105)
T ss_dssp BSSEEEEEETTE
T ss_pred eecEEEEEECCE
Confidence 449988887653
|
| >2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A | Back alignment and structure |
|---|
Probab=98.58 E-value=4.8e-08 Score=103.49 Aligned_cols=86 Identities=16% Similarity=0.303 Sum_probs=71.2
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEE-----------------------CccchhhHhHcCccc
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVH-----------------------VHNEQGLARRLGVGS 928 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VD-----------------------c~~~~~L~~k~gV~~ 928 (1578)
.+++++|.||++||++|+...|.++++++. ++.+..|+ ++.+..+++.|+|.+
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 125 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYG 125 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCccc
Confidence 468999999999999999999999999876 47777777 345668999999997
Q ss_pred cCCcEE-EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 929 QLPQIA-LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 929 ~~PTl~-lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|+.+ +.++|+....+.|..+.+.+.+++++.+
T Consensus 126 -~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 159 (168)
T 2b1k_A 126 -APETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLW 159 (168)
T ss_dssp -SSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHH
T ss_pred -cCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 99554 5578988766678889999988887655
|
| >3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=98.58 E-value=2.8e-08 Score=106.50 Aligned_cols=79 Identities=15% Similarity=0.209 Sum_probs=64.3
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccH-HH--HHHHHHhCCCceEEEEEECccchhhHhHc--------Ccc
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEP-IF--KKLMDELSPLGVGFFTVHVHNEQGLARRL--------GVG 927 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p-~~--~~lA~~l~~~~v~~a~VDc~~~~~L~~k~--------gV~ 927 (1578)
+++.|.... ..++++||.|||+||++|+.+.| .| .++++.+++. +.+++||.++.+++++.| ||.
T Consensus 28 ~~ea~~~A~---~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~-fv~ikVD~de~~~l~~~y~~~~q~~~gv~ 103 (173)
T 3ira_A 28 GEEAFEKAR---KENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEA-FVSIKVDREERPDIDNIYMTVCQIILGRG 103 (173)
T ss_dssp SHHHHHHHH---HHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHH-CEEEEEETTTCHHHHHHHHHHHHHHHSCC
T ss_pred CHHHHHHHH---HhCCCEEEecccchhHhhccccccccCCHHHHHHHHhc-CceeeeCCcccCcHHHHHHHHHHHHcCCC
Confidence 344555433 34799999999999999999999 44 5777777653 889999999999999998 999
Q ss_pred ccCCcEEEEc-CCccc
Q psy12972 928 SQLPQIALLT-DGRTS 942 (1578)
Q Consensus 928 ~~~PTl~lf~-~G~~~ 942 (1578)
+ +||+++|. +|+++
T Consensus 104 g-~Pt~v~l~~dG~~v 118 (173)
T 3ira_A 104 G-WPLNIIMTPGKKPF 118 (173)
T ss_dssp C-SSEEEEECTTSCEE
T ss_pred C-CcceeeECCCCCce
Confidence 8 99999995 78765
|
| >1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A | Back alignment and structure |
|---|
Probab=98.57 E-value=3e-08 Score=105.96 Aligned_cols=83 Identities=10% Similarity=0.001 Sum_probs=67.4
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcC---ccccCCcEEEEcCC-ccccccCC
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLG---VGSQLPQIALLTDG-RTSFFKEP 947 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~g---V~~~~PTl~lf~~G-~~~~y~~G 947 (1578)
.+++++|.|||+||++|+.+.|.+++++..+. ++.+..||.+.+++++.+|+ |.+ +||+++|.+| +..... |
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~~~~~~~~~~~~v~~-iPt~i~~~~~G~~~~~~-g 128 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKGRAEDDLRQRLALERIA-IPLVLVLDEEFNLLGRF-V 128 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHHHHHTTTTTTCSSCC-SSEEEEECTTCCEEEEE-E
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCCHHHHHHHHHcCCCC-cCeEEEECCCCCEEEEE-c
Confidence 35789999999999999999999999998875 38999999999999999997 997 9999999875 655444 5
Q ss_pred CCCHHHHHHHHH
Q psy12972 948 SFSVQKMVEFFR 959 (1578)
Q Consensus 948 ~~s~~~L~~fi~ 959 (1578)
.+. ..+.+.+.
T Consensus 129 ~~p-~~~~~~i~ 139 (167)
T 1z6n_A 129 ERP-QAVLDGGP 139 (167)
T ss_dssp SSC-HHHHHHCH
T ss_pred CCC-HHHHHhHH
Confidence 444 44444443
|
| >1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A | Back alignment and structure |
|---|
Probab=98.57 E-value=4.1e-08 Score=93.19 Aligned_cols=74 Identities=20% Similarity=0.357 Sum_probs=63.8
Q ss_pred EEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHHH
Q psy12972 877 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVE 956 (1578)
Q Consensus 877 LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~ 956 (1578)
++.|++|||++|+.+.|.+++++..+ +.+||.+++++++++||++ .||+++ .+|+.+. |..+.+.|.+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------~~~vdid~~~~l~~~~g~~--vPtl~~-~~G~~v~---g~~~~~~L~~ 70 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------FFSVFIDDDAALESAYGLR--VPVLRD-PMGRELD---WPFDAPRLRA 70 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------EEEEECTTCHHHHHHHTTT--CSEEEC-TTCCEEE---SCCCHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------eEEEECCCCHHHHHHhCCC--cCeEEE-ECCEEEe---CCCCHHHHHH
Confidence 78899999999999999998876432 6799999999999999994 899998 8888763 7789999999
Q ss_pred HHHhhC
Q psy12972 957 FFRLKL 962 (1578)
Q Consensus 957 fi~~~l 962 (1578)
++.+.+
T Consensus 71 ~l~~~~ 76 (87)
T 1ttz_A 71 WLDAAP 76 (87)
T ss_dssp HHHTCC
T ss_pred HHHHHH
Confidence 997655
|
| >3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.56 E-value=7.4e-07 Score=101.41 Aligned_cols=191 Identities=10% Similarity=0.007 Sum_probs=127.9
Q ss_pred ccccceecccCC-CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCC
Q psy12972 861 WNFEKNYIPKSY-TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDG 939 (1578)
Q Consensus 861 ~nF~~~vl~~s~-~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G 939 (1578)
+++++.+ +. +++++|.|++++| ....+.|.++|+.+++. +.|+.+ .+.++++++++++ |+|++|+.+
T Consensus 15 ~~~~~~~---~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~-~~F~~t---~~~~v~~~~~v~~--p~ivlfk~~ 82 (250)
T 3ec3_A 15 KQVQEFL---KDGDDVVILGVFQGVG---DPGYLQYQDAANTLRED-YKFHHT---FSTEIAKFLKVSL--GKLVLMQPE 82 (250)
T ss_dssp HHHHHHH---HHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTT-CCEEEE---CCHHHHHHHTCCS--SEEEEECCG
T ss_pred HHHHHHH---hcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhcC-cEEEEE---CcHHHHHHcCCCC--CeEEEEecc
Confidence 5566554 33 6899999999985 46778999999999876 888875 4678999999975 999999852
Q ss_pred --------ccccccC-CCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEeccCC---chH----HH-
Q psy12972 940 --------RTSFFKE-PSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSL---PVR----LR- 1002 (1578)
Q Consensus 940 --------~~~~y~~-G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~---~~~----~~- 1002 (1578)
....|.+ |.++.++|.+|+....-| ++..+|.++...+..+. ..++++++.+.. ... ..
T Consensus 83 ~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~P-lv~e~t~~n~~~~~~~~---~l~~~~~~~d~~~~~~~~~~~~~~~ 158 (250)
T 3ec3_A 83 KFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALP-LVGHRKTSNDAKRYSKR---PLVVVYYSVDFSFDYRTATQFWRNK 158 (250)
T ss_dssp GGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSC-TEEEECTTTHHHHSCSS---SEEEEEECCCCSTTTHHHHHHHHHH
T ss_pred hhhccccccceeccCCCCCCHHHHHHHHHHcCCC-ceeecCccchhhhhccC---ccEEEEEecccccccchhHHHHHHH
Confidence 2344543 579999999999877643 47888888888766432 333333322211 111 12
Q ss_pred HHHHHhhcCCCeEEEEEEcccCCChhHHhhcCCCC--CCcEEEEeccCCCCCcccc-ccCCCCchhhhhhhhcC
Q psy12972 1003 YLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPG--DKDSLLIFKEDKDRPSASI-TMNSIPVPTLQDITDNN 1073 (1578)
Q Consensus 1003 ~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~--~~Ptllvfk~~~~~~~~~l-~~~~l~~~~L~~fI~~n 1073 (1578)
+...|.+++ ++.|++++. ......++.||+.. .+|.++++..+.. .|. ..++++...|.+|++.-
T Consensus 159 ~~~vAk~~k-ki~F~~~d~--~~~~~~l~~fgl~~~~~~p~~~~~~~~~~---ky~~~~~~~t~~~i~~Fv~~~ 226 (250)
T 3ec3_A 159 VLEVAKDFP-EYTFAIADE--EDYATEVKDLGLSESGGDVNAAILDESGK---KFAMEPEEFDSDALREFVMAF 226 (250)
T ss_dssp HHHHHTTCT-TSEEEEEET--TTTHHHHHHTTCSSCSCSCEEEEECTTSC---EEECCCCSCCHHHHHHHHHHH
T ss_pred HHHHHHhhc-ceeEEEEcH--HHHHHHHHHcCCCccCCCcEEEEEcCCCc---eecCCcccCCHHHHHHHHHHH
Confidence 222333577 899999854 35667788999974 3567877753221 222 22467777888887654
|
| >3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP} | Back alignment and structure |
|---|
Probab=98.56 E-value=2.1e-08 Score=115.79 Aligned_cols=74 Identities=19% Similarity=0.328 Sum_probs=61.4
Q ss_pred EEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc------cchhhHhHcCccccCCcEEEEcCCccccccCCCC
Q psy12972 876 HLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH------NEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSF 949 (1578)
Q Consensus 876 ~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~------~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~ 949 (1578)
.+|+||||||+||+++.|.|+++|++++ .|||+ +++++|++++|++ +||+++ +|+. +.|.+
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l~-------~Vd~d~~d~~~~~~~la~~~gI~~-vPT~~i--~G~~---~~G~~ 266 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQVP-------YVECSPNGPGTPQAQECTEAGITS-YPTWII--NGRT---YTGVR 266 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGSC-------EEESCSSCSSSCCCHHHHTTTCCS-TTEEEE--TTEE---EESCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHcC-------EEEEeecCchhhHHHHHHHcCCcc-cCeEEE--CCEE---ecCCC
Confidence 4799999999999999999999997763 45555 3789999999998 999554 8864 56999
Q ss_pred CHHHHHHHHHhhC
Q psy12972 950 SVQKMVEFFRLKL 962 (1578)
Q Consensus 950 s~~~L~~fi~~~l 962 (1578)
+.++|.+|+.-+.
T Consensus 267 ~~~~L~~~l~~~~ 279 (291)
T 3kp9_A 267 SLEALAVASGYPL 279 (291)
T ss_dssp CHHHHHHHTCCCC
T ss_pred CHHHHHHHHCCCC
Confidence 9999999986444
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=98.55 E-value=5.4e-08 Score=118.97 Aligned_cols=69 Identities=10% Similarity=0.068 Sum_probs=46.4
Q ss_pred eEEEEeccCCCcCCchhhHh------hcCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCch
Q psy12972 516 RVLTTEFIDGVKISDKEGLL------EKGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 516 ~VLVME~i~G~~l~d~~~l~------~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
.+++|+.. +.+|.++.... ...++...+...+.+++ +..+|..|++|||+||.|||+. .++++|||..
T Consensus 180 ~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a 258 (413)
T 3dzo_A 180 RFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHL 258 (413)
T ss_dssp EEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGC
T ss_pred eEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccce
Confidence 46777766 55777664311 11122233333334444 7889999999999999999965 5999999975
Q ss_pred h
Q psy12972 585 F 585 (1578)
Q Consensus 585 ~ 585 (1578)
.
T Consensus 259 ~ 259 (413)
T 3dzo_A 259 V 259 (413)
T ss_dssp E
T ss_pred e
Confidence 3
|
| >2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A | Back alignment and structure |
|---|
Probab=98.55 E-value=3e-08 Score=98.95 Aligned_cols=75 Identities=20% Similarity=0.293 Sum_probs=54.4
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC----Ccceeeeeecc--cCccccccCCcccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL----GVGFFTVHYDL--FGTTDGFSGQDSAS 822 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~----~vg~v~~~~~~--~~~~~~i~g~~~~~ 822 (1578)
.++..+|+..+. .++++++|.||||||+||+++.|.|+++++.+++. .+.++.++.+. ++.
T Consensus 11 ~l~~~~f~~~v~--~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~----------- 77 (121)
T 2djj_A 11 VVVAKNYNEIVL--DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPD----------- 77 (121)
T ss_dssp ECCTTTTTTSSS--CTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCSS-----------
T ss_pred EecccCHHHHhh--cCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccccccc-----------
Confidence 455667887764 36789999999999999999999999999999862 34444333322 222
Q ss_pred ccccccccCccccccccc
Q psy12972 823 RNFHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 823 ~~~~~i~~~Ptiklf~~~ 840 (1578)
.+..+||+.+|..+
T Consensus 78 ----~v~~~Pt~~~~~~~ 91 (121)
T 2djj_A 78 ----EIQGFPTIKLYPAG 91 (121)
T ss_dssp ----CCSSSSEEEEECSS
T ss_pred ----ccCcCCeEEEEeCc
Confidence 34455998888765
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=8.4e-08 Score=109.24 Aligned_cols=78 Identities=19% Similarity=0.167 Sum_probs=56.4
Q ss_pred ccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
.++.+|.++||++.. +|+.++||+.+++.... .-++++|++.
T Consensus 21 ~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~-------------------------------------~~~~~~E~~~ 62 (263)
T 3tm0_A 21 DTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGT-------------------------------------TYDVEREKDM 62 (263)
T ss_dssp CCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTS-------------------------------------TTCHHHHHHH
T ss_pred eccCCCCCeEEEEEC-CCCcEEEEeCCcccCCC-------------------------------------HHHHHHHHHH
Confidence 467788899999975 47899999998653210 0135788888
Q ss_pred HHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCch
Q psy12972 490 AERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDK 531 (1578)
Q Consensus 490 ~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~ 531 (1578)
++.++. .+.||+++.-. .+..+|||||++|.++.+.
T Consensus 63 l~~l~~------~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~ 100 (263)
T 3tm0_A 63 MLWLEG------KLPVPKVLHFERHDGWSNLLMSEADGVLCSEE 100 (263)
T ss_dssp HHHHTT------TSCCCCEEEEEEETTEEEEEEECCSSEEHHHH
T ss_pred HHHHhc------CCCCCeEEEEEecCCceEEEEEecCCeehhhc
Confidence 888753 26788887533 3456799999999998764
|
| >3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.55 E-value=1e-07 Score=97.77 Aligned_cols=86 Identities=14% Similarity=0.346 Sum_probs=70.5
Q ss_pred CCcEEEEEEcCCCcccccccHHHHH---HHHHhCCCceEEEEEECccchhh------------------------HhHcC
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKK---LMDELSPLGVGFFTVHVHNEQGL------------------------ARRLG 925 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~---lA~~l~~~~v~~a~VDc~~~~~L------------------------~~k~g 925 (1578)
.++++|.||++||++|+...|.+.+ +.+.+++.++.+..|+++.+.+. ++.|+
T Consensus 27 gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (142)
T 3ewl_A 27 AQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLYD 106 (142)
T ss_dssp CSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHcC
Confidence 6799999999999999999999988 88888766799999998865543 44899
Q ss_pred ccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 926 VGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 926 V~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|.+ +|+++++ ++|+... +..+.++|.+++++..
T Consensus 107 v~~-~P~~~lid~~G~i~~---~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 107 IRA-TPTIYLLDGRKRVIL---KDTSMEQLIDYLATQA 140 (142)
T ss_dssp CCS-SSEEEEECTTCBEEE---CSCCHHHHHHHHHC--
T ss_pred CCC-CCeEEEECCCCCEEe---cCCCHHHHHHHHHHHc
Confidence 997 9999999 6776644 4578899999987653
|
| >3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.54 E-value=1.4e-07 Score=101.57 Aligned_cols=89 Identities=12% Similarity=0.293 Sum_probs=75.5
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCce------EEEEEECcc-chhhHhHc---------------------
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGV------GFFTVHVHN-EQGLARRL--------------------- 924 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v------~~a~VDc~~-~~~L~~k~--------------------- 924 (1578)
.++++|.||++||++|+...|.+.++++.+++.++ .|..|+++. +.+.+++|
T Consensus 59 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 138 (183)
T 3lwa_A 59 NQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAAS 138 (183)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGGG
T ss_pred CCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHHH
Confidence 67999999999999999999999999999987667 999999988 66666666
Q ss_pred ----CccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 925 ----GVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 925 ----gV~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|.+ +|+++++ ++|+....+.|..+.++|.+++.+.+
T Consensus 139 ~~~~~v~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 180 (183)
T 3lwa_A 139 LGGVPASV-IPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLV 180 (183)
T ss_dssp TTTCCTTC-CSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHH
T ss_pred hccCCCCC-CCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 6887 9976665 78988777778889999999998754
|
| >3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15} | Back alignment and structure |
|---|
Probab=98.54 E-value=1.9e-07 Score=97.94 Aligned_cols=89 Identities=18% Similarity=0.372 Sum_probs=75.2
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc-------------------chhhHhHcCccccCCcE
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-------------------EQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~-------------------~~~L~~k~gV~~~~PTl 933 (1578)
.++++|.||++||++|+...|.+.++++.+.+.++.+..|+++. +.++++.|+|.+ +|++
T Consensus 41 gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-~P~~ 119 (158)
T 3hdc_A 41 GKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANR-LPDT 119 (158)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCS-SSEE
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCC-cceE
Confidence 57999999999999999999999999999987679999999987 678999999997 9997
Q ss_pred EEE-cCCccccccCCC--CCHHHHHHHHHhhC
Q psy12972 934 ALL-TDGRTSFFKEPS--FSVQKMVEFFRLKL 962 (1578)
Q Consensus 934 ~lf-~~G~~~~y~~G~--~s~~~L~~fi~~~l 962 (1578)
+++ ++|+....+.|. .+..++++.+.+..
T Consensus 120 ~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~ 151 (158)
T 3hdc_A 120 FIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLE 151 (158)
T ss_dssp EEECTTSBEEEEEESCCCTTSHHHHHHHHTTC
T ss_pred EEEcCCCCEEEEEeCCCccchHHHHHHHHhhc
Confidence 777 788877655564 44567777776554
|
| >3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15} | Back alignment and structure |
|---|
Probab=98.54 E-value=1.6e-07 Score=97.67 Aligned_cols=91 Identities=13% Similarity=0.315 Sum_probs=75.4
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccc-----------------------hhhHhHcCccc
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE-----------------------QGLARRLGVGS 928 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~-----------------------~~L~~k~gV~~ 928 (1578)
.+++++|.||++||++|+...|.+.++++.+.+.++.+..|+++.+ ..+++.|+|.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 3689999999999999999999999999999887799999999875 34899999997
Q ss_pred cCCcEEEE-cCCccccccCCCC--CHHHHHHHHHhhCC
Q psy12972 929 QLPQIALL-TDGRTSFFKEPSF--SVQKMVEFFRLKLP 963 (1578)
Q Consensus 929 ~~PTl~lf-~~G~~~~y~~G~~--s~~~L~~fi~~~lp 963 (1578)
+|+++++ ++|+....+.|.. +.+++.+++++...
T Consensus 107 -~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 107 -VPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp -BCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC--
T ss_pred -CCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHH
Confidence 9976666 7888776555654 66799999987653
|
| >3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=98.53 E-value=1.6e-07 Score=99.12 Aligned_cols=85 Identities=12% Similarity=0.381 Sum_probs=73.6
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc------------------cc-----------------
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH------------------NE----------------- 917 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~------------------~~----------------- 917 (1578)
.++++|.||++||++|+...|.+.++++.+. ++.|..|+++ ..
T Consensus 37 gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 37 GDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp SSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 5899999999999999999999999999998 5999999987 33
Q ss_pred -----hhhHhHcCccccCCcEEEE-cCCccccccCCCC-CHHHHHHHHHhhC
Q psy12972 918 -----QGLARRLGVGSQLPQIALL-TDGRTSFFKEPSF-SVQKMVEFFRLKL 962 (1578)
Q Consensus 918 -----~~L~~k~gV~~~~PTl~lf-~~G~~~~y~~G~~-s~~~L~~fi~~~l 962 (1578)
..+++.|+|.+ +|+++++ ++|+... .|.. +.+.|.+++++.+
T Consensus 115 ~~~d~~~~~~~~~v~~-~P~~~lid~~G~i~~--~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 115 MVMDDGSLVEKFNVRS-IDYIVIMDKSSNVLY--AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp EEECCSHHHHHTTCCS-SSEEEEEETTCCEEE--EEESCCHHHHHHHHHHC-
T ss_pred EEeChHHHHHHhCCCC-ceEEEEEcCCCcEEE--eCCCCCHHHHHHHHHHHh
Confidence 37899999997 9999999 6787665 5777 8899999987654
|
| >2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii} | Back alignment and structure |
|---|
Probab=98.53 E-value=1.4e-08 Score=105.84 Aligned_cols=74 Identities=15% Similarity=0.244 Sum_probs=56.1
Q ss_pred ccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccccccc
Q psy12972 753 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNFHNHM 829 (1578)
Q Consensus 753 ~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i~ 829 (1578)
.+|+..+.. +++++++|.|||+|||+|+.++|.++++|+++.+. +.++.+++|. ++..+++.+
T Consensus 30 ~~f~~~v~~-~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~-v~f~kVDVDe~~e~a~~y~V~s------------ 95 (160)
T 2av4_A 30 WAVDQAIVN-EDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF-CVIYLVDITEVPDFNTMYELYD------------ 95 (160)
T ss_dssp HHHHHHHHH-CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETTTCCTTTTTTTCCS------------
T ss_pred HHHHHHHHh-cCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC-cEEEEEECCCCHHHHHHcCCCC------------
Confidence 578888853 46789999999999999999999999999999754 3466666665 344444433
Q ss_pred cCcccccccccc
Q psy12972 830 YNPFDDVFSEGF 841 (1578)
Q Consensus 830 ~~Ptiklf~~~~ 841 (1578)
.||+.+|.+|-
T Consensus 96 -iPT~~fFk~G~ 106 (160)
T 2av4_A 96 -PVSVMFFYRNK 106 (160)
T ss_dssp -SEEEEEEETTE
T ss_pred -CCEEEEEECCE
Confidence 39988887664
|
| >3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.7e-07 Score=96.30 Aligned_cols=83 Identities=13% Similarity=0.224 Sum_probs=69.2
Q ss_pred CCcEEEEEEcCCCcccccccHHHHH---HHHHhCCCceEEEEEECccchh------------------------hHhHcC
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKK---LMDELSPLGVGFFTVHVHNEQG------------------------LARRLG 925 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~---lA~~l~~~~v~~a~VDc~~~~~------------------------L~~k~g 925 (1578)
.++++|.||++||++|+...|.+.+ +.+.+++.++.+..|+.+.+.+ +++.|+
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 5899999999999999999999999 9999977779999999877633 478899
Q ss_pred ccccCCcEEEE-cCCccccccCCCCCHHHHHHHHH
Q psy12972 926 VGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFR 959 (1578)
Q Consensus 926 V~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~ 959 (1578)
|.+ +|+++++ ++|+.+... .+.++|.+|++
T Consensus 111 v~~-~P~~~lid~~G~i~~~~---~~~~~l~~~l~ 141 (142)
T 3eur_A 111 LRA-IPTLYLLDKNKTVLLKD---ATLQKVEQYLA 141 (142)
T ss_dssp CTT-CSEEEEECTTCBEEEEE---ECHHHHHHHHH
T ss_pred CCc-CCeEEEECCCCcEEecC---CCHHHHHHHHh
Confidence 997 9999998 667665443 35688888875
|
| >2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.7e-07 Score=97.93 Aligned_cols=85 Identities=13% Similarity=0.160 Sum_probs=73.1
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchh-----------------------hHhHcCcccc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQG-----------------------LARRLGVGSQ 929 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~-----------------------L~~k~gV~~~ 929 (1578)
.++++|.||++||++|+...|.+.++++++++.++.+..|+++...+ +++.|+|.+
T Consensus 35 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~- 113 (152)
T 2lrt_A 35 GKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTN- 113 (152)
T ss_dssp GSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCS-
T ss_pred CCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCccc-
Confidence 57899999999999999999999999999987779999999987653 889999997
Q ss_pred CCcEEEE-cCCccccccCCCCCHHHHHHHH
Q psy12972 930 LPQIALL-TDGRTSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 930 ~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi 958 (1578)
+|+++++ ++|+....+.|..+.++...-.
T Consensus 114 ~P~~~lid~~G~i~~~~~g~~~~e~~~~~~ 143 (152)
T 2lrt_A 114 LPSVFLVNRNNELSARGENIKDLDEAIKKL 143 (152)
T ss_dssp CSEEEEEETTTEEEEETTTCSCHHHHHHHH
T ss_pred CceEEEECCCCeEEEecCCHHHHHHHHHHH
Confidence 9999999 7898887777877766655443
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=3.1e-08 Score=114.67 Aligned_cols=79 Identities=24% Similarity=0.388 Sum_probs=56.8
Q ss_pred ccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccc
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASR 823 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~ 823 (1578)
...++..+|+..+ ..+.+++++|.||||||+||+.+.|.|+++++++++. +.++.++++. +|...++.+
T Consensus 9 v~~~~~~~f~~~~-~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~------ 80 (287)
T 3qou_A 9 IVNINESNLQQVL-EQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ-FILAKLDCDAEQMIAAQFGLRA------ 80 (287)
T ss_dssp EEECCTTTHHHHH-TTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS-SEEEEEETTTCHHHHHTTTCCS------
T ss_pred cEECCHHHHHHHH-HhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC-eEEEEEeCccCHHHHHHcCCCC------
Confidence 3456677888844 5556899999999999999999999999999999863 3333333332 444444444
Q ss_pred cccccccCccccccccc
Q psy12972 824 NFHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 824 ~~~~i~~~Ptiklf~~~ 840 (1578)
.||+.+|..|
T Consensus 81 -------~Pt~~~~~~G 90 (287)
T 3qou_A 81 -------IPTVYLFQNG 90 (287)
T ss_dssp -------SSEEEEEETT
T ss_pred -------CCeEEEEECC
Confidence 4888887654
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=98.49 E-value=4e-08 Score=117.95 Aligned_cols=120 Identities=10% Similarity=-0.012 Sum_probs=44.8
Q ss_pred HHHhHHHHHHHHHHHHhcCcchh-hhhhhhhcCCCCCChhHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCChhhcccccc
Q psy12972 83 ASVHQRSANRILSMCLTNGGLYI-KLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFD 161 (1578)
Q Consensus 83 ~~~~~~~a~~l~~~~~~lgg~~i-K~GQ~ls~r~d~~p~~~~~~l~~Lqd~~p~~~~~~~~~~~~~~lg~~~~~~F~~f~ 161 (1578)
...+.+.|+++.+.+..+++..+ +++|.+...++..+ +++.++++|||++||.+.+++.+.++.+++.+..+.|.+|+
T Consensus 15 ~~~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (365)
T 2y7j_A 15 FNKERRRARREIRHLPNLNREQRRAFIRSLRDDPSQSA-NLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFY 93 (365)
T ss_dssp --------------------------------------------------------------------CBCHHHHHHHHH
T ss_pred chHHHHHHHHHHhcCccchhcccccccccccCCCchhH-HHHHHHHhhhhcCCCCccccccccCCchhhcccchhhhhhh
Confidence 45567889999999999999999 89999888877554 57778999999999999999999999999999988888888
Q ss_pred c-----cceeeeeeceeee-----CCCEEEEEEeCCCch-----------hhHHhhHHHHHhh
Q psy12972 162 E-----NPIAAASLAQSMV-----TDEALGIKLHEFHEA-----------TNERPDHEFHEAT 203 (1578)
Q Consensus 162 ~-----~PiasASi~QVh~-----~g~~vavKv~~p~v~-----------~~i~~Dl~~~~~~ 203 (1578)
. ++||+||.||||+ +|+.||||+.+|+.. +.+...+.++..+
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 156 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQV 156 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHh
Confidence 7 8999999999998 699999999999874 3445555566555
|
| >4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=98.49 E-value=3e-08 Score=96.68 Aligned_cols=72 Identities=8% Similarity=0.021 Sum_probs=46.6
Q ss_pred ccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc-cCccccccCCccccccccccccC
Q psy12972 753 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL-FGTTDGFSGQDSASRNFHNHMYN 831 (1578)
Q Consensus 753 ~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~-~~~~~~i~g~~~~~~~~~~i~~~ 831 (1578)
.+|++.+ +++++++|.||||||++|+++.|.|+++++.+.+..+..+++..+. ++...++. ..
T Consensus 9 ~~~~~~~---~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~-------------~~ 72 (105)
T 4euy_A 9 EELATYI---EEQQLVLLFIKTENCGVCDVMLRKVNYVLENYNYVEKIEILLQDMQEIAGRYAVF-------------TG 72 (105)
T ss_dssp -CCSSST---TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCTTEEEEEEEECCC---------C-------------CC
T ss_pred HHHHHHH---hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcCCceEEEEECCCCHHHHHhcCCC-------------CC
Confidence 4666666 4678999999999999999999999999999854333333332221 44444443 34
Q ss_pred ccccccccc
Q psy12972 832 PFDDVFSEG 840 (1578)
Q Consensus 832 Ptiklf~~~ 840 (1578)
||+.+|.+|
T Consensus 73 Pt~~~~~~G 81 (105)
T 4euy_A 73 PTVLLFYNG 81 (105)
T ss_dssp CEEEEEETT
T ss_pred CEEEEEeCC
Confidence 888787654
|
| >2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=98.48 E-value=6.8e-08 Score=98.14 Aligned_cols=77 Identities=19% Similarity=0.239 Sum_probs=55.2
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeecc---cCccccccCCcccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYDL---FGTTDGFSGQDSASRN 824 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~~---~~~~~~i~g~~~~~~~ 824 (1578)
.++..+|+..+.. ++++++|.||||||+||+++.|.|+++++.+++. .+.++.++.+. ++...
T Consensus 11 ~l~~~~~~~~~~~--~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~----------- 77 (133)
T 2dj3_A 11 VVVGKTFDAIVMD--PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQY----------- 77 (133)
T ss_dssp ECCTTTCCCCCTC--TTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSC-----------
T ss_pred EEcCCCHHHHhcc--CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhc-----------
Confidence 4556678887743 5789999999999999999999999999999853 45454443332 22222
Q ss_pred ccccccCccccccccc
Q psy12972 825 FHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 825 ~~~i~~~Ptiklf~~~ 840 (1578)
.+...||+.++..+
T Consensus 78 --~v~~~Pt~~~~~~g 91 (133)
T 2dj3_A 78 --KVEGFPTIYFAPSG 91 (133)
T ss_dssp --CCSSSSEEEEECTT
T ss_pred --CCCcCCEEEEEeCC
Confidence 34445898887754
|
| >1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10 | Back alignment and structure |
|---|
Probab=98.47 E-value=1.3e-07 Score=98.50 Aligned_cols=86 Identities=12% Similarity=0.329 Sum_probs=70.9
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc-----------------------cchhhHhHcCcccc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-----------------------NEQGLARRLGVGSQ 929 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~-----------------------~~~~L~~k~gV~~~ 929 (1578)
+++++|.||++||++|+...|.++++++. + ++.+..|+++ .+..+++.|+|.+
T Consensus 42 gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~- 117 (156)
T 1kng_A 42 GKVSLVNVWASWCVPCHDEAPLLTELGKD--K-RFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYG- 117 (156)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHTTC--T-TSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCS-
T ss_pred CCEEEEEEEcccCHhHHHHHHHHHHHHhc--C-CeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCc-
Confidence 67999999999999999999999998876 2 3788887753 3557899999997
Q ss_pred CCcEEEE-cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 930 LPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 930 ~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|+++++ ++|+....+.|..+.+++.+++.+.+
T Consensus 118 ~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l 151 (156)
T 1kng_A 118 VPETFVVGREGTIVYKLVGPITPDNLRSVLLPQM 151 (156)
T ss_dssp SCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHH
T ss_pred cCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHH
Confidence 9976666 78887776678889999998887654
|
| >2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.46 E-value=4.4e-08 Score=100.56 Aligned_cols=84 Identities=17% Similarity=0.253 Sum_probs=56.6
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|+..+. ...+++++|.||||||++|+++.|.|+++++.+++.++.++.++++. ++...++.+.
T Consensus 11 ~l~~~~f~~~~~-~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~------- 82 (137)
T 2dj0_A 11 YFNDKTIDEELE-RDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTS------- 82 (137)
T ss_dssp ECCTTHHHHHHH-HSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCC-------
T ss_pred EccHhhHHHHHh-cCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCccc-------
Confidence 345567777763 23455999999999999999999999999999986555554444332 3444444311
Q ss_pred cccccCccccccccc
Q psy12972 826 HNHMYNPFDDVFSEG 840 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~ 840 (1578)
..+...||+.+|.+|
T Consensus 83 ~~~~~~Pt~~~~~~G 97 (137)
T 2dj0_A 83 PLTKQLPTLILFQGG 97 (137)
T ss_dssp SSSSCSSEEEEESSS
T ss_pred CCcCCCCEEEEEECC
Confidence 112255998888655
|
| >2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=98.44 E-value=8e-08 Score=97.21 Aligned_cols=76 Identities=28% Similarity=0.435 Sum_probs=54.3
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|+..+. .++++++|.||||||++|+++.|.|+++++.+++. +.++.++.+. +|...++
T Consensus 21 ~l~~~~f~~~~~--~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~l~~~~~v---------- 87 (130)
T 2dml_A 21 ELTPSNFNREVI--QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV-VKVGAVNADKHQSLGGQYGV---------- 87 (130)
T ss_dssp ECCTTTHHHHTT--TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT-SEEEEEETTTCHHHHHHHTC----------
T ss_pred ECCHHHHHHHHh--cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc-eEEEEEeCCCCHHHHHHcCC----------
Confidence 456678888775 35789999999999999999999999999999863 3333333222 3333333
Q ss_pred cccccCccccccccc
Q psy12972 826 HNHMYNPFDDVFSEG 840 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~ 840 (1578)
...||+.+|..+
T Consensus 88 ---~~~Pt~~~~~~~ 99 (130)
T 2dml_A 88 ---QGFPTIKIFGAN 99 (130)
T ss_dssp ---CSSSEEEEESSC
T ss_pred ---CccCEEEEEeCC
Confidence 344888787754
|
| >1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A | Back alignment and structure |
|---|
Probab=98.44 E-value=3.4e-07 Score=94.22 Aligned_cols=71 Identities=13% Similarity=0.243 Sum_probs=61.5
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCC-CceEEEEEECccc------------------------hhhHhHcCcc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSP-LGVGFFTVHVHNE------------------------QGLARRLGVG 927 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~-~~v~~a~VDc~~~------------------------~~L~~k~gV~ 927 (1578)
.++++|.||++||++|+...|.+.++++.+++ .++.+..|+++.+ ..++++|+|.
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (144)
T 1i5g_A 28 GKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVK 107 (144)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCCC
Confidence 57899999999999999999999999999984 4589999998753 5799999999
Q ss_pred ccCCcEEEEc--CCccccc
Q psy12972 928 SQLPQIALLT--DGRTSFF 944 (1578)
Q Consensus 928 ~~~PTl~lf~--~G~~~~y 944 (1578)
+ +||++++. +|+.+..
T Consensus 108 ~-~P~~~lid~~~G~i~~~ 125 (144)
T 1i5g_A 108 S-IPTLVGVEADSGNIITT 125 (144)
T ss_dssp S-SSEEEEEETTTCCEEES
T ss_pred C-CCEEEEEECCCCcEEec
Confidence 7 99999995 7876543
|
| >2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=98.43 E-value=5.4e-08 Score=99.95 Aligned_cols=76 Identities=13% Similarity=0.095 Sum_probs=54.7
Q ss_pred cccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecccCccccccCCccccccccccc
Q psy12972 750 TTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDLFGTTDGFSGQDSASRNFHNHM 829 (1578)
Q Consensus 750 l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~~~~~~~i~g~~~~~~~~~~i~ 829 (1578)
++..+|...+...+.+++++|.||||||++|+.+.|.|+++|+.+.+ +.++.++.+..... ..+.
T Consensus 15 i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~--v~~~~vd~~~~~~~-------------~~i~ 79 (135)
T 2dbc_A 15 ISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPE--TKFVKAIVNSCIEH-------------YHDN 79 (135)
T ss_dssp CCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSS--EEEEEECCSSSCSS-------------CCSS
T ss_pred cCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--cEEEEEEhhcCccc-------------CCCC
Confidence 45667888886655568999999999999999999999999998853 44444443333222 2344
Q ss_pred cCccccccccc
Q psy12972 830 YNPFDDVFSEG 840 (1578)
Q Consensus 830 ~~Ptiklf~~~ 840 (1578)
..||+.+|..|
T Consensus 80 ~~Pt~~~~~~G 90 (135)
T 2dbc_A 80 CLPTIFVYKNG 90 (135)
T ss_dssp CCSEEEEESSS
T ss_pred CCCEEEEEECC
Confidence 45998887755
|
| >2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=98.42 E-value=2.2e-07 Score=100.89 Aligned_cols=88 Identities=16% Similarity=0.316 Sum_probs=75.1
Q ss_pred CcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc-----------------------------cchhhHhHc
Q psy12972 874 TPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-----------------------------NEQGLARRL 924 (1578)
Q Consensus 874 ~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~-----------------------------~~~~L~~k~ 924 (1578)
.+++|.||++||++|+...|.+.++.+++.+.++.+..|+++ .+..+++.|
T Consensus 47 ~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 126 (196)
T 2ywi_A 47 AATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAY 126 (196)
T ss_dssp SEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHH
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHh
Confidence 359999999999999999999999999998767999999983 456799999
Q ss_pred CccccCCcEEEE-cCCccccc---------cCCCCCHHHHHHHHHhhC
Q psy12972 925 GVGSQLPQIALL-TDGRTSFF---------KEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 925 gV~~~~PTl~lf-~~G~~~~y---------~~G~~s~~~L~~fi~~~l 962 (1578)
+|.+ +|+++++ ++|+.... +.|..+.++|.+.|++.+
T Consensus 127 ~v~~-~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll 173 (196)
T 2ywi_A 127 DAAC-TPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALL 173 (196)
T ss_dssp TCCE-ESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHH
T ss_pred CCCC-CCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHH
Confidence 9997 9999988 68876644 357778899999998765
|
| >3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.41 E-value=5.7e-07 Score=93.34 Aligned_cols=86 Identities=14% Similarity=0.281 Sum_probs=73.0
Q ss_pred CCcEEEEEEcCCCcc--cccccHHHHHHHHHh-CCCceEEEEEECccch-------------------------hhHhHc
Q psy12972 873 TTPHLILFYSDWCFA--CLQVEPIFKKLMDEL-SPLGVGFFTVHVHNEQ-------------------------GLARRL 924 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~--Ck~l~p~~~~lA~~l-~~~~v~~a~VDc~~~~-------------------------~L~~k~ 924 (1578)
.++++|.||++||++ |+...|.+.++.+.+ ++.++.+..|+++..+ .+++.|
T Consensus 33 gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 112 (150)
T 3fw2_A 33 QKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQY 112 (150)
T ss_dssp TSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHT
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHHc
Confidence 579999999999999 999999999999999 7777999999988654 789999
Q ss_pred CccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 925 GVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 925 gV~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|.+ +|+++++ ++|+....+ .+.+++.+.+++.+
T Consensus 113 ~v~~-~P~~~lid~~G~i~~~~---~~~~~l~~~l~~ll 147 (150)
T 3fw2_A 113 SIYK-IPANILLSSDGKILAKN---LRGEELKKKIENIV 147 (150)
T ss_dssp TCCS-SSEEEEECTTSBEEEES---CCHHHHHHHHHHHH
T ss_pred CCCc-cCeEEEECCCCEEEEcc---CCHHHHHHHHHHHH
Confidence 9997 9999999 788776554 26777877776543
|
| >1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A | Back alignment and structure |
|---|
Probab=98.41 E-value=4.4e-07 Score=93.72 Aligned_cols=70 Identities=17% Similarity=0.325 Sum_probs=61.0
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCC-CceEEEEEECccc------------------------hhhHhHcCcc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSP-LGVGFFTVHVHNE------------------------QGLARRLGVG 927 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~-~~v~~a~VDc~~~------------------------~~L~~k~gV~ 927 (1578)
+++++|.||++||++|+...|.+.++++.+++ .++.+..|+++.+ ..++++|+|.
T Consensus 28 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (146)
T 1o8x_A 28 GKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVE 107 (146)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCC
T ss_pred CCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCCC
Confidence 57899999999999999999999999999984 4589999988753 4799999999
Q ss_pred ccCCcEEEEc--CCcccc
Q psy12972 928 SQLPQIALLT--DGRTSF 943 (1578)
Q Consensus 928 ~~~PTl~lf~--~G~~~~ 943 (1578)
+ +||++++. +|+.+.
T Consensus 108 ~-~Pt~~lid~~~G~i~~ 124 (146)
T 1o8x_A 108 S-IPTLIGVDADSGDVVT 124 (146)
T ss_dssp S-SSEEEEEETTTCCEEE
T ss_pred C-CCEEEEEECCCCeEEE
Confidence 7 99999996 777654
|
| >2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.41 E-value=2.9e-07 Score=109.72 Aligned_cols=89 Identities=17% Similarity=0.171 Sum_probs=78.1
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc---------------------------chhhHhHcC
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN---------------------------EQGLARRLG 925 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~---------------------------~~~L~~k~g 925 (1578)
.++++|.||++||++|+...|.+.++++++++.++.+..|+++. +..+++.|+
T Consensus 82 GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~yg 161 (352)
T 2hyx_A 82 GKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYR 161 (352)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTT
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcC
Confidence 67999999999999999999999999999987679999998752 357999999
Q ss_pred ccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 926 VGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 926 V~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|.+ +|+++++ ++|++...+.|..+.++|.++|++.+
T Consensus 162 V~~-~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 162 NRY-WPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp CCE-ESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHH
T ss_pred CCc-cCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 998 9998888 88988777778888999999987665
|
| >2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A | Back alignment and structure |
|---|
Probab=98.39 E-value=9e-08 Score=94.52 Aligned_cols=74 Identities=20% Similarity=0.323 Sum_probs=52.9
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|++.+ ++++++|.||||||++|+++.|.|+++++.+++ ++.++.++.+. +++..+
T Consensus 5 ~l~~~~~~~~~----~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~----------- 68 (112)
T 2voc_A 5 KATDQSFSAET----SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDENQETAGKYG----------- 68 (112)
T ss_dssp ECCTTTHHHHH----SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTTCCSHHHHTT-----------
T ss_pred EecHHHHHHHh----CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCCCHHHHHHcC-----------
Confidence 45667788777 578999999999999999999999999999975 34444443332 333333
Q ss_pred cccccCccccccccc
Q psy12972 826 HNHMYNPFDDVFSEG 840 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~ 840 (1578)
+...|++.++.+|
T Consensus 69 --v~~~Pt~~~~~~G 81 (112)
T 2voc_A 69 --VMSIPTLLVLKDG 81 (112)
T ss_dssp --CCSBSEEEEEETT
T ss_pred --CCcccEEEEEeCC
Confidence 3344888777544
|
| >1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10 | Back alignment and structure |
|---|
Probab=98.39 E-value=7.1e-07 Score=96.14 Aligned_cols=91 Identities=13% Similarity=0.313 Sum_probs=75.0
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccc-----hhhHhHcCcc--------------------
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE-----QGLARRLGVG-------------------- 927 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~-----~~L~~k~gV~-------------------- 927 (1578)
.++++|.||++||++|+...|.+.++.+.+++.++.+..|+++.+ ...++++++.
T Consensus 60 gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 139 (186)
T 1jfu_A 60 GKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIG 139 (186)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTT
T ss_pred CCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhcccc
Confidence 578999999999999999999999999999866799999998765 4567777774
Q ss_pred ---ccCCcEEEE-cCCccccccCCCCC--HHHHHHHHHhhCCC
Q psy12972 928 ---SQLPQIALL-TDGRTSFFKEPSFS--VQKMVEFFRLKLPY 964 (1578)
Q Consensus 928 ---~~~PTl~lf-~~G~~~~y~~G~~s--~~~L~~fi~~~lp~ 964 (1578)
+ +|+++++ ++|+....+.|..+ .+++.+++++.+..
T Consensus 140 ~~~~-~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 140 RALG-MPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGK 181 (186)
T ss_dssp CCSS-SSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC-
T ss_pred ccCC-CCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhcc
Confidence 6 9999988 78887766667654 68899999877643
|
| >1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10 | Back alignment and structure |
|---|
Probab=98.38 E-value=4e-07 Score=93.55 Aligned_cols=71 Identities=15% Similarity=0.395 Sum_probs=61.1
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCC-CceEEEEEECccc------------------------hhhHhHcCcc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSP-LGVGFFTVHVHNE------------------------QGLARRLGVG 927 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~-~~v~~a~VDc~~~------------------------~~L~~k~gV~ 927 (1578)
+++++|.||++||++|+...|.+.++++.+++ .++.+..|+++.+ ..++++|+|.
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 107 (144)
T 1o73_A 28 GKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVE 107 (144)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCC
T ss_pred CCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCCC
Confidence 57899999999999999999999999999983 4588999988763 4689999999
Q ss_pred ccCCcEEEEc--CCccccc
Q psy12972 928 SQLPQIALLT--DGRTSFF 944 (1578)
Q Consensus 928 ~~~PTl~lf~--~G~~~~y 944 (1578)
+ +||++++. +|+....
T Consensus 108 ~-~Pt~~lid~~~G~i~~~ 125 (144)
T 1o73_A 108 S-IPTLITINADTGAIIGT 125 (144)
T ss_dssp S-SSEEEEEETTTCCEEES
T ss_pred C-CCEEEEEECCCCeEEec
Confidence 7 99999997 7766543
|
| >3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.37 E-value=4.7e-07 Score=96.15 Aligned_cols=70 Identities=20% Similarity=0.421 Sum_probs=61.4
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCC-CceEEEEEECccc------------------------hhhHhHcCcc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSP-LGVGFFTVHVHNE------------------------QGLARRLGVG 927 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~-~~v~~a~VDc~~~------------------------~~L~~k~gV~ 927 (1578)
.++++|.||++||++|+...|.+.++++.+++ .++.+..|+++.. ..+++.|+|.
T Consensus 48 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 127 (165)
T 3s9f_A 48 GKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVE 127 (165)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCC
Confidence 57899999999999999999999999999986 4688999988766 6899999999
Q ss_pred ccCCcEEEEc-C-Ccccc
Q psy12972 928 SQLPQIALLT-D-GRTSF 943 (1578)
Q Consensus 928 ~~~PTl~lf~-~-G~~~~ 943 (1578)
+ +||++++. + |+.+.
T Consensus 128 ~-~Pt~~lid~~~G~iv~ 144 (165)
T 3s9f_A 128 S-IPTLIGLNADTGDTVT 144 (165)
T ss_dssp S-SSEEEEEETTTCCEEE
T ss_pred C-CCEEEEEeCCCCEEEe
Confidence 7 99999996 4 76554
|
| >3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.37 E-value=6.9e-08 Score=95.00 Aligned_cols=75 Identities=16% Similarity=0.275 Sum_probs=50.2
Q ss_pred ccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccccccc
Q psy12972 753 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNFHNHM 829 (1578)
Q Consensus 753 ~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i~ 829 (1578)
.+|++.+.....+++++|.||||||++|+.+.|.|+++++.++..++.++.++.+. ++...++ .
T Consensus 9 ~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v-------------~ 75 (112)
T 3d6i_A 9 EQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEI-------------S 75 (112)
T ss_dssp HHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTC-------------C
T ss_pred HHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCC-------------C
Confidence 46666664335688999999999999999999999999999754445555444432 3333333 3
Q ss_pred cCccccccccc
Q psy12972 830 YNPFDDVFSEG 840 (1578)
Q Consensus 830 ~~Ptiklf~~~ 840 (1578)
..||+.++.+|
T Consensus 76 ~~Pt~~~~~~G 86 (112)
T 3d6i_A 76 AVPYFIIIHKG 86 (112)
T ss_dssp SSSEEEEEETT
T ss_pred cccEEEEEECC
Confidence 44887776544
|
| >3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.37 E-value=1.4e-06 Score=91.03 Aligned_cols=131 Identities=11% Similarity=0.109 Sum_probs=90.3
Q ss_pred hhcCCCCCCcccCchhhhhhcCCCCceEEEEEec-CCcchHHHHHHHHHHHhhccCCCCcEEEEEEec--CcchHHHHhc
Q psy12972 1070 TDNNPYLTLPRISSQSMLDAVCPVKKLCVVLFSE-DSPEHDASRHTLRRFAQESRFVHNNIAFMYVFI--EKQPEFVNAL 1146 (1578)
Q Consensus 1070 I~~nk~p~vpeLts~~~~~~~c~~~~lcVll~~~-~~~~~~~~~~~lr~vA~~~~~~~~~v~F~~vd~--~~q~~~~~~f 1146 (1578)
+..|++|+++++|..+........-.+.++++.. ++.+.+.+...++++|++ |+++ +.|+++|. +.+...++.|
T Consensus 8 ~~~~~~PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~--fkgk-i~Fv~vd~~~~~~~~~l~~f 84 (147)
T 3bj5_A 8 MKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAES--FKGK-ILFAFIDSDHTDNQRILEFF 84 (147)
T ss_dssp -------CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHT--TTTT-CEEEEECTTCGGGHHHHHHT
T ss_pred hhhccCCeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHH--cCCc-eEEEEEecchHhHHHHHHHc
Confidence 5678999999999888755542111344444543 345578899999999999 9887 89999998 6666777877
Q ss_pred cCCCCCCccccceeEEEEEcC--CcceEeeccCCcccccccccccHHHHHHHhhhhhcCCcccccccccccccccchhhh
Q psy12972 1147 TSPEDSSEISLHIAAMWRMDY--KKIKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTALKEISDEYIQS 1224 (1578)
Q Consensus 1147 ~~~~~~~~~~~~lp~l~~~n~--~~~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~~~l~~~~~lp~l~dE~~~~ 1224 (1578)
.... .++|++.+.+. ++.+|.+..+ ++|.+.|..|++.+++|... |.+.+|..|.
T Consensus 85 Gl~~------~~~P~v~i~~~~~~~~Ky~~~~~---------~~t~~~i~~Fv~d~l~GkL~--------p~~KSEpiPe 141 (147)
T 3bj5_A 85 GLKK------EECPAVRLITLEEEMTKYKPESE---------ELTAERITEFCHRFLEGKIK--------PHLMSQELPE 141 (147)
T ss_dssp TCCG------GGCSEEEEEECSSSCEEECCSCC---------CCCHHHHHHHHHHHHTTCSC--------EEECCSCCCG
T ss_pred CCCc------ccCCEEEEEecccccccCCCCcc---------cCCHHHHHHHHHHHHcCCcc--------ccccCCCCCC
Confidence 3222 36888877875 3478864323 36789999999999999998 7777777776
Q ss_pred hH
Q psy12972 1225 LG 1226 (1578)
Q Consensus 1225 ~~ 1226 (1578)
.|
T Consensus 142 ~w 143 (147)
T 3bj5_A 142 DW 143 (147)
T ss_dssp GG
T ss_pred Cc
Confidence 54
|
| >3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A | Back alignment and structure |
|---|
Probab=98.36 E-value=1e-07 Score=97.91 Aligned_cols=76 Identities=25% Similarity=0.398 Sum_probs=52.9
Q ss_pred ccccccccccccCCc---------cCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCcccccc
Q psy12972 749 STTHWNFEKNYIPKS---------YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFS 816 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~---------~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~ 816 (1578)
.++..+|+..+...+ .+++++|.||||||++|+.+.|.|+++++.+.+. +.++.++++. ++...++.
T Consensus 26 ~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~ 104 (141)
T 3hxs_A 26 HLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGK-IYIYKVNVDKEPELARDFGIQ 104 (141)
T ss_dssp ECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCC
T ss_pred cccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc-eEEEEEECCCCHHHHHHcCCC
Confidence 345556666665433 5789999999999999999999999999999853 3343333332 34444443
Q ss_pred CCccccccccccccCccccccc
Q psy12972 817 GQDSASRNFHNHMYNPFDDVFS 838 (1578)
Q Consensus 817 g~~~~~~~~~~i~~~Ptiklf~ 838 (1578)
..|++.++.
T Consensus 105 -------------~~Pt~~~~~ 113 (141)
T 3hxs_A 105 -------------SIPTIWFVP 113 (141)
T ss_dssp -------------SSSEEEEEC
T ss_pred -------------CcCEEEEEe
Confidence 448887774
|
| >3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A | Back alignment and structure |
|---|
Probab=98.34 E-value=9.9e-08 Score=92.44 Aligned_cols=74 Identities=19% Similarity=0.335 Sum_probs=53.5
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|+..+ ++++++|.||||||++|+.+.|.|+++++.+++. +.++.++.+. +++..++
T Consensus 7 ~l~~~~~~~~~----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v---------- 71 (106)
T 3die_A 7 KVTDADFDSKV----ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVDENPSTAAKYEV---------- 71 (106)
T ss_dssp ECCTTTHHHHS----CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTC----------
T ss_pred ECCHHHHHHHh----cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCcCHHHHHhCCC----------
Confidence 45667788877 6789999999999999999999999999999864 3333333332 3333333
Q ss_pred cccccCccccccccc
Q psy12972 826 HNHMYNPFDDVFSEG 840 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~ 840 (1578)
...|++.++.+|
T Consensus 72 ---~~~Pt~~~~~~G 83 (106)
T 3die_A 72 ---MSIPTLIVFKDG 83 (106)
T ss_dssp ---CSBSEEEEEETT
T ss_pred ---cccCEEEEEeCC
Confidence 334888777644
|
| >4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=98.33 E-value=8.6e-07 Score=91.20 Aligned_cols=83 Identities=10% Similarity=0.184 Sum_probs=67.9
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccc--------------------------hhhHhHcCc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE--------------------------QGLARRLGV 926 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~--------------------------~~L~~k~gV 926 (1578)
.++++|.||++||++|+...|.+.++.+.+++.++.+..|+++.+ ..+++.|+|
T Consensus 32 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 111 (143)
T 4fo5_A 32 GRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYDL 111 (143)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTTG
T ss_pred CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcCC
Confidence 578999999999999999999999999999877799999988743 257889999
Q ss_pred cccCCcEEEE-cCCccccccCCCCCHHHHHHHHH
Q psy12972 927 GSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFR 959 (1578)
Q Consensus 927 ~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~ 959 (1578)
.+ +|+.+++ ++|+..... ...+++.++++
T Consensus 112 ~~-~P~~~lid~~G~i~~~~---~~~~~l~~~l~ 141 (143)
T 4fo5_A 112 RK-GFKNFLINDEGVIIAAN---VTPEKLTEILK 141 (143)
T ss_dssp GG-CCCEEEECTTSBEEEES---CCHHHHHHHHT
T ss_pred CC-CCcEEEECCCCEEEEcc---CCHHHHHHHHH
Confidence 97 9998888 478765543 34567776664
|
| >2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A | Back alignment and structure |
|---|
Probab=98.33 E-value=9.3e-07 Score=95.45 Aligned_cols=89 Identities=11% Similarity=0.147 Sum_probs=73.2
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEEC-----------------------------ccchhhHhH
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV-----------------------------HNEQGLARR 923 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc-----------------------------~~~~~L~~k 923 (1578)
.++++|.||++||++|+...|.++++.+++.+. +.+..|++ +.+.++++.
T Consensus 33 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 33 EPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp SSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 589999999999999999999999999999887 99999998 335679999
Q ss_pred cCccccCCcEEEE-cCCccccc--------cCCCCCHHHHHHHHHhhCC
Q psy12972 924 LGVGSQLPQIALL-TDGRTSFF--------KEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 924 ~gV~~~~PTl~lf-~~G~~~~y--------~~G~~s~~~L~~fi~~~lp 963 (1578)
|+|.+ +|+++++ ++|+.... +.|..+.++|.+.|++.+.
T Consensus 112 ~~v~~-~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~ 159 (188)
T 2cvb_A 112 YRALR-TPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLR 159 (188)
T ss_dssp TTCCE-ESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHT
T ss_pred cCCCC-CCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHc
Confidence 99997 9999998 67876543 1123367788888877653
|
| >3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0 | Back alignment and structure |
|---|
Probab=98.33 E-value=8.8e-08 Score=93.73 Aligned_cols=77 Identities=19% Similarity=0.277 Sum_probs=54.3
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCcccccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRN 824 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~ 824 (1578)
..++..+|+..+.. ++++++|.||||||++|+.+.|.|+++++.+.+. +.++.++.+. ++...++
T Consensus 7 ~~l~~~~~~~~~~~--~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v--------- 74 (111)
T 3gnj_A 7 EKLDTNTFEQLIYD--EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEES-FGFYYVDVEEEKTLFQRFSL--------- 74 (111)
T ss_dssp EECCHHHHHHHHTT--SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTTCHHHHHHTTC---------
T ss_pred eecCHHHHHHHHHh--cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCc-eEEEEEECCcChhHHHhcCC---------
Confidence 34566678887743 4689999999999999999999999999999862 3333333332 3333343
Q ss_pred ccccccCccccccccc
Q psy12972 825 FHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 825 ~~~i~~~Ptiklf~~~ 840 (1578)
...|++.+|.+|
T Consensus 75 ----~~~Pt~~~~~~g 86 (111)
T 3gnj_A 75 ----KGVPQILYFKDG 86 (111)
T ss_dssp ----CSSCEEEEEETT
T ss_pred ----CcCCEEEEEECC
Confidence 344888777654
|
| >1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.33 E-value=8.3e-08 Score=97.27 Aligned_cols=77 Identities=23% Similarity=0.416 Sum_probs=53.7
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcC---CCcceeeeeecc---cCccccccCCcccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP---LGVGFFTVHYDL---FGTTDGFSGQDSAS 822 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~---~~vg~v~~~~~~---~~~~~~i~g~~~~~ 822 (1578)
.++..+|+..+.. ++++++|.||||||++|+++.|.|+++++.+++ ..+.++.++.+. +|...++
T Consensus 11 ~l~~~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v------- 81 (133)
T 1x5d_A 11 ELTDDSFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGI------- 81 (133)
T ss_dssp ECCTTHHHHHTTT--SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTC-------
T ss_pred EcCHhhHHHHHhc--CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCC-------
Confidence 4556678877753 468999999999999999999999999999972 234444333332 3333333
Q ss_pred ccccccccCccccccccc
Q psy12972 823 RNFHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 823 ~~~~~i~~~Ptiklf~~~ 840 (1578)
..+|++.+|..|
T Consensus 82 ------~~~Pt~~~~~~g 93 (133)
T 1x5d_A 82 ------RGFPTIKIFQKG 93 (133)
T ss_dssp ------CSSSEEEEEETT
T ss_pred ------CeeCeEEEEeCC
Confidence 344888777654
|
| >2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=98.32 E-value=1.3e-07 Score=96.95 Aligned_cols=77 Identities=18% Similarity=0.321 Sum_probs=54.2
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCC--cceeeeeecc---cCccccccCCcccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG--VGFFTVHYDL---FGTTDGFSGQDSAS 822 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~--vg~v~~~~~~---~~~~~~i~g~~~~~ 822 (1578)
..++..+|+..+. .+++++|.|||+||++|+++.|.|+++++.+++.+ +.++.++.+. +|...+
T Consensus 20 ~~l~~~~~~~~~~---~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~-------- 88 (140)
T 2dj1_A 20 WVLNDGNFDNFVA---DKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFD-------- 88 (140)
T ss_dssp EECCTTTHHHHHT---TCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTT--------
T ss_pred EEcChHhHHHHHh---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCC--------
Confidence 3456677887663 46899999999999999999999999999998753 4444443322 333333
Q ss_pred ccccccccCccccccccc
Q psy12972 823 RNFHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 823 ~~~~~i~~~Ptiklf~~~ 840 (1578)
+..+|++.+|..|
T Consensus 89 -----v~~~Pt~~~~~~G 101 (140)
T 2dj1_A 89 -----VSGYPTIKILKKG 101 (140)
T ss_dssp -----CCSSSEEEEEETT
T ss_pred -----CCccCeEEEEECC
Confidence 3445888777544
|
| >3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.32 E-value=9.2e-08 Score=95.60 Aligned_cols=76 Identities=20% Similarity=0.302 Sum_probs=53.3
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|.+.+.. ++++++|.||||||++|+++.|.|+++++.+++ ++.++.++.+. +|...++
T Consensus 7 ~l~~~~f~~~~~~--~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v---------- 73 (122)
T 3aps_A 7 DLTPQTFNEKVLQ--GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAYPQTCQKAGI---------- 73 (122)
T ss_dssp ECCHHHHHHHTTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHHHHHHTTC----------
T ss_pred cCCHHHHHHHHhc--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCCHHHHHHcCC----------
Confidence 4556677766653 578999999999999999999999999999985 34444333332 3333333
Q ss_pred cccccCccccccccc
Q psy12972 826 HNHMYNPFDDVFSEG 840 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~ 840 (1578)
...||+.++..+
T Consensus 74 ---~~~Pt~~~~~~~ 85 (122)
T 3aps_A 74 ---KAYPSVKLYQYE 85 (122)
T ss_dssp ---CSSSEEEEEEEE
T ss_pred ---CccceEEEEeCC
Confidence 344888777543
|
| >3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A | Back alignment and structure |
|---|
Probab=98.32 E-value=5.8e-07 Score=96.45 Aligned_cols=85 Identities=20% Similarity=0.353 Sum_probs=71.4
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEEC-----------------------ccchhhHhHcCcccc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV-----------------------HNEQGLARRLGVGSQ 929 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc-----------------------~~~~~L~~k~gV~~~ 929 (1578)
.++++|.||++||++|+...|.++++++. ++.+..|++ +.+..+++.|+|.+
T Consensus 58 gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~- 132 (176)
T 3kh7_A 58 GKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYG- 132 (176)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCS-
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCC-
Confidence 57999999999999999999999999886 477777774 34567899999997
Q ss_pred CCcEEEE-cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 930 LPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 930 ~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|+.+++ ++|+....+.|..+.+.+.+++.+.+
T Consensus 133 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 166 (176)
T 3kh7_A 133 APETYLIDKQGIIRHKIVGVVDQKVWREQLAPLY 166 (176)
T ss_dssp SCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHH
T ss_pred CCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 9987777 78888777778889999988887655
|
| >1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2 | Back alignment and structure |
|---|
Probab=98.32 E-value=1.6e-07 Score=92.96 Aligned_cols=76 Identities=20% Similarity=0.315 Sum_probs=53.4
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC--Ccceeeeeecc---cCccccccCCccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHYDL---FGTTDGFSGQDSASR 823 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~--~vg~v~~~~~~---~~~~~~i~g~~~~~~ 823 (1578)
.++..+|+..+ .++++++|.||||||++|+++.|.|+++++.+++. .+.++.++.+. +|...
T Consensus 11 ~l~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~---------- 77 (120)
T 1mek_A 11 VLRKSNFAEAL---AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQY---------- 77 (120)
T ss_dssp ECCTTTHHHHH---HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHH----------
T ss_pred EechhhHHHHH---ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHC----------
Confidence 45566777665 35789999999999999999999999999999864 34444443322 22333
Q ss_pred cccccccCccccccccc
Q psy12972 824 NFHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 824 ~~~~i~~~Ptiklf~~~ 840 (1578)
++...|++.++.+|
T Consensus 78 ---~v~~~Pt~~~~~~g 91 (120)
T 1mek_A 78 ---GVRGYPTIKFFRNG 91 (120)
T ss_dssp ---TCCSSSEEEEEESS
T ss_pred ---CCCcccEEEEEeCC
Confidence 34445888887655
|
| >3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=1e-07 Score=102.42 Aligned_cols=81 Identities=15% Similarity=0.103 Sum_probs=59.6
Q ss_pred ccccccccccccccCCccCccceecccc-------ccccccccchHHHHHHHHHhcC----CCcceeeeeecc---cCcc
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYS-------DWCFACLQVEPIFKKLMDELSP----LGVGFFTVHYDL---FGTT 812 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYA-------pwCghCk~LaP~weklA~~Lk~----~~vg~v~~~~~~---~~~~ 812 (1578)
.+.+++.||++.+ ....+.+++|.|+| +|||+|+.++|+|+++|+++.+ ..+.++.++++. +++.
T Consensus 20 vi~lt~~nF~~~v-~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la~~ 98 (178)
T 3ga4_A 20 VITVTADNYPLLS-RGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLVKD 98 (178)
T ss_dssp EEECCTTTHHHHT-TCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHHHH
T ss_pred CEECCHHHHHHHH-cccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHHHH
Confidence 3467888999766 34457789999999 4999999999999999999962 234455555443 4455
Q ss_pred ccccCCccccccccccccCcccccccccc
Q psy12972 813 DGFSGQDSASRNFHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 813 ~~i~g~~~~~~~~~~i~~~Ptiklf~~~~ 841 (1578)
.++++. ||+.+|+.|.
T Consensus 99 ~~I~si-------------Ptl~~F~~g~ 114 (178)
T 3ga4_A 99 LKLQNV-------------PHLVVYPPAE 114 (178)
T ss_dssp TTCCSS-------------CEEEEECCCC
T ss_pred cCCCCC-------------CEEEEEcCCC
Confidence 555544 9999999774
|
| >1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1 | Back alignment and structure |
|---|
Probab=98.31 E-value=6.7e-08 Score=94.37 Aligned_cols=72 Identities=17% Similarity=0.281 Sum_probs=49.7
Q ss_pred ccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccccccc
Q psy12972 753 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNFHNHM 829 (1578)
Q Consensus 753 ~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i~ 829 (1578)
.+|++.+.. .++++++|.||||||++|+++.|.|+++++.+.+ +.++.++.+. ++...+ +.
T Consensus 10 ~~~~~~~~~-~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~vd~~~~~~~~~~~~-------------v~ 73 (107)
T 1gh2_A 10 PDFQPELSG-AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQ--AVFLEVDVHQCQGTAATNN-------------IS 73 (107)
T ss_dssp GGHHHHHHH-TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTSHHHHHHTT-------------CC
T ss_pred HHHHHHHHh-CCCCEEEEEEECCCChhhHHHHHHHHHHHHHCCC--cEEEEEECccCHHHHHhcC-------------CC
Confidence 466665532 4678999999999999999999999999999853 3343333332 333333 34
Q ss_pred cCccccccccc
Q psy12972 830 YNPFDDVFSEG 840 (1578)
Q Consensus 830 ~~Ptiklf~~~ 840 (1578)
..||+.++.+|
T Consensus 74 ~~Pt~~~~~~G 84 (107)
T 1gh2_A 74 ATPTFQFFRNK 84 (107)
T ss_dssp SSSEEEEEETT
T ss_pred cccEEEEEECC
Confidence 44888777654
|
| >3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B | Back alignment and structure |
|---|
Probab=98.30 E-value=7.3e-08 Score=94.85 Aligned_cols=72 Identities=18% Similarity=0.333 Sum_probs=49.6
Q ss_pred ccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc-cCccccccCCccccccccccccC
Q psy12972 753 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL-FGTTDGFSGQDSASRNFHNHMYN 831 (1578)
Q Consensus 753 ~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~-~~~~~~i~g~~~~~~~~~~i~~~ 831 (1578)
.+|+..+ .++++++|.||||||++|+++.|.|+++++.+.+..+..+++.... ++...++. ..
T Consensus 15 ~~f~~~~---~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vd~~~~~~l~~~~~v~-------------~~ 78 (109)
T 3f3q_A 15 SEFDSAI---AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQKNEVS-------------AM 78 (109)
T ss_dssp HHHHHHT---TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCC-------------SS
T ss_pred HHHHHHH---hcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCC-------------cc
Confidence 4566665 3478999999999999999999999999999976443333332111 33333443 44
Q ss_pred ccccccccc
Q psy12972 832 PFDDVFSEG 840 (1578)
Q Consensus 832 Ptiklf~~~ 840 (1578)
||+.++..|
T Consensus 79 Pt~~~~~~G 87 (109)
T 3f3q_A 79 PTLLLFKNG 87 (109)
T ss_dssp SEEEEEETT
T ss_pred CEEEEEECC
Confidence 888777644
|
| >3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A | Back alignment and structure |
|---|
Probab=98.30 E-value=8.7e-08 Score=93.66 Aligned_cols=76 Identities=25% Similarity=0.394 Sum_probs=54.5
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC--Ccceeeeeecc---cCccccccCCcccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHYDL---FGTTDGFSGQDSAS 822 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~--~vg~v~~~~~~---~~~~~~i~g~~~~~ 822 (1578)
..++..+|++.+. +++++|.||||||++|+++.|.|+++++.+.+. ++.++.++.+. +|...++
T Consensus 8 ~~l~~~~~~~~~~----~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v------- 76 (111)
T 3uvt_A 8 LALTENNFDDTIA----EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSV------- 76 (111)
T ss_dssp EECCTTTHHHHHH----SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTC-------
T ss_pred eEcChhhHHHHhc----CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCC-------
Confidence 4566678888874 679999999999999999999999999998654 44444443332 3444444
Q ss_pred ccccccccCccccccccc
Q psy12972 823 RNFHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 823 ~~~~~i~~~Ptiklf~~~ 840 (1578)
...|++.++..|
T Consensus 77 ------~~~Pt~~~~~~g 88 (111)
T 3uvt_A 77 ------RGYPTLLLFRGG 88 (111)
T ss_dssp ------CSSSEEEEEETT
T ss_pred ------CcccEEEEEeCC
Confidence 344888777654
|
| >2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.29 E-value=2.3e-07 Score=94.25 Aligned_cols=76 Identities=20% Similarity=0.351 Sum_probs=53.8
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|+..+. +++++++|.||||||++|+++.|.|+++++.+++. +.++.++.+. +++..++
T Consensus 26 ~l~~~~f~~~~~--~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~~~~~~l~~~~~v---------- 92 (128)
T 2o8v_B 26 HLTDDSFDTDVL--KADGAILVDFWAEWCGPAKMIAPILDEIADEYQGK-LTVAKLNIDQNPGTAPKYGI---------- 92 (128)
T ss_dssp EECTTTHHHHTT--TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTT-EEEEEEETTTCCTTSGGGTC----------
T ss_pred ecChhhHHHHHH--hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEECCCCHHHHHHcCC----------
Confidence 456678887764 46789999999999999999999999999999753 4343333332 3344333
Q ss_pred cccccCccccccccc
Q psy12972 826 HNHMYNPFDDVFSEG 840 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~ 840 (1578)
...||+.++.+|
T Consensus 93 ---~~~Pt~~~~~~G 104 (128)
T 2o8v_B 93 ---RGIPTLLLFKNG 104 (128)
T ss_dssp ---CSSSEEEEEETT
T ss_pred ---CccCEEEEEeCC
Confidence 344888777544
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=98.28 E-value=1.3e-06 Score=101.24 Aligned_cols=96 Identities=16% Similarity=0.062 Sum_probs=73.5
Q ss_pred hHHHHHHHHhCCChhhhccccCCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCC
Q psy12972 386 EVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFD 465 (1578)
Q Consensus 386 ~v~~~~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~ 465 (1578)
.|.+.+.+.+|.++..+ +++|.|..++||+.++.||+.|+||+..++.... .
T Consensus 4 ~v~a~~~~l~G~~v~~v------~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~---------------------~- 55 (288)
T 3f7w_A 4 SVAARVTELTGREVAAV------AERGHSHRWHLYRVELADGTPLFVKALPDDAPAL---------------------D- 55 (288)
T ss_dssp HHHHHHHHHHCCCEEEE------EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCC---------------------T-
T ss_pred HHHHHHHHhcCCCeEEE------EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcch---------------------h-
Confidence 45566778899887665 8999999999999999999999999876553210 0
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCc
Q psy12972 466 FQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISD 530 (1578)
Q Consensus 466 ~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d 530 (1578)
-.|+.|++.++.+++ ...|.||+++. .....++|||++|.....
T Consensus 56 ---------------~~~~~Ea~~L~~L~~----~~~vpvP~v~~--~~~~~lv~e~l~~~~~~~ 99 (288)
T 3f7w_A 56 ---------------GLFRAEALGLDWLGR----SFGSPVPQVAG--WDDRTLAMEWVDERPPTP 99 (288)
T ss_dssp ---------------THHHHHHHHHHHHTC----STTCCSCCEEE--EETTEEEEECCCCCCCCH
T ss_pred ---------------hHHHHHHHHHHHHHh----hCCCCcceEEe--ccCceEEEEeecccCCCh
Confidence 014678888877753 34588999985 356789999999887764
|
| >2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=98.28 E-value=1.4e-07 Score=96.81 Aligned_cols=77 Identities=9% Similarity=0.006 Sum_probs=59.5
Q ss_pred ccccccccccccCCccCccceeccccccc--cccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWC--FACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASR 823 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwC--ghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~ 823 (1578)
.+++.||+..+. +++++++|.|||+|| |+|+.++|..+++++++.+. +.++.++++. ++..+++.+.
T Consensus 19 ~vt~~~F~~~v~--~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~-v~~~KVdvDe~~~la~~ygV~si----- 90 (137)
T 2qsi_A 19 LVDEATVDDFIA--HSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR-LVAAEVAAEAERGLMARFGVAVC----- 90 (137)
T ss_dssp EECTTTHHHHHH--TSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT-EEEEEECGGGHHHHHHHHTCCSS-----
T ss_pred ccCHhHHHHHHh--cCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC-cEEEEEECCCCHHHHHHcCCccC-----
Confidence 456678888884 345699999999999 99999999999999999753 4455555554 5566666655
Q ss_pred cccccccCcccccccccc
Q psy12972 824 NFHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 824 ~~~~i~~~Ptiklf~~~~ 841 (1578)
||+.+|++|-
T Consensus 91 --------PTlilFkdG~ 100 (137)
T 2qsi_A 91 --------PSLAVVQPER 100 (137)
T ss_dssp --------SEEEEEECCE
T ss_pred --------CEEEEEECCE
Confidence 9999999774
|
| >2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A | Back alignment and structure |
|---|
Probab=98.27 E-value=1.1e-07 Score=97.87 Aligned_cols=77 Identities=14% Similarity=0.119 Sum_probs=61.1
Q ss_pred ccccccccccccCCccCccceecccccc--ccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDW--CFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASR 823 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApw--CghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~ 823 (1578)
.+++.+|++.+ .+++++||.|||+| ||+|+.++|..+++|+++.+..+.++.+++|. ++..+++.+.
T Consensus 21 ~~t~~~F~~~v---~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sI----- 92 (140)
T 2qgv_A 21 PVSESRLDDWL---TQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRF----- 92 (140)
T ss_dssp ECCHHHHHHHH---HTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSS-----
T ss_pred cCCHHHHHHHH---hCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccC-----
Confidence 45667888888 26778999999999 99999999999999999976535555555554 5666666665
Q ss_pred cccccccCcccccccccc
Q psy12972 824 NFHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 824 ~~~~i~~~Ptiklf~~~~ 841 (1578)
||+.+|++|-
T Consensus 93 --------PTlilFk~G~ 102 (140)
T 2qgv_A 93 --------PATLVFTGGN 102 (140)
T ss_dssp --------SEEEEEETTE
T ss_pred --------CEEEEEECCE
Confidence 9999999774
|
| >1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.5e-07 Score=94.77 Aligned_cols=75 Identities=20% Similarity=0.244 Sum_probs=52.1
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCcccccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRN 824 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~ 824 (1578)
..++..+|++.+. +.++|.||||||++|+++.|.|+++++.+++.++.++.++++. ++...++
T Consensus 10 ~~l~~~~f~~~~~-----~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v--------- 75 (126)
T 1x5e_A 10 RVITDENWRELLE-----GDWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFII--------- 75 (126)
T ss_dssp EECCTTTHHHHTS-----SEEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTC---------
T ss_pred EEecHHHHHHHhC-----CCEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCC---------
Confidence 3456677876552 2399999999999999999999999999986445454444332 3333333
Q ss_pred ccccccCccccccccc
Q psy12972 825 FHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 825 ~~~i~~~Ptiklf~~~ 840 (1578)
...||+.++.+|
T Consensus 76 ----~~~Pt~~~~~~G 87 (126)
T 1x5e_A 76 ----NALPTIYHCKDG 87 (126)
T ss_dssp ----CSSSEEEEEETT
T ss_pred ----cccCEEEEEeCC
Confidence 344888777554
|
| >2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.7e-07 Score=96.02 Aligned_cols=75 Identities=23% Similarity=0.361 Sum_probs=52.3
Q ss_pred ccccccccccccCCc---------cCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCcccccc
Q psy12972 749 STTHWNFEKNYIPKS---------YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFS 816 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~---------~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~ 816 (1578)
.++..+|.+.+...+ ++++++|.||||||++|+++.|.|+++++.+++. +.++.++++. ++...++
T Consensus 13 ~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~~~~l~~~~~v- 90 (136)
T 2l5l_A 13 HLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ-IVIYKVDTEKEQELAGAFGI- 90 (136)
T ss_dssp EECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTC-
T ss_pred EecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-EEEEEEeCCCCHHHHHHcCC-
Confidence 455667777775432 5789999999999999999999999999999753 3333333322 3333333
Q ss_pred CCccccccccccccCcccccc
Q psy12972 817 GQDSASRNFHNHMYNPFDDVF 837 (1578)
Q Consensus 817 g~~~~~~~~~~i~~~Ptiklf 837 (1578)
...|++.++
T Consensus 91 ------------~~~Pt~~~~ 99 (136)
T 2l5l_A 91 ------------RSIPSILFI 99 (136)
T ss_dssp ------------CSSCEEEEE
T ss_pred ------------CCCCEEEEE
Confidence 344888777
|
| >1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=98.26 E-value=2e-07 Score=91.55 Aligned_cols=76 Identities=24% Similarity=0.479 Sum_probs=53.5
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|...+.. ++++++|.||||||++|+++.|.|+++++.+++. +.++.++.+. ++...++
T Consensus 9 ~l~~~~~~~~~~~--~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v---------- 75 (112)
T 1t00_A 9 HVTDDSFEQDVLK--NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK-IEIVKLNIDENPGTAAKYGV---------- 75 (112)
T ss_dssp EECTTTHHHHTTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTC----------
T ss_pred ecchhhHHHHHhh--CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCC-eEEEEEEcCCCHHHHHhCCC----------
Confidence 4566678777753 5789999999999999999999999999999653 4444443332 3333333
Q ss_pred cccccCccccccccc
Q psy12972 826 HNHMYNPFDDVFSEG 840 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~ 840 (1578)
...|++.++.+|
T Consensus 76 ---~~~Pt~~~~~~G 87 (112)
T 1t00_A 76 ---MSIPTLNVYQGG 87 (112)
T ss_dssp ---CSSSEEEEEETT
T ss_pred ---CcccEEEEEeCC
Confidence 344887666544
|
| >3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157} | Back alignment and structure |
|---|
Probab=98.26 E-value=2.5e-07 Score=103.27 Aligned_cols=76 Identities=21% Similarity=0.396 Sum_probs=54.7
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|+..+++ ++++++|.||||||++|+.+.|.|+++++.+++. +.++.++++. +|...++
T Consensus 16 ~lt~~~f~~~v~~--~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~~~~l~~~~~v---------- 82 (222)
T 3dxb_A 16 HLTDDSFDTDVLK--ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQNPGTAPKYGI---------- 82 (222)
T ss_dssp ECCTTTHHHHHTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCTTTGGGGTC----------
T ss_pred eCCHHHHHHHHHh--cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCCCHHHHHHcCC----------
Confidence 4666788887654 6789999999999999999999999999999864 3333333332 3344333
Q ss_pred cccccCccccccccc
Q psy12972 826 HNHMYNPFDDVFSEG 840 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~ 840 (1578)
...||+.+++.|
T Consensus 83 ---~~~Pt~~~~~~G 94 (222)
T 3dxb_A 83 ---RGIPTLLLFKNG 94 (222)
T ss_dssp ---CSBSEEEEEETT
T ss_pred ---CcCCEEEEEECC
Confidence 344888777644
|
| >2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ... | Back alignment and structure |
|---|
Probab=98.26 E-value=2.1e-07 Score=90.72 Aligned_cols=76 Identities=21% Similarity=0.385 Sum_probs=53.2
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|+..+. +++++++|.||||||++|+.+.|.++++++.+++. +.++.++.+. +++..+
T Consensus 6 ~l~~~~f~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~----------- 71 (108)
T 2trx_A 6 HLTDDSFDTDVL--KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQNPGTAPKYG----------- 71 (108)
T ss_dssp ECCTTTHHHHTT--TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTTCTTHHHHTT-----------
T ss_pred ecchhhHHHHHH--hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-cEEEEEECCCCHHHHHHcC-----------
Confidence 456667887764 46789999999999999999999999999998753 4443333322 233333
Q ss_pred cccccCccccccccc
Q psy12972 826 HNHMYNPFDDVFSEG 840 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~ 840 (1578)
+...|++.++.+|
T Consensus 72 --v~~~Pt~~~~~~G 84 (108)
T 2trx_A 72 --IRGIPTLLLFKNG 84 (108)
T ss_dssp --CCSSSEEEEEETT
T ss_pred --CcccCEEEEEeCC
Confidence 3444888777544
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1578 | ||||
| d1hdja_ | 77 | a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9 | 5e-19 | |
| d1xbla_ | 75 | a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain | 2e-17 | |
| d1wjza_ | 94 | a.2.3.1 (A:) CSL-type zinc finger-containing prote | 4e-16 | |
| d1fafa_ | 79 | a.2.3.1 (A:) Large T antigen, the N-terminal J dom | 6e-15 | |
| d1fpoa1 | 76 | a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma | 3e-14 | |
| d1gh6a_ | 114 | a.2.3.1 (A:) Large T antigen, the N-terminal J dom | 6e-14 | |
| d1nz6a_ | 98 | a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T | 5e-13 | |
| d1iura_ | 88 | a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human | 7e-11 | |
| d1twfh_ | 145 | b.40.4.8 (H:) RNA polymerase subunit RBP8 {Baker's | 1e-09 | |
| d2es7a1 | 119 | c.47.1.20 (A:7-125) Hydrogenase-1 operon protein H | 2e-04 | |
| d2hfda1 | 132 | c.47.1.20 (A:1-132) Hydrogenase-1 operon protein H | 0.001 |
| >d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Long alpha-hairpin superfamily: Chaperone J-domain family: Chaperone J-domain domain: HSP40 species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.5 bits (198), Expect = 5e-19
Identities = 33/72 (45%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697
D Y+TLG+ R AS +EI++ Y+R + +HPDKN +P A+EKF ++ EAY++LSD +R+
Sbjct: 4 DYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREI 63
Query: 698 YDLFGTTDGFSG 709
+D +G +G G
Sbjct: 64 FDRYG-EEGLKG 74
|
| >d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Long alpha-hairpin superfamily: Chaperone J-domain family: Chaperone J-domain domain: DnaJ chaperone, N-terminal (J) domain species: Escherichia coli [TaxId: 562]
Score = 76.2 bits (187), Expect = 2e-17
Identities = 33/66 (50%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNILSDAERRK 696
D YE LGV +TA +EIRK YKRL +++HPD+N D A+ KF ++ EAY +L+D+++R
Sbjct: 4 DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRA 63
Query: 697 QYDLFG 702
YD +G
Sbjct: 64 AYDQYG 69
|
| >d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Long alpha-hairpin superfamily: Chaperone J-domain family: Chaperone J-domain domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 73.2 bits (179), Expect = 4e-16
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEK-------FLQLTEAYNILS 690
D Y LG +A++ ++++ Y++L++ +HPDK + F+++ +A+ IL
Sbjct: 17 DWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILG 76
Query: 691 DAERRKQYDLFGTTDGFSG 709
+ E +K+YDL + SG
Sbjct: 77 NEETKKKYDLQR-SGPSSG 94
|
| >d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Long alpha-hairpin superfamily: Chaperone J-domain family: Chaperone J-domain domain: Large T antigen, the N-terminal J domain species: Murine polyomavirus [TaxId: 10634]
Score = 69.3 bits (169), Expect = 6e-15
Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 5/71 (7%)
Query: 636 SLDPYETLGVPRTA--SLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAE 693
E L +PR +++ YK+ + HPDK +L +
Sbjct: 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS---HALMQELNSLWGTFKTEV 66
Query: 694 RRKQYDLFGTT 704
+ +L GT
Sbjct: 67 YNLRMNLGGTG 77
|
| >d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Long alpha-hairpin superfamily: Chaperone J-domain family: Chaperone J-domain domain: HSC20 (HSCB), N-terminal (J) domain species: Escherichia coli [TaxId: 562]
Score = 67.0 bits (163), Expect = 3e-14
Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Query: 637 LDPYETLGVPRTASL--QEIRKNYKRLVVEWHPDKNNDPTAQEK------FLQLTEAYNI 688
+D + G+P L Q + ++ L ++HPDK + E+ + +A+
Sbjct: 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQT 60
Query: 689 LSDAERRKQYDL 700
L R +Y L
Sbjct: 61 LRHPLMRAEYLL 72
|
| >d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Long alpha-hairpin superfamily: Chaperone J-domain family: Chaperone J-domain domain: Large T antigen, the N-terminal J domain species: Simian virus 40, Sv40 [TaxId: 10633]
Score = 67.5 bits (164), Expect = 6e-14
Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 7/110 (6%)
Query: 636 SLDPYETLGVPRTA--SLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAE 693
SL + LG+ R+A ++ +RK Y + E+HPDK D +K Y + D
Sbjct: 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKM---NTLYKKMEDGV 63
Query: 694 RRKQYDLFGTTDGFSGQDSASRNFHNHMYNPF--DDVFSEGFNFPFEEHD 741
+ FG + + + +N F +++F ++
Sbjct: 64 KYAHQPDFGGFWDATEIPTYGTDEWEQWWNAFNEENLFCSEEMPSSDDEA 113
|
| >d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Long alpha-hairpin superfamily: Chaperone J-domain family: Chaperone J-domain domain: Auxilin J-domain species: Cow (Bos taurus) [TaxId: 9913]
Score = 64.2 bits (156), Expect = 5e-13
Identities = 12/65 (18%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQ----EKFLQLTEAYNILSDAE 693
++ +G+ + ++++K Y++ V+ HPDK + F++L +A++ +
Sbjct: 34 TKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQG 93
Query: 694 RRKQY 698
++ Y
Sbjct: 94 QKPLY 98
|
| >d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Long alpha-hairpin superfamily: Chaperone J-domain family: Chaperone J-domain domain: Hypothetical protein KIAA0730 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.8 bits (139), Expect = 7e-11
Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTA--QEKFLQLTEAYNILSDAERR 695
+ + E +K +RL ++WHPDKN + E F L N L
Sbjct: 17 EVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76
Query: 696 KQYD 699
Q
Sbjct: 77 DQNA 80
|
| >d1twfh_ b.40.4.8 (H:) RNA polymerase subunit RBP8 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 145 | Back information, alignment and structure |
|---|
class: All beta proteins fold: OB-fold superfamily: Nucleic acid-binding proteins family: RNA polymerase subunit RBP8 domain: RNA polymerase subunit RBP8 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 56.3 bits (136), Expect = 1e-09
Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 13/76 (17%)
Query: 534 LLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHSGN------DVNTWLYPVDLGDKFRL 587
L + F +++VD + + + A + + D+N L+PV D +
Sbjct: 4 LFDDIFQVSEVDPGRY-------NKVCRIEAASTTQDQCKLTLDINVELFPVAAQDSLTV 56
Query: 588 VLATTLREDGYPDSGE 603
+A++L + P +
Sbjct: 57 TIASSLNLEDTPANDS 72
|
| >d2es7a1 c.47.1.20 (A:7-125) Hydrogenase-1 operon protein HyaE {Salmonella typhimurium [TaxId: 90371]} Length = 119 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: HyaE-like domain: Hydrogenase-1 operon protein HyaE species: Salmonella typhimurium [TaxId: 90371]
Score = 40.4 bits (94), Expect = 2e-04
Identities = 6/68 (8%), Positives = 17/68 (25%)
Query: 866 NYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLG 925
++I + L+ + +L+ E + + + R
Sbjct: 23 DWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREFPQFDWQVAVADLEQSEAIGDRFN 82
Query: 926 VGSQLPQI 933
V +
Sbjct: 83 VRRFPATL 90
|
| >d2hfda1 c.47.1.20 (A:1-132) Hydrogenase-1 operon protein HyaE {Escherichia coli [TaxId: 562]} Length = 132 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: HyaE-like domain: Hydrogenase-1 operon protein HyaE species: Escherichia coli [TaxId: 562]
Score = 38.9 bits (90), Expect = 0.001
Identities = 6/61 (9%), Positives = 14/61 (22%)
Query: 875 PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934
L+ + +L+ E + + + R GV +
Sbjct: 38 VVLLSSDPKRTPEVSDNPVMIGELLREFPDYTWQVAIADLEQSEAIGDRFGVFRFPATLV 97
Query: 935 L 935
Sbjct: 98 F 98
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1578 | |||
| d2b5ea4 | 119 | Protein disulfide isomerase, PDI {Baker's yeast (S | 99.72 | |
| d1thxa_ | 108 | Thioredoxin {Anabaena sp., pcc 7120 [TaxId: 1167]} | 99.71 | |
| d1fb6a_ | 104 | Thioredoxin {Spinach (Spinacia oleracea), thioredo | 99.7 | |
| d1nw2a_ | 105 | Thioredoxin {Alicyclobacillus acidocaldarius, form | 99.69 | |
| d2trxa_ | 108 | Thioredoxin {Escherichia coli [TaxId: 562]} | 99.69 | |
| d1dbya_ | 107 | Thioredoxin {Chlamydomonas reinhardtii [TaxId: 305 | 99.69 | |
| d1a8ya1 | 124 | Calsequestrin {Rabbit (Oryctolagus cuniculus) [Tax | 99.68 | |
| d1meka_ | 120 | Protein disulfide isomerase, PDI {Human (Homo sapi | 99.67 | |
| d1xbla_ | 75 | DnaJ chaperone, N-terminal (J) domain {Escherichia | 99.62 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.62 | |
| d2c0ga2 | 122 | Windbeutel, N-terminal domain {Fruit fly (Drosophi | 99.6 | |
| d2djja1 | 116 | Protein disulfide isomerase, PDI {Fungi (Humicola | 99.59 | |
| d1hdja_ | 77 | HSP40 {Human (Homo sapiens) [TaxId: 9606]} | 99.58 | |
| d2b5ea1 | 140 | Protein disulfide isomerase, PDI {Baker's yeast (S | 99.57 | |
| d1ep7a_ | 112 | Thioredoxin {Chlamydomonas reinhardtii [TaxId: 305 | 99.57 | |
| d1f9ma_ | 112 | Thioredoxin {Spinach (Spinacia oleracea), thioredo | 99.55 | |
| d2ifqa1 | 105 | Thioredoxin {Human (Homo sapiens) [TaxId: 9606]} | 99.51 | |
| d1syra_ | 103 | Thioredoxin {Malarial parasite (Plasmodium falcipa | 99.51 | |
| d1gh2a_ | 107 | Thioredoxin-like protein, N-terminal domain {Human | 99.5 | |
| d1xwaa_ | 111 | Thioredoxin {Fruit fly (Drosophila melanogaster) [ | 99.5 | |
| d1xfla_ | 114 | Thioredoxin {Thale cress (Arabidopsis thaliana) [T | 99.5 | |
| d1ti3a_ | 113 | Thioredoxin {European aspen (Populus tremula), thi | 99.49 | |
| d1gh6a_ | 114 | Large T antigen, the N-terminal J domain {Simian v | 99.49 | |
| d1g7ea_ | 122 | Endoplasmic reticulum protein ERP29, N-terminal do | 99.48 | |
| d2hfda1 | 132 | Hydrogenase-1 operon protein HyaE {Escherichia col | 99.48 | |
| d1r26a_ | 113 | Thioredoxin {Trypanosoma brucei [TaxId: 5691]} | 99.47 | |
| d1wjza_ | 94 | CSL-type zinc finger-containing protein 3 (J-domai | 99.46 | |
| d1fo5a_ | 85 | MJ0307, thioredoxin/glutaredoxin-like protein {Arc | 99.45 | |
| d2es7a1 | 119 | Hydrogenase-1 operon protein HyaE {Salmonella typh | 99.44 | |
| d1a8la2 | 107 | Protein disulfide isomerase, PDI {Archaeon Pyrococ | 99.43 | |
| d1qgva_ | 137 | spliceosomal protein U5-15Kd {Human (Homo sapiens) | 99.42 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 99.37 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 99.35 | |
| d1nhoa_ | 85 | MTH807, thioredoxin/glutaredoxin-like protein {Arc | 99.34 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 99.34 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 99.34 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 99.33 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 99.33 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 99.33 | |
| d1fafa_ | 79 | Large T antigen, the N-terminal J domain {Murine p | 99.32 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 99.32 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 99.32 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 99.31 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 99.3 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 99.3 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 99.3 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 99.29 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 99.29 | |
| d1zmaa1 | 115 | Bacterocin transport accessory protein Bta {Strept | 99.29 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 99.29 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 99.27 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 99.26 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 99.26 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.26 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.26 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 99.25 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.25 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 99.24 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 99.24 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 99.24 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 99.23 | |
| d1fpoa1 | 76 | HSC20 (HSCB), N-terminal (J) domain {Escherichia c | 99.23 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 99.22 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 99.22 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 99.22 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 99.22 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 99.21 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 99.19 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 99.19 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 99.18 | |
| d1hyua4 | 96 | Alkyl hydroperoxide reductase subunit F (AhpF), N- | 99.18 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 99.17 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 99.17 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 99.16 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 99.16 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 99.16 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 99.15 | |
| d1woua_ | 119 | Putative 42-9-9 protein (thioredoxin containing pr | 99.14 | |
| d1iura_ | 88 | Hypothetical protein KIAA0730 {Human (Homo sapiens | 99.14 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 99.12 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 99.12 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 99.11 | |
| d1nz6a_ | 98 | Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} | 99.11 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 99.1 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 99.09 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 99.09 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 99.09 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 99.08 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 99.08 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 99.07 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 99.07 | |
| d2djja1 | 116 | Protein disulfide isomerase, PDI {Fungi (Humicola | 99.07 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 99.07 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 99.05 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 99.03 | |
| d2fwha1 | 117 | Thiol:disulfide interchange protein DsbD, C-termin | 99.03 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 99.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 99.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 98.96 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 98.94 | |
| d2b5ea1 | 140 | Protein disulfide isomerase, PDI {Baker's yeast (S | 98.93 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 98.9 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 98.9 | |
| d2b5ea4 | 119 | Protein disulfide isomerase, PDI {Baker's yeast (S | 98.88 | |
| d1thxa_ | 108 | Thioredoxin {Anabaena sp., pcc 7120 [TaxId: 1167]} | 98.87 | |
| d1meka_ | 120 | Protein disulfide isomerase, PDI {Human (Homo sapi | 98.86 | |
| d1nw2a_ | 105 | Thioredoxin {Alicyclobacillus acidocaldarius, form | 98.85 | |
| d2c0ga2 | 122 | Windbeutel, N-terminal domain {Fruit fly (Drosophi | 98.85 | |
| d2trcp_ | 217 | Phosducin {Rat (Rattus norvegicus) [TaxId: 10116]} | 98.84 | |
| d1fb6a_ | 104 | Thioredoxin {Spinach (Spinacia oleracea), thioredo | 98.83 | |
| d2trxa_ | 108 | Thioredoxin {Escherichia coli [TaxId: 562]} | 98.81 | |
| d1dbya_ | 107 | Thioredoxin {Chlamydomonas reinhardtii [TaxId: 305 | 98.8 | |
| d1a8ya1 | 124 | Calsequestrin {Rabbit (Oryctolagus cuniculus) [Tax | 98.76 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 98.71 | |
| d2fy6a1 | 143 | Peptide methionine sulfoxide reductase MsrA/MsrB, | 98.6 | |
| d1f9ma_ | 112 | Thioredoxin {Spinach (Spinacia oleracea), thioredo | 98.6 | |
| d1g7ea_ | 122 | Endoplasmic reticulum protein ERP29, N-terminal do | 98.58 | |
| d1qgva_ | 137 | spliceosomal protein U5-15Kd {Human (Homo sapiens) | 98.55 | |
| d1fo5a_ | 85 | MJ0307, thioredoxin/glutaredoxin-like protein {Arc | 98.53 | |
| d2ifqa1 | 105 | Thioredoxin {Human (Homo sapiens) [TaxId: 9606]} | 98.48 | |
| d1syra_ | 103 | Thioredoxin {Malarial parasite (Plasmodium falcipa | 98.47 | |
| d1ti3a_ | 113 | Thioredoxin {European aspen (Populus tremula), thi | 98.47 | |
| d1ep7a_ | 112 | Thioredoxin {Chlamydomonas reinhardtii [TaxId: 305 | 98.45 | |
| d1xfla_ | 114 | Thioredoxin {Thale cress (Arabidopsis thaliana) [T | 98.42 | |
| d1xwaa_ | 111 | Thioredoxin {Fruit fly (Drosophila melanogaster) [ | 98.42 | |
| d1r26a_ | 113 | Thioredoxin {Trypanosoma brucei [TaxId: 5691]} | 98.39 | |
| d1gh2a_ | 107 | Thioredoxin-like protein, N-terminal domain {Human | 98.39 | |
| d1z5ye1 | 136 | Thioredoxin-like protein CcmG (CycY, DsbE) {Escher | 98.36 | |
| d1nhoa_ | 85 | MTH807, thioredoxin/glutaredoxin-like protein {Arc | 98.36 | |
| d2djka1 | 133 | Protein disulfide isomerase, PDI {Fungi (Humicola | 98.35 | |
| d2es7a1 | 119 | Hydrogenase-1 operon protein HyaE {Salmonella typh | 98.35 | |
| d1zzoa1 | 134 | Lipoprotein DsbF {Mycobacterium tuberculosis [TaxI | 98.33 | |
| d1sena_ | 135 | Thioredoxin-like protein p19, TLP19 {Human (Homo s | 98.31 | |
| d1st9a_ | 137 | Thiol-disulfide oxidoreductase ResA {Bacillus subt | 98.29 | |
| d1lu4a_ | 134 | Soluble secreted antigen MPT53 {Mycobacterium tube | 98.28 | |
| d2hfda1 | 132 | Hydrogenase-1 operon protein HyaE {Escherichia col | 98.27 | |
| d2b5xa1 | 143 | thiol:disulfide oxidoreductase YkuV {Bacillus subt | 98.27 | |
| d1knga_ | 144 | Thioredoxin-like protein CcmG (CycY, DsbE) {Bradyr | 98.26 | |
| d1a8la2 | 107 | Protein disulfide isomerase, PDI {Archaeon Pyrococ | 98.18 | |
| d1wjka_ | 100 | Thioredoxin-like structure containing protein C330 | 98.18 | |
| d1bjxa_ | 110 | Protein disulfide isomerase, PDI {Human (Homo sapi | 98.16 | |
| d2dlxa1 | 147 | UBX domain-containing protein 7 {Human (Homo sapie | 98.14 | |
| d1i5ga_ | 144 | Tryparedoxin II {Crithidia fasciculata [TaxId: 565 | 98.07 | |
| d1woua_ | 119 | Putative 42-9-9 protein (thioredoxin containing pr | 98.07 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.06 | |
| d1zmaa1 | 115 | Bacterocin transport accessory protein Bta {Strept | 98.01 | |
| d1o73a_ | 144 | Tryparedoxin I {Trypanosoma brucei brucei [TaxId: | 97.99 | |
| d2fwha1 | 117 | Thiol:disulfide interchange protein DsbD, C-termin | 97.97 | |
| d1hyua4 | 96 | Alkyl hydroperoxide reductase subunit F (AhpF), N- | 97.95 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.89 | |
| d2b5ea3 | 125 | Protein disulfide isomerase, PDI {Baker's yeast (S | 97.75 | |
| d1o8xa_ | 144 | Tryparedoxin I {Crithidia fasciculata [TaxId: 5656 | 97.74 | |
| d2cvba1 | 187 | Probable thiol-disulfide isomerase/thioredoxin TTH | 97.62 | |
| d1sena_ | 135 | Thioredoxin-like protein p19, TLP19 {Human (Homo s | 97.62 | |
| d1jfua_ | 176 | Membrane-anchored thioredoxin-like protein TlpA, s | 97.61 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.59 | |
| d1a8ya2 | 102 | Calsequestrin {Rabbit (Oryctolagus cuniculus) [Tax | 97.57 | |
| d2trcp_ | 217 | Phosducin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.4 | |
| d1z6na1 | 166 | Hypothetical protein PA1234 {Pseudomonas aeruginos | 97.01 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 96.98 | |
| d2fy6a1 | 143 | Peptide methionine sulfoxide reductase MsrA/MsrB, | 96.98 | |
| d1i5ga_ | 144 | Tryparedoxin II {Crithidia fasciculata [TaxId: 565 | 96.89 | |
| d1zzoa1 | 134 | Lipoprotein DsbF {Mycobacterium tuberculosis [TaxI | 96.66 | |
| d1o73a_ | 144 | Tryparedoxin I {Trypanosoma brucei brucei [TaxId: | 96.63 | |
| d1lu4a_ | 134 | Soluble secreted antigen MPT53 {Mycobacterium tube | 96.59 | |
| d2djka1 | 133 | Protein disulfide isomerase, PDI {Fungi (Humicola | 96.54 | |
| d2b5ea3 | 125 | Protein disulfide isomerase, PDI {Baker's yeast (S | 96.42 | |
| d2b5xa1 | 143 | thiol:disulfide oxidoreductase YkuV {Bacillus subt | 96.23 | |
| d1z5ye1 | 136 | Thioredoxin-like protein CcmG (CycY, DsbE) {Escher | 96.15 | |
| d1knga_ | 144 | Thioredoxin-like protein CcmG (CycY, DsbE) {Bradyr | 96.02 | |
| d1st9a_ | 137 | Thiol-disulfide oxidoreductase ResA {Bacillus subt | 95.94 | |
| d1eeja1 | 156 | Disulfide bond isomerase, DsbC, C-terminal domain | 95.94 | |
| d1o8xa_ | 144 | Tryparedoxin I {Crithidia fasciculata [TaxId: 5656 | 95.9 | |
| d2cx4a1 | 160 | Bacterioferritin comigratory protein {Archaeon Aer | 95.77 | |
| d2bmxa1 | 169 | Alkyl hydroperoxide reductase AhpC {Mycobacterium | 95.75 | |
| d1e2ya_ | 167 | Tryparedoxin peroxidase (thioredoxin peroxidase ho | 95.74 | |
| d1bjxa_ | 110 | Protein disulfide isomerase, PDI {Human (Homo sapi | 95.62 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 95.49 | |
| d1z6na1 | 166 | Hypothetical protein PA1234 {Pseudomonas aeruginos | 95.2 | |
| d1t3ba1 | 150 | Disulfide bond isomerase, DsbC, C-terminal domain | 95.16 | |
| d1uula_ | 194 | Tryparedoxin peroxidase (thioredoxin peroxidase ho | 94.87 | |
| d2cvba1 | 187 | Probable thiol-disulfide isomerase/thioredoxin TTH | 94.86 | |
| d1z6ma1 | 172 | Hypothetical protein EF0770 {Enterococcus faecalis | 94.71 | |
| d1jfua_ | 176 | Membrane-anchored thioredoxin-like protein TlpA, s | 94.67 | |
| d1beda_ | 181 | Disulfide-bond formation facilitator (DsbA) {Vibri | 94.49 | |
| d2f8aa1 | 184 | Glutathione peroxidase {Human (Homo sapiens) [TaxI | 94.44 | |
| d1a8ya2 | 102 | Calsequestrin {Rabbit (Oryctolagus cuniculus) [Tax | 94.43 | |
| d1we0a1 | 166 | Alkyl hydroperoxide reductase AhpC {Amphibacillus | 94.32 | |
| d2a4va1 | 156 | Peroxiredoxin dot5 {Baker's yeast (Saccharomyces c | 94.3 | |
| d1v58a1 | 169 | Thiol:disulfide interchange protein DsbG, C-termin | 93.95 | |
| d1a8la1 | 119 | Protein disulfide isomerase, PDI {Archaeon Pyrococ | 93.95 | |
| d1zofa1 | 170 | Thioredoxin reductase TsaA {Helicobacter pylori [T | 93.9 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 93.66 | |
| d2zcta1 | 237 | Peroxiredoxin {Aeropyrum pernix [TaxId: 56636]} | 93.64 | |
| d1iloa_ | 77 | MTH985, a thioredoxin {Archaeon Methanobacterium t | 93.6 | |
| d2h01a1 | 170 | Thioredoxin peroxidase 2 (thioredoxin peroxidase B | 92.77 | |
| d2dlxa1 | 147 | UBX domain-containing protein 7 {Human (Homo sapie | 92.4 | |
| d1wjka_ | 100 | Thioredoxin-like structure containing protein C330 | 92.13 | |
| d1r7ha_ | 74 | Glutaredoxin-like NRDH-redoxin {Corynebacterium am | 92.05 | |
| d1ttza_ | 75 | Hypothetical protein XCC2852 {Xanthomonas campestr | 91.96 | |
| d1egoa_ | 85 | Glutaredoxin (Grx, thioltransferase) {Escherichia | 91.6 | |
| d1zyea1 | 158 | Peroxiredoxin-3 (AOP-1, SP-22) {Cow (Bos taurus) [ | 91.29 | |
| d1xvwa1 | 153 | Putative peroxiredoxin Rv2238c/MT2298 {Mycobacteri | 90.82 | |
| d1e2ya_ | 167 | Tryparedoxin peroxidase (thioredoxin peroxidase ho | 89.7 | |
| d1n8ja_ | 186 | Alkyl hydroperoxide reductase AhpC {Salmonella typ | 89.56 | |
| d1h75a_ | 76 | Glutaredoxin-like NRDH-redoxin {Escherichia coli [ | 89.42 | |
| d2cx4a1 | 160 | Bacterioferritin comigratory protein {Archaeon Aer | 89.38 | |
| d2f8aa1 | 184 | Glutathione peroxidase {Human (Homo sapiens) [TaxI | 88.63 | |
| d1wp0a1 | 160 | Thioredoxin-like protein Sco1 (YpmQ), soluble doma | 88.21 | |
| d1fvka_ | 188 | Disulfide-bond formation facilitator (DsbA) {Esche | 88.15 | |
| d1qmva_ | 197 | Thioredoxin peroxidase 2 (thioredoxin peroxidase B | 87.2 | |
| d1qxha_ | 164 | Thiol peroxidase Tpx {Escherichia coli [TaxId: 562 | 85.75 | |
| d1a8ya3 | 119 | Calsequestrin {Rabbit (Oryctolagus cuniculus) [Tax | 85.66 | |
| d1we0a1 | 166 | Alkyl hydroperoxide reductase AhpC {Amphibacillus | 85.0 | |
| d1prxa_ | 220 | 1-Cys peroxiredoxin {Human (Homo sapiens) [TaxId: | 84.66 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 84.29 | |
| d2bmxa1 | 169 | Alkyl hydroperoxide reductase AhpC {Mycobacterium | 84.05 | |
| d1psqa_ | 163 | Probable thiol peroxidase PsaD {Streptococcus pneu | 83.77 | |
| d1zofa1 | 170 | Thioredoxin reductase TsaA {Helicobacter pylori [T | 82.25 | |
| d1fova_ | 82 | Glutaredoxin (Grx, thioltransferase) {Escherichia | 81.6 | |
| d1qxha_ | 164 | Thiol peroxidase Tpx {Escherichia coli [TaxId: 562 | 81.45 |
| >d2b5ea4 c.47.1.2 (A:23-141) Protein disulfide isomerase, PDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: PDI-like domain: Protein disulfide isomerase, PDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.72 E-value=4.8e-18 Score=169.38 Aligned_cols=106 Identities=14% Similarity=0.286 Sum_probs=94.6
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++++|.++|++.+ +++++++|.||+|||++|+++.|.|++++..+.+.++.|++|||+.++++|++|+|.+ +|||+
T Consensus 12 v~~lt~~~f~~~i---~~~~~~lV~fya~wC~~C~~~~~~~~~la~~~~~~~v~~~~vd~~~~~~l~~~~~v~~-~Pti~ 87 (119)
T d2b5ea4 12 VVKLATDSFNEYI---QSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPG-FPSLK 87 (119)
T ss_dssp CEECCTTTHHHHH---TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred cEEcCHHHHHHHH---hcCCeEEEEEECCccCcccccchhhhhhhhhhcccceeeeeeeccchHHHHHHhcccc-CCeEE
Confidence 4579999999876 4578999999999999999999999999999976569999999999999999999998 99999
Q ss_pred EEcCCccc--cccCCCCCHHHHHHHHHhhCCC
Q psy12972 935 LLTDGRTS--FFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 935 lf~~G~~~--~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+|++|+.. ..|.|.++.++|++|++++..|
T Consensus 88 ~f~~g~~~~~~~y~g~~~~~~l~~fi~k~~~P 119 (119)
T d2b5ea4 88 IFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQP 119 (119)
T ss_dssp EEETTCTTCEEECCSCCSHHHHHHHHHHHTSC
T ss_pred EEECCEEeeeEEecCCCCHHHHHHHHHHhhCC
Confidence 99998754 2356999999999999988754
|
| >d1thxa_ c.47.1.1 (A:) Thioredoxin {Anabaena sp., pcc 7120 [TaxId: 1167]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Anabaena sp., pcc 7120 [TaxId: 1167]
Probab=99.71 E-value=4.7e-18 Score=166.31 Aligned_cols=104 Identities=18% Similarity=0.397 Sum_probs=96.3
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++++|++||++.+.+. +++++|.|||+||++|+.+.|.|++++..+.+. +.+++|||++++++|++|+|++ +||++
T Consensus 4 V~~lt~~~f~~~v~~~--~~~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~d~~~~l~~~~~I~~-~Pt~~ 79 (108)
T d1thxa_ 4 VITITDAEFESEVLKA--EQPVLVYFWASWCGPCQLMSPLINLAANTYSDR-LKVVKLEIDPNPTTVKKYKVEG-VPALR 79 (108)
T ss_dssp EEECCGGGHHHHTTTC--SSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEESTTCHHHHHHTTCCS-SSEEE
T ss_pred ceECCHHHHHHHHHhC--CCcEEEEEECCCCCCccccchHHHHHHHhcCCc-ceeceecccccHHHHHHhcccC-CCEEE
Confidence 5789999999877644 789999999999999999999999999999876 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|++|+.+..+.|.++.++|.+|+++++
T Consensus 80 ~~~~g~~v~~~~G~~~~~~l~~~i~~~L 107 (108)
T d1thxa_ 80 LVKGEQILDSTEGVISKDKLLSFLDTHL 107 (108)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEECCEEEEEEeCCCCHHHHHHHHHHhc
Confidence 9999998888889999999999998865
|
| >d1fb6a_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea), thioredoxin M [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Spinach (Spinacia oleracea), thioredoxin M [TaxId: 3562]
Probab=99.70 E-value=6.5e-18 Score=164.12 Aligned_cols=103 Identities=15% Similarity=0.386 Sum_probs=95.6
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
.++|++||++.|.++ ++|++|.|||+||++|+.+.|.|+++++.+.+. +.+++||++.++++|++|+|++ +||+++
T Consensus 2 ~el~d~~f~~~v~~~--~~~vlv~F~a~wC~~C~~~~~~~~~l~~~~~~~-~~~~~v~~d~~~~l~~~~~V~~-~Pt~~~ 77 (104)
T d1fb6a_ 2 QDVNDSSWKEFVLES--EVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK-IAVYKLNTDEAPGIATQYNIRS-IPTVLF 77 (104)
T ss_dssp EECCTTTHHHHTTTC--SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCS-SSEEEE
T ss_pred eECchhhHHHHHHcC--CCcEEEEEEcCccCCccccCchhHHHHHhhcCc-cceeEEecccchhhhhhcceee-eeEEEE
Confidence 479999999988654 789999999999999999999999999999876 8999999999999999999998 999999
Q ss_pred EcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 936 LTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 936 f~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|++|+.+..+.|.++.+.|.+|+.+++
T Consensus 78 ~~~G~~v~~~~G~~~~~~l~~~i~~~L 104 (104)
T d1fb6a_ 78 FKNGERKESIIGAVPKSTLTDSIEKYL 104 (104)
T ss_dssp EETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 999998888889999999999998764
|
| >d1nw2a_ c.47.1.1 (A:) Thioredoxin {Alicyclobacillus acidocaldarius, formerly Bacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Alicyclobacillus acidocaldarius, formerly Bacillus acidocaldarius [TaxId: 405212]
Probab=99.69 E-value=1.2e-17 Score=162.62 Aligned_cols=102 Identities=18% Similarity=0.344 Sum_probs=94.5
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
+.+|++||++.+ +++++++|.||||||++|+.+.|.|++++.++.+. +.+++|||+.++.+|++|+|.+ +||+++
T Consensus 3 i~lt~~~f~~~i---~~~k~vvv~F~a~wC~~C~~~~~~~~~l~~~~~~~-~~~~~vd~~~~~~~~~~~~V~~-~Pt~~~ 77 (105)
T d1nw2a_ 3 MTLTDANFQQAI---QGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK-VTVAKLNVDENPETTSQFGIMS-IPTLIL 77 (105)
T ss_dssp EEECTTTHHHHT---TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETTTCHHHHHHTTCCB-SSEEEE
T ss_pred EEECHHHHHHHH---hCCCcEEEEEECCCCCCcccccchhhhhhhhcCCc-eEEEEEECCCCcccHHHCCcce-eeEEEE
Confidence 579999999876 45789999999999999999999999999999876 9999999999999999999998 999999
Q ss_pred EcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 936 LTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 936 f~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|++|+....+.|..+.++|.+++.+.+
T Consensus 78 ~~~G~~~~~~~G~~~~~~l~~~i~~~L 104 (105)
T d1nw2a_ 78 FKGGEPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp EETTEEEEEEESCCCHHHHHHHTTTTC
T ss_pred EECCEEEEEEECCCCHHHHHHHHHHHh
Confidence 999998877789999999999998764
|
| >d2trxa_ c.47.1.1 (A:) Thioredoxin {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Escherichia coli [TaxId: 562]
Probab=99.69 E-value=1.3e-17 Score=163.03 Aligned_cols=104 Identities=21% Similarity=0.481 Sum_probs=95.9
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+++||+++|++.+.+. +++++|.||||||++|+.+.|.+.++|..+.+. +.++.+|+++++.+|++|+|.+ +||++
T Consensus 4 v~~lt~~~f~~~v~~~--~~~v~v~F~a~wC~~C~~~~~~~~~~a~~~~~~-~~~~~vd~d~~~~l~~~~~v~~-~PT~~ 79 (108)
T d2trxa_ 4 IIHLTDDSFDTDVLKA--DGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQNPGTAPKYGIRG-IPTLL 79 (108)
T ss_dssp EEECCTTTHHHHTTTC--SSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTTCTTHHHHTTCCS-SSEEE
T ss_pred ceECCHHHHHHHHHhC--CCcEEEEEECCCCCCccccCcHHHHHHHHhhcc-eeeeeccccchhhHHHHhCCCc-EEEEE
Confidence 5689999999877644 789999999999999999999999999998776 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|++|+.+..+.|.++.++|.+||.+++
T Consensus 80 ~~~~G~~v~~~~G~~~~~~l~~~i~~~L 107 (108)
T d2trxa_ 80 LFKNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEECCEEEEEEeCCCCHHHHHHHHHHhc
Confidence 9999998887889999999999998765
|
| >d1dbya_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Chlamydomonas reinhardtii [TaxId: 3055]
Probab=99.69 E-value=1.6e-17 Score=162.27 Aligned_cols=103 Identities=17% Similarity=0.357 Sum_probs=95.4
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
..+|++||++.+.++ ++|++|.||||||++|+.+.|.|.+++..+.+. +.+++|||+.++++|++|+|++ +||+++
T Consensus 4 ~~i~~~~f~~~v~~s--~kpvlv~F~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~vd~d~~~~l~~~~~V~~-~Pt~~~ 79 (107)
T d1dbya_ 4 GAVNDDTFKNVVLES--SVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK-LKCVKLNTDESPNVASEYGIRS-IPTIMV 79 (107)
T ss_dssp EEECHHHHHHHTTTC--SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHHTCCS-SCEEEE
T ss_pred eEecHHHHHHHHHhC--CCcEEEEEECCCCCCccccChHHHHHHHhhccc-ceEEEEecccchhHHHHhcccc-eEEEEE
Confidence 468999999988654 789999999999999999999999999999876 8999999999999999999998 999999
Q ss_pred EcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 936 LTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 936 f~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|++|+.+..+.|.++.++|.+|+++++
T Consensus 80 ~~~G~~v~~~~G~~~~~~l~~~i~~~L 106 (107)
T d1dbya_ 80 FKGGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp ESSSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred EECCeEEEEEeCCCCHHHHHHHHHHhh
Confidence 999998887789999999999999876
|
| >d1a8ya1 c.47.1.3 (A:3-126) Calsequestrin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Calsequestrin domain: Calsequestrin species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.68 E-value=1.1e-17 Score=167.88 Aligned_cols=105 Identities=19% Similarity=0.222 Sum_probs=90.0
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCccc------ccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFAC------LQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGS 928 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~C------k~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~ 928 (1578)
+++||++||++.+ ++++.++|+||||||+|| +.+.+.++.+|+.+++.+|.|++|||++++++|++|+|++
T Consensus 13 V~~L~~~nf~~~l---~~~~~~~V~FyapwC~~~~~~~~~~~~~~~~~~~a~~~~~~~v~~a~Vd~~~~~~l~~~~~I~~ 89 (124)
T d1a8ya1 13 VINVNAKNYKNVF---KKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLTE 89 (124)
T ss_dssp CEECCTTTHHHHH---HHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEETTTSHHHHHTTTCCS
T ss_pred cEECCHHHHHHHH---HhCCeEEEEEECCCccchhhhhHHHHHHHHHHHHHHHhccCCeEEEEEEeecccchhhcccccc
Confidence 5689999999877 335789999999999974 4555666677777777679999999999999999999998
Q ss_pred cCCcEEEEcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 929 QLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 929 ~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
||||++|++|+.+.| .|.++.++|++|+.+.+.+
T Consensus 90 -yPTi~~f~~g~~~~y-~G~r~~~~l~~fi~~~l~~ 123 (124)
T d1a8ya1 90 -EDSIYVFKEDEVIEY-DGEFSADTLVEFLLDVLED 123 (124)
T ss_dssp -TTCEEEEESSSEEEC-CSCCSHHHHHHHHHHHHSC
T ss_pred -CCcEEEeccCccEEe-eCCCCHHHHHHHHHHhcCC
Confidence 999999999988765 5999999999999987754
|
| >d1meka_ c.47.1.2 (A:) Protein disulfide isomerase, PDI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: PDI-like domain: Protein disulfide isomerase, PDI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=2.2e-17 Score=164.59 Aligned_cols=108 Identities=22% Similarity=0.393 Sum_probs=95.5
Q ss_pred EEEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC--ceEEEEEECccchhhHhHcCccccCC
Q psy12972 854 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHVHNEQGLARRLGVGSQLP 931 (1578)
Q Consensus 854 ~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~--~v~~a~VDc~~~~~L~~k~gV~~~~P 931 (1578)
.++.+|.+||++.+ +++++++|.||||||++|+.+.|.|+++++.+.+. .+.+++|||+.++.+|++|+|.+ +|
T Consensus 8 ~V~~l~~~~f~~~l---~~~k~vlV~Fya~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~-~P 83 (120)
T d1meka_ 8 HVLVLRKSNFAEAL---AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRG-YP 83 (120)
T ss_dssp TEEECCTTTHHHHH---HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCS-SS
T ss_pred CeEEcCHHHHHHHH---hcCCcEEEEEECCCcCCccccchhhhhhcccccccccceeeeccccccchhHHHHhCCcc-CC
Confidence 36679999999866 34789999999999999999999999999999754 38999999999999999999998 99
Q ss_pred cEEEEcCCccc--cccCCCCCHHHHHHHHHhhCCCc
Q psy12972 932 QIALLTDGRTS--FFKEPSFSVQKMVEFFRLKLPYK 965 (1578)
Q Consensus 932 Tl~lf~~G~~~--~y~~G~~s~~~L~~fi~~~lp~~ 965 (1578)
|+++|++|+.. ..+.|.++.++|.+||+++++|+
T Consensus 84 t~~~~~~G~~~~~~~~~g~~~~~~l~~fi~~~~~p~ 119 (120)
T d1meka_ 84 TIKFFRNGDTASPKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp EEEEEESSCSSSCEECCCCSSHHHHHHHHHTTSCCC
T ss_pred eEEEEECCeEeeeEEecCCCCHHHHHHHHHHhhCCC
Confidence 99999998653 34569999999999999999774
|
| >d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Long alpha-hairpin superfamily: Chaperone J-domain family: Chaperone J-domain domain: DnaJ chaperone, N-terminal (J) domain species: Escherichia coli [TaxId: 562]
Probab=99.62 E-value=1.6e-16 Score=144.34 Aligned_cols=70 Identities=47% Similarity=0.858 Sum_probs=65.5
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
..|+|++|||+++||.++||+|||++++++|||+++ ++.++++|++|++||++|+||.+|..||.+|..+
T Consensus 2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~ 72 (75)
T d1xbla_ 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAA 72 (75)
T ss_dssp CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSS
T ss_pred CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCccc
Confidence 579999999999999999999999999999999987 4678889999999999999999999999998764
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.62 E-value=3.1e-16 Score=168.94 Aligned_cols=142 Identities=15% Similarity=0.163 Sum_probs=93.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
++||+|++|+||+|+..+|++|||||++++...... .....+ ................|.+
T Consensus 6 ~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~---------------~~~~~~----~~~~~~~~~~~~~~~~e~~ 66 (191)
T d1zara2 6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKK---------------VKEKRD----YGDLHFSVLAIRSARNEFR 66 (191)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------C---------------CCC-----------CHHHHHHHHHHHHHH
T ss_pred CEeeeCcceEEEEEECCCCCEEEEEEEecccchhhh---------------hhhhhh----hccHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999987542100 000000 0000001112234466778
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHS 568 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHP 568 (1578)
++.++. .+.+|.++. ....+|+|||++|.++.++. ......++..++++ +..+|..|++|||+||
T Consensus 67 ~l~~l~-------~~~v~~~~~--~~~~~lvme~~~~~~~~~l~-----~~~~~~i~~ql~~~-l~~lH~~giiHrDiKP 131 (191)
T d1zara2 67 ALQKLQ-------GLAVPKVYA--WEGNAVLMELIDAKELYRVR-----VENPDEVLDMILEE-VAKFYHRGIVHGDLSQ 131 (191)
T ss_dssp HHHHTT-------TSSSCCEEE--EETTEEEEECCCCEEGGGCC-----CSCHHHHHHHHHHH-HHHHHHTTEECSCCST
T ss_pred HHHHcc-------CCCcceEEE--ecCCEEEEEeeccccccchh-----hHHHHHHHHHHHHH-HHHHhhCCEEEccCCh
Confidence 887764 345777763 34679999999998876542 12345666666654 7789999999999999
Q ss_pred CCCCCC--eeEEecCCch
Q psy12972 569 GNDVNT--WLYPVDLGDK 584 (1578)
Q Consensus 569 GNilv~--~v~liDfG~~ 584 (1578)
+|||++ .+++||||..
T Consensus 132 ~NILv~~~~~~liDFG~a 149 (191)
T d1zara2 132 YNVLVSEEGIWIIDFPQS 149 (191)
T ss_dssp TSEEEETTEEEECCCTTC
T ss_pred hheeeeCCCEEEEECCCc
Confidence 999965 4677777743
|
| >d2c0ga2 c.47.1.7 (A:1024-1145) Windbeutel, N-terminal domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: ERP29 N domain-like domain: Windbeutel, N-terminal domain species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.60 E-value=3.6e-16 Score=156.31 Aligned_cols=103 Identities=16% Similarity=0.214 Sum_probs=87.5
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCC--CceEEEEEECcc-----chhhHhHcCc--
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP--LGVGFFTVHVHN-----EQGLARRLGV-- 926 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~--~~v~~a~VDc~~-----~~~L~~k~gV-- 926 (1578)
++||+.||++.| ++++.+||+||||||+||++ |+|+++|+.+.. ..+.+++|||+. ++++|++|+|
T Consensus 5 v~L~~~nFd~~v---~~~~~~lV~Fya~wC~~ck~--p~f~kla~~~~~~~~~v~ia~Vd~~~~~~~~n~~l~~~~~i~~ 79 (122)
T d2c0ga2 5 VDLDELSFEKTV---ERFPYSVVKFDIASPYGEKH--EAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDD 79 (122)
T ss_dssp EECCTTTHHHHH---TTSSEEEEEEEESSCCSHHH--HHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCCT
T ss_pred EEcChHhHHHHH---hcCCcEEEEEECCCCCcccC--HHHHHHHHHHHHhCCCeEEEeccccccccccCHHHHHHhhccc
Confidence 589999999988 55789999999999999994 999999998752 349999999964 6899999998
Q ss_pred cccCCcEEEEcCCcc---ccccCCCCCHHHHHHHHHhhCCC
Q psy12972 927 GSQLPQIALLTDGRT---SFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 927 ~~~~PTl~lf~~G~~---~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
++ |||+++|++|.. ...+.|.++.++|.+|++++.+.
T Consensus 80 ~~-~PTi~~f~~g~~~~~~~~~~g~rt~~~l~~fv~~~~~~ 119 (122)
T d2c0ga2 80 KN-FPSIFLFKGNADEYVQLPSHVDVTLDNLKAFVSANTPL 119 (122)
T ss_dssp TS-CCEEEEESSSSSSEEECCTTSCCCHHHHHHHHHHHSSC
T ss_pred CC-CCcEEEEeCCcccccccccCCCCCHHHHHHHHHHhcCc
Confidence 46 999999998763 23456899999999999998763
|
| >d2djja1 c.47.1.2 (A:6-121) Protein disulfide isomerase, PDI {Fungi (Humicola insolens) [TaxId: 34413]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: PDI-like domain: Protein disulfide isomerase, PDI species: Fungi (Humicola insolens) [TaxId: 34413]
Probab=99.59 E-value=3.3e-16 Score=154.76 Aligned_cols=106 Identities=17% Similarity=0.253 Sum_probs=87.0
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCc-eEEEEEECccchhhHhHcCccccCCcE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG-VGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~-v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+..||.+||++.|.++ +++|||.||||||+||+++.|.|+++|+.+.+.. ..+..+++.....+|.+++|.+ ||||
T Consensus 4 V~~lt~~nF~~~v~~~--~k~vlV~fya~wC~~Ck~~~p~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~Pti 80 (116)
T d2djja1 4 VTVVVAKNYNEIVLDD--TKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPDEIQG-FPTI 80 (116)
T ss_dssp SEECCTTTTTTSSSCT--TSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCSSCCSS-SSEE
T ss_pred cEEcccCCHHHHHhcC--CCCEEEEEEecccccccccchHHHHHHHHHhcccccceeEEEecccchhhhcccccC-CCEE
Confidence 3579999999988644 7899999999999999999999999999997653 2234455555566778999998 9999
Q ss_pred EEEcCCccc--cccCCCCCHHHHHHHHHhhCC
Q psy12972 934 ALLTDGRTS--FFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 934 ~lf~~G~~~--~y~~G~~s~~~L~~fi~~~lp 963 (1578)
++|++|+.. ..+.|.++.++|.+||.++..
T Consensus 81 ~~f~~g~~~~~~~~~g~~~~~~l~~fi~~~~~ 112 (116)
T d2djja1 81 KLYPAGAKGQPVTYSGSRTVEDLIKFIAENGK 112 (116)
T ss_dssp EEECSSCTTSCCCCCCCSCHHHHHHHHHHTSS
T ss_pred EEEECCccCceEEecCCCCHHHHHHHHHHccC
Confidence 999887642 345699999999999998764
|
| >d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Long alpha-hairpin superfamily: Chaperone J-domain family: Chaperone J-domain domain: HSP40 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=6.5e-16 Score=141.20 Aligned_cols=70 Identities=44% Similarity=0.838 Sum_probs=67.0
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
..|+|++|||++++|.++|++||+++++++|||+++++.+.++|+.|++||++|+||.+|+.||++|..+
T Consensus 2 ~kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~~~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~~ 71 (77)
T d1hdja_ 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEG 71 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGG
T ss_pred CCChHHHcCCCCCcCHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhh
Confidence 3699999999999999999999999999999999999999999999999999999999999999998875
|
| >d2b5ea1 c.47.1.2 (A:365-504) Protein disulfide isomerase, PDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: PDI-like domain: Protein disulfide isomerase, PDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.57 E-value=3e-16 Score=160.63 Aligned_cols=106 Identities=19% Similarity=0.359 Sum_probs=89.5
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCc--eEEEEEECccchhhHhHcCccccCCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG--VGFFTVHVHNEQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~--v~~a~VDc~~~~~L~~k~gV~~~~PT 932 (1578)
+++|+.+||++.|.+. ++++||.||||||++|+++.|.|+++|+.+.+.+ +.++.+||+ .++|++|+|++ +||
T Consensus 14 V~~l~~~nf~~~v~~~--~k~vlV~F~a~wC~~C~~~~p~~~~la~~~~~~~~~v~~~~~d~~--~~~~~~~~v~~-~Pt 88 (140)
T d2b5ea1 14 VFQLVGKNHDEIVNDP--KKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHT--ENDVRGVVIEG-YPT 88 (140)
T ss_dssp EEEECTTTHHHHHHCT--TCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGG--GCCCSSCCCSS-SSE
T ss_pred cEEecCcCHHHHHhcC--CCCEEEEEEeccCcccchhHHHHHHHHHHHhccccceEEEeeecc--chhcccccccc-CCe
Confidence 6789999999988644 6799999999999999999999999999986432 677777775 46899999998 999
Q ss_pred EEEEcCCccc--cccCCCCCHHHHHHHHHhhCCCc
Q psy12972 933 IALLTDGRTS--FFKEPSFSVQKMVEFFRLKLPYK 965 (1578)
Q Consensus 933 l~lf~~G~~~--~y~~G~~s~~~L~~fi~~~lp~~ 965 (1578)
|++|++|+.. ..|.|.++.++|++||.++....
T Consensus 89 l~~f~~g~~~~~~~y~G~~t~~~l~~fi~~~~~~~ 123 (140)
T d2b5ea1 89 IVLYPGGKKSESVVYQGSRSLDSLFDFIKENGHFD 123 (140)
T ss_dssp EEEECCTTSCCCCBCCSCCCHHHHHHHHHHHCTTC
T ss_pred EEEEECCEEcceeEeCCCCCHHHHHHHHHHcCCCC
Confidence 9999988653 33569999999999999887553
|
| >d1ep7a_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Chlamydomonas reinhardtii [TaxId: 3055]
Probab=99.57 E-value=7.5e-16 Score=151.57 Aligned_cols=104 Identities=18% Similarity=0.342 Sum_probs=92.2
Q ss_pred Eee-ccccccceeccc-CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 856 LST-THWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 856 i~L-t~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+.+ |.++|++.+... ..+++++|+|||+||++|+.+.|.|+++++.+.+. +.|++|||++++++|++|+|++ +||+
T Consensus 5 ~~i~t~~~fd~~l~~~~~~~k~vvv~f~a~wC~~C~~~~p~~~~l~~~~~~~-v~~~~vd~d~~~~l~~~~~v~~-~Pt~ 82 (112)
T d1ep7a_ 5 IVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGK-VIFLKVDVDAVAAVAEAAGITA-MPTF 82 (112)
T ss_dssp EEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTTTHHHHHHHTCCB-SSEE
T ss_pred EEEeCHHHHHHHHHHHhhcCCeEEEEEEcCCcCCCcccchhhhhhhhcccce-EEEEEeeccccccccccccccC-CCEE
Confidence 344 678888877543 34789999999999999999999999999999875 9999999999999999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
++|++|+.+....| .+.++|.+||.++.
T Consensus 83 ~~~~~G~~v~~~~G-~~~~~l~~~i~k~~ 110 (112)
T d1ep7a_ 83 HVYKDGVKADDLVG-ASQDKLKALVAKHA 110 (112)
T ss_dssp EEEETTEEEEEEES-CCHHHHHHHHHHHH
T ss_pred EEEECCEEEEEEeC-cCHHHHHHHHHHHh
Confidence 99999998888878 58899999998875
|
| >d1f9ma_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea), thioredoxin F [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Spinach (Spinacia oleracea), thioredoxin F [TaxId: 3562]
Probab=99.55 E-value=3.4e-15 Score=146.77 Aligned_cols=102 Identities=19% Similarity=0.351 Sum_probs=89.8
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc-chhhHhHcCccccCCcE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-EQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~-~~~L~~k~gV~~~~PTl 933 (1578)
+.++|.++|.+.+. .+.+++++|+||++||++|+.+.|.|+++++++.+ +.++++||+. ++++|++|+|++ +||+
T Consensus 8 v~~~~~d~f~~~l~-~~~~k~vvv~f~a~wC~~C~~~~p~~~~l~~~~~~--v~~~~vd~~~~~~~l~~~~~V~~-~Pt~ 83 (112)
T d1f9ma_ 8 VTEVNKDTFWPIVK-AAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD--VIFLKLDCNQENKTLAKELGIRV-VPTF 83 (112)
T ss_dssp EEEECTTTHHHHHH-TCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSSTTHHHHHHHCCSS-SSEE
T ss_pred eEEeCHHHHHHHHH-HcCCCEEEEEEEcCCCcchHHHHHHHhhhcccccc--ceeecccccccchhhHhheeecc-CCEE
Confidence 56789999998664 34578999999999999999999999999999875 7899999975 789999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
++|++|+.+..+.|. +.+.+.++|++.
T Consensus 84 ~~~k~G~~v~~~~G~-~~~~l~e~i~~~ 110 (112)
T d1f9ma_ 84 KILKENSVVGEVTGA-KYDKLLEAIQAA 110 (112)
T ss_dssp EEEETTEEEEEEESS-CHHHHHHHHHHH
T ss_pred EEEECCEEEEEEeCC-CHHHHHHHHHHc
Confidence 999999998888785 778999999764
|
| >d2ifqa1 c.47.1.1 (A:1-105) Thioredoxin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=6e-15 Score=143.27 Aligned_cols=99 Identities=19% Similarity=0.320 Sum_probs=86.7
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
+.++|++.+. .+.+++++|.|||+||++|+.+.|.++++++.+.+ +.+++||++++++++++|+|++ +||+++|++
T Consensus 7 s~~~f~~~l~-~~~~k~vvv~F~a~wC~~C~~~~p~~~~l~~~~~~--~~~~~vd~d~~~~~~~~~~V~~-~Pt~~~~~~ 82 (105)
T d2ifqa1 7 SKTAFQEALD-AAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVDDCQDVASECEVKC-MPTFQFFKK 82 (105)
T ss_dssp SHHHHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCB-SSEEEEEET
T ss_pred CHHHHHHHHH-hCCCCEEEEEEEcCCccchhhhhhhhhhhcccccc--ceeeecccccCHhHHHHcCceE-EEEEEEEEC
Confidence 4566777653 34578999999999999999999999999999865 6799999999999999999998 999999999
Q ss_pred CccccccCCCCCHHHHHHHHHhhC
Q psy12972 939 GRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 939 G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|+.+..+.|. +.++|.+++.+.+
T Consensus 83 G~~v~~~~G~-~~~~l~~~i~~~l 105 (105)
T d2ifqa1 83 GQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp TEEEEEEESC-CHHHHHHHHHHHC
T ss_pred CEEEEEEeCC-CHHHHHHHHHhhC
Confidence 9998888784 7899999998753
|
| >d1syra_ c.47.1.1 (A:) Thioredoxin {Malarial parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Malarial parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.51 E-value=4.9e-15 Score=143.36 Aligned_cols=97 Identities=14% Similarity=0.340 Sum_probs=86.8
Q ss_pred eccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEc
Q psy12972 858 TTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLT 937 (1578)
Q Consensus 858 Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~ 937 (1578)
.|.++|++.+ +++++++|.||++||++|+.+.|.++++++++.+ +.++++|+++++++|++|+|.+ +||+++|+
T Consensus 6 ~s~~~f~~~i---~~~~~vvv~F~a~wC~~C~~~~~~~~~l~~~~~~--~~~~~vd~d~~~~~~~~~~V~~-~Pt~i~~k 79 (103)
T d1syra_ 6 TSQAEFDSII---SQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK--MVFIKVDVDEVSEVTEKENITS-MPTFKVYK 79 (103)
T ss_dssp CSHHHHHHHH---HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTTHHHHHHTTCCS-SSEEEEEE
T ss_pred CCHHHHHHHH---hCCCcEEEEEeCCcccCcccccccchhhhhcccc--eEEEeeccccCcceeeeeeeec-ceEEEEEE
Confidence 4677888866 3478999999999999999999999999999865 6899999999999999999998 99999999
Q ss_pred CCccccccCCCCCHHHHHHHHHhh
Q psy12972 938 DGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 938 ~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
+|+.+..+.| .+.++|.+||+++
T Consensus 80 ~G~~v~~~~G-~~~~~l~~~i~k~ 102 (103)
T d1syra_ 80 NGSSVDTLLG-ANDSALKQLIEKY 102 (103)
T ss_dssp TTEEEEEEES-CCHHHHHHHHHTT
T ss_pred CCEEEEEEeC-cCHHHHHHHHHhh
Confidence 9998877778 4789999999875
|
| >d1gh2a_ c.47.1.1 (A:) Thioredoxin-like protein, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin-like protein, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=8.2e-15 Score=142.84 Aligned_cols=100 Identities=17% Similarity=0.260 Sum_probs=89.4
Q ss_pred eccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEc
Q psy12972 858 TTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLT 937 (1578)
Q Consensus 858 Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~ 937 (1578)
-|.++|++.+.. +.+++++|.|||+||++|+.+.|.|+++|+++.+ +.|++||++++++++++|+|.+ +||+++|+
T Consensus 7 ~s~~~f~~~l~~-~~~klvvv~F~a~wC~~Ck~~~p~~~~la~~~~~--~~f~~vd~d~~~~l~~~~~v~~-~Pt~~~~~ 82 (107)
T d1gh2a_ 7 GSDPDFQPELSG-AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQ--AVFLEVDVHQCQGTAATNNISA-TPTFQFFR 82 (107)
T ss_dssp CSGGGHHHHHHH-TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTSHHHHHHTTCCS-SSEEEEEE
T ss_pred CCHHHHHHHHHh-CCCCEEEEEEECCCCCCccccchhhhcccccccc--ccccccccccchhhhhhcCcee-ceEEEEEE
Confidence 477889887643 3478999999999999999999999999999874 7999999999999999999998 99999999
Q ss_pred CCccccccCCCCCHHHHHHHHHhhC
Q psy12972 938 DGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 938 ~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|+.+....| .+.+.|.+++++++
T Consensus 83 ~G~~v~~~~G-~~~~~l~~~i~k~l 106 (107)
T d1gh2a_ 83 NKVRIDQYQG-ADAVGLEEKIKQHL 106 (107)
T ss_dssp TTEEEEEEES-SCHHHHHHHHHHHH
T ss_pred CCEEEEEEeC-CCHHHHHHHHHHhh
Confidence 9999888878 58999999998764
|
| >d1xwaa_ c.47.1.1 (A:) Thioredoxin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.50 E-value=8.6e-15 Score=143.57 Aligned_cols=100 Identities=14% Similarity=0.329 Sum_probs=88.5
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
+.++|+..+... ++++++|.|||+||++|+.+.|.|+++++.+.+. +.++.||+++++++|++|+|++ +||+++|++
T Consensus 12 ~~~~~~~~l~~~-~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~-~~~~~i~~d~~~~l~~~~~V~~-~Pt~~~~~~ 88 (111)
T d1xwaa_ 12 DKADLDGQLTKA-SGKLVVLDFFATWCGPCKMISPKLVELSTQFADN-VVVLKVDVDECEDIAMEYNISS-MPTFVFLKN 88 (111)
T ss_dssp SHHHHHHHHHHH-TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTTCHHHHHHTTCCS-SSEEEEEET
T ss_pred CHHHHHHHHHhc-CCCEEEEEEECCcccCccccchhHHHHhhhcccc-eEEEEEEeecCcchhhcCCCcc-ccEEEEEEC
Confidence 456788766543 4789999999999999999999999999999876 9999999999999999999998 999999999
Q ss_pred CccccccCCCCCHHHHHHHHHhhC
Q psy12972 939 GRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 939 G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|+.+..+.|. +.++|.+||++++
T Consensus 89 G~~v~~~~G~-~~~~l~~~I~~~l 111 (111)
T d1xwaa_ 89 GVKVEEFAGA-NAKRLEDVIKANI 111 (111)
T ss_dssp TEEEEEEESC-CHHHHHHHHHHTC
T ss_pred CEEEEEEeCC-CHHHHHHHHHhcC
Confidence 9988777785 6688999998764
|
| >d1xfla_ c.47.1.1 (A:) Thioredoxin {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.50 E-value=6e-15 Score=145.51 Aligned_cols=100 Identities=18% Similarity=0.307 Sum_probs=88.5
Q ss_pred ccccccceeccc-CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEc
Q psy12972 859 THWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLT 937 (1578)
Q Consensus 859 t~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~ 937 (1578)
|.++|++.+.+. +.+++++|.|||+||++|+.+.|.++++++.+.+ +.++.||+++++++|++|+|++ +||+++|+
T Consensus 13 s~~~~~~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~--~~~~~vd~~~~~~l~~~~~V~~-~Pt~~~~~ 89 (114)
T d1xfla_ 13 TVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPN--VLFLKVDTDELKSVASDWAIQA-MPTFMFLK 89 (114)
T ss_dssp SHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCSS--EEEEEEETTTSHHHHHHTTCCS-SSEEEEEE
T ss_pred CHHHHHHHHHHhhccCCeEEEEEEcCCCCCccccccchhhhcccccc--cceeEEEeeeceeeccccceee-eEEEEEEE
Confidence 677787766442 4578999999999999999999999999999864 8999999999999999999998 99999999
Q ss_pred CCccccccCCCCCHHHHHHHHHhhC
Q psy12972 938 DGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 938 ~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|+.+....| .+.++|.+|+.+++
T Consensus 90 ~G~~v~~~~G-~~~~~l~~~i~k~l 113 (114)
T d1xfla_ 90 EGKILDKVVG-AKKDELQSTIAKHL 113 (114)
T ss_dssp TTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred CCEEEEEEeC-cCHHHHHHHHHHhh
Confidence 9998877777 47899999998876
|
| >d1ti3a_ c.47.1.1 (A:) Thioredoxin {European aspen (Populus tremula), thioredoxin H [TaxId: 113636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: European aspen (Populus tremula), thioredoxin H [TaxId: 113636]
Probab=99.49 E-value=5.4e-15 Score=145.55 Aligned_cols=100 Identities=19% Similarity=0.354 Sum_probs=85.7
Q ss_pred ccccccceeccc-CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEc
Q psy12972 859 THWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLT 937 (1578)
Q Consensus 859 t~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~ 937 (1578)
|.++|++.+... +.+++++|.|||+||++|+.+.|.|+++++.+.+ +.++.||+++++++|++|+|++ +||+++|+
T Consensus 11 s~e~~~~~l~~~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~vd~d~~~~l~~~~~I~~-~Pt~~~~k 87 (113)
T d1ti3a_ 11 TVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPN--VTFLKVDVDELKAVAEEWNVEA-MPTFIFLK 87 (113)
T ss_dssp SHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCSS--EEEEEEETTTCHHHHHHHHCSS-TTEEEEEE
T ss_pred CHHHHHHHHHHHHcCCCEEEEEEEcCccccchhhhhhhhhhhccCCC--ceEEeeeeeccccccccCeecc-cceEEEEE
Confidence 334444443322 4578999999999999999999999999999864 7999999999999999999998 99999999
Q ss_pred CCccccccCCCCCHHHHHHHHHhhC
Q psy12972 938 DGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 938 ~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|+.+.+..| .+.++|.+||.++.
T Consensus 88 ~G~~v~~~~G-~~~~~l~~~i~k~a 111 (113)
T d1ti3a_ 88 DGKLVDKTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp TTEEEEEEEC-CCTTHHHHHHHHHH
T ss_pred CCEEEEEEcC-CCHHHHHHHHHHHh
Confidence 9998888878 68899999998864
|
| >d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Long alpha-hairpin superfamily: Chaperone J-domain family: Chaperone J-domain domain: Large T antigen, the N-terminal J domain species: Simian virus 40, Sv40 [TaxId: 10633]
Probab=99.49 E-value=1.2e-15 Score=150.27 Aligned_cols=69 Identities=30% Similarity=0.479 Sum_probs=62.8
Q ss_pred ccCCCcccccccccC--CHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCC
Q psy12972 635 VSLDPYETLGVPRTA--SLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDG 706 (1578)
Q Consensus 635 ~~~d~y~iLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~ 706 (1578)
...|+|+||||+++| +.++||+|||+||+++||||+++ .++|++|++||++|+|+.+|+.||.++....
T Consensus 6 ~~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~---~e~F~~I~~AY~vLsd~~kR~~YD~~~~~~~ 76 (114)
T d1gh6a_ 6 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGGFWD 76 (114)
T ss_dssp HHHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCSCCCC
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhh---HHHHHHHHHHHHHhCCHHHHHHHhccCCCCc
Confidence 457899999999998 78899999999999999999976 4589999999999999999999999887654
|
| >d1g7ea_ c.47.1.7 (A:) Endoplasmic reticulum protein ERP29, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: ERP29 N domain-like domain: Endoplasmic reticulum protein ERP29, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.48 E-value=3.6e-15 Score=148.92 Aligned_cols=101 Identities=18% Similarity=0.179 Sum_probs=84.4
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCc------eEEEEEECccchhhHhHcC--cc
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG------VGFFTVHVHNEQGLARRLG--VG 927 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~------v~~a~VDc~~~~~L~~k~g--V~ 927 (1578)
++||++||++.| ++++.+||+||+|||.+|+. |.|+++|..+++.. |.++.+||+.++++|++++ |+
T Consensus 7 v~L~~~nFd~~i---~~~~~~lV~F~~~wc~~~~~--~~~~~la~~~~~~~~~~~~~V~~~~vd~~~n~~l~~~~~~~I~ 81 (122)
T d1g7ea_ 7 LPLDTVTFYKVI---PKSKFVLVKFDTQYPYGEKQ--DEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKE 81 (122)
T ss_dssp CSCSHHHHHHHG---GGSSEEEEEEECSSCCTTTT--HHHHHHHHHGGGCSSEEEEEEESCCTTSCHHHHHHHHHTCSSS
T ss_pred EECCHHhHHHHH---hhCCeEEEEEecCCcCcccC--HHHHHHHHHHHHHHHHhhhccceeeccccccHHHHHhhccccc
Confidence 579999999877 45789999999999999974 99999999997542 5556668888999999875 67
Q ss_pred ccCCcEEEEcCCcc--ccccCCCCCHHHHHHHHHhhC
Q psy12972 928 SQLPQIALLTDGRT--SFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 928 ~~~PTl~lf~~G~~--~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+ ||||++|++|+. ...|.|.++.++|++||+++.
T Consensus 82 ~-yPTi~~f~~G~~~~~~~y~G~rt~~~l~~fi~~~~ 117 (122)
T d1g7ea_ 82 S-YPVFYLFRDGDFENPVPYSGAVKVGAIQRWLKGQG 117 (122)
T ss_dssp S-CEEEEEEESSCCCCCEEEESCCCHHHHHHHHHTTS
T ss_pred C-CCeEEEEecCcccCceecCCCCCHHHHHHHHHhcc
Confidence 7 999999999863 234569999999999998863
|
| >d2hfda1 c.47.1.20 (A:1-132) Hydrogenase-1 operon protein HyaE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: HyaE-like domain: Hydrogenase-1 operon protein HyaE species: Escherichia coli [TaxId: 562]
Probab=99.48 E-value=4.7e-15 Score=149.81 Aligned_cols=106 Identities=9% Similarity=0.084 Sum_probs=96.3
Q ss_pred eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEE
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALL 936 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf 936 (1578)
.++.++|++.+. .+.+++++|.|+|+||++|+.+.|.+.++++++.+..+.+++|||+.++++|++|+|++ +||+++|
T Consensus 21 ~~~~~~~d~~~~-~~~~~vVll~f~a~wCp~C~~~~pvl~ela~~~~~~~~~~a~Vd~d~~~~la~~~~V~~-~PT~~~~ 98 (132)
T d2hfda1 21 PVSESRLDDWLT-QAPDGVVLLSSDPKRTPEVSDNPVMIGELLREFPDYTWQVAIADLEQSEAIGDRFGVFR-FPATLVF 98 (132)
T ss_dssp EECHHHHHHHHH-HCSEEEEEECSCCSCCSSSSCCTHHHHHHHTTCTTSCEEEEEECHHHHHHHHHHHTCCS-CCEEEEE
T ss_pred ccccccHHHHHH-hCCCcEEEEEeeCCCChhHHHHHHHHHHHHHHccCCcceeEEEEecCCHHHHHhhccCc-ceeEEEE
Confidence 467888888654 34567899999999999999999999999999988768999999999999999999998 9999999
Q ss_pred cCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 937 TDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 937 ~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
++|+.+..+.|.++.+++.+++...+.+
T Consensus 99 ~~G~~v~~~~G~~~~~~l~~~i~~ll~~ 126 (132)
T d2hfda1 99 TGGNYRGVLNGIHPWAELINLMRGLVEP 126 (132)
T ss_dssp ETTEEEEEECCCSCHHHHHHHHHHHHSC
T ss_pred EcCcEeeeecCCCCHHHHHHHHHHHhCc
Confidence 9999998899999999999999988765
|
| >d1r26a_ c.47.1.1 (A:) Thioredoxin {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Trypanosoma brucei [TaxId: 5691]
Probab=99.47 E-value=1.5e-14 Score=142.31 Aligned_cols=97 Identities=19% Similarity=0.232 Sum_probs=85.1
Q ss_pred eccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEc
Q psy12972 858 TTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLT 937 (1578)
Q Consensus 858 Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~ 937 (1578)
.|.++|++.+ +.+++++|+|||+||++|+.+.|.++++++++. ++.|++||+++++++|++|||.+ +||+++|+
T Consensus 14 ~s~~~~~~~~---~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~~~~l~~~~~V~~-~Pt~~~~~ 87 (113)
T d1r26a_ 14 YSVEQFRNIM---SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADNNSEIVSKCRVLQ-LPTFIIAR 87 (113)
T ss_dssp CCHHHHHHHH---HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCS-SSEEEEEE
T ss_pred CCHHHHHHHH---cCCCeEEEEEECCCCccchhhceeccccccccc--cccccccccccchhhHHHccccC-CCEEEEEE
Confidence 3667788766 457899999999999999999999999999986 38999999999999999999998 99999999
Q ss_pred CCccccccCCCCCHHHHHHHHHhh
Q psy12972 938 DGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 938 ~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
+|+.+....|. +.+.+.+++.+.
T Consensus 88 ~G~~v~~~~G~-~~~~l~~~l~~~ 110 (113)
T d1r26a_ 88 SGKMLGHVIGA-NPGMLRQKLRDI 110 (113)
T ss_dssp TTEEEEEEESS-CHHHHHHHHHHH
T ss_pred CCEEEEEEeCC-CHHHHHHHHHHH
Confidence 99988777784 667788777654
|
| >d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Long alpha-hairpin superfamily: Chaperone J-domain family: Chaperone J-domain domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.46 E-value=1.3e-14 Score=137.39 Aligned_cols=69 Identities=30% Similarity=0.687 Sum_probs=62.7
Q ss_pred ccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC-------hhHHHHHHHHHHHHHHcCCHHHHHhccccCC
Q psy12972 635 VSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND-------PTAQEKFLQLTEAYNILSDAERRKQYDLFGT 703 (1578)
Q Consensus 635 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-------~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~ 703 (1578)
...|+|+||||++++|.++||+||++++++|||||++. +.++++|+.|++||++|+||.+|+.||....
T Consensus 14 ~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~~~ 89 (94)
T d1wjza_ 14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred hccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHccC
Confidence 35799999999999999999999999999999999864 4477889999999999999999999997544
|
| >d1fo5a_ c.47.1.1 (A:) MJ0307, thioredoxin/glutaredoxin-like protein {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: MJ0307, thioredoxin/glutaredoxin-like protein species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.45 E-value=3e-14 Score=132.68 Aligned_cols=84 Identities=19% Similarity=0.283 Sum_probs=75.6
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHH
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQ 952 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~ 952 (1578)
+++.++.|||+||++|+.+.|.|+++++.+.+. +.+..+|+++++++|++|+|++ +||++++++|+ +.|.++.+
T Consensus 2 ~kv~v~~F~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~~~~d~~~~la~~~~V~~-~Pt~~i~~~g~----~~G~~~~~ 75 (85)
T d1fo5a_ 2 SKVKIELFTSPMCPHCPAAKRVVEEVANEMPDA-VEVEYINVMENPQKAMEYGIMA-VPTIVINGDVE----FIGAPTKE 75 (85)
T ss_dssp CCEEEEEEECCCSSCCCTHHHHHHHHHHHCSSS-EEEEEEESSSSCCTTTSTTTCC-SSEEEETTEEE----CCSSSSSH
T ss_pred CceEEEEEECCCCcChHhhhhhccccccccccc-cccccccccccccccccCCceE-eeEEEEECCcE----EECCCCHH
Confidence 467799999999999999999999999998765 8999999999999999999998 99999988875 24888999
Q ss_pred HHHHHHHhhC
Q psy12972 953 KMVEFFRLKL 962 (1578)
Q Consensus 953 ~L~~fi~~~l 962 (1578)
+|.+||++++
T Consensus 76 ~l~~~i~~~L 85 (85)
T d1fo5a_ 76 ALVEAIKKRL 85 (85)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcC
Confidence 9999998764
|
| >d2es7a1 c.47.1.20 (A:7-125) Hydrogenase-1 operon protein HyaE {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: HyaE-like domain: Hydrogenase-1 operon protein HyaE species: Salmonella typhimurium [TaxId: 90371]
Probab=99.44 E-value=2.2e-14 Score=142.41 Aligned_cols=104 Identities=10% Similarity=0.090 Sum_probs=80.5
Q ss_pred eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEE
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALL 936 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf 936 (1578)
.++..++++.+. ...++++++.|+++||++|+.++|.+.++++++.+..+.+++||++.++++|++|||++ +||+++|
T Consensus 15 ~v~~~~ld~~~~-~~~~~~vll~f~a~wCp~C~~~~pvl~eL~~~~~~~~~~~~~Vd~d~~~~l~~~~~V~~-~Pt~~~~ 92 (119)
T d2es7a1 15 PVEASTVDDWIK-RVGDGVILLSSDPRRTPEVSDNPVMIAELLREFPQFDWQVAVADLEQSEAIGDRFNVRR-FPATLVF 92 (119)
T ss_dssp ECCCC---------CCSEEEEECCCSCC----CCHHHHHHHHHHTCTTSCCEEEEECHHHHHHHHHTTTCCS-SSEEEEE
T ss_pred eecccCHHHHHH-hCCCcEEEEeecCCCCccHHHHHHHHHHHHHhcCCCceEEEEEECCCCHHHHHhcCcCc-ceEEEEE
Confidence 467778887654 34578999999999999999999999999999988669999999999999999999998 9999999
Q ss_pred cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 937 TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 937 ~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
++|+......|.++.++++++++..+
T Consensus 93 ~~G~~v~~~~G~~~~~~l~~~i~~lL 118 (119)
T d2es7a1 93 TDGKLRGALSGIHPWAELLTLMRSIV 118 (119)
T ss_dssp SCC----CEESCCCHHHHHHHHHHHH
T ss_pred EcCeEEEEeeCCCCHHHHHHHHHHHh
Confidence 99999888889999999999998653
|
| >d1a8la2 c.47.1.2 (A:120-226) Protein disulfide isomerase, PDI {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: PDI-like domain: Protein disulfide isomerase, PDI species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.43 E-value=6e-14 Score=136.33 Aligned_cols=101 Identities=14% Similarity=0.092 Sum_probs=82.4
Q ss_pred eccccccceecccCCCCc-EEEEEEcCCCcccccccHHHHHHHHHh---CCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 858 TTHWNFEKNYIPKSYTTP-HLILFYSDWCFACLQVEPIFKKLMDEL---SPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 858 Lt~~nF~~~vl~~s~~~~-~LV~FyapwCg~Ck~l~p~~~~lA~~l---~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
|++++++... ..+++ .++.||+|||++|+++.|.++++|.+. .+..|.+..+|+++++++|++|+|.+ +||+
T Consensus 2 l~~~~~e~~~---~~~~~v~i~~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~v~~~~id~~~~~~l~~~~~V~~-vPTi 77 (107)
T d1a8la2 2 LMDETKQAIR---NIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMA-VPKI 77 (107)
T ss_dssp CCHHHHHHHT---TCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCS-SCEE
T ss_pred CCHHHHHHHH---hcCCCeEEEEEEcCccccchhhChhHHhhhhhhhhccCCcEEEEEecccccccccccccccc-ceEE
Confidence 4455554322 22444 566799999999999999999998753 22339999999999999999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+++++|+....+.|.++.+.+.+++++.+
T Consensus 78 ~i~~~G~~~~~~~G~~~~~~~~~~i~~al 106 (107)
T d1a8la2 78 VIQVNGEDRVEFEGAYPEKMFLEKLLSAL 106 (107)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEeCCeEEEEEECCCCHHHHHHHHHHhh
Confidence 99999998877789999999999998764
|
| >d1qgva_ c.47.1.8 (A:) spliceosomal protein U5-15Kd {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: spliceosomal protein U5-15Kd domain: spliceosomal protein U5-15Kd species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=5.5e-14 Score=142.71 Aligned_cols=86 Identities=8% Similarity=0.273 Sum_probs=74.9
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
+..+|++.+.. +.+++++|.|||+||++|+++.|.++++|+++.+. +.|++||++++++++++|+|++ +||+++|++
T Consensus 9 s~~~~dq~i~~-~~~k~vvv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~VDvd~~~~la~~~~I~~-~PT~~~f~~ 85 (137)
T d1qgva_ 9 NGWQVDQAILS-EEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDITEVPDFNKMYELYD-PCTVMFFFR 85 (137)
T ss_dssp SHHHHHHHHHT-CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETTTCCTTTTSSCSCS-SCEEEEEET
T ss_pred CHHHHHHHHHh-CCCCEEEEEEECCCCccchhcChHHHHHHHHhhcc-ceEEEeeccccchhhhhcCeee-EEEEEEEeC
Confidence 44567776653 34789999999999999999999999999999876 9999999999999999999998 999999999
Q ss_pred CccccccCC
Q psy12972 939 GRTSFFKEP 947 (1578)
Q Consensus 939 G~~~~y~~G 947 (1578)
|+.+....|
T Consensus 86 g~~i~~~~g 94 (137)
T d1qgva_ 86 NKHIMIDLG 94 (137)
T ss_dssp TEEEEEECC
T ss_pred CcEEEEEec
Confidence 987644334
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.37 E-value=4.1e-13 Score=153.67 Aligned_cols=144 Identities=17% Similarity=0.223 Sum_probs=103.6
Q ss_pred ChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHH
Q psy12972 398 THSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVP 476 (1578)
Q Consensus 398 ~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 476 (1578)
++++.|+-. +.||+|++|.||+|+.+ +|+.||||+....-...+
T Consensus 9 ~p~d~Y~i~--~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~--------------------------------- 53 (288)
T d2jfla1 9 NPEDFWEII--GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL--------------------------------- 53 (288)
T ss_dssp CGGGTEEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGG---------------------------------
T ss_pred CcccCeEEe--EEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHH---------------------------------
Confidence 356666555 57999999999999965 799999999864322110
Q ss_pred HHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HH
Q psy12972 477 LEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 477 l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~ 554 (1578)
-.|.+|++.+.++. +..-|.+=.++.+ ...-.|||||++|.+|.++..-...+++...+...+.+++ ++
T Consensus 54 ----~~~~~E~~il~~l~----HpnIv~l~~~~~~-~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ 124 (288)
T d2jfla1 54 ----EDYMVEIDILASCD----HPNIVKLLDAFYY-ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 124 (288)
T ss_dssp ----GGTHHHHHHHHHCC----CTTBCCEEEEEEE-TTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHhCC----CCCCCeEEEEEee-CCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 02456777776653 3333444444422 3445799999999999887433345688877777666666 78
Q ss_pred HHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
.+|..|++|||+||.|||+. .++++|||...
T Consensus 125 ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~ 158 (288)
T d2jfla1 125 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA 158 (288)
T ss_dssp HHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred HHHHCCEEEeecChhheeECCCCCEEEEechhhh
Confidence 89999999999999999964 69999999764
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.35 E-value=7.5e-13 Score=151.83 Aligned_cols=142 Identities=15% Similarity=0.162 Sum_probs=101.4
Q ss_pred hhhccccCCcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHH
Q psy12972 400 SQLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLE 478 (1578)
Q Consensus 400 ~~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 478 (1578)
.+-|.-+ +.||.|++|.||+|+. .+|+.||||+.+..-... .
T Consensus 19 ~~~Y~~~--~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~-----------------------~------------ 61 (293)
T d1yhwa1 19 KKKYTRF--EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-----------------------K------------ 61 (293)
T ss_dssp TTTBCSC--EECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSC-----------------------H------------
T ss_pred ccccEEE--EEEecCcCcEEEEEEECCCCCEEEEEEEecccChH-----------------------H------------
Confidence 4446555 5699999999999996 489999999975321100 0
Q ss_pred HHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHH
Q psy12972 479 QELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQI 556 (1578)
Q Consensus 479 ~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i 556 (1578)
-.+.+|++.++++. +..-|.+=.++. ....-+|||||++|..|.++ +...+++...+...+.+++ ++.+
T Consensus 62 --~~~~~E~~il~~l~----HpnIv~~~~~~~-~~~~~~ivmEy~~gg~L~~~--~~~~~l~~~~~~~i~~qi~~aL~yL 132 (293)
T d1yhwa1 62 --ELIINEILVMRENK----NPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQALEFL 132 (293)
T ss_dssp --HHHHHHHHHHHHCC----CTTBCCEEEEEE-ETTEEEEEEECCTTCBHHHH--HHHSCCCHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHhCC----CCCEeeEeEEEE-ECCEEEEEEEecCCCcHHHH--hhccCCCHHHHHHHHHHHHHHHHHH
Confidence 02456776666543 333233333332 23445799999999999876 3456788888777777766 8899
Q ss_pred HHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 557 FQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 557 ~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|..|++|||+||.|||++ .++++|||....+
T Consensus 133 H~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~ 166 (293)
T d1yhwa1 133 HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166 (293)
T ss_dssp HHTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred HHCCCcccCCcHHHeEECCCCcEeeccchhheee
Confidence 999999999999999964 6999999986543
|
| >d1nhoa_ c.47.1.1 (A:) MTH807, thioredoxin/glutaredoxin-like protein {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: MTH807, thioredoxin/glutaredoxin-like protein species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=99.34 E-value=3.6e-13 Score=125.36 Aligned_cols=81 Identities=16% Similarity=0.203 Sum_probs=71.1
Q ss_pred EEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHH
Q psy12972 876 HLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMV 955 (1578)
Q Consensus 876 ~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~ 955 (1578)
.++.||||||+||+++.|.|+++++++.+. +.++++|+++++++|++|||.+ +||++++ |+. .+.|.++.+.|.
T Consensus 4 ~v~~F~a~wC~~C~~~~p~~~~l~~~~~~~-v~~~~vd~d~~~~l~~~~~V~~-~Pt~~~~--~~~--~~~G~~~~~~l~ 77 (85)
T d1nhoa_ 4 NIEVFTSPTCPYCPMAIEVVDEAKKEFGDK-IDVEKIDIMVDREKAIEYGLMA-VPAIAIN--GVV--RFVGAPSREELF 77 (85)
T ss_dssp CEEEESCSSSCCSTTHHHHHHHHHHHHCSS-CCEEEECTTTCGGGGGGTCSSC-SSEEEET--TTE--EEECSSCCHHHH
T ss_pred EEEEEECCCCcchHHHHHHHhhhccccccc-ccccccccccchhhHHhcCceE-eCEEEEC--CcE--EEEcCCCHHHHH
Confidence 356699999999999999999999999875 9999999999999999999998 9998774 432 234889999999
Q ss_pred HHHHhhC
Q psy12972 956 EFFRLKL 962 (1578)
Q Consensus 956 ~fi~~~l 962 (1578)
+||++.+
T Consensus 78 ~~i~~~l 84 (85)
T d1nhoa_ 78 EAINDEM 84 (85)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 9998865
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=99.34 E-value=7.3e-13 Score=155.87 Aligned_cols=136 Identities=18% Similarity=0.180 Sum_probs=97.5
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.+..... | +-.+.+|+
T Consensus 35 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~----~---------------------------------~~~~~~Ei 77 (352)
T d1koba_ 35 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL----D---------------------------------KYTVKNEI 77 (352)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH----H---------------------------------HHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEECCcchh----H---------------------------------HHHHHHHH
Confidence 6899999999999996 48999999987643211 1 01234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+..-|.+-.++. ....-+|||||++|.+|.+...-...+++..++...+.+++ +..+|..|++|||
T Consensus 78 ~il~~l----~HpnIv~~~~~~~-~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRD 152 (352)
T d1koba_ 78 SIMNQL----HHPKLINLHDAFE-DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLD 152 (352)
T ss_dssp HHHTTC----CSTTBCCEEEEEE-CSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhC----CCCCCCcEEEEEE-ECCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence 666554 3333344444432 23445799999999999775433334578888777777766 8889999999999
Q ss_pred CCCCCCCCC-----eeEEecCCchhh
Q psy12972 566 PHSGNDVNT-----WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~-----~v~liDfG~~~~ 586 (1578)
+||.|||+. .++++|||....
T Consensus 153 iKp~NILl~~~~~~~vkL~DFGla~~ 178 (352)
T d1koba_ 153 IKPENIMCETKKASSVKIIDFGLATK 178 (352)
T ss_dssp CCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred cccccccccccCCCeEEEeeccccee
Confidence 999999964 589999997643
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.34 E-value=9.7e-13 Score=148.47 Aligned_cols=135 Identities=17% Similarity=0.103 Sum_probs=97.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|+||+|++++|+.||||+.+.+... +-+|.+|++
T Consensus 11 ~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~--------------------------------------~~~~~~E~~ 52 (263)
T d1sm2a_ 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--------------------------------------EEDFIEEAE 52 (263)
T ss_dssp EEEECCSSCCEEEEEETTTEEEEEEECCSSSSC--------------------------------------HHHHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCEEEEEEECCCcCc--------------------------------------HHHHHHHHH
Confidence 569999999999999999999999998653211 013677888
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.+++ |..-|.+=.++. ....-+|||||++|.+|.++..-....++.+.+...+.++. ++.+|..|++|||+
T Consensus 53 ~l~~l~----HpnIv~~~g~~~-~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDl 127 (263)
T d1sm2a_ 53 VMMKLS----HPKLVQLYGVCL-EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 127 (263)
T ss_dssp HHHHCC----CTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTC
T ss_pred HHHhcC----CCCcccccceec-cCCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeeccc
Confidence 887763 333344444432 23567899999999999887443334566666666555555 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchhh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~~ 586 (1578)
+|.|||+. .+++.|||....
T Consensus 128 Kp~Nill~~~~~~Kl~DFGla~~ 150 (263)
T d1sm2a_ 128 AARNCLVGENQVIKVSDFGMTRF 150 (263)
T ss_dssp SGGGEEECGGGCEEECSCC----
T ss_pred chhheeecCCCCeEecccchhee
Confidence 99999975 599999997643
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=1.4e-12 Score=147.36 Aligned_cols=137 Identities=15% Similarity=0.087 Sum_probs=97.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+..+..... + ..+-.+.+|+
T Consensus 12 ~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~---~-------------------------------~~~~~~~~E~ 57 (263)
T d2j4za1 12 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEK---A-------------------------------GVEHQLRREV 57 (263)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH---T-------------------------------TCHHHHHHHH
T ss_pred EEEecCCCcEEEEEEECCCCcEEEEEEEchHHccC---h-------------------------------HHHHHHHHHH
Confidence 68999999999999975 79999999986532110 0 0011245666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-|.+=.++. -...-+|||||++|.+|.+... ....++...+...+.+++ ++.+|..|++|||
T Consensus 58 ~il~~l~----hpnIv~~~~~~~-~~~~~~ivmEy~~~g~L~~~l~-~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrD 131 (263)
T d2j4za1 58 EIQSHLR----HPNILRLYGYFH-DATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYCHSKRVIHRD 131 (263)
T ss_dssp HHHHTCC----CTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHhcC----CCCCCeEEEEEE-ECCEEEEEEeecCCCcHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeee
Confidence 6665542 333344434443 2334579999999999987643 345678777777666666 8889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||++ .++++|||...
T Consensus 132 iKp~Nill~~~~~~kl~DFG~a~ 154 (263)
T d2j4za1 132 IKPENLLLGSAGELKIADFGWSV 154 (263)
T ss_dssp CCGGGEEECTTSCEEECCCCSCS
T ss_pred eccccceecCCCCEeecccceee
Confidence 999999964 59999999763
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=2.8e-12 Score=146.40 Aligned_cols=136 Identities=16% Similarity=0.172 Sum_probs=99.0
Q ss_pred ccccccceEEEEEEec---CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 410 PIAAASLAQVFRAVTK---EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~---~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
-||.|++|.||+|+.+ ++..||||+.+++.... + .-+|.+|
T Consensus 16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~---~---------------------------------~~~~~~E 59 (285)
T d1u59a_ 16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA---D---------------------------------TEEMMRE 59 (285)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHH---H---------------------------------HHHHHHH
T ss_pred EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHH---H---------------------------------HHHHHHH
Confidence 4999999999999864 46689999987654221 0 0135778
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
++.+.+++ +..-|.+=.+.. +..-+|||||++|.+|.++..-....++...+...+.++. ++.+|..|++||
T Consensus 60 ~~il~~l~----HpnIv~l~g~~~--~~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHr 133 (285)
T d1u59a_ 60 AQIMHQLD----NPYIVRLIGVCQ--AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 133 (285)
T ss_dssp HHHHHHCC----CTTBCCEEEEEE--SSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHhCC----CCCEeeEeeeec--cCeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 87777653 333344433332 2456799999999999887433344578777777777766 888999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|++|.|||+. .+++.|||....+
T Consensus 134 DlKp~Nill~~~~~~Kl~DFGla~~~ 159 (285)
T d1u59a_ 134 DLAARNVLLVNRHYAKISDFGLSKAL 159 (285)
T ss_dssp CCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred cCchhheeeccCCceeeccchhhhcc
Confidence 9999999965 5999999976543
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=9e-13 Score=149.49 Aligned_cols=135 Identities=18% Similarity=0.139 Sum_probs=95.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||+|++|.||+|+.+ +|+.||||+....-.. +. .-++.+|+
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~------------------------------~~------~~~~~~Ei 54 (271)
T d1nvra_ 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV------------------------------DC------PENIKKEI 54 (271)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------------------------------------------CHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc------------------------------hH------HHHHHHHH
Confidence 57999999999999975 7999999997532110 00 01346677
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-|.+=..+.+ .+.-+|||||++|.+|.+... ....++..++...+.+++ ++.+|..|++|||
T Consensus 55 ~~l~~l~----HpnIv~~~~~~~~-~~~~~ivmEy~~gg~L~~~l~-~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrD 128 (271)
T d1nvra_ 55 CINKMLN----HENVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 128 (271)
T ss_dssp HHHHTCC----CTTBCCEEEEEEE-TTEEEEEEECCTTEEGGGGSB-TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHhCC----CCCEeeEeeeecc-CceeEEEEeccCCCcHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCc
Confidence 7666553 3333333333322 234569999999999988743 234577777766666666 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 129 iKp~NILl~~~~~~KL~DFG~a~ 151 (271)
T d1nvra_ 129 IKPENLLLDERDNLKISDFGLAT 151 (271)
T ss_dssp CCGGGEEECTTCCEEECCCTTCE
T ss_pred ccHHHEEECCCCCEEEccchhhe
Confidence 999999964 59999999764
|
| >d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Long alpha-hairpin superfamily: Chaperone J-domain family: Chaperone J-domain domain: Large T antigen, the N-terminal J domain species: Murine polyomavirus [TaxId: 10634]
Probab=99.32 E-value=2.1e-13 Score=123.92 Aligned_cols=68 Identities=22% Similarity=0.323 Sum_probs=61.0
Q ss_pred cccCCCcccccccccC--CHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 634 AVSLDPYETLGVPRTA--SLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 634 ~~~~d~y~iLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
....++|+||||++++ |.++||+|||+++++||||++++ .++|++|++||++|+|+.+|..||..+..
T Consensus 8 ~~~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g~---~e~~~~in~Ay~~L~d~~~r~~~~~~~~~ 77 (79)
T d1fafa_ 8 ADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS---HALMQELNSLWGTFKTEVYNLRMNLGGTG 77 (79)
T ss_dssp HHHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC---HHHHHHHHHHHHHHHHHHHHHTTCCSSCC
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCCC---HHHHHHHHHHHHHHCCHHHHHHHccCCCC
Confidence 4457899999999987 99999999999999999999866 57899999999999999999999986543
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=99.32 E-value=8.5e-13 Score=155.14 Aligned_cols=136 Identities=17% Similarity=0.178 Sum_probs=98.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+....-.. + .-.+.+|+
T Consensus 32 ~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~----~---------------------------------~~~~~~E~ 74 (350)
T d1koaa2 32 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHES----D---------------------------------KETVRKEI 74 (350)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECCCSHH----H---------------------------------HHHHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEcccchh----h---------------------------------HHHHHHHH
Confidence 57999999999999964 8999999997542111 1 01245677
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.+++ +..-|.+=.++.+ ...-+|||||++|.+|.+...-....++...+...+.+++ ++.+|..|++|||
T Consensus 75 ~il~~l~----HpnIv~~~~~~~~-~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrD 149 (350)
T d1koaa2 75 QTMSVLR----HPTLVNLHDAFED-DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLD 149 (350)
T ss_dssp HHHHHTC----CTTBCCEEEEEEE-TTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhCC----CCCCCcEEEEEEE-CCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeee
Confidence 7776663 3333444444432 3456899999999999876432334578877777766666 8889999999999
Q ss_pred CCCCCCCC-----CeeEEecCCchhh
Q psy12972 566 PHSGNDVN-----TWLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv-----~~v~liDfG~~~~ 586 (1578)
+||.|||+ +.++++|||....
T Consensus 150 iKp~NIll~~~~~~~vkL~DFG~a~~ 175 (350)
T d1koaa2 150 LKPENIMFTTKRSNELKLIDFGLTAH 175 (350)
T ss_dssp CCGGGEEESSTTSCCEEECCCTTCEE
T ss_pred echhHeeeccCCCCeEEEeecchhee
Confidence 99999996 2589999997643
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=1.3e-12 Score=148.14 Aligned_cols=133 Identities=15% Similarity=0.113 Sum_probs=97.8
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|++++|+.||||+.+.+... +-.|.+|++
T Consensus 19 ~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~--------------------------------------~~~~~~E~~ 60 (272)
T d1qpca_ 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS--------------------------------------PDAFLAEAN 60 (272)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTSSC--------------------------------------HHHHHHHHH
T ss_pred EEEecCCCcEEEEEEECCCCEEEEEEEccCcCC--------------------------------------HHHHHHHHH
Confidence 569999999999999999999999988643210 002567887
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH-hhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL-LEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l-~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.+++ +..-|.+-.+.. ...-.|||||++|.+|.+.... ....++...+...+.++. +..+|..|++|||
T Consensus 61 ~l~~l~----HpnIv~~~g~~~--~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrD 134 (272)
T d1qpca_ 61 LMKQLQ----HQRLVRLYAVVT--QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134 (272)
T ss_dssp HHHHCC----CTTBCCEEEEEC--SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHhCC----CCCEeEEEeeec--cCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCc
Confidence 777764 333344433331 2345799999999999875432 233577777777666666 8889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .+++.|||...
T Consensus 135 iKp~NIll~~~~~~Kl~DFGla~ 157 (272)
T d1qpca_ 135 LRAANILVSDTLSCKIADFGLAR 157 (272)
T ss_dssp CSGGGEEECTTSCEEECCCTTCE
T ss_pred cchhheeeecccceeeccccceE
Confidence 999999975 58999999864
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.31 E-value=1e-12 Score=148.86 Aligned_cols=149 Identities=18% Similarity=0.099 Sum_probs=100.0
Q ss_pred CCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHH
Q psy12972 396 GCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELK 474 (1578)
Q Consensus 396 G~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~ 474 (1578)
|...+.-|-.|+. -||.|++|.||+|+.+ +|+.||||+....-.. ..+
T Consensus 3 g~~~~gry~~~~~-~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~--~~~---------------------------- 51 (270)
T d1t4ha_ 3 GMSNDGRFLKFDI-EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT--KSE---------------------------- 51 (270)
T ss_dssp EECTTSCEEEEEE-EEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--HHH----------------------------
T ss_pred CcCCCCCEEEeee-EEecCcCcEEEEEEECCCCeEEEEEEEchhhCC--HHH----------------------------
Confidence 3444555656654 4999999999999965 7999999987542110 000
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCC-Cc--eEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHH
Q psy12972 475 VPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKS-ST--RVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTA 551 (1578)
Q Consensus 475 ~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~-t~--~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~ 551 (1578)
.-+|.+|++.+.++ .+..-|.+=.++.+.. ++ -+|||||++|.+|.++.. ....++...+...+.++
T Consensus 52 -----~~~~~~E~~il~~l----~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~-~~~~~~~~~~~~~~~qi 121 (270)
T d1t4ha_ 52 -----RQRFKEEAEMLKGL----QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK-RFKVMKIKVLRSWCRQI 121 (270)
T ss_dssp -----HHHHHHHHHHHTTC----CCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHhC----CCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHh-ccccccHHHHHHHHHHH
Confidence 01356677766554 3333344433332211 11 269999999999988743 33457766666655565
Q ss_pred H--HHHHHHcC--ccccCCCCCCCCCC----eeEEecCCchh
Q psy12972 552 F--AEQIFQTG--FVHADPHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 552 ~--l~~i~~~G--~vH~DpHPGNilv~----~v~liDfG~~~ 585 (1578)
+ ++.+|..| ++|||+||+|||+. .++++|||...
T Consensus 122 ~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~ 163 (270)
T d1t4ha_ 122 LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 163 (270)
T ss_dssp HHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred HHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcce
Confidence 5 77889999 99999999999973 58999999863
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=1.6e-12 Score=147.76 Aligned_cols=139 Identities=14% Similarity=0.128 Sum_probs=98.9
Q ss_pred ccCCcccccccceEEEEEEec---CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHH
Q psy12972 405 SFDENPIAAASLAQVFRAVTK---EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQEL 481 (1578)
Q Consensus 405 ~fd~~PlasaSiaQVhrA~l~---~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 481 (1578)
.+|++-||.|++|+||+|+++ +++.||||+.+...... +. .-
T Consensus 9 ~le~k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~-----------------------------~~------~~ 53 (277)
T d1xbba_ 9 TLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP-----------------------------AL------KD 53 (277)
T ss_dssp EEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----C-----------------------------HH------HH
T ss_pred eecCCCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCH-----------------------------HH------HH
Confidence 466678999999999999865 45789999986432210 00 11
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 482 DFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 482 Df~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
.|.+|++.+.+++ +..-|.+=.+.. ....+|||||++|.+|.++.. ....++...+...+.++. ++.+|..
T Consensus 54 ~~~~E~~il~~l~----HpnIv~~~g~~~--~~~~~lvmE~~~~g~L~~~l~-~~~~l~~~~~~~i~~qi~~gl~ylH~~ 126 (277)
T d1xbba_ 54 ELLAEANVMQQLD----NPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLEES 126 (277)
T ss_dssp HHHHHHHHHHTCC----CTTBCCEEEEEE--SSSEEEEEECCTTEEHHHHHH-HCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCC----CCCCceEEEEec--cCCEEEEEEcCCCCcHHHHHh-hccCCCHHHHHHHHHHHHHHHhhHHhC
Confidence 3567777776653 333344434432 345689999999999988743 334578777777777666 8889999
Q ss_pred CccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 560 GFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 560 G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|||++|.|||+. .+++.|||...
T Consensus 127 ~iiHrDlKp~Nill~~~~~~kl~DFGla~ 155 (277)
T d1xbba_ 127 NFVHRDLAARNVLLVTQHYAKISDFGLSK 155 (277)
T ss_dssp TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred CcccCCCcchhhcccccCcccccchhhhh
Confidence 999999999999964 58999999764
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.30 E-value=2e-12 Score=147.87 Aligned_cols=134 Identities=19% Similarity=0.148 Sum_probs=96.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+.+... . -+|.+|+
T Consensus 23 ~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~------------------------~--------------~~~~~E~ 64 (287)
T d1opja_ 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME------------------------V--------------EEFLKEA 64 (287)
T ss_dssp EETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSC------------------------H--------------HHHHHHH
T ss_pred eEEeeCCCeEEEEEEECCCCeEEEEEEECCccch------------------------H--------------HHHHHHH
Confidence 57999999999999976 6999999997643211 0 0356788
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH-hhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL-LEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l-~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.+++ |..-|.+=.++. -...-+|||||++|.++.+...- ....++...+...+.++. ++.+|..|++||
T Consensus 65 ~il~~l~----HpnIv~~~~~~~-~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHr 139 (287)
T d1opja_ 65 AVMKEIK----HPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 139 (287)
T ss_dssp HHHHHCC----CTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHhCC----CCCEecCCccEe-eCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 7777763 333344333332 23456799999999998876432 123566666666666655 889999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+||.|||++ .+++.|||...
T Consensus 140 DlKp~NILl~~~~~~Kl~DFG~a~ 163 (287)
T d1opja_ 140 DLAARNCLVGENHLVKVADFGLSR 163 (287)
T ss_dssp CCSGGGEEECGGGCEEECCCCCTT
T ss_pred ccccCeEEECCCCcEEEcccccee
Confidence 9999999975 58999999763
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.30 E-value=1.6e-12 Score=150.15 Aligned_cols=146 Identities=18% Similarity=0.201 Sum_probs=104.2
Q ss_pred ChhhhccccCCcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHH
Q psy12972 398 THSQLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVP 476 (1578)
Q Consensus 398 ~~~~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 476 (1578)
++++.|+.+ +.||.|++|.||+|+. .+|+.||||+.+...... + +
T Consensus 12 dp~~~y~~l--~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~---~-------------------------~---- 57 (309)
T d1u5ra_ 12 DPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS---N-------------------------E---- 57 (309)
T ss_dssp CHHHHEEEE--EEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCH---H-------------------------H----
T ss_pred CcHHhcEee--EEEecCCCeEEEEEEECCCCcEEEEEEEchhhccC---H-------------------------H----
Confidence 467778877 6799999999999995 489999999986532110 0 0
Q ss_pred HHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HH
Q psy12972 477 LEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 477 l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~ 554 (1578)
..-++.+|++.+.++ .|..-|.+=.++.+ ...-+|||||++|..+.... ....+++...+...+.+++ +.
T Consensus 58 --~~~~~~~Ei~il~~l----~HpnIv~~~~~~~~-~~~~~iv~E~~~~g~l~~~~-~~~~~l~e~~~~~i~~qi~~aL~ 129 (309)
T d1u5ra_ 58 --KWQDIIKEVRFLQKL----RHPNTIQYRGCYLR-EHTAWLVMEYCLGSASDLLE-VHKKPLQEVEIAAVTHGALQGLA 129 (309)
T ss_dssp --HHHHHHHHHHHHTTC----CCTTBCCEEEEEEE-TTEEEEEEECCSEEHHHHHH-HHTSCCCHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHC----CCCCEeeEEEEEEE-CCEEEEEEEecCCCchHHHH-HhCCCCCHHHHHHHHHHHHHHHH
Confidence 001345677666655 33333444444432 24457999999998885443 3446688877777776666 88
Q ss_pred HHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
.+|..|++|||+||.|||+. .++++|||...
T Consensus 130 yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~ 163 (309)
T d1u5ra_ 130 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSAS 163 (309)
T ss_dssp HHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCB
T ss_pred HHHhCCEeccCCCcceEEECCCCCEEEeeccccc
Confidence 89999999999999999964 59999999764
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.29 E-value=3.2e-12 Score=145.30 Aligned_cols=145 Identities=16% Similarity=0.098 Sum_probs=101.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+..-..... . .-..+.. -.+.+|+
T Consensus 9 ~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~---------------------~-~~~~~~~------~~~~~E~ 60 (277)
T d1phka_ 9 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFS---------------------A-EEVQELR------EATLKEV 60 (277)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCC---------------------H-HHHHHHH------HHHHHHH
T ss_pred eEEecCcCeEEEEEEECCCCCEEEEEEEecccccchh---------------------H-HHHHHHH------HHHHHHH
Confidence 67999999999999964 8999999997643211100 0 0001111 2346788
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++.. +..-|.+-.++.+ ...-+|||||++|.+|.++.. ....++...+...+.+++ ++.+|..|++|+|
T Consensus 61 ~~l~~l~~---hpnIv~~~~~~~~-~~~~~ivmE~~~~g~L~~~l~-~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrD 135 (277)
T d1phka_ 61 DILRKVSG---HPNIIQLKDTYET-NTFFFLVFDLMKKGELFDYLT-EKVTLSEKETRKIMRALLEVICALHKLNIVHRD 135 (277)
T ss_dssp HHHHHHTT---CTTBCCEEEEEEC-SSEEEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHHhcC---CCCeEEEEeeccc-CcceEEEEEcCCCchHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccc
Confidence 88888752 1222344444432 233479999999999998754 345678777777776666 8899999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 136 lkp~Nill~~~~~~kl~DFG~a~~ 159 (277)
T d1phka_ 136 LKPENILLDDDMNIKLTDFGFSCQ 159 (277)
T ss_dssp CSGGGEEECTTCCEEECCCTTCEE
T ss_pred cccceEEEcCCCCeEEccchheeE
Confidence 999999975 589999998644
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.29 E-value=1.8e-12 Score=149.68 Aligned_cols=144 Identities=18% Similarity=0.175 Sum_probs=96.6
Q ss_pred ChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHH
Q psy12972 398 THSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVP 476 (1578)
Q Consensus 398 ~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 476 (1578)
++.+.|.-. +.||.|++|.||+|+.+ +|+.||||+........
T Consensus 6 di~d~Y~~~--~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~---------------------------------- 49 (307)
T d1a06a_ 6 DIRDIYDFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG---------------------------------- 49 (307)
T ss_dssp CGGGTEEEE--EESBSGGGGGEEEEEETTTCCEEEEEEEEC---------------------------------------
T ss_pred CCccceEEE--EEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhh----------------------------------
Confidence 455566554 57999999999999975 79999999976432110
Q ss_pred HHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HH
Q psy12972 477 LEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 477 l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~ 554 (1578)
.+-.+.+|++.+.++ .+..-|.+=.++. -...-+|||||++|.+|.+... ....++..++...+.+++ ++
T Consensus 50 --~~~~~~~Ei~il~~l----~HpnIv~l~~~~~-~~~~~~lvmE~~~gg~L~~~l~-~~~~l~e~~~~~~~~qi~~al~ 121 (307)
T d1a06a_ 50 --KEGSMENEIAVLHKI----KHPNIVALDDIYE-SGGHLYLIMQLVSGGELFDRIV-EKGFYTERDASRLIFQVLDAVK 121 (307)
T ss_dssp -------CHHHHHHHTC----CCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHH-TCSCCCHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHhC----CCCCCCcEEEEEE-ECCEEEEEEeccCCCcHHHhhh-cccCCCHHHHHHHHHHHHHHHH
Confidence 001235666666554 2333333333332 2344579999999999988643 344678777777766666 78
Q ss_pred HHHHcCccccCCCCCCCCC------CeeEEecCCchh
Q psy12972 555 QIFQTGFVHADPHSGNDVN------TWLYPVDLGDKF 585 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv------~~v~liDfG~~~ 585 (1578)
.+|..|++|||+||.|||+ +.++++|||...
T Consensus 122 ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~ 158 (307)
T d1a06a_ 122 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 158 (307)
T ss_dssp HHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC----
T ss_pred hhhhceeeeEEecccceeecccCCCceEEEeccceeE
Confidence 8999999999999999996 259999999764
|
| >d1zmaa1 c.47.1.1 (A:1-115) Bacterocin transport accessory protein Bta {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Bacterocin transport accessory protein Bta species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.29 E-value=8.5e-13 Score=129.97 Aligned_cols=97 Identities=18% Similarity=0.273 Sum_probs=81.0
Q ss_pred eccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccc----hhhHhHcCccccCCcE
Q psy12972 858 TTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE----QGLARRLGVGSQLPQI 933 (1578)
Q Consensus 858 Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~----~~L~~k~gV~~~~PTl 933 (1578)
+|.+++.+.+ +.+++++|+||+|||++|+.+.|.|+++++.++.. +.+..+|...+ ++++++|+|.+ +||+
T Consensus 14 ~t~~~~~~~i---~~~~~~~v~f~~~~C~~C~~~~p~l~~~~~~~~~~-v~~v~~~~~~~~~~~~~~~~~~~V~~-~PTl 88 (115)
T d1zmaa1 14 TTVVRAQEAL---DKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAH-IYFINSEEPSQLNDLQAFRSRYGIPT-VPGF 88 (115)
T ss_dssp CCHHHHHHHH---HTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCC-CEEEETTCGGGHHHHHHHHHHHTCCS-SCEE
T ss_pred CCHHHHHHHH---hcCCCEEEEEcCCCCccHHHHHHHHHHHHHHhhhh-hhhheeeccccccccccccccccccc-ccEE
Confidence 4566676666 45789999999999999999999999999999765 55555544333 46899999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHH
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFR 959 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~ 959 (1578)
++|++|+....+.|.++.++|.+|+.
T Consensus 89 i~~~~gk~~~~~~G~~~~~el~~fla 114 (115)
T d1zmaa1 89 VHITDGQINVRCDSSMSAQEIKDFAG 114 (115)
T ss_dssp EEEETTEEEEECCTTCCHHHHHHHHT
T ss_pred EEEECCEEEEEEcCCCCHHHHHHHHc
Confidence 99999998888889999999999983
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.29 E-value=1.3e-12 Score=151.73 Aligned_cols=141 Identities=14% Similarity=0.183 Sum_probs=98.1
Q ss_pred ccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHH
Q psy12972 403 FRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQEL 481 (1578)
Q Consensus 403 F~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 481 (1578)
|+-+ +.||.|++|.||+|+.+ +|+.||||+.+....... ..
T Consensus 8 y~~~--~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~------------------------------~~------ 49 (322)
T d1s9ja_ 8 FEKI--SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI------------------------------RN------ 49 (322)
T ss_dssp EEEE--EEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTH------------------------------HH------
T ss_pred CEEE--EEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHH------------------------------HH------
Confidence 4444 57999999999999964 899999999865432210 01
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-
Q psy12972 482 DFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ- 558 (1578)
Q Consensus 482 Df~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~- 558 (1578)
.+.+|++.++++ .+..-|.+=.++.+ .+.-+|||||++|.+|.++.. ....++...+...+.+++ +..+|.
T Consensus 50 ~~~~Ei~il~~l----~HpnIv~l~~~~~~-~~~~~iVmEy~~gg~L~~~l~-~~~~l~~~~~~~~~~qil~aL~yLH~~ 123 (322)
T d1s9ja_ 50 QIIRELQVLHEC----NSPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREK 123 (322)
T ss_dssp HHHHHGGGGGGC----CCTTBCCEEEEEEC-SSEEEEEEECCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC----CCCCCCcEEEEEEE-CCEEEEEEEcCCCCcHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 234455555443 23333444444432 344579999999999988743 344677777666666666 778885
Q ss_pred cCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 559 TGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+|++|||+||.|||+. .++++|||.+..+
T Consensus 124 ~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~ 155 (322)
T d1s9ja_ 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 155 (322)
T ss_dssp HCCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred CCEEccccCHHHeeECCCCCEEEeeCCCcccc
Confidence 6999999999999964 6999999987654
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.27 E-value=3e-12 Score=148.66 Aligned_cols=135 Identities=12% Similarity=0.103 Sum_probs=98.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+..-.+ +..+.+|+
T Consensus 11 ~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~--------------------------------------~~~~~~Ei 52 (321)
T d1tkia_ 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD--------------------------------------QVLVKKEI 52 (321)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCTHH--------------------------------------HHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEcCCccc--------------------------------------HHHHHHHH
Confidence 68999999999999965 7999999998643211 01135566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+..-|.+-.++.+ .+.-+|||||++|..|.+...-....++..++...+.+++ ++.+|..|++|||
T Consensus 53 ~il~~l----~HpnIv~~~~~~~~-~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrD 127 (321)
T d1tkia_ 53 SILNIA----RHRNILHLHESFES-MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFD 127 (321)
T ss_dssp HHHHHS----CCTTBCCEEEEEEE-TTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhC----CCCCCCeEEEEEEE-CCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 666554 34344555555533 3456899999999999876432223578888777776666 8899999999999
Q ss_pred CCCCCCCCC-----eeEEecCCchhh
Q psy12972 566 PHSGNDVNT-----WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~-----~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 128 lKp~NIll~~~~~~~ikl~DFG~~~~ 153 (321)
T d1tkia_ 128 IRPENIIYQTRRSSTIKIIEFGQARQ 153 (321)
T ss_dssp CCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred ccccceeecCCCceEEEEcccchhhc
Confidence 999999964 488999997643
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=4.2e-12 Score=144.96 Aligned_cols=133 Identities=15% Similarity=0.104 Sum_probs=99.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|+||+|++++++.||||+.+.+... +-+|.+|+.
T Consensus 23 ~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~--------------------------------------~~~~~~E~~ 64 (285)
T d1fmka3 23 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--------------------------------------PEAFLQEAQ 64 (285)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEECCTTSSC--------------------------------------HHHHHHHHH
T ss_pred eEEeeCCCeEEEEEEECCCCEEEEEEECcccCC--------------------------------------HHHHHHHHH
Confidence 579999999999999999999999998643211 013677888
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
++.+++ +..-|.+=..+ ...+..|||||++|.++.+..... ...++...+...+.++. +..+|..|++|+|
T Consensus 65 ~l~~l~----h~nIv~~~g~~--~~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~D 138 (285)
T d1fmka3 65 VMKKLR----HEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 138 (285)
T ss_dssp HHHHCC----CTTBCCEEEEE--CSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHhcc----cCCEeEEEEEE--ecCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheeccc
Confidence 887764 33334333333 234568999999999888764433 24578877777776666 8899999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||++ .+++.|||...
T Consensus 139 lKp~NIll~~~~~~kl~DfGla~ 161 (285)
T d1fmka3 139 LRAANILVGENLVCKVADFGLAR 161 (285)
T ss_dssp CSGGGEEECGGGCEEECCCCTTC
T ss_pred ccceEEEECCCCcEEEcccchhh
Confidence 999999975 58999999864
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=4.9e-12 Score=142.31 Aligned_cols=134 Identities=16% Similarity=0.114 Sum_probs=100.8
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||+||+|.||+|+.++|++||||+.+.+-.. +-+|.+|.+
T Consensus 10 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~--------------------------------------~~~~~~Ev~ 51 (258)
T d1k2pa_ 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--------------------------------------EDEFIEEAK 51 (258)
T ss_dssp CCCCEETTEEEEEEEETTTEEEEEEEEESSSSC--------------------------------------HHHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCEEEEEEECcCcCC--------------------------------------HHHHHHHHH
Confidence 579999999999999999999999998743110 114567777
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.+++ +..-|.+=.++. -...-++||||++|.++.+........++...+...+.++. +..+|..|++|+|+
T Consensus 52 ~~~~l~----HpnIv~~~g~~~-~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dl 126 (258)
T d1k2pa_ 52 VMMNLS----HEKLVQLYGVCT-KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDL 126 (258)
T ss_dssp HHHTCC----CTTBCCEEEEEC-CSSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCC
T ss_pred HHHhcC----CCceeeEEEEEe-eCCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccc
Confidence 777663 333344444432 23455799999999998887555566777777777666666 88899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
||.|||+. .+++.|||...
T Consensus 127 k~~Nill~~~~~~kl~DfG~a~ 148 (258)
T d1k2pa_ 127 AARNCLVNDQGVVKVSDFGLSR 148 (258)
T ss_dssp SGGGEEECTTCCEEECCCSSCC
T ss_pred cceeEEEcCCCcEEECcchhhe
Confidence 99999965 58899999763
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.26 E-value=3.4e-12 Score=146.21 Aligned_cols=131 Identities=21% Similarity=0.266 Sum_probs=92.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+....... + .++.|+
T Consensus 11 ~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--------------------~-------------------~~~~e~ 51 (293)
T d1csna_ 11 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--------------------P-------------------QLRDEY 51 (293)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS--------------------C-------------------CHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEccccCc--------------------H-------------------HHHHHH
Confidence 67999999999999964 8999999987432110 0 124455
Q ss_pred HHHHHHHHhhCCCCCeeecEE--eeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRI--LWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v--~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+..+. +.+. +|.+ +.......++||||+ |..+.+........++...+...+.+++ ++.+|..|++|
T Consensus 52 ~~~~~l~----~~~~--i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiH 124 (293)
T d1csna_ 52 RTYKLLA----GCTG--IPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVY 124 (293)
T ss_dssp HHHHHTT----TCTT--CCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHhc----CCCC--CCEEEEEeecCCccEEEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCcee
Confidence 5555443 2232 2222 223355678999999 6677776544445677777766666655 88999999999
Q ss_pred cCCCCCCCCCC--------eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT--------WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~--------~v~liDfG~~~ 585 (1578)
||+||.|||++ .++++|||.+.
T Consensus 125 rDiKp~Nili~~~~~~~~~~vkl~DFG~a~ 154 (293)
T d1csna_ 125 RDIKPDNFLIGRPNSKNANMIYVVDFGMVK 154 (293)
T ss_dssp CCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred ccCCccceeecCcccccCCceEEcccceeE
Confidence 99999999974 48999999764
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.26 E-value=3.6e-12 Score=146.28 Aligned_cols=135 Identities=19% Similarity=0.217 Sum_probs=94.5
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+........ .+..|+
T Consensus 13 ~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~---------------------------------------~~~~E~ 53 (299)
T d1ckia_ 13 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP---------------------------------------QLHIES 53 (299)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSC---------------------------------------CHHHHH
T ss_pred EEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCH---------------------------------------HHHHHH
Confidence 6799999999999996 479999999976432110 124555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +.+.|..-..+.......++||||+.| .+.+........++...+...+.+++ ++.+|..|++|||
T Consensus 54 ~i~~~l~----~~~~i~~~~~~~~~~~~~~ivme~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrD 128 (299)
T d1ckia_ 54 KIYKMMQ----GGVGIPTIRWCGAEGDYNVMVMELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRD 128 (299)
T ss_dssp HHHHHST----TSTTCCCEEEEEEETTEEEEEEECCCC-BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHHcc----CCCcccEEEEEEecCCEEEEEEEEcCC-chhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence 5555443 344333333333344567899999955 44444334456688888777777766 8899999999999
Q ss_pred CCCCCCCCC------eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT------WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~------~v~liDfG~~~~l 587 (1578)
+||.|||+. .++++|||.+..+
T Consensus 129 iKp~NIl~~~~~~~~~vkl~DFG~a~~~ 156 (299)
T d1ckia_ 129 VKPDNFLMGLGKKGNLVYIIDFGLAKKY 156 (299)
T ss_dssp CCGGGEEECCGGGTTCEEECCCSSCEEC
T ss_pred CCHhhccccccCCCceeeeeccCcceec
Confidence 999999843 3899999987543
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.25 E-value=5.2e-12 Score=143.41 Aligned_cols=137 Identities=22% Similarity=0.201 Sum_probs=96.9
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.++.....- + ....|.+|+
T Consensus 13 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~----------------------------~------~~~~~~~E~ 58 (277)
T d1o6ya_ 13 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDP----------------------------S------FYLRFRREA 58 (277)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCH----------------------------H------HHHHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCH----------------------------H------HHHHHHHHH
Confidence 6899999999999995 5899999999876533210 0 012356777
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC---CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS---STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~---t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+.+.++ .+...|.+=.++..-. ..-+|||||++|..|.+... ....++..++...+.+++ ++.+|..|++
T Consensus 59 ~~l~~~----~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~-~~~~l~~~~~~~i~~qi~~al~~lH~~~ii 133 (277)
T d1o6ya_ 59 QNAAAL----NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEGPMTPKRAIEVIADACQALNFSHQNGII 133 (277)
T ss_dssp HHHHTC----CCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHhc----CCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 777654 2333333333332211 12469999999999887643 344678877777766666 8899999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCch
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~ 584 (1578)
|||+||.|||+. .++++|||..
T Consensus 134 HrDiKP~NIll~~~~~~~l~d~~~~ 158 (277)
T d1o6ya_ 134 HRDVKPANIMISATNAVKVMDFGIA 158 (277)
T ss_dssp CCCCSGGGEEEETTSCEEECCCTTC
T ss_pred CccccCcccccCccccceeehhhhh
Confidence 999999999964 5888999965
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.25 E-value=2.1e-12 Score=146.76 Aligned_cols=134 Identities=16% Similarity=0.179 Sum_probs=94.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+++ ..||||+.+...... + ..-.|.+|++
T Consensus 14 ~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~----------------------------~-------~~~~~~~E~~ 56 (276)
T d1uwha_ 14 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTP----------------------------Q-------QLQAFKNEVG 56 (276)
T ss_dssp SEEEECSSCEEEEEESS--SEEEEEECCCSSCCT----------------------------T-------HHHHHHHHHH
T ss_pred EEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCH----------------------------H-------HHHHHHHHHH
Confidence 57999999999999864 369999986532110 0 0013567777
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.+++ |..-|.+=.+. ....-+|||||++|.+|.+........++...+...+.++. ++.+|..|++|||+
T Consensus 57 ~l~~l~----HpnIv~~~~~~--~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDl 130 (276)
T d1uwha_ 57 VLRKTR----HVNILLFMGYS--TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130 (276)
T ss_dssp HHTTCC----CTTBCCEEEEE--CSSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred HHHhCC----CCCEeeeeEEE--eccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEecccc
Confidence 776653 22223222222 22345899999999999887543345578777777766666 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|.|||+. .++++|||...
T Consensus 131 Kp~NiLl~~~~~~Kl~DFGla~ 152 (276)
T d1uwha_ 131 KSNNIFLHEDLTVKIGDFGLAT 152 (276)
T ss_dssp CGGGEEEETTSSEEECCCCCSC
T ss_pred CHHHEEEcCCCCEEEcccccee
Confidence 99999964 58999999763
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.24 E-value=3.4e-12 Score=144.51 Aligned_cols=139 Identities=14% Similarity=0.059 Sum_probs=89.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+.+-... .+ . -.+.+|+
T Consensus 10 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~--~~---------------------------~------~~~~~E~ 54 (269)
T d2java1 10 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE--AE---------------------------K------QMLVSEV 54 (269)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCH--HH---------------------------H------HHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCH--HH---------------------------H------HHHHHHH
Confidence 67999999999999964 89999999986542110 00 0 0245666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCc-eEEEEeccCCCcCCchhhH---hhcCCCHHHHHHHHHHHH--HHHHHHcC-
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSST-RVLTTEFIDGVKISDKEGL---LEKGFSLADVDRKLFTAF--AEQIFQTG- 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~-~VLVME~i~G~~l~d~~~l---~~~~~~~~~v~~~l~~~~--l~~i~~~G- 560 (1578)
+.+.++. +..-|.+=.++.+-+.. -+|||||++|.+|.++..- ....++...+...+.++. ++.+|..|
T Consensus 55 ~il~~l~----HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~ 130 (269)
T d2java1 55 NLLRELK----HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 130 (269)
T ss_dssp HHTTSCC----CTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHCC----CCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6665542 33334444444333333 3699999999999987431 224577777776666666 78889876
Q ss_pred ----ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 ----FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ----~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|||+||.|||+. .++++|||....
T Consensus 131 ~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~ 163 (269)
T d2java1 131 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 163 (269)
T ss_dssp ---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred CCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence 99999999999965 599999997644
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.24 E-value=5.7e-12 Score=144.33 Aligned_cols=149 Identities=12% Similarity=0.102 Sum_probs=102.3
Q ss_pred hhhhccccCCcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+++.|.-. +.||.|++|.||+|+. .+|+.||||+........-. ....
T Consensus 8 i~d~Y~~~--~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~-----------------~~~~------------ 56 (293)
T d1jksa_ 8 VDDYYDTG--EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR-----------------RGVS------------ 56 (293)
T ss_dssp GGGTEEEE--EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCS-----------------SSBC------------
T ss_pred cccCEEEe--EEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhh-----------------hhHH------------
Confidence 45555554 5799999999999996 48999999998643211000 0000
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
.-++.+|++.+.++. +..-|.+=.++. ....-+|||||++|.+|.++.. ...+++...+...+.+++ ++.
T Consensus 57 --~~~~~~E~~il~~l~----HpnIv~~~~~~~-~~~~~~iv~E~~~gg~L~~~i~-~~~~l~~~~~~~~~~qi~~al~y 128 (293)
T d1jksa_ 57 --REDIEREVSILKEIQ----HPNVITLHEVYE-NKTDVILILELVAGGELFDFLA-EKESLTEEEATEFLKQILNGVYY 128 (293)
T ss_dssp --HHHHHHHHHHHHHCC----CTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHhCC----CCCCCcEEEEEE-ECCEEEEEEEcCCCccccchhc-cccccchhHHHHHHHHHHHHHHh
Confidence 113567777777663 333344333432 2344579999999999988743 334688777766666655 788
Q ss_pred HHHcCccccCCCCCCCCCC-------eeEEecCCchhh
Q psy12972 556 IFQTGFVHADPHSGNDVNT-------WLYPVDLGDKFR 586 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~-------~v~liDfG~~~~ 586 (1578)
+|..|++|||+||.|||+. .++++|||....
T Consensus 129 LH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~ 166 (293)
T d1jksa_ 129 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166 (293)
T ss_dssp HHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred hhhcceeecccccceEEEecCCCcccceEecchhhhhh
Confidence 9999999999999999963 389999997643
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.24 E-value=4.7e-12 Score=145.51 Aligned_cols=137 Identities=20% Similarity=0.206 Sum_probs=92.8
Q ss_pred cccccccceEEEEEEec-CCC---EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGV---EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~---~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|+.+ +|+ .||||+..++.... ..-+|.
T Consensus 32 ~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~ 75 (299)
T d1jpaa_ 32 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEK------------------------------------QRRDFL 75 (299)
T ss_dssp EEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHH------------------------------------HHHHHH
T ss_pred eEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHH------------------------------------HHHHHH
Confidence 57999999999999975 443 58888876543221 001356
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.+++ |..-|.+=.++ .....-+|||||++|.+|.++.......++..++...+.++. +..+|..|++
T Consensus 76 ~E~~~l~~l~----HpnIv~l~g~~-~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~ii 150 (299)
T d1jpaa_ 76 SEASIMGQFD----HPNVIHLEGVV-TKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 150 (299)
T ss_dssp HHHHHHTTCC----CTTBCCEEEEE-CSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCC----CCCCccEEEEE-eeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 7777776553 33334443433 223456899999999999886543334577777766666666 8889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|||+||.|||+. .+++.|||....
T Consensus 151 HrDlKp~NILl~~~~~~Kl~DFGla~~ 177 (299)
T d1jpaa_ 151 HRDLAARNILVNSNLVCKVSDFGLSRF 177 (299)
T ss_dssp CSCCCGGGEEECTTCCEEECCC-----
T ss_pred cCccccceEEECCCCcEEECCcccceE
Confidence 999999999964 599999997643
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.23 E-value=7.5e-12 Score=143.01 Aligned_cols=137 Identities=13% Similarity=0.051 Sum_probs=94.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+...... + . . .-.+.+|+
T Consensus 14 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~---~----------------~-~--------------~~~~~~E~ 59 (288)
T d1uu3a_ 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIK---E----------------N-K--------------VPYVTRER 59 (288)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH---T----------------T-C--------------HHHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccC---H----------------H-H--------------HHHHHHHH
Confidence 67999999999999964 89999999986432100 0 0 0 01245666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-|.+=..+. -...-+|||||++|.+|.++.. ....++...+...+.+++ ++.+|..|++|||
T Consensus 60 ~il~~l~----HpnIv~l~~~~~-~~~~~~ivmEy~~gg~L~~~~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrD 133 (288)
T d1uu3a_ 60 DVMSRLD----HPFFVKLYFTFQ-DDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 133 (288)
T ss_dssp HHHHHCC----STTBCCEEEEEE-CSSEEEEEECCCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHHcC----CCCeeEEEEEEE-ECCEEEEEEEccCCCCHHHhhh-ccCCCCHHHHHHHHHHHHHHHHhhccccEEcCc
Confidence 6666653 322233323332 1234579999999999987643 335677776666655555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 134 iKp~NIll~~~~~vkl~DFG~a~ 156 (288)
T d1uu3a_ 134 LKPENILLNEDMHIQITDFGTAK 156 (288)
T ss_dssp CSGGGEEECTTSCEEECCCTTCE
T ss_pred CCccccccCCCceEEecccccce
Confidence 999999964 58999999764
|
| >d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Long alpha-hairpin superfamily: Chaperone J-domain family: Chaperone J-domain domain: HSC20 (HSCB), N-terminal (J) domain species: Escherichia coli [TaxId: 562]
Probab=99.23 E-value=1.4e-12 Score=118.51 Aligned_cols=64 Identities=23% Similarity=0.427 Sum_probs=56.4
Q ss_pred CCCccccccccc--CCHHHHHHHhhhhhhhcCCCCCCC------hhHHHHHHHHHHHHHHcCCHHHHHhccc
Q psy12972 637 LDPYETLGVPRT--ASLQEIRKNYKRLVVEWHPDKNND------PTAQEKFLQLTEAYNILSDAERRKQYDL 700 (1578)
Q Consensus 637 ~d~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~------~~a~~~f~~i~~Ay~~L~d~~~R~~yD~ 700 (1578)
+|+|++||++++ ++.++||+|||++++++|||+... ..+.+.|..|++||++|+||.+|+.|+.
T Consensus 1 lnyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll 72 (76)
T d1fpoa1 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLL 72 (76)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 489999999885 558999999999999999999753 2366789999999999999999999975
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=1.1e-11 Score=141.28 Aligned_cols=137 Identities=20% Similarity=0.238 Sum_probs=97.6
Q ss_pred cccccccceEEEEEEecCC-----CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTKEG-----VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G-----~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.||+|.||+|+++++ ..||||+.++..... .+.+|
T Consensus 13 ~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~------------------------------------~~~~~ 56 (283)
T d1mqba_ 13 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEK------------------------------------QRVDF 56 (283)
T ss_dssp EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHH------------------------------------HHHHH
T ss_pred eEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChH------------------------------------HHHHH
Confidence 5799999999999997642 479999986543211 12346
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
.+|++.+.+++ |..-|.+=.++. -.....+||||++|..+.+...-....++...+...+.++. ++.+|..|+
T Consensus 57 ~~E~~il~~l~----H~nIv~~~g~~~-~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~i 131 (283)
T d1mqba_ 57 LGEAGIMGQFS----HHNIIRLEGVIS-KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY 131 (283)
T ss_dssp HHHHHHHHTCC----CTTBCCEEEEEC-SSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcC----CCCEeeeeEEEe-cCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccccc
Confidence 78887777653 333344333332 23456899999999988876543445677777777666665 889999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|||+||.|||+. .+++.|||....
T Consensus 132 iHrDlKp~NILl~~~~~~Kl~DFGla~~ 159 (283)
T d1mqba_ 132 VHRDLAARNILVNSNLVCKVSDFGLSRV 159 (283)
T ss_dssp CCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred ccCccccceEEECCCCeEEEcccchhhc
Confidence 9999999999975 589999998743
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=99.22 E-value=1.5e-11 Score=142.87 Aligned_cols=129 Identities=18% Similarity=0.203 Sum_probs=93.3
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+. .+|+.||||+..+.-.+ ++.+|+
T Consensus 41 ~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~----------------------------------------~~~~Ei 80 (328)
T d3bqca1 41 RKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK----------------------------------------KIKREI 80 (328)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSSCHH----------------------------------------HHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEECHHHHH----------------------------------------HHHHHH
Confidence 6799999999999996 48999999998653221 124566
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCC-CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDK-SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+.++. +++. +.+-.++... ...-++||||++|..+.+.. ..++...+...+.+++ +..+|..|++|
T Consensus 81 ~il~~l~----~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~----~~l~e~~i~~i~~qil~aL~~LH~~gIvH 152 (328)
T d3bqca1 81 KILENLR----GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHSMGIMH 152 (328)
T ss_dssp HHHHHHT----TSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTT----TSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHhcc----CCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHh----cCCCHHHHHHHHHHHHHHHHHHhhccccc
Confidence 6665553 2332 3333344322 23467999999999987652 3577777766666666 78999999999
Q ss_pred cCCCCCCCCCC----eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~----~v~liDfG~~~ 585 (1578)
||+||.|||+. .++++|||...
T Consensus 153 rDiKp~NILi~~~~~~vkl~DFG~a~ 178 (328)
T d3bqca1 153 RDVKPHNVMIDHEHRKLRLIDWGLAE 178 (328)
T ss_dssp CCCSGGGEEEETTTTEEEECCGGGCE
T ss_pred ccccccceEEcCCCCeeeecccccce
Confidence 99999999963 48899999763
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=1.2e-11 Score=141.73 Aligned_cols=137 Identities=16% Similarity=0.069 Sum_probs=86.5
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+.+.... .+-.
T Consensus 19 ~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~------------------------------------~~~~ 62 (299)
T d1ywna1 19 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS------------------------------------EHRA 62 (299)
T ss_dssp EEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHH------------------------------------HHHH
T ss_pred eEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcH------------------------------------HHHH
Confidence 67999999999999853 46799999986432211 0011
Q ss_pred HHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHh---------------hcCCCHHHHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL---------------EKGFSLADVDR 546 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~---------------~~~~~~~~v~~ 546 (1578)
+..|...+.++. +++. |..-....+-...-.+||||++|.+|.++.... ...++...+..
T Consensus 63 ~~~e~~~l~~~~----~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 138 (299)
T d1ywna1 63 LMSELKILIHIG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 138 (299)
T ss_dssp HHHHHHHHHHHC----CCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHH
T ss_pred HHHHHHHHHhhc----CCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHH
Confidence 334444444442 3333 233233322233457999999999999875422 12356666666
Q ss_pred HHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 547 KLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 547 ~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
.+.++. +..+|..|++|||+||.|||+. .+++.|||...
T Consensus 139 ~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~ 182 (299)
T d1ywna1 139 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 182 (299)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECC-----
T ss_pred HHHHHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEccCcchh
Confidence 666655 7889999999999999999975 59999999764
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.22 E-value=1.4e-11 Score=145.42 Aligned_cols=141 Identities=16% Similarity=0.042 Sum_probs=91.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+..+.--..-. .+..+.+|.
T Consensus 10 ~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~----------------------------------~~~~~~~e~ 55 (364)
T d1omwa3 10 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ----------------------------------GETLALNER 55 (364)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHT----------------------------------CHHHHHHHH
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhh----------------------------------HHHHHHHHH
Confidence 67999999999999965 7999999998642111000 001122333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.++.++ .+.+..-|.+=.++. -...-+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|++|||
T Consensus 56 ~~~~~l~-~~~hpnIv~l~~~~~-~~~~~~ivmE~~~gg~L~~~l~-~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrD 132 (364)
T d1omwa3 56 IMLSLVS-TGDCPFIVCMSYAFH-TPDKLSFILDLMNGGDLHYHLS-QHGVFSEADMRFYAAEIILGLEHMHNRFVVYRD 132 (364)
T ss_dssp HHHHHHS-SSCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHHHh-cCCCCcEEEEEEEEE-ECCEEEEEEEecCCCcHHHHHH-hcccccHHHHHHHHHHHHHHHHHHHHCCcccee
Confidence 2232222 112222233333332 2345689999999999988643 234566666665555555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
+||.|||+. .++++|||....
T Consensus 133 lKP~NILl~~~g~iKl~DFGla~~ 156 (364)
T d1omwa3 133 LKPANILLDEHGHVRISDLGLACD 156 (364)
T ss_dssp CSGGGEEECSSSCEEECCCTTCEE
T ss_pred eccceeEEcCCCcEEEeeeceeee
Confidence 999999964 599999997643
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.21 E-value=1.3e-11 Score=142.86 Aligned_cols=137 Identities=13% Similarity=0.079 Sum_probs=92.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||+|++|+||+|+.+ +|+.||||+.+....... . . . -.+.+|+
T Consensus 10 ~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~-------------------~-~--------~------~~~~~E~ 55 (316)
T d1fota_ 10 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRL-------------------K-Q--------V------EHTNDER 55 (316)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHT-------------------T-C--------H------HHHHHHH
T ss_pred EEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCH-------------------H-H--------H------HHHHHHH
Confidence 67999999999999964 799999999865321100 0 0 0 0134566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+..-|.+-.++. ....-+|||||++|..+.++.. .....+...+...+.+++ ++.+|..|++|||
T Consensus 56 ~il~~l----~HpnIv~~~~~~~-~~~~~~ivmE~~~gg~l~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrD 129 (316)
T d1fota_ 56 LMLSIV----THPFIIRMWGTFQ-DAQQIFMIMDYIEGGELFSLLR-KSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRD 129 (316)
T ss_dssp HHHHSC----CBTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHH-HTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred HHHHhc----cCcChhheeeeEe-eCCeeeeEeeecCCcccccccc-ccccccccHHHHHHHHHHHhhhhhccCcEEccc
Confidence 555544 2333344444442 2345589999999998877643 334455555444444444 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 130 iKp~NILl~~~g~vkL~DFG~a~ 152 (316)
T d1fota_ 130 LKPENILLDKNGHIKITDFGFAK 152 (316)
T ss_dssp CCGGGEEECTTSCEEECCCSSCE
T ss_pred cCchheeEcCCCCEEEecCccce
Confidence 999999964 69999999764
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.19 E-value=8.1e-12 Score=143.34 Aligned_cols=138 Identities=17% Similarity=0.133 Sum_probs=94.3
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-||.|++|.||+|+. .+|+.||||+.+.+.... ... -.+.+|.
T Consensus 8 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~-----------------------------~~~------~~~~~Ei 52 (298)
T d1gz8a_ 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-----------------------------GVP------STAIREI 52 (298)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEC------------------------------------CC------HHHHHHH
T ss_pred cEEecCcCeEEEEEEECCCCCEEEEEEEehhhcCh-----------------------------HHH------HHHHHHH
Confidence 5699999999999996 589999999986432110 000 1245566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+..-|.+-..+. ..+.-+|||||++|..+.........+++...+...+.+++ ++.+|..|++|||
T Consensus 53 ~il~~l----~Hp~Iv~~~~~~~-~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrD 127 (298)
T d1gz8a_ 53 SLLKEL----NHPNIVKLLDVIH-TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 127 (298)
T ss_dssp HHHTTC----CCTTBCCEEEEEE-ETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHhC----CCCcEEEeccccc-cccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccc
Confidence 666544 2333344333332 23456899999988655443333345688888777777766 8899999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
+||+|||+. .++++|||....
T Consensus 128 iKpeNIl~~~~~~~kl~DFG~a~~ 151 (298)
T d1gz8a_ 128 LKPQNLLINTEGAIKLADFGLARA 151 (298)
T ss_dssp CCGGGEEECTTSCEEECSTTHHHH
T ss_pred cCchheeecccCcceeccCCccee
Confidence 999999965 589999997643
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.19 E-value=1.1e-11 Score=144.81 Aligned_cols=132 Identities=14% Similarity=0.075 Sum_probs=91.6
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.+..- .+.+|.
T Consensus 18 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~------------------------------------------~~~~E~ 55 (335)
T d2ozaa1 18 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP------------------------------------------KARREV 55 (335)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEECSH------------------------------------------HHHHHH
T ss_pred EEeeeccCeEEEEEEECCCCCEEEEEEECCcH------------------------------------------HHHHHH
Confidence 5799999999999996 589999999975210 012344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC---CCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK---SSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~---~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
..+.++. .+..-|.+=.++.+. .+.-+|||||++|.+|.++..-. ..+++..++...+.+++ ++.+|..|+
T Consensus 56 ~~~~~~~---~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~i 132 (335)
T d2ozaa1 56 ELHWRAS---QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 132 (335)
T ss_dssp HHHHHHT---TSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHhc---CCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4443332 222224444444321 12247999999999998874321 13467777766666666 888999999
Q ss_pred cccCCCCCCCCCC------eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~------~v~liDfG~~~ 585 (1578)
+|||++|+|||+. .++++|||.+.
T Consensus 133 iHRDiKp~NIll~~~~~~~~~Kl~DFG~a~ 162 (335)
T d2ozaa1 133 AHRDVKPENLLYTSKRPNAILKLTDFGFAK 162 (335)
T ss_dssp ECCCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred ccccccccccccccccccccccccccceee
Confidence 9999999999964 38999999764
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.18 E-value=2.8e-11 Score=141.22 Aligned_cols=138 Identities=13% Similarity=0.056 Sum_probs=93.0
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+. .+|+.||||+.+...... .+ . .-.+.+|.
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~--~~------------------~--------------~~~~~~E~ 56 (337)
T d1o6la_ 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--KD------------------E--------------VAHTVTES 56 (337)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TT------------------C--------------HHHHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEchhhccC--HH------------------H--------------HHHHHHHH
Confidence 5799999999999996 489999999986431100 00 0 01134565
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+..-|.+=.++.+ ...-+|||||++|..|.+... ....++...+...+.+++ ++.+|..|++|||
T Consensus 57 ~il~~l----~hp~Iv~l~~~~~~-~~~~~iv~ey~~gg~L~~~~~-~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRD 130 (337)
T d1o6la_ 57 RVLQNT----RHPFLTALKYAFQT-HDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130 (337)
T ss_dssp HHHHSC----CCTTBCCEEEEEEC-SSEEEEEEECCTTCBHHHHHH-HHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred HHHHhC----CCCCEEEEEeeecc-ccccccceeccCCCchhhhhh-cccCCcHHHHHHHHHHHhhhhhhhhhcCccccc
Confidence 555544 22222333333322 234579999999999977643 334566665555555555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||.+..
T Consensus 131 lKP~NILl~~~g~vkl~DFG~a~~ 154 (337)
T d1o6la_ 131 IKLENLMLDKDGHIKITDFGLCKE 154 (337)
T ss_dssp CCGGGEEECTTSCEEECCCTTCBC
T ss_pred cCHHHeEecCCCCEEEeecccccc
Confidence 999999963 699999998643
|
| >d1hyua4 c.47.1.2 (A:103-198) Alkyl hydroperoxide reductase subunit F (AhpF), N-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: PDI-like domain: Alkyl hydroperoxide reductase subunit F (AhpF), N-terminal domain species: Salmonella typhimurium [TaxId: 90371]
Probab=99.18 E-value=1.8e-11 Score=116.45 Aligned_cols=80 Identities=13% Similarity=0.161 Sum_probs=69.1
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHH
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQ 952 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~ 952 (1578)
....++.||+|||++|+.+.|.|+++|.... ++.+..||++.++++|++|+|++ +||+++ +|+.. +.|.++.+
T Consensus 15 ~~~~i~~F~s~~C~~C~~~~p~~~~~a~~~~--~i~~~~vd~~~~~~l~~~~~I~~-vPt~~~--ng~~~--~~G~~~~~ 87 (96)
T d1hyua4 15 GDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGTFQNEITERNVMG-VPAVFV--NGKEF--GQGRMTLT 87 (96)
T ss_dssp SCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTTCHHHHHHTTCCS-SSEEEE--TTEEE--EESCCCHH
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHhCC--ceEEEEEecccchHHHhhccccc-ccEEEE--CCEEE--EecCCCHH
Confidence 3456788999999999999999999998754 39999999999999999999998 999854 77764 34889999
Q ss_pred HHHHHHH
Q psy12972 953 KMVEFFR 959 (1578)
Q Consensus 953 ~L~~fi~ 959 (1578)
+|++++.
T Consensus 88 ~l~~~le 94 (96)
T d1hyua4 88 EIVAKVD 94 (96)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9999874
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.17 E-value=2.5e-11 Score=142.47 Aligned_cols=138 Identities=16% Similarity=0.113 Sum_probs=96.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+....... +.. .. -.+.+|.
T Consensus 47 ~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~----~~~----------------~~--------------~~~~~E~ 92 (350)
T d1rdqe_ 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV----KLK----------------QI--------------EHTLNEK 92 (350)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH----HTT----------------CH--------------HHHHHHH
T ss_pred EEeecCcCcEEEEEEECCCCCEEEEEEEchHHcc----CHH----------------HH--------------HHHHHHH
Confidence 58999999999999975 8999999998643210 000 00 0234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+..-|.+-.++. ....-.+||||+.|..+.+... ....++...+...+.+++ +..+|..|++|||
T Consensus 93 ~il~~l----~hpnIv~~~~~~~-~~~~~~~v~e~~~~g~l~~~l~-~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRD 166 (350)
T d1rdqe_ 93 RILQAV----NFPFLVKLEFSFK-DNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166 (350)
T ss_dssp HHHTTC----CCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHHc----CCCcEeecccccc-cccccccccccccccchhhhHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCc
Confidence 655444 2333233333332 2344579999999999877643 345678777777666666 8899999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
+||.|||+. .++++|||....
T Consensus 167 IKP~NILl~~~g~ikL~DFG~a~~ 190 (350)
T d1rdqe_ 167 LKPENLLIDQQGYIQVTDFGFAKR 190 (350)
T ss_dssp CSGGGEEECTTSCEEECCCTTCEE
T ss_pred CCHHHcccCCCCCEEeeeceeeee
Confidence 999999964 599999997644
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.17 E-value=9.8e-12 Score=142.60 Aligned_cols=140 Identities=16% Similarity=0.120 Sum_probs=90.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-||.|++|+||+|+.+ +|+.||||+.+........ +.+. -.+.+|+
T Consensus 4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~--------------------------~~~~------~~~~~Ei 51 (299)
T d1ua2a_ 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAK--------------------------DGIN------RTALREI 51 (299)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC--------------------------------------C------THHHHHH
T ss_pred eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhh--------------------------HHHH------HHHHHHH
Confidence 46999999999999965 7999999997543211100 0011 1245666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-|.+-.++. ..+.-+|||||++|..+..+.. ....++...+...+.+++ ++.+|..|++|||
T Consensus 52 ~il~~l~----hpnIv~~~~~~~-~~~~~~ivmE~~~~~~~~~~~~-~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrD 125 (299)
T d1ua2a_ 52 KLLQELS----HPNIIGLLDAFG-HKSNISLVFDFMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRD 125 (299)
T ss_dssp HHHHHCC----CTTBCCEEEEEC-CTTCCEEEEECCSEEHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHhCC----CCCEeEEEeeec-cCCceeehhhhhcchHHhhhhh-cccCCCHHHHHHHHHHHHHHHHHhhccceeccc
Confidence 6665553 333344444442 2345689999999976655422 233456555555555555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
+||.|||+. .++++|||....
T Consensus 126 iKp~NIli~~~~~~KL~DFG~a~~ 149 (299)
T d1ua2a_ 126 LKPNNLLLDENGVLKLADFGLAKS 149 (299)
T ss_dssp CCGGGEEECTTCCEEECCCGGGST
T ss_pred CCcceEEecCCCccccccCccccc
Confidence 999999964 689999997643
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.16 E-value=3.1e-11 Score=141.30 Aligned_cols=136 Identities=18% Similarity=0.099 Sum_probs=95.3
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||+|++|+||+|+. .+|+.||||+.++.-... .. -.+.+|.
T Consensus 14 ~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~------------------------------~~------~~~~~Ei 57 (345)
T d1pmea_ 14 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT------------------------------YC------QRTLREI 57 (345)
T ss_dssp EECC---CCCEEEEEETTTCSEEEEEEECCTTCHH------------------------------HH------HHHHHHH
T ss_pred EEEeeccCeEEEEEEECCCCcEEEEEEEehhcChH------------------------------HH------HHHHHHH
Confidence 7899999999999985 589999999986432110 00 1235666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC---CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS---STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~---t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
..+.++. +...|.+-.++...+ ...+++||++.|.+|.++ +...+++...+...+.+++ ++.+|..|++
T Consensus 58 ~il~~l~----hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~--l~~~~l~~~~i~~i~~qil~al~yLH~~~ii 131 (345)
T d1pmea_ 58 KILLRFR----HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKL--LKTQHLSNDHICYFLYQILRGLKYIHSANVL 131 (345)
T ss_dssp HHHHHCC----CTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHH--HHHCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHcC----CCCCCcEEEEEeeccccccceEEEEEeecCCchhhh--hhcCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 6766653 344445555553322 245666777889899877 4566888888777777776 8899999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|||+||+|||+. .+++.|||....
T Consensus 132 HRDIKp~NILl~~~~~~kl~DfG~a~~ 158 (345)
T d1pmea_ 132 HRDLKPSNLLLNTTCDLKICDFGLARV 158 (345)
T ss_dssp CCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred CCCCCcceEEECCCCCEEEcccCceee
Confidence 999999999964 589999997643
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.16 E-value=4.3e-11 Score=139.01 Aligned_cols=138 Identities=15% Similarity=0.081 Sum_probs=92.3
Q ss_pred cccccccceEEEEEEecC-C-----CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTKE-G-----VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~-G-----~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+.+. + ..||||+........ ..-.
T Consensus 43 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 86 (325)
T d1rjba_ 43 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSS------------------------------------EREA 86 (325)
T ss_dssp EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------------------------------------------CHH
T ss_pred eEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHH------------------------------------HHHH
Confidence 589999999999999652 2 379999886542211 0123
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh----------------------cCCC
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE----------------------KGFS 540 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~----------------------~~~~ 540 (1578)
|.+|++.+.++. .|..-|.+=.++ .....-+|||||++|.+|.++..-.. ..++
T Consensus 87 ~~~E~~~l~~l~---~HpnIv~l~~~~-~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 162 (325)
T d1rjba_ 87 LMSELKMMTQLG---SHENIVNLLGAC-TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 162 (325)
T ss_dssp HHHHHHHHHHHC---CCTTBCCEEEEE-CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CC
T ss_pred HHHHHHHHHHhc---CCCcEeEEEEEE-eeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCC
Confidence 466776666652 122223333333 22345689999999999988743211 2356
Q ss_pred HHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 541 LADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 541 ~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
...+...+.++. +..+|..|++|||+||.|||+. .++++|||.+..
T Consensus 163 ~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~ 213 (325)
T d1rjba_ 163 FEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARD 213 (325)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEEEeecccccc
Confidence 666666666655 8889999999999999999964 599999998643
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=99.16 E-value=1.5e-11 Score=139.96 Aligned_cols=138 Identities=16% Similarity=0.121 Sum_probs=97.2
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||+|++|.||+|+.++|+.||||+.+...... + .+-.+.+|+.
T Consensus 8 ~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~---~--------------------------------~~~~~~~E~~ 52 (286)
T d1ob3a_ 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDE---G--------------------------------IPSTTIREIS 52 (286)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGGG---C--------------------------------CCHHHHHHHH
T ss_pred cEEecCCCcEEEEEEeCCCCEEEEEEEehhhcCh---H--------------------------------HHHHHHHHHH
Confidence 6799999999999999999999999975432110 0 0012456676
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.++++. +..-|.+=..+ ...+..+++||++.|..+..+.. ....++...+...+.+++ ++.+|..|++|||+
T Consensus 53 il~~l~----hpnIv~~~~~~-~~~~~~~i~~e~~~~~~~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDi 126 (286)
T d1ob3a_ 53 ILKELK----HSNIVKLYDVI-HTKKRLVLVFEHLDQDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL 126 (286)
T ss_dssp GGGGCC----CTTBCCEEEEE-ECSSCEEEEEECCSEEHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred HHHhCC----CCcEEeeeeec-ccCCceeEEEEeehhhhHHHHHh-hcCCcchhhhHHHHHHHHHHHHHhccCcEEecCC
Confidence 666553 32223322222 33466789999998876655532 345678777777666666 89999999999999
Q ss_pred CCCCCCCC---eeEEecCCchhhh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~~l 587 (1578)
||.|||+. .++++|||....+
T Consensus 127 Kp~NIll~~~~~~kl~DfG~a~~~ 150 (286)
T d1ob3a_ 127 KPQNLLINREGELKIADFGLARAF 150 (286)
T ss_dssp CGGGEEECTTSCEEECCTTHHHHH
T ss_pred CCceeeEcCCCCEEecccccceec
Confidence 99999964 5999999986543
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=3.7e-11 Score=135.92 Aligned_cols=136 Identities=15% Similarity=0.097 Sum_probs=92.8
Q ss_pred cccccccceEEEEEEecC----CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTKE----GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~----G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|+... +..||||+.+...... ..-.|.
T Consensus 13 ~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~------------------------------------~~~~~~ 56 (273)
T d1mp8a_ 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS------------------------------------VREKFL 56 (273)
T ss_dssp EEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHH------------------------------------HHHHHH
T ss_pred EEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHH------------------------------------HHHHHH
Confidence 579999999999998652 4578888875432211 012356
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.+++ |..-|.+=..+. ...-+|||||++|..+.+........++...+...+.++. ++.+|..|++
T Consensus 57 ~E~~~l~~l~----HpnIv~l~~~~~--~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ii 130 (273)
T d1mp8a_ 57 QEALTMRQFD----HPHIVKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV 130 (273)
T ss_dssp HHHHHHHTCC----CTTBCCEEEEEC--SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCC----CCCEeeEEEEEe--cCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCee
Confidence 7777776653 333344333332 2456899999999999886544455678777776666665 8889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|||++|.||++. .++++|||....
T Consensus 131 HrDlKp~NIll~~~~~~Kl~DfG~a~~ 157 (273)
T d1mp8a_ 131 HRDIAARNVLVSSNDCVKLGDFGLSRY 157 (273)
T ss_dssp CSCCSGGGEEEEETTEEEECC------
T ss_pred ccccchhheeecCCCcEEEccchhhee
Confidence 999999999964 699999998644
|
| >d1woua_ c.47.1.16 (A:) Putative 42-9-9 protein (thioredoxin containing protein Txnl5) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Txnl5-like domain: Putative 42-9-9 protein (thioredoxin containing protein Txnl5) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.14 E-value=1.7e-11 Score=121.28 Aligned_cols=98 Identities=16% Similarity=0.301 Sum_probs=78.1
Q ss_pred eccccccceecccCCCCcEEEEEEcC-------CCcccccccHHHHHHHHHhCCCceEEEEEECc-------cchhhHhH
Q psy12972 858 TTHWNFEKNYIPKSYTTPHLILFYSD-------WCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-------NEQGLARR 923 (1578)
Q Consensus 858 Lt~~nF~~~vl~~s~~~~~LV~Fyap-------wCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~-------~~~~L~~k 923 (1578)
.+.++|.+.+.+ ...++++|.|||+ ||++|+++.|.++++++.+.+. +.|+.||++ .+..++++
T Consensus 7 ~~~~e~~~~l~~-~~gk~v~v~F~a~~~~~g~sWC~pCk~~~P~~~~l~~~~~~~-~~~~~vdv~~~~~~~d~~~~l~~~ 84 (119)
T d1woua_ 7 SGFEEFHRAVEQ-HNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEG-CVFIYCQVGEKPYWKDPNNDFRKN 84 (119)
T ss_dssp ESHHHHHHHHHT-TTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTT-EEEEEEECCCHHHHHCTTCHHHHH
T ss_pred CCHHHHHHHHHH-cCCCEEEEEEEecCCCCCCCCChhHHHHHHHHHHHHHhcCCc-eEEEEEECCCCcccchhhhhHHHh
Confidence 455677776643 3467999999994 9999999999999999998865 999999984 45679999
Q ss_pred cCccccCCcEEEEcCCccccccCCCCCHHHHHHHHH
Q psy12972 924 LGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFR 959 (1578)
Q Consensus 924 ~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~ 959 (1578)
|+|.+ +||+++|++|+......+ .+++.|..|+.
T Consensus 85 ~~V~~-iPT~i~~~~g~~l~~~~~-~~~~ll~~~~~ 118 (119)
T d1woua_ 85 LKVTA-VPTLLKYGTPQKLVESEC-LQANLVEMLFS 118 (119)
T ss_dssp HCCCS-SSEEEETTSSCEEEGGGG-GCHHHHHHHHH
T ss_pred CCeEE-EEEEEEEECCeEEeeeec-CCHHHHHHHhc
Confidence 99998 999999999986654433 45566655653
|
| >d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Long alpha-hairpin superfamily: Chaperone J-domain family: Chaperone J-domain domain: Hypothetical protein KIAA0730 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.14 E-value=1.1e-11 Score=114.99 Aligned_cols=65 Identities=26% Similarity=0.357 Sum_probs=57.2
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC--hhHHHHHHHHHHHHHHcCCHHHHHhccccCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--PTAQEKFLQLTEAYNILSDAERRKQYDLFGT 703 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~ 703 (1578)
..|+|+||||+.++|.+|||+|||+++++||||+++. ..++++|+.|++||++|+ ++..||++..
T Consensus 15 ~~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~---~~~~~d~~~~ 81 (88)
T d1iura_ 15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLE---KQAFLDQNAD 81 (88)
T ss_dssp HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHH---HHTTCSSSSS
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHH---HHHHhhccch
Confidence 4599999999999999999999999999999999875 458899999999999996 4677776544
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.12 E-value=1.1e-10 Score=135.26 Aligned_cols=140 Identities=16% Similarity=0.057 Sum_probs=94.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+++.... ..+ . -.+..|.
T Consensus 8 ~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~-~~~-------------------~--------------~~~~~e~ 53 (320)
T d1xjda_ 8 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM-DDD-------------------V--------------ECTMVEK 53 (320)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH-TTC-------------------H--------------HHHHHHH
T ss_pred eEEecCCCcEEEEEEECCCCCEEEEEEEchhhccC-hHH-------------------H--------------HHHHHHH
Confidence 68999999999999965 79999999987542110 000 0 0112222
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.-+.+ .+.+..-|.+=.++. ....-+|||||++|..|.++.. ...+++..++...+.+++ ++.+|..|++|||
T Consensus 54 ~~l~~---~~~hp~Iv~~~~~~~-~~~~~yivmEy~~~g~L~~~i~-~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrD 128 (320)
T d1xjda_ 54 RVLSL---AWEHPFLTHMFCTFQ-TKENLFFVMEYLNGGDLMYHIQ-SCHKFDLSRATFYAAEIILGLQFLHSKGIVYRD 128 (320)
T ss_dssp HHHHH---HTTCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred HHHHH---hCCCCcEEEEEEEEc-cCCceeEEEeecCCCcHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence 22221 223333333333332 2344579999999999988753 345677777666666665 8899999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|.|||+. .++++|||....+
T Consensus 129 ikp~NiL~~~~~~~kl~DFG~a~~~ 153 (320)
T d1xjda_ 129 LKLDNILLDKDGHIKIADFGMCKEN 153 (320)
T ss_dssp CCGGGEEECTTSCEEECCCTTCBCC
T ss_pred CcccceeecCCCceeccccchhhhc
Confidence 999999963 6999999987543
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.12 E-value=5.2e-11 Score=136.69 Aligned_cols=141 Identities=16% Similarity=0.094 Sum_probs=97.0
Q ss_pred ccccCCcccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHH
Q psy12972 403 FRSFDENPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVP 476 (1578)
Q Consensus 403 F~~fd~~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 476 (1578)
|+-+ +.||+|++|.||+|+.+ +|+.||||+.+......
T Consensus 15 ~~~~--~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~---------------------------------- 58 (301)
T d1lufa_ 15 IEYV--RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD---------------------------------- 58 (301)
T ss_dssp CEEE--EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHH----------------------------------
T ss_pred cEEe--EEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChH----------------------------------
Confidence 4444 57999999999999864 56899999986543221
Q ss_pred HHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh---------------------
Q psy12972 477 LEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL--------------------- 535 (1578)
Q Consensus 477 l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~--------------------- 535 (1578)
.+-+|.+|++.+.+++ +...+.+=.. .......+++|||++|.+|.++....
T Consensus 59 --~~~~~~~E~~il~~l~----h~niv~~~~~-~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 131 (301)
T d1lufa_ 59 --MQADFQREAALMAEFD----NPNIVKLLGV-CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 131 (301)
T ss_dssp --HHHHHHHHHHHHHTCC----CTTBCCEEEE-ECSSSSCEEEEECCTTCBHHHHHHHTCC-------------------
T ss_pred --HHHHHHHHHHHHHhcC----CCCcccceee-eccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccc
Confidence 1124567777776653 2222332222 23345678999999999998864311
Q ss_pred --hcCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 536 --EKGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 536 --~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
..+++...+...+.++. ++.+|..|++|||++|.|||+. .+++.|||....
T Consensus 132 ~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~ 189 (301)
T d1lufa_ 132 PGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRN 189 (301)
T ss_dssp ---CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCCCcEEEccchhhee
Confidence 12355555555555544 7889999999999999999976 489999998743
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.11 E-value=8.2e-11 Score=135.71 Aligned_cols=136 Identities=14% Similarity=0.067 Sum_probs=95.9
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||+||+|.||+|+++ +|+.||||+.+++-.. ..+..
T Consensus 29 ~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~------------------------------------~~~~~ 72 (311)
T d1t46a_ 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL------------------------------------TEREA 72 (311)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCH------------------------------------HHHHH
T ss_pred eEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCH------------------------------------HHHHH
Confidence 57999999999999863 5789999998764321 11234
Q ss_pred HHHHHHHHHHHHHhhCCCCCe-eecEEeeCCCCceEEEEeccCCCcCCchhhHh-----------------hcCCCHHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYV-YIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-----------------EKGFSLADV 544 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v-~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-----------------~~~~~~~~v 544 (1578)
|.+|+..+.++. +++.| .+=.+. ......+|+|||++|.++.++.... ...++...+
T Consensus 73 ~~~E~~~~~~l~----~HpnIv~~~g~~-~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 147 (311)
T d1t46a_ 73 LMSELKVLSYLG----NHMNIVNLLGAC-TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147 (311)
T ss_dssp HHHHHHHHHHHC----CCTTBCCEEEEE-CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHH
T ss_pred HHHHHHHHHhcc----CCCCEEEEEEEE-eeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHH
Confidence 567777777653 34433 332332 2223468999999999988864321 124666666
Q ss_pred HHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 545 DRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 545 ~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
...+.++. ++.+|..|++|+|++|.||++. .++++|||...
T Consensus 148 ~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~ 193 (311)
T d1t46a_ 148 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR 193 (311)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGS
T ss_pred HHHHHHHHHHHHHHHhCCeeecccccccccccccCcccccccchhe
Confidence 66666655 7889999999999999999964 58999999764
|
| >d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Long alpha-hairpin superfamily: Chaperone J-domain family: Chaperone J-domain domain: Auxilin J-domain species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.11 E-value=4.5e-12 Score=120.39 Aligned_cols=63 Identities=21% Similarity=0.474 Sum_probs=57.3
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCCh----hHHHHHHHHHHHHHHcCCHHHHHhc
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDP----TAQEKFLQLTEAYNILSDAERRKQY 698 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----~a~~~f~~i~~Ay~~L~d~~~R~~y 698 (1578)
..+.|++||++..+|.++||+|||++++.+||||++++ .+++.|+.|++||++|+||.+|+.|
T Consensus 32 ~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y 98 (98)
T d1nz6a_ 32 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 98 (98)
T ss_dssp TCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred cccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence 34789999999999999999999999999999997753 3788999999999999999999877
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.10 E-value=4.1e-11 Score=140.58 Aligned_cols=133 Identities=18% Similarity=0.166 Sum_probs=90.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+...+-. ...+|.
T Consensus 26 k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-----------------------------------------~~~~Ei 64 (350)
T d1q5ka_ 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----------------------------------------FKNREL 64 (350)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-----------------------------------------SCCHHH
T ss_pred eEEeeCcCeEEEEEEECCCCCEEEEEEECccch-----------------------------------------HHHHHH
Confidence 57999999999999975 799999999754310 012355
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC-----ceEEEEeccCCCcCCchhhH--hhcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS-----TRVLTTEFIDGVKISDKEGL--LEKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t-----~~VLVME~i~G~~l~d~~~l--~~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
+.+.++ .+...|.+-.++..... .-+|||||++|.....+... ....++...+...+.+++ ++.+|.
T Consensus 65 ~il~~l----~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~ 140 (350)
T d1q5ka_ 65 QIMRKL----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140 (350)
T ss_dssp HHHHHC----CCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhc----CCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 555443 34444555554422211 13699999988654444322 233577766666666665 889999
Q ss_pred cCccccCCCCCCCCCC----eeEEecCCchhh
Q psy12972 559 TGFVHADPHSGNDVNT----WLYPVDLGDKFR 586 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~----~v~liDfG~~~~ 586 (1578)
.|++|||+||.|||+. .++++|||....
T Consensus 141 ~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~ 172 (350)
T d1q5ka_ 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172 (350)
T ss_dssp TTEECCCCCGGGEEECTTTCCEEECCCTTCEE
T ss_pred cCCcccCCCcceEEEecCCCceeEecccchhh
Confidence 9999999999999964 478999997643
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=2.1e-11 Score=138.18 Aligned_cols=141 Identities=15% Similarity=0.138 Sum_probs=93.3
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.+........ .. +. ...+.+|+
T Consensus 10 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~--------------~~-~~----------------~~~~~~E~ 58 (273)
T d1xwsa_ 10 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--------------EL-PN----------------GTRVPMEV 58 (273)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEE--------------EC-TT----------------CCEEEHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchh--------------hh-hH----------------HHHHHHHH
Confidence 5799999999999996 48999999998654211000 00 00 01134566
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCC-cCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGV-KISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~-~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
..+.++.. .++. |.+=.++ +....-++||||++|. .+.+... ....++..++...+.+++ ++.+|..|++|
T Consensus 59 ~il~~l~~---~h~nIv~~~~~~-~~~~~~~lv~e~~~~~~~l~~~~~-~~~~l~e~~~~~~~~qi~~al~~lH~~~iiH 133 (273)
T d1xwsa_ 59 VLLKKVSS---GFSGVIRLLDWF-ERPDSFVLILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEAVRHCHNCGVLH 133 (273)
T ss_dssp HHHHHHCS---SSCSBCCEEEEE-ECSSEEEEEEECCSSEEEHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHhcc---CCCCccEEEEEE-eeCCeEEEEEEeccCcchHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 66666642 2232 3333333 2234568999999874 4444322 345678777766666666 88999999999
Q ss_pred cCCCCCCCCCC----eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~----~v~liDfG~~~ 585 (1578)
||+||.|||+. .++++|||.+.
T Consensus 134 rDiKp~NIll~~~~~~vkl~DFG~a~ 159 (273)
T d1xwsa_ 134 RDIKDENILIDLNRGELKLIDFGSGA 159 (273)
T ss_dssp SCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred ccCcccceEEecCCCeEEECccccce
Confidence 99999999963 58999999763
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=7.1e-11 Score=138.12 Aligned_cols=136 Identities=16% Similarity=0.170 Sum_probs=94.8
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.+....... ..-.+.+|+
T Consensus 24 ~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~-----------------------------------~~~~~~~Ei 68 (348)
T d2gfsa1 24 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII-----------------------------------HAKRTYREL 68 (348)
T ss_dssp EECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHH-----------------------------------HHHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEECchhcChH-----------------------------------HHHHHHHHH
Confidence 6799999999999995 5899999999864322110 001235566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC----CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK----SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~----~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+.+.++ .+...|.+-.++... ....+++||++.|..|.++ +...+++..++...+.+++ ++.+|..|+
T Consensus 69 ~il~~l----~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~--~~~~~l~e~~~~~i~~qil~aL~~LH~~gi 142 (348)
T d2gfsa1 69 RLLKHM----KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI--VKCQKLTDDHVQFLIYQILRGLKYIHSADI 142 (348)
T ss_dssp HHHHHC----CCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHH--HTTCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhc----CCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhh--cccccccHHHHHHHHHHHHHHHHHHHhCCC
Confidence 666665 344445555555322 1234678888889999886 3456788887777776766 789999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|||+||.|||+. .++++|||...
T Consensus 143 iHrDiKp~NILi~~~~~~kl~dfg~a~ 169 (348)
T d2gfsa1 143 IHRDLKPSNLAVNEDCELKILDFGLAR 169 (348)
T ss_dssp CCCCCCGGGEEECTTCCEEECCC----
T ss_pred cccccCCccccccccccccccccchhc
Confidence 9999999999965 58899999753
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=6.6e-11 Score=136.58 Aligned_cols=149 Identities=16% Similarity=0.121 Sum_probs=98.9
Q ss_pred CChhhhccccCCcccccccceEEEEEEecC--C--CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHH
Q psy12972 397 CTHSQLFRSFDENPIAAASLAQVFRAVTKE--G--VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINE 472 (1578)
Q Consensus 397 ~~~~~iF~~fd~~PlasaSiaQVhrA~l~~--G--~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e 472 (1578)
.+.+.+-..|+ +-||.|++|.||+|++.+ | ..||||+........
T Consensus 22 ~~~~~~~~~~~-~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~------------------------------ 70 (311)
T d1r0pa_ 22 IGPSSLIVHFN-EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG------------------------------ 70 (311)
T ss_dssp CCGGGEEEEEE-EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHH------------------------------
T ss_pred eChHHceeccc-eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHH------------------------------
Confidence 44455555565 569999999999999764 2 268999875321110
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH
Q psy12972 473 LKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF 552 (1578)
Q Consensus 473 ~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~ 552 (1578)
..-+|.+|++.+.+++ |..-|.+=...-+.....++||||++|.++.++........+...+...+.++.
T Consensus 71 ------~~~~~~~E~~~l~~l~----HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia 140 (311)
T d1r0pa_ 71 ------EVSQFLTEGIIMKDFS----HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 140 (311)
T ss_dssp ------HHHHHHHHHHHHHTCC----CTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHhCC----CCCEeEEeEEEEecCCceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHH
Confidence 0123677777776653 333233323222222356899999999999887554444455555555554544
Q ss_pred --HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 553 --AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 553 --l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+..+|..|++|||+||.|||+. .+++.|||....
T Consensus 141 ~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~ 179 (311)
T d1r0pa_ 141 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 179 (311)
T ss_dssp HHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCC
T ss_pred HhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhh
Confidence 6789999999999999999975 589999997643
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.08 E-value=6.7e-11 Score=138.36 Aligned_cols=143 Identities=17% Similarity=0.278 Sum_probs=91.8
Q ss_pred hhhhccccCCcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.+.|..+ +.||.|++|.||+|+. .+|+.||||+.+....... ..+
T Consensus 16 ~~~~Y~~i--~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~-----------------------------~~~-- 62 (346)
T d1cm8a_ 16 VRAVYRDL--QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL-----------------------------FAK-- 62 (346)
T ss_dssp CBSSEEEE--EEC------CEEEEEETTTCCEEEEEECSSTTSSHH-----------------------------HHH--
T ss_pred cCCcEEEE--EEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChH-----------------------------HHH--
Confidence 44556655 5899999999999996 4799999999864322110 001
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCC-----CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKS-----STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF 552 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~-----t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~ 552 (1578)
.+.+|.+.++++ .+...|.+-.++.... ..-+|||||+ |..+.++ ....+++...+...+.+++
T Consensus 63 ----~~~~Ei~il~~l----~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~--~~~~~l~~~~~~~~~~qi~ 131 (346)
T d1cm8a_ 63 ----RAYRELRLLKHM----RHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKL--MKHEKLGEDRIQFLVYQML 131 (346)
T ss_dssp ----HHHHHHHHHHHC----CBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHH--HHHCCCCHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHhc----CCCCeeEEEEEeccCccccccceEEEEEecc-cccHHHH--HHhccccHHHHHHHHHHHH
Confidence 124455556554 2333344444443221 2348999999 6556554 3456788887777776666
Q ss_pred --HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 553 --AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 553 --l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++.+|..|++|||+||+|||+. .+++.|||...
T Consensus 132 ~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~ 169 (346)
T d1cm8a_ 132 KGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR 169 (346)
T ss_dssp HHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred HHHHHHHhCCCcccccCcchhhccccccccccccccee
Confidence 7889999999999999999964 58999999764
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.08 E-value=1.2e-10 Score=134.81 Aligned_cols=136 Identities=15% Similarity=0.073 Sum_probs=94.2
Q ss_pred cccccccceEEEEEEec-CCC----EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGV----EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~----~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|+||+|+.. +|+ +||||..++..... .+-.|
T Consensus 15 ~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~ 58 (317)
T d1xkka_ 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK------------------------------------ANKEI 58 (317)
T ss_dssp EEEEECSSEEEEEEEECC----CCEEEEEEEECC----C------------------------------------THHHH
T ss_pred eEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHH------------------------------------HHHHH
Confidence 68999999999999864 665 57888765432211 01135
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
.+|++.+.+++ |..-|.+=.+.. .....++|||+.|..+.+........++...+...+.++. +..+|..|+
T Consensus 59 ~~E~~~l~~l~----HpnIv~l~g~~~--~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~i 132 (317)
T d1xkka_ 59 LDEAYVMASVD----NPHVCRLLGICL--TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 132 (317)
T ss_dssp HHHHHHHHHCC----CTTBCCEEEEEE--SSSEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCC----CCCEeeEEEEEe--cCCeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCc
Confidence 67777777653 333344434442 3456799999999988876544455677777766666665 888999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|||++|.|||+. .+++.|||....
T Consensus 133 iHrDlKp~NIll~~~~~~kl~DFGla~~ 160 (317)
T d1xkka_ 133 VHRDLAARNVLVKTPQHVKITDFGLAKL 160 (317)
T ss_dssp CCSCCCGGGEEEEETTEEEECCCSHHHH
T ss_pred ccCcchhhcceeCCCCCeEeecccccee
Confidence 9999999999965 599999998643
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.07 E-value=1e-10 Score=134.80 Aligned_cols=137 Identities=17% Similarity=0.152 Sum_probs=95.1
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.||+|.||+|+.+ +++.||||+.+..... ..+..
T Consensus 26 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~------------------------------------~~~~~ 69 (308)
T d1p4oa_ 26 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM------------------------------------RERIE 69 (308)
T ss_dssp EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCH------------------------------------HHHHH
T ss_pred eEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccCh------------------------------------HHHHH
Confidence 67999999999999864 4789999988643211 11234
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------cCCCHHHHHHHHHHHH-
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------KGFSLADVDRKLFTAF- 552 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------~~~~~~~v~~~l~~~~- 552 (1578)
|.+|++.+.++ .+...|.+-.+. .......|||||++|.++.++..... ...+...+...+.++.
T Consensus 70 ~~~E~~il~~l----~h~nIv~~~~~~-~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~ 144 (308)
T d1p4oa_ 70 FLNEASVMKEF----NCHHVVRLLGVV-SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 144 (308)
T ss_dssp HHHHHHHGGGC----CCTTBCCEEEEE-CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc----CCCCEeeeeeEE-ecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHH
Confidence 56777776655 333334444443 23456789999999999988643221 1235555555555544
Q ss_pred -HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 553 -AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 553 -l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+..+|..|++|+|++|.|||+. .+++.|||....
T Consensus 145 gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~ 182 (308)
T d1p4oa_ 145 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 182 (308)
T ss_dssp HHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCG
T ss_pred HHHHHhhCCeeeceEcCCceeecCCceEEEeeccccee
Confidence 7889999999999999999965 589999998643
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.07 E-value=1.3e-10 Score=133.33 Aligned_cols=138 Identities=17% Similarity=0.134 Sum_probs=92.2
Q ss_pred cccccccceEEEEEEec--------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK--------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQE 480 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 480 (1578)
+.||.|++|+||+|+.. ++..||||+.+++.... ..
T Consensus 19 ~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~------------------------------------~~ 62 (299)
T d1fgka_ 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK------------------------------------DL 62 (299)
T ss_dssp EECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHH------------------------------------HH
T ss_pred eEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChH------------------------------------HH
Confidence 67999999999999853 23589999998654321 11
Q ss_pred HhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------cCCCHHHHH
Q psy12972 481 LDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------------KGFSLADVD 545 (1578)
Q Consensus 481 lDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------------~~~~~~~v~ 545 (1578)
-++.+|...+.++. .+..-|.+-.++.+ ...-++||||++|..+.++..... ..++...+.
T Consensus 63 ~~~~~e~~~l~~~~---~HpnIv~~~~~~~~-~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 138 (299)
T d1fgka_ 63 SDLISEMEMMKMIG---KHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 138 (299)
T ss_dssp HHHHHHHHHHHHHC---CCTTBCCEEEEECS-SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHH
T ss_pred HHHHHHHHHHHHhc---CCCeEEeccccccc-CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHH
Confidence 23566666666652 23333444444432 345689999999999998753221 236777776
Q ss_pred HHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 546 RKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 546 ~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
..+.++. ++.+|..|+||||++|.|||+. .+++.|||....
T Consensus 139 ~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~ 184 (299)
T d1fgka_ 139 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 184 (299)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSTTCCCC
T ss_pred HHHHHHHHHHHHhhhCCEEeeeecccceeecCCCCeEeccchhhcc
Confidence 6666655 7889999999999999999964 589999997643
|
| >d2djja1 c.47.1.2 (A:6-121) Protein disulfide isomerase, PDI {Fungi (Humicola insolens) [TaxId: 34413]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: PDI-like domain: Protein disulfide isomerase, PDI species: Fungi (Humicola insolens) [TaxId: 34413]
Probab=99.07 E-value=3.7e-11 Score=117.90 Aligned_cols=78 Identities=19% Similarity=0.292 Sum_probs=56.8
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCc-ce--ee-eeecccCccccccCCcccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGV-GF--FT-VHYDLFGTTDGFSGQDSASRN 824 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~v-g~--v~-~~~~~~~~~~~i~g~~~~~~~ 824 (1578)
.++..||++.+++ ++++|||.||||||+||++|+|+|+++|+.+.+... +. +. ......|....+.
T Consensus 6 ~lt~~nF~~~v~~--~~k~vlV~fya~wC~~Ck~~~p~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-------- 75 (116)
T d2djja1 6 VVVAKNYNEIVLD--DTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPDEIQ-------- 75 (116)
T ss_dssp ECCTTTTTTSSSC--TTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCSSCCS--------
T ss_pred EcccCCHHHHHhc--CCCCEEEEEEecccccccccchHHHHHHHHHhcccccceeEEEecccchhhhccccc--------
Confidence 5677899998864 678999999999999999999999999999987632 22 22 2222244343443
Q ss_pred ccccccCcccccccccc
Q psy12972 825 FHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 825 ~~~i~~~Ptiklf~~~~ 841 (1578)
.+||+.+|..+-
T Consensus 76 -----~~Pti~~f~~g~ 87 (116)
T d2djja1 76 -----GFPTIKLYPAGA 87 (116)
T ss_dssp -----SSSEEEEECSSC
T ss_pred -----CCCEEEEEECCc
Confidence 449998887653
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.07 E-value=1.2e-10 Score=131.91 Aligned_cols=138 Identities=20% Similarity=0.164 Sum_probs=91.0
Q ss_pred cccccccceEEEEEEec--CC--CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK--EG--VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--~G--~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+-||.||+|+||+|+.. +| .+||||+..++.... + + ..-+|.
T Consensus 14 ~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~---~-------------------------~------~~~~~~ 59 (273)
T d1u46a_ 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ---P-------------------------E------AMDDFI 59 (273)
T ss_dssp EECC----CCCEEEEEECTTSCEEEEEEEC-----------C-------------------------H------HHHHHH
T ss_pred EEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCC---H-------------------------H------HHHHHH
Confidence 46999999999999864 33 478999876543211 0 0 011467
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.+++ +..-|.+=.++. ...-+|||||++|..+.+........++...+...+.++. ++.+|..|++
T Consensus 60 ~Ei~~l~~l~----H~nIv~~~g~~~--~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ii 133 (273)
T d1u46a_ 60 REVNAMHSLD----HRNLIRLYGVVL--TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 133 (273)
T ss_dssp HHHHHHHHCC----CTTBCCEEEEEC--SSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhCC----CCCEEEEEEEEe--ecchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEe
Confidence 7777776653 333344434332 2345899999999998887655555688888877777766 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|||++|.|||+. .+++.|||....
T Consensus 134 HrDikp~NIll~~~~~vkl~DfGl~~~ 160 (273)
T d1u46a_ 134 HRDLAARNLLLATRDLVKIGDFGLMRA 160 (273)
T ss_dssp CSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeeecHHHhccccccceeeccchhhhh
Confidence 999999999964 589999997643
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=1.2e-10 Score=133.45 Aligned_cols=146 Identities=20% Similarity=0.217 Sum_probs=94.2
Q ss_pred hhccccCCcccccccceEEEEEEe-cC-CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHH
Q psy12972 401 QLFRSFDENPIAAASLAQVFRAVT-KE-GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLE 478 (1578)
Q Consensus 401 ~iF~~fd~~PlasaSiaQVhrA~l-~~-G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 478 (1578)
+-|+-+ +.||+|++|.||+|+. ++ |+.||||+.+......- .
T Consensus 7 ~~Y~i~--~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~--------------------~-------------- 50 (305)
T d1blxa_ 7 QQYECV--AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG--------------------M-------------- 50 (305)
T ss_dssp GTEEEE--EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS--------------------C--------------
T ss_pred CCEEEE--EEEecccCeEEEEEEEECCCCEEEEEEEEehhhccch--------------------H--------------
Confidence 334444 5699999999999996 44 67899999875432210 0
Q ss_pred HHHhHHHHHHHHHHHHHhhCCCCCeeecEEee----CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--
Q psy12972 479 QELDFLNEGRNAERCSKDLAHLPYVYIPRILW----DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 479 ~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~----~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~-- 552 (1578)
...+.+|.+.++.+.. +.+..-|.+=.++. +..+.-+|+|||++|..+.........+++...+...+.+++
T Consensus 51 -~~~~~~E~~~l~~l~~-~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~a 128 (305)
T d1blxa_ 51 -PLSTIREVAVLRHLET-FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 128 (305)
T ss_dssp -BCTHHHHHHHHHHHHH-TCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHhh-cCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHH
Confidence 0012344444444432 12222233322221 112345799999999877654444455677776666666655
Q ss_pred HHHHHHcCccccCCCCCCCCCC---eeEEecCCch
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
++.+|..|++|||+||.|||+. .+++.|||..
T Consensus 129 L~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~ 163 (305)
T d1blxa_ 129 LDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 163 (305)
T ss_dssp HHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred HHHHHhCCEEecCCCccEEEEcCCCCeeecchhhh
Confidence 7889999999999999999964 5899999975
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.03 E-value=1.3e-10 Score=132.18 Aligned_cols=137 Identities=19% Similarity=0.126 Sum_probs=93.3
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.+...... . ....+.+|.
T Consensus 8 ~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~--~---------------------------------~~~~~~~E~ 52 (292)
T d1unla_ 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE--G---------------------------------VPSSALREI 52 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSST--T---------------------------------HHHHHHHHH
T ss_pred eEEecCcCeEEEEEEECCCCcEEEEEEEehhhCCh--H---------------------------------HHHHHHHHH
Confidence 5799999999999996 489999999986432110 0 001234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++ .+..-|.+-..+ ......++|||++.|..+..+.. ....++...+...+.+++ ++.+|..|++|+|
T Consensus 53 ~il~~l----~h~niv~~~~~~-~~~~~~~iv~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrD 126 (292)
T d1unla_ 53 CLLKEL----KHKNIVRLHDVL-HSDKKLTLVFEFCDQDLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRD 126 (292)
T ss_dssp HHHTTC----CCTTBCCEEEEE-ECSSEEEEEEECCSEEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhc----CcCCEEeecccc-ccccceeEEeeeccccccccccc-cccccchhHHHHHHHHHHHHHHHhhcCCEeeec
Confidence 555443 233223333333 23345689999999988876532 334566666666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
+||+|||+. .++++|||....
T Consensus 127 iKP~NIli~~~~~~kl~DFG~a~~ 150 (292)
T d1unla_ 127 LKPQNLLINRNGELKLANFGLARA 150 (292)
T ss_dssp CSGGGEEECTTCCEEECCCTTCEE
T ss_pred ccCcccccccCCceeeeecchhhc
Confidence 999999964 589999997643
|
| >d2fwha1 c.47.1.1 (A:428-544) Thiol:disulfide interchange protein DsbD, C-terminal domain (DsbD-gamma) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thiol:disulfide interchange protein DsbD, C-terminal domain (DsbD-gamma) species: Escherichia coli [TaxId: 562]
Probab=99.03 E-value=2.3e-10 Score=112.35 Aligned_cols=97 Identities=19% Similarity=0.380 Sum_probs=73.7
Q ss_pred ccccceecccCCCCcEEEEEEcCCCcccccccHHH---HHHHHHhCCCceEEEEEECcc----chhhHhHcCccccCCcE
Q psy12972 861 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVHN----EQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 861 ~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~---~~lA~~l~~~~v~~a~VDc~~----~~~L~~k~gV~~~~PTl 933 (1578)
++++..+. ...+++++|.|||+||++|+.+.|.+ .++.+.+.+ +.+..+|++. +.+++++|+|.+ +||+
T Consensus 11 ~~~~~~l~-~~~gK~vlv~F~a~wC~~C~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~v~~-~Pt~ 86 (117)
T d2fwha1 11 DELNQALV-EAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD--TVLLQANVTANDAQDVALLKHLNVLG-LPTI 86 (117)
T ss_dssp HHHHHHHH-HHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT--SEEEEEECTTCCHHHHHHHHHTTCCS-SSEE
T ss_pred HHHHHHHH-HcCCCeEEEEEecccCCcccccchhHHhHHHHHHhccc--eEEEecccccchhHHHHHHhhhehhh-ceEE
Confidence 34444433 23478999999999999999999988 455555543 5677777643 457999999998 9999
Q ss_pred EEE-cCCcccc--ccCCCCCHHHHHHHHHhh
Q psy12972 934 ALL-TDGRTSF--FKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 934 ~lf-~~G~~~~--y~~G~~s~~~L~~fi~~~ 961 (1578)
++| ++|+... ...|.++++++.++++++
T Consensus 87 ~~~~~~G~~~~~~~~~G~~~~~~~~~~l~~~ 117 (117)
T d2fwha1 87 LFFDGQGQEHPQARVTGFMDAETFSAHLRDR 117 (117)
T ss_dssp EEECTTSCBCGGGCBCSCCCHHHHHHHHHHC
T ss_pred EEEeCCCcEEecccccccCCHHHHHHHHhcC
Confidence 999 6787553 346899999999999763
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.00 E-value=1.6e-10 Score=129.91 Aligned_cols=134 Identities=18% Similarity=0.133 Sum_probs=90.4
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+. .|++||||+.+..-. .+ +|.+|++
T Consensus 13 ~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~~---------------------------------~~------~~~~E~~ 52 (262)
T d1byga_ 13 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDAT---------------------------------AQ------AFLAEAS 52 (262)
T ss_dssp EEEEECSSCEEEEEEE-TTEEEEEEECCCCC-----------------------------------H------HHHHTHH
T ss_pred EEEecCCCeEEEEEEE-CCeEEEEEEECcHHH---------------------------------HH------HHHHHHH
Confidence 5699999999999998 588999999853210 00 2456666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.+++ +..-|.+=.+..+-...-.|||||++|.+|.++..-. ...++...+...+.++. +..+|..|++|+|
T Consensus 53 ~l~~l~----HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~d 128 (262)
T d1byga_ 53 VMTQLR----HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 128 (262)
T ss_dssp HHTTCC----CTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHhCC----CCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccc
Confidence 665542 3322333333322223347999999999999875322 22467766666665555 7789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .+++.|||....
T Consensus 129 lkp~Nil~~~~~~~kl~dfg~s~~ 152 (262)
T d1byga_ 129 LAARNVLVSEDNVAKVSDFGLTKE 152 (262)
T ss_dssp CSGGGEEECTTSCEEECCCCC---
T ss_pred cchHhheecCCCCEeeccccccee
Confidence 999999965 488999997653
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.00 E-value=2.4e-10 Score=131.19 Aligned_cols=132 Identities=17% Similarity=0.092 Sum_probs=85.9
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+-||.|++|+||+|++ +|+.||||+.+..-... ..++.|..
T Consensus 9 ~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~~~~--------------------------------------~~~e~ei~ 49 (303)
T d1vjya_ 9 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERS--------------------------------------WFREAEIY 49 (303)
T ss_dssp EEEECCSSSEEEEEEE-TTEEEEEEEECGGGHHH--------------------------------------HHHHHHHH
T ss_pred EEEeeCCCeEEEEEEE-CCEEEEEEEECccchhH--------------------------------------HHHHHHHH
Confidence 4599999999999986 79999999875432110 00112222
Q ss_pred HHHHHHHhhCCCCCeeecEEeeC-C-C-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-----
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWD-K-S-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ----- 558 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~-~-~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~----- 558 (1578)
.+.+ +.|..-|.+=.+..+ . . ..-+|||||++|.+|.++ +...+++.........++. +..+|.
T Consensus 50 ~~~~----~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~--l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~ 123 (303)
T d1vjya_ 50 QTVM----LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDY--LNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 123 (303)
T ss_dssp TSTT----CCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHH--HHHCCBCHHHHHHHHHHHHHHHHHHHCCBCST
T ss_pred HHhh----CCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 2222 122222332222211 1 1 134799999999999987 4556788777666666655 555664
Q ss_pred ---cCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 559 ---TGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 559 ---~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
.|++|+|++|.|||+. .+++.|||...
T Consensus 124 ~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~ 156 (303)
T d1vjya_ 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp TCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred ccCCCeeccccCccceEEcCCCCeEEEecCccc
Confidence 5999999999999975 58999999653
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.96 E-value=3e-10 Score=130.71 Aligned_cols=136 Identities=17% Similarity=0.105 Sum_probs=91.7
Q ss_pred cccccccceEEEEEEec-CCC--EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGV--EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~--~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
+.||.||+|.||+|+.+ +|. .||||..+...... ..-+|.+
T Consensus 16 ~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~~ 59 (309)
T d1fvra_ 16 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD------------------------------------DHRDFAG 59 (309)
T ss_dssp EEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------------------------------------------CHHHH
T ss_pred EEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChH------------------------------------HHHHHHH
Confidence 67999999999999976 565 46677654322110 0113567
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh---------------hcCCCHHHHHHHHHH
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL---------------EKGFSLADVDRKLFT 550 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~---------------~~~~~~~~v~~~l~~ 550 (1578)
|++.+.++. .|..-|.+=.++. ..+.-+|||||++|.+|.++.... ...++...+...+.+
T Consensus 60 E~~~l~~l~---~HpnIv~~~~~~~-~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q 135 (309)
T d1fvra_ 60 ELEVLCKLG---HHPNIINLLGACE-HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 135 (309)
T ss_dssp HHHHHTTCC---CCTTBCCEEEEEE-ETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHH
T ss_pred HHHHHHhcc---CCCCEeeEEEEEe-cCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHH
Confidence 777776652 1222344433332 234568999999999999874311 234666666666655
Q ss_pred HH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCch
Q psy12972 551 AF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 551 ~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
+. +..+|..|++|||++|.|||+. .+++.|||..
T Consensus 136 ia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a 174 (309)
T d1fvra_ 136 VARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 174 (309)
T ss_dssp HHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCE
T ss_pred HHHHHHhhhcCCccccccccceEEEcCCCceEEcccccc
Confidence 55 7889999999999999999965 5899999975
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.94 E-value=8.1e-10 Score=129.57 Aligned_cols=134 Identities=16% Similarity=0.141 Sum_probs=89.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+......- + ...+.+|.
T Consensus 23 ~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~--~---------------------------------~~~~~~Ei 67 (355)
T d2b1pa1 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT--H---------------------------------AKRAYREL 67 (355)
T ss_dssp EECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHH--H---------------------------------HHHHHHHH
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHH--H---------------------------------HHHHHHHH
Confidence 68999999999999965 799999999864332110 0 01234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEee-----CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW-----DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~-----~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
..++++ .+..-|..=.++. +..+.-+|||||+.|..+..+ ...++...+...+.+++ +..+|..|
T Consensus 68 ~il~~l----~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~----~~~~~~~~i~~~~~qil~gl~~LH~~g 139 (355)
T d2b1pa1 68 VLMKCV----NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQMLCGIKHLHSAG 139 (355)
T ss_dssp HHHHHC----CCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhc----CCCCeeEEEEEEecccccccCceeEEEEeccchHHHHhh----hcCCCHHHHHHHHHHHHHHHHHhhhcc
Confidence 666554 2322233333332 122445799999988655443 35677777777666666 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|+||.|||+. .++++|||...
T Consensus 140 iiHrDlKP~Nil~~~~~~~kl~df~~~~ 167 (355)
T d2b1pa1 140 IIHRDLKPSNIVVKSDCTLKILDFGLAR 167 (355)
T ss_dssp CCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred cccccCCccccccccccceeeechhhhh
Confidence 99999999999965 48999999653
|
| >d2b5ea1 c.47.1.2 (A:365-504) Protein disulfide isomerase, PDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: PDI-like domain: Protein disulfide isomerase, PDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.93 E-value=7.7e-11 Score=119.79 Aligned_cols=79 Identities=18% Similarity=0.278 Sum_probs=59.8
Q ss_pred ccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC--Ccceeeeeecc-cCccccccCCccccc
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHYDL-FGTTDGFSGQDSASR 823 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~--~vg~v~~~~~~-~~~~~~i~g~~~~~~ 823 (1578)
...++..||++.+.. ++++|||.||||||+||+++.|+|+++|+.+++. .+.+++++... .|...++.+
T Consensus 14 V~~l~~~nf~~~v~~--~~k~vlV~F~a~wC~~C~~~~p~~~~la~~~~~~~~~v~~~~~d~~~~~~~~~~v~~------ 85 (140)
T d2b5ea1 14 VFQLVGKNHDEIVND--PKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVRGVVIEG------ 85 (140)
T ss_dssp EEEECTTTHHHHHHC--TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCSSCCCSS------
T ss_pred cEEecCcCHHHHHhc--CCCCEEEEEEeccCcccchhHHHHHHHHHHHhccccceEEEeeeccchhcccccccc------
Confidence 456788899998854 4678999999999999999999999999999765 34554444332 444444444
Q ss_pred cccccccCccccccccc
Q psy12972 824 NFHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 824 ~~~~i~~~Ptiklf~~~ 840 (1578)
+||+.+|+.|
T Consensus 86 -------~Ptl~~f~~g 95 (140)
T d2b5ea1 86 -------YPTIVLYPGG 95 (140)
T ss_dssp -------SSEEEEECCT
T ss_pred -------CCeEEEEECC
Confidence 4999998865
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.90 E-value=1e-09 Score=127.01 Aligned_cols=140 Identities=14% Similarity=0.137 Sum_probs=93.5
Q ss_pred cccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+.. +|+.||||+........=..+ .-.+.
T Consensus 30 ~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~---------------------------------~~~~~ 76 (322)
T d1vzoa_ 30 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKT---------------------------------TEHTR 76 (322)
T ss_dssp EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESS---------------------------------GGGCC
T ss_pred EEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHH---------------------------------HHHHH
Confidence 68999999999999852 589999999764321000000 00135
Q ss_pred HHHHHHHHHHHhhCCCCCe-eecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 485 NEGRNAERCSKDLAHLPYV-YIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v-~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+|++.+.++++ .+.| .+=..+ +-...-+++|||++|..|.+... .........+...+.+++ ++.+|..|+
T Consensus 77 ~E~~il~~l~h----~pnIv~~~~~~-~~~~~~~~v~e~~~~~~L~~~i~-~~~~~~e~~~~~~~~Qi~~al~~lH~~~i 150 (322)
T d1vzoa_ 77 TERQVLEHIRQ----SPFLVTLHYAF-QTETKLHLILDYINGGELFTHLS-QRERFTEHEVQIYVGEIVLALEHLHKLGI 150 (322)
T ss_dssp CHHHHHHHHHT----CTTBCCEEEEE-EETTEEEEEECCCCSCBHHHHHH-HHSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhccC----CCeEEEeeeee-ccCCceeeeeecccccHHHHHHH-hcccccHHHHHHHHHHHHHHHHHhhcCCE
Confidence 67777777763 3322 211122 22345579999999999987643 233455555555554544 788999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+|+|++|.|||+. .++++|||....+
T Consensus 151 vHrDiKp~Nill~~~~~vkL~DFG~a~~~ 179 (322)
T d1vzoa_ 151 IYRDIKLENILLDSNGHVVLTDFGLSKEF 179 (322)
T ss_dssp CCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred EeccCCccceeecCCCCEEEeeccchhhh
Confidence 9999999999964 6999999976443
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.90 E-value=8.5e-10 Score=127.16 Aligned_cols=138 Identities=21% Similarity=0.218 Sum_probs=89.6
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.+..-.. ... ..++.+|.
T Consensus 16 ~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~--------------------~~~---------------~~~~~~E~ 60 (318)
T d3blha1 16 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--------------------EGF---------------PITALREI 60 (318)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC----CT--------------------TSS---------------CHHHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc--------------------hHH---------------HHHHHHHH
Confidence 6799999999999996 58999999986432110 000 01234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-------CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-------STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-------t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
+.++++ .+...+.+..++.... ..-.|||||+++..+.... ......+...+...+.+++ ++.+|.
T Consensus 61 ~il~~l----~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~-~~~~~~~~~~~~~i~~qil~~l~~lH~ 135 (318)
T d3blha1 61 KILQLL----KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNGLYYIHR 135 (318)
T ss_dssp HHHHHC----CCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHT-CTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHh----cCCCccceEeeeecccccccccCceEEEEEeccCCCccchhh-hcccccccHHHHHHHHHHHHHHHHhcc
Confidence 666655 3444445445443211 2246999999876654332 2234556665555555444 788999
Q ss_pred cCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 559 TGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
.|++|||++|.|||+. .+++.|||....
T Consensus 136 ~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~ 166 (318)
T d3blha1 136 NKILHRDMKAANVLITRDGVLKLADFGLARA 166 (318)
T ss_dssp TTEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred CCEEecCcCchheeecCCCcEEeeecceeee
Confidence 9999999999999965 589999997643
|
| >d2b5ea4 c.47.1.2 (A:23-141) Protein disulfide isomerase, PDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: PDI-like domain: Protein disulfide isomerase, PDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.88 E-value=1.4e-10 Score=114.55 Aligned_cols=77 Identities=14% Similarity=0.265 Sum_probs=56.9
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCcccccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRN 824 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~ 824 (1578)
+.+++.||++.+ .+++.|||.||||||+||+++.|+|+++|+.+++..+.++.++++. +|....+
T Consensus 13 ~~lt~~~f~~~i---~~~~~~lV~fya~wC~~C~~~~~~~~~la~~~~~~~v~~~~vd~~~~~~l~~~~~v--------- 80 (119)
T d2b5ea4 13 VKLATDSFNEYI---QSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNI--------- 80 (119)
T ss_dssp EECCTTTHHHHH---TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTC---------
T ss_pred EEcCHHHHHHHH---hcCCeEEEEEECCccCcccccchhhhhhhhhhcccceeeeeeeccchHHHHHHhcc---------
Confidence 467788998876 3567999999999999999999999999999976554443333222 3444444
Q ss_pred ccccccCccccccccc
Q psy12972 825 FHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 825 ~~~i~~~Ptiklf~~~ 840 (1578)
..+||+.+|+.|
T Consensus 81 ----~~~Pti~~f~~g 92 (119)
T d2b5ea4 81 ----PGFPSLKIFKNS 92 (119)
T ss_dssp ----CSSSEEEEEETT
T ss_pred ----ccCCeEEEEECC
Confidence 444999898765
|
| >d1thxa_ c.47.1.1 (A:) Thioredoxin {Anabaena sp., pcc 7120 [TaxId: 1167]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Anabaena sp., pcc 7120 [TaxId: 1167]
Probab=98.87 E-value=1.8e-10 Score=111.50 Aligned_cols=79 Identities=18% Similarity=0.311 Sum_probs=58.3
Q ss_pred ccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeecc-cCccccccCCcccccc
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYDL-FGTTDGFSGQDSASRN 824 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~~-~~~~~~i~g~~~~~~~ 824 (1578)
...+|+.||+..+.+ ++++++|.||||||+||+++.|.|+++++++.+. .+..++|..+. +|+..++.+
T Consensus 4 V~~lt~~~f~~~v~~--~~~~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~I~~------- 74 (108)
T d1thxa_ 4 VITITDAEFESEVLK--AEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEG------- 74 (108)
T ss_dssp EEECCGGGHHHHTTT--CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCS-------
T ss_pred ceECCHHHHHHHHHh--CCCcEEEEEECCCCCCccccchHHHHHHHhcCCcceeceecccccHHHHHHhcccC-------
Confidence 346778899988864 5789999999999999999999999999999864 34333332221 444444444
Q ss_pred ccccccCccccccccc
Q psy12972 825 FHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 825 ~~~i~~~Ptiklf~~~ 840 (1578)
.||+.+|.+|
T Consensus 75 ------~Pt~~~~~~g 84 (108)
T d1thxa_ 75 ------VPALRLVKGE 84 (108)
T ss_dssp ------SSEEEEEETT
T ss_pred ------CCEEEEEECC
Confidence 4998888755
|
| >d1meka_ c.47.1.2 (A:) Protein disulfide isomerase, PDI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: PDI-like domain: Protein disulfide isomerase, PDI species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.86 E-value=3e-10 Score=112.06 Aligned_cols=79 Identities=23% Similarity=0.370 Sum_probs=57.3
Q ss_pred hccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCC--cceeeeeecc---cCccccccCCcc
Q psy12972 746 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG--VGFFTVHYDL---FGTTDGFSGQDS 820 (1578)
Q Consensus 746 ~k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~--vg~v~~~~~~---~~~~~~i~g~~~ 820 (1578)
+...+++.||++.+ ++++++||.||||||+||+++.|.|+++++.+++.+ +.++.++++. +|...
T Consensus 8 ~V~~l~~~~f~~~l---~~~k~vlV~Fya~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~------- 77 (120)
T d1meka_ 8 HVLVLRKSNFAEAL---AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQY------- 77 (120)
T ss_dssp TEEECCTTTHHHHH---HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHH-------
T ss_pred CeEEcCHHHHHHHH---hcCCcEEEEEECCCcCCccccchhhhhhcccccccccceeeeccccccchhHHHHh-------
Confidence 34567788998766 357899999999999999999999999999998653 4443333222 33333
Q ss_pred ccccccccccCccccccccc
Q psy12972 821 ASRNFHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 821 ~~~~~~~i~~~Ptiklf~~~ 840 (1578)
++..+||+.+|..|
T Consensus 78 ------~i~~~Pt~~~~~~G 91 (120)
T d1meka_ 78 ------GVRGYPTIKFFRNG 91 (120)
T ss_dssp ------TCCSSSEEEEEESS
T ss_pred ------CCccCCeEEEEECC
Confidence 34445999888765
|
| >d1nw2a_ c.47.1.1 (A:) Thioredoxin {Alicyclobacillus acidocaldarius, formerly Bacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Alicyclobacillus acidocaldarius, formerly Bacillus acidocaldarius [TaxId: 405212]
Probab=98.85 E-value=1.5e-10 Score=111.62 Aligned_cols=79 Identities=20% Similarity=0.374 Sum_probs=58.7
Q ss_pred ccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeecc-cCccccccCCcccccc
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYDL-FGTTDGFSGQDSASRN 824 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~~-~~~~~~i~g~~~~~~~ 824 (1578)
++++|+.||++.+ +++++++|.||||||++|+.+.|.|+++++++++. .+..++|.... +|...++.+.
T Consensus 2 ~i~lt~~~f~~~i---~~~k~vvv~F~a~wC~~C~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~~V~~~------ 72 (105)
T d1nw2a_ 2 TMTLTDANFQQAI---QGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSI------ 72 (105)
T ss_dssp CEEECTTTHHHHT---TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCBS------
T ss_pred EEEECHHHHHHHH---hCCCcEEEEEECCCCCCcccccchhhhhhhhcCCceEEEEEECCCCcccHHHCCccee------
Confidence 4577888999766 46789999999999999999999999999999863 33333332221 4444455444
Q ss_pred ccccccCcccccccccc
Q psy12972 825 FHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 825 ~~~i~~~Ptiklf~~~~ 841 (1578)
||+.+|.+|-
T Consensus 73 -------Pt~~~~~~G~ 82 (105)
T d1nw2a_ 73 -------PTLILFKGGE 82 (105)
T ss_dssp -------SEEEEEETTE
T ss_pred -------eEEEEEECCE
Confidence 9998888664
|
| >d2c0ga2 c.47.1.7 (A:1024-1145) Windbeutel, N-terminal domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: ERP29 N domain-like domain: Windbeutel, N-terminal domain species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.85 E-value=2.4e-10 Score=113.36 Aligned_cols=45 Identities=11% Similarity=0.081 Sum_probs=39.0
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL 797 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~ 797 (1578)
+.|++.||++.+ ++++.+||+||||||+||| .|+|+++|+.++..
T Consensus 5 v~L~~~nFd~~v---~~~~~~lV~Fya~wC~~ck--~p~f~kla~~~~~~ 49 (122)
T d2c0ga2 5 VDLDELSFEKTV---ERFPYSVVKFDIASPYGEK--HEAFTAFSKSAHKA 49 (122)
T ss_dssp EECCTTTHHHHH---TTSSEEEEEEEESSCCSHH--HHHHHHHHHHHHHH
T ss_pred EEcChHhHHHHH---hcCCcEEEEEECCCCCccc--CHHHHHHHHHHHHh
Confidence 468888999999 3467899999999999999 59999999998643
|
| >d2trcp_ c.47.1.6 (P:) Phosducin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Phosducin domain: Phosducin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.84 E-value=6.9e-10 Score=120.96 Aligned_cols=102 Identities=16% Similarity=0.180 Sum_probs=81.6
Q ss_pred EEeec-cccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 855 KLSTT-HWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~Lt-~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+.+++ .++|.+.+...+.+..++|.||+|||++|+.+.|.+.++|..+.. ++|++||++..+ +..+|+|.+ .|||
T Consensus 101 v~~i~~~~~f~~~v~~~~~~~~Vvvhfy~~~~~~C~~~~~~l~~lA~~~~~--vkF~ki~~~~~~-~~~~~~i~~-lPtl 176 (217)
T d2trcp_ 101 VYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPM--VKFCKIRASNTG-AGDRFSSDV-LPTL 176 (217)
T ss_dssp EEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCTT--SEEEEEEHHHHT-CSTTSCGGG-CSEE
T ss_pred EEEcCCHHHHHHHHHhcCCCCeEEEEEEcCCCCChhhhhhhHHHHhhhccc--ceEEEEccccch-hHHhCCCCC-CCeE
Confidence 44564 578988887666677899999999999999999999999999864 899999998654 668999997 9999
Q ss_pred EEEcCCccccccCC-------CCCHHHHHHHHHh
Q psy12972 934 ALLTDGRTSFFKEP-------SFSVQKMVEFFRL 960 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G-------~~s~~~L~~fi~~ 960 (1578)
++|++|+.+....| ..+.++|..|+.+
T Consensus 177 ~~yk~G~~v~~~vg~~~~~g~~~~~~~lE~~L~~ 210 (217)
T d2trcp_ 177 LVYKGGELISNFISVAEQFAEDFFAADVESFLNE 210 (217)
T ss_dssp EEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHT
T ss_pred EEEECCEEEEEEECccccccccCCHHHHHHHHHH
Confidence 99999986644433 3445666666654
|
| >d1fb6a_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea), thioredoxin M [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Spinach (Spinacia oleracea), thioredoxin M [TaxId: 3562]
Probab=98.83 E-value=2.2e-10 Score=110.18 Aligned_cols=78 Identities=18% Similarity=0.324 Sum_probs=57.1
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeecc-cCccccccCCcccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYDL-FGTTDGFSGQDSASRNFH 826 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~~-~~~~~~i~g~~~~~~~~~ 826 (1578)
.+++.||++.+.. ++++++|.||||||+||+++.|.|+++++.+.+. ....+++..+. +|+..++.+.
T Consensus 3 el~d~~f~~~v~~--~~~~vlv~F~a~wC~~C~~~~~~~~~l~~~~~~~~~~~~v~~d~~~~l~~~~~V~~~-------- 72 (104)
T d1fb6a_ 3 DVNDSSWKEFVLE--SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSI-------- 72 (104)
T ss_dssp ECCTTTHHHHTTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSS--------
T ss_pred ECchhhHHHHHHc--CCCcEEEEEEcCccCCccccCchhHHHHHhhcCccceeEEecccchhhhhhcceeee--------
Confidence 4677889998854 5789999999999999999999999999999775 22222332211 4445455444
Q ss_pred ccccCcccccccccc
Q psy12972 827 NHMYNPFDDVFSEGF 841 (1578)
Q Consensus 827 ~i~~~Ptiklf~~~~ 841 (1578)
||+.+|.+|-
T Consensus 73 -----Pt~~~~~~G~ 82 (104)
T d1fb6a_ 73 -----PTVLFFKNGE 82 (104)
T ss_dssp -----SEEEEEETTE
T ss_pred -----eEEEEEEcCe
Confidence 9988887653
|
| >d2trxa_ c.47.1.1 (A:) Thioredoxin {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Escherichia coli [TaxId: 562]
Probab=98.81 E-value=3e-10 Score=109.87 Aligned_cols=78 Identities=21% Similarity=0.388 Sum_probs=56.7
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCcccccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRN 824 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~ 824 (1578)
..+++.||++.+.. ++++++|.||||||+||+.+.|.|.++|+++.+. +.++.++.+. +|...++.
T Consensus 5 ~~lt~~~f~~~v~~--~~~~v~v~F~a~wC~~C~~~~~~~~~~a~~~~~~-~~~~~vd~d~~~~l~~~~~v~-------- 73 (108)
T d2trxa_ 5 IHLTDDSFDTDVLK--ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQNPGTAPKYGIR-------- 73 (108)
T ss_dssp EECCTTTHHHHTTT--CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTTCTTHHHHTTCC--------
T ss_pred eECCHHHHHHHHHh--CCCcEEEEEECCCCCCccccCcHHHHHHHHhhcc-eeeeeccccchhhHHHHhCCC--------
Confidence 45677899988864 5789999999999999999999999999987654 2233333332 33444444
Q ss_pred ccccccCcccccccccc
Q psy12972 825 FHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 825 ~~~i~~~Ptiklf~~~~ 841 (1578)
.+||+.+|..|-
T Consensus 74 -----~~PT~~~~~~G~ 85 (108)
T d2trxa_ 74 -----GIPTLLLFKNGE 85 (108)
T ss_dssp -----SSSEEEEEETTE
T ss_pred -----cEEEEEEEECCE
Confidence 449988887663
|
| >d1dbya_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Chlamydomonas reinhardtii [TaxId: 3055]
Probab=98.80 E-value=2.2e-10 Score=110.76 Aligned_cols=78 Identities=18% Similarity=0.337 Sum_probs=57.1
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeecc-cCccccccCCcccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYDL-FGTTDGFSGQDSASRNFH 826 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~~-~~~~~~i~g~~~~~~~~~ 826 (1578)
.+++.||++.+.. ++++|+|.||||||+||+++.|.|+++++++.+. .+..++|.... +|+..++.+
T Consensus 5 ~i~~~~f~~~v~~--s~kpvlv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~V~~--------- 73 (107)
T d1dbya_ 5 AVNDDTFKNVVLE--SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRS--------- 73 (107)
T ss_dssp EECHHHHHHHTTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCS---------
T ss_pred EecHHHHHHHHHh--CCCcEEEEEECCCCCCccccChHHHHHHHhhcccceEEEEecccchhHHHHhcccc---------
Confidence 4566789888854 6789999999999999999999999999998765 33333332221 444444444
Q ss_pred ccccCcccccccccc
Q psy12972 827 NHMYNPFDDVFSEGF 841 (1578)
Q Consensus 827 ~i~~~Ptiklf~~~~ 841 (1578)
+||+.+|.+|-
T Consensus 74 ----~Pt~~~~~~G~ 84 (107)
T d1dbya_ 74 ----IPTIMVFKGGK 84 (107)
T ss_dssp ----SCEEEEESSSS
T ss_pred ----eEEEEEEECCe
Confidence 49998887653
|
| >d1a8ya1 c.47.1.3 (A:3-126) Calsequestrin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Calsequestrin domain: Calsequestrin species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.76 E-value=7.8e-10 Score=109.84 Aligned_cols=85 Identities=16% Similarity=0.106 Sum_probs=55.6
Q ss_pred ccccccccccccccCCccCccceecccccccccc------ccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccC
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFAC------LQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSG 817 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghC------k~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g 817 (1578)
.+.+++.||++.+. +++.|+|.||||||||| +.+.+.++++|+.+++.++.++.++++. +|...++.+
T Consensus 13 V~~L~~~nf~~~l~---~~~~~~V~FyapwC~~~~~~~~~~~~~~~~~~~a~~~~~~~v~~a~Vd~~~~~~l~~~~~I~~ 89 (124)
T d1a8ya1 13 VINVNAKNYKNVFK---KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLTE 89 (124)
T ss_dssp CEECCTTTHHHHHH---HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEETTTSHHHHHTTTCCS
T ss_pred cEECCHHHHHHHHH---hCCeEEEEEECCCccchhhhhHHHHHHHHHHHHHHHhccCCeEEEEEEeecccchhhcccccc
Confidence 35788889988873 45679999999999985 3444445555666655544443333222 555555555
Q ss_pred CccccccccccccCccccccccccccCccC
Q psy12972 818 QDSASRNFHNHMYNPFDDVFSEGFNFPFEE 847 (1578)
Q Consensus 818 ~~~~~~~~~~i~~~Ptiklf~~~~~~~~~~ 847 (1578)
+ ||+.+|..+....|++
T Consensus 90 y-------------PTi~~f~~g~~~~y~G 106 (124)
T d1a8ya1 90 E-------------DSIYVFKEDEVIEYDG 106 (124)
T ss_dssp T-------------TCEEEEESSSEEECCS
T ss_pred C-------------CcEEEeccCccEEeeC
Confidence 5 9999998775544544
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.71 E-value=4.1e-09 Score=123.26 Aligned_cols=145 Identities=15% Similarity=0.135 Sum_probs=80.3
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.||+|+||+|+. .+|+.|||||.+..-.. .+...+|++...+.
T Consensus 19 ~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~--------------------------------~~~~~~Ei~~l~~l 66 (362)
T d1q8ya_ 19 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY--------------------------------TEAAEDEIKLLQRV 66 (362)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCHHH--------------------------------HHHHHHHHHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeccccc--------------------------------hHHHHHHHHHHHHh
Confidence 7899999999999996 48999999998743110 01112222222222
Q ss_pred HHHHHHHHh-hCCCCCeeecEEe-eCCCCceEEEEeccCCCcCCch--hhHhhcCCCHHHHHHHHHHHH--HHHHHH-cC
Q psy12972 488 RNAERCSKD-LAHLPYVYIPRIL-WDKSSTRVLTTEFIDGVKISDK--EGLLEKGFSLADVDRKLFTAF--AEQIFQ-TG 560 (1578)
Q Consensus 488 ~n~~r~~~~-~~~~~~v~vP~v~-~~~~t~~VLVME~i~G~~l~d~--~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G 560 (1578)
.+....... +.+...|.+-... ..-....+++|++..+...... ........+...+...+.+++ +..+|. .|
T Consensus 67 ~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~ 146 (362)
T d1q8ya_ 67 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG 146 (362)
T ss_dssp HHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cchhhhhhhhcCcCceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC
Confidence 221111100 0011111111111 1112334567777654443222 112234455555555555554 667786 99
Q ss_pred ccccCCCCCCCCCC---------eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---------WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---------~v~liDfG~~~ 585 (1578)
++|||+||+|||+. .++++|||...
T Consensus 147 IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~ 180 (362)
T d1q8ya_ 147 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC 180 (362)
T ss_dssp EECSCCSGGGEEEEEEETTTTEEEEEECCCTTCE
T ss_pred cccccCChhHeeeeccCcccccceeeEeeccccc
Confidence 99999999999964 37889999753
|
| >d2fy6a1 c.47.1.10 (A:33-175) Peptide methionine sulfoxide reductase MsrA/MsrB, N-terminal domain {Neisseria meningitidis serogroup A [TaxId: 65699]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Peptide methionine sulfoxide reductase MsrA/MsrB, N-terminal domain species: Neisseria meningitidis serogroup A [TaxId: 65699]
Probab=98.60 E-value=4e-08 Score=99.37 Aligned_cols=90 Identities=23% Similarity=0.374 Sum_probs=75.9
Q ss_pred CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc----------------------------cchhhHh
Q psy12972 871 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH----------------------------NEQGLAR 922 (1578)
Q Consensus 871 s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~----------------------------~~~~L~~ 922 (1578)
-++++++|.|||+||++|++..|.+.++.++++..++.+..|..+ .+..+++
T Consensus 21 ~~gk~vvl~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 100 (143)
T d2fy6a1 21 KKDKPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITVASPGFLHEKKDGDFQKWYAGLNYPKLPVVTDNGGTIAQ 100 (143)
T ss_dssp CTTSCEEEEEECTTCHHHHTTHHHHHHHHHCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEECTTCHHHH
T ss_pred hCCCEEEEEEECCCCccccccCcchhhhhhhhccCCcEEEEEeeeecccccchhhhhhhhhhcCCcccccccccchHHHH
Confidence 347899999999999999999999999999988767777766642 1336789
Q ss_pred HcCccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhh
Q psy12972 923 RLGVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 923 k~gV~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
.|++.+ +|+++++ ++|+....+.|..+.+++.+++++.
T Consensus 101 ~~~v~~-~P~~~liD~~G~i~~~~~G~~~~~~~~~~l~~~ 139 (143)
T d2fy6a1 101 SLNISV-YPSWALIGKDGDVQRIVKGSINEAQALALIRDP 139 (143)
T ss_dssp HTTCCS-SSEEEEECTTSCEEEEEESCCCHHHHHHHHHCT
T ss_pred HcCCCc-cCEEEEECCCCEEEEEEECCCCHHHHHHHHHHH
Confidence 999998 9999998 8898877778999999999998754
|
| >d1f9ma_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea), thioredoxin F [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Spinach (Spinacia oleracea), thioredoxin F [TaxId: 3562]
Probab=98.60 E-value=2.5e-09 Score=104.23 Aligned_cols=79 Identities=15% Similarity=0.260 Sum_probs=55.0
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeec--ccCccccccCCcccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYD--LFGTTDGFSGQDSASRNFH 826 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~--~~~~~~~i~g~~~~~~~~~ 826 (1578)
.++..+|.+.+ ..+++++++|.|||||||||+.+.|.|+++++++.+..+..++|... .+|+..++.+.
T Consensus 10 ~~~~d~f~~~l-~~~~~k~vvv~f~a~wC~~C~~~~p~~~~l~~~~~~v~~~~vd~~~~~~~l~~~~~V~~~-------- 80 (112)
T d1f9ma_ 10 EVNKDTFWPIV-KAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVV-------- 80 (112)
T ss_dssp EECTTTHHHHH-HTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCCSSS--------
T ss_pred EeCHHHHHHHH-HHcCCCEEEEEEEcCCCcchHHHHHHHhhhccccccceeecccccccchhhHhheeeccC--------
Confidence 34555676555 34567899999999999999999999999999998654333333211 14444444444
Q ss_pred ccccCcccccccccc
Q psy12972 827 NHMYNPFDDVFSEGF 841 (1578)
Q Consensus 827 ~i~~~Ptiklf~~~~ 841 (1578)
||+.+|++|-
T Consensus 81 -----Pt~~~~k~G~ 90 (112)
T d1f9ma_ 81 -----PTFKILKENS 90 (112)
T ss_dssp -----SEEEEEETTE
T ss_pred -----CEEEEEECCE
Confidence 9988887653
|
| >d1g7ea_ c.47.1.7 (A:) Endoplasmic reticulum protein ERP29, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: ERP29 N domain-like domain: Endoplasmic reticulum protein ERP29, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.58 E-value=4.8e-09 Score=103.71 Aligned_cols=88 Identities=14% Similarity=0.076 Sum_probs=58.4
Q ss_pred ccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecccCccccccCCcccccccc
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDLFGTTDGFSGQDSASRNFH 826 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~~~~~~~i~g~~~~~~~~~ 826 (1578)
.++|++.||++.+ .+++.+||+||||||+||+. |+|+++|+.+++..-... .. ..++..++.....++.+.-.
T Consensus 6 ~v~L~~~nFd~~i---~~~~~~lV~F~~~wc~~~~~--~~~~~la~~~~~~~~~~~-~~-V~~~~vd~~~n~~l~~~~~~ 78 (122)
T d1g7ea_ 6 ALPLDTVTFYKVI---PKSKFVLVKFDTQYPYGEKQ--DEFKRLAENSASSDDLLV-AE-VGISDYGDKLNMELSEKYKL 78 (122)
T ss_dssp SCSCSHHHHHHHG---GGSSEEEEEEECSSCCTTTT--HHHHHHHHHGGGCSSEEE-EE-EESCCTTSCHHHHHHHHHTC
T ss_pred eEECCHHhHHHHH---hhCCeEEEEEecCCcCcccC--HHHHHHHHHHHHHHHHhh-hc-cceeeccccccHHHHHhhcc
Confidence 4678899999888 45778999999999999975 999999999987621110 00 01223333333333333223
Q ss_pred ccccCcccccccccc
Q psy12972 827 NHMYNPFDDVFSEGF 841 (1578)
Q Consensus 827 ~i~~~Ptiklf~~~~ 841 (1578)
.+..+||+.+|+.|-
T Consensus 79 ~I~~yPTi~~f~~G~ 93 (122)
T d1g7ea_ 79 DKESYPVFYLFRDGD 93 (122)
T ss_dssp SSSSCEEEEEEESSC
T ss_pred cccCCCeEEEEecCc
Confidence 455669999998763
|
| >d1qgva_ c.47.1.8 (A:) spliceosomal protein U5-15Kd {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: spliceosomal protein U5-15Kd domain: spliceosomal protein U5-15Kd species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.55 E-value=8e-09 Score=104.10 Aligned_cols=75 Identities=11% Similarity=0.234 Sum_probs=54.8
Q ss_pred ccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeecc-cCccccccCCcccccccccccc
Q psy12972 753 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYDL-FGTTDGFSGQDSASRNFHNHMY 830 (1578)
Q Consensus 753 ~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~~-~~~~~~i~g~~~~~~~~~~i~~ 830 (1578)
.+|+..+.. +.+++++|+||||||++|+++.|.|+++|+++++. .+..++|.... +++..++.+.
T Consensus 11 ~~~dq~i~~-~~~k~vvv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~VDvd~~~~la~~~~I~~~------------ 77 (137)
T d1qgva_ 11 WQVDQAILS-EEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDP------------ 77 (137)
T ss_dssp HHHHHHHHT-CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSS------------
T ss_pred HHHHHHHHh-CCCCEEEEEEECCCCccchhcChHHHHHHHHhhccceEEEeeccccchhhhhcCeeeE------------
Confidence 356666653 56889999999999999999999999999999864 33333332221 5555555554
Q ss_pred Ccccccccccc
Q psy12972 831 NPFDDVFSEGF 841 (1578)
Q Consensus 831 ~Ptiklf~~~~ 841 (1578)
||+.+|.+|-
T Consensus 78 -PT~~~f~~g~ 87 (137)
T d1qgva_ 78 -CTVMFFFRNK 87 (137)
T ss_dssp -CEEEEEETTE
T ss_pred -EEEEEEeCCc
Confidence 9999988764
|
| >d1fo5a_ c.47.1.1 (A:) MJ0307, thioredoxin/glutaredoxin-like protein {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: MJ0307, thioredoxin/glutaredoxin-like protein species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.53 E-value=1.9e-08 Score=92.58 Aligned_cols=62 Identities=16% Similarity=0.233 Sum_probs=43.3
Q ss_pred ccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeecc-cCccccccCCccccccccccccCccccccccc
Q psy12972 766 TPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYDL-FGTTDGFSGQDSASRNFHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 766 ~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~~-~~~~~~i~g~~~~~~~~~~i~~~Ptiklf~~~ 840 (1578)
++.++.||||||+||+++.|.|+++++.+.+. ....+++..+. +++.+++.+ .||+.+++++
T Consensus 3 kv~v~~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~la~~~~V~~-------------~Pt~~i~~~g 66 (85)
T d1fo5a_ 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMA-------------VPTIVINGDV 66 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCC-------------SSEEEETTEE
T ss_pred ceEEEEEECCCCcChHhhhhhccccccccccccccccccccccccccccCCceE-------------eeEEEEECCc
Confidence 56688999999999999999999999998765 33333332221 445444444 4888776654
|
| >d2ifqa1 c.47.1.1 (A:1-105) Thioredoxin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.48 E-value=4.7e-09 Score=100.94 Aligned_cols=72 Identities=21% Similarity=0.388 Sum_probs=50.5
Q ss_pred cccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCcccccccccccc
Q psy12972 754 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNFHNHMY 830 (1578)
Q Consensus 754 nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i~~ 830 (1578)
+|++.+ ..+++++++|+||||||++|+.+.|.++++++.+.+.. ++.++.+. .+...++ ..
T Consensus 10 ~f~~~l-~~~~~k~vvv~F~a~wC~~C~~~~p~~~~l~~~~~~~~--~~~vd~d~~~~~~~~~~V-------------~~ 73 (105)
T d2ifqa1 10 AFQEAL-DAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVI--FLEVDVDDCQDVASECEV-------------KC 73 (105)
T ss_dssp HHHHHH-HHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSE--EEEEETTTCHHHHHHTTC-------------CB
T ss_pred HHHHHH-HhCCCCEEEEEEEcCCccchhhhhhhhhhhccccccce--eeecccccCHhHHHHcCc-------------eE
Confidence 454444 33457899999999999999999999999999987653 33333332 3333333 44
Q ss_pred Ccccccccccc
Q psy12972 831 NPFDDVFSEGF 841 (1578)
Q Consensus 831 ~Ptiklf~~~~ 841 (1578)
.||+.+|.+|-
T Consensus 74 ~Pt~~~~~~G~ 84 (105)
T d2ifqa1 74 MPTFQFFKKGQ 84 (105)
T ss_dssp SSEEEEEETTE
T ss_pred EEEEEEEECCE
Confidence 49998887654
|
| >d1syra_ c.47.1.1 (A:) Thioredoxin {Malarial parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Malarial parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.47 E-value=5e-09 Score=100.35 Aligned_cols=74 Identities=15% Similarity=0.324 Sum_probs=51.3
Q ss_pred cccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc-cCccccccCCcccccccccccc
Q psy12972 752 HWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL-FGTTDGFSGQDSASRNFHNHMY 830 (1578)
Q Consensus 752 ~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~-~~~~~~i~g~~~~~~~~~~i~~ 830 (1578)
..+|++.+ .++++++|.||||||++|+.+.|.|+++++++.+..+..+++.... +|...++. .
T Consensus 8 ~~~f~~~i---~~~~~vvv~F~a~wC~~C~~~~~~~~~l~~~~~~~~~~~vd~d~~~~~~~~~~V~-------------~ 71 (103)
T d1syra_ 8 QAEFDSII---SQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVSEVTEKENIT-------------S 71 (103)
T ss_dssp HHHHHHHH---HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTTHHHHHHTTCC-------------S
T ss_pred HHHHHHHH---hCCCcEEEEEeCCcccCcccccccchhhhhcccceEEEeeccccCcceeeeeeee-------------c
Confidence 34566555 3568999999999999999999999999999876543333322111 34444444 4
Q ss_pred Ccccccccccc
Q psy12972 831 NPFDDVFSEGF 841 (1578)
Q Consensus 831 ~Ptiklf~~~~ 841 (1578)
.||+.+|.+|-
T Consensus 72 ~Pt~i~~k~G~ 82 (103)
T d1syra_ 72 MPTFKVYKNGS 82 (103)
T ss_dssp SSEEEEEETTE
T ss_pred ceEEEEEECCE
Confidence 49998888664
|
| >d1ti3a_ c.47.1.1 (A:) Thioredoxin {European aspen (Populus tremula), thioredoxin H [TaxId: 113636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: European aspen (Populus tremula), thioredoxin H [TaxId: 113636]
Probab=98.47 E-value=7.7e-09 Score=100.77 Aligned_cols=64 Identities=20% Similarity=0.367 Sum_probs=47.4
Q ss_pred ccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccccccccCcccccccc
Q psy12972 763 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNFHNHMYNPFDDVFSE 839 (1578)
Q Consensus 763 ~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i~~~Ptiklf~~ 839 (1578)
+++++++|.||||||++|+.+.|.|+++++.+.+.. ++.++.+. +|...++ ...||+.+|.+
T Consensus 24 ~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~~~--~~~vd~d~~~~l~~~~~I-------------~~~Pt~~~~k~ 88 (113)
T d1ti3a_ 24 GSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPNVT--FLKVDVDELKAVAEEWNV-------------EAMPTFIFLKD 88 (113)
T ss_dssp TSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCSSEE--EEEEETTTCHHHHHHHHC-------------SSTTEEEEEET
T ss_pred cCCCEEEEEEEcCccccchhhhhhhhhhhccCCCce--EEeeeeeccccccccCee-------------cccceEEEEEC
Confidence 467899999999999999999999999999987554 33333332 4444444 44499988876
Q ss_pred cc
Q psy12972 840 GF 841 (1578)
Q Consensus 840 ~~ 841 (1578)
|-
T Consensus 89 G~ 90 (113)
T d1ti3a_ 89 GK 90 (113)
T ss_dssp TE
T ss_pred CE
Confidence 63
|
| >d1ep7a_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Chlamydomonas reinhardtii [TaxId: 3055]
Probab=98.45 E-value=1.5e-08 Score=98.64 Aligned_cols=75 Identities=21% Similarity=0.458 Sum_probs=52.9
Q ss_pred ccccccccCC-ccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCcccccccccc
Q psy12972 753 WNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNFHNH 828 (1578)
Q Consensus 753 ~nf~~~v~~~-~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i 828 (1578)
.+|+..+... .++++++|.||||||++|+.+.|.|+++++++.+. +.++.++++. +|...++
T Consensus 11 ~~fd~~l~~~~~~~k~vvv~f~a~wC~~C~~~~p~~~~l~~~~~~~-v~~~~vd~d~~~~l~~~~~v------------- 76 (112)
T d1ep7a_ 11 AAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGK-VIFLKVDVDAVAAVAEAAGI------------- 76 (112)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTTTHHHHHHHTC-------------
T ss_pred HHHHHHHHHHhhcCCeEEEEEEcCCcCCCcccchhhhhhhhcccce-EEEEEeeccccccccccccc-------------
Confidence 4566665432 35789999999999999999999999999999863 4444444432 3334344
Q ss_pred ccCcccccccccc
Q psy12972 829 MYNPFDDVFSEGF 841 (1578)
Q Consensus 829 ~~~Ptiklf~~~~ 841 (1578)
...||+.+|..|-
T Consensus 77 ~~~Pt~~~~~~G~ 89 (112)
T d1ep7a_ 77 TAMPTFHVYKDGV 89 (112)
T ss_dssp CBSSEEEEEETTE
T ss_pred cCCCEEEEEECCE
Confidence 4449988887653
|
| >d1xfla_ c.47.1.1 (A:) Thioredoxin {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.42 E-value=1.3e-08 Score=99.33 Aligned_cols=72 Identities=21% Similarity=0.379 Sum_probs=50.6
Q ss_pred cccccccC-CccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccccccc
Q psy12972 754 NFEKNYIP-KSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNFHNHM 829 (1578)
Q Consensus 754 nf~~~v~~-~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i~ 829 (1578)
+|++.+.. .+++++++|.||||||++|+++.|.|+++++.+.+. .++.++.+. +|...++.+
T Consensus 16 ~~~~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~--~~~~vd~~~~~~l~~~~~V~~------------ 81 (114)
T d1xfla_ 16 TWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNV--LFLKVDTDELKSVASDWAIQA------------ 81 (114)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCSSE--EEEEEETTTSHHHHHHTTCCS------------
T ss_pred HHHHHHHHhhccCCeEEEEEEcCCCCCccccccchhhhccccccc--ceeEEEeeeceeeccccceee------------
Confidence 45544432 245789999999999999999999999999998754 344444333 444444444
Q ss_pred cCccccccccc
Q psy12972 830 YNPFDDVFSEG 840 (1578)
Q Consensus 830 ~~Ptiklf~~~ 840 (1578)
.||+.+|.+|
T Consensus 82 -~Pt~~~~~~G 91 (114)
T d1xfla_ 82 -MPTFMFLKEG 91 (114)
T ss_dssp -SSEEEEEETT
T ss_pred -eEEEEEEECC
Confidence 4998888755
|
| >d1xwaa_ c.47.1.1 (A:) Thioredoxin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.42 E-value=1.7e-08 Score=97.96 Aligned_cols=73 Identities=15% Similarity=0.297 Sum_probs=50.6
Q ss_pred cccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCcccccccccccc
Q psy12972 754 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNFHNHMY 830 (1578)
Q Consensus 754 nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i~~ 830 (1578)
+|+..+.. .++++++|.||||||++|+++.|.|+++++++++. +.++.++.+. +++..++ ..
T Consensus 15 ~~~~~l~~-~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~-~~~~~i~~d~~~~l~~~~~V-------------~~ 79 (111)
T d1xwaa_ 15 DLDGQLTK-ASGKLVVLDFFATWCGPCKMISPKLVELSTQFADN-VVVLKVDVDECEDIAMEYNI-------------SS 79 (111)
T ss_dssp HHHHHHHH-HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTTCHHHHHHTTC-------------CS
T ss_pred HHHHHHHh-cCCCEEEEEEECCcccCccccchhHHHHhhhcccc-eEEEEEEeecCcchhhcCCC-------------cc
Confidence 55555533 45789999999999999999999999999999864 2222332222 3344444 44
Q ss_pred Ccccccccccc
Q psy12972 831 NPFDDVFSEGF 841 (1578)
Q Consensus 831 ~Ptiklf~~~~ 841 (1578)
.||+.+|.+|-
T Consensus 80 ~Pt~~~~~~G~ 90 (111)
T d1xwaa_ 80 MPTFVFLKNGV 90 (111)
T ss_dssp SSEEEEEETTE
T ss_pred ccEEEEEECCE
Confidence 49988887553
|
| >d1r26a_ c.47.1.1 (A:) Thioredoxin {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin species: Trypanosoma brucei [TaxId: 5691]
Probab=98.39 E-value=2.1e-08 Score=97.64 Aligned_cols=70 Identities=20% Similarity=0.245 Sum_probs=50.6
Q ss_pred cccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCcccccccccccc
Q psy12972 754 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNFHNHMY 830 (1578)
Q Consensus 754 nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i~~ 830 (1578)
+|++.+ +++++++|.|||+||++|+++.|.|+++++++.+.. ++.++.+. ++...++.+.
T Consensus 18 ~~~~~~---~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~--~~~vd~d~~~~l~~~~~V~~~------------ 80 (113)
T d1r26a_ 18 QFRNIM---SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFPTVK--FAKVDADNNSEIVSKCRVLQL------------ 80 (113)
T ss_dssp HHHHHH---HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCTTSE--EEEEETTTCHHHHHHTTCCSS------------
T ss_pred HHHHHH---cCCCeEEEEEECCCCccchhhceecccccccccccc--ccccccccchhhHHHccccCC------------
Confidence 455544 357889999999999999999999999999987544 44443333 4444444444
Q ss_pred Ccccccccccc
Q psy12972 831 NPFDDVFSEGF 841 (1578)
Q Consensus 831 ~Ptiklf~~~~ 841 (1578)
||+.+|..|-
T Consensus 81 -Pt~~~~~~G~ 90 (113)
T d1r26a_ 81 -PTFIIARSGK 90 (113)
T ss_dssp -SEEEEEETTE
T ss_pred -CEEEEEECCE
Confidence 9988887653
|
| >d1gh2a_ c.47.1.1 (A:) Thioredoxin-like protein, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin-like protein, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.39 E-value=1.5e-08 Score=97.75 Aligned_cols=73 Identities=16% Similarity=0.295 Sum_probs=51.4
Q ss_pred ccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccccccc
Q psy12972 753 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNFHNHM 829 (1578)
Q Consensus 753 ~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i~ 829 (1578)
.+|+..+. .+++++++|+|||+||++|+++.|.|+++|+++.+ +.++.++.+. ++...++ .
T Consensus 10 ~~f~~~l~-~~~~klvvv~F~a~wC~~Ck~~~p~~~~la~~~~~--~~f~~vd~d~~~~l~~~~~v-------------~ 73 (107)
T d1gh2a_ 10 PDFQPELS-GAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQ--AVFLEVDVHQCQGTAATNNI-------------S 73 (107)
T ss_dssp GGHHHHHH-HTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTSHHHHHHTTC-------------C
T ss_pred HHHHHHHH-hCCCCEEEEEEECCCCCCccccchhhhcccccccc--ccccccccccchhhhhhcCc-------------e
Confidence 35655553 34578899999999999999999999999999875 3444444433 3333333 3
Q ss_pred cCcccccccccc
Q psy12972 830 YNPFDDVFSEGF 841 (1578)
Q Consensus 830 ~~Ptiklf~~~~ 841 (1578)
..||+.+|.+|-
T Consensus 74 ~~Pt~~~~~~G~ 85 (107)
T d1gh2a_ 74 ATPTFQFFRNKV 85 (107)
T ss_dssp SSSEEEEEETTE
T ss_pred eceEEEEEECCE
Confidence 449988887653
|
| >d1z5ye1 c.47.1.10 (E:49-184) Thioredoxin-like protein CcmG (CycY, DsbE) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Thioredoxin-like protein CcmG (CycY, DsbE) species: Escherichia coli [TaxId: 562]
Probab=98.36 E-value=2.2e-07 Score=93.06 Aligned_cols=86 Identities=16% Similarity=0.286 Sum_probs=66.6
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc-----------------------cchhhHhHcCccc
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-----------------------NEQGLARRLGVGS 928 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~-----------------------~~~~L~~k~gV~~ 928 (1578)
..+|++|.|||+||++|++..|.++++++. ++.+..++.+ .+..+++.|+|.+
T Consensus 19 ~Gk~vvl~FwatWC~pC~~e~p~l~~~~~~----~~~vi~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 94 (136)
T d1z5ye1 19 QGKPVLLNVWATWCPTSRAEHQYLNQLSAQ----GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYG 94 (136)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEESSCHHHHHHTCCS
T ss_pred CCCEEEEEEEcCcCCCcCccccchhhhhhh----hhhhcccccccchhhhHHHHHHcCCccceeecccchhHHHhcccCC
Confidence 478999999999999999999999998763 2333333332 2346889999998
Q ss_pred cCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 929 QLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 929 ~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|+.+++ ++|+....+.|..+.+.+.+.|++.+
T Consensus 95 -~P~~~liD~~G~i~~~~~G~~~~~~l~~~i~~ll 128 (136)
T d1z5ye1 95 -APETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLW 128 (136)
T ss_dssp -BSEEEEECTTSCEEEEEESCCCHHHHHHHTHHHH
T ss_pred -cceEEEEcCCCEEEEEEEcCCCHHHHHHHHHHHH
Confidence 9988887 78888877779888888877776543
|
| >d1nhoa_ c.47.1.1 (A:) MTH807, thioredoxin/glutaredoxin-like protein {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: MTH807, thioredoxin/glutaredoxin-like protein species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=98.36 E-value=8.7e-08 Score=88.20 Aligned_cols=50 Identities=16% Similarity=0.169 Sum_probs=34.0
Q ss_pred eeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeecc-cCccccccCC
Q psy12972 769 LILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYDL-FGTTDGFSGQ 818 (1578)
Q Consensus 769 lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~~-~~~~~~i~g~ 818 (1578)
++.||||||+||+++.|.|+++++++.+. .+..+++..+. ++...++.+.
T Consensus 5 v~~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~d~~~~l~~~~~V~~~ 56 (85)
T d1nhoa_ 5 IEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAV 56 (85)
T ss_dssp EEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCS
T ss_pred EEEEECCCCcchHHHHHHHhhhcccccccccccccccccchhhHHhcCceEe
Confidence 45599999999999999999999999764 33333332221 4444444443
|
| >d2djka1 c.47.1.2 (A:1-133) Protein disulfide isomerase, PDI {Fungi (Humicola insolens) [TaxId: 34413]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: PDI-like domain: Protein disulfide isomerase, PDI species: Fungi (Humicola insolens) [TaxId: 34413]
Probab=98.35 E-value=4.2e-07 Score=90.83 Aligned_cols=125 Identities=15% Similarity=0.097 Sum_probs=93.7
Q ss_pred CCCCCcccCchhhhhhcCCCCceEEEEEecCCcchHHHHHHHHHHHhhccCCCCcEEEEEEecCcchHHHHhccCCCCCC
Q psy12972 1074 PYLTLPRISSQSMLDAVCPVKKLCVVLFSEDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSS 1153 (1578)
Q Consensus 1074 k~p~vpeLts~~~~~~~c~~~~lcVll~~~~~~~~~~~~~~lr~vA~~~~~~~~~v~F~~vd~~~q~~~~~~f~~~~~~~ 1153 (1578)
..|+++++|..++...... +..+++++.+.+.+.++....++++|++ |+++ +.|+|+|++.....++.|....
T Consensus 4 ~lPLv~e~~~~n~~~~~~~-~~pl~~lf~~~~~~~~~~~~~~~~vA~~--~~~k-i~Fv~vd~~~~~~~l~~~gl~~--- 76 (133)
T d2djka1 4 GSPLIGEIGPETYSDYMSA-GIPLAYIFAETAEERKELSDKLKPIAEA--QRGV-INFGTIDAKAFGAHAGNLNLKT--- 76 (133)
T ss_dssp SCCCSEECCHHHHHHHHHT-TSCEEEEECSCSSSHHHHHHHHHHHHHS--STTT-SEEEEECTTTTGGGTTTTTCCS---
T ss_pred CCCceeccChhhHHHHhcC-CCCEEEEEeCCchHHHHHHHHHHHHHHH--hcCc-eEEEEEeHHHhHHHHHHhcCCc---
Confidence 4689999998887776642 3345566666667788999999999999 9887 9999999988777777763222
Q ss_pred ccccceeEEEEEcCCc-ceEeeccCCcccccccccccHHHHHHHhhhhhcCCcccccccccccccccchhhh
Q psy12972 1154 EISLHIAAMWRMDYKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTALKEISDEYIQS 1224 (1578)
Q Consensus 1154 ~~~~~lp~l~~~n~~~-~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~~~l~~~~~lp~l~dE~~~~ 1224 (1578)
.++|.+++.+... .+|....+ ...|.++|..|++.++.|... |.+.+|-.|.
T Consensus 77 ---~~~P~~~i~~~~~~~~~~~~~~--------~~i~~~~i~~Fi~d~~~Gkl~--------p~~kSe~iPe 129 (133)
T d2djka1 77 ---DKFPAFAIQEVAKNQKFPFDQE--------KEITFEAIKAFVDDFVAGKIE--------PSIKSEPIPE 129 (133)
T ss_dssp ---SSSSEEEEECTTTCCBCCCCSS--------SCCCHHHHHHHHHHHHHTCCC--------CSSCCCCCCT
T ss_pred ---ccCCcEEEEEcCCCceecCCcc--------ccCCHHHHHHHHHHHHcCCCC--------cccccCCCCC
Confidence 5678888887665 55554443 346889999999999999987 5555555553
|
| >d2es7a1 c.47.1.20 (A:7-125) Hydrogenase-1 operon protein HyaE {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: HyaE-like domain: Hydrogenase-1 operon protein HyaE species: Salmonella typhimurium [TaxId: 90371]
Probab=98.35 E-value=6.8e-08 Score=94.86 Aligned_cols=77 Identities=10% Similarity=0.038 Sum_probs=48.3
Q ss_pred ccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccccc
Q psy12972 751 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNFHN 827 (1578)
Q Consensus 751 ~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~ 827 (1578)
++.+|+.-+ ....++++++.|||+||++|++++|.|+++++++.+..+.++.++.+. +|+..++++.
T Consensus 17 ~~~~ld~~~-~~~~~~~vll~f~a~wCp~C~~~~pvl~eL~~~~~~~~~~~~~Vd~d~~~~l~~~~~V~~~--------- 86 (119)
T d2es7a1 17 EASTVDDWI-KRVGDGVILLSSDPRRTPEVSDNPVMIAELLREFPQFDWQVAVADLEQSEAIGDRFNVRRF--------- 86 (119)
T ss_dssp CCC---------CCSEEEEECCCSCC----CCHHHHHHHHHHTCTTSCCEEEEECHHHHHHHHHTTTCCSS---------
T ss_pred cccCHHHHH-HhCCCcEEEEeecCCCCccHHHHHHHHHHHHHhcCCCceEEEEEECCCCHHHHHhcCcCcc---------
Confidence 444555444 345678999999999999999999999999999988665444343332 5666666555
Q ss_pred cccCcccccccccc
Q psy12972 828 HMYNPFDDVFSEGF 841 (1578)
Q Consensus 828 i~~~Ptiklf~~~~ 841 (1578)
||+.+|.+|.
T Consensus 87 ----Pt~~~~~~G~ 96 (119)
T d2es7a1 87 ----PATLVFTDGK 96 (119)
T ss_dssp ----SEEEEESCC-
T ss_pred ----eEEEEEEcCe
Confidence 8988887654
|
| >d1zzoa1 c.47.1.10 (A:45-178) Lipoprotein DsbF {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Lipoprotein DsbF species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.33 E-value=5.6e-07 Score=89.66 Aligned_cols=85 Identities=16% Similarity=0.350 Sum_probs=68.4
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc-----------------------cchhhHhHcCcccc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-----------------------NEQGLARRLGVGSQ 929 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~-----------------------~~~~L~~k~gV~~~ 929 (1578)
.++++|.||++||++|++..|.+.++++.+++. .+..|+.. .+..+.+.||+.+
T Consensus 25 Gk~vll~fwa~wC~~C~~~~p~l~~l~~~~~~~--~~v~v~~~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~- 101 (134)
T d1zzoa1 25 GKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEV--TFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQ- 101 (134)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTS--EEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCS-
T ss_pred CCEEEEEecccccCcccccchhhHHHHhhhccc--ccccccccccchhHHHHHHhcCCcceeEEeeccchHHHhcCCCc-
Confidence 689999999999999999999999999998764 44444432 2337889999997
Q ss_pred CCcEEEE-cCCccccccCCCCCHHHHHHHHHhh
Q psy12972 930 LPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 930 ~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
+|+.+++ ++|+. .+..|..+.++|.+.|++.
T Consensus 102 ~P~~~iiD~~G~i-~~~~g~~~~~~l~~~i~~L 133 (134)
T d1zzoa1 102 QPAYAFVDPHGNV-DVVRGRMSQDELTRRVTAL 133 (134)
T ss_dssp SSEEEEECTTCCE-EEEESCCCHHHHHHHHHHH
T ss_pred cCeEEEECCCCeE-EEEECCCCHHHHHHHHHhh
Confidence 9999998 56765 4456888999999888754
|
| >d1sena_ c.47.1.1 (A:) Thioredoxin-like protein p19, TLP19 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin-like protein p19, TLP19 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.31 E-value=1.8e-07 Score=93.60 Aligned_cols=77 Identities=17% Similarity=0.276 Sum_probs=56.8
Q ss_pred CCCCcEEEEEEcCCCcccccccHHHHHHHHHhC-CCceEEEEEECccchhhHhHcCccccCCcEEEE-cCCccccccCC
Q psy12972 871 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELS-PLGVGFFTVHVHNEQGLARRLGVGSQLPQIALL-TDGRTSFFKEP 947 (1578)
Q Consensus 871 s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~-~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf-~~G~~~~y~~G 947 (1578)
..++|++|.|||+||++|+.+.|.+.+..+..+ ...+..+.||++.+..++..+...+.+||++++ ++|+......|
T Consensus 23 ~~~Kpvlv~F~a~wC~~C~~~~~~~~~~~~~~~~~~~fv~v~vd~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~g 101 (135)
T d1sena_ 23 ASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKVHPEIIN 101 (135)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCBCTTCCC
T ss_pred HcCCcEEEEEEecCCCCceecchhhhhhHHHHHhcCCcEEEeCCCCcCHHHHHHHhhcccceeEEEECCCCeEEEEecC
Confidence 458999999999999999999999876654322 123888899999888877654333238999998 56776543333
|
| >d1st9a_ c.47.1.10 (A:) Thiol-disulfide oxidoreductase ResA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Thiol-disulfide oxidoreductase ResA species: Bacillus subtilis [TaxId: 1423]
Probab=98.29 E-value=6.5e-07 Score=89.57 Aligned_cols=86 Identities=16% Similarity=0.397 Sum_probs=72.1
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc----------------------chhhHhHcCccccC
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------EQGLARRLGVGSQL 930 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~----------------------~~~L~~k~gV~~~~ 930 (1578)
.++++|.||++||++|++..|.+.++.+.+.+.++.+..|+++. +..+++.|++.+ +
T Consensus 25 gk~~li~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-~ 103 (137)
T d1st9a_ 25 GKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSP-L 103 (137)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHTTCCSCEEEETTSHHHHHTTCCS-S
T ss_pred CCEEEEEEeeccccceeecccccccccccccccccccccccccchhhhHHHHHHHcCCCccccccccchhhhhhhccc-c
Confidence 57899999999999999999999999999987778888887643 236888999997 9
Q ss_pred CcEEEE-cCCccccccCCCCCHHHHHHHHH
Q psy12972 931 PQIALL-TDGRTSFFKEPSFSVQKMVEFFR 959 (1578)
Q Consensus 931 PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~ 959 (1578)
|+++++ ++|+.+..+.|..+.+.+.++++
T Consensus 104 P~~~liD~~G~i~~~~~G~~~~~~~~~~l~ 133 (137)
T d1st9a_ 104 PTTFLINPEGKVVKVVTGTMTESMIHDYMN 133 (137)
T ss_dssp CEEEEECTTSEEEEEEESCCCHHHHHHHHH
T ss_pred ceEEEECCCCEEEEEEECCCCHHHHHHHHH
Confidence 998888 77887776778888888877764
|
| >d1lu4a_ c.47.1.10 (A:) Soluble secreted antigen MPT53 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Soluble secreted antigen MPT53 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.28 E-value=1.1e-06 Score=87.79 Aligned_cols=85 Identities=16% Similarity=0.337 Sum_probs=67.8
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc----------------------chhhHhHcCccccC
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------EQGLARRLGVGSQL 930 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~----------------------~~~L~~k~gV~~~~ 930 (1578)
.++++|.||++||++|+...|.+++++.+.++ +.+..|+.+. +..+++.|+|.+ +
T Consensus 24 Gk~vll~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~v~v~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~v~~-~ 100 (134)
T d1lu4a_ 24 GKPAVLWFWTPWCPFCNAEAPSLSQVAAANPA--VTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPW-Q 100 (134)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCS-S
T ss_pred CCEEEEEEeecccCCceecchhHHHHhhhhcc--ccccccccccchhhhhhhhhhhccccceeeCchHHHHHHcCCCc-C
Confidence 67999999999999999999999999988764 6777776542 346889999997 9
Q ss_pred CcEEEE-cCCccc--cccCCCCCHHHHHHHHHh
Q psy12972 931 PQIALL-TDGRTS--FFKEPSFSVQKMVEFFRL 960 (1578)
Q Consensus 931 PTl~lf-~~G~~~--~y~~G~~s~~~L~~fi~~ 960 (1578)
|+++++ ++|+.. ....|..+.++|.+-|..
T Consensus 101 P~~~lid~~G~i~~v~~~~g~~~~~~l~~~l~~ 133 (134)
T d1lu4a_ 101 PAFVFYRADGTSTFVNNPTAAMSQDELSGRVAA 133 (134)
T ss_dssp SEEEEECTTSCEEEECCSSSCCCHHHHHHHHHH
T ss_pred CEEEEEeCCCeEEEEeccCCCCCHHHHHHHHHc
Confidence 999998 567643 233477888888887754
|
| >d2hfda1 c.47.1.20 (A:1-132) Hydrogenase-1 operon protein HyaE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: HyaE-like domain: Hydrogenase-1 operon protein HyaE species: Escherichia coli [TaxId: 562]
Probab=98.27 E-value=4.9e-08 Score=97.63 Aligned_cols=77 Identities=12% Similarity=0.052 Sum_probs=55.7
Q ss_pred ccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccccc
Q psy12972 751 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNFHN 827 (1578)
Q Consensus 751 ~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~ 827 (1578)
+..+|+..+. ...++++|+.|||+||++|++++|.++++++++.+..+-++.++.+. +|+.+++.+.
T Consensus 23 ~~~~~d~~~~-~~~~~vVll~f~a~wCp~C~~~~pvl~ela~~~~~~~~~~a~Vd~d~~~~la~~~~V~~~--------- 92 (132)
T d2hfda1 23 SESRLDDWLT-QAPDGVVLLSSDPKRTPEVSDNPVMIGELLREFPDYTWQVAIADLEQSEAIGDRFGVFRF--------- 92 (132)
T ss_dssp CHHHHHHHHH-HCSEEEEEECSCCSCCSSSSCCTHHHHHHHTTCTTSCEEEEEECHHHHHHHHHHHTCCSC---------
T ss_pred ccccHHHHHH-hCCCcEEEEEeeCCCChhHHHHHHHHHHHHHHccCCcceeEEEEecCCHHHHHhhccCcc---------
Confidence 3446665443 34568899999999999999999999999999988754333333332 6666666655
Q ss_pred cccCcccccccccc
Q psy12972 828 HMYNPFDDVFSEGF 841 (1578)
Q Consensus 828 i~~~Ptiklf~~~~ 841 (1578)
||+.+|.+|-
T Consensus 93 ----PT~~~~~~G~ 102 (132)
T d2hfda1 93 ----PATLVFTGGN 102 (132)
T ss_dssp ----CEEEEEETTE
T ss_pred ----eeEEEEEcCc
Confidence 8988887653
|
| >d2b5xa1 c.47.1.10 (A:1-143) thiol:disulfide oxidoreductase YkuV {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: thiol:disulfide oxidoreductase YkuV species: Bacillus subtilis [TaxId: 1423]
Probab=98.27 E-value=8.5e-07 Score=89.48 Aligned_cols=87 Identities=17% Similarity=0.327 Sum_probs=70.9
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc---------------------------chhhHhHc
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN---------------------------EQGLARRL 924 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~---------------------------~~~L~~k~ 924 (1578)
.+++++|.||++||++|++..|.+.++.+.+++. +.+..|+.+. +..+++.|
T Consensus 28 ~~k~vvl~f~a~~C~~C~~~~p~l~~l~~~~~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~D~~~~~~~~~ 106 (143)
T d2b5xa1 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAF 106 (143)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHT
T ss_pred CCCEEEEEEEcCCCcchhhhhhhhhhhhhhhhcc-ccceeEEeeccccccchhhhhhHHHhhccCccccccCccchHHHc
Confidence 4689999999999999999999999999999864 7777776521 22578889
Q ss_pred CccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHh
Q psy12972 925 GVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRL 960 (1578)
Q Consensus 925 gV~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~ 960 (1578)
++.+ +|+++++ ++|+....+.|..+.+.+.+-+++
T Consensus 107 ~v~~-~P~~~~id~~G~i~~~~~G~~~~~~l~~~l~~ 142 (143)
T d2b5xa1 107 ENEY-VPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNR 142 (143)
T ss_dssp CCCC-SSEEEEECTTCBEEEEEESCSTTHHHHHHHHH
T ss_pred CCCc-CCEEEEECCCCEEEEEEECCCCHHHHHHHHHh
Confidence 9997 9998888 788877666788888888777654
|
| >d1knga_ c.47.1.10 (A:) Thioredoxin-like protein CcmG (CycY, DsbE) {Bradyrhizobium japonicum [TaxId: 375]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Thioredoxin-like protein CcmG (CycY, DsbE) species: Bradyrhizobium japonicum [TaxId: 375]
Probab=98.26 E-value=4.5e-07 Score=91.62 Aligned_cols=87 Identities=11% Similarity=0.314 Sum_probs=67.2
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEEC-----------------------ccchhhHhHcCccc
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV-----------------------HNEQGLARRLGVGS 928 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc-----------------------~~~~~L~~k~gV~~ 928 (1578)
+.++++|.||++||++|+...|.+.++.+..+ +.+..|.. +.+..+.+.|+|.+
T Consensus 30 kgK~vll~fwa~wC~~C~~~~p~l~~l~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (144)
T d1knga_ 30 KGKVSLVNVWASWCVPCHDEAPLLTELGKDKR---FQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYG 106 (144)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTCTT---SEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCS
T ss_pred CCCEEEEEeeccccccccccCchhhhhhhccC---ceeEEEEeeechHHHHHHHHHcCCccccccccccchhhhhcCccc
Confidence 36899999999999999999999998876653 23332221 22447899999998
Q ss_pred cCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 929 QLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 929 ~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|+.+++ ++|+......|..+.+++.+.+.+.+
T Consensus 107 -~P~~~liD~~G~i~~~~~G~~~~~~l~~~i~~~l 140 (144)
T d1knga_ 107 -VPETFVVGREGTIVYKLVGPITPDNLRSVLLPQM 140 (144)
T ss_dssp -SCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHH
T ss_pred -cceEEEEcCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 9998888 68888776779999898888776543
|
| >d1a8la2 c.47.1.2 (A:120-226) Protein disulfide isomerase, PDI {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: PDI-like domain: Protein disulfide isomerase, PDI species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.18 E-value=1.8e-07 Score=89.60 Aligned_cols=63 Identities=13% Similarity=0.009 Sum_probs=41.4
Q ss_pred CccceeccccccccccccchHHHHHHHHHhcC---CCcceeeeeecc---cCccccccCCccccccccccccCccccccc
Q psy12972 765 TTPHLILFYSDWCFACLQVEPIFKKLMDELSP---LGVGFFTVHYDL---FGTTDGFSGQDSASRNFHNHMYNPFDDVFS 838 (1578)
Q Consensus 765 ~~~~lV~FYApwCghCk~LaP~weklA~~Lk~---~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i~~~Ptiklf~ 838 (1578)
++++++.|||||||||+++.|.|+++|.+... ..+.+..++.+. +|..+++. ..||+.++.
T Consensus 15 ~~v~i~~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~v~~~~id~~~~~~l~~~~~V~-------------~vPTi~i~~ 81 (107)
T d1a8la2 15 QDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVM-------------AVPKIVIQV 81 (107)
T ss_dssp SCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCC-------------SSCEEEEEE
T ss_pred CCeEEEEEEcCccccchhhChhHHhhhhhhhhccCCcEEEEEeccccccccccccccc-------------cceEEEEEe
Confidence 34456679999999999999999999976432 234343333322 34444444 448887776
Q ss_pred cc
Q psy12972 839 EG 840 (1578)
Q Consensus 839 ~~ 840 (1578)
+|
T Consensus 82 ~G 83 (107)
T d1a8la2 82 NG 83 (107)
T ss_dssp TT
T ss_pred CC
Confidence 55
|
| >d1wjka_ c.47.1.1 (A:) Thioredoxin-like structure containing protein C330018D20Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin-like structure containing protein C330018D20Rik species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.18 E-value=4.1e-07 Score=86.34 Aligned_cols=86 Identities=15% Similarity=0.225 Sum_probs=70.6
Q ss_pred cCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCC
Q psy12972 870 KSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSF 949 (1578)
Q Consensus 870 ~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~ 949 (1578)
.+..-|.++.|+++||+.|+.+.|.+++++..+. ..+..+|.+.++++.++|+++ .|+|++ +|+... .|..
T Consensus 12 ~~~~~p~i~lft~~~C~~C~~a~~~L~~~~~~~~---~~~v~vd~~~~~~l~~~y~~~--VPvl~i--dg~~~~--~g~~ 82 (100)
T d1wjka_ 12 SNRALPVLTLFTKAPCPLCDEAKEVLQPYKDRFI---LQEVDITLPENSTWYERYKFD--IPVFHL--NGQFLM--MHRV 82 (100)
T ss_dssp SCCCCCEEEEEECSSCHHHHHHHHHTSTTSSSSE---EEEEETTSSTTHHHHHHSSSS--CSEEEE--SSSEEE--ESSC
T ss_pred cCCCCCEEEEEECCCCCChHHHHHHHHHhhhhcc---eEEEecccccCHHHHHHhccc--CCceee--cCceEE--eCCC
Confidence 3557789999999999999999999988876664 678889999999999999984 897653 777653 2778
Q ss_pred CHHHHHHHHHhhCCC
Q psy12972 950 SVQKMVEFFRLKLPY 964 (1578)
Q Consensus 950 s~~~L~~fi~~~lp~ 964 (1578)
+.+.|.+++++...+
T Consensus 83 d~~~L~~~L~~l~~~ 97 (100)
T d1wjka_ 83 NTSKLEKQLRKLSGP 97 (100)
T ss_dssp CHHHHHHHHHSSSCS
T ss_pred CHHHHHHHHHHHhcC
Confidence 999999999876544
|
| >d1bjxa_ c.47.1.2 (A:) Protein disulfide isomerase, PDI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: PDI-like domain: Protein disulfide isomerase, PDI species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.16 E-value=2.6e-06 Score=82.08 Aligned_cols=107 Identities=14% Similarity=0.249 Sum_probs=87.5
Q ss_pred ccccccccHHHHhhcccCCCcEEEEEeccCCchHHHHHHHHhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEec
Q psy12972 967 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFK 1046 (1578)
Q Consensus 967 v~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk 1046 (1578)
..+.+.++++.|++.. +.++|+||.+..+.....+..++...+.+.|+++ .+.++++.++++. |+|++||
T Consensus 3 ~~l~~~~~~e~f~~~~---~v~VVGfF~~~~~~~~~~F~~~A~~~~d~~F~~t-----~~~~v~~~~~v~~--~~Ivl~k 72 (110)
T d1bjxa_ 3 TTLPDGAAAESLVESS---EVAVIGFFKDVESDSAKQFLQAAEAIDDIPFGIT-----SNSDVFSKYQLDK--DGVVLFK 72 (110)
T ss_dssp EECCSHHHHHHHHHHS---SEEEEEECTTTTSHHHHHHHHHHHHCSSSCEEEE-----CCSHHHHHTTCSS--CEEEEEE
T ss_pred eEcCCHHHHHHHhccC---CeEEEEEEcCCCchHHHHHHHHHHhCcCceEEEE-----CCHHHHHHcCCCC--CeEEEec
Confidence 3455678899999886 8899999988888888888888866677999999 7889999999964 8999998
Q ss_pred cCCCCCccccccCCCCchhhhhhhhcCCCCCCcccCchh
Q psy12972 1047 EDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQS 1085 (1578)
Q Consensus 1047 ~~~~~~~~~l~~~~l~~~~L~~fI~~nk~p~vpeLts~~ 1085 (1578)
...+.... ..++++...|..||..|++|++.++|..+
T Consensus 73 ~~de~~~~--~~~~~~~~~l~~fi~~~~~PlV~e~~~e~ 109 (110)
T d1bjxa_ 73 KFDEGRNN--FEGEVTKENLLDFIKHNQLPLVIEFTEQT 109 (110)
T ss_dssp SSSSSBCC--CCSCCCHHHHHHHHHHHSSCCCSSCCCTT
T ss_pred cCCccccc--cCCCCCHHHHHHHHHHcCcCcEEecCCCC
Confidence 65443332 25667888999999999999999998765
|
| >d2dlxa1 c.47.1.24 (A:1-147) UBX domain-containing protein 7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: UAS domain domain: UBX domain-containing protein 7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.14 E-value=1.2e-06 Score=89.03 Aligned_cols=89 Identities=16% Similarity=0.158 Sum_probs=66.6
Q ss_pred CCCCcEEEEEEcCCCcccccccHHH---HHHHHHhCCCceEEEEEECccc--hhhHhHcCccccCCcEEEEc--CCcccc
Q psy12972 871 SYTTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVHNE--QGLARRLGVGSQLPQIALLT--DGRTSF 943 (1578)
Q Consensus 871 s~~~~~LV~FyapwCg~Ck~l~p~~---~~lA~~l~~~~v~~a~VDc~~~--~~L~~k~gV~~~~PTl~lf~--~G~~~~ 943 (1578)
+.++++||+|+++||+.|+.+.... .++.+.++.. +.+..||.+.. ..++++|+|.+ +|++.++. .|+.+.
T Consensus 40 ~~~K~llV~~~~~~C~~C~~m~~~v~~d~~V~~~l~~~-fV~~~v~~~~~e~~~~~~~y~v~~-~Pti~~idp~~ge~v~ 117 (147)
T d2dlxa1 40 MQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREH-FIFWQVYHDSEEGQRYIQFYKLGD-FPYVSILDPRTGQKLV 117 (147)
T ss_dssp HHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHT-EEEEEEESSSHHHHHHHHHHTCCS-SSEEEEECTTTCCCCE
T ss_pred HcCCcEEEEEecCCCCchHHHHHhccCCHHHHHHHhhh-eeEeeecccchhhhhhhhheecCc-eeEEEEEeCCCCeEec
Confidence 3579999999999999999886632 3444445433 77888888665 68999999998 99999994 576654
Q ss_pred ccCCCCCHHHHHHHHHhhC
Q psy12972 944 FKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 944 y~~G~~s~~~L~~fi~~~l 962 (1578)
.. |..+++++++.+++.+
T Consensus 118 ~~-~~~~~~~fl~~L~~fl 135 (147)
T d2dlxa1 118 EW-HQLDVSSFLDQVTGFL 135 (147)
T ss_dssp EE-SSCCHHHHHHHHHHHH
T ss_pred cc-CCCCHHHHHHHHHHHH
Confidence 44 5678888766665544
|
| >d1i5ga_ c.47.1.10 (A:) Tryparedoxin II {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Tryparedoxin II species: Crithidia fasciculata [TaxId: 5656]
Probab=98.07 E-value=2.5e-06 Score=86.27 Aligned_cols=69 Identities=14% Similarity=0.282 Sum_probs=56.3
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCC-ceEEEEEECccch------------------------hhHhHcCcc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHVHNEQ------------------------GLARRLGVG 927 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~-~v~~a~VDc~~~~------------------------~L~~k~gV~ 927 (1578)
.++++|.|||+||++|+...|.+.++.+++++. ++.+..|+.+.+. .+++.|+|.
T Consensus 28 GK~vll~FwAtWC~pC~~~~p~L~~l~~~~~~~~~~~vi~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~y~v~ 107 (144)
T d1i5ga_ 28 GKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVK 107 (144)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC
T ss_pred CCEEEEEEEecCCchHhhhhHhHHHHHHHHHhccCcEEEEEeccccHHHHHHHHHhCCCCceeeEChHHHHHHHHHCCCC
Confidence 689999999999999999999999999999754 4778888775322 368889999
Q ss_pred ccCCcEEEEc-C-Cccc
Q psy12972 928 SQLPQIALLT-D-GRTS 942 (1578)
Q Consensus 928 ~~~PTl~lf~-~-G~~~ 942 (1578)
+ +||++++. + |+.+
T Consensus 108 ~-iPt~~lid~~~G~vi 123 (144)
T d1i5ga_ 108 S-IPTLVGVEADSGNII 123 (144)
T ss_dssp S-SSEEEEEETTTCCEE
T ss_pred C-cCEEEEEeCCCCEEE
Confidence 8 99999884 4 5543
|
| >d1woua_ c.47.1.16 (A:) Putative 42-9-9 protein (thioredoxin containing protein Txnl5) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Txnl5-like domain: Putative 42-9-9 protein (thioredoxin containing protein Txnl5) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.07 E-value=1.9e-07 Score=91.64 Aligned_cols=51 Identities=20% Similarity=0.453 Sum_probs=38.0
Q ss_pred cccccccCCccCccceecccc-------ccccccccchHHHHHHHHHhcCCCcceeeeee
Q psy12972 754 NFEKNYIPKSYTTPHLILFYS-------DWCFACLQVEPIFKKLMDELSPLGVGFFTVHY 806 (1578)
Q Consensus 754 nf~~~v~~~~~~~~~lV~FYA-------pwCghCk~LaP~weklA~~Lk~~~vg~v~~~~ 806 (1578)
+|.+.+. ...+++++|.||| ||||||+++.|.|+++++.+++. +.++.+++
T Consensus 11 e~~~~l~-~~~gk~v~v~F~a~~~~~g~sWC~pCk~~~P~~~~l~~~~~~~-~~~~~vdv 68 (119)
T d1woua_ 11 EFHRAVE-QHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEG-CVFIYCQV 68 (119)
T ss_dssp HHHHHHH-TTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTT-EEEEEEEC
T ss_pred HHHHHHH-HcCCCEEEEEEEecCCCCCCCCChhHHHHHHHHHHHHHhcCCc-eEEEEEEC
Confidence 4444443 3456789999999 59999999999999999988754 44444443
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.06 E-value=3.6e-06 Score=92.34 Aligned_cols=80 Identities=15% Similarity=0.075 Sum_probs=57.2
Q ss_pred cCCccccccc-ceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 406 FDENPIAAAS-LAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 406 fd~~PlasaS-iaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
.+-+|++.|. -++||+....+|..++||+.+|+-... +.
T Consensus 13 ~~~~~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~~~----------------------------------------l~ 52 (255)
T d1nd4a_ 13 YDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNE----------------------------------------LQ 52 (255)
T ss_dssp CEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTTSC----------------------------------------HH
T ss_pred CceEEcCCcccCCeEEEEEeCCCCEEEEEeCCccCHhH----------------------------------------HH
Confidence 3446777755 589999999889999999988764322 34
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISD 530 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d 530 (1578)
.|++.++.++. ..+.||+++.. -....+++|||++|.++.+
T Consensus 53 ~E~~~l~~L~~-----~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~ 95 (255)
T d1nd4a_ 53 DEAARLSWLAT-----TGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS 95 (255)
T ss_dssp HHHHHHHHHHT-----TTCCBCCEEEEEECSSCEEEEEECCSSEETTT
T ss_pred HHHHHHHHHHh-----cCCCCCceeeecccccceEEEEEeeecccccc
Confidence 55666655543 24678998852 3346689999999998865
|
| >d1zmaa1 c.47.1.1 (A:1-115) Bacterocin transport accessory protein Bta {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Bacterocin transport accessory protein Bta species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.01 E-value=4.6e-07 Score=88.11 Aligned_cols=35 Identities=9% Similarity=0.119 Sum_probs=31.6
Q ss_pred ccCccceeccccccccccccchHHHHHHHHHhcCC
Q psy12972 763 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL 797 (1578)
Q Consensus 763 ~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~ 797 (1578)
+++++++|.||+|||+||+++.|.|+++++.++..
T Consensus 24 ~~~~~~~v~f~~~~C~~C~~~~p~l~~~~~~~~~~ 58 (115)
T d1zmaa1 24 DKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAH 58 (115)
T ss_dssp HTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCC
T ss_pred hcCCCEEEEEcCCCCccHHHHHHHHHHHHHHhhhh
Confidence 46788999999999999999999999999998654
|
| >d1o73a_ c.47.1.10 (A:) Tryparedoxin I {Trypanosoma brucei brucei [TaxId: 5702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Tryparedoxin I species: Trypanosoma brucei brucei [TaxId: 5702]
Probab=97.99 E-value=4.4e-06 Score=84.27 Aligned_cols=69 Identities=17% Similarity=0.482 Sum_probs=56.0
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhC-CCceEEEEEECccch------------------------hhHhHcCcc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELS-PLGVGFFTVHVHNEQ------------------------GLARRLGVG 927 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~-~~~v~~a~VDc~~~~------------------------~L~~k~gV~ 927 (1578)
.++++|.|||+||++|++..|.+.++.+++. +.++.+..|+.+... .+++.|+|.
T Consensus 28 GK~vvl~FwatwC~~C~~~~p~l~~l~~~~~~~~~~~vi~is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~y~v~ 107 (144)
T d1o73a_ 28 GKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVE 107 (144)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCC
T ss_pred CCEEEEEeChhhCccchhhhHHHHHHHHHHhhccCeEEEEEecchhHHHHHHHHHhccccceeeeccchHHHHHHHcCCC
Confidence 6899999999999999999999999999985 445888888764321 478889999
Q ss_pred ccCCcEEEEc-C-Cccc
Q psy12972 928 SQLPQIALLT-D-GRTS 942 (1578)
Q Consensus 928 ~~~PTl~lf~-~-G~~~ 942 (1578)
+ +||++++. + |+.+
T Consensus 108 ~-~Pt~~lID~~~G~Ii 123 (144)
T d1o73a_ 108 S-IPTLITINADTGAII 123 (144)
T ss_dssp S-SSEEEEEETTTCCEE
T ss_pred c-CCEEEEEECCCCEEE
Confidence 8 99999884 4 5443
|
| >d2fwha1 c.47.1.1 (A:428-544) Thiol:disulfide interchange protein DsbD, C-terminal domain (DsbD-gamma) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thiol:disulfide interchange protein DsbD, C-terminal domain (DsbD-gamma) species: Escherichia coli [TaxId: 562]
Probab=97.97 E-value=6e-07 Score=87.29 Aligned_cols=35 Identities=26% Similarity=0.625 Sum_probs=28.0
Q ss_pred ccCccceeccccccccccccchHHH---HHHHHHhcCC
Q psy12972 763 SYTTPHLILFYSDWCFACLQVEPIF---KKLMDELSPL 797 (1578)
Q Consensus 763 ~~~~~~lV~FYApwCghCk~LaP~w---eklA~~Lk~~ 797 (1578)
..++++||.|||+||++|+++.|.+ .++++.+++.
T Consensus 20 ~~gK~vlv~F~a~wC~~C~~~~~~~~~~~~v~~~~~~~ 57 (117)
T d2fwha1 20 AKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADT 57 (117)
T ss_dssp HTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTTS
T ss_pred cCCCeEEEEEecccCCcccccchhHHhHHHHHHhccce
Confidence 3468999999999999999999998 4555555543
|
| >d1hyua4 c.47.1.2 (A:103-198) Alkyl hydroperoxide reductase subunit F (AhpF), N-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: PDI-like domain: Alkyl hydroperoxide reductase subunit F (AhpF), N-terminal domain species: Salmonella typhimurium [TaxId: 90371]
Probab=97.95 E-value=6.7e-07 Score=84.12 Aligned_cols=54 Identities=13% Similarity=-0.003 Sum_probs=36.8
Q ss_pred CccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc-cCccccccCC
Q psy12972 765 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL-FGTTDGFSGQ 818 (1578)
Q Consensus 765 ~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~-~~~~~~i~g~ 818 (1578)
+...++.|||||||||+++.|.|+++|.......+..+++..+. ++..+++.+.
T Consensus 15 ~~~~i~~F~s~~C~~C~~~~p~~~~~a~~~~~i~~~~vd~~~~~~l~~~~~I~~v 69 (96)
T d1hyua4 15 GDFEFETYYSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQNEITERNVMGV 69 (96)
T ss_dssp SCEEEEEEECTTCSSHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTCCSS
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHhCCceEEEEEecccchHHHhhcccccc
Confidence 34568889999999999999999999987654444444433222 4444555444
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.89 E-value=5.5e-06 Score=95.02 Aligned_cols=25 Identities=12% Similarity=0.073 Sum_probs=22.3
Q ss_pred cceEEEEEEecCCCEEEEEEecchh
Q psy12972 415 SLAQVFRAVTKEGVEVAVKVQYIDL 439 (1578)
Q Consensus 415 SiaQVhrA~l~~G~~VAVKVq~P~i 439 (1578)
.--+||+.++.+|+.|++||.||+-
T Consensus 34 ~EN~vy~v~~~dg~~~VlK~~rp~~ 58 (325)
T d1zyla1 34 YENRVYQFQDEDRRRFVVKFYRPER 58 (325)
T ss_dssp SSSEEEEECCTTCCCEEEEEECTTT
T ss_pred ccceeEEEEcCCCCEEEEEEeCCCC
Confidence 3468999999999999999999984
|
| >d2b5ea3 c.47.1.2 (A:240-364) Protein disulfide isomerase, PDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: PDI-like domain: Protein disulfide isomerase, PDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.75 E-value=2.7e-05 Score=76.53 Aligned_cols=117 Identities=12% Similarity=0.070 Sum_probs=83.2
Q ss_pred cccCchhhhhhcCCCCceEEEEEecCCcchHHHHHHHHHHHhhccCCCCcEEEEEEecCcchHHHHhccCCCCCCccccc
Q psy12972 1079 PRISSQSMLDAVCPVKKLCVVLFSEDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLH 1158 (1578)
Q Consensus 1079 peLts~~~~~~~c~~~~lcVll~~~~~~~~~~~~~~lr~vA~~~~~~~~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~ 1158 (1578)
.++++.++.+... .+..+++++.+.+++.++....++++|++ |+++ +.|+|+|.+.....++.|... .+
T Consensus 3 gei~~~~~~~y~~-~~~Pl~~~f~~~~~~~~~~~~~~~~vAk~--fkgk-i~Fv~~D~~~~~~~l~~fgl~-------e~ 71 (125)
T d2b5ea3 3 GEIDGSVFAQYVE-SGLPLGYLFYNDEEELEEYKPLFTELAKK--NRGL-MNFVSIDARKFGRHAGNLNMK-------EQ 71 (125)
T ss_dssp CBCCHHHHHHHHH-TTSCEEEEEESSHHHHHHHHHHHHHHHHH--TTTT-CEEEEEEHHHHTTHHHHTTCC-------SC
T ss_pred CccCHHHHHHHHh-cCCCEEEEEeCChHHHHHHHHHHHHHHHH--hcCe-eEEEEEchHHhHHHHHHcCCC-------cc
Confidence 4566666555553 33445666666667788999999999999 9998 999999998888888888332 35
Q ss_pred eeEEEEEcCCc-ceEeeccCCccc---ccccccccHHHHHHHhhhhhcCCcc
Q psy12972 1159 IAAMWRMDYKK-IKYGWLLGDAVD---DWKDYNTTKDRLDAGLRSLVNDPYN 1206 (1578)
Q Consensus 1159 lp~l~~~n~~~-~kY~~l~~~~~~---~~~~~~~t~e~l~~fL~~ll~g~~~ 1206 (1578)
.|.+++.+..+ .+|.+....... .-.....|.+.|..|++.+++|...
T Consensus 72 ~P~~~i~~~~~~~ky~~~~~~~~~~~~~~~~~e~t~~~i~~F~~d~l~GKlk 123 (125)
T d2b5ea3 72 FPLFAIHDMTEDLKYGLPQLSEEAFDELSDKIVLESKAIESLVKDFLKGDAS 123 (125)
T ss_dssp SSEEEEEETTTTEEEECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHHHTCCC
T ss_pred CCcEEEEecccCcccccchhhhhhcccccccccCCHHHHHHHHHHHHcCCcC
Confidence 67777777655 899865321000 0012357999999999999999875
|
| >d1o8xa_ c.47.1.10 (A:) Tryparedoxin I {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Tryparedoxin I species: Crithidia fasciculata [TaxId: 5656]
Probab=97.74 E-value=1.9e-05 Score=79.16 Aligned_cols=69 Identities=19% Similarity=0.360 Sum_probs=56.0
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCC-ceEEEEEECccc------------------------hhhHhHcCcc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHVHNE------------------------QGLARRLGVG 927 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~-~v~~a~VDc~~~------------------------~~L~~k~gV~ 927 (1578)
.++++|.|+++||++|+...|.+.++.+++... ++.+..|+.+.+ .++++.|+|.
T Consensus 26 GK~vll~Fwa~wC~~C~~~~~~l~~l~~~~~~~~~~~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~y~v~ 105 (144)
T d1o8xa_ 26 GKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVE 105 (144)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCC
T ss_pred CCEEEEEeccccccccccccchhHHhhhhcccccccccccccccccHHHHHHHHhhccccceeeecccchhhHHHHcCCC
Confidence 678999999999999999999999999999654 477777776431 2588899999
Q ss_pred ccCCcEEEEc-C-Cccc
Q psy12972 928 SQLPQIALLT-D-GRTS 942 (1578)
Q Consensus 928 ~~~PTl~lf~-~-G~~~ 942 (1578)
+ +||++++. + |+++
T Consensus 106 ~-~Pt~~liD~~~G~Vi 121 (144)
T d1o8xa_ 106 S-IPTLIGVDADSGDVV 121 (144)
T ss_dssp S-SSEEEEEETTTCCEE
T ss_pred c-CCEEEEEeCCCCEEE
Confidence 8 99999994 4 4543
|
| >d2cvba1 c.47.1.10 (A:2-188) Probable thiol-disulfide isomerase/thioredoxin TTHA0593 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Probable thiol-disulfide isomerase/thioredoxin TTHA0593 species: Thermus thermophilus [TaxId: 274]
Probab=97.62 E-value=3.5e-05 Score=81.06 Aligned_cols=74 Identities=12% Similarity=0.161 Sum_probs=58.5
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc-----------------------------cchhhHhH
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-----------------------------NEQGLARR 923 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~-----------------------------~~~~L~~k 923 (1578)
.++++|.||++||++|++..|.+.++++++++. +.+..|+.. .+..++++
T Consensus 32 Gk~vvl~FwatwCp~C~~~~p~l~~l~~~y~~~-v~~v~i~snd~~~~~~~~~e~~~~~~~~~~~~~p~l~D~~~~~~~~ 110 (187)
T d2cvba1 32 EPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 110 (187)
T ss_dssp SSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCeEEEEEeCCCCccchhhhhhhhhhhhhcccc-ceeeeeeccccccccccchHHHHHHHHHhCCcceeeechhhhhccc
Confidence 578999999999999999999999999999875 777777631 23368999
Q ss_pred cCccccCCcEEEEc-CCccccccCCCCC
Q psy12972 924 LGVGSQLPQIALLT-DGRTSFFKEPSFS 950 (1578)
Q Consensus 924 ~gV~~~~PTl~lf~-~G~~~~y~~G~~s 950 (1578)
|++.+ +|+.+++. +|+. .|. |..+
T Consensus 111 ~~v~~-~P~~~liD~~G~i-~y~-G~id 135 (187)
T d2cvba1 111 YRALR-TPEVFLFDERRLL-RYH-GRVN 135 (187)
T ss_dssp TTCCE-ESEEEEECTTCBE-EEE-ECSS
T ss_pred ccccc-eeeEEEEcCCCeE-EEE-eeec
Confidence 99997 99999884 4543 443 5443
|
| >d1sena_ c.47.1.1 (A:) Thioredoxin-like protein p19, TLP19 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin-like protein p19, TLP19 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.62 E-value=5e-06 Score=82.76 Aligned_cols=45 Identities=22% Similarity=0.497 Sum_probs=34.0
Q ss_pred ccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc
Q psy12972 763 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL 808 (1578)
Q Consensus 763 ~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~ 808 (1578)
.+++++||.|||+||++|+.+.|++.+..+..+ ....++.++++.
T Consensus 23 ~~~Kpvlv~F~a~wC~~C~~~~~~~~~~~~~~~-~~~~fv~v~vd~ 67 (135)
T d1sena_ 23 ASGLPLMVIIHKSWCGACKALKPKFAESTEISE-LSHNFVMVNLED 67 (135)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHH-HHTTSEEEEEEG
T ss_pred HcCCcEEEEEEecCCCCceecchhhhhhHHHHH-hcCCcEEEeCCC
Confidence 468999999999999999999999988765433 333455555553
|
| >d1jfua_ c.47.1.10 (A:) Membrane-anchored thioredoxin-like protein TlpA, soluble domain {Bradyrhizobium japonicum [TaxId: 375]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Membrane-anchored thioredoxin-like protein TlpA, soluble domain species: Bradyrhizobium japonicum [TaxId: 375]
Probab=97.61 E-value=4.4e-05 Score=79.31 Aligned_cols=89 Identities=13% Similarity=0.297 Sum_probs=64.6
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccc-h----h-------------------h----HhHc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE-Q----G-------------------L----ARRL 924 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~-~----~-------------------L----~~k~ 924 (1578)
.++++|.|+++||++|+...+...++.+.+.+.++.+..|..+.+ . + + ...+
T Consensus 56 GK~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 135 (176)
T d1jfua_ 56 GKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIG 135 (176)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTT
T ss_pred CCEEEEEeccCcccchHHHHHhhhhccccccccccccccccccccchhhhhhhHhhhCCcceeeeecchhHHHHHHhhhc
Confidence 689999999999999999999999999999877777777765421 1 1 1 2233
Q ss_pred CccccCCcEEEE-cCCccccccCCC--CCHHHHHHHHHhhC
Q psy12972 925 GVGSQLPQIALL-TDGRTSFFKEPS--FSVQKMVEFFRLKL 962 (1578)
Q Consensus 925 gV~~~~PTl~lf-~~G~~~~y~~G~--~s~~~L~~fi~~~l 962 (1578)
++.+ +|+.+++ ++|++...+.|. .+.++++++|+..+
T Consensus 136 ~v~~-~P~~~lID~~G~I~~~~~G~~~~~~~e~~~~l~al~ 175 (176)
T d1jfua_ 136 RALG-MPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAAT 175 (176)
T ss_dssp CCSS-SSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHH
T ss_pred cCCC-CCeEEEEcCCCEEEEEEECCCCCChHHHHHHHHHhc
Confidence 5565 7998877 677776555564 34577888887654
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.59 E-value=1.6e-05 Score=93.53 Aligned_cols=90 Identities=18% Similarity=0.221 Sum_probs=57.7
Q ss_pred ccCCcccccccceEEEEEEecC-CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 405 SFDENPIAAASLAQVFRAVTKE-GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 405 ~fd~~PlasaSiaQVhrA~l~~-G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
.++-++||-|.+..||+.+..+ |+.|+||-..|.++.. +.-.| ..... .
T Consensus 28 ~l~~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~---------------g~~~~-~~~~R--------------~ 77 (392)
T d2pula1 28 TLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVV---------------GESWP-LTIDR--------------A 77 (392)
T ss_dssp CCEEEECCSSSSEEEEEEEC----CEEEEEEECCGGGC-----------------CCCC-CCTTH--------------H
T ss_pred CeeEEEeCCCceEeEEEEEeCCCCeEEEEecCCchhccc---------------CCCCC-CCHHH--------------H
Confidence 4455789999999999998764 7899999888776421 00000 11000 1
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKI 528 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l 528 (1578)
+.|++.+..++.. ....+|++|..-....+|+|||++|.++
T Consensus 78 ~~E~~~L~~~~~~----~p~~vP~v~~~d~~~~~lvmE~L~~~~~ 118 (392)
T d2pula1 78 RIESSALIRQGEH----VPHLVPRVFYSDTEMAVTVMEDLSHLKI 118 (392)
T ss_dssp HHHHHHHHHHHTT----CGGGSCCEEEEETTTTEEEECCCTTSEE
T ss_pred HHHHHHHHHhhhh----CCCCcceEEEEcCCCCEEEEeccCCccc
Confidence 3466666555432 3357899987656678999999998765
|
| >d1a8ya2 c.47.1.3 (A:127-228) Calsequestrin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Calsequestrin domain: Calsequestrin species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.57 E-value=8.2e-05 Score=70.09 Aligned_cols=96 Identities=10% Similarity=0.076 Sum_probs=74.9
Q ss_pred ccccccHHHHhhcccCCCcEEEEEeccCCchHHHHHHHHh-hcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEecc
Q psy12972 969 PLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAF-KHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKE 1047 (1578)
Q Consensus 969 ~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~a~-~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~ 1047 (1578)
+.+.++++.|++.. +...+|+||.+..++....+..++ .+++.+.||.+ .+++++++++++ .|++++|+.
T Consensus 4 i~~~~e~~~F~~~~--d~v~VvGfF~~~~~~~~~~F~~~A~~~rd~~~F~~t-----~d~~va~~~~v~--~~~vvlfr~ 74 (102)
T d1a8ya2 4 IEGERELQAFENIE--DEIKLIGYFKNKDSEHYKAFKEAAEEFHPYIPFFAT-----FDSKVAKKLTLK--LNEIDFYEA 74 (102)
T ss_dssp ECSHHHHHHHTTCC--SSCEEEEECSSTTCHHHHHHHHHHHHHTTTSCEEEE-----CCHHHHHHHCCC--TTCEEEECT
T ss_pred ecCHHHHHHHhccC--CCEEEEEEECCCCcHHHHHHHHHHHHcCCCceEEEE-----CCHHHHHHcCCC--CCCEEEeee
Confidence 34567789999742 368999999887778777777765 67899999999 899999999995 489999987
Q ss_pred CCCCCccccccCCCCchhhhhhhhcCC
Q psy12972 1048 DKDRPSASITMNSIPVPTLQDITDNNP 1074 (1578)
Q Consensus 1048 ~~~~~~~~l~~~~l~~~~L~~fI~~nk 1074 (1578)
..++...+ ....++...|..||..|+
T Consensus 75 fde~~~~~-~~~~~t~~~i~~Fi~~n~ 100 (102)
T d1a8ya2 75 FMEEPVTI-PDKPNSEEEIVNFVEEHR 100 (102)
T ss_dssp TCSSEEEC-SSSSCCHHHHHHHHHHTC
T ss_pred cCCCceec-CCCCCCHHHHHHHHHHhc
Confidence 65555443 223467889999999985
|
| >d2trcp_ c.47.1.6 (P:) Phosducin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Phosducin domain: Phosducin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.40 E-value=1e-05 Score=87.32 Aligned_cols=76 Identities=16% Similarity=0.121 Sum_probs=51.2
Q ss_pred ccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecccCccccccCCccccccccccccCc
Q psy12972 753 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDLFGTTDGFSGQDSASRNFHNHMYNP 832 (1578)
Q Consensus 753 ~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~~~~~~~i~g~~~~~~~~~~i~~~P 832 (1578)
.+|...+.+.+.+..++|.||+|||++|+.|.|.++++|..+... .++.++.+... .+.. ..+...|
T Consensus 108 ~~f~~~v~~~~~~~~Vvvhfy~~~~~~C~~~~~~l~~lA~~~~~v--kF~ki~~~~~~---~~~~--------~~i~~lP 174 (217)
T d2trcp_ 108 EQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPMV--KFCKIRASNTG---AGDR--------FSSDVLP 174 (217)
T ss_dssp HHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCTTS--EEEEEEHHHHT---CSTT--------SCGGGCS
T ss_pred HHHHHHHHhcCCCCeEEEEEEcCCCCChhhhhhhHHHHhhhcccc--eEEEEccccch---hHHh--------CCCCCCC
Confidence 356666655566677899999999999999999999999988654 34433332211 1111 1233449
Q ss_pred ccccccccc
Q psy12972 833 FDDVFSEGF 841 (1578)
Q Consensus 833 tiklf~~~~ 841 (1578)
|+.+|..|-
T Consensus 175 tl~~yk~G~ 183 (217)
T d2trcp_ 175 TLLVYKGGE 183 (217)
T ss_dssp EEEEEETTE
T ss_pred eEEEEECCE
Confidence 998888663
|
| >d1z6na1 c.47.1.1 (A:1-166) Hypothetical protein PA1234 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Hypothetical protein PA1234 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.01 E-value=0.00023 Score=73.12 Aligned_cols=63 Identities=11% Similarity=0.121 Sum_probs=51.5
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccc--cCCcEEEEc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGS--QLPQIALLT 937 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~--~~PTl~lf~ 937 (1578)
.+..++.|+++||++|++..|.+.+++...++ +.+..|+.+.+++...+|...+ .+|.+++..
T Consensus 54 ~~~~~l~~~~tWC~~C~~~~P~l~~l~~~~~~--~~~~~i~~d~~~~~~~~~~~~~~~~~p~~~~~d 118 (166)
T d1z6na1 54 RRYRLLVAGEMWCPDCQINLAALDFAQRLQPN--IELAIISKGRAEDDLRQRLALERIAIPLVLVLD 118 (166)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHHHHHCTT--EEEEEECHHHHHHHTTTTTTCSSCCSSEEEEEC
T ss_pred CCeEEEEEEeCcCccHHHHHHHHHHHHHHCCC--CcEEEEECccCHHHHHHHHHhccccccceeecC
Confidence 56678889999999999999999999998764 6777888888889999885543 267777663
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=96.98 E-value=0.00057 Score=74.53 Aligned_cols=74 Identities=20% Similarity=0.164 Sum_probs=48.8
Q ss_pred cccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q psy12972 413 AASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAER 492 (1578)
Q Consensus 413 saSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r 492 (1578)
.+|.+.||+... +|+.++||+..++..... .++..|++.++.
T Consensus 24 G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~-------------------------------------~~~~~E~~~l~~ 65 (263)
T d1j7la_ 24 GMSPAKVYKLVG-ENENLYLKMTDSRYKGTT-------------------------------------YDVEREKDMMLW 65 (263)
T ss_dssp CCSSSEEEEEEC-SSCEEEEEEECGGGTTST-------------------------------------TCHHHHHHHHHH
T ss_pred CCCCCcEEEEEe-CCCeEEEEEcCCCcccch-------------------------------------hhHHHHHHHHHH
Confidence 455678998764 566788888765533210 124566666666
Q ss_pred HHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCc
Q psy12972 493 CSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISD 530 (1578)
Q Consensus 493 ~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d 530 (1578)
++. .+.||+++.. -....+||||+++|.++.+
T Consensus 66 l~~------~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~ 99 (263)
T d1j7la_ 66 LEG------KLPVPKVLHFERHDGWSNLLMSEADGVLCSE 99 (263)
T ss_dssp HTT------TSCCCCEEEEEEETTEEEEEEECCSSEEHHH
T ss_pred Hhc------cCCCCcEEEEEecCCceEEEEEecccccccc
Confidence 642 4778999853 2345689999999988753
|
| >d2fy6a1 c.47.1.10 (A:33-175) Peptide methionine sulfoxide reductase MsrA/MsrB, N-terminal domain {Neisseria meningitidis serogroup A [TaxId: 65699]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Peptide methionine sulfoxide reductase MsrA/MsrB, N-terminal domain species: Neisseria meningitidis serogroup A [TaxId: 65699]
Probab=96.98 E-value=0.00015 Score=72.29 Aligned_cols=43 Identities=26% Similarity=0.455 Sum_probs=37.2
Q ss_pred ccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeee
Q psy12972 763 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVH 805 (1578)
Q Consensus 763 ~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~ 805 (1578)
-.+++++|.|||+||++|++..|.+.+++++++..++.++.+.
T Consensus 21 ~~gk~vvl~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~i~v~ 63 (143)
T d2fy6a1 21 KKDKPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITVA 63 (143)
T ss_dssp CTTSCEEEEEECTTCHHHHTTHHHHHHHHHCGGGTTSEEEEEE
T ss_pred hCCCEEEEEEECCCCccccccCcchhhhhhhhccCCcEEEEEe
Confidence 3578999999999999999999999999999987776665554
|
| >d1i5ga_ c.47.1.10 (A:) Tryparedoxin II {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Tryparedoxin II species: Crithidia fasciculata [TaxId: 5656]
Probab=96.89 E-value=0.00014 Score=72.92 Aligned_cols=44 Identities=11% Similarity=0.314 Sum_probs=36.1
Q ss_pred cCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeec
Q psy12972 764 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYD 807 (1578)
Q Consensus 764 ~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~ 807 (1578)
.+++++|.|+|+||++|++..|...++++++++. ++.++.+..+
T Consensus 27 ~GK~vll~FwAtWC~pC~~~~p~L~~l~~~~~~~~~~~vi~vs~D 71 (144)
T d1i5ga_ 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWD 71 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC
T ss_pred CCCEEEEEEEecCCchHhhhhHhHHHHHHHHHhccCcEEEEEecc
Confidence 4678999999999999999999999999999865 4555544333
|
| >d1zzoa1 c.47.1.10 (A:45-178) Lipoprotein DsbF {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Lipoprotein DsbF species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.66 E-value=0.00022 Score=70.17 Aligned_cols=36 Identities=17% Similarity=0.572 Sum_probs=32.3
Q ss_pred cCccceeccccccccccccchHHHHHHHHHhcCCCc
Q psy12972 764 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGV 799 (1578)
Q Consensus 764 ~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~v 799 (1578)
.+++++|.|+|+||++|++..|.+.+++++.++..+
T Consensus 24 ~Gk~vll~fwa~wC~~C~~~~p~l~~l~~~~~~~~~ 59 (134)
T d1zzoa1 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTF 59 (134)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEE
T ss_pred CCCEEEEEecccccCcccccchhhHHHHhhhccccc
Confidence 357899999999999999999999999999876654
|
| >d1o73a_ c.47.1.10 (A:) Tryparedoxin I {Trypanosoma brucei brucei [TaxId: 5702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Tryparedoxin I species: Trypanosoma brucei brucei [TaxId: 5702]
Probab=96.63 E-value=0.00028 Score=70.49 Aligned_cols=44 Identities=14% Similarity=0.467 Sum_probs=35.8
Q ss_pred cCccceeccccccccccccchHHHHHHHHHhcC-CCcceeeeeec
Q psy12972 764 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSP-LGVGFFTVHYD 807 (1578)
Q Consensus 764 ~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~-~~vg~v~~~~~ 807 (1578)
.+++++|.|||+||++|++..|...++++++.+ .++.++.+..+
T Consensus 27 ~GK~vvl~FwatwC~~C~~~~p~l~~l~~~~~~~~~~~vi~is~d 71 (144)
T d1o73a_ 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWD 71 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC
T ss_pred CCCEEEEEeChhhCccchhhhHHHHHHHHHHhhccCeEEEEEecc
Confidence 467899999999999999999999999999964 35655555433
|
| >d1lu4a_ c.47.1.10 (A:) Soluble secreted antigen MPT53 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Soluble secreted antigen MPT53 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.59 E-value=0.00026 Score=69.84 Aligned_cols=36 Identities=17% Similarity=0.506 Sum_probs=31.4
Q ss_pred cCccceeccccccccccccchHHHHHHHHHhcCCCc
Q psy12972 764 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGV 799 (1578)
Q Consensus 764 ~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~v 799 (1578)
.+++++|.|||+||++|+...|.+++++++.++..+
T Consensus 23 ~Gk~vll~F~a~wC~~C~~~~p~l~~~~~~~~~v~~ 58 (134)
T d1lu4a_ 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTF 58 (134)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEE
T ss_pred CCCEEEEEEeecccCCceecchhHHHHhhhhccccc
Confidence 367999999999999999999999999998765543
|
| >d2djka1 c.47.1.2 (A:1-133) Protein disulfide isomerase, PDI {Fungi (Humicola insolens) [TaxId: 34413]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: PDI-like domain: Protein disulfide isomerase, PDI species: Fungi (Humicola insolens) [TaxId: 34413]
Probab=96.54 E-value=0.0012 Score=64.90 Aligned_cols=103 Identities=13% Similarity=0.131 Sum_probs=79.5
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccc-cCCcEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGS-QLPQIA 934 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~-~~PTl~ 934 (1578)
.++|.+|+.... +...|.++.|+++. .....+...+.++|+.++++ +.|+.+|.+.+....+.||+.+ .+|+++
T Consensus 9 ~e~~~~n~~~~~---~~~~pl~~lf~~~~-~~~~~~~~~~~~vA~~~~~k-i~Fv~vd~~~~~~~l~~~gl~~~~~P~~~ 83 (133)
T d2djka1 9 GEIGPETYSDYM---SAGIPLAYIFAETA-EERKELSDKLKPIAEAQRGV-INFGTIDAKAFGAHAGNLNLKTDKFPAFA 83 (133)
T ss_dssp EECCHHHHHHHH---HTTSCEEEEECSCS-SSHHHHHHHHHHHHHSSTTT-SEEEEECTTTTGGGTTTTTCCSSSSSEEE
T ss_pred eccChhhHHHHh---cCCCCEEEEEeCCc-hHHHHHHHHHHHHHHHhcCc-eEEEEEeHHHhHHHHHHhcCCcccCCcEE
Confidence 367888888866 34678888787654 45678889999999999987 9999999999888999999954 489998
Q ss_pred EEcC--Cccccc-cCCCCCHHHHHHHHHhhCC
Q psy12972 935 LLTD--GRTSFF-KEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 935 lf~~--G~~~~y-~~G~~s~~~L~~fi~~~lp 963 (1578)
++.. +....+ ..+..+.++|.+|+.+.+.
T Consensus 84 i~~~~~~~~~~~~~~~~i~~~~i~~Fi~d~~~ 115 (133)
T d2djka1 84 IQEVAKNQKFPFDQEKEITFEAIKAFVDDFVA 115 (133)
T ss_dssp EECTTTCCBCCCCSSSCCCHHHHHHHHHHHHH
T ss_pred EEEcCCCceecCCccccCCHHHHHHHHHHHHc
Confidence 8743 323222 2467899999999987653
|
| >d2b5ea3 c.47.1.2 (A:240-364) Protein disulfide isomerase, PDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: PDI-like domain: Protein disulfide isomerase, PDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.42 E-value=0.0011 Score=64.58 Aligned_cols=102 Identities=17% Similarity=0.184 Sum_probs=78.3
Q ss_pred eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEE
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALL 936 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf 936 (1578)
+++.+|+.+.+ ....|.++.||.+.- .-..+.+.+.++|+.++++ +.|+.+|.+.+....+.+|+....|.+++.
T Consensus 4 ei~~~~~~~y~---~~~~Pl~~~f~~~~~-~~~~~~~~~~~vAk~fkgk-i~Fv~~D~~~~~~~l~~fgl~e~~P~~~i~ 78 (125)
T d2b5ea3 4 EIDGSVFAQYV---ESGLPLGYLFYNDEE-ELEEYKPLFTELAKKNRGL-MNFVSIDARKFGRHAGNLNMKEQFPLFAIH 78 (125)
T ss_dssp BCCHHHHHHHH---HTTSCEEEEEESSHH-HHHHHHHHHHHHHHHTTTT-CEEEEEEHHHHTTHHHHTTCCSCSSEEEEE
T ss_pred ccCHHHHHHHH---hcCCCEEEEEeCChH-HHHHHHHHHHHHHHHhcCe-eEEEEEchHHhHHHHHHcCCCccCCcEEEE
Confidence 46777888766 446888888998753 4557899999999999997 999999999998999999997668999887
Q ss_pred cCCc--cccc------------cCCCCCHHHHHHHHHhhCC
Q psy12972 937 TDGR--TSFF------------KEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 937 ~~G~--~~~y------------~~G~~s~~~L~~fi~~~lp 963 (1578)
.... .... ..+..+.++|.+|+.+.+.
T Consensus 79 ~~~~~~ky~~~~~~~~~~~~~~~~~e~t~~~i~~F~~d~l~ 119 (125)
T d2b5ea3 79 DMTEDLKYGLPQLSEEAFDELSDKIVLESKAIESLVKDFLK 119 (125)
T ss_dssp ETTTTEEEECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHHH
T ss_pred ecccCcccccchhhhhhcccccccccCCHHHHHHHHHHHHc
Confidence 4322 2111 1356788888888877653
|
| >d2b5xa1 c.47.1.10 (A:1-143) thiol:disulfide oxidoreductase YkuV {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: thiol:disulfide oxidoreductase YkuV species: Bacillus subtilis [TaxId: 1423]
Probab=96.23 E-value=0.00073 Score=67.24 Aligned_cols=34 Identities=26% Similarity=0.461 Sum_probs=31.3
Q ss_pred cCccceeccccccccccccchHHHHHHHHHhcCC
Q psy12972 764 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL 797 (1578)
Q Consensus 764 ~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~ 797 (1578)
.++++++.|||+||++|++..|.+.++++++++.
T Consensus 28 ~~k~vvl~f~a~~C~~C~~~~p~l~~l~~~~~~~ 61 (143)
T d2b5xa1 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ 61 (143)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCEEEEEEEcCCCcchhhhhhhhhhhhhhhhcc
Confidence 5688999999999999999999999999999863
|
| >d1z5ye1 c.47.1.10 (E:49-184) Thioredoxin-like protein CcmG (CycY, DsbE) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Thioredoxin-like protein CcmG (CycY, DsbE) species: Escherichia coli [TaxId: 562]
Probab=96.15 E-value=0.00054 Score=67.55 Aligned_cols=29 Identities=17% Similarity=0.419 Sum_probs=26.5
Q ss_pred cCccceeccccccccccccchHHHHHHHH
Q psy12972 764 YTTPHLILFYSDWCFACLQVEPIFKKLMD 792 (1578)
Q Consensus 764 ~~~~~lV~FYApwCghCk~LaP~weklA~ 792 (1578)
.+++++|.|||+||++|++..|.++++++
T Consensus 19 ~Gk~vvl~FwatWC~pC~~e~p~l~~~~~ 47 (136)
T d1z5ye1 19 QGKPVLLNVWATWCPTSRAEHQYLNQLSA 47 (136)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEcCcCCCcCccccchhhhhh
Confidence 46799999999999999999999998865
|
| >d1knga_ c.47.1.10 (A:) Thioredoxin-like protein CcmG (CycY, DsbE) {Bradyrhizobium japonicum [TaxId: 375]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Thioredoxin-like protein CcmG (CycY, DsbE) species: Bradyrhizobium japonicum [TaxId: 375]
Probab=96.02 E-value=0.00053 Score=68.30 Aligned_cols=32 Identities=19% Similarity=0.569 Sum_probs=28.1
Q ss_pred cCccceeccccccccccccchHHHHHHHHHhc
Q psy12972 764 YTTPHLILFYSDWCFACLQVEPIFKKLMDELS 795 (1578)
Q Consensus 764 ~~~~~lV~FYApwCghCk~LaP~weklA~~Lk 795 (1578)
.+++++|.|||+||+||+...|.+.++.+..+
T Consensus 30 kgK~vll~fwa~wC~~C~~~~p~l~~l~~~~~ 61 (144)
T d1knga_ 30 KGKVSLVNVWASWCVPCHDEAPLLTELGKDKR 61 (144)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTCTT
T ss_pred CCCEEEEEeeccccccccccCchhhhhhhccC
Confidence 45789999999999999999999998876654
|
| >d1st9a_ c.47.1.10 (A:) Thiol-disulfide oxidoreductase ResA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Thiol-disulfide oxidoreductase ResA species: Bacillus subtilis [TaxId: 1423]
Probab=95.94 E-value=0.001 Score=65.42 Aligned_cols=42 Identities=19% Similarity=0.463 Sum_probs=36.3
Q ss_pred cCccceeccccccccccccchHHHHHHHHHhcCCCcceeeee
Q psy12972 764 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVH 805 (1578)
Q Consensus 764 ~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~ 805 (1578)
.+++++|.|||+||++|+...|.+.++.+.+.+.++.++...
T Consensus 24 ~gk~~li~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~i~ 65 (137)
T d1st9a_ 24 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVN 65 (137)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred CCCEEEEEEeeccccceeeccccccccccccccccccccccc
Confidence 356899999999999999999999999999988776665544
|
| >d1eeja1 c.47.1.9 (A:61-216) Disulfide bond isomerase, DsbC, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: DsbC/DsbG C-terminal domain-like domain: Disulfide bond isomerase, DsbC, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=95.94 E-value=0.0035 Score=63.19 Aligned_cols=84 Identities=17% Similarity=0.243 Sum_probs=62.0
Q ss_pred ccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEEC----------------------------------
Q psy12972 869 PKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV---------------------------------- 914 (1578)
Q Consensus 869 ~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc---------------------------------- 914 (1578)
.....+.++|.|+.+.|++|+++.|..+++.+. ++.+..+..
T Consensus 22 g~~~ak~tIv~FsD~~CpyC~~~~~~l~~~~~~----~~~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 97 (156)
T d1eeja1 22 KAPQEKHVITVFTDITCGYCHKLHEQMADYNAL----GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKS 97 (156)
T ss_dssp CCTTCCEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCC
T ss_pred cCCCCCEEEEEEeCCCCHHHHHHHHHHHHhhcc----CceEEEEeccccccchhhHHHHHHHHHhhhhhhhhHHHHhccc
Confidence 344567889999999999999999999887542 133332221
Q ss_pred ----------ccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 915 ----------HNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 915 ----------~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
..+..+++++||+| .||++ +.+|+.+ .|..+.+.|.++|.+.
T Consensus 98 ~~~~~~~~~i~~~~~la~~lgv~G-TPt~~-~~nG~~v---~G~~~~e~l~~~i~~~ 149 (156)
T d1eeja1 98 VAPASCDVDIADHYALGVQLGVSG-TPAVV-LSNGTLV---PGYQPPKEMKEFLDEH 149 (156)
T ss_dssp CCCCCCSCCHHHHHHHHHHHTCCS-SSEEE-CTTSCEE---ESCCCHHHHHHHHHHH
T ss_pred cchhhhcchHHHHHHHHHHcCCcC-CCEEE-EeCCeEe---cCCCCHHHHHHHHHHH
Confidence 12447899999998 99964 5678654 3889999999999764
|
| >d1o8xa_ c.47.1.10 (A:) Tryparedoxin I {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Tryparedoxin I species: Crithidia fasciculata [TaxId: 5656]
Probab=95.90 E-value=0.0012 Score=65.41 Aligned_cols=41 Identities=12% Similarity=0.271 Sum_probs=34.5
Q ss_pred cCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeee
Q psy12972 764 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTV 804 (1578)
Q Consensus 764 ~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~ 804 (1578)
.+++++|.|+|+||++|+...|...++++++... ++.++.+
T Consensus 25 ~GK~vll~Fwa~wC~~C~~~~~~l~~l~~~~~~~~~~~~v~i 66 (144)
T d1o8xa_ 25 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFC 66 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEE
T ss_pred CCCEEEEEeccccccccccccchhHHhhhhcccccccccccc
Confidence 4678999999999999999999999999999765 4544444
|
| >d2cx4a1 c.47.1.10 (A:4-163) Bacterioferritin comigratory protein {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Bacterioferritin comigratory protein species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=95.77 E-value=0.0066 Score=60.99 Aligned_cols=90 Identities=12% Similarity=0.211 Sum_probs=63.6
Q ss_pred CCcEEEEEE-cCCCcccccccHHHHHHHHHhCCCceEEEEEECc---------------------cchhhHhHcCccc--
Q psy12972 873 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH---------------------NEQGLARRLGVGS-- 928 (1578)
Q Consensus 873 ~~~~LV~Fy-apwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~---------------------~~~~L~~k~gV~~-- 928 (1578)
.++++|.|| +.||++|..-.+.+.++...+++.++.+..+..+ .+..+++.||+..
T Consensus 30 gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~ 109 (160)
T d2cx4a1 30 GRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKLYNVYHED 109 (160)
T ss_dssp SSCEEEEECSCTTCHHHHHHHHHHHHTCTTTSTTCCEEEEEESSCHHHHHHHHHHHTCSSEEEECTTSHHHHHTTCEEEE
T ss_pred CCEEEEEecccccCCchhhhhhhhhcccccccccccccccccccchhhhhhhcccceeeEEEeecCCcchHHHcCccccc
Confidence 578899998 8999999999999999999998887777777643 2346788888731
Q ss_pred -------cCCcEEEE-cCCcccccc-----CCCCCHHHHHHHHHhhC
Q psy12972 929 -------QLPQIALL-TDGRTSFFK-----EPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 929 -------~~PTl~lf-~~G~~~~y~-----~G~~s~~~L~~fi~~~l 962 (1578)
..|+.+++ ++|+....+ .+..+.+++++-+++.+
T Consensus 110 ~~~~~~~~~~~~flId~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~ 156 (160)
T d2cx4a1 110 LKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIA 156 (160)
T ss_dssp ETTEEEEECCEEEEECTTSBEEEEEECSSTTCCCCHHHHHHHHHHHH
T ss_pred cccccccceeeEEEEcCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHc
Confidence 14776666 677654211 13345667777666554
|
| >d2bmxa1 c.47.1.10 (A:2-170) Alkyl hydroperoxide reductase AhpC {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Alkyl hydroperoxide reductase AhpC species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.75 E-value=0.0085 Score=61.00 Aligned_cols=86 Identities=17% Similarity=0.339 Sum_probs=62.1
Q ss_pred CCcEEEEEE-cCCCcccccccHHHHHHHHHhCCCceEEEEEECcc-------------------------chhhHhHcCc
Q psy12972 873 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-------------------------EQGLARRLGV 926 (1578)
Q Consensus 873 ~~~~LV~Fy-apwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~-------------------------~~~L~~k~gV 926 (1578)
.+++++.|| +.||+.|..-.+.+.+...+++..|+.+..|..+. +.++++.|||
T Consensus 44 GK~vvl~f~p~~~~p~C~~~~~~~~~~~~~~~~~g~~vv~is~d~~~~~~~~~~~~~~~~~~~f~ll~D~~~~v~~~ygv 123 (169)
T d2bmxa1 44 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGV 123 (169)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTC
T ss_pred CCeEEEEEecCCCCccccccccccccccccccccCcceeeccccchhhhhhhcccccccccceEEEEeccHHHHHHHcCC
Confidence 467788888 99999999999999999999998888888887642 3368888887
Q ss_pred -----cccCCcEEEE-cCCccccc--cC--CCCCHHHHHHHHH
Q psy12972 927 -----GSQLPQIALL-TDGRTSFF--KE--PSFSVQKMVEFFR 959 (1578)
Q Consensus 927 -----~~~~PTl~lf-~~G~~~~y--~~--G~~s~~~L~~fi~ 959 (1578)
.. .|+.+++ ++|++... +. -.++.+++.+.++
T Consensus 124 ~~~~~~~-~r~~fvID~~G~I~~~~~~~~~~~~~~~evl~~l~ 165 (169)
T d2bmxa1 124 LNADGVA-DRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLD 165 (169)
T ss_dssp BCTTSSB-CEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHH
T ss_pred CccCCcc-ceeEEEEcCCCEEEEEEEcCCCCCCCHHHHHHHHH
Confidence 33 5766666 46765321 11 1356677777665
|
| >d1e2ya_ c.47.1.10 (A:) Tryparedoxin peroxidase (thioredoxin peroxidase homologue) {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Tryparedoxin peroxidase (thioredoxin peroxidase homologue) species: Crithidia fasciculata [TaxId: 5656]
Probab=95.74 E-value=0.0097 Score=60.46 Aligned_cols=87 Identities=14% Similarity=0.293 Sum_probs=60.9
Q ss_pred CCcEEEEEE-cCCCcccccccHHHHHHHHHhCCCceEEEEEECcc----------------------------chhhHhH
Q psy12972 873 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------------EQGLARR 923 (1578)
Q Consensus 873 ~~~~LV~Fy-apwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~----------------------------~~~L~~k 923 (1578)
.++++|.|| +.||+.|..-.+.+.+...+++..++.+..|..+. +..+++.
T Consensus 33 GK~vVl~F~p~~~c~~C~~e~~~l~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~ 112 (167)
T d1e2ya_ 33 GKYVVLFFYPMDFTFVCPTEIIQFSDDAKRFAEINTEVISCSCDSEYSHLQWTSVDRKKGGLGPMAIPMLADKTKAIARA 112 (167)
T ss_dssp TSEEEEEECSCSSCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCCCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEcccccccccchhhHHHHHHHHHhhcCceEEEeecCCcHHhHHHHHhhHHHhcccccccccccccchhHHHHH
Confidence 467899998 99999999999999999999998888888887643 2346777
Q ss_pred cCcc----c-cCCcEEEE-cCCccccccC----CCCCHHHHHHHHH
Q psy12972 924 LGVG----S-QLPQIALL-TDGRTSFFKE----PSFSVQKMVEFFR 959 (1578)
Q Consensus 924 ~gV~----~-~~PTl~lf-~~G~~~~y~~----G~~s~~~L~~fi~ 959 (1578)
|++. + .+|+..++ ++|.+...+. ..++.+++++.++
T Consensus 113 y~v~~~~~g~~~r~tfvID~~G~Ir~~~~~~~~~~~~~~evL~~l~ 158 (167)
T d1e2ya_ 113 YGVLDEDSGVAYRGVFIIDPNGKLRQIIINDMPIGRNVEEVIRLVE 158 (167)
T ss_dssp HTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHH
T ss_pred cCCCcccCCCceeEEEEECCCCEEEEEEEcCCCCCCCHHHHHHHHH
Confidence 7772 1 14555555 5676532211 2345667776664
|
| >d1bjxa_ c.47.1.2 (A:) Protein disulfide isomerase, PDI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: PDI-like domain: Protein disulfide isomerase, PDI species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.62 E-value=0.0076 Score=57.05 Aligned_cols=92 Identities=10% Similarity=0.149 Sum_probs=68.7
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCc-cccccCCCCC
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGR-TSFFKEPSFS 950 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~-~~~y~~G~~s 950 (1578)
.+..++|.|+.+--+. ....|.++|+.+++ +.|+.+ .+.++++++|++. |+|++|++.. ...++.|..+
T Consensus 17 ~~~v~VVGfF~~~~~~---~~~~F~~~A~~~~d--~~F~~t---~~~~v~~~~~v~~--~~Ivl~k~~de~~~~~~~~~~ 86 (110)
T d1bjxa_ 17 SSEVAVIGFFKDVESD---SAKQFLQAAEAIDD--IPFGIT---SNSDVFSKYQLDK--DGVVLFKKFDEGRNNFEGEVT 86 (110)
T ss_dssp HSSEEEEEECTTTTSH---HHHHHHHHHHHCSS--SCEEEE---CCSHHHHHTTCSS--CEEEEEESSSSSBCCCCSCCC
T ss_pred cCCeEEEEEEcCCCch---HHHHHHHHHHhCcC--ceEEEE---CCHHHHHHcCCCC--CeEEEeccCCccccccCCCCC
Confidence 4678899998764333 35689999999864 677764 4567999999964 9999998743 4456678999
Q ss_pred HHHHHHHHHhhCCCcccccccccc
Q psy12972 951 VQKMVEFFRLKLPYKLIVPLSATN 974 (1578)
Q Consensus 951 ~~~L~~fi~~~lp~~vv~~it~~~ 974 (1578)
.++|.+||..+.-| ++.+.|.++
T Consensus 87 ~~~l~~fi~~~~~P-lV~e~~~e~ 109 (110)
T d1bjxa_ 87 KENLLDFIKHNQLP-LVIEFTEQT 109 (110)
T ss_dssp HHHHHHHHHHHSSC-CCSSCCCTT
T ss_pred HHHHHHHHHHcCcC-cEEecCCCC
Confidence 99999999876643 466666554
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.49 E-value=0.01 Score=68.71 Aligned_cols=98 Identities=14% Similarity=0.105 Sum_probs=66.0
Q ss_pred hHHHHHHHHhCCChhhh-ccccCCcccccccceEEEEEEecC--------CCEEEEEEecchhhhhHHHHHHHHHHHHHH
Q psy12972 386 EVDQLFLEDFGCTHSQL-FRSFDENPIAAASLAQVFRAVTKE--------GVEVAVKVQYIDLRERFVGDIATVQTLLRI 456 (1578)
Q Consensus 386 ~v~~~~~~~lG~~~~~i-F~~fd~~PlasaSiaQVhrA~l~~--------G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~ 456 (1578)
.++++..+-+|..|..+ -+++.-+||+.|-.-++|+..+.+ ++.|+|+|-- +...
T Consensus 24 ~~~~~~~~~l~~~W~~~~~~~l~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~~--------------- 87 (395)
T d1nw1a_ 24 RAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPET--------------- 87 (395)
T ss_dssp HHHHHHHHHHCTHHHHCCGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCCC---------------
T ss_pred HHHHHHHHhCcccccCCCccceEEEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Ccch---------------
Confidence 34556666677766553 235566899999999999998764 3568887742 2111
Q ss_pred HhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCc
Q psy12972 457 AGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISD 530 (1578)
Q Consensus 457 ~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d 530 (1578)
.+|-.+|.++++.+.+. ++ .|++|.- ....+||||++|.++..
T Consensus 88 -----------------------~idr~~E~~i~~~ls~~-----gl-~Pkll~~--~~~g~I~efi~g~~l~~ 130 (395)
T d1nw1a_ 88 -----------------------ESHLVAESVIFTLLSER-----HL-GPKLYGI--FSGGRLEEYIPSRPLSC 130 (395)
T ss_dssp -----------------------HHHHHHHHHHHHHHHHT-----TS-SSCEEEE--ETTEEEECCCCEEECCT
T ss_pred -----------------------hhHHHHHHHHHHHHHhC-----CC-CCeEEEE--cCCceEEEEeccccCCh
Confidence 12335677888777652 23 6888854 35689999999988774
|
| >d1z6na1 c.47.1.1 (A:1-166) Hypothetical protein PA1234 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Hypothetical protein PA1234 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.20 E-value=0.002 Score=65.74 Aligned_cols=39 Identities=10% Similarity=0.140 Sum_probs=32.2
Q ss_pred cCccceeccccccccccccchHHHHHHHHHhcCCCccee
Q psy12972 764 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFF 802 (1578)
Q Consensus 764 ~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v 802 (1578)
.++..++.|+|+||++|++..|...++++...+..+.++
T Consensus 53 ~~~~~~l~~~~tWC~~C~~~~P~l~~l~~~~~~~~~~~i 91 (166)
T d1z6na1 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQPNIELAII 91 (166)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred cCCeEEEEEEeCcCccHHHHHHHHHHHHHHCCCCcEEEE
Confidence 456678889999999999999999999998775554443
|
| >d1t3ba1 c.47.1.9 (A:61-210) Disulfide bond isomerase, DsbC, C-terminal domain {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: DsbC/DsbG C-terminal domain-like domain: Disulfide bond isomerase, DsbC, C-terminal domain species: Haemophilus influenzae [TaxId: 727]
Probab=95.16 E-value=0.013 Score=58.43 Aligned_cols=83 Identities=16% Similarity=0.249 Sum_probs=60.6
Q ss_pred ccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEEC----------------------------------
Q psy12972 869 PKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV---------------------------------- 914 (1578)
Q Consensus 869 ~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc---------------------------------- 914 (1578)
.....+.+++.|+.+.|++|+++.|..+++.+. ++.+..+.-
T Consensus 22 g~~~ak~~I~~FsD~~CPyC~~~~~~l~~l~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~~~~~~~~ 97 (150)
T d1t3ba1 22 PAKNEKHVVTVFMDITCHYCHLLHQQLKEYNDL----GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNL 97 (150)
T ss_dssp CCTTCSEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCC
T ss_pred CCCCCCEEEEEEECCCCHHHHHHhHHHHHHhcc----CceEEEEEecccccchhHHHHHHHHHHhhhHHHhhHhHhhhcc
Confidence 334566789999999999999999998888653 123322220
Q ss_pred ----------ccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHHHHHHh
Q psy12972 915 ----------HNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRL 960 (1578)
Q Consensus 915 ----------~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~ 960 (1578)
..+..+++++||+| .||+++ .+|+.+ .|..+.+.|.+.|.+
T Consensus 98 ~~~~~~~~~i~~~~~la~~lGv~G-TPt~~~-~nG~~i---~G~~~~~~l~~~l~~ 148 (150)
T d1t3ba1 98 PKEVKTPNIVKKHYELGIQFGVRG-TPSIVT-STGELI---GGYLKPADLLRALEE 148 (150)
T ss_dssp CSSCCCSSHHHHHHHHHHHHTCCS-SCEEEC-TTSCCC---CSCCCHHHHHHHHHH
T ss_pred ccchhhhhHHHHHHHHHHhcCcCC-CCEEEE-cCCcEe---cCCCCHHHHHHHHHh
Confidence 12447899999998 998774 577643 488899999998865
|
| >d1uula_ c.47.1.10 (A:) Tryparedoxin peroxidase (thioredoxin peroxidase homologue) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Tryparedoxin peroxidase (thioredoxin peroxidase homologue) species: Trypanosoma cruzi [TaxId: 5693]
Probab=94.87 E-value=0.024 Score=59.08 Aligned_cols=88 Identities=14% Similarity=0.274 Sum_probs=64.8
Q ss_pred CCcEEEEEE-cCCCcccccccHHHHHHHHHhCCCceEEEEEECcc----------------------------chhhHhH
Q psy12972 873 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------------EQGLARR 923 (1578)
Q Consensus 873 ~~~~LV~Fy-apwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~----------------------------~~~L~~k 923 (1578)
.+++++.|| ++||+.|..-.+.+.++.+++...++.+..|.++. +.++|+.
T Consensus 33 GK~vVL~FyP~~~t~~C~~E~~~f~~~~~~f~~~g~~VlgIS~Ds~~s~~~~~~~~~~~~~~~~l~fpllsD~~~~v~~~ 112 (194)
T d1uula_ 33 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKS 112 (194)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEEeCCccccchhhhhHHHhhhhhhccCceEEEEEecCchhhhhhhhhhhhhhccccCCCcceeeCCcchHHHH
Confidence 467888999 99999999999999999999988888888888652 3478999
Q ss_pred cCccc-----cCCcEEEE-cCCcccccc----CCCCCHHHHHHHHHh
Q psy12972 924 LGVGS-----QLPQIALL-TDGRTSFFK----EPSFSVQKMVEFFRL 960 (1578)
Q Consensus 924 ~gV~~-----~~PTl~lf-~~G~~~~y~----~G~~s~~~L~~fi~~ 960 (1578)
|||-. .+|+..++ ++|.+...+ .-.++.+++...++.
T Consensus 113 ygv~~~~~~~~~R~tfvID~~G~I~~~~~~~~~~~r~~~E~Lr~l~a 159 (194)
T d1uula_ 113 YGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKA 159 (194)
T ss_dssp HTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred cCCeeccCCceEEEEEEECCCCeEEEEEEecCCCCcCHHHHHHHHHH
Confidence 98831 14544444 667653221 224678888888854
|
| >d2cvba1 c.47.1.10 (A:2-188) Probable thiol-disulfide isomerase/thioredoxin TTHA0593 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Probable thiol-disulfide isomerase/thioredoxin TTHA0593 species: Thermus thermophilus [TaxId: 274]
Probab=94.86 E-value=0.0049 Score=64.12 Aligned_cols=39 Identities=13% Similarity=0.107 Sum_probs=33.1
Q ss_pred cCccceeccccccccccccchHHHHHHHHHhcCCCcceee
Q psy12972 764 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFT 803 (1578)
Q Consensus 764 ~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~ 803 (1578)
.+++++|.|+|+||++|++..|...++++++++. +.++.
T Consensus 31 kGk~vvl~FwatwCp~C~~~~p~l~~l~~~y~~~-v~~v~ 69 (187)
T d2cvba1 31 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVG 69 (187)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEE
T ss_pred CCCeEEEEEeCCCCccchhhhhhhhhhhhhcccc-ceeee
Confidence 3578899999999999999999999999999864 44433
|
| >d1z6ma1 c.47.1.13 (A:1-172) Hypothetical protein EF0770 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: DsbA-like domain: Hypothetical protein EF0770 species: Enterococcus faecalis [TaxId: 1351]
Probab=94.71 E-value=0.018 Score=58.13 Aligned_cols=83 Identities=13% Similarity=0.125 Sum_probs=59.5
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCc-eEEEEEECcc----------------------------------
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG-VGFFTVHVHN---------------------------------- 916 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~-v~~a~VDc~~---------------------------------- 916 (1578)
..+..++.|+...|+||+++.|...++.+.+...+ +.+..+....
T Consensus 23 ~a~v~I~ef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (172)
T d1z6ma1 23 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFDKEKESLQRGNVMHHYIDYSAPEQALSALHKMFATQ 102 (172)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECCCCSTTTHHHHHHHTTCCTTCHHHHHHHHHHHHHTH
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHhhhhhhhccccceeeeeccccccchhhHHHHHHHHHHHHccchhHHHHHHHHHHhc
Confidence 34567999999999999999999999988764322 4444333110
Q ss_pred --------------------------------chhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHHHHHHh
Q psy12972 917 --------------------------------EQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRL 960 (1578)
Q Consensus 917 --------------------------------~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~ 960 (1578)
..+.++++||++ .||+++ ||+. ..|..+.+++.++|.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~a~~~gI~g-TPt~~I--ng~~---~~g~~~~~~~~~~id~ 172 (172)
T d1z6ma1 103 DEWGNLTLEEVATYAEKNLGLKEQKDATLVSAVIAEANAAHIQF-VPTIII--GEYI---FDESVTEEELRGYIEK 172 (172)
T ss_dssp HHHTTSCHHHHHHHHHHTSCCCCCCCHHHHHHHHHHHHHHTCCS-SCEEEE--TTEE---ECTTCCHHHHHHHHTC
T ss_pred cccchHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHcCCCc-CCEEEE--CCEE---ecCCCCHHHHHHHHcC
Confidence 113456689998 999876 7764 3588999999988853
|
| >d1jfua_ c.47.1.10 (A:) Membrane-anchored thioredoxin-like protein TlpA, soluble domain {Bradyrhizobium japonicum [TaxId: 375]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Membrane-anchored thioredoxin-like protein TlpA, soluble domain species: Bradyrhizobium japonicum [TaxId: 375]
Probab=94.67 E-value=0.0051 Score=63.10 Aligned_cols=43 Identities=19% Similarity=0.473 Sum_probs=36.7
Q ss_pred cCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeee
Q psy12972 764 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHY 806 (1578)
Q Consensus 764 ~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~ 806 (1578)
.++++++.|+++||++|+...|...++++.+++.++.++.+..
T Consensus 55 kGK~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~vv~vs~ 97 (176)
T d1jfua_ 55 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINI 97 (176)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEEC
T ss_pred CCCEEEEEeccCcccchHHHHHhhhhccccccccccccccccc
Confidence 4578999999999999999999999999999888666655543
|
| >d1beda_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA) {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: DsbA-like domain: Disulfide-bond formation facilitator (DsbA) species: Vibrio cholerae [TaxId: 666]
Probab=94.49 E-value=0.027 Score=57.04 Aligned_cols=40 Identities=28% Similarity=0.472 Sum_probs=32.5
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEE
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTV 912 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~V 912 (1578)
..++.+|+|....|+||+++.+.+.++.+.+... +.+...
T Consensus 17 ~~~~~Ivef~d~~Cp~C~~~~~~~~~l~~~~~~~-~~~~~~ 56 (181)
T d1beda_ 17 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEG-AKFQKN 56 (181)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTT-CEEEEE
T ss_pred CCCCEEEEEECCCCccchhhhhhhhhHhhhcccc-cceeEE
Confidence 4678999999999999999999999988887654 444443
|
| >d2f8aa1 c.47.1.10 (A:12-195) Glutathione peroxidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Glutathione peroxidase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.44 E-value=0.027 Score=58.08 Aligned_cols=44 Identities=14% Similarity=0.074 Sum_probs=40.1
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN 916 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~ 916 (1578)
.+++||.++|+|||.|.+-.|.++++.+++++.|+.+..+-|+.
T Consensus 24 GKvvLivN~AS~Cg~t~~~y~~L~~L~~ky~~~g~~Il~fP~nq 67 (184)
T d2f8aa1 24 GKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQ 67 (184)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred CCEEEEEEecccCCcchhhhHHHHHhhhhhcccceeEEEeeccc
Confidence 68899999999999999888999999999998888999998864
|
| >d1a8ya2 c.47.1.3 (A:127-228) Calsequestrin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Calsequestrin domain: Calsequestrin species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=94.43 E-value=0.061 Score=49.89 Aligned_cols=80 Identities=19% Similarity=0.269 Sum_probs=60.8
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCC-ccccccCC-CCC
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDG-RTSFFKEP-SFS 950 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G-~~~~y~~G-~~s 950 (1578)
+..++|.|+.+--+. ....|.++|..+.+. +.||. +.++++++++||+ .|+|++|++- .....+.| ..+
T Consensus 18 d~v~VvGfF~~~~~~---~~~~F~~~A~~~rd~-~~F~~---t~d~~va~~~~v~--~~~vvlfr~fde~~~~~~~~~~t 88 (102)
T d1a8ya2 18 DEIKLIGYFKNKDSE---HYKAFKEAAEEFHPY-IPFFA---TFDSKVAKKLTLK--LNEIDFYEAFMEEPVTIPDKPNS 88 (102)
T ss_dssp SSCEEEEECSSTTCH---HHHHHHHHHHHHTTT-SCEEE---ECCHHHHHHHCCC--TTCEEEECTTCSSEEECSSSSCC
T ss_pred CCEEEEEEECCCCcH---HHHHHHHHHHHcCCC-ceEEE---ECCHHHHHHcCCC--CCCEEEeeecCCCceecCCCCCC
Confidence 568899999764333 456899999999765 78886 4668999999996 5999999763 22333446 488
Q ss_pred HHHHHHHHHhh
Q psy12972 951 VQKMVEFFRLK 961 (1578)
Q Consensus 951 ~~~L~~fi~~~ 961 (1578)
.++|.+|++.+
T Consensus 89 ~~~i~~Fi~~n 99 (102)
T d1a8ya2 89 EEEIVNFVEEH 99 (102)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999999865
|
| >d1we0a1 c.47.1.10 (A:1-166) Alkyl hydroperoxide reductase AhpC {Amphibacillus xylanus [TaxId: 1449]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Alkyl hydroperoxide reductase AhpC species: Amphibacillus xylanus [TaxId: 1449]
Probab=94.32 E-value=0.05 Score=55.01 Aligned_cols=44 Identities=25% Similarity=0.455 Sum_probs=37.5
Q ss_pred CCcEEEEEEcC-CCcccccccHHHHHHHHHhCCCceEEEEEECcc
Q psy12972 873 TTPHLILFYSD-WCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN 916 (1578)
Q Consensus 873 ~~~~LV~Fyap-wCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~ 916 (1578)
.+++++.||.. ||+.|..-.+.+.+..++++..++.+..|.++.
T Consensus 31 GK~vvl~F~p~~~~p~C~~e~~~~~~~~~~f~~~g~~vv~IS~D~ 75 (166)
T d1we0a1 31 GKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDT 75 (166)
T ss_dssp SSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred CCeEEEEEecccCCcHHHHHHHHHHHHHHhhcccceEEEeccccc
Confidence 46788889954 999999999999999999988788888887753
|
| >d2a4va1 c.47.1.10 (A:59-214) Peroxiredoxin dot5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Peroxiredoxin dot5 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.30 E-value=0.031 Score=55.94 Aligned_cols=73 Identities=15% Similarity=0.240 Sum_probs=48.9
Q ss_pred CCcEEEEEE-cCCCcccccccHHHHHHHHHhCCCceEEEEEECc---------------------cchhhHhHcCccccC
Q psy12972 873 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH---------------------NEQGLARRLGVGSQL 930 (1578)
Q Consensus 873 ~~~~LV~Fy-apwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~---------------------~~~~L~~k~gV~~~~ 930 (1578)
++.+++.|| +.||+.|..-.+.+.+...+++.. +.+..|..+ .+.+++++||+.. .
T Consensus 33 ~~~vvlff~p~~~cp~C~~~~~~~~~~~~~~~~~-~~~~~is~d~~~~~~~f~~~~~l~f~~L~D~~~~v~~~ygv~~-~ 110 (156)
T d2a4va1 33 NRVVVFFVYPRASTPGSTRQASGFRDNYQELKEY-AAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKK-T 110 (156)
T ss_dssp CSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTT-CEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBS-S
T ss_pred ccEEEEEecccccCcchhhhhHHHHHHHHHHhhc-cceeeeccchhhhHHhhhcccCccceeccchHHHHHHHcCCCc-c
Confidence 344555556 889999999999999999999765 445556543 2346777887764 5
Q ss_pred C------cEEEEcCCccccccCC
Q psy12972 931 P------QIALLTDGRTSFFKEP 947 (1578)
Q Consensus 931 P------Tl~lf~~G~~~~y~~G 947 (1578)
| +.++..+|+....+.+
T Consensus 111 ~~~~~~r~~~i~~dg~i~~~~~~ 133 (156)
T d2a4va1 111 PLSGSIRSHFIFVDGKLKFKRVK 133 (156)
T ss_dssp SSSCBCCEEEEEETTEEEEEEES
T ss_pred ccCCeeEEEEEEECCeEEEEEEE
Confidence 5 3445567776544433
|
| >d1v58a1 c.47.1.9 (A:62-230) Thiol:disulfide interchange protein DsbG, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: DsbC/DsbG C-terminal domain-like domain: Thiol:disulfide interchange protein DsbG, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=93.95 E-value=0.033 Score=56.51 Aligned_cols=80 Identities=18% Similarity=0.163 Sum_probs=55.3
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc-------------------------------------
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH------------------------------------- 915 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~------------------------------------- 915 (1578)
.+..++.|+.+.|++|+++.+..+++.+..+ +.+..++..
T Consensus 36 a~~tv~vF~D~~CP~C~~~~~~l~~l~~~~~---v~v~~~~~~~~~~~s~~~a~a~~~a~~~~~~~~~~~~~~~~~~~~~ 112 (169)
T d1v58a1 36 APVIVYVFADPFCPYCKQFWQQARPWVDSGK---VQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNV 112 (169)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHTTS---EEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCC
T ss_pred CCEEEEEEECCCCcchHHHHHHHHHHHhccc---eeEEEEecccCCcchHHHHHHHHhhhCHHHHHHHHHHhhhcccccc
Confidence 4567899999999999999998888765432 666655521
Q ss_pred -------------cchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHHH
Q psy12972 916 -------------NEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVE 956 (1578)
Q Consensus 916 -------------~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~ 956 (1578)
.+.++++++||+| .||+++...+.......|..+.+.|..
T Consensus 113 ~~~~~~~~~~~i~~n~~~a~~~gi~g-TPt~i~~~~~g~~~~~~G~~~~~~l~~ 165 (169)
T d1v58a1 113 PANVSTEQMKVLSDNEKLMDDLGANV-TPAIYYMSKENTLQQAVGLPDQKTLNI 165 (169)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHTCCS-SCEEEEEETTTEEEEEESSCCHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHhcCCCC-CCEEEEECCCCCEEEecCCCCHHHHHH
Confidence 1235788899998 999887643323333457777666554
|
| >d1a8la1 c.47.1.2 (A:1-119) Protein disulfide isomerase, PDI {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: PDI-like domain: Protein disulfide isomerase, PDI species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=93.95 E-value=0.027 Score=53.80 Aligned_cols=85 Identities=16% Similarity=0.323 Sum_probs=61.1
Q ss_pred CCcEEEEEEc--CCCcccccccHHHHHHHHHhCCCceEEEEEECc--cchhhHhHcCccccCCcEEEEcCCcc--ccccC
Q psy12972 873 TTPHLILFYS--DWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH--NEQGLARRLGVGSQLPQIALLTDGRT--SFFKE 946 (1578)
Q Consensus 873 ~~~~LV~Fya--pwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~--~~~~L~~k~gV~~~~PTl~lf~~G~~--~~y~~ 946 (1578)
.+|+-+.+|. +.|..|..+....+++|..- ++ +.+-..|.+ ++++++++|+|.. .||+.++.+|+. +.|+
T Consensus 21 ~~pV~l~~~~~~~~~~~~~e~~~ll~ela~lS-dk-i~~~~~~~~~~e~~~~~~~~~ver-~Ps~~i~~~g~~~gIrF~- 96 (119)
T d1a8la1 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSELT-DK-LSYEIVDFDTPEGKELAKRYRIDR-APATTITQDGKDFGVRYF- 96 (119)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTTC-TT-EEEEEEETTSHHHHHHHHHTTCCS-SSEEEEEETTBCCSEEEE-
T ss_pred CCCEEEEEEecCCCchhHHHHHHHHHHHHhhC-CC-eEEEEeccCcchhhhHHHhhcccc-CceEEEecCCcccceEEE-
Confidence 4555555554 56999999998888887654 33 677666655 4578999999997 999999988764 3444
Q ss_pred CCCCHHHHHHHHHhh
Q psy12972 947 PSFSVQKMVEFFRLK 961 (1578)
Q Consensus 947 G~~s~~~L~~fi~~~ 961 (1578)
|.-.-.++..||...
T Consensus 97 GiP~GhEf~SlilaI 111 (119)
T d1a8la1 97 GLPAGHEFAAFLEDI 111 (119)
T ss_dssp SCCCTTHHHHHHHHH
T ss_pred eccCchhHHHHHHHH
Confidence 766667777777543
|
| >d1zofa1 c.47.1.10 (A:1-170) Thioredoxin reductase TsaA {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Thioredoxin reductase TsaA species: Helicobacter pylori [TaxId: 210]
Probab=93.90 E-value=0.038 Score=56.14 Aligned_cols=87 Identities=15% Similarity=0.318 Sum_probs=60.4
Q ss_pred CCcEEEEEE-cCCCcccccccHHHHHHHHHhCCCceEEEEEECcc----------------------------chhhHhH
Q psy12972 873 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------------EQGLARR 923 (1578)
Q Consensus 873 ~~~~LV~Fy-apwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~----------------------------~~~L~~k 923 (1578)
++++++.|| +.||+.|..-.+.+.+...++++.++.+..|..+. +.++++.
T Consensus 33 k~~vvl~FyP~~~tp~C~~e~~~~~~~~~~f~~~g~~Vvgis~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~v~~~ 112 (170)
T d1zofa1 33 KNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRD 112 (170)
T ss_dssp SSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHHH
T ss_pred CCEEEEEEEccccCCcCHHHHHHHHHhHHhhccCCeeEecccccchhhHHHHHhhhhhcccccCcccccccccccHHHHH
Confidence 567888899 99999999999999999999988888888887643 2367788
Q ss_pred cCccc----cCCcEEEE-cCCcccc--ccC--CCCCHHHHHHHHH
Q psy12972 924 LGVGS----QLPQIALL-TDGRTSF--FKE--PSFSVQKMVEFFR 959 (1578)
Q Consensus 924 ~gV~~----~~PTl~lf-~~G~~~~--y~~--G~~s~~~L~~fi~ 959 (1578)
||+.. ..|+..++ ++|.+.. ... -.++.+++.+.++
T Consensus 113 ygv~~~~~~~~r~tfvID~~G~I~~~~~~~~~~~~~~~eiL~~l~ 157 (170)
T d1zofa1 113 YDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVD 157 (170)
T ss_dssp TTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHH
T ss_pred cCCCccccceeEEEEEEcCCCeEEEEEEeCCCCCCCHHHHHHHHH
Confidence 88731 13444444 6776531 111 1356677776664
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.66 E-value=0.075 Score=58.92 Aligned_cols=29 Identities=14% Similarity=0.021 Sum_probs=21.3
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecch
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYID 438 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~ 438 (1578)
++|.+|..-+.|+-+..+|+ -++||.+++
T Consensus 24 ~~i~~G~~N~ny~v~t~~g~-yVLri~~~~ 52 (316)
T d2ppqa1 24 KGIAEGVENSNFLLHTTKDP-LILTLYEKR 52 (316)
T ss_dssp EEECC---EEEEEEEESSCC-EEEEEECC-
T ss_pred ecCCCCcccCeEEEEECCCc-EEEEEcCCC
Confidence 78999999999999887775 799998765
|
| >d2zcta1 c.47.1.10 (A:6-242) Peroxiredoxin {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Peroxiredoxin species: Aeropyrum pernix [TaxId: 56636]
Probab=93.64 E-value=0.056 Score=57.86 Aligned_cols=87 Identities=17% Similarity=0.311 Sum_probs=64.8
Q ss_pred CCcEEEEEE-cCCCcccccccHHHHHHHHHhCCCceEEEEEECc---------------------------cchhhHhHc
Q psy12972 873 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH---------------------------NEQGLARRL 924 (1578)
Q Consensus 873 ~~~~LV~Fy-apwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~---------------------------~~~~L~~k~ 924 (1578)
.+.+++.|| ++||+.|..-.+.+.+...+++..|+.+..|.++ .+.++++.|
T Consensus 29 Gk~vVLff~P~dftpvCttEl~~~~~~~~ef~~~g~~vigiS~Ds~~sh~~w~~~~~~~~~~~l~fpllsD~~~~vak~y 108 (237)
T d2zcta1 29 GKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRL 108 (237)
T ss_dssp TCEEEEEEESCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHCCCCCSCEEECGGGHHHHHT
T ss_pred CCEEEEEEECCCCCccCHHHHHHHHhhhhhhccCCcceeeccCCcHHHHHHHhhhhhhhcccccccccccCcchHHHHHc
Confidence 556777788 9999999999999999999998888888887764 234689999
Q ss_pred Cc-------cccCCcEEEE-cCCcccc--cc--CCCCCHHHHHHHHHh
Q psy12972 925 GV-------GSQLPQIALL-TDGRTSF--FK--EPSFSVQKMVEFFRL 960 (1578)
Q Consensus 925 gV-------~~~~PTl~lf-~~G~~~~--y~--~G~~s~~~L~~fi~~ 960 (1578)
|+ .. .|+..++ ++|.+.. ++ .-.|+.++|+..|..
T Consensus 109 Gv~~~~~~~~~-~RatFIIDpdG~Ir~~~~~~~~~gR~~dEiLr~l~a 155 (237)
T d2zcta1 109 GLLHAESATHT-VRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKA 155 (237)
T ss_dssp TCC----CCTT-CCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHH
T ss_pred CCccccccccc-eeeeEEECCCCEEEEEEEeCCCCCCCHHHHHHHHHH
Confidence 98 23 5777666 6676431 11 124788999988853
|
| >d1iloa_ c.47.1.1 (A:) MTH985, a thioredoxin {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: MTH985, a thioredoxin species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=93.60 E-value=0.077 Score=46.44 Aligned_cols=72 Identities=21% Similarity=0.395 Sum_probs=54.7
Q ss_pred EEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCC-CCHHHHHH
Q psy12972 878 ILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPS-FSVQKMVE 956 (1578)
Q Consensus 878 V~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~-~s~~~L~~ 956 (1578)
|..+.+.|..|.++...-+++++++ +....+.+| +.-.++. +|||-+ .|++++ ||+... . |. .+.++|.+
T Consensus 4 IkVlg~gC~~C~~~~~~v~~a~~e~-gi~a~v~kv--~d~~ei~-~ygVms-tPalvI--dg~vv~-~-G~vPs~~ei~~ 74 (77)
T d1iloa_ 4 IQIYGTGCANCQMLEKNAREAVKEL-GIDAEFEKI--KEMDQIL-EAGLTA-LPGLAV--DGELKI-M-GRVASKEEIKK 74 (77)
T ss_dssp EEEECSSSSTTHHHHHHHHHHHHHT-TCCEEEEEE--CSHHHHH-HHTCSS-SSCEEE--TTEEEE-C-SSCCCHHHHHH
T ss_pred EEEeCCCCccHHHHHHHHHHHHHHc-CCceEEEEe--CCHHHHH-HcCCcC-CCEEEE--CCEEEE-E-ecCCCHHHHHH
Confidence 4566899999999999999999887 444666555 5556676 699997 999876 776544 2 53 48899988
Q ss_pred HH
Q psy12972 957 FF 958 (1578)
Q Consensus 957 fi 958 (1578)
|+
T Consensus 75 ~L 76 (77)
T d1iloa_ 75 IL 76 (77)
T ss_dssp HC
T ss_pred Hh
Confidence 85
|
| >d2h01a1 c.47.1.10 (A:2-171) Thioredoxin peroxidase 2 (thioredoxin peroxidase B, 2-cys peroxiredoxin) {Plasmodium yoelii [TaxId: 5861]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Thioredoxin peroxidase 2 (thioredoxin peroxidase B, 2-cys peroxiredoxin) species: Plasmodium yoelii [TaxId: 5861]
Probab=92.77 E-value=0.093 Score=53.17 Aligned_cols=88 Identities=20% Similarity=0.327 Sum_probs=62.1
Q ss_pred CCcEEEEEE-cCCCcccccccHHHHHHHHHhCCCceEEEEEECcc----------------------------chhhHhH
Q psy12972 873 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------------EQGLARR 923 (1578)
Q Consensus 873 ~~~~LV~Fy-apwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~----------------------------~~~L~~k 923 (1578)
+++++|.|| +.||+.|..-.+.|.+...+++..++.+..|.++. +..+++.
T Consensus 27 ~k~vVl~FyP~~~tp~Ct~e~~~f~~~~~~f~~~g~~vigIS~D~~~~~~~~~~~~~~~~~~~~~~f~llsD~~~~~~~~ 106 (170)
T d2h01a1 27 KKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIARS 106 (170)
T ss_dssp TCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCccchhhHHHhhhhhhhhcCCeeEecccCCcHHHHHhHhhhhhhhccccccCCceeEcCccHHHHH
Confidence 467888999 89999999999999999999988888898888763 2367788
Q ss_pred cCccc----cCCcEEEE-cCCcccccc----CCCCCHHHHHHHHHh
Q psy12972 924 LGVGS----QLPQIALL-TDGRTSFFK----EPSFSVQKMVEFFRL 960 (1578)
Q Consensus 924 ~gV~~----~~PTl~lf-~~G~~~~y~----~G~~s~~~L~~fi~~ 960 (1578)
|||.. ..++..++ ++|.....+ .-.++.+++.+.|+.
T Consensus 107 ygv~~~~~~~~R~tfiId~~G~I~~~~~~~~~~~~~~~eil~~l~~ 152 (170)
T d2h01a1 107 YDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDA 152 (170)
T ss_dssp TTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHH
T ss_pred hCCccccccceeeeEEEcCCCeEEEEEEecCCCCCCHHHHHHHHHH
Confidence 88732 02444444 666643221 123466777777753
|
| >d2dlxa1 c.47.1.24 (A:1-147) UBX domain-containing protein 7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: UAS domain domain: UBX domain-containing protein 7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.40 E-value=0.012 Score=58.74 Aligned_cols=23 Identities=17% Similarity=0.067 Sum_probs=20.7
Q ss_pred ccCccceeccccccccccccchH
Q psy12972 763 SYTTPHLILFYSDWCFACLQVEP 785 (1578)
Q Consensus 763 ~~~~~~lV~FYApwCghCk~LaP 785 (1578)
..++++||.||++||+.|+.|..
T Consensus 40 ~~~K~llV~~~~~~C~~C~~m~~ 62 (147)
T d2dlxa1 40 MQNKWLMINIQNVQDFACQCLNR 62 (147)
T ss_dssp HHTCEEEEEEECSCTTTHHHHHH
T ss_pred HcCCcEEEEEecCCCCchHHHHH
Confidence 46789999999999999999876
|
| >d1wjka_ c.47.1.1 (A:) Thioredoxin-like structure containing protein C330018D20Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Thioredoxin-like structure containing protein C330018D20Rik species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.13 E-value=0.0073 Score=56.19 Aligned_cols=35 Identities=20% Similarity=0.364 Sum_probs=28.4
Q ss_pred CCccCccceeccccccccccccchHHHHHHHHHhc
Q psy12972 761 PKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELS 795 (1578)
Q Consensus 761 ~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk 795 (1578)
.+++.-+.++.|++|||++|+++.|.+++++..+.
T Consensus 11 ~~~~~~p~i~lft~~~C~~C~~a~~~L~~~~~~~~ 45 (100)
T d1wjka_ 11 ASNRALPVLTLFTKAPCPLCDEAKEVLQPYKDRFI 45 (100)
T ss_dssp CSCCCCCEEEEEECSSCHHHHHHHHHTSTTSSSSE
T ss_pred hcCCCCCEEEEEECCCCCChHHHHHHHHHhhhhcc
Confidence 34567788999999999999999988888765543
|
| >d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Glutaredoxin-like NRDH-redoxin species: Corynebacterium ammoniagenes [TaxId: 1697]
Probab=92.05 E-value=0.093 Score=45.33 Aligned_cols=66 Identities=18% Similarity=0.422 Sum_probs=45.0
Q ss_pred EEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchh---hHhHcCccccCCcEEEEcCCccccccCCCCCHHH
Q psy12972 877 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQG---LARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQK 953 (1578)
Q Consensus 877 LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~---L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~ 953 (1578)
++.|..+||++|.+....+++ .++.+-.+|.+.+++ ..+..|..+ +|++. .+|+.+ |..+.+.
T Consensus 3 v~iYt~~~C~~C~~ak~~L~~-------~~i~~~~~~i~~~~~~~~~~~~~g~~t-vP~i~--i~g~~i----gGf~~d~ 68 (74)
T d1r7ha_ 3 ITLYTKPACVQCTATKKALDR-------AGLAYNTVDISLDDEARDYVMALGYVQ-APVVE--VDGEHW----SGFRPER 68 (74)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETTTCHHHHHHHHHTTCBC-CCEEE--ETTEEE----ESCCHHH
T ss_pred EEEEeCCCChhHHHHHHHHHH-------cCCceEEEEccCCHHHHHHHHHhCCCC-cCEEE--ECCEEE----eCCCHhH
Confidence 567889999999876544433 357888888887654 446678887 99764 466543 3355666
Q ss_pred HHH
Q psy12972 954 MVE 956 (1578)
Q Consensus 954 L~~ 956 (1578)
|.+
T Consensus 69 l~~ 71 (74)
T d1r7ha_ 69 IKQ 71 (74)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
|
| >d1ttza_ c.47.1.1 (A:) Hypothetical protein XCC2852 {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Hypothetical protein XCC2852 species: Xanthomonas campestris [TaxId: 339]
Probab=91.96 E-value=0.14 Score=44.51 Aligned_cols=72 Identities=18% Similarity=0.353 Sum_probs=51.4
Q ss_pred EEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHHH
Q psy12972 877 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVE 956 (1578)
Q Consensus 877 LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~ 956 (1578)
+..|..++|.-|......+ .+. .++.+-.||++.++++.++|+.. .|.|. .+|..... ..++.++|.+
T Consensus 2 ltLyt~~~C~LCe~A~~~l---~~~---~~~~~~~vdI~~d~~l~~~y~~~--IPVl~--~~~~~~l~--w~fd~~~l~~ 69 (75)
T d1ttza_ 2 LTLYQRDDCHLCDQAVEAL---AQA---RAGAFFSVFIDDDAALESAYGLR--VPVLR--DPMGRELD--WPFDAPRLRA 69 (75)
T ss_dssp EEEEECSSCHHHHHHHHHH---HHT---TCCCEEEEECTTCHHHHHHHTTT--CSEEE--CTTCCEEE--SCCCHHHHHH
T ss_pred EEEECCCCccHHHHHHHHH---Hhc---cCCcEEEEEccCCHHHHHHhCCe--eeEEE--ECCeeEEc--CccCHHHHHH
Confidence 5678899999997653322 221 23788999999999999999984 79654 34433322 3578999999
Q ss_pred HHHh
Q psy12972 957 FFRL 960 (1578)
Q Consensus 957 fi~~ 960 (1578)
|+..
T Consensus 70 ~L~~ 73 (75)
T d1ttza_ 70 WLDA 73 (75)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9863
|
| >d1egoa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Glutaredoxin (Grx, thioltransferase) species: Escherichia coli [TaxId: 562]
Probab=91.60 E-value=0.069 Score=47.61 Aligned_cols=74 Identities=19% Similarity=0.390 Sum_probs=51.6
Q ss_pred EEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccch----hhHhHc--CccccCCcEEEEcCCccccccCCCCC
Q psy12972 877 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQ----GLARRL--GVGSQLPQIALLTDGRTSFFKEPSFS 950 (1578)
Q Consensus 877 LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~----~L~~k~--gV~~~~PTl~lf~~G~~~~y~~G~~s 950 (1578)
+|.|..++|++|.+....+++....+++ +.+..+|.+.++ .+.+.. ++++ +|.| |.+|+.+ |..
T Consensus 3 vviysk~~Cp~C~~aK~ll~~~~~~~~~--i~~~~~~~~~~~~~~~~~~~~~~~~~~t-vPqI--fi~g~~I----GG~- 72 (85)
T d1egoa_ 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD--FQYQYVDIRAEGITKEDLQQKAGKPVET-VPQI--FVDQQHI----GGY- 72 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS--CEEEEECHHHHTCCSHHHHHHTCCCSCC-SCEE--EETTEEE----ESS-
T ss_pred EEEEeCCCCHhHHHHHHHHHHcCCCCCC--ceEEEEecCCCHHHHHHHHHHhcCCCCC-CCEE--EECCEEE----ECH-
Confidence 5778999999999999999999888875 677777775543 333332 3455 8975 4477543 333
Q ss_pred HHHHHHHHHhh
Q psy12972 951 VQKMVEFFRLK 961 (1578)
Q Consensus 951 ~~~L~~fi~~~ 961 (1578)
+++.+++++.
T Consensus 73 -~el~~~~~~~ 82 (85)
T d1egoa_ 73 -TDFAAWVKEN 82 (85)
T ss_dssp -HHHHHHHHHH
T ss_pred -HHHHHHHHhc
Confidence 4788887654
|
| >d1zyea1 c.47.1.10 (A:6-163) Peroxiredoxin-3 (AOP-1, SP-22) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Peroxiredoxin-3 (AOP-1, SP-22) species: Cow (Bos taurus) [TaxId: 9913]
Probab=91.29 E-value=0.21 Score=49.81 Aligned_cols=87 Identities=18% Similarity=0.345 Sum_probs=60.0
Q ss_pred CCcEEEEEE-cCCCcccccccHHHHHHHHHhCCCceEEEEEECcc----------------------------chhhHhH
Q psy12972 873 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------------EQGLARR 923 (1578)
Q Consensus 873 ~~~~LV~Fy-apwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~----------------------------~~~L~~k 923 (1578)
.+++++.|| +.||+.|..-.+.+.+...++...++.+..|..+. +..+++.
T Consensus 26 Gk~vVL~Fyp~~~tp~C~~e~~~~~~~~~~~~~~~~~vigIS~d~~~~~~~~~~~~~~~~~~~~~~f~llsD~~~~~~~~ 105 (158)
T d1zyea1 26 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRD 105 (158)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEeehhcCCccccchhhHHHhHHHhhcCCceEEeccCcCHHHHHHHHhhhHhhccccccccccccccccHHHHH
Confidence 467899999 89999999999999999999987777777666532 2357788
Q ss_pred cCcccc-----CCcEEEE-cCCcccccc----CCCCCHHHHHHHHH
Q psy12972 924 LGVGSQ-----LPQIALL-TDGRTSFFK----EPSFSVQKMVEFFR 959 (1578)
Q Consensus 924 ~gV~~~-----~PTl~lf-~~G~~~~y~----~G~~s~~~L~~fi~ 959 (1578)
||+... .|+..++ ++|.+.... .-.++.+++.+.++
T Consensus 106 ygv~~~~~g~~~R~tfvID~~G~I~~~~i~~~~~~~~~~EiL~~lk 151 (158)
T d1zyea1 106 YGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVK 151 (158)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHH
T ss_pred HHhccccCCccccEEEEECCCCEEEEEEEeCCCCCCCHHHHHHHHH
Confidence 887631 2333444 677653211 12356777877775
|
| >d1xvwa1 c.47.1.10 (A:1-153) Putative peroxiredoxin Rv2238c/MT2298 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Putative peroxiredoxin Rv2238c/MT2298 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=90.82 E-value=0.23 Score=48.84 Aligned_cols=44 Identities=11% Similarity=0.191 Sum_probs=35.2
Q ss_pred CCcEEEEEE-cCCCcccccccHHHHHHHHHhCCCceEEEEEECcc
Q psy12972 873 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN 916 (1578)
Q Consensus 873 ~~~~LV~Fy-apwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~ 916 (1578)
++++++.|| +.||+.|..-.+.+.+..+++.+.++.+..|..+.
T Consensus 29 ~~~vvl~~~~~~~cp~C~~e~~~l~~~~~~~~~~~~~vi~vs~d~ 73 (153)
T d1xvwa1 29 AKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGP 73 (153)
T ss_dssp TCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCC
T ss_pred CCcEEEEecccccccchhhhhhhhhhhhhhhcccccccccccchh
Confidence 345555555 89999999999999999999988888888887653
|
| >d1e2ya_ c.47.1.10 (A:) Tryparedoxin peroxidase (thioredoxin peroxidase homologue) {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Tryparedoxin peroxidase (thioredoxin peroxidase homologue) species: Crithidia fasciculata [TaxId: 5656]
Probab=89.70 E-value=0.07 Score=53.77 Aligned_cols=43 Identities=16% Similarity=0.345 Sum_probs=36.2
Q ss_pred Cccceeccc-cccccccccchHHHHHHHHHhcCCCcceeeeeec
Q psy12972 765 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYD 807 (1578)
Q Consensus 765 ~~~~lV~FY-ApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~ 807 (1578)
++++++.|| +.||++|..-.|.+.+.++++++.++.++.+..+
T Consensus 33 GK~vVl~F~p~~~c~~C~~e~~~l~~~~~~~~~~~~~v~~is~d 76 (167)
T d1e2ya_ 33 GKYVVLFFYPMDFTFVCPTEIIQFSDDAKRFAEINTEVISCSCD 76 (167)
T ss_dssp TSEEEEEECSCSSCSSCCHHHHHHHHTHHHHHTTTEEEEEEESS
T ss_pred CCeEEEEEcccccccccchhhHHHHHHHHHhhcCceEEEeecCC
Confidence 467889998 9999999999999999999999887666555443
|
| >d1n8ja_ c.47.1.10 (A:) Alkyl hydroperoxide reductase AhpC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Alkyl hydroperoxide reductase AhpC species: Salmonella typhimurium [TaxId: 90371]
Probab=89.56 E-value=0.36 Score=49.42 Aligned_cols=88 Identities=15% Similarity=0.206 Sum_probs=60.9
Q ss_pred CCcEEEEEE-cCCCcccccccHHHHHHHHHhCCCceEEEEEECcc-------------------------chhhHhHcCc
Q psy12972 873 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-------------------------EQGLARRLGV 926 (1578)
Q Consensus 873 ~~~~LV~Fy-apwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~-------------------------~~~L~~k~gV 926 (1578)
.+.+++.|| ++||+.|..-.+.+.+...+++..++.+..|.++. +.+++++|||
T Consensus 30 Gk~vVL~FyP~~~tp~C~~e~~~f~~~~~~f~~~~~~v~gIS~Ds~~sh~~f~~~~~~~~~~~fpllsD~~~~v~~~yGv 109 (186)
T d1n8ja_ 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDN 109 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTTC
T ss_pred CCeEEEEEEeccCCCccHHHHHHHHHhhhhcccccEEEEeccccCHHHHHHHhccccccccccccccccHHHHHHHHhCC
Confidence 467888899 88999999999999999999987777777777643 3357778877
Q ss_pred c----c-cCCcEEEE-cCCccccc--c--CCCCCHHHHHHHHHh
Q psy12972 927 G----S-QLPQIALL-TDGRTSFF--K--EPSFSVQKMVEFFRL 960 (1578)
Q Consensus 927 ~----~-~~PTl~lf-~~G~~~~y--~--~G~~s~~~L~~fi~~ 960 (1578)
. + ..|+.+++ ++|.+... + .-.++.+++...++.
T Consensus 110 ~~~~~g~~~r~tfiID~~G~Ir~~~v~~~~~~r~~~eiL~~lka 153 (186)
T d1n8ja_ 110 MREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKA 153 (186)
T ss_dssp EETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred CcccCCcceeeEEEECchheEEEEeecCCCcccCHHHHHHHHHH
Confidence 4 1 12444444 56664211 1 124678888877764
|
| >d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Glutaredoxin-like NRDH-redoxin species: Escherichia coli [TaxId: 562]
Probab=89.42 E-value=0.13 Score=44.64 Aligned_cols=64 Identities=17% Similarity=0.347 Sum_probs=43.4
Q ss_pred EEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhH---hHcCccccCCcEEEEcCCccccccCCCCCHHH
Q psy12972 877 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLA---RRLGVGSQLPQIALLTDGRTSFFKEPSFSVQK 953 (1578)
Q Consensus 877 LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~---~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~ 953 (1578)
++.|..+||++|.+....+++ .++.+-.+|.+.+++.. +..|.++ +|++++ +|+.+ |..+++.
T Consensus 3 i~iYs~~~C~~C~~ak~~L~~-------~~i~y~~~~i~~~~~~~~~~~~~g~~t-vP~i~i--~~~~i----~Gf~~d~ 68 (76)
T d1h75a_ 3 ITIYTRNDCVQCHATKRAMEN-------RGFDFEMINVDRVPEAAEALRAQGFRQ-LPVVIA--GDLSW----SGFRPDM 68 (76)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETTTCHHHHHHHHHTTCCS-SCEEEE--TTEEE----ESCCHHH
T ss_pred EEEEeCCCCccHHHHHHHHHh-------cCceeEEEeecCCHHHHHHHHhcCCCC-CCEEEE--CCEEE----ECCCHHH
Confidence 567888999999876544433 35788889998876543 4568887 998765 55432 3355555
Q ss_pred H
Q psy12972 954 M 954 (1578)
Q Consensus 954 L 954 (1578)
|
T Consensus 69 i 69 (76)
T d1h75a_ 69 I 69 (76)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >d2cx4a1 c.47.1.10 (A:4-163) Bacterioferritin comigratory protein {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Bacterioferritin comigratory protein species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=89.38 E-value=0.041 Score=54.83 Aligned_cols=42 Identities=14% Similarity=0.394 Sum_probs=35.0
Q ss_pred Cccceeccc-cccccccccchHHHHHHHHHhcCCCcceeeeee
Q psy12972 765 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHY 806 (1578)
Q Consensus 765 ~~~~lV~FY-ApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~ 806 (1578)
++++++.|| +.||++|....|.+.++++.+++.++.++.+..
T Consensus 30 gk~vvl~f~~~~~cp~C~~~~~~l~~~~~~~~~~~~~vv~is~ 72 (160)
T d2cx4a1 30 GRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISV 72 (160)
T ss_dssp SSCEEEEECSCTTCHHHHHHHHHHHHTCTTTSTTCCEEEEEES
T ss_pred CCEEEEEecccccCCchhhhhhhhhcccccccccccccccccc
Confidence 467888888 899999999999999999999888766655543
|
| >d2f8aa1 c.47.1.10 (A:12-195) Glutathione peroxidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Glutathione peroxidase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.63 E-value=0.096 Score=53.80 Aligned_cols=41 Identities=15% Similarity=0.058 Sum_probs=35.2
Q ss_pred cCccceeccccccccccccchHHHHHHHHHhcCCCcceeee
Q psy12972 764 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTV 804 (1578)
Q Consensus 764 ~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~ 804 (1578)
.++++||-+.|+|||.|.+-.|..+++.+++++.+..+.-.
T Consensus 23 kGKvvLivN~AS~Cg~t~~~y~~L~~L~~ky~~~g~~Il~f 63 (184)
T d2f8aa1 23 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGF 63 (184)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEecccCCcchhhhHHHHHhhhhhcccceeEEEe
Confidence 56889999999999999999999999999999876554433
|
| >d1wp0a1 c.47.1.10 (A:138-297) Thioredoxin-like protein Sco1 (YpmQ), soluble domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Thioredoxin-like protein Sco1 (YpmQ), soluble domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.21 E-value=0.35 Score=47.19 Aligned_cols=89 Identities=15% Similarity=0.155 Sum_probs=58.1
Q ss_pred CCcEEEEEEcCCCc-ccccccHHHHHHHHHhCCCc----eEEEEEECcc--c--------------------------hh
Q psy12972 873 TTPHLILFYSDWCF-ACLQVEPIFKKLMDELSPLG----VGFFTVHVHN--E--------------------------QG 919 (1578)
Q Consensus 873 ~~~~LV~FyapwCg-~Ck~l~p~~~~lA~~l~~~~----v~~a~VDc~~--~--------------------------~~ 919 (1578)
.+++||.|+.+||+ .|....+.+.++.+.+...+ +.+..+..+. . ..
T Consensus 20 GK~vll~F~~t~C~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (160)
T d1wp0a1 20 GQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQ 99 (160)
T ss_dssp TSEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHCTTSCCEEEEEEESCTTTCCHHHHHHHHHTTCTTCEEEECCHHHHHH
T ss_pred CCEEEEEEECCCCccccccchHHHHHHHHHhhcccccccccccccccCCCcccHHHHHHHHhhcCCCcccccCchHHhhH
Confidence 68999999999996 68888888888877653221 3333333211 0 13
Q ss_pred hHhHcCccccC---------------CcEEEE-cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 920 LARRLGVGSQL---------------PQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 920 L~~k~gV~~~~---------------PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+...|++.. . ++++++ ++|+...++.+..++++|.+-|++.+
T Consensus 100 ~~~~~~~~~-~~~~~~~~~~~~~~H~~~~~LId~~G~i~~~~~~~~~~~~i~~~I~~~l 157 (160)
T d1wp0a1 100 VARAYRVYY-SPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHM 157 (160)
T ss_dssp HHHHTTCCE-EECCCCGGGCCCEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHH
T ss_pred Hhhhhheee-ecccCCCCCCceEeccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 455555432 2 345555 78888877777788888888777654
|
| >d1fvka_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: DsbA-like domain: Disulfide-bond formation facilitator (DsbA) species: Escherichia coli [TaxId: 562]
Probab=88.15 E-value=0.2 Score=50.77 Aligned_cols=42 Identities=26% Similarity=0.481 Sum_probs=28.4
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhC--CCceEEEEEE
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELS--PLGVGFFTVH 913 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~--~~~v~~a~VD 913 (1578)
...+.+|.|++-.|+||+++.|....+.+..+ ..++.+...+
T Consensus 17 ~~~~~VvEffdy~Cp~C~~~~~~l~~~~~~~~~~~~~~~~~~~~ 60 (188)
T d1fvka_ 17 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYH 60 (188)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTTCHHHHHHTTSCTTCCEEEEE
T ss_pred CCCCEEEEEECCCChhhHHHHHHHHHHHHHhhccCCceEEEEEe
Confidence 35677999999999999999887654444322 1125555554
|
| >d1qmva_ c.47.1.10 (A:) Thioredoxin peroxidase 2 (thioredoxin peroxidase B, 2-cys peroxiredoxin) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Thioredoxin peroxidase 2 (thioredoxin peroxidase B, 2-cys peroxiredoxin) species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.20 E-value=0.83 Score=46.99 Aligned_cols=88 Identities=18% Similarity=0.300 Sum_probs=62.1
Q ss_pred CCcEEEEEE-cCCCcccccccHHHHHHHHHhCCCceEEEEEECcc----------------------------chhhHhH
Q psy12972 873 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------------EQGLARR 923 (1578)
Q Consensus 873 ~~~~LV~Fy-apwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~----------------------------~~~L~~k 923 (1578)
.+++++.|| ++||+.|..-...+.+...+++..++.+..|.++. +.++++.
T Consensus 34 Gk~~vL~FyP~~~tp~C~~e~~~~~~~~~~f~~~g~~vigIS~D~~~~~~~~~~~~~~~~~~~~~~fpll~D~~~~va~~ 113 (197)
T d1qmva_ 34 GKYVVLFFYPLDFTFVCPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSED 113 (197)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEecccccccchhhhHHHHHHHHHhccCCcEEEEEecCCHHHHHhhhcchhhhcCcCCCccceEeccchHHHHH
Confidence 467788888 99999999999999999999998888888888752 2357888
Q ss_pred cCccc-----cCCcEEEE-cCCcccc---cc-CCCCCHHHHHHHHHh
Q psy12972 924 LGVGS-----QLPQIALL-TDGRTSF---FK-EPSFSVQKMVEFFRL 960 (1578)
Q Consensus 924 ~gV~~-----~~PTl~lf-~~G~~~~---y~-~G~~s~~~L~~fi~~ 960 (1578)
||+-. .+|+..++ ++|.+.. +. .-.++.+++...++.
T Consensus 114 ygv~~~~~g~~~R~tfiID~~g~Ir~~~~~~~~~~r~~~E~lr~l~a 160 (197)
T d1qmva_ 114 YGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQA 160 (197)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred hCCCcccCCeeeEEEEEECCCCcEEEEEecCCCcccCHHHHHHHHHh
Confidence 88742 13444444 5665432 11 123778888877753
|
| >d1qxha_ c.47.1.10 (A:) Thiol peroxidase Tpx {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Thiol peroxidase Tpx species: Escherichia coli [TaxId: 562]
Probab=85.75 E-value=0.61 Score=46.45 Aligned_cols=42 Identities=12% Similarity=0.125 Sum_probs=33.3
Q ss_pred CCcEEEEEE-cCCCcccccccHHHHHHHHHhCCCceEEEEEECcc
Q psy12972 873 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN 916 (1578)
Q Consensus 873 ~~~~LV~Fy-apwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~ 916 (1578)
.+++++.|| +.||+.|..-.|.+.+++.++.+ +.+..|..+.
T Consensus 44 GK~vvl~f~~~~~~p~C~~~~~~l~~~~~~~~~--~~vv~Is~d~ 86 (164)
T d1qxha_ 44 GKRKVLNIFPSIDTGVCAASVRKFNQLATEIDN--TVVLCISADL 86 (164)
T ss_dssp TSEEEEEECSCSCSSCCCHHHHHHHHHHHTSTT--EEEEEEESSC
T ss_pred CCeEEEEEecchhcccchHHHHHHHHHHHhhcc--ceeeeEEcCC
Confidence 467777777 77999999999999999887753 6777776654
|
| >d1a8ya3 c.47.1.3 (A:229-347) Calsequestrin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Calsequestrin domain: Calsequestrin species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=85.66 E-value=2.1 Score=39.19 Aligned_cols=109 Identities=14% Similarity=0.229 Sum_probs=64.7
Q ss_pred cccCchhhhhhcCC-CCceEEEEEe-cCCcchHHHHHHHHHHHhhccCCCC-cEEEEEEecCcch----HHHHhccCCCC
Q psy12972 1079 PRISSQSMLDAVCP-VKKLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHN-NIAFMYVFIEKQP----EFVNALTSPED 1151 (1578)
Q Consensus 1079 peLts~~~~~~~c~-~~~lcVll~~-~~~~~~~~~~~~lr~vA~~~~~~~~-~v~F~~vd~~~q~----~~~~~f~~~~~ 1151 (1578)
.+|+.+++++.-.. .....+++|+ +++++.-+..+.++++|+. ++.+ .+.|+|||-+..+ -|.+.|..
T Consensus 3 rKl~~e~m~e~W~dd~~g~~IvAFaee~d~dG~eFl~ilk~vA~~--nt~n~~LsivWIDPD~FPlm~~yWe~tF~I--- 77 (119)
T d1a8ya3 3 RKLKPESMYETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQD--NTDNPDLSIIWIDPDDFPLLVPYWEKTFDI--- 77 (119)
T ss_dssp EECCTTTHHHHHTCCBTTEEEEEECCTTSHHHHHHHHHHHHHHHH--STTCSSCCEEEECGGGCTTTHHHHHHHHTC---
T ss_pred cccchHHHHHHHhcccCCceEEEEecCCCccHHHHHHHHHHHHHH--cCcCCCceEEEECCcccchHHHHHHHhcCC---
Confidence 34566666665532 1256677776 4556677889999999999 7664 5999999998766 45566622
Q ss_pred CCcc-ccceeEEEEEcCCcceEeeccCCcccccccccccHHHHHHHhhhhh
Q psy12972 1152 SSEI-SLHIAAMWRMDYKKIKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLV 1201 (1578)
Q Consensus 1152 ~~~~-~~~lp~l~~~n~~~~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll 1201 (1578)
++ .+++=+|-+.+....-|.+-+.. .--|.+.|++.|+.++
T Consensus 78 --Dl~~PqIGVVdv~dadSvW~~~~~~~-------d~~t~~~Le~WiedVl 119 (119)
T d1a8ya3 78 --DLSAPQIGVVNVTDADSVWMEMDDEE-------DLPSAEELEDWLEDVL 119 (119)
T ss_dssp --CTTSCEEEEEETTTCCEEECC--------------CCHHHHHHHHHHHC
T ss_pred --CCCCCceeeEecccCcceeeeccccc-------ccccHHHHHHHHHHhC
Confidence 22 13444444444434444432321 1236677888887664
|
| >d1we0a1 c.47.1.10 (A:1-166) Alkyl hydroperoxide reductase AhpC {Amphibacillus xylanus [TaxId: 1449]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Alkyl hydroperoxide reductase AhpC species: Amphibacillus xylanus [TaxId: 1449]
Probab=85.00 E-value=0.22 Score=50.12 Aligned_cols=40 Identities=28% Similarity=0.495 Sum_probs=32.9
Q ss_pred Cccceeccccc-cccccccchHHHHHHHHHhcCCCcceeee
Q psy12972 765 TTPHLILFYSD-WCFACLQVEPIFKKLMDELSPLGVGFFTV 804 (1578)
Q Consensus 765 ~~~~lV~FYAp-wCghCk~LaP~weklA~~Lk~~~vg~v~~ 804 (1578)
++++++.||+. ||+.|..-.|.+.++++++++.++.++-+
T Consensus 31 GK~vvl~F~p~~~~p~C~~e~~~~~~~~~~f~~~g~~vv~I 71 (166)
T d1we0a1 31 GKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSV 71 (166)
T ss_dssp SSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred CCeEEEEEecccCCcHHHHHHHHHHHHHHhhcccceEEEec
Confidence 45678889965 99999999999999999998876655433
|
| >d1prxa_ c.47.1.10 (A:) 1-Cys peroxiredoxin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: 1-Cys peroxiredoxin species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.66 E-value=1.1 Score=46.71 Aligned_cols=88 Identities=13% Similarity=0.162 Sum_probs=61.0
Q ss_pred CCcEEEEEE-cCCCcccccccHHHHHHHHHhCCCceEEEEEECc-------------------------------cchhh
Q psy12972 873 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-------------------------------NEQGL 920 (1578)
Q Consensus 873 ~~~~LV~Fy-apwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~-------------------------------~~~~L 920 (1578)
++++++.|| ++||+.|..-...+.+...+++..++.+..|.++ .+.++
T Consensus 27 ~k~vVLfFyP~dftpvC~~El~~~~~~~~~f~~~g~~v~giS~Ds~~sh~~~~~~~~~~~~~~~~~~l~fpllsD~~~~v 106 (220)
T d1prxa_ 27 DSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNREL 106 (220)
T ss_dssp TSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHH
T ss_pred CCeEEEEEECCCCCCcchhhHHHHHHHHHHhhcccceeeccccccccchhhhhhhhhhccccccccCcccccccCcccHH
Confidence 467777788 7899999999999999999999888777777654 23478
Q ss_pred HhHcCccc-----------cCCcEEEE-cCCcccc--cc--CCCCCHHHHHHHHHh
Q psy12972 921 ARRLGVGS-----------QLPQIALL-TDGRTSF--FK--EPSFSVQKMVEFFRL 960 (1578)
Q Consensus 921 ~~k~gV~~-----------~~PTl~lf-~~G~~~~--y~--~G~~s~~~L~~fi~~ 960 (1578)
|+.||+-. ..++..++ ++|.+.. .+ .-.|+.++++.-++.
T Consensus 107 a~~ygv~~~~~~~~~~~~~~~RatFIID~~g~Ir~~~~~~~~~gR~~dEiLr~l~a 162 (220)
T d1prxa_ 107 AILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVIS 162 (220)
T ss_dssp HHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHH
T ss_pred HHHhCCccccccccccceeeeEEEEEEcCccceeEEEEecCCcccchHHHHHHHHH
Confidence 88888741 02344444 6666421 11 123788888877653
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=84.29 E-value=0.2 Score=51.10 Aligned_cols=28 Identities=7% Similarity=0.048 Sum_probs=23.7
Q ss_pred cceeeeeeceeee----CCCEEEEEEeCCCch
Q psy12972 163 NPIAAASLAQSMV----TDEALGIKLHEFHEA 190 (1578)
Q Consensus 163 ~PiasASi~QVh~----~g~~vavKv~~p~v~ 190 (1578)
++||+++-|+||+ +|++|||||+||+..
T Consensus 6 ~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~ 37 (191)
T d1zara2 6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHT 37 (191)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC---
T ss_pred CEeeeCcceEEEEEECCCCCEEEEEEEecccc
Confidence 5899999999999 899999999999853
|
| >d2bmxa1 c.47.1.10 (A:2-170) Alkyl hydroperoxide reductase AhpC {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Alkyl hydroperoxide reductase AhpC species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=84.05 E-value=0.23 Score=49.89 Aligned_cols=44 Identities=25% Similarity=0.430 Sum_probs=35.8
Q ss_pred cCccceeccc-cccccccccchHHHHHHHHHhcCCCcceeeeeec
Q psy12972 764 YTTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYD 807 (1578)
Q Consensus 764 ~~~~~lV~FY-ApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~ 807 (1578)
.++++++.|| +.||+.|..-.+.+.+.++++++.++.++-+..+
T Consensus 43 ~GK~vvl~f~p~~~~p~C~~~~~~~~~~~~~~~~~g~~vv~is~d 87 (169)
T d2bmxa1 43 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSID 87 (169)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESS
T ss_pred CCCeEEEEEecCCCCccccccccccccccccccccCcceeecccc
Confidence 3456677888 9999999999999999999999887766655444
|
| >d1psqa_ c.47.1.10 (A:) Probable thiol peroxidase PsaD {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Probable thiol peroxidase PsaD species: Streptococcus pneumoniae [TaxId: 1313]
Probab=83.77 E-value=1.4 Score=43.50 Aligned_cols=41 Identities=15% Similarity=0.081 Sum_probs=30.8
Q ss_pred CCcEEEEEE-cCCCcccccccHHHHHHHHHhCCCceEEEEEECc
Q psy12972 873 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH 915 (1578)
Q Consensus 873 ~~~~LV~Fy-apwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~ 915 (1578)
.++++|.|| +.||+.|..-.+.+.+...++++ +.+..|..+
T Consensus 42 gk~~vl~f~~~~~~p~C~~~~~~l~~~~~~~~~--~~vv~Is~d 83 (163)
T d1psqa_ 42 GKKKVLSVVPSIDTGICSTQTRRFNEELAGLDN--TVVLTVSMD 83 (163)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHTTTCTT--EEEEEEESS
T ss_pred CcEEEEEeccccccccchhhHHHHHHHHHhhcc--cceEEEEec
Confidence 467788788 78999999988888887777754 566666543
|
| >d1zofa1 c.47.1.10 (A:1-170) Thioredoxin reductase TsaA {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Thioredoxin reductase TsaA species: Helicobacter pylori [TaxId: 210]
Probab=82.25 E-value=0.28 Score=49.45 Aligned_cols=44 Identities=20% Similarity=0.430 Sum_probs=36.5
Q ss_pred Cccceeccc-cccccccccchHHHHHHHHHhcCCCcceeeeeecc
Q psy12972 765 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL 808 (1578)
Q Consensus 765 ~~~~lV~FY-ApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~ 808 (1578)
++++++.|| +.||+.|..-.+.+.+..+++++.++.++-+..+.
T Consensus 33 k~~vvl~FyP~~~tp~C~~e~~~~~~~~~~f~~~g~~Vvgis~d~ 77 (170)
T d1zofa1 33 KNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDS 77 (170)
T ss_dssp SSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSC
T ss_pred CCEEEEEEEccccCCcCHHHHHHHHHhHHhhccCCeeEecccccc
Confidence 456788889 89999999999999999999998877666665543
|
| >d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli, Grx3 [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Thioltransferase domain: Glutaredoxin (Grx, thioltransferase) species: Escherichia coli, Grx3 [TaxId: 562]
Probab=81.60 E-value=0.41 Score=41.91 Aligned_cols=55 Identities=20% Similarity=0.473 Sum_probs=37.7
Q ss_pred EEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchh----hHhHcCccccCCcEEEEcCCcc
Q psy12972 877 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQG----LARRLGVGSQLPQIALLTDGRT 941 (1578)
Q Consensus 877 LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~----L~~k~gV~~~~PTl~lf~~G~~ 941 (1578)
+..|..+||++|.+....+++ .++.+..+|.+.+.+ +-+..|..+ +|.+. .+|+.
T Consensus 3 I~iys~~~Cp~C~~ak~~L~~-------~~i~y~~~di~~~~~~~~~~~~~~g~~t-vP~i~--i~~~~ 61 (82)
T d1fova_ 3 VEIYTKETCPYCHRAKALLSS-------KGVSFQELPIDGNAAKREEMIKRSGRTT-VPQIF--IDAQH 61 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCCEEEECTTCSHHHHHHHHHHSSCC-SCEEE--ETTEE
T ss_pred EEEEeCCCCHhHHHHHHHHHH-------cCCCeEEEeccchHHHHHHHHHHhCCCC-CCeEE--ECCEE
Confidence 456889999999876544433 247788888887654 345557776 99764 46653
|
| >d1qxha_ c.47.1.10 (A:) Thiol peroxidase Tpx {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Thiol peroxidase Tpx species: Escherichia coli [TaxId: 562]
Probab=81.45 E-value=0.28 Score=49.04 Aligned_cols=33 Identities=15% Similarity=0.159 Sum_probs=26.7
Q ss_pred Cccceeccc-cccccccccchHHHHHHHHHhcCC
Q psy12972 765 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPL 797 (1578)
Q Consensus 765 ~~~~lV~FY-ApwCghCk~LaP~weklA~~Lk~~ 797 (1578)
++++++.|| +.||++|..-.|.+++++.+..+.
T Consensus 44 GK~vvl~f~~~~~~p~C~~~~~~l~~~~~~~~~~ 77 (164)
T d1qxha_ 44 GKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNT 77 (164)
T ss_dssp TSEEEEEECSCSCSSCCCHHHHHHHHHHHTSTTE
T ss_pred CCeEEEEEecchhcccchHHHHHHHHHHHhhccc
Confidence 456777777 779999999999999998877543
|