Psyllid ID: psy12992

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
Protein Sequence
MNKSQMGSGLEQRRKNNNKSQMGSGLEQSRKNNNKSQMGSGLEQSRRSDNKSQMGSGLEQRRKNNNKSQMGSDLEQREGKVITKVRWEVNLLGRAWQCNSPKQKWMWHKRDHSSSSSSLVLSIVHTDIRVVIKSHSWVIRVNFLVFIFLMRRVFFLFIVIFLLLILLFFFIGLEQRRKNDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRKSDNKSQMGSEFVG
Secondary Structure (PSIPRED)
cccccccccHHHHccccccccccccEEEEcccccccccccccEEcccccccccccccEEccccccccccccccHHHccccccEEEEcEEEEcccccccccccccccEEEccccccccccEEEEEEEccEEEEEcccEEEEEcHHHHHHHHHcccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEcccccccccccccEEcccccHcccccccEHEcccccHccccccHHHHccccHHcccccccHHHHccccHHcccccccHHHccccccccccccEEEEccccccccccccHHHcccccHHHccccccHHHHccccccHccccccHHHHcccccHHccccccHHHccccccccccccccEccccccccccccccHHHcccccHccccccccHcccccccccccccccHcccccccccccccccHccccccccccccccEEEccccccccccccccHHcccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mnksqmgsgleqrrknnnksqmgsgleqsrknnnksqmgsgleqsrrsdnksqmgsgleqrrknnnksqmgsdleqregkVITKVRWEVNLLGrawqcnspkqkwmwhkrdhsssssslVLSIVHTDIRVVIKSHSWVIRVNFLVFIFLMRRVFFLFIVIFLLLILLFFFIGLeqrrkndnksqmgsgleqsrrsdnksqmgsgleqsrrsdnksqmgsgleqsrrsdnksqmgsgleqsrrsdnksqmgsgleqsrrsdnksqmgsgleqsrrsdnksqmgsgleqsrrsdnksqmgsgleqsrksdnksqmgsefvg
Flexible Loop (DISEMBL)
mnksqmgsgleqrrknnnksqmgsgleqsrknnnksqmgsgleqsrrsdnksqmgsgleqrrknnnksqmgsdleqregkviTKVRWEVNLLGRAWQCNSPKQKWMWHKRDHSSSSSSLVLSIVHTDIRVVIKSHSWVIRVNFLVFIFLMRRVFFLFIVIFLLLILLFFFIGLEQRrkndnksqmgsgleqsrrsdnksqmgsgleqsrrsdnksqmgsgleqsrrsdnksqmgsgleqsrrsdnksqmgsgleqsrrsdnksqmgsgleqsrrsdnksqmgsgleqsrrsdnksqmgsgleqsrksdnksqmgsefvg
Low Complexity Region (SEG)
MNKSQMGSGLEQRRKNNNKSQMGSGLEQSRKNNNKSQMGSGLEQSRRSDNKSQMGSGLEQRRKNNNKSQMGSDLEQREGKVITKVRWEVNLLGRAWQCNSPKQKWMWHKRDHsssssslvlsIVHTDIRVVIKSHSWVIRVNFLVFIFLMRRvfflfiviflllillfffiGLEQRRKNDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRKSDNKSQMGSEFVG
Disordered region (IsUnstruct)
*******************************************************************************KVITKVRWEVNLLGRAWQCNSPKQKWMWHK********SLVLSIVHTDIRVVIKSHSWVIRVNFLVFIFLMRRVFFLFIVIFLLLILLFFFIGL**************************************************************************************************************************************************
Disordered Region (DISOPRED)
*******************************************************************************************************************************************************************************************************************************************************************************************************************************
Disordered Region (DISEMBL)
*****************************************************************************EGKVITKVRWEVNLLGRAWQCNSP******************VLSIVHTDIRVVIKSHSWVIRVNFLVFIFLMRRVFFLFIVIFLLLILLFFFIGLEQRRK*********************************************************************************************************************************************
Disordered Region (DISPRO)
*******************************************************************************************************************************************************************************************************************************************************************************************************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNKSQMGSGLEQRRKNNNKSQMGSGLEQSRKNNNKSQMGSGLEQSRRSDNKSQMGSGLEQRRKNNNKSQMGSDLEQREGKVITKVRWEVNLLGRAWQCNSPKQKWMWHKRDHSSSSSSLVLSIVHTDIRVVIKSHSWVIRVNFLVFIFLMRRVFFLFIVIFLLLILLFFFIGLEQRRKNDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRKSDNKSQMGSEFVG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
28625005	618	fibrinogen-binding protein [Streptococcu	0.818	0.422	0.417	4e-09
401408671	2995	conserved hypothetical protein [Neospora	0.423	0.045	0.272	4e-08
268552813	350	Hypothetical protein CBG04382 [Caenorhab	0.454	0.414	0.378	6e-07
510184	493	liver stage antigen-1, partial [Plasmodi	0.442	0.286	0.449	1e-06
401416114	2840	conserved hypothetical protein [Leishman	0.394	0.044	0.298	3e-06
9916	1909	liver stage antigen [Plasmodium falcipar	0.420	0.070	0.457	1e-05
188988359	362	circumsporozoite protein [Plasmodium kno	0.416	0.367	0.311	1e-05
259575260	356	circumsporozoite protein [Plasmodium kno	0.379	0.339	0.325	1e-05
4097231	487	multiple banded antigen [Ureaplasma urea	0.529	0.347	0.284	3e-05
209554608	423	multiple banded antigen [Ureaplasma urea	0.529	0.399	0.284	3e-05

>gi|28625005|emb|CAD27181.1| fibrinogen-binding protein [Streptococcus agalactiae]

 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 136/326 (41%), Positives = 199/326 (61%), Gaps = 65/326 (19%)

Query: 2   NKSQMGSGLEQRRKN-NNKSQMGSGLEQ-SRKNNNKSQMGSGLEQSRR-SDNKSQMGSGL 58
           NKSQ G+ LE+R+++ +NKSQ G+ LE+  R  +NKSQ G+ LE+ +R +DNKSQ G+ L
Sbjct: 169 NKSQ-GNVLERRQRDADNKSQ-GNVLERRQRDADNKSQ-GNVLERRQRDADNKSQ-GNVL 224

Query: 59  EQRRKN-NNKSQMGSDLEQREGKVITKVRWEVNLLGRAWQCNSPKQKWMWHKR--DHSSS 115
           E+R+++ +NKSQ G+ LE+R+     K +  V L  R    ++  Q  +  +R  D  + 
Sbjct: 225 ERRQRDADNKSQ-GNVLERRQRDADNKSQGNV-LERRQRDADNKSQGNVLERRQRDADNK 282

Query: 116 SSSLVLSIVHTDIRVVIKSHSWVIRVNFLVFIFLMRRVFFLFIVIFLLLILLFFFIGLEQ 175
           S   VL     D  V  KS   V                                  LE+
Sbjct: 283 SQGNVLERRQRD--VDNKSQGNV----------------------------------LER 306

Query: 176 RRKN-DNKSQMGSGLEQSRR-SDNKSQMGSGLEQSRR-SDNKSQMGSGLEQSRR-SDNKS 231
           R+++ DNKSQ G+ LE+ +R +DNKSQ G+ LE+ +R +DNKSQ G+ LE+ +R +DNKS
Sbjct: 307 RQRDADNKSQ-GNVLERRQRDADNKSQ-GNVLERRQRDADNKSQ-GNVLERRQRDADNKS 363

Query: 232 QMGSGLEQSRR-SDNKSQMGSGLEQSRR-SDNKSQMGSGLEQSRR-SDNKSQMGSGLEQS 288
           Q G+ LE+ +R +DNKSQ G+ LE+ +R +DNKSQ G+ LE+ +R +DNKSQ G+ LE+ 
Sbjct: 364 Q-GNVLERRQRDADNKSQ-GNVLERRQRDADNKSQ-GNVLERRQRDADNKSQ-GNVLERR 419

Query: 289 RR-SDNKSQMGSGLEQ-SRKSDNKSQ 312
           +R +DNKSQ G+ LE+  R +DNKSQ
Sbjct: 420 QRDADNKSQ-GNVLERRQRDADNKSQ 444

Source: Streptococcus agalactiae

Species: Streptococcus agalactiae

Genus: Streptococcus

Family: Streptococcaceae

Order: Lactobacillales

Class: Bacilli

Phylum: Firmicutes

Superkingdom: Bacteria

>gi|401408671|ref|XP_003883784.1| conserved hypothetical protein [Neospora caninum Liverpool] gi|325118201|emb|CBZ53752.1| conserved hypothetical protein [Neospora caninum Liverpool]

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/143 (27%), Positives = 75/143 (52%)

Query: 174 EQRRKNDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQM 233
           E++ +ND K ++ S  ++   SD K ++ S  ++   SD K ++ S  ++   SD + ++
Sbjct: 533 EEKARNDEKEKVASDEKEKVASDEKEKVASDEKEKVASDEKEKVASDEKEKVASDEEEKV 592

Query: 234 GSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDN 293
            S  ++   SD K ++ S  E+  R+D K ++ S  ++   SD K ++ S  ++S  SD 
Sbjct: 593 ASDEKEKVASDEKEKVASDEEEKARNDEKEKVASDEKEKVASDEKEKVASDEKESAASDE 652

Query: 294 KSQMGSGLEQSRKSDNKSQMGSE 316
           K    S  E+   SD K ++ S+
Sbjct: 653 KESAASDEEEKVASDEKEKVASD 675

Source: Neospora caninum Liverpool

Species: Neospora caninum

Genus: Neospora

Family: Sarcocystidae

Order: Eucoccidiorida

Class: Coccidia

Phylum: Apicomplexa

Superkingdom: Eukaryota

>gi|268552813|ref|XP_002634389.1| Hypothetical protein CBG04382 [Caenorhabditis briggsae]

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 81/156 (51%), Gaps = 11/156 (7%)

Query: 172 GLEQRRKNDNKSQMG-SGLEQSRRSDNKSQMG-SGLEQSRRSDNKSQMG-SGLEQSRRSD 228
           G E+ + +D  SQ    G E+S+ SD  SQ    G E+ + SD  SQ    G E++  SD
Sbjct: 149 GSEEPKPSDASSQTPVGGSEESKPSDASSQAPVGGSEEPKPSDASSQTPVGGSEETNPSD 208

Query: 229 NKSQ-MGSGLEQSRRSDNKSQMG-SGLEQSRRSDNKSQMG-SGLEQSRRSDNKSQMG-SG 284
           + SQ +  G E+ + SD  SQ    G E+S+ SD  SQ    G E+ + SD  SQ    G
Sbjct: 209 SSSQALVGGSEEPKPSDASSQTPVGGSEESKPSDASSQAPVGGSEEPKPSDASSQTPVGG 268

Query: 285 LEQSRRSDNKSQMG-SGLEQSRKSDNKSQM---GSE 316
            E+S+ SD+ SQ    G E+ + SD  SQ    GSE
Sbjct: 269 SEESKPSDSSSQAPVGGSEELKPSDASSQAPVGGSE 304

Source: Caenorhabditis briggsae

Species: Caenorhabditis briggsae

Genus: Caenorhabditis

Family: Rhabditidae

Order: Rhabditida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|510184|emb|CAA82975.1| liver stage antigen-1, partial [Plasmodium falciparum]

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 77/149 (51%), Gaps = 8/149 (5%)

Query: 172 GLEQRRKNDNKSQ-MGSGLEQSRRSDNKSQ-MGSGLEQSRRSDNKSQ-MGSGLEQSRRSD 228
            LEQ R+   K Q   S LEQ RR+  K Q   S LEQ R +  K Q   S LEQ RR+ 
Sbjct: 57  DLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQDRLAKEKLQEQQSDLEQERRAK 116

Query: 229 NKSQ-MGSGLEQSRRSDNKSQ-MGSGLEQSRRSDNKSQ-MGSGLEQSRRSDNKSQ-MGSG 284
            K Q   S LEQ RR+  K Q   S LEQ R +  K Q   S LEQ RR+  K Q   S 
Sbjct: 117 EKLQEQQSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKLQEQQSD 176

Query: 285 LEQSRRSDNKSQ-MGSGLEQSRKSDNKSQ 312
           LEQ RR+  K Q   S LEQ R++  K Q
Sbjct: 177 LEQERRAKEKLQEQQSDLEQERRAKEKLQ 205

Source: Plasmodium falciparum

Species: Plasmodium falciparum

Genus: Plasmodium

Order: Haemosporida

Class: Aconoidasida

Phylum: Apicomplexa

Superkingdom: Eukaryota

>gi|401416114|ref|XP_003872552.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] gi|322488776|emb|CBZ24023.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103]

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 57/134 (42%), Gaps = 8/134 (5%)

Query: 173 LEQRRKNDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQ 232
           LEQ R+   +      LEQ+RR   +      LEQ+RR           EQ+RR   +  
Sbjct: 588 LEQARREAEEQARREALEQARREAEEQACREALEQARREAK--------EQARREAEEQA 639

Query: 233 MGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSD 292
               LEQ+RR   +      LEQ+RR   +      LEQ+RR   +       EQ+RR  
Sbjct: 640 RREALEQARREAEEQARREALEQARREAEEQARREALEQARREAKEQARREAEEQARREA 699

Query: 293 NKSQMGSGLEQSRK 306
            +       EQ+R+
Sbjct: 700 LEQARREAEEQARR 713

Source: Leishmania mexicana MHOM/GT/2001/U1103

Species: Leishmania mexicana

Genus: Leishmania

Family: Trypanosomatidae

Order: Kinetoplastida

Superkingdom: Eukaryota

>gi|9916|emb|CAA39663.1| liver stage antigen [Plasmodium falciparum]

 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/142 (45%), Positives = 73/142 (51%), Gaps = 8/142 (5%)

Query: 172 GLEQRRKNDNKSQ-MGSGLEQSRRSDNKSQ-MGSGLEQSRRSDNKSQ-MGSGLEQSRRSD 228
            LEQ R+   K Q   S LEQ RR+  K Q   S LEQ RR+  K Q   S LEQ RR+ 
Sbjct: 691 DLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAK 750

Query: 229 NKSQ-MGSGLEQSRRSDNKSQ-MGSGLEQSRRSDNKSQ-MGSGLEQSRRSDNKSQ-MGSG 284
            K Q   S LEQ R +  K Q   S LEQ RR+  K Q   S LEQ R +  K Q   S 
Sbjct: 751 EKLQEQQSDLEQDRLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQDRLAKEKLQEQQSD 810

Query: 285 LEQSRRSDNKSQ-MGSGLEQSR 305
           LEQ RR+  K Q   S LEQ R
Sbjct: 811 LEQERRAKEKLQEQQSDLEQER 832

Source: Plasmodium falciparum

Species: Plasmodium falciparum

Genus: Plasmodium

Order: Haemosporida

Class: Aconoidasida

Phylum: Apicomplexa

Superkingdom: Eukaryota

>gi|188988359|gb|ACD67724.1| circumsporozoite protein [Plasmodium knowlesi]

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 49/135 (36%), Gaps = 2/135 (1%)

Query: 178 KNDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGL 237
           K     Q G G EQ+       Q G G EQ+       Q G G EQ+       Q G G 
Sbjct: 95  KQPGGEQAGPGGEQA--GPGGEQAGPGGEQAGPRPGGEQAGPGGEQAGPRPGGEQAGPGG 152

Query: 238 EQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQM 297
           EQ+       Q G G EQ+       Q G G EQ+       Q G G EQ+       Q 
Sbjct: 153 EQAGPRPGGEQAGPGGEQAGPRPGGEQAGPGGEQAGPRPGGEQAGPGGEQAGPRPGGEQA 212

Query: 298 GSGLEQSRKSDNKSQ 312
           G G EQ        Q
Sbjct: 213 GPGGEQPAPRPGGEQ 227

Source: Plasmodium knowlesi

Species: Plasmodium knowlesi

Genus: Plasmodium

Order: Haemosporida

Class: Aconoidasida

Phylum: Apicomplexa

Superkingdom: Eukaryota

>gi|259575260|gb|ABC88512.2| circumsporozoite protein [Plasmodium knowlesi]

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 48/123 (39%), Gaps = 2/123 (1%)

Query: 182 KSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSR 241
             Q G G EQ+       Q G G EQ+       Q G G EQ+       Q G G EQ+ 
Sbjct: 93  PDQAGPGGEQA--GPGGEQAGPGGEQAGPRPGGEQAGPGGEQAGPRPGGEQAGPGGEQAG 150

Query: 242 RSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGL 301
                 Q G G EQ+       Q G G EQ+       Q G G EQ+       Q G G 
Sbjct: 151 PRPGGEQAGPGGEQAGPRPGGEQAGPGGEQAGPRPGGEQAGPGGEQAGPRPGGEQAGPGG 210

Query: 302 EQS 304
           EQ+
Sbjct: 211 EQA 213

Source: Plasmodium knowlesi

Species: Plasmodium knowlesi

Genus: Plasmodium

Order: Haemosporida

Class: Aconoidasida

Phylum: Apicomplexa

Superkingdom: Eukaryota

>gi|4097231|gb|AAD00075.1| multiple banded antigen [Ureaplasma urealyticum]

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 75/172 (43%), Gaps = 3/172 (1%)

Query: 147 IFLMRRVFFLFIVIFLLLILLFF---FIGLEQRRKNDNKSQMGSGLEQSRRSDNKSQMGS 203
           + ++ +   L     +L   L +    IG E +  + + +Q GSG      S + +Q GS
Sbjct: 116 LTIINKGGLLKTASLVLPDNLNYQTENIGFETQPGSGSTTQPGSGSTTQPGSGSTTQPGS 175

Query: 204 GLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKS 263
           G      S + +Q GSG      S + +Q GSG      S + +Q GSG      S + +
Sbjct: 176 GSTTQPGSGSTTQPGSGSTTQPGSGSTTQPGSGSTTQPGSGSTTQPGSGSTTQPGSGSTT 235

Query: 264 QMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRKSDNKSQMGS 315
           Q GSG      S + +Q GSG      S + +Q GSG      S + +Q GS
Sbjct: 236 QPGSGSTTQPGSGSTTQPGSGSTTQPGSGSTTQPGSGSTTQPGSGSTTQPGS 287

Source: Ureaplasma urealyticum

Species: Ureaplasma urealyticum

Genus: Ureaplasma

Family: Mycoplasmataceae

Order: Mycoplasmatales

Class: Mollicutes

Phylum: Tenericutes

Superkingdom: Bacteria

>gi|209554608|ref|YP_002284808.1| multiple banded antigen [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|209542109|gb|ACI60338.1| multiple banded antigen [Ureaplasma urealyticum serovar 10 str. ATCC 33699]

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 75/172 (43%), Gaps = 3/172 (1%)

Query: 147 IFLMRRVFFLFIVIFLLLILLFF---FIGLEQRRKNDNKSQMGSGLEQSRRSDNKSQMGS 203
           + ++ +   L     +L   L +    IG E +  + + +Q GSG      S + +Q GS
Sbjct: 116 LTIINKGGLLKTASLVLPDNLNYQTENIGFETQPGSGSTTQPGSGSTTQPGSGSTTQPGS 175

Query: 204 GLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKS 263
           G      S + +Q GSG      S + +Q GSG      S + +Q GSG      S + +
Sbjct: 176 GSTTQPGSGSTTQPGSGSTTQPGSGSTTQPGSGSTTQPGSGSTTQPGSGSTTQPGSGSTT 235

Query: 264 QMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRKSDNKSQMGS 315
           Q GSG      S + +Q GSG      S + +Q GSG      S + +Q GS
Sbjct: 236 QPGSGSTTQPGSGSTTQPGSGSTTQPGSGSTTQPGSGSTTQPGSGSTTQPGS 287

Source: Ureaplasma urealyticum serovar 10 str. ATCC 33699

Species: Ureaplasma urealyticum

Genus: Ureaplasma

Family: Mycoplasmataceae

Order: Mycoplasmatales

Class: Mollicutes

Phylum: Tenericutes

Superkingdom: Bacteria

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
FB|FBgn0030738	820	CG9915 [Drosophila melanogaste	0.423	0.164	0.351	1.6e-11
FB|FBgn0019637	725	Atu "Another transcription uni	0.407	0.179	0.340	5.7e-08
SGD|S000004784	430	DDR48 "DNA damage-responsive p	0.429	0.318	0.326	9.3e-07
UNIPROTKB|G4MWB8	378	MGG_15930 "Uncharacterized pro	0.360	0.304	0.325	1.1e-08
CGD|CAL0000304	1249	HYR3 [Candida albicans (taxid:	0.407	0.104	0.358	1.6e-05
UNIPROTKB|Q59XA7	1249	HYR3 "Possible cell wall prote	0.407	0.104	0.358	1.6e-05
UNIPROTKB|Q2KEN1	257	MGCH7_ch7g1005 "Putative uncha	0.442	0.548	0.184	5.4e-08
CGD|CAL0004905	1086	IFF6 [Candida albicans (taxid:	0.429	0.126	0.352	6.1e-07
UNIPROTKB|Q59XL0	1086	IFF6 "Putative uncharacterized	0.429	0.126	0.352	6.1e-07
UNIPROTKB|Q06A99	491	SRSF4 "SFRS4" [Sus scrofa (tax	0.413	0.268	0.283	8.2e-05

FB|FBgn0030738 CG9915 [Drosophila melanogaster (taxid:7227)]

 Score = 173 (66.0 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
 Identities = 51/145 (35%), Positives = 75/145 (51%)

Query:   176 RRKNDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMG-SGLEQSRRSDNKSQMG 234
             RR      +  SG  QSR    +S+ GS  +QS RS + S+   SG  +SR    +S+ G
Sbjct:   153 RRSRSGSRRSRSGSRQSRSGSRRSRSGS--KQSHRSRSGSKRSRSGSRRSRSGSRRSRSG 210

Query:   235 SGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSR---RSDNKSQMGSGLEQSRRS 291
             S  +QSR    +S+ GS  +QSR    +S+ GS   +SR   R  N S+ GS   +S   
Sbjct:   211 S--KQSRGGSRRSRSGS--KQSRSGSRRSRSGSKRSRSRSGSRRSNASRSGSRRSRSGSV 266

Query:   292 DNKSQMGSGLEQSRKSDNKSQMGSE 316
               +S+ GSG  +SR    +S+ GS+
Sbjct:   267 SRRSRSGSGSRRSRSGSRRSRSGSK 291

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

FB|FBgn0019637 Atu "Another transcription unit" [Drosophila melanogaster (taxid:7227)]

 Score = 153 (58.9 bits), Expect = 5.7e-08, P = 5.7e-08
 Identities = 47/138 (34%), Positives = 73/138 (52%)

Query:   186 GSGLEQSRRSD--NKSQMGSGLEQSRRS---DNKSQMGSGLEQSRRSDNKSQMGSGLEQS 240
             GSG ++SR     ++S+ GSG  +S RS   +++    SG  +S+RS +     SG  +S
Sbjct:    40 GSGSDRSRSGSRSSRSRSGSGSPRSARSGSAESRHSQLSGSARSKRSRSAHSRRSGSARS 99

Query:   241 RRS---DNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQM 297
             R+S   ++     SG  QSR+S +     SG  QSR+S +     SG   SRRS +    
Sbjct:   100 RKSGTPESPQSHRSGSLQSRKSGSPQSRRSGSPQSRKSGSTHSRRSGSAHSRRSGSARSR 159

Query:   298 GSGLEQSRKSDNKSQMGS 315
              SG  QS +S+++S+  S
Sbjct:   160 KSGSAQSDRSESRSRSHS 177

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0035206 "regulation of hemocyte proliferation" evidence=IMP

SGD|S000004784 DDR48 "DNA damage-responsive protein" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 136 (52.9 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
 Identities = 47/144 (32%), Positives = 60/144 (41%)

Query:   179 NDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNK--SQMGSG 236
             ++N    GS    S  S+N    GS    S  S+N    GS  + S  S NK  S  GS 
Sbjct:    74 SNNNDSYGSNNNDSYGSNNNDSYGSNNNDSYGSNNNDSYGSNNDDSYGSSNKKKSSYGSN 133

Query:   237 LEQSR-RSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNK--SQMGSGLEQSRRSDN 293
              + S   S+N    GS    S  S+N    GS  + S  S NK  S  GS  + S  S+N
Sbjct:   134 NDDSYGSSNNNDSYGSNNNDSYGSNNNDSYGSNNDDSYGSSNKNKSSYGSNNDDSYGSNN 193

Query:   294 KSQMGSGLEQ--SRKSDNKSQMGS 315
                 GS  ++  S  S N    GS
Sbjct:   194 DDSYGSSNKKKSSYGSSNNDSYGS 217

GO:0016887 "ATPase activity" evidence=IDA

GO:0006950 "response to stress" evidence=IEA

GO:0003924 "GTPase activity" evidence=IDA

GO:0006281 "DNA repair" evidence=IMP;IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|G4MWB8 MGG_15930 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 135 (52.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
 Identities = 44/135 (32%), Positives = 72/135 (53%)

Query:   181 NKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQS 240
             N  Q GSG  +  R+D  S++ + L+Q+    N  Q GSG  +  R+D  S++ + L+Q+
Sbjct:   162 NPQQTGSGTTRPSRADTASRLAA-LQQA----NPQQTGSGTTRPSRADTASRLAA-LQQA 215

Query:   241 RRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSG 300
                 N  Q GSG  +  R+D  S++ + L+Q+    N  Q GSG  +  R+D  S++ + 
Sbjct:   216 ----NPQQTGSGTTRPSRADTASRLAA-LQQA----NPQQTGSGTTRPSRADTASRLAA- 265

Query:   301 LEQSRKSDNKSQMGS 315
             L+Q+    N  Q GS
Sbjct:   266 LQQA----NPQQTGS 276

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

CGD|CAL0000304 HYR3 [Candida albicans (taxid:5476)]

 Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 53/148 (35%), Positives = 64/148 (43%)

Query:   172 GLEQRRKNDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKS 231
             G      N + +  GSG   +  S+N S  G+G      SDN S  GSG      S+N S
Sbjct:   949 GSNNGSNNGSNNGSGSGNGSNNGSNNGSGSGNGFNNG--SDNGSNNGSG----NASNNGS 1002

Query:   232 QMGSGLEQSRRSDNKSQMGS--GLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSR 289
               GSG +    SDN S  GS  G      +DN S  GS  +     DN    GSG   S 
Sbjct:  1003 ASGSGSDNG--SDNGSDNGSDNGSNNGSNTDNGSNSGS--DSGNGIDN----GSGNGSSD 1054

Query:   290 RSDNKSQMGSGL--EQSRKSDNKSQMGS 315
              SDN +  GSG   E +  S N S  GS
Sbjct:  1055 GSDNGTTNGSGSGGESNNGSGNGSDNGS 1082

GO:0003674 "molecular_function" evidence=ND

GO:0009986 "cell surface" evidence=ISS;IDA

GO:0009277 "fungal-type cell wall" evidence=IDA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q59XA7 HYR3 "Possible cell wall protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 53/148 (35%), Positives = 64/148 (43%)

Query:   172 GLEQRRKNDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKS 231
             G      N + +  GSG   +  S+N S  G+G      SDN S  GSG      S+N S
Sbjct:   949 GSNNGSNNGSNNGSGSGNGSNNGSNNGSGSGNGFNNG--SDNGSNNGSG----NASNNGS 1002

Query:   232 QMGSGLEQSRRSDNKSQMGS--GLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSR 289
               GSG +    SDN S  GS  G      +DN S  GS  +     DN    GSG   S 
Sbjct:  1003 ASGSGSDNG--SDNGSDNGSDNGSNNGSNTDNGSNSGS--DSGNGIDN----GSGNGSSD 1054

Query:   290 RSDNKSQMGSGL--EQSRKSDNKSQMGS 315
              SDN +  GSG   E +  S N S  GS
Sbjct:  1055 GSDNGTTNGSGSGGESNNGSGNGSDNGS 1082

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009277 "fungal-type cell wall" evidence=IDA

GO:0009986 "cell surface" evidence=ISS;IDA

UNIPROTKB|Q2KEN1 MGCH7_ch7g1005 "Putative uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 128 (50.1 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
 Identities = 26/141 (18%), Positives = 63/141 (44%)

Query:   177 RKNDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSG 236
             R++  K+ +    + +RR   K+ +    + +RR   K+ +    + +RR   K+ +   
Sbjct:   117 RRDGGKADVAGKADVARRDGGKADVAGKADVARRDGGKADVAGKADVARRDGGKADVAGK 176

Query:   237 LEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQ 296
              + +RR   K+ +    + +RR   K+ +    + +RR   K+ +    + +RR   K+ 
Sbjct:   177 ADVARRDGGKADVAGKADVARRDGGKADVAGKADVARRDGGKADVAGKADVARRDGGKAD 236

Query:   297 MGSGLEQSRKSDNKSQMGSEF 317
             +    + +R+   K+ M   +
Sbjct:   237 VAGKADVARRDGGKADMEDSY 257

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

CGD|CAL0004905 IFF6 [Candida albicans (taxid:5476)]

 Score = 146 (56.5 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 49/139 (35%), Positives = 59/139 (42%)

Query:   179 NDNKSQMGSGLEQSRRSDNKSQMGS--GLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSG 236
             N++ S  GSG      S+N S  GS  G      SDN +  GSG +    S + S  GSG
Sbjct:   865 NESGSGSGSGNGSGDGSNNGSGNGSDNGTGSGNGSDNGTGSGSGSDNGSGSGSGSGSGSG 924

Query:   237 LEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQ 296
                   SDN S  G+G      S + S  GSG   +  S N S  GSG      S N S 
Sbjct:   925 NGSGSGSDNGSGSGNGSGSGSGSGSGSDNGSGSGSNNGSGNGSGNGSGSGSDNGSGNGSG 984

Query:   297 MGSGLEQSRKSDNKSQMGS 315
              GSG      S N +  GS
Sbjct:   985 SGSGSGSGNGSGNGTGSGS 1003

GO:0003674 "molecular_function" evidence=ND

GO:0009986 "cell surface" evidence=ISS;IDA

GO:0009277 "fungal-type cell wall" evidence=IDA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005937 "mating projection" evidence=IEA

GO:0000753 "cell morphogenesis involved in conjugation with cellular fusion" evidence=IEA

UNIPROTKB|Q59XL0 IFF6 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 146 (56.5 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 49/139 (35%), Positives = 59/139 (42%)

Query:   179 NDNKSQMGSGLEQSRRSDNKSQMGS--GLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSG 236
             N++ S  GSG      S+N S  GS  G      SDN +  GSG +    S + S  GSG
Sbjct:   865 NESGSGSGSGNGSGDGSNNGSGNGSDNGTGSGNGSDNGTGSGSGSDNGSGSGSGSGSGSG 924

Query:   237 LEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQ 296
                   SDN S  G+G      S + S  GSG   +  S N S  GSG      S N S 
Sbjct:   925 NGSGSGSDNGSGSGNGSGSGSGSGSGSDNGSGSGSNNGSGNGSGNGSGSGSDNGSGNGSG 984

Query:   297 MGSGLEQSRKSDNKSQMGS 315
              GSG      S N +  GS
Sbjct:   985 SGSGSGSGNGSGNGTGSGS 1003

GO:0003674 "molecular_function" evidence=ND

GO:0009277 "fungal-type cell wall" evidence=IDA

GO:0009986 "cell surface" evidence=ISS;IDA

UNIPROTKB|Q06A99 SRSF4 "SFRS4" [Sus scrofa (taxid:9823)]

 Score = 123 (48.4 bits), Expect = 8.2e-05, P = 8.2e-05
 Identities = 40/141 (28%), Positives = 72/141 (51%)

Query:   175 QRRKNDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMG 234
             +RR++ ++S+  S      R   KS+  SG  +S  S ++S+  SG     +S ++SQ  
Sbjct:   180 RRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 239

Query:   235 SGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNK 294
             S   +S++  ++S+  S     RRS +K Q     E+ + SDN  +  S      +S +K
Sbjct:   240 S---RSKKEKSRSRSHSRSADKRRSKSKDQAE---EKVQNSDNTGKSKSRSPSRHKSKSK 293

Query:   295 SQMGS---GLEQSRKSDNKSQ 312
             S+  S   G+E+ R S ++S+
Sbjct:   294 SRSRSQERGVEEKRGSGSRSR 314

GO:0048025 "negative regulation of mRNA splicing, via spliceosome" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	319
pfam08017	393	pfam08017, Fibrinogen_BP, Fibrinogen binding prote	3e-04
pfam08017	393	pfam08017, Fibrinogen_BP, Fibrinogen binding prote	4e-04
pfam08017	393	pfam08017, Fibrinogen_BP, Fibrinogen binding prote	7e-04
pfam08017	393	pfam08017, Fibrinogen_BP, Fibrinogen binding prote	7e-04
pfam08017	393	pfam08017, Fibrinogen_BP, Fibrinogen binding prote	9e-04
pfam08017	393	pfam08017, Fibrinogen_BP, Fibrinogen binding prote	0.001
pfam08017	393	pfam08017, Fibrinogen_BP, Fibrinogen binding prote	0.001
pfam08017	393	pfam08017, Fibrinogen_BP, Fibrinogen binding prote	0.001
pfam08017	393	pfam08017, Fibrinogen_BP, Fibrinogen binding prote	0.001

>gnl|CDD|116627 pfam08017, Fibrinogen_BP, Fibrinogen binding protein

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 43/140 (30%), Positives = 69/140 (49%)

Query: 175 QRRKNDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMG 234
           ++R  +N+SQ      + R  +NKSQ      + R  +NKSQ      + R ++N+SQ  
Sbjct: 162 RQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVLERRQRDAENRSQGN 221

Query: 235 SGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNK 294
               + R  +NKSQ      + R  +NKSQ      + R ++N+SQ      + R  +NK
Sbjct: 222 VLERRQRDVENKSQGNVLERRQRDVENKSQGNVLERRQRDAENRSQGNVLERRQRDVENK 281

Query: 295 SQMGSGLEQSRKSDNKSQMG 314
           SQ      + R ++NKSQ+G
Sbjct: 282 SQGNVLERRQRDAENKSQVG 301

Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation. Length = 393

>gnl|CDD|116627 pfam08017, Fibrinogen_BP, Fibrinogen binding protein

 Score = 41.4 bits (96), Expect = 4e-04
 Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 1/141 (0%)

Query: 173 LEQRRKNDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQ 232
           LE+R+++      G+ LE+ +R       G+ LE+ +R       G+ LE+ +R      
Sbjct: 95  LERRQRDVENKSQGNVLERRQRDVENKSQGNVLERRQRDAENRSQGNVLERRQRDAENKS 154

Query: 233 MGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRR-S 291
            G+ LE+ +R       G+ LE+ +R       G+ LE+ +R       G+ LE+ +R +
Sbjct: 155 QGNVLERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVLERRQRDA 214

Query: 292 DNKSQMGSGLEQSRKSDNKSQ 312
           +N+SQ      + R  +NKSQ
Sbjct: 215 ENRSQGNVLERRQRDVENKSQ 235

Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation. Length = 393

>gnl|CDD|116627 pfam08017, Fibrinogen_BP, Fibrinogen binding protein

 Score = 40.6 bits (94), Expect = 7e-04
 Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 1/141 (0%)

Query: 173 LEQRRKNDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQ 232
           LE+R+++      G+ LE+ +R       G+ LE+ +R       G+ LE+ +R      
Sbjct: 127 LERRQRDAENRSQGNVLERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDVENKS 186

Query: 233 MGSGLEQSRRSDNKSQMGSGLEQSRR-SDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRS 291
            G+ LE+ +R       G+ LE+ +R ++N+SQ      + R  +NKSQ      + R  
Sbjct: 187 QGNVLERRQRDVENKSQGNVLERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDV 246

Query: 292 DNKSQMGSGLEQSRKSDNKSQ 312
           +NKSQ      + R ++N+SQ
Sbjct: 247 ENKSQGNVLERRQRDAENRSQ 267

Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation. Length = 393

>gnl|CDD|116627 pfam08017, Fibrinogen_BP, Fibrinogen binding protein

 Score = 40.6 bits (94), Expect = 7e-04
 Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 1/141 (0%)

Query: 173 LEQRRKNDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQ 232
           LE+R+++      G+ LE+ +R       G+ LE+ +R       G+ LE+ +R      
Sbjct: 79  LERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVLERRQRDAENRS 138

Query: 233 MGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRR-S 291
            G+ LE+ +R       G+ LE+ +R       G+ LE+ +R       G+ LE+ +R  
Sbjct: 139 QGNVLERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDV 198

Query: 292 DNKSQMGSGLEQSRKSDNKSQ 312
           +NKSQ      + R ++N+SQ
Sbjct: 199 ENKSQGNVLERRQRDAENRSQ 219

Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation. Length = 393

>gnl|CDD|116627 pfam08017, Fibrinogen_BP, Fibrinogen binding protein

 Score = 40.2 bits (93), Expect = 9e-04
 Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 1/141 (0%)

Query: 173 LEQRRKNDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQ 232
           LE+R+++      G+ LE+ +R       G+ LE+ +R       G+ LE+ +R      
Sbjct: 143 LERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKS 202

Query: 233 MGSGLEQSRR-SDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRS 291
            G+ LE+ +R ++N+SQ      + R  +NKSQ      + R  +NKSQ      + R +
Sbjct: 203 QGNVLERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVLERRQRDA 262

Query: 292 DNKSQMGSGLEQSRKSDNKSQ 312
           +N+SQ      + R  +NKSQ
Sbjct: 263 ENRSQGNVLERRQRDVENKSQ 283

Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation. Length = 393

>gnl|CDD|116627 pfam08017, Fibrinogen_BP, Fibrinogen binding protein

 Score = 40.2 bits (93), Expect = 0.001
 Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 1/141 (0%)

Query: 173 LEQRRKNDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQ 232
           LE+R+++      G+ LE+ +R       G+ LE+ +R       G+ LE+ +R      
Sbjct: 47  LERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDVENKS 106

Query: 233 MGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRR-S 291
            G+ LE+ +R       G+ LE+ +R       G+ LE+ +R       G+ LE+ +R +
Sbjct: 107 QGNVLERRQRDVENKSQGNVLERRQRDAENRSQGNVLERRQRDAENKSQGNVLERRQRDA 166

Query: 292 DNKSQMGSGLEQSRKSDNKSQ 312
           +N+SQ      + R  +NKSQ
Sbjct: 167 ENRSQGNVLERRQRDVENKSQ 187

Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation. Length = 393

>gnl|CDD|116627 pfam08017, Fibrinogen_BP, Fibrinogen binding protein

 Score = 40.2 bits (93), Expect = 0.001
 Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 1/141 (0%)

Query: 173 LEQRRKNDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQ 232
           LE+R+++      G+ LE+ +R       G+ LE+ +R       G+ LE+ +R      
Sbjct: 31  LERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENRS 90

Query: 233 MGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRR-SDNKSQMGSGLEQSRRS 291
            G+ LE+ +R       G+ LE+ +R       G+ LE+ +R ++N+SQ      + R +
Sbjct: 91  QGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVLERRQRDAENRSQGNVLERRQRDA 150

Query: 292 DNKSQMGSGLEQSRKSDNKSQ 312
           +NKSQ      + R ++N+SQ
Sbjct: 151 ENKSQGNVLERRQRDAENRSQ 171

Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation. Length = 393

>gnl|CDD|116627 pfam08017, Fibrinogen_BP, Fibrinogen binding protein

 Score = 39.8 bits (92), Expect = 0.001
 Identities = 41/139 (29%), Positives = 68/139 (48%)

Query: 174 EQRRKNDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQM 233
            ++R  +N+SQ      + R ++N+SQ      + R  +NKSQ      + R  +NKSQ 
Sbjct: 65  RRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKSQG 124

Query: 234 GSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDN 293
                + R ++N+SQ      + R ++NKSQ      + R ++N+SQ      + R  +N
Sbjct: 125 NVLERRQRDAENRSQGNVLERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDVEN 184

Query: 294 KSQMGSGLEQSRKSDNKSQ 312
           KSQ      + R  +NKSQ
Sbjct: 185 KSQGNVLERRQRDVENKSQ 203

Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation. Length = 393

>gnl|CDD|116627 pfam08017, Fibrinogen_BP, Fibrinogen binding protein

 Score = 39.8 bits (92), Expect = 0.001
 Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 1/141 (0%)

Query: 173 LEQRRKNDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQ 232
           LE+R+++      G+ LE+ +R       G+ LE+ +R       G+ LE+ +R      
Sbjct: 111 LERRQRDVENKSQGNVLERRQRDAENRSQGNVLERRQRDAENKSQGNVLERRQRDAENRS 170

Query: 233 MGSGLEQSRRSDNKSQMGSGLEQSRRSDNKSQMGSGLEQSRR-SDNKSQMGSGLEQSRRS 291
            G+ LE+ +R       G+ LE+ +R       G+ LE+ +R ++N+SQ      + R  
Sbjct: 171 QGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVLERRQRDAENRSQGNVLERRQRDV 230

Query: 292 DNKSQMGSGLEQSRKSDNKSQ 312
           +NKSQ      + R  +NKSQ
Sbjct: 231 ENKSQGNVLERRQRDVENKSQ 251

Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation. Length = 393

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	319
PF12273	130	RCR: Chitin synthesis regulation, resistance to Co	95.97
PF12273	130	RCR: Chitin synthesis regulation, resistance to Co	90.43
PHA02909	72	hypothetical protein; Provisional	87.18
PRK13718	84	conjugal transfer protein TrbE; Provisional	80.97

>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls

Probab=95.97  E-value=0.0049  Score=48.23  Aligned_cols=36  Identities=28%  Similarity=0.600  Sum_probs=14.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhcccCCccccccc
Q psy12992        153 VFFLFIVIFLLLILLFFFIGLEQRRKNDNKSQMGSG  188 (319)
Q Consensus       153 vfflfiviflllillfffigleqrrkndnksqmgsg  188 (319)
                      |||++|||++||+|++|++--..||+.-..-..|.+
T Consensus         3 ~l~~iii~~i~l~~~~~~~~~rRR~r~G~~P~~gt~   38 (130)
T PF12273_consen    3 VLFAIIIVAILLFLFLFYCHNRRRRRRGLQPIYGTR   38 (130)
T ss_pred             eeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCce
Confidence            444444444443333333323333333344444443

Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].

>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls

Probab=90.43  E-value=0.16  Score=39.74  Aligned_cols=27  Identities=26%  Similarity=0.590  Sum_probs=21.3

Q ss_pred             HHHHHHHHHHHHHHHhhhhhhcccCCc
Q psy12992        156 LFIVIFLLLILLFFFIGLEQRRKNDNK  182 (319)
Q Consensus       156 lfiviflllillfffigleqrrkndnk  182 (319)
                      +|++||+++||||||+++--+|+...+
T Consensus         3 ~l~~iii~~i~l~~~~~~~~~rRR~r~   29 (130)
T PF12273_consen    3 VLFAIIIVAILLFLFLFYCHNRRRRRR   29 (130)
T ss_pred             eeHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            578888888888888888877776543

Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].

>PHA02909 hypothetical protein; Provisional

Probab=87.18  E-value=1.3  Score=34.65  Aligned_cols=53  Identities=32%  Similarity=0.681  Sum_probs=35.3

Q ss_pred             CceEEEEEee-eeEEEEeecceEEeehHHHHHHHHHHHH------HHHHHHHHHHHHHHH
Q psy12992        117 SSLVLSIVHT-DIRVVIKSHSWVIRVNFLVFIFLMRRVF------FLFIVIFLLLILLFF  169 (319)
Q Consensus       117 sslvlsivht-dirvvikshswvirvnflvfiflmrrvf------flfiviflllillff  169 (319)
                      .-|.||+-.. .-+|......+.|-|.|+.|..+.-..|      +.+|.|.+-||||||
T Consensus        11 nylmlsvdygngkkvyytentfcimvsfilfviiflsmftilacsyvyiaiiislillff   70 (72)
T PHA02909         11 NYLMLSVDYGNGKKVYYTENTFCIMVSFILFVIIFLSMFTILACSYVYIAIIISLILLFF   70 (72)
T ss_pred             CeEEEEEecCCCeEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3456665433 2456667788889999988765544444      356777788888887

>PRK13718 conjugal transfer protein TrbE; Provisional

Probab=80.97  E-value=2.5  Score=34.05  Aligned_cols=32  Identities=38%  Similarity=0.665  Sum_probs=24.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhcccCCcc
Q psy12992        152 RVFFLFIVIFLLLILLFFFIGLEQRRKNDNKS  183 (319)
Q Consensus       152 rvfflfiviflllillfffigleqrrkndnks  183 (319)
                      -+||++..-++++++.|||-.|+..++.|+++
T Consensus        46 a~~iI~~~gv~~~~ly~ffs~Ltkl~~~d~~k   77 (84)
T PRK13718         46 AVFVILYSGVLLFILYFFFSALTKLQKHDERK   77 (84)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHhccccc
Confidence            45555556678888999999999988888754

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	319
d2onkc1	252	f.58.1.1 (C:1-252) Molybdate/tungstate transport s	0.002

>d2onkc1 f.58.1.1 (C:1-252) Molybdate/tungstate transport system permease protein WtpB (ModB) {Archaeoglobus fulgidus [TaxId: 2234]} Length = 252

class: Membrane and cell surface proteins and peptides
fold: MetI-like
superfamily: MetI-like
family: MetI-like
domain: Molybdate/tungstate transport system permease protein WtpB (ModB)
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 36.5 bits (83), Expect = 0.002
 Identities = 7/22 (31%), Positives = 12/22 (54%)

Query: 150 MRRVFFLFIVIFLLLILLFFFI 171
           MR +F   + +   +ILLF  +
Sbjct: 1   MRLLFSALLALLSSIILLFVLL 22

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00