Psyllid ID: psy13017

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70----
Protein Sequence
MELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGVLGDTKMSPLSPGSPMVSTSS
Secondary Structure (PSIPRED)
cccHHHHHHHHcccEEEEEEEccEEccccccEEEEEEEcccccccEEEEEEEEEcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHcccEEEEEcccccEEccccEEEEEccccccccccEEEEEEEcccccccccccccccccccccc
Coil and Loop (DISEMBL)
melpahvkacflgssltipisdgklnlgMWQGIWLCehrdqagsrKLVVTLNGvlgdtkmsplspgspmvstss
Flexible Loop (DISEMBL)
MELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGVlgdtkmsplspgspmvstss
Low Complexity Region (SEG)
MELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGVLGDTKMSPLSPGSPMVSTSS
Disordered region (IsUnstruct)
*****HVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGVLG******************
Disordered Region (DISOPRED)
MELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGV********************
Disordered Region (DISEMBL)
MELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGVLGDTKMSP************
Disordered Region (DISPRO)
**LPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGVLG******************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGVLGDTKMSPLSPGSPMVSTSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	74	2.2.26 [Sep-21-2011]
P0A2L1	138	UPF0047 protein YjbQ OS=S	yes	N/A	0.702	0.376	0.519	4e-11
P0A2L2	138	UPF0047 protein YjbQ OS=S	N/A	N/A	0.702	0.376	0.519	4e-11
P0AF48	138	UPF0047 protein YjbQ OS=E	N/A	N/A	0.702	0.376	0.480	5e-11
P0AF49	138	UPF0047 protein YjbQ OS=E	N/A	N/A	0.702	0.376	0.480	5e-11
O14155	142	UPF0047 protein C4A8.02c	yes	N/A	0.716	0.373	0.528	8e-10
P74125	147	UPF0047 protein sll1880 O	N/A	N/A	0.702	0.353	0.403	1e-07
O28229	126	UPF0047 protein AF_2050 O	yes	N/A	0.594	0.349	0.444	0.0003

>sp|P0A2L1|YJBQ_SALTY UPF0047 protein YjbQ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=yjbQ PE=3 SV=1

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 37/52 (71%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
           ++P+H+K+  LG SL +P+  G+L LG WQGIWL EHR   G RK++ TL G
Sbjct: 86  DMPSHIKSSVLGVSLLLPVRQGRLQLGTWQGIWLGEHRIHGGPRKIIATLQG 137

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

>sp|P0A2L2|YJBQ_SALTI UPF0047 protein YjbQ OS=Salmonella typhi GN=yjbQ PE=3 SV=1

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 37/52 (71%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
           ++P+H+K+  LG SL +P+  G+L LG WQGIWL EHR   G RK++ TL G
Sbjct: 86  DMPSHIKSSVLGVSLLLPVRQGRLQLGTWQGIWLGEHRIHGGPRKIIATLQG 137

Salmonella typhi (taxid: 90370)

>sp|P0AF48|YJBQ_ECOLI UPF0047 protein YjbQ OS=Escherichia coli (strain K12) GN=yjbQ PE=3 SV=1

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 38/52 (73%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
           ++P+H+K+  LG+SL +P+  G++  G WQGIWL EHR   GSR+++ TL G
Sbjct: 86  DMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQG 137

Escherichia coli (strain K12) (taxid: 83333)

>sp|P0AF49|YJBQ_ECO57 UPF0047 protein YjbQ OS=Escherichia coli O157:H7 GN=yjbQ PE=3 SV=1

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 38/52 (73%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
           ++P+H+K+  LG+SL +P+  G++  G WQGIWL EHR   GSR+++ TL G
Sbjct: 86  DMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQG 137

Escherichia coli O157:H7 (taxid: 83334)

>sp|O14155|YE72_SCHPO UPF0047 protein C4A8.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4A8.02c PE=3 SV=1

 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 39/53 (73%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGV 54
           ++PAHVK+  +G SLT+PI++GKL+LG WQ I L E R Q  SR +V T+ G+
Sbjct: 87  DMPAHVKSSLIGPSLTVPITNGKLSLGTWQDIQLAEFRRQPHSRTIVCTIIGL 139

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P74125|Y1880_SYNY3 UPF0047 protein sll1880 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1880 PE=3 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 37/52 (71%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
           ++PAH+++    +S  IPI +G+L LG WQG++L EHR +   R+++V ++G
Sbjct: 94  DMPAHIRSALTKTSEHIPIVNGRLGLGTWQGVFLWEHRQRPHQREVIVHVSG 145

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|O28229|Y2050_ARCFU UPF0047 protein AF_2050 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_2050 PE=3 SV=1

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)

Query: 5   AHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVV 49
           AH+KA  LG+S+ +P+  GKL LG WQ I   E  D   +R+++V
Sbjct: 80  AHLKATLLGNSVVVPVESGKLALGTWQRILFLEF-DGPRTRRVIV 123

Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) (taxid: 224325)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	74
242022055	170	conserved hypothetical protein [Pediculu	0.986	0.429	0.808	5e-27
91088067	170	PREDICTED: similar to CG31688 CG31688-PA	0.986	0.429	0.767	2e-26
442628574	714	CG31688, isoform F [Drosophila melanogas	0.986	0.102	0.753	8e-26
198472707	859	GA16396 [Drosophila pseudoobscura pseudo	0.986	0.084	0.739	1e-25
157124718	358	hypothetical protein AaeL_AAEL001875 [Ae	0.986	0.203	0.753	2e-25
403182462	333	AAEL001875-PA [Aedes aegypti]	0.986	0.219	0.753	2e-25
195161539	646	GL26607 [Drosophila persimilis] gi|19410	0.986	0.113	0.739	2e-25
170028586	162	conserved hypothetical protein [Culex qu	0.986	0.450	0.753	3e-25
194878923	683	GG21233 [Drosophila erecta] gi|190657337	0.959	0.103	0.746	6e-25
442628572	204	CG31688, isoform E [Drosophila melanogas	0.986	0.357	0.753	7e-25

>gi|242022055|ref|XP_002431457.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212516745|gb|EEB18719.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  124 bits (312), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 59/73 (80%), Positives = 65/73 (89%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGVLGDTKMS 61
           ++PAHVKACFLGSSLTIPI+DGKLNLG WQGIWLCEHRD AGSRK+VVT+NG L D+  S
Sbjct: 98  DMPAHVKACFLGSSLTIPITDGKLNLGSWQGIWLCEHRDHAGSRKVVVTVNGNLRDSSRS 157

Query: 62  PLSPGSPMVSTSS 74
           PLSP SPM STSS
Sbjct: 158 PLSPVSPMASTSS 170

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91088067|ref|XP_967758.1| PREDICTED: similar to CG31688 CG31688-PA [Tribolium castaneum] gi|270011871|gb|EFA08319.1| hypothetical protein TcasGA2_TC005961 [Tribolium castaneum]

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 56/73 (76%), Positives = 64/73 (87%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGVLGDTKMS 61
           ++PAHVKACFLGSSLTIPI++GKLNLG WQG+WLCEHRD AGSRKL++TLNG L D   +
Sbjct: 98  DMPAHVKACFLGSSLTIPITEGKLNLGTWQGVWLCEHRDHAGSRKLLITLNGCLRDATCT 157

Query: 62  PLSPGSPMVSTSS 74
           PLSP SPM STSS
Sbjct: 158 PLSPVSPMASTSS 170

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442628574|ref|NP_610035.4| CG31688, isoform F [Drosophila melanogaster] gi|440213988|gb|AAF53896.5| CG31688, isoform F [Drosophila melanogaster]

 Score =  120 bits (302), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 55/73 (75%), Positives = 63/73 (86%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGVLGDTKMS 61
           ++PAHVKACFLGSSLTIPI+DGKL+LG WQG+WLCEHRDQAGSRKLV+TL G   +   S
Sbjct: 121 DMPAHVKACFLGSSLTIPITDGKLSLGTWQGVWLCEHRDQAGSRKLVITLTGCPREQARS 180

Query: 62  PLSPGSPMVSTSS 74
           PLSP SP+ STSS
Sbjct: 181 PLSPVSPIASTSS 193

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198472707|ref|XP_001356038.2| GA16396 [Drosophila pseudoobscura pseudoobscura] gi|198139125|gb|EAL33097.2| GA16396 [Drosophila pseudoobscura pseudoobscura]

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/73 (73%), Positives = 63/73 (86%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGVLGDTKMS 61
           ++PAHVKACFLGSSLTIPI+DGKL+LG WQG+WLCEHRDQAGSRKLV+TL G   +   S
Sbjct: 241 DMPAHVKACFLGSSLTIPITDGKLSLGTWQGVWLCEHRDQAGSRKLVITLTGCPREQARS 300

Query: 62  PLSPGSPMVSTSS 74
           PLSP SP+ STS+
Sbjct: 301 PLSPVSPIASTST 313

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157124718|ref|XP_001654169.1| hypothetical protein AaeL_AAEL001875 [Aedes aegypti]

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/73 (75%), Positives = 64/73 (87%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGVLGDTKMS 61
           ++PAHVKACFLGSSLTIPI+DGKL+LG WQG+WLCEHRD AGSRKLV+TL+G   D+  S
Sbjct: 286 DMPAHVKACFLGSSLTIPITDGKLSLGTWQGVWLCEHRDHAGSRKLVITLSGCPRDSARS 345

Query: 62  PLSPGSPMVSTSS 74
           PLSP SP+ STSS
Sbjct: 346 PLSPVSPIASTSS 358

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|403182462|gb|EAT47023.2| AAEL001875-PA [Aedes aegypti]

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/73 (75%), Positives = 64/73 (87%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGVLGDTKMS 61
           ++PAHVKACFLGSSLTIPI+DGKL+LG WQG+WLCEHRD AGSRKLV+TL+G   D+  S
Sbjct: 261 DMPAHVKACFLGSSLTIPITDGKLSLGTWQGVWLCEHRDHAGSRKLVITLSGCPRDSARS 320

Query: 62  PLSPGSPMVSTSS 74
           PLSP SP+ STSS
Sbjct: 321 PLSPVSPIASTSS 333

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195161539|ref|XP_002021620.1| GL26607 [Drosophila persimilis] gi|194103420|gb|EDW25463.1| GL26607 [Drosophila persimilis]

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 54/73 (73%), Positives = 63/73 (86%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGVLGDTKMS 61
           ++PAHVKACFLGSSLTIPI+DGKL+LG WQG+WLCEHRDQAGSRKLV+TL G   +   S
Sbjct: 273 DMPAHVKACFLGSSLTIPITDGKLSLGTWQGVWLCEHRDQAGSRKLVITLTGCPREQARS 332

Query: 62  PLSPGSPMVSTSS 74
           PLSP SP+ STS+
Sbjct: 333 PLSPVSPIASTST 345

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170028586|ref|XP_001842176.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167876298|gb|EDS39681.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 55/73 (75%), Positives = 64/73 (87%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGVLGDTKMS 61
           ++PAHVKACFLGSSLTIPI+DGKL+LG WQG+WLCEHRD AGSRKLV+TL+G   D+  S
Sbjct: 90  DMPAHVKACFLGSSLTIPITDGKLSLGTWQGVWLCEHRDHAGSRKLVITLSGCPRDSARS 149

Query: 62  PLSPGSPMVSTSS 74
           PLSP SP+ STSS
Sbjct: 150 PLSPVSPIASTSS 162

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194878923|ref|XP_001974150.1| GG21233 [Drosophila erecta] gi|190657337|gb|EDV54550.1| GG21233 [Drosophila erecta]

 Score =  117 bits (294), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 53/71 (74%), Positives = 61/71 (85%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGVLGDTKMS 61
           ++PAHVKACFLGSSLTIPI+DGKL+LG WQG+WLCEHRDQAGSRKLV+TL G   +   S
Sbjct: 121 DMPAHVKACFLGSSLTIPITDGKLSLGTWQGVWLCEHRDQAGSRKLVITLTGCPREQARS 180

Query: 62  PLSPGSPMVST 72
           PLSP SP+ ST
Sbjct: 181 PLSPVSPIAST 191

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442628572|ref|NP_001260624.1| CG31688, isoform E [Drosophila melanogaster] gi|440213987|gb|AGB93159.1| CG31688, isoform E [Drosophila melanogaster]

 Score =  117 bits (294), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 55/73 (75%), Positives = 63/73 (86%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGVLGDTKMS 61
           ++PAHVKACFLGSSLTIPI+DGKL+LG WQG+WLCEHRDQAGSRKLV+TL G   +   S
Sbjct: 121 DMPAHVKACFLGSSLTIPITDGKLSLGTWQGVWLCEHRDQAGSRKLVITLTGCPREQARS 180

Query: 62  PLSPGSPMVSTSS 74
           PLSP SP+ STSS
Sbjct: 181 PLSPVSPIASTSS 193

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	74
FB|FBgn0263355	687	CG31688 [Drosophila melanogast	0.959	0.103	0.746	1.2e-24
TAIR|locus:505006137	217	AT1G21065 "AT1G21065" [Arabido	0.716	0.244	0.603	2e-15
UNIPROTKB|Q47W13	139	CPS_4360 "Putative uncharacter	0.702	0.374	0.596	3e-14
TIGR_CMR|CPS_4360	139	CPS_4360 "conserved hypothetic	0.702	0.374	0.596	3e-14
UNIPROTKB|Q4K3V7	141	PFL_6018 "Secondary thiamine-p	0.702	0.368	0.557	9.1e-13
UNIPROTKB|Q60BB8	139	MCA0559 "Putative uncharacteri	0.702	0.374	0.557	9.1e-13
UNIPROTKB|Q48C07	141	PSPPH_5002 "Uncharacterized pr	0.702	0.368	0.557	1e-11
UNIPROTKB|Q88B14	141	PSPTO_0219 "Uncharacterized pr	0.702	0.368	0.557	1.7e-11
UNIPROTKB|Q9KUY5	139	VC_0373 "Putative uncharacteri	0.702	0.374	0.5	2.2e-11
TIGR_CMR|VC_0373	139	VC_0373 "conserved hypothetica	0.702	0.374	0.5	2.2e-11

FB|FBgn0263355 CG31688 [Drosophila melanogaster (taxid:7227)]

 Score = 290 (107.1 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 53/71 (74%), Positives = 61/71 (85%)

Query:     2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGVLGDTKMS 61
             ++PAHVKACFLGSSLTIPI+DGKL+LG WQG+WLCEHRDQAGSRKLV+TL G   +   S
Sbjct:   121 DMPAHVKACFLGSSLTIPITDGKLSLGTWQGVWLCEHRDQAGSRKLVITLTGCPREQARS 180

Query:    62 PLSPGSPMVST 72
             PLSP SP+ ST
Sbjct:   181 PLSPVSPIAST 191

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

TAIR|locus:505006137 AT1G21065 "AT1G21065" [Arabidopsis thaliana (taxid:3702)]

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 32/53 (60%), Positives = 43/53 (81%)

Query:     2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGV 54
             ++PAH+K+   G  LTIPI+ GKL++G WQGIWLCEHRD   +R++VVTLNG+
Sbjct:   165 DMPAHIKSSMFGCQLTIPITKGKLSMGTWQGIWLCEHRDAPTARRVVVTLNGI 217

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

UNIPROTKB|Q47W13 CPS_4360 "Putative uncharacterized protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 31/52 (59%), Positives = 44/52 (84%)

Query:     2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
             ++PAH+KA  LG+SL++PIS G+LN+G+WQGI+L EHRD A +R +V T+NG
Sbjct:    87 DMPAHIKASLLGNSLSLPISHGQLNIGIWQGIYLGEHRDHASNRTIVATING 138

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CPS_4360 CPS_4360 "conserved hypothetical protein TIGR00149" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 31/52 (59%), Positives = 44/52 (84%)

Query:     2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
             ++PAH+KA  LG+SL++PIS G+LN+G+WQGI+L EHRD A +R +V T+NG
Sbjct:    87 DMPAHIKASLLGNSLSLPISHGQLNIGIWQGIYLGEHRDHASNRTIVATING 138

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q4K3V7 PFL_6018 "Secondary thiamine-phosphate synthase enzyme" [Pseudomonas protegens Pf-5 (taxid:220664)]

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 29/52 (55%), Positives = 41/52 (78%)

Query:     2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
             +LPAH KA  LG  LT+P++ G+L LG+WQG++L EHRD  G+RK++ TL+G
Sbjct:    87 DLPAHFKASLLGCQLTLPVAAGRLALGIWQGVYLGEHRDHGGARKVLATLHG 138

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q60BB8 MCA0559 "Putative uncharacterized protein" [Methylococcus capsulatus str. Bath (taxid:243233)]

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 29/52 (55%), Positives = 41/52 (78%)

Query:     2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
             ++PAH+KA  +G+S+T+P+  G+L LG WQGI+L EHR+  GSR LV TL+G
Sbjct:    87 DMPAHIKAVLVGNSVTVPLRQGRLALGTWQGIYLGEHRNHGGSRSLVATLHG 138

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q48C07 PSPPH_5002 "Uncharacterized protein" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)]

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 29/52 (55%), Positives = 37/52 (71%)

Query:     2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
             +LPAH KA  LG  L +P++ G+L LG WQGI+L EHRD  GSR ++ TL G
Sbjct:    87 DLPAHFKASLLGCQLVLPVTAGRLALGTWQGIYLGEHRDAGGSRNVLATLQG 138

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q88B14 PSPTO_0219 "Uncharacterized protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)]

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 29/52 (55%), Positives = 37/52 (71%)

Query:     2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
             +LPAH KA  LG  L +P++ G+L LG WQGI+L EHRD  GSR ++ TL G
Sbjct:    87 DLPAHFKASLLGCQLFLPVTAGRLALGTWQGIYLGEHRDAGGSRNVLATLQG 138

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q9KUY5 VC_0373 "Putative uncharacterized protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 26/52 (50%), Positives = 39/52 (75%)

Query:     2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
             ++PAH+K+  LG S++IPI  G+L LG WQGI+L EHR+  G R+++ T+ G
Sbjct:    87 DMPAHIKSSLLGCSVSIPIQQGRLALGTWQGIYLGEHRNHGGIRRVIATIQG 138

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|VC_0373 VC_0373 "conserved hypothetical protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 26/52 (50%), Positives = 39/52 (75%)

Query:     2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
             ++PAH+K+  LG S++IPI  G+L LG WQGI+L EHR+  G R+++ T+ G
Sbjct:    87 DMPAHIKSSLLGCSVSIPIQQGRLALGTWQGIYLGEHRNHGGIRRVIATIQG 138

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O14155	YE72_SCHPO	No assigned EC number	0.5283	0.7162	0.3732	yes	N/A
P0A2L1	YJBQ_SALTY	No assigned EC number	0.5192	0.7027	0.3768	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	74
pfam01894	118	pfam01894, UPF0047, Uncharacterized protein family	8e-23
COG0432	137	COG0432, COG0432, Uncharacterized conserved protei	2e-21
TIGR00149	132	TIGR00149, TIGR00149_YjbQ, secondary thiamine-phos	8e-16

>gnl|CDD|216769 pfam01894, UPF0047, Uncharacterized protein family UPF0047

 Score = 83.3 bits (207), Expect = 8e-23
 Identities = 26/49 (53%), Positives = 37/49 (75%), Gaps = 1/49 (2%)

Query: 4   PAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLN 52
           PAH+K+  LG SLT+P+++G+L LG WQGI+LCE      SR++VVT+ 
Sbjct: 71  PAHLKSSLLGPSLTVPVTNGRLALGTWQGIYLCEFDG-PRSRRVVVTIL 118

This family has no known function. The alignment contains a conserved aspartate and histidine that may be functionally important. Length = 118

>gnl|CDD|223509 COG0432, COG0432, Uncharacterized conserved protein [Function unknown]

 Score = 80.3 bits (199), Expect = 2e-21
 Identities = 26/50 (52%), Positives = 34/50 (68%)

Query: 4   PAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
           PAH+KA  LG SLTIP+ +G+L LG WQGI+L E       R++VV + G
Sbjct: 88  PAHLKASLLGPSLTIPVINGRLVLGTWQGIFLVEFDGPRHRRRVVVKIIG 137

Length = 137

>gnl|CDD|129253 TIGR00149, TIGR00149_YjbQ, secondary thiamine-phosphate synthase enzyme

 Score = 65.9 bits (161), Expect = 8e-16
 Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 1/50 (2%)

Query: 4   PAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
            AH+K+  LG+S  +P+ +G+L LG WQGI+  E  D   +R+++V + G
Sbjct: 83  DAHIKSSLLGTSQHVPVENGRLQLGTWQGIFFAEF-DGPRTRRIIVKVQG 131

Members of this protein family have been studied extensively by crystallography. Members from several different species have been shown to have sufficient thiamin phosphate synthase activity (EC 2.5.1.3) to complement thiE mutants. However, it is presumed that this is a secondary activity, and the primary function of this enzyme remains unknown [Unknown function, Enzymes of unknown specificity]. Length = 132

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	74
TIGR00149	132	TIGR00149_YbjQ secondary thiamine-phosphate syntha	99.94
PF01894	118	UPF0047: Uncharacterised protein family UPF0047; I	99.94
COG0432	137	Uncharacterized conserved protein [Function unknow	99.93
KOG3267|consensus	138		99.84

>TIGR00149 TIGR00149_YbjQ secondary thiamine-phosphate synthase enzyme

Probab=99.94  E-value=2e-27  Score=161.50  Aligned_cols=52  Identities=37%  Similarity=0.859  Sum_probs=50.5

Q ss_pred             CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCCceEEEEEEecc
Q psy13017          2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGV   54 (74)
Q Consensus         2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr~R~v~v~v~Ge   54 (74)
                      |++|||||+|+|+|++|||.||+|.||+||+|||+||| +||+|+|+|+++||
T Consensus        81 n~~aHlka~L~G~s~tipi~dG~L~LGtwQ~I~l~E~D-g~r~R~v~v~i~Ge  132 (132)
T TIGR00149        81 NMDAHIKSSLLGTSQHVPVENGRLQLGTWQGIFFAEFD-GPRTRRIIVKVQGE  132 (132)
T ss_pred             CHHHHHHHHhcCccEEEEEeCCEEcccCccEEEEEECC-CCCCcEEEEEEEeC
Confidence            89999999999999999999999999999999999998 89999999999997

Members of this protein family have been studied extensively by crystallography. Members from several different species have been shown to have sufficient thiamin phosphate synthase activity (EC 2.5.1.3) to complement thiE mutants. However, it is presumed that this is a secondary activity, and the primary function of this enzyme remains unknown.

>PF01894 UPF0047: Uncharacterised protein family UPF0047; InterPro: IPR001602 This family contains small uncharacterised proteins of 14 to 16 kDa mainly from bacteria although the signatures also occur in a hypothetical protein from archaea and from yeast

Probab=99.94  E-value=6.1e-27  Score=156.50  Aligned_cols=50  Identities=48%  Similarity=0.903  Sum_probs=43.9

Q ss_pred             CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCCceEEEEEEe
Q psy13017          2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLN   52 (74)
Q Consensus         2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr~R~v~v~v~   52 (74)
                      |++||+||+|+|+|++|||.||+|.||+||+|||+||| +||+|+|+++++
T Consensus        69 n~~aHlks~l~G~S~~vpv~~G~L~LGtwQ~I~l~E~d-gpr~R~v~v~i~  118 (118)
T PF01894_consen   69 NAPAHLKSSLIGPSLTVPVHDGKLALGTWQGIYLVEFD-GPRERTVVVQIM  118 (118)
T ss_dssp             THHHHHHHHHH-SEEEEEEETTEE---TTEEEEEEESS--SSEEEEEEEEE
T ss_pred             CccHHHHHHhcCCeEEEEEECCEEccCCcCEEEEEECC-CCCeEEEEEEEC
Confidence            89999999999999999999999999999999999998 599999999986

; PDB: 1VPH_E 2P6C_A 2CU5_A 1VMJ_A 1XBF_B 1VMH_A 1VE0_A 2P6H_B 1VMF_C.

>COG0432 Uncharacterized conserved protein [Function unknown]

Probab=99.93  E-value=2e-26  Score=158.69  Aligned_cols=52  Identities=50%  Similarity=0.896  Sum_probs=48.4

Q ss_pred             CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCCceEEEEEEec
Q psy13017          2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG   53 (74)
Q Consensus         2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr~R~v~v~v~G   53 (74)
                      ||+|||||+|+|+|++|||.||+|.|||||+|||+|||++++.|+|+++++|
T Consensus        86 n~~aHlkasllG~S~~iPv~~GrL~LGTWQ~I~~~E~dg~r~~R~v~v~i~g  137 (137)
T COG0432          86 NAPAHLKASLLGPSLTIPVINGRLVLGTWQGIFLVEFDGPRHRRRVVVKIIG  137 (137)
T ss_pred             chHHHHHHHhcCceEEEEEeCCeEceecccEEEEEEecCCCCccEEEEEEcC
Confidence            8999999999999999999999999999999999999854444999999987

>KOG3267|consensus

Probab=99.84  E-value=1.4e-21  Score=133.40  Aligned_cols=52  Identities=50%  Similarity=0.941  Sum_probs=51.1

Q ss_pred             CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCCceEEEEEEec
Q psy13017          2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG   53 (74)
Q Consensus         2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr~R~v~v~v~G   53 (74)
                      ||+||+||+|+|++++|||.+|+|.|||||+|+|+||++.|..|+|+++++|
T Consensus        86 dmpahikssl~g~qltipit~gklslgtwq~i~l~e~r~~p~ar~iv~ti~g  137 (138)
T KOG3267|consen   86 DMPAHIKSSLFGCQLTIPITKGKLSLGTWQDIQLAEFRDAPHARRIVCTIIG  137 (138)
T ss_pred             cchhhhhhccccceEEEEeccCeecccccccchhhhhhcCCcccEEEEEEec
Confidence            8999999999999999999999999999999999999999999999999987

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	74
1vmf_A	145	Crystal Structure Of A Ybjq-Like Fold Protein Of Un		2e-06
1vmh_A	144	Crystal Structure Of An Uncharacterized Conserved P		2e-06
1xbf_A	140	X-Ray Structure Northeast Structural Genomics Conso		6e-06
1vph_A	149	Crystal Structure Of A Ybjq-Like Protein Of Unknown		3e-04
1ve0_A	134	Crystal Structure Of Uncharacterized Protein St2072		6e-04

>pdb|1VMF|A Chain A, Crystal Structure Of A Ybjq-Like Fold Protein Of Unknown Function (Bh3498) From Bacillus Halodurans At 1.46 A Resolution Length = 145

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 4   PAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTL 51
            AH+K   +G + T+ IS+G+L LG WQG++ CE      +RK VV L
Sbjct: 95  AAHLKTSTVGHAQTLIISEGRLVLGTWQGVYFCEFDGPRTNRKFVVKL 142

>pdb|1VMH|A Chain A, Crystal Structure Of An Uncharacterized Conserved Protein YjbqUPF0047 Family, Ortholog Yugu B.Subtilis (Ca_c0907) From Clostridium Acetobutylicum At 1.31 A Resolution Length = 144

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 5   AHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTL 51
           AH+KA  +GSS  I I +GKL LG WQGI+  E  D    RK+ V +
Sbjct: 98  AHIKASLMGSSQQIIIENGKLKLGTWQGIYFTEF-DGPRDRKVFVKI 143

>pdb|1XBF|A Chain A, X-Ray Structure Northeast Structural Genomics Consortium Target Car10 From C. Acetobutylicum Length = 140

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 5   AHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTL 51
           AH+KA   GSS  I I +GKL LG WQGI+  E  D    RK+ V +
Sbjct: 86  AHIKASLXGSSQQIIIENGKLKLGTWQGIYFTEF-DGPRDRKVFVKI 131

>pdb|1VPH|A Chain A, Crystal Structure Of A Ybjq-Like Protein Of Unknown Function (Sso2532) From Sulfolobus Solfataricus P2 At 1.76 A Resolution Length = 149

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 5   AHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
           AH+ A FLG+    P+ +GKL  G WQ I+L E       R + V + G
Sbjct: 100 AHLGATFLGAERVFPVREGKLVRGTWQNIFLVELDGPRSERHITVEILG 148

>pdb|1VE0|A Chain A, Crystal Structure Of Uncharacterized Protein St2072 From Sulfolobus Tokodaii Length = 134

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 5   AHVKACFLGSSLTIPISDGKLNLGMWQGIWLCE 37
           AHV +  +G+S  +PI +GKL+LG WQ I L E
Sbjct: 86  AHVISAIIGNSRVVPIIEGKLDLGTWQRIILLE 118

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	74
1vmf_A	145	Hypothetical protein; structural genomics, joint c	1e-19
1vph_A	149	Hypothetical protein SSO2532; YBJQ-like fold, stru	3e-19
1vmj_A	151	Hypothetical protein TM0723; putative thiamin phos	1e-18
2cu5_A	129	Conserved hypothetical protein TT1486; thermus the	4e-18
1ve0_A	134	Hypothetical protein (ST2072); structural genomics	6e-18
2p6h_A	134	Hypothetical protein; structural genomics, unknown	6e-18
2p6c_A	137	AQ_2013 protein; NPPSFA, national project on prote	1e-17
1vmh_A	144	Uncharacterized conserved protein YJBQ/UPF0047 FA	1e-17

>1vmf_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, unknown function; HET: EPE; 1.46A {Bacillus halodurans} SCOP: d.273.1.1 Length = 145

 Score = 75.9 bits (186), Expect = 1e-19
 Identities = 21/52 (40%), Positives = 30/52 (57%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
              AH+K   +G + T+ IS+G+L LG WQG++ CE      +RK VV L  
Sbjct: 93  NTAAHLKTSTVGHAQTLIISEGRLVLGTWQGVYFCEFDGPRTNRKFVVKLLT 144

>1vph_A Hypothetical protein SSO2532; YBJQ-like fold, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; 1.76A {Sulfolobus solfataricus} SCOP: d.273.1.1 Length = 149

 Score = 74.8 bits (183), Expect = 3e-19
 Identities = 19/52 (36%), Positives = 26/52 (50%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
              AH+ A FLG+    P+ +GKL  G WQ I+L E       R + V + G
Sbjct: 97  NAHAHLGATFLGAERVFPVREGKLVRGTWQNIFLVELDGPRSERHITVEILG 148

>1vmj_A Hypothetical protein TM0723; putative thiamin phosphate synthase, structural genomics, JO center for structural genomics, JCSG; 1.52A {Thermotoga maritima} SCOP: d.273.1.1 Length = 151

 Score = 73.2 bits (179), Expect = 1e-18
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
              AH+K   +G  + I I+D K++LG W+ ++  E  D    ++++V + G
Sbjct: 100 NADAHLKRTIMGREVVIAITDRKMDLGPWEQVFYGEF-DGMRPKRVLVKIIG 150

>2cu5_A Conserved hypothetical protein TT1486; thermus thermophilus HB8, ST genomics, riken structural genomics/proteomics initiative; 1.84A {Thermus thermophilus} Length = 129

 Score = 71.3 bits (174), Expect = 4e-18
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTL 51
              AH+K+   G  L +    G+L LG WQ ++L E  D    R++ V L
Sbjct: 80  NSHAHLKSLLTGVHLLLLAEKGRLRLGRWQQVFLAEF-DGPRVREVWVRL 128

>1ve0_A Hypothetical protein (ST2072); structural genomics, zinc binding protein, metal binding Pro; 2.00A {Sulfolobus tokodaii} Length = 134

 Score = 70.9 bits (173), Expect = 6e-18
 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 1   MELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
               AHV +  +G+S  +PI +GKL+LG WQ I L E  D   +R ++V   G
Sbjct: 82  NNGHAHVISAIIGNSRVVPIIEGKLDLGTWQRIILLEF-DGPRTRTVLVKSMG 133

>2p6h_A Hypothetical protein; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.95A {Aeropyrum pernix} Length = 134

 Score = 70.9 bits (173), Expect = 6e-18
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 1   MELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
           +   AH+    +G S  IP+  G+L+LG WQ I   E  D    R + +   G
Sbjct: 82  VNAHAHLGNTIIGDSRVIPVVGGRLSLGTWQRILFVEM-DGPRERTVNLLYLG 133

>2p6c_A AQ_2013 protein; NPPSFA, national project on protein structural and functiona analyses, riken structural genomics/proteomics initiative; 2.00A {Aquifex aeolicus} Length = 137

 Score = 70.1 bits (171), Expect = 1e-17
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
              AH+K       + +PI++GKL+LG WQ I+  E  D    +++V+ + G
Sbjct: 86  NGDAHLKNLLTHLQVVLPITNGKLDLGPWQEIFYAEF-DGQRPKRVVIKIIG 136

>1vmh_A Uncharacterized conserved protein YJBQ/UPF0047 FA ortholog YUGU B.subtilis; YJBQ-like fold, structural genomics; 1.31A {Clostridium acetobutylicum} SCOP: d.273.1.1 PDB: 1xbf_A Length = 144

 Score = 70.5 bits (172), Expect = 1e-17
 Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 2   ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTL 51
              AH+KA  +GSS  I I +GKL LG WQGI+  E  D    RK+ V +
Sbjct: 95  NSHAHIKASLMGSSQQIIIENGKLKLGTWQGIYFTEF-DGPRDRKVFVKI 143

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	74
2p6h_A	134	Hypothetical protein; structural genomics, unknown	99.95
1ve0_A	134	Hypothetical protein (ST2072); structural genomics	99.95
2p6c_A	137	AQ_2013 protein; NPPSFA, national project on prote	99.95
1vmj_A	151	Hypothetical protein TM0723; putative thiamin phos	99.94
1vmf_A	145	Hypothetical protein; structural genomics, joint c	99.94
1vph_A	149	Hypothetical protein SSO2532; YBJQ-like fold, stru	99.94
2cu5_A	129	Conserved hypothetical protein TT1486; thermus the	99.94
1vmh_A	144	Uncharacterized conserved protein YJBQ/UPF0047 FA	99.93

>2p6h_A Hypothetical protein; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.95A {Aeropyrum pernix}

Probab=99.95  E-value=2e-28  Score=165.78  Aligned_cols=52  Identities=31%  Similarity=0.540  Sum_probs=50.5

Q ss_pred             CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCCceEEEEEEecc
Q psy13017          2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGV   54 (74)
Q Consensus         2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr~R~v~v~v~Ge   54 (74)
                      ||+|||||+|+|+|++|||.||+|.|||||+||||||| +||+|+|+++++||
T Consensus        83 n~~AHiks~l~G~s~tipv~~G~L~LGtWQ~Iyl~E~d-g~r~R~v~v~i~Ge  134 (134)
T 2p6h_A           83 NAHAHLGNTIIGDSRVIPVVGGRLSLGTWQRILFVEMD-GPRERTVNLLYLGE  134 (134)
T ss_dssp             CHHHHHHHHHHCSEEEEEEETTEECCCTTCEEEEEESS-CSCEEEEEEEEEEC
T ss_pred             CHHHhhhhhhcCCeEEEEEECCEECcCCCceEEEEECC-CCCceEEEEEEecC
Confidence            89999999999999999999999999999999999997 79999999999996

>1ve0_A Hypothetical protein (ST2072); structural genomics, zinc binding protein, metal binding Pro; 2.00A {Sulfolobus tokodaii}

Probab=99.95  E-value=2.7e-28  Score=165.09  Aligned_cols=52  Identities=38%  Similarity=0.613  Sum_probs=50.4

Q ss_pred             CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCCceEEEEEEecc
Q psy13017          2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGV   54 (74)
Q Consensus         2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr~R~v~v~v~Ge   54 (74)
                      ||+|||||+|+|+|++|||.||+|.|||||+||||||| +||+|+|+++++||
T Consensus        83 n~~AHiks~l~G~s~tipV~~G~L~LGtWQ~Iyl~E~d-g~r~R~v~v~i~Ge  134 (134)
T 1ve0_A           83 NGHAHVISAIIGNSRVVPIIEGKLDLGTWQRIILLEFD-GPRTRTVLVKSMGE  134 (134)
T ss_dssp             CHHHHHHHHHHCSEEEEEEETTEECCCTTCEEEEEESS-CSCEEEEEEEEEEC
T ss_pred             ChHHhhhhhccCCcEEEEEECCEeccCCCcEEEEEECC-CCCeeEEEEEEecC
Confidence            89999999999999999999999999999999999996 78999999999996

>2p6c_A AQ_2013 protein; NPPSFA, national project on protein structural and functiona analyses, riken structural genomics/proteomics initiative; 2.00A {Aquifex aeolicus}

Probab=99.95  E-value=3.1e-28  Score=165.29  Aligned_cols=52  Identities=31%  Similarity=0.597  Sum_probs=50.6

Q ss_pred             CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCCceEEEEEEecc
Q psy13017          2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGV   54 (74)
Q Consensus         2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr~R~v~v~v~Ge   54 (74)
                      ||+|||||+|+|+|++|||.||+|.|||||+||||||| +||+|+|+++++||
T Consensus        86 n~~AHiks~l~G~s~tipv~~G~L~LGtWQ~Iyl~E~d-g~r~R~v~v~i~Ge  137 (137)
T 2p6c_A           86 NGDAHLKNLLTHLQVVLPITNGKLDLGPWQEIFYAEFD-GQRPKRVVIKIIGE  137 (137)
T ss_dssp             CHHHHHHHHHHCSEEEEEECSSSBCCCSSCEEEEEESS-CSSCEEEEEEEEEC
T ss_pred             CHHHhhhhheeCCeEEEEEECCEECcCCCceEEEEECC-CCCccEEEEEEecC
Confidence            89999999999999999999999999999999999998 78999999999996

>1vmj_A Hypothetical protein TM0723; putative thiamin phosphate synthase, structural genomics, JO center for structural genomics, JCSG; 1.52A {Thermotoga maritima} SCOP: d.273.1.1

Probab=99.94  E-value=7.6e-28  Score=166.15  Aligned_cols=52  Identities=27%  Similarity=0.585  Sum_probs=50.6

Q ss_pred             CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCCceEEEEEEecc
Q psy13017          2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGV   54 (74)
Q Consensus         2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr~R~v~v~v~Ge   54 (74)
                      ||+|||||+|+|+|++|||.||+|.|||||+||||||| +||+|+|+++++||
T Consensus       100 n~~AHiKssL~G~S~tiPV~~GrL~LGtWQgIyl~E~d-g~r~R~V~v~i~Ge  151 (151)
T 1vmj_A          100 NADAHLKRTIMGREVVIAITDRKMDLGPWEQVFYGEFD-GMRPKRVLVKIIGE  151 (151)
T ss_dssp             CHHHHHHHHHHCSEEEEEEETTEECCCTTCEEEEEESS-CSSCEEEEEEEEEC
T ss_pred             chHhhhhhhhcCCeEEEEEECCEECcCCCcEEEEEECC-CCCeeEEEEEEecC
Confidence            89999999999999999999999999999999999996 89999999999996

>1vmf_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, unknown function; HET: EPE; 1.46A {Bacillus halodurans} SCOP: d.273.1.1

Probab=99.94  E-value=9.6e-28  Score=164.86  Aligned_cols=52  Identities=40%  Similarity=0.722  Sum_probs=50.3

Q ss_pred             CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCC-ceEEEEEEecc
Q psy13017          2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAG-SRKLVVTLNGV   54 (74)
Q Consensus         2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr-~R~v~v~v~Ge   54 (74)
                      ||+|||||+|+|+|++|||.||+|.|||||+||||||| +|| +|+|+++++||
T Consensus        93 n~~AHiKssL~G~S~tiPV~~GrL~LGtWQgIyl~E~d-gpr~~R~v~v~i~Ge  145 (145)
T 1vmf_A           93 NTAAHLKTSTVGHAQTLIISEGRLVLGTWQGVYFCEFD-GPRTNRKFVVKLLTD  145 (145)
T ss_dssp             CHHHHHHHHHHCSEEEEEEETTEECCCTTEEEEEEESS-CCCSCEEEEEEEEEC
T ss_pred             CHHHHHHHHhhCCeEEEEEECCEEccCCCceEEEEECc-CCCCCcEEEEEEecC
Confidence            89999999999999999999999999999999999998 788 89999999996

>1vph_A Hypothetical protein SSO2532; YBJQ-like fold, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; 1.76A {Sulfolobus solfataricus} SCOP: d.273.1.1

Probab=99.94  E-value=2.9e-27  Score=163.05  Aligned_cols=52  Identities=37%  Similarity=0.645  Sum_probs=49.6

Q ss_pred             CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCC-ceEEEEEEecc
Q psy13017          2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAG-SRKLVVTLNGV   54 (74)
Q Consensus         2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr-~R~v~v~v~Ge   54 (74)
                      ||+|||||+|+|+|++|||.||+|.|||||+||||||| ++| +|+|+++++||
T Consensus        97 n~~AHiKssL~G~S~tiPV~~G~L~LGtWQgIyl~E~d-g~r~~R~v~v~i~Ge  149 (149)
T 1vph_A           97 NAHAHLGATFLGAERVFPVREGKLVRGTWQNIFLVELD-GPRSERHITVEILGE  149 (149)
T ss_dssp             CHHHHHHHHHHCSEEEEEEETTEECCCTTCEEEEEESS-CCEEEEEEEEEEEEC
T ss_pred             CHHHhhhhhhcCCeEEEEEECCEECcCCCcEEEEEECC-CCCCCeEEEEEEecC
Confidence            89999999999999999999999999999999999998 565 89999999996

>2cu5_A Conserved hypothetical protein TT1486; thermus thermophilus HB8, ST genomics, riken structural genomics/proteomics initiative; 1.84A {Thermus thermophilus}

Probab=99.94  E-value=3.4e-27  Score=159.23  Aligned_cols=50  Identities=32%  Similarity=0.529  Sum_probs=48.2

Q ss_pred             CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCCceEEEEEEe
Q psy13017          2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLN   52 (74)
Q Consensus         2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr~R~v~v~v~   52 (74)
                      ||+|||||+|+|+|++|||.||+|.|||||+||||||| +||+|+|+++++
T Consensus        80 n~~AHiks~L~G~s~tiPV~~G~L~LGtWQ~Iyl~E~d-g~r~R~v~v~i~  129 (129)
T 2cu5_A           80 NSHAHLKSLLTGVHLLLLAEKGRLRLGRWQQVFLAEFD-GPRVREVWVRLL  129 (129)
T ss_dssp             CHHHHHHHHHHCSEEEEEEETTEECCCTTCEEEEEESS-CSEEEEEEEEEC
T ss_pred             CHHHHHHHHhhCCeEEEEEECCEECcCCCcEEEEEECC-CCceeEEEEEEC
Confidence            89999999999999999999999999999999999997 899999999985

>1vmh_A Uncharacterized conserved protein YJBQ/UPF0047 FA ortholog YUGU B.subtilis; YJBQ-like fold, structural genomics; 1.31A {Clostridium acetobutylicum} SCOP: d.273.1.1 PDB: 1xbf_A

Probab=99.93  E-value=1.1e-26  Score=159.43  Aligned_cols=50  Identities=44%  Similarity=0.733  Sum_probs=48.1

Q ss_pred             CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCCceEEEEEEe
Q psy13017          2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLN   52 (74)
Q Consensus         2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr~R~v~v~v~   52 (74)
                      ||+|||||+|+|+|++|||.||+|.|||||+||||||| +||+|+|+++++
T Consensus        95 n~~AHikssL~G~S~tiPV~~GrL~LGtWQgIyl~E~d-gpr~R~v~v~i~  144 (144)
T 1vmh_A           95 NSHAHIKASLMGSSQQIIIENGKLKLGTWQGIYFTEFD-GPRDRKVFVKII  144 (144)
T ss_dssp             CHHHHHHHHHHCSEEEEEEETTEECCCTTEEEEEEESS-CSCEEEEEEEEC
T ss_pred             CchHHHHHHhhCCeEEEEEECCEECcCCCcEEEEEECC-CCceeEEEEEEC
Confidence            89999999999999999999999999999999999997 799999999985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	74
d1vmfa_	136	d.273.1.1 (A:) Hypothetical protein BH3498 {Bacill	2e-23
d1vpha_	138	d.273.1.1 (A:) Hypothetical protein SSO2532 {Sulfo	8e-23
d1vmja_	139	d.273.1.1 (A:) Hypothetical protein TM0723 {Thermo	2e-21
d1vmha_	129	d.273.1.1 (A:) B.subtilis YugU ortolog CAC0907 {Cl	5e-19

>d1vmfa_ d.273.1.1 (A:) Hypothetical protein BH3498 {Bacillus halodurans [TaxId: 86665]} Length = 136

class: Alpha and beta proteins (a+b)
fold: YjbQ-like
superfamily: YjbQ-like
family: YjbQ-like
domain: Hypothetical protein BH3498
species: Bacillus halodurans [TaxId: 86665]

 Score = 84.2 bits (208), Expect = 2e-23
 Identities = 21/53 (39%), Positives = 30/53 (56%)

Query: 1   MELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
               AH+K   +G + T+ IS+G+L LG WQG++ CE      +RK VV L  
Sbjct: 83  GNTAAHLKTSTVGHAQTLIISEGRLVLGTWQGVYFCEFDGPRTNRKFVVKLLT 135

>d1vpha_ d.273.1.1 (A:) Hypothetical protein SSO2532 {Sulfolobus solfataricus [TaxId: 2287]} Length = 138

class: Alpha and beta proteins (a+b)
fold: YjbQ-like
superfamily: YjbQ-like
family: YjbQ-like
domain: Hypothetical protein SSO2532
species: Sulfolobus solfataricus [TaxId: 2287]

 Score = 82.3 bits (203), Expect = 8e-23
 Identities = 19/50 (38%), Positives = 26/50 (52%)

Query: 4   PAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
            AH+ A FLG+    P+ +GKL  G WQ I+L E       R + V + G
Sbjct: 88  HAHLGATFLGAERVFPVREGKLVRGTWQNIFLVELDGPRSERHITVEILG 137

>d1vmja_ d.273.1.1 (A:) Hypothetical protein TM0723 {Thermotoga maritima [TaxId: 2336]} Length = 139

class: Alpha and beta proteins (a+b)
fold: YjbQ-like
superfamily: YjbQ-like
family: YjbQ-like
domain: Hypothetical protein TM0723
species: Thermotoga maritima [TaxId: 2336]

 Score = 78.8 bits (194), Expect = 2e-21
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 1   MELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNG 53
               AH+K   +G  + I I+D K++LG W+ ++  E  D    ++++V + G
Sbjct: 87  DNADAHLKRTIMGREVVIAITDRKMDLGPWEQVFYGEF-DGMRPKRVLVKIIG 138

>d1vmha_ d.273.1.1 (A:) B.subtilis YugU ortolog CAC0907 {Clostridium acetobutylicum [TaxId: 1488]} Length = 129

class: Alpha and beta proteins (a+b)
fold: YjbQ-like
superfamily: YjbQ-like
family: YjbQ-like
domain: B.subtilis YugU ortolog CAC0907
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 72.6 bits (178), Expect = 5e-19
 Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 1   MELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTL 51
               AH+KA  +GSS  I I +GKL LG WQGI+  E  D    RK+ V +
Sbjct: 79  GNSHAHIKASLMGSSQQIIIENGKLKLGTWQGIYFTEF-DGPRDRKVFVKI 128

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	74
d1vmja_	139	Hypothetical protein TM0723 {Thermotoga maritima [	99.94
d1vpha_	138	Hypothetical protein SSO2532 {Sulfolobus solfatari	99.94
d1vmfa_	136	Hypothetical protein BH3498 {Bacillus halodurans [	99.94
d1vmha_	129	B.subtilis YugU ortolog CAC0907 {Clostridium aceto	99.93

>d1vmja_ d.273.1.1 (A:) Hypothetical protein TM0723 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: YjbQ-like
superfamily: YjbQ-like
family: YjbQ-like
domain: Hypothetical protein TM0723
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=3.5e-28  Score=163.87  Aligned_cols=52  Identities=27%  Similarity=0.585  Sum_probs=50.7

Q ss_pred             CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCCceEEEEEEecc
Q psy13017          2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGV   54 (74)
Q Consensus         2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr~R~v~v~v~Ge   54 (74)
                      ||+|||||+|+|+|++|||.||+|.||+||+||||||| +||+|+|+|+++||
T Consensus        88 n~~aHiks~l~g~s~tipi~~G~L~LGtWQ~I~l~E~d-g~r~R~v~v~iiGE  139 (139)
T d1vmja_          88 NADAHLKRTIMGREVVIAITDRKMDLGPWEQVFYGEFD-GMRPKRVLVKIIGE  139 (139)
T ss_dssp             CHHHHHHHHHHCSEEEEEEETTEECCCTTCEEEEEESS-CSSCEEEEEEEEEC
T ss_pred             CcHHHHHHhhhCCeEEEEEECCEECccCCCEEEEEECc-CCCceEEEEEEEcC
Confidence            89999999999999999999999999999999999997 89999999999997

>d1vpha_ d.273.1.1 (A:) Hypothetical protein SSO2532 {Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a+b)
fold: YjbQ-like
superfamily: YjbQ-like
family: YjbQ-like
domain: Hypothetical protein SSO2532
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=99.94  E-value=5.6e-28  Score=162.28  Aligned_cols=53  Identities=36%  Similarity=0.642  Sum_probs=50.1

Q ss_pred             CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCCceEEEEEEecc
Q psy13017          2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGV   54 (74)
Q Consensus         2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr~R~v~v~v~Ge   54 (74)
                      ||+|||||+|+|+|++|||.||+|.||+||+|||+|||..+++|+|+|+++||
T Consensus        86 n~~aHiks~L~g~s~tipi~dG~L~LGtWQ~I~l~E~d~~~~~R~v~v~i~GE  138 (138)
T d1vpha_          86 NAHAHLGATFLGAERVFPVREGKLVRGTWQNIFLVELDGPRSERHITVEILGE  138 (138)
T ss_dssp             CHHHHHHHHHHCSEEEEEEETTEECCCTTCEEEEEESSCCEEEEEEEEEEEEC
T ss_pred             ChHHHHHhhhcCCeEEEEEECCEECccCccEEEEEECcCCCCceEEEEEEEeC
Confidence            89999999999999999999999999999999999998555579999999997

>d1vmfa_ d.273.1.1 (A:) Hypothetical protein BH3498 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a+b)
fold: YjbQ-like
superfamily: YjbQ-like
family: YjbQ-like
domain: Hypothetical protein BH3498
species: Bacillus halodurans [TaxId: 86665]

Probab=99.94  E-value=9.7e-28  Score=161.10  Aligned_cols=53  Identities=40%  Similarity=0.708  Sum_probs=49.9

Q ss_pred             CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCCceEEEEEEecc
Q psy13017          2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGV   54 (74)
Q Consensus         2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr~R~v~v~v~Ge   54 (74)
                      ||+|||||+|+|+|++|||.||+|.||+||+|||||||+.+++|+|+|+++||
T Consensus        84 n~~aHlks~l~g~s~tiPv~~G~L~LGtWQ~I~l~E~d~~r~~R~v~v~iiGe  136 (136)
T d1vmfa_          84 NTAAHLKTSTVGHAQTLIISEGRLVLGTWQGVYFCEFDGPRTNRKFVVKLLTD  136 (136)
T ss_dssp             CHHHHHHHHHHCSEEEEEEETTEECCCTTEEEEEEESSCCCSCEEEEEEEEEC
T ss_pred             ChHHHHHhhhcCCeEEEEEECCEECccCccEEEEEEccCCCCceEEEEEEecC
Confidence            89999999999999999999999999999999999998544579999999997

>d1vmha_ d.273.1.1 (A:) B.subtilis YugU ortolog CAC0907 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a+b)
fold: YjbQ-like
superfamily: YjbQ-like
family: YjbQ-like
domain: B.subtilis YugU ortolog CAC0907
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.93  E-value=7e-27  Score=155.98  Aligned_cols=50  Identities=44%  Similarity=0.733  Sum_probs=48.4

Q ss_pred             CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCCceEEEEEEe
Q psy13017          2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLN   52 (74)
Q Consensus         2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr~R~v~v~v~   52 (74)
                      |++||+||+|+|+|++|||.||+|.||+||+|||+||| +||+|+++|+++
T Consensus        80 n~~aHiks~l~g~s~tiPi~~G~L~LGtWQ~I~l~E~d-~~r~R~v~v~ii  129 (129)
T d1vmha_          80 NSHAHIKASLMGSSQQIIIENGKLKLGTWQGIYFTEFD-GPRDRKVFVKII  129 (129)
T ss_dssp             CHHHHHHHHHHCSEEEEEEETTEECCCTTEEEEEEESS-CSCEEEEEEEEC
T ss_pred             cchhhhhhHhcCCeEEEEEECCEECcCCccEEEEEECc-CCceeEEEEEEC
Confidence            89999999999999999999999999999999999997 799999999985