Psyllid ID: psy13180
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 326 | ||||||
| 170056438 | 325 | tricarboxylate transport protein, mitoch | 0.653 | 0.655 | 0.572 | 4e-71 | |
| 312377555 | 326 | hypothetical protein AND_11111 [Anophele | 0.653 | 0.653 | 0.582 | 6e-70 | |
| 157111903 | 321 | tricarboxylate transport protein [Aedes | 0.653 | 0.663 | 0.558 | 7e-69 | |
| 357618091 | 317 | putative tricarboxylate transport protei | 0.644 | 0.662 | 0.538 | 1e-68 | |
| 427796343 | 290 | Putative tricarboxylate transport protei | 0.653 | 0.734 | 0.524 | 3e-67 | |
| 194744333 | 311 | GF16639 [Drosophila ananassae] gi|190627 | 0.653 | 0.684 | 0.529 | 2e-65 | |
| 346469617 | 321 | hypothetical protein [Amblyomma maculatu | 0.647 | 0.657 | 0.525 | 3e-65 | |
| 91084971 | 313 | PREDICTED: similar to tricarboxylate tra | 0.647 | 0.674 | 0.521 | 1e-64 | |
| 328720505 | 316 | PREDICTED: tricarboxylate transport prot | 0.662 | 0.683 | 0.505 | 3e-64 | |
| 307206507 | 337 | Putative tricarboxylate transport protei | 0.622 | 0.602 | 0.535 | 5e-64 |
| >gi|170056438|ref|XP_001864030.1| tricarboxylate transport protein, mitochondrial [Culex quinquefasciatus] gi|167876127|gb|EDS39510.1| tricarboxylate transport protein, mitochondrial [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 157/274 (57%), Positives = 179/274 (65%), Gaps = 61/274 (22%)
Query: 1 GITGGIEICITFPTEYVKTQLQLDGKGADKKYTGIWDCAKKTVKSHGLY----------- 49
GITGGIEICITFPTEYVKTQLQLD KGA K+Y GI DC KKTVK++G +
Sbjct: 49 GITGGIEICITFPTEYVKTQLQLDEKGATKQYNGIADCVKKTVKTNGFFGLYRGLSVLLY 108
Query: 50 -------------------LQEVSRALQLDGK---------------------------- 62
L E + L GK
Sbjct: 109 GSIPKSAVRFGAFETFKGQLMEPNGTLSTSGKLLAGLGAGVAEAILAVTPMETVKVKFIN 168
Query: 63 ---GADKKYTGIWDCAKKTVKSHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVYRGG 119
+ KY G + VK GF GVY+GL+ATI+KQGSNQAIRF+VMET+K+VY+GG
Sbjct: 169 DQRSGNPKYKGFFHGVGMIVKQEGFSGVYKGLTATIMKQGSNQAIRFYVMETLKEVYKGG 228
Query: 120 DSTAHVPKYMVGVFGAVAGAASVFGNTPLDVVKTRMQGLEAARYKNTLDCAVQIWKHEGP 179
D + VPK +VG FGAVAGAASVFGNTP+DVVKTRMQGLEAA+YKNT+DCAVQIWK+EGP
Sbjct: 229 DQSKPVPKMVVGAFGAVAGAASVFGNTPIDVVKTRMQGLEAAKYKNTVDCAVQIWKNEGP 288
Query: 180 AAFYKGTVPRLGRVCLDVAITFMIYDSFMEVFNK 213
AFYKGTVPRL RVCLDVAITFMIYDSFM++FNK
Sbjct: 289 MAFYKGTVPRLSRVCLDVAITFMIYDSFMDLFNK 322
|
Source: Culex quinquefasciatus Species: Culex quinquefasciatus Genus: Culex Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|312377555|gb|EFR24364.1| hypothetical protein AND_11111 [Anopheles darlingi] | Back alignment and taxonomy information |
|---|
| >gi|157111903|ref|XP_001657348.1| tricarboxylate transport protein [Aedes aegypti] gi|108878247|gb|EAT42472.1| AAEL005991-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
| >gi|357618091|gb|EHJ71185.1| putative tricarboxylate transport protein [Danaus plexippus] | Back alignment and taxonomy information |
|---|
| >gi|427796343|gb|JAA63623.1| Putative tricarboxylate transport protein mitochondrial, partial [Rhipicephalus pulchellus] | Back alignment and taxonomy information |
|---|
| >gi|194744333|ref|XP_001954649.1| GF16639 [Drosophila ananassae] gi|190627686|gb|EDV43210.1| GF16639 [Drosophila ananassae] | Back alignment and taxonomy information |
|---|
| >gi|346469617|gb|AEO34653.1| hypothetical protein [Amblyomma maculatum] | Back alignment and taxonomy information |
|---|
| >gi|91084971|ref|XP_972074.1| PREDICTED: similar to tricarboxylate transport protein [Tribolium castaneum] gi|270008543|gb|EFA04991.1| hypothetical protein TcasGA2_TC015070 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|328720505|ref|XP_001951190.2| PREDICTED: tricarboxylate transport protein, mitochondrial-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
| >gi|307206507|gb|EFN84533.1| Putative tricarboxylate transport protein, mitochondrial [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 326 | ||||||
| FB|FBgn0037912 | 317 | sea "scheggia" [Drosophila mel | 0.472 | 0.485 | 0.616 | 8.7e-67 | |
| UNIPROTKB|F1P0C8 | 317 | SLC25A1 "Uncharacterized prote | 0.450 | 0.463 | 0.564 | 1.8e-58 | |
| UNIPROTKB|F1MXY8 | 310 | SLC25A1 "Tricarboxylate transp | 0.472 | 0.496 | 0.532 | 4.2e-57 | |
| UNIPROTKB|P79110 | 311 | SLC25A1 "Tricarboxylate transp | 0.472 | 0.495 | 0.525 | 5.4e-57 | |
| UNIPROTKB|P53007 | 311 | SLC25A1 "Tricarboxylate transp | 0.472 | 0.495 | 0.525 | 3.8e-56 | |
| UNIPROTKB|F1RK74 | 308 | SLC25A1 "Uncharacterized prote | 0.472 | 0.5 | 0.512 | 4.8e-56 | |
| ZFIN|ZDB-GENE-040426-1172 | 359 | slc25a1a "solute carrier famil | 0.447 | 0.406 | 0.527 | 7.8e-56 | |
| UNIPROTKB|F1P808 | 331 | SLC25A1 "Uncharacterized prote | 0.450 | 0.444 | 0.530 | 9.9e-56 | |
| UNIPROTKB|F1M1U5 | 272 | F1M1U5 "Uncharacterized protei | 0.466 | 0.558 | 0.480 | 6.8e-51 | |
| ZFIN|ZDB-GENE-081104-41 | 216 | si:dkey-178e17.1 "si:dkey-178e | 0.475 | 0.717 | 0.522 | 2.5e-42 |
| FB|FBgn0037912 sea "scheggia" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 497 (180.0 bits), Expect = 8.7e-67, Sum P(2) = 8.7e-67
Identities = 95/154 (61%), Positives = 115/154 (74%)
Query: 60 DGKGADKKYTGIWDCAKKTVKSHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVYRGG 119
D + + K+ G + +KS G G+Y+GL+ TILKQGSNQAIRFFV+E++KD+Y+G
Sbjct: 161 DQRSGNPKFRGFAHGVGQIIKSEGISGIYKGLTPTILKQGSNQAIRFFVLESLKDLYKGD 220
Query: 120 DSTAHVPKYMXXXXXXXXXXXXXXXNTPLDVVKTRMQGLEAARYKNTLDCAVQIWKHEGP 179
D T VPK + NTPLDVVKTRMQGLEA++YKNT CAV+I K+EGP
Sbjct: 221 DHTKPVPKLVVGVFGAIAGAASVFGNTPLDVVKTRMQGLEASKYKNTAHCAVEILKNEGP 280
Query: 180 AAFYKGTVPRLGRVCLDVAITFMIYDSFMEVFNK 213
AAFYKGTVPRLGRVCLDVAITFMIYDSFM++FNK
Sbjct: 281 AAFYKGTVPRLGRVCLDVAITFMIYDSFMDLFNK 314
|
|
| UNIPROTKB|F1P0C8 SLC25A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MXY8 SLC25A1 "Tricarboxylate transport protein, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P79110 SLC25A1 "Tricarboxylate transport protein, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P53007 SLC25A1 "Tricarboxylate transport protein, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1RK74 SLC25A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-040426-1172 slc25a1a "solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1P808 SLC25A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1M1U5 F1M1U5 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-081104-41 si:dkey-178e17.1 "si:dkey-178e17.1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 326 | |||
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 5e-24 | |
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 7e-16 | |
| PTZ00169 | 300 | PTZ00169, PTZ00169, ADP/ATP transporter on adenyla | 9e-13 | |
| PTZ00169 | 300 | PTZ00169, PTZ00169, ADP/ATP transporter on adenyla | 7e-10 | |
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 3e-08 |
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
|---|
Score = 93.9 bits (234), Expect = 5e-24
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 134 GAVAGAASVFGNTPLDVVKTRMQGLEAA---RYKNTLDCAVQIWKHEGPAAFYKGTVPRL 190
G +AGA + PLDVVKTR+Q A +YK LDC +I+K EG YKG +P L
Sbjct: 12 GGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLYKGLLPNL 71
Query: 191 GRVCLDVAITFMIYDSFMEVFNKSK 215
RV AI F Y++ ++ K
Sbjct: 72 LRVAPAAAIYFGTYETLKKLLLKKL 96
|
Length = 96 |
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
|---|
| >gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 326 | |||
| KOG0752|consensus | 320 | 100.0 | ||
| KOG0753|consensus | 317 | 100.0 | ||
| KOG0764|consensus | 299 | 100.0 | ||
| PTZ00169 | 300 | ADP/ATP transporter on adenylate translocase; Prov | 100.0 | |
| KOG0754|consensus | 294 | 100.0 | ||
| KOG0760|consensus | 302 | 100.0 | ||
| KOG0758|consensus | 297 | 100.0 | ||
| KOG0759|consensus | 286 | 100.0 | ||
| PTZ00168 | 259 | mitochondrial carrier protein; Provisional | 100.0 | |
| KOG0757|consensus | 319 | 100.0 | ||
| KOG0762|consensus | 311 | 100.0 | ||
| KOG0761|consensus | 361 | 100.0 | ||
| KOG0751|consensus | 694 | 100.0 | ||
| KOG0768|consensus | 323 | 100.0 | ||
| KOG0770|consensus | 353 | 100.0 | ||
| KOG0765|consensus | 333 | 100.0 | ||
| KOG0036|consensus | 463 | 100.0 | ||
| KOG0755|consensus | 320 | 100.0 | ||
| KOG0766|consensus | 297 | 100.0 | ||
| KOG0769|consensus | 308 | 100.0 | ||
| KOG0763|consensus | 301 | 100.0 | ||
| KOG0756|consensus | 299 | 100.0 | ||
| KOG0750|consensus | 304 | 100.0 | ||
| KOG0749|consensus | 298 | 100.0 | ||
| KOG0767|consensus | 333 | 100.0 | ||
| KOG0752|consensus | 320 | 100.0 | ||
| KOG0764|consensus | 299 | 100.0 | ||
| KOG0753|consensus | 317 | 100.0 | ||
| PTZ00169 | 300 | ADP/ATP transporter on adenylate translocase; Prov | 100.0 | |
| KOG0759|consensus | 286 | 100.0 | ||
| KOG0757|consensus | 319 | 100.0 | ||
| KOG0768|consensus | 323 | 99.97 | ||
| PTZ00168 | 259 | mitochondrial carrier protein; Provisional | 99.97 | |
| KOG0760|consensus | 302 | 99.97 | ||
| KOG0758|consensus | 297 | 99.97 | ||
| KOG0762|consensus | 311 | 99.97 | ||
| KOG0754|consensus | 294 | 99.96 | ||
| KOG0756|consensus | 299 | 99.95 | ||
| KOG0761|consensus | 361 | 99.95 | ||
| KOG0750|consensus | 304 | 99.94 | ||
| KOG0765|consensus | 333 | 99.94 | ||
| KOG0751|consensus | 694 | 99.93 | ||
| KOG0749|consensus | 298 | 99.93 | ||
| KOG0755|consensus | 320 | 99.92 | ||
| KOG0036|consensus | 463 | 99.92 | ||
| KOG0763|consensus | 301 | 99.91 | ||
| KOG0766|consensus | 297 | 99.91 | ||
| KOG0769|consensus | 308 | 99.9 | ||
| KOG0770|consensus | 353 | 99.9 | ||
| KOG2745|consensus | 321 | 99.89 | ||
| KOG0767|consensus | 333 | 99.87 | ||
| KOG1519|consensus | 297 | 99.74 | ||
| PF00153 | 95 | Mito_carr: Mitochondrial carrier protein; InterPro | 99.7 | |
| KOG1519|consensus | 297 | 99.66 | ||
| KOG2745|consensus | 321 | 99.65 | ||
| KOG2954|consensus | 427 | 99.64 | ||
| PF00153 | 95 | Mito_carr: Mitochondrial carrier protein; InterPro | 99.59 | |
| KOG2954|consensus | 427 | 98.9 |
| >KOG0752|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-54 Score=373.14 Aligned_cols=254 Identities=25% Similarity=0.404 Sum_probs=223.7
Q ss_pred CchhhhHHHhhcchhHHHHHHhcCCCCCCCCCCCHHHHHHHhhhhccchHHHHHHHHHhhccCCCCCCCCHHHHHHHHHH
Q psy13180 1 GITGGIEICITFPTEYVKTQLQLDGKGADKKYTGIWDCAKKTVKSHGLYLQEVSRALQLDGKGADKKYTGIWDCAKKTVK 80 (326)
Q Consensus 1 ~~ag~~~~~~~~Pld~ik~r~q~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 80 (326)
|+||+++..++.|||+||+|+|++.++. ...+++++++.+++|++
T Consensus 35 gvAGavsrt~~APLd~iKIlfQ~~~~~~-----------------------------------~~~k~~g~~~~~~~I~~ 79 (320)
T KOG0752|consen 35 GVAGAVSRTVTAPLDRIKILFQVQVEPS-----------------------------------KTSKYPGVIQAFKSIYR 79 (320)
T ss_pred hHHHHHHHHhcCchhHceEEEEeccccc-----------------------------------cccccccHHHHHHHHHH
Confidence 5799999999999999999999997631 14568899999999999
Q ss_pred hcCccccccchHHHHHhHhhhhHHHHHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHHhhcCcHHHHHHHHhcCCC
Q psy13180 81 SHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVYRGGDSTAHVPKYMVGVFGAVAGAASVFGNTPLDVVKTRMQGLEA 160 (326)
Q Consensus 81 ~~G~~gLyrG~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~v~~Pld~ik~r~q~~~~ 160 (326)
+||++|||||..+++++.+|+.+++|..||.++++....++....++...++||++||+++++++||+|++|+|+-.+++
T Consensus 80 eEG~~g~wkGn~~~~~r~~pY~avqf~aye~~k~~~~~~~~~~~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~ 159 (320)
T KOG0752|consen 80 EEGLRGFWKGNGPAQIRIIPYGAVQFSAYEQYKKLVLGVDPNGSLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGE 159 (320)
T ss_pred HhchhhhhcCcccceeeeeecchhhhhHHHHhhhhhhccCcccccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecc
Confidence 99999999999999999999999999999999985443333335688899999999999999999999999999988755
Q ss_pred C-CCCCHHHHHHHHHHhcCccccccchhhhhhHHHHHHHHHHHHHHHHHHH-HhhcccchhhhhhhhhhHHHHhhhhHHH
Q psy13180 161 A-RYKNTLDCAVQIWKHEGPAAFYKGTVPRLGRVCLDVAITFMIYDSFMEV-FNKSKNIESCIDLLDLWFEYFRFGAFEQ 238 (326)
Q Consensus 161 ~-~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (326)
. .|+++++++++|+++||++|||||+.|++++.+|+.++.|.+||.++++ +.+.
T Consensus 160 ~~~y~~l~~a~~~I~~~eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~------------------------ 215 (320)
T KOG0752|consen 160 LKVYRGLLHAFKTIYREEGIRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLKS------------------------ 215 (320)
T ss_pred cccCCcHHHHHHHHHHhcchhhhhcCcchhhheehhhhhhHHHHHHHHHHhhcccc------------------------
Confidence 4 7999999999999999999999999999999999999999999999996 2222
Q ss_pred HHHHHhhcCCCCCCchhhhhhcccccccceeeeCchhhhHHHhhcCCCC---CCCcccccchhhhhHhhchhhhHHHHhh
Q psy13180 239 LKNQAVDSQGNLSPGMRVLCGLGAGICEAIFAVTPMETVKVKFINDQRS---PNPRFKGFFHGTGLIIKEEGKVALTLVI 315 (326)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~v~~Pldvirtr~q~~~~~---~~~~~~~~~~~~~~i~~~eG~~gly~G~ 315 (326)
..++..+.+..+++|++||++++ .++||||+||+|||+.+.. ...+|.+++||++.|+++||+.|||||+
T Consensus 216 ------~~~~~~~~~~~l~~GalAG~~aq-ti~yPlD~vRrrmQ~~~~~~~~~~~~~~~~~~~~~~i~~~EG~~gLYkGl 288 (320)
T KOG0752|consen 216 ------SGNKELSNFERLLCGALAGAVAQ-TITYPLDTVRRRMQLGGLKYFGGGFRYKGVLDAFRQIVKTEGVKGLYKGL 288 (320)
T ss_pred ------cccchhhhHHHHHHHHHHHHHHh-hhcccHHHHHHHHhccCccccccccccccHHHHHHHHHHHhhhhhhhccc
Confidence 12234566788999999999998 8999999999999998853 3346789999999999999999999999
Q ss_pred hhhHh
Q psy13180 316 EEKEC 320 (326)
Q Consensus 316 ~~r~~ 320 (326)
.|-++
T Consensus 289 ~p~~l 293 (320)
T KOG0752|consen 289 SPNLL 293 (320)
T ss_pred cHHHH
Confidence 99765
|
|
| >KOG0753|consensus | Back alignment and domain information |
|---|
| >KOG0764|consensus | Back alignment and domain information |
|---|
| >PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >KOG0754|consensus | Back alignment and domain information |
|---|
| >KOG0760|consensus | Back alignment and domain information |
|---|
| >KOG0758|consensus | Back alignment and domain information |
|---|
| >KOG0759|consensus | Back alignment and domain information |
|---|
| >PTZ00168 mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
| >KOG0757|consensus | Back alignment and domain information |
|---|
| >KOG0762|consensus | Back alignment and domain information |
|---|
| >KOG0761|consensus | Back alignment and domain information |
|---|
| >KOG0751|consensus | Back alignment and domain information |
|---|
| >KOG0768|consensus | Back alignment and domain information |
|---|
| >KOG0770|consensus | Back alignment and domain information |
|---|
| >KOG0765|consensus | Back alignment and domain information |
|---|
| >KOG0036|consensus | Back alignment and domain information |
|---|
| >KOG0755|consensus | Back alignment and domain information |
|---|
| >KOG0766|consensus | Back alignment and domain information |
|---|
| >KOG0769|consensus | Back alignment and domain information |
|---|
| >KOG0763|consensus | Back alignment and domain information |
|---|
| >KOG0756|consensus | Back alignment and domain information |
|---|
| >KOG0750|consensus | Back alignment and domain information |
|---|
| >KOG0749|consensus | Back alignment and domain information |
|---|
| >KOG0767|consensus | Back alignment and domain information |
|---|
| >KOG0752|consensus | Back alignment and domain information |
|---|
| >KOG0764|consensus | Back alignment and domain information |
|---|
| >KOG0753|consensus | Back alignment and domain information |
|---|
| >PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >KOG0759|consensus | Back alignment and domain information |
|---|
| >KOG0757|consensus | Back alignment and domain information |
|---|
| >KOG0768|consensus | Back alignment and domain information |
|---|
| >PTZ00168 mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
| >KOG0760|consensus | Back alignment and domain information |
|---|
| >KOG0758|consensus | Back alignment and domain information |
|---|
| >KOG0762|consensus | Back alignment and domain information |
|---|
| >KOG0754|consensus | Back alignment and domain information |
|---|
| >KOG0756|consensus | Back alignment and domain information |
|---|
| >KOG0761|consensus | Back alignment and domain information |
|---|
| >KOG0750|consensus | Back alignment and domain information |
|---|
| >KOG0765|consensus | Back alignment and domain information |
|---|
| >KOG0751|consensus | Back alignment and domain information |
|---|
| >KOG0749|consensus | Back alignment and domain information |
|---|
| >KOG0755|consensus | Back alignment and domain information |
|---|
| >KOG0036|consensus | Back alignment and domain information |
|---|
| >KOG0763|consensus | Back alignment and domain information |
|---|
| >KOG0766|consensus | Back alignment and domain information |
|---|
| >KOG0769|consensus | Back alignment and domain information |
|---|
| >KOG0770|consensus | Back alignment and domain information |
|---|
| >KOG2745|consensus | Back alignment and domain information |
|---|
| >KOG0767|consensus | Back alignment and domain information |
|---|
| >KOG1519|consensus | Back alignment and domain information |
|---|
| >PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] | Back alignment and domain information |
|---|
| >KOG1519|consensus | Back alignment and domain information |
|---|
| >KOG2745|consensus | Back alignment and domain information |
|---|
| >KOG2954|consensus | Back alignment and domain information |
|---|
| >PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] | Back alignment and domain information |
|---|
| >KOG2954|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 326 | ||||
| 1okc_A | 297 | Structure Of Mitochondrial AdpATP CARRIER IN COMPLE | 3e-10 | ||
| 1okc_A | 297 | Structure Of Mitochondrial AdpATP CARRIER IN COMPLE | 6e-07 | ||
| 2lck_A | 303 | Structure Of The Mitochondrial Uncoupling Protein 2 | 3e-09 |
| >pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 | Back alignment and structure |
|
| >pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 | Back alignment and structure |
| >pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 326 | |||
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 2e-43 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 4e-40 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 1e-32 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 7e-04 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 7e-39 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 1e-37 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 1e-20 |
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 2e-43
Identities = 68/315 (21%), Positives = 115/315 (36%), Gaps = 70/315 (22%)
Query: 1 GITGGIEICITFPTEYVKTQLQLDGKGADKKYTGIWDCAKKTVKSHGLYLQEVSRALQLD 60
G I ITFP + K +LQ+ G+ L
Sbjct: 9 GTAACIADLITFPLDTAKVRLQIQGESQ-----------------------------GLV 39
Query: 61 GKGADKKYTGIWDCAKKTVKSHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVYRGGD 120
A +Y G+ V++ G + +Y GL A + +Q S ++R + +++K Y G
Sbjct: 40 RTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGS 99
Query: 121 STAHVPKYMVGVFGAVAGAASVFGNTPLDVVKTRMQ----GLEAARYKNTLDCAVQIWKH 176
A + + + G+ GA +V P DVVK R Q RY++T++ I +
Sbjct: 100 EHAGIGSRL--LAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIARE 157
Query: 177 EGPAAFYKGTVPRLGRVCLDVAITFMIYDSFMEVFNKSKNIESCIDLLDLWFEYFRFGAF 236
EG +KGT P + R + + YD + K+ + D L F
Sbjct: 158 EGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMT---DDLPCHF-------- 206
Query: 237 EQLKNQAVDSQGNLSPGMRVLCGLGAGICEAIFAVTPMETVKVKFINDQRSPNPRFKGFF 296
GAG C +P++ VK +++N S ++
Sbjct: 207 --------------------TSAFGAGFC-TTVIASPVDVVKTRYMN---SALGQYHSAG 242
Query: 297 HGTGLIIKEEGKVAL 311
H ++++EG A
Sbjct: 243 HCALTMLRKEGPRAF 257
|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 326 | |||
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 100.0 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 100.0 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 100.0 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 100.0 |
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-51 Score=367.51 Aligned_cols=255 Identities=22% Similarity=0.299 Sum_probs=216.0
Q ss_pred CchhhhHHHhhcchhHHHHHHhcCCCCCCCCCCCHHHHHHHhhhhccchHHHHHHHHHhhccCCCCCCCCHHHHHHHHHH
Q psy13180 1 GITGGIEICITFPTEYVKTQLQLDGKGADKKYTGIWDCAKKTVKSHGLYLQEVSRALQLDGKGADKKYTGIWDCAKKTVK 80 (326)
Q Consensus 1 ~~ag~~~~~~~~Pld~ik~r~q~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 80 (326)
++||+++.++++|||+||+|+|++....+. .....|++.++++++|++
T Consensus 15 ~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~--------------------------------~~~~~~~~~~~~~~~i~~ 62 (297)
T 1okc_A 15 GVAAAISKTAVAPIERVKLLLQVQHASKQI--------------------------------SAEKQYKGIIDCVVRIPK 62 (297)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHGGGCSSC--------------------------------CGGGSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHhccccccc--------------------------------ccccccccHHHHHHHHHh
Confidence 367888999999999999999998542110 012458899999999999
Q ss_pred hcCccccccchHHHHHhHhhhhHHHHHHHHHHHHHh-cCCCCCCC--chhHHHHHHHHHHHHHHHhhcCcHHHHHHHHhc
Q psy13180 81 SHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVY-RGGDSTAH--VPKYMVGVFGAVAGAASVFGNTPLDVVKTRMQG 157 (326)
Q Consensus 81 ~~G~~gLyrG~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~g~~ag~~~~~v~~Pld~ik~r~q~ 157 (326)
+||++|||||+.+++++.++..+++|.+||.+++.+ ...+.... ......+++|++||++++++++|+|+||+|+|.
T Consensus 63 ~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~ 142 (297)
T 1okc_A 63 EQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAA 142 (297)
T ss_dssp HHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhheecccHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhc
Confidence 999999999999999999999999999999999954 33222221 234667899999999999999999999999998
Q ss_pred CC-----CCCCCCHHHHHHHHHHhcCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhHHHHh
Q psy13180 158 LE-----AARYKNTLDCAVQIWKHEGPAAFYKGTVPRLGRVCLDVAITFMIYDSFMEVFNKSKNIESCIDLLDLWFEYFR 232 (326)
Q Consensus 158 ~~-----~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (326)
+. ...|+++++++++|+++||++|||||+.+++++.+|..++.|.+||.+++.+.+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~------------------ 204 (297)
T 1okc_A 143 DVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP------------------ 204 (297)
T ss_dssp CCCSSTTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG------------------
T ss_pred cccCCCcCcCCCCHHHHHHHHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccC------------------
Confidence 64 2468999999999999999999999999999999999999999999999865321
Q ss_pred hhhHHHHHHHHhhcCCCCCCchhhhhhcccccccceeeeCchhhhHHHhhcCCCCC--CCcccccchhhhhHhhchhhhH
Q psy13180 233 FGAFEQLKNQAVDSQGNLSPGMRVLCGLGAGICEAIFAVTPMETVKVKFINDQRSP--NPRFKGFFHGTGLIIKEEGKVA 310 (326)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~v~~Pldvirtr~q~~~~~~--~~~~~~~~~~~~~i~~~eG~~g 310 (326)
...+....+++|+++|++++ ++++|+|+||+|||.+.... ...|.+++||+++|+++||++|
T Consensus 205 ---------------~~~~~~~~~~~g~~ag~~a~-~~t~P~dvvktr~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~g 268 (297)
T 1okc_A 205 ---------------KNVHIIVSWMIAQTVTAVAG-LVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKA 268 (297)
T ss_dssp ---------------GCSCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGG
T ss_pred ---------------CCccHHHHHHHHHHHHHHHH-HhcChHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHcCcCe
Confidence 01234557889999999998 89999999999999875432 2479999999999999999999
Q ss_pred HHHhhhhhHhh
Q psy13180 311 LTLVIEEKECF 321 (326)
Q Consensus 311 ly~G~~~r~~~ 321 (326)
||||+.|+++-
T Consensus 269 lyrG~~~~~~r 279 (297)
T 1okc_A 269 FFKGAWSNVLR 279 (297)
T ss_dssp GGTTHHHHHHH
T ss_pred EecchHHHHHh
Confidence 99999999875
|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 326 | ||||
| d1okca_ | 292 | f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta | 4e-16 | |
| d1okca_ | 292 | f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta | 2e-13 | |
| d1okca_ | 292 | f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta | 2e-08 | |
| d1okca_ | 292 | f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta | 5e-04 |
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Mitochondrial carrier superfamily: Mitochondrial carrier family: Mitochondrial carrier domain: ADP,ATP carrier protein species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Score = 75.1 bits (183), Expect = 4e-16
Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 9/179 (5%)
Query: 32 YTGIWDCAKKTVKSHGLYLQEVSRALQLDGKGADKKYTGIWDCAKKTVKSHGFKGVYQGL 91
+G A + L A + A +++TG+ +C K KS G +G+YQG
Sbjct: 116 ASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGF 175
Query: 92 SATILKQGSNQAIRFFVMETMKDVYRGGDSTAHVPKYMVGVFGAVAGAASVFGNTPLDVV 151
+ ++ +A F V +T K + + + +M A + + P D V
Sbjct: 176 NVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWM---IAQTVTAVAGLVSYPFDTV 232
Query: 152 KTRMQ-----GLEAARYKNTLDCAVQIWKHEGPAAFYKGTVPRLGRVCLDVAITFMIYD 205
+ RM Y T+DC +I K EGP AF+KG + R + A ++YD
Sbjct: 233 RRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRG-MGGAFVLVLYD 290
|
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 | Back information, alignment and structure |
|---|
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 | Back information, alignment and structure |
|---|
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 326 | |||
| d1okca_ | 292 | ADP,ATP carrier protein {Cow (Bos taurus), heart i | 100.0 | |
| d1okca_ | 292 | ADP,ATP carrier protein {Cow (Bos taurus), heart i | 99.96 |
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Mitochondrial carrier superfamily: Mitochondrial carrier family: Mitochondrial carrier domain: ADP,ATP carrier protein species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00 E-value=1.6e-47 Score=338.70 Aligned_cols=255 Identities=22% Similarity=0.297 Sum_probs=219.0
Q ss_pred CchhhhHHHhhcchhHHHHHHhcCCCCCCCCCCCHHHHHHHhhhhccchHHHHHHHHHhhccCCCCCCCCHHHHHHHHHH
Q psy13180 1 GITGGIEICITFPTEYVKTQLQLDGKGADKKYTGIWDCAKKTVKSHGLYLQEVSRALQLDGKGADKKYTGIWDCAKKTVK 80 (326)
Q Consensus 1 ~~ag~~~~~~~~Pld~ik~r~q~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 80 (326)
++||+++.+++||||+||+|+|+++...... ....+++.+++++++++
T Consensus 14 ~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~--------------------------------~~~~~~~~~~~~~~i~~ 61 (292)
T d1okca_ 14 GVAAAISKTAVAPIERVKLLLQVQHASKQIS--------------------------------AEKQYKGIIDCVVRIPK 61 (292)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHGGGCSSCC--------------------------------GGGSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHhcCCCCCCCC--------------------------------cccccCCHHHHHHHHHH
Confidence 4688899999999999999999986532211 14568999999999999
Q ss_pred hcCccccccchHHHHHhHhhhhHHHHHHHHHHHHHhcCCCCCCC---chhHHHHHHHHHHHHHHHhhcCcHHHHHHHHhc
Q psy13180 81 SHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVYRGGDSTAH---VPKYMVGVFGAVAGAASVFGNTPLDVVKTRMQG 157 (326)
Q Consensus 81 ~~G~~gLyrG~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~ag~~~~~v~~Pld~ik~r~q~ 157 (326)
+||+++||||+.+.+++..+...++|.+|+.+++.+.+...... ......+.+|.+|++++.++++|+|++|+|+|.
T Consensus 62 ~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~ 141 (292)
T d1okca_ 62 EQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAA 141 (292)
T ss_dssp HHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeec
Confidence 99999999999999999999999999999999998876543332 234556789999999999999999999999997
Q ss_pred CC-----CCCCCCHHHHHHHHHHhcCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhHHHHh
Q psy13180 158 LE-----AARYKNTLDCAVQIWKHEGPAAFYKGTVPRLGRVCLDVAITFMIYDSFMEVFNKSKNIESCIDLLDLWFEYFR 232 (326)
Q Consensus 158 ~~-----~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (326)
+. .+.|.+..+++++++++||+++||+|+.+++++.+++.++.|..||.+++.+.+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~------------------ 203 (292)
T d1okca_ 142 DVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP------------------ 203 (292)
T ss_dssp CCCSSTTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG------------------
T ss_pred cccccccccccccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhcccc------------------
Confidence 53 3467899999999999999999999999999999999999999999998765432
Q ss_pred hhhHHHHHHHHhhcCCCCCCchhhhhhcccccccceeeeCchhhhHHHhhcCCCCCC--CcccccchhhhhHhhchhhhH
Q psy13180 233 FGAFEQLKNQAVDSQGNLSPGMRVLCGLGAGICEAIFAVTPMETVKVKFINDQRSPN--PRFKGFFHGTGLIIKEEGKVA 310 (326)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~v~~Pldvirtr~q~~~~~~~--~~~~~~~~~~~~i~~~eG~~g 310 (326)
........++++++++++++ +++||+||||+|||.+..... ..|.+++||++++++|||++|
T Consensus 204 ---------------~~~~~~~~~~~~~~~~~~a~-~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~ 267 (292)
T d1okca_ 204 ---------------KNVHIIVSWMIAQTVTAVAG-LVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKA 267 (292)
T ss_dssp ---------------GCSCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGG
T ss_pred ---------------cccchHHHHHHHHHHHHHHh-hccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCc
Confidence 12234556788899999987 899999999999999876543 378999999999999999999
Q ss_pred HHHhhhhhHhh
Q psy13180 311 LTLVIEEKECF 321 (326)
Q Consensus 311 ly~G~~~r~~~ 321 (326)
||||+.||++.
T Consensus 268 lyrG~~~~~~r 278 (292)
T d1okca_ 268 FFKGAWSNVLR 278 (292)
T ss_dssp GGTTHHHHHHH
T ss_pred ccccHHHHHHH
Confidence 99999999876
|
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} | Back information, alignment and structure |
|---|