Psyllid ID: psy13180


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320------
GITGGIEICITFPTEYVKTQLQLDGKGADKKYTGIWDCAKKTVKSHGLYLQEVSRALQLDGKGADKKYTGIWDCAKKTVKSHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVYRGGDSTAHVPKYMVGVFGAVAGAASVFGNTPLDVVKTRMQGLEAARYKNTLDCAVQIWKHEGPAAFYKGTVPRLGRVCLDVAITFMIYDSFMEVFNKSKNIESCIDLLDLWFEYFRFGAFEQLKNQAVDSQGNLSPGMRVLCGLGAGICEAIFAVTPMETVKVKFINDQRSPNPRFKGFFHGTGLIIKEEGKVALTLVIEEKECFQHINK
ccccHHHHHHcccHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccccHHHHHcccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccccccccHHHHHHHHHHHHcHHHHccccHHHHHHHHccc
ccccccccEEEccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccHHHHHHHHHHHcccHHHHccccHHHHHHccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccHHHHHHHHHHHcccHHHHccccHHHHHHccHHHEHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcHHHHHHHHcHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccHHHHccccHHHHHHHHcc
GITGGIEICITFPTEYVKTQLqldgkgadkkytgiWDCAKKTVKSHGLYLQEVSRALQldgkgadkkytgIWDCAKktvkshgfkgvYQGLSATILKQGSNQAIRFFVMETMKDvyrggdstahvpkYMVGVFGAVAGAasvfgntplDVVKTRMQGLEAARYKNTLDCAVQIWkhegpaafykgtvprlgRVCLDVAITFMIYDSFMEVFNKSKNIESCIDLLDLWFEYFRFGafeqlknqavdsqgnlspgmrVLCGLGAGICEAifavtpmetVKVKfindqrspnprfkgffhgtgliiKEEGKVALTLVIEEKECFQHINK
GITGGIEICITFPTEYVKTQLQLDGKGADKKYTGIWDCAKKTVKSHGLYLQEVSRALqldgkgadKKYTGIWDCAKKTVKSHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVYRGGDSTAHVPKYMVGVFGAVAGAASVFGNTPLDVVKTRMQGLEAARYKNTLDCAVQIWKHEGPAAFYKGTVPRLGRVCLDVAITFMIYDSFMEVFNKSKNIESCIDLLDLWFEYFRFGAFEQLKNQAVDSQGNLSPGMRVLCGLGAGICEAIFAVTPMETVKVKfindqrspnprFKGFFHGTGLIIKEEGKVALTLVIEekecfqhink
GITGGIEICITFPTEYVKTQLQLDGKGADKKYTGIWDCAKKTVKSHGLYLQEVSRALQLDGKGADKKYTGIWDCAKKTVKSHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVYRGGDSTAHVPKYMvgvfgavagaasvfgNTPLDVVKTRMQGLEAARYKNTLDCAVQIWKHEGPAAFYKGTVPRLGRVCLDVAITFMIYDSFMEVFNKSKNIESCIDLLDLWFEYFRFGAFEQLKNQAVDSQGNLSPGMRVLCGLGAGICEAIFAVTPMETVKVKFINDQRSPNPRFKGFFHGTGLIIKEEGKVALTLVIEEKECFQHINK
***GGIEICITFPTEYVKTQLQLDGKGADKKYTGIWDCAKKTVKSHGLYLQEVSRALQLDGKGADKKYTGIWDCAKKTVKSHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVYRGGDSTAHVPKYMVGVFGAVAGAASVFGNTPLDVVKTRMQGLEAARYKNTLDCAVQIWKHEGPAAFYKGTVPRLGRVCLDVAITFMIYDSFMEVFNKSKNIESCIDLLDLWFEYFRFGAFEQLKNQAVDSQGNLSPGMRVLCGLGAGICEAIFAVTPMETVKVKFINDQRSPNPRFKGFFHGTGLIIKEEGKVALTLVIEEKECFQ****
GITGGIEICITFPTEYVKTQLQLDGKGADKKYTGIWDCAKKTVKSHGLYLQEV*****************IWDCAKKTVKSHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVY**********KYMVGVFGAVAGAASVFGNTPLDVVKTRMQG******KN*LDCAVQIWKHEGPAAFYKGTVPRLGRVCLDVAITFMIYDSFMEVFNKSKNIESCIDLLDLWFEYFRFGAFEQL**********LSPGMRVLCGLGAGICEAIFAVTPMETVKVK**************FFHGTGLIIKEEGKVALTLVIEEKECFQH***
GITGGIEICITFPTEYVKTQLQLDGKGADKKYTGIWDCAKKTVKSHGLYLQEVSRALQLDGKGADKKYTGIWDCAKKTVKSHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVYRGGDSTAHVPKYMVGVFGAVAGAASVFGNTPLDVVKTRMQGLEAARYKNTLDCAVQIWKHEGPAAFYKGTVPRLGRVCLDVAITFMIYDSFMEVFNKSKNIESCIDLLDLWFEYFRFGAFEQLKNQAVDSQGNLSPGMRVLCGLGAGICEAIFAVTPMETVKVKFINDQRSPNPRFKGFFHGTGLIIKEEGKVALTLVIEEKECFQHINK
***GGIEICITFPTEYVKTQLQLDGKGADKKYTGIWDCAKKTVKSHGLYLQEVSRALQLDGKGADKKYTGIWDCAKKTVKSHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVYRGGDSTAHVPKYMVGVFGAVAGAASVFGNTPLDVVKTRMQGLEAARYKNTLDCAVQIWKHEGPAAFYKGTVPRLGRVCLDVAITFMIYDSFMEVFNKSKN******LLDLWFEYFRFGAFEQLKNQAVDSQGNLSPGMRVLCGLGAGICEAIFAVTPMETVKVKFINDQRSPNPRFKGFFHGTGLIIKEEGKVALTLVIEEKECFQHINK
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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GITGGIEICITFPTEYVKTQLQLDGKGADKKYTGIWDCAKKTVKSHGLYLQEVSRALQLDGKGADKKYTGIWDCAKKTVKSHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVYRGGDSTAHVPKYMVGVFGAVAGAASVFGNTPLDVVKTRMQGLEAARYKNTLDCAVQIWKHEGPAAFYKGTVPRLGRVCLDVAITFMIYDSFMEVFNKSKNIESCIDLLDLWFEYFRFGAFEQLKNQAVDSQGNLSPGMRVLCGLGAGICEAIFAVTPMETVKVKFINDQRSPNPRFKGFFHGTGLIIKEEGKVALTLVIEEKECFQHINK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query326 2.2.26 [Sep-21-2011]
P79110311 Tricarboxylate transport yes N/A 0.653 0.684 0.478 1e-62
P32089311 Tricarboxylate transport yes N/A 0.653 0.684 0.489 2e-62
P53007311 Tricarboxylate transport yes N/A 0.653 0.684 0.459 3e-57
P34519312 Putative tricarboxylate t yes N/A 0.349 0.365 0.684 2e-53
O13844291 Uncharacterized mitochond yes N/A 0.638 0.714 0.284 1e-23
P38152299 Tricarboxylate transport yes N/A 0.487 0.531 0.325 3e-20
Q54B67301 Mitochondrial substrate c yes N/A 0.420 0.455 0.345 2e-19
P33303322 Succinate/fumarate mitoch no N/A 0.447 0.453 0.328 7e-16
Q10248298 Uncharacterized mitochond no N/A 0.478 0.523 0.319 1e-14
Q86AV5301 Mitochondrial substrate c no N/A 0.619 0.671 0.271 2e-14
>sp|P79110|TXTP_BOVIN Tricarboxylate transport protein, mitochondrial OS=Bos taurus GN=SLC25A1 PE=2 SV=1 Back     alignment and function desciption
 Score =  239 bits (611), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 131/274 (47%), Positives = 161/274 (58%), Gaps = 61/274 (22%)

Query: 1   GITGGIEICITFPTEYVKTQLQLDGKGADKKYTGIWDCAKKTVKSHGL------------ 48
           G+ GGIEICITFPTEYVKTQLQLD +    +Y GI DC ++TV+SHGL            
Sbjct: 33  GLAGGIEICITFPTEYVKTQLQLDERSHPPRYRGIGDCVRQTVRSHGLLGLYRGLSSLLY 92

Query: 49  --------------YLQEVSRALQ---------LDGKGADKKYTGIWDCAKKTVK----- 80
                         +L    R  Q         L G GA      +  C  +T+K     
Sbjct: 93  GSIPKAAVRFGTFEFLSNHMRDAQGRLDSTRGLLCGLGAGVPEAVVVVCPMETIKVKFIH 152

Query: 81  ---------------------SHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVYRGG 119
                                  G KG YQGL+AT+LKQGSNQ IRFFVM ++++ YRG 
Sbjct: 153 DQTSASPKYRGFFHGVREIVREQGLKGTYQGLTATVLKQGSNQGIRFFVMTSLRNWYRGD 212

Query: 120 DSTAHVPKYMVGVFGAVAGAASVFGNTPLDVVKTRMQGLEAARYKNTLDCAVQIWKHEGP 179
           +    +   + GVFGA+AGAASVFGNTPLDV+KTRMQGLEA +Y+NTLDC +QI ++EG 
Sbjct: 213 NPNKPMNPLITGVFGAIAGAASVFGNTPLDVIKTRMQGLEAHKYRNTLDCGLQILRNEGL 272

Query: 180 AAFYKGTVPRLGRVCLDVAITFMIYDSFMEVFNK 213
            AFYKGTVPRLGRVCLDVAI F+IYD  +++ NK
Sbjct: 273 KAFYKGTVPRLGRVCLDVAIVFIIYDEVVKLLNK 306




Involved in citrate-H(+)/malate exchange. Important for the bioenergetics of hepatic cells as it provides a carbon source for fatty acid and sterol biosyntheses, and NAD(+) for the glycolytic pathway.
Bos taurus (taxid: 9913)
>sp|P32089|TXTP_RAT Tricarboxylate transport protein, mitochondrial OS=Rattus norvegicus GN=Slc25a1 PE=1 SV=1 Back     alignment and function description
>sp|P53007|TXTP_HUMAN Tricarboxylate transport protein, mitochondrial OS=Homo sapiens GN=SLC25A1 PE=1 SV=2 Back     alignment and function description
>sp|P34519|TXTP_CAEEL Putative tricarboxylate transport protein, mitochondrial OS=Caenorhabditis elegans GN=K11H3.3 PE=3 SV=1 Back     alignment and function description
>sp|O13844|YFG5_SCHPO Uncharacterized mitochondrial carrier C19G12.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC19G12.05 PE=3 SV=1 Back     alignment and function description
>sp|P38152|TXTP_YEAST Tricarboxylate transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CTP1 PE=2 SV=3 Back     alignment and function description
>sp|Q54B67|MCFZ_DICDI Mitochondrial substrate carrier family protein Z OS=Dictyostelium discoideum GN=mcfZ PE=2 SV=1 Back     alignment and function description
>sp|P33303|SFC1_YEAST Succinate/fumarate mitochondrial transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SFC1 PE=1 SV=2 Back     alignment and function description
>sp|Q10248|YD1K_SCHPO Uncharacterized mitochondrial carrier C4G9.20c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4G9.20c PE=3 SV=2 Back     alignment and function description
>sp|Q86AV5|MCFX_DICDI Mitochondrial substrate carrier family protein X OS=Dictyostelium discoideum GN=mcfX PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query326
170056438325 tricarboxylate transport protein, mitoch 0.653 0.655 0.572 4e-71
312377555326 hypothetical protein AND_11111 [Anophele 0.653 0.653 0.582 6e-70
157111903321 tricarboxylate transport protein [Aedes 0.653 0.663 0.558 7e-69
357618091317 putative tricarboxylate transport protei 0.644 0.662 0.538 1e-68
427796343290 Putative tricarboxylate transport protei 0.653 0.734 0.524 3e-67
194744333311 GF16639 [Drosophila ananassae] gi|190627 0.653 0.684 0.529 2e-65
346469617321 hypothetical protein [Amblyomma maculatu 0.647 0.657 0.525 3e-65
91084971313 PREDICTED: similar to tricarboxylate tra 0.647 0.674 0.521 1e-64
328720505316 PREDICTED: tricarboxylate transport prot 0.662 0.683 0.505 3e-64
307206507337 Putative tricarboxylate transport protei 0.622 0.602 0.535 5e-64
>gi|170056438|ref|XP_001864030.1| tricarboxylate transport protein, mitochondrial [Culex quinquefasciatus] gi|167876127|gb|EDS39510.1| tricarboxylate transport protein, mitochondrial [Culex quinquefasciatus] Back     alignment and taxonomy information
 Score =  274 bits (700), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 157/274 (57%), Positives = 179/274 (65%), Gaps = 61/274 (22%)

Query: 1   GITGGIEICITFPTEYVKTQLQLDGKGADKKYTGIWDCAKKTVKSHGLY----------- 49
           GITGGIEICITFPTEYVKTQLQLD KGA K+Y GI DC KKTVK++G +           
Sbjct: 49  GITGGIEICITFPTEYVKTQLQLDEKGATKQYNGIADCVKKTVKTNGFFGLYRGLSVLLY 108

Query: 50  -------------------LQEVSRALQLDGK---------------------------- 62
                              L E +  L   GK                            
Sbjct: 109 GSIPKSAVRFGAFETFKGQLMEPNGTLSTSGKLLAGLGAGVAEAILAVTPMETVKVKFIN 168

Query: 63  ---GADKKYTGIWDCAKKTVKSHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVYRGG 119
                + KY G +      VK  GF GVY+GL+ATI+KQGSNQAIRF+VMET+K+VY+GG
Sbjct: 169 DQRSGNPKYKGFFHGVGMIVKQEGFSGVYKGLTATIMKQGSNQAIRFYVMETLKEVYKGG 228

Query: 120 DSTAHVPKYMVGVFGAVAGAASVFGNTPLDVVKTRMQGLEAARYKNTLDCAVQIWKHEGP 179
           D +  VPK +VG FGAVAGAASVFGNTP+DVVKTRMQGLEAA+YKNT+DCAVQIWK+EGP
Sbjct: 229 DQSKPVPKMVVGAFGAVAGAASVFGNTPIDVVKTRMQGLEAAKYKNTVDCAVQIWKNEGP 288

Query: 180 AAFYKGTVPRLGRVCLDVAITFMIYDSFMEVFNK 213
            AFYKGTVPRL RVCLDVAITFMIYDSFM++FNK
Sbjct: 289 MAFYKGTVPRLSRVCLDVAITFMIYDSFMDLFNK 322




Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312377555|gb|EFR24364.1| hypothetical protein AND_11111 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|157111903|ref|XP_001657348.1| tricarboxylate transport protein [Aedes aegypti] gi|108878247|gb|EAT42472.1| AAEL005991-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|357618091|gb|EHJ71185.1| putative tricarboxylate transport protein [Danaus plexippus] Back     alignment and taxonomy information
>gi|427796343|gb|JAA63623.1| Putative tricarboxylate transport protein mitochondrial, partial [Rhipicephalus pulchellus] Back     alignment and taxonomy information
>gi|194744333|ref|XP_001954649.1| GF16639 [Drosophila ananassae] gi|190627686|gb|EDV43210.1| GF16639 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|346469617|gb|AEO34653.1| hypothetical protein [Amblyomma maculatum] Back     alignment and taxonomy information
>gi|91084971|ref|XP_972074.1| PREDICTED: similar to tricarboxylate transport protein [Tribolium castaneum] gi|270008543|gb|EFA04991.1| hypothetical protein TcasGA2_TC015070 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|328720505|ref|XP_001951190.2| PREDICTED: tricarboxylate transport protein, mitochondrial-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|307206507|gb|EFN84533.1| Putative tricarboxylate transport protein, mitochondrial [Harpegnathos saltator] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query326
FB|FBgn0037912317 sea "scheggia" [Drosophila mel 0.472 0.485 0.616 8.7e-67
UNIPROTKB|F1P0C8317 SLC25A1 "Uncharacterized prote 0.450 0.463 0.564 1.8e-58
UNIPROTKB|F1MXY8310 SLC25A1 "Tricarboxylate transp 0.472 0.496 0.532 4.2e-57
UNIPROTKB|P79110311 SLC25A1 "Tricarboxylate transp 0.472 0.495 0.525 5.4e-57
UNIPROTKB|P53007311 SLC25A1 "Tricarboxylate transp 0.472 0.495 0.525 3.8e-56
UNIPROTKB|F1RK74308 SLC25A1 "Uncharacterized prote 0.472 0.5 0.512 4.8e-56
ZFIN|ZDB-GENE-040426-1172359 slc25a1a "solute carrier famil 0.447 0.406 0.527 7.8e-56
UNIPROTKB|F1P808331 SLC25A1 "Uncharacterized prote 0.450 0.444 0.530 9.9e-56
UNIPROTKB|F1M1U5272 F1M1U5 "Uncharacterized protei 0.466 0.558 0.480 6.8e-51
ZFIN|ZDB-GENE-081104-41216 si:dkey-178e17.1 "si:dkey-178e 0.475 0.717 0.522 2.5e-42
FB|FBgn0037912 sea "scheggia" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 497 (180.0 bits), Expect = 8.7e-67, Sum P(2) = 8.7e-67
 Identities = 95/154 (61%), Positives = 115/154 (74%)

Query:    60 DGKGADKKYTGIWDCAKKTVKSHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVYRGG 119
             D +  + K+ G      + +KS G  G+Y+GL+ TILKQGSNQAIRFFV+E++KD+Y+G 
Sbjct:   161 DQRSGNPKFRGFAHGVGQIIKSEGISGIYKGLTPTILKQGSNQAIRFFVLESLKDLYKGD 220

Query:   120 DSTAHVPKYMXXXXXXXXXXXXXXXNTPLDVVKTRMQGLEAARYKNTLDCAVQIWKHEGP 179
             D T  VPK +               NTPLDVVKTRMQGLEA++YKNT  CAV+I K+EGP
Sbjct:   221 DHTKPVPKLVVGVFGAIAGAASVFGNTPLDVVKTRMQGLEASKYKNTAHCAVEILKNEGP 280

Query:   180 AAFYKGTVPRLGRVCLDVAITFMIYDSFMEVFNK 213
             AAFYKGTVPRLGRVCLDVAITFMIYDSFM++FNK
Sbjct:   281 AAFYKGTVPRLGRVCLDVAITFMIYDSFMDLFNK 314


GO:0005371 "tricarboxylate secondary active transmembrane transporter activity" evidence=ISS
GO:0005740 "mitochondrial envelope" evidence=ISS
GO:0022857 "transmembrane transporter activity" evidence=ISS
GO:0005811 "lipid particle" evidence=IDA
GO:0006843 "mitochondrial citrate transport" evidence=IMP
GO:0016006 "Nebenkern" evidence=IDA
GO:0005739 "mitochondrion" evidence=IDA
GO:0015746 "citrate transport" evidence=IDA
UNIPROTKB|F1P0C8 SLC25A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1MXY8 SLC25A1 "Tricarboxylate transport protein, mitochondrial" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P79110 SLC25A1 "Tricarboxylate transport protein, mitochondrial" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P53007 SLC25A1 "Tricarboxylate transport protein, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RK74 SLC25A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1172 slc25a1a "solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1P808 SLC25A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1M1U5 F1M1U5 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-081104-41 si:dkey-178e17.1 "si:dkey-178e17.1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P53007TXTP_HUMANNo assigned EC number0.45980.65330.6848yesN/A
P32089TXTP_RATNo assigned EC number0.48900.65330.6848yesN/A
P79110TXTP_BOVINNo assigned EC number0.47810.65330.6848yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query326
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 5e-24
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 7e-16
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 9e-13
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 7e-10
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-08
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 93.9 bits (234), Expect = 5e-24
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 3/85 (3%)

Query: 134 GAVAGAASVFGNTPLDVVKTRMQGLEAA---RYKNTLDCAVQIWKHEGPAAFYKGTVPRL 190
           G +AGA +     PLDVVKTR+Q   A    +YK  LDC  +I+K EG    YKG +P L
Sbjct: 12  GGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLYKGLLPNL 71

Query: 191 GRVCLDVAITFMIYDSFMEVFNKSK 215
            RV    AI F  Y++  ++  K  
Sbjct: 72  LRVAPAAAIYFGTYETLKKLLLKKL 96


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 326
KOG0752|consensus320 100.0
KOG0753|consensus317 100.0
KOG0764|consensus299 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0754|consensus294 100.0
KOG0760|consensus302 100.0
KOG0758|consensus297 100.0
KOG0759|consensus286 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0757|consensus319 100.0
KOG0762|consensus311 100.0
KOG0761|consensus361 100.0
KOG0751|consensus694 100.0
KOG0768|consensus323 100.0
KOG0770|consensus353 100.0
KOG0765|consensus333 100.0
KOG0036|consensus463 100.0
KOG0755|consensus320 100.0
KOG0766|consensus297 100.0
KOG0769|consensus308 100.0
KOG0763|consensus301 100.0
KOG0756|consensus299 100.0
KOG0750|consensus304 100.0
KOG0749|consensus298 100.0
KOG0767|consensus333 100.0
KOG0752|consensus320 100.0
KOG0764|consensus299 100.0
KOG0753|consensus317 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0759|consensus286 100.0
KOG0757|consensus319 100.0
KOG0768|consensus323 99.97
PTZ00168259 mitochondrial carrier protein; Provisional 99.97
KOG0760|consensus302 99.97
KOG0758|consensus297 99.97
KOG0762|consensus311 99.97
KOG0754|consensus294 99.96
KOG0756|consensus299 99.95
KOG0761|consensus361 99.95
KOG0750|consensus304 99.94
KOG0765|consensus333 99.94
KOG0751|consensus694 99.93
KOG0749|consensus298 99.93
KOG0755|consensus320 99.92
KOG0036|consensus463 99.92
KOG0763|consensus301 99.91
KOG0766|consensus297 99.91
KOG0769|consensus 308 99.9
KOG0770|consensus353 99.9
KOG2745|consensus321 99.89
KOG0767|consensus 333 99.87
KOG1519|consensus297 99.74
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.7
KOG1519|consensus297 99.66
KOG2745|consensus 321 99.65
KOG2954|consensus427 99.64
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.59
KOG2954|consensus427 98.9
>KOG0752|consensus Back     alignment and domain information
Probab=100.00  E-value=5.8e-54  Score=373.14  Aligned_cols=254  Identities=25%  Similarity=0.404  Sum_probs=223.7

Q ss_pred             CchhhhHHHhhcchhHHHHHHhcCCCCCCCCCCCHHHHHHHhhhhccchHHHHHHHHHhhccCCCCCCCCHHHHHHHHHH
Q psy13180          1 GITGGIEICITFPTEYVKTQLQLDGKGADKKYTGIWDCAKKTVKSHGLYLQEVSRALQLDGKGADKKYTGIWDCAKKTVK   80 (326)
Q Consensus         1 ~~ag~~~~~~~~Pld~ik~r~q~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   80 (326)
                      |+||+++..++.|||+||+|+|++.++.                                   ...+++++++.+++|++
T Consensus        35 gvAGavsrt~~APLd~iKIlfQ~~~~~~-----------------------------------~~~k~~g~~~~~~~I~~   79 (320)
T KOG0752|consen   35 GVAGAVSRTVTAPLDRIKILFQVQVEPS-----------------------------------KTSKYPGVIQAFKSIYR   79 (320)
T ss_pred             hHHHHHHHHhcCchhHceEEEEeccccc-----------------------------------cccccccHHHHHHHHHH
Confidence            5799999999999999999999997631                                   14568899999999999


Q ss_pred             hcCccccccchHHHHHhHhhhhHHHHHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHHhhcCcHHHHHHHHhcCCC
Q psy13180         81 SHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVYRGGDSTAHVPKYMVGVFGAVAGAASVFGNTPLDVVKTRMQGLEA  160 (326)
Q Consensus        81 ~~G~~gLyrG~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~v~~Pld~ik~r~q~~~~  160 (326)
                      +||++|||||..+++++.+|+.+++|..||.++++....++....++...++||++||+++++++||+|++|+|+-.+++
T Consensus        80 eEG~~g~wkGn~~~~~r~~pY~avqf~aye~~k~~~~~~~~~~~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~  159 (320)
T KOG0752|consen   80 EEGLRGFWKGNGPAQIRIIPYGAVQFSAYEQYKKLVLGVDPNGSLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGE  159 (320)
T ss_pred             HhchhhhhcCcccceeeeeecchhhhhHHHHhhhhhhccCcccccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecc
Confidence            99999999999999999999999999999999985443333335688899999999999999999999999999988755


Q ss_pred             C-CCCCHHHHHHHHHHhcCccccccchhhhhhHHHHHHHHHHHHHHHHHHH-HhhcccchhhhhhhhhhHHHHhhhhHHH
Q psy13180        161 A-RYKNTLDCAVQIWKHEGPAAFYKGTVPRLGRVCLDVAITFMIYDSFMEV-FNKSKNIESCIDLLDLWFEYFRFGAFEQ  238 (326)
Q Consensus       161 ~-~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (326)
                      . .|+++++++++|+++||++|||||+.|++++.+|+.++.|.+||.++++ +.+.                        
T Consensus       160 ~~~y~~l~~a~~~I~~~eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~------------------------  215 (320)
T KOG0752|consen  160 LKVYRGLLHAFKTIYREEGIRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLKS------------------------  215 (320)
T ss_pred             cccCCcHHHHHHHHHHhcchhhhhcCcchhhheehhhhhhHHHHHHHHHHhhcccc------------------------
Confidence            4 7999999999999999999999999999999999999999999999996 2222                        


Q ss_pred             HHHHHhhcCCCCCCchhhhhhcccccccceeeeCchhhhHHHhhcCCCC---CCCcccccchhhhhHhhchhhhHHHHhh
Q psy13180        239 LKNQAVDSQGNLSPGMRVLCGLGAGICEAIFAVTPMETVKVKFINDQRS---PNPRFKGFFHGTGLIIKEEGKVALTLVI  315 (326)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~v~~Pldvirtr~q~~~~~---~~~~~~~~~~~~~~i~~~eG~~gly~G~  315 (326)
                            ..++..+.+..+++|++||++++ .++||||+||+|||+.+..   ...+|.+++||++.|+++||+.|||||+
T Consensus       216 ------~~~~~~~~~~~l~~GalAG~~aq-ti~yPlD~vRrrmQ~~~~~~~~~~~~~~~~~~~~~~i~~~EG~~gLYkGl  288 (320)
T KOG0752|consen  216 ------SGNKELSNFERLLCGALAGAVAQ-TITYPLDTVRRRMQLGGLKYFGGGFRYKGVLDAFRQIVKTEGVKGLYKGL  288 (320)
T ss_pred             ------cccchhhhHHHHHHHHHHHHHHh-hhcccHHHHHHHHhccCccccccccccccHHHHHHHHHHHhhhhhhhccc
Confidence                  12234566788999999999998 8999999999999998853   3346789999999999999999999999


Q ss_pred             hhhHh
Q psy13180        316 EEKEC  320 (326)
Q Consensus       316 ~~r~~  320 (326)
                      .|-++
T Consensus       289 ~p~~l  293 (320)
T KOG0752|consen  289 SPNLL  293 (320)
T ss_pred             cHHHH
Confidence            99765



>KOG0753|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query326
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 3e-10
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 6e-07
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 3e-09
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Iteration: 1

Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/212 (24%), Positives = 86/212 (40%), Gaps = 47/212 (22%) Query: 1 GITGGIEICITFPTEYVKTQLQLD-GKGADKKYTGIWDCAKKTVKSHGLYLQEVSRALQL 59 G G +C +P ++ +T+L D GKGA Sbjct: 120 GAAGATSLCFVYPLDFARTRLAADVGKGA------------------------------- 148 Query: 60 DGKGADKKYTGIWDCAKKTVKSHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVYRGG 119 A +++TG+ +C K KS G +G+YQG + ++ +A F V +T K + Sbjct: 149 ----AQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP 204 Query: 120 DSTAHVPKYMXXXXXXXXXXXXXXXNTPLDVVKTRMQGLEAAR------YKNTLDCAVQI 173 + + +M + P D V+ RM +++ R Y T+DC +I Sbjct: 205 KNVHIIVSWM---IAQTVTAVAGLVSYPFDTVRRRMM-MQSGRKGADIMYTGTVDCWRKI 260 Query: 174 WKHEGPAAFYKGTVPRLGRVCLDVAITFMIYD 205 K EGP AF+KG + R + A ++YD Sbjct: 261 AKDEGPKAFFKGAWSNVLR-GMGGAFVLVLYD 291
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query326
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-43
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 4e-40
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 1e-32
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 7e-04
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 7e-39
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-37
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-20
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score =  150 bits (381), Expect = 2e-43
 Identities = 68/315 (21%), Positives = 115/315 (36%), Gaps = 70/315 (22%)

Query: 1   GITGGIEICITFPTEYVKTQLQLDGKGADKKYTGIWDCAKKTVKSHGLYLQEVSRALQLD 60
           G    I   ITFP +  K +LQ+ G+                                L 
Sbjct: 9   GTAACIADLITFPLDTAKVRLQIQGESQ-----------------------------GLV 39

Query: 61  GKGADKKYTGIWDCAKKTVKSHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVYRGGD 120
              A  +Y G+       V++ G + +Y GL A + +Q S  ++R  + +++K  Y  G 
Sbjct: 40  RTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGS 99

Query: 121 STAHVPKYMVGVFGAVAGAASVFGNTPLDVVKTRMQ----GLEAARYKNTLDCAVQIWKH 176
             A +   +  + G+  GA +V    P DVVK R Q         RY++T++    I + 
Sbjct: 100 EHAGIGSRL--LAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIARE 157

Query: 177 EGPAAFYKGTVPRLGRVCLDVAITFMIYDSFMEVFNKSKNIESCIDLLDLWFEYFRFGAF 236
           EG    +KGT P + R  +      + YD   +   K+  +    D L   F        
Sbjct: 158 EGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMT---DDLPCHF-------- 206

Query: 237 EQLKNQAVDSQGNLSPGMRVLCGLGAGICEAIFAVTPMETVKVKFINDQRSPNPRFKGFF 296
                                   GAG C      +P++ VK +++N   S   ++    
Sbjct: 207 --------------------TSAFGAGFC-TTVIASPVDVVKTRYMN---SALGQYHSAG 242

Query: 297 HGTGLIIKEEGKVAL 311
           H    ++++EG  A 
Sbjct: 243 HCALTMLRKEGPRAF 257


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query326
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=1.7e-51  Score=367.51  Aligned_cols=255  Identities=22%  Similarity=0.299  Sum_probs=216.0

Q ss_pred             CchhhhHHHhhcchhHHHHHHhcCCCCCCCCCCCHHHHHHHhhhhccchHHHHHHHHHhhccCCCCCCCCHHHHHHHHHH
Q psy13180          1 GITGGIEICITFPTEYVKTQLQLDGKGADKKYTGIWDCAKKTVKSHGLYLQEVSRALQLDGKGADKKYTGIWDCAKKTVK   80 (326)
Q Consensus         1 ~~ag~~~~~~~~Pld~ik~r~q~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   80 (326)
                      ++||+++.++++|||+||+|+|++....+.                                .....|++.++++++|++
T Consensus        15 ~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~--------------------------------~~~~~~~~~~~~~~~i~~   62 (297)
T 1okc_A           15 GVAAAISKTAVAPIERVKLLLQVQHASKQI--------------------------------SAEKQYKGIIDCVVRIPK   62 (297)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHGGGCSSC--------------------------------CGGGSCCSHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCcHHHHHHHHHhccccccc--------------------------------ccccccccHHHHHHHHHh
Confidence            367888999999999999999998542110                                012458899999999999


Q ss_pred             hcCccccccchHHHHHhHhhhhHHHHHHHHHHHHHh-cCCCCCCC--chhHHHHHHHHHHHHHHHhhcCcHHHHHHHHhc
Q psy13180         81 SHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVY-RGGDSTAH--VPKYMVGVFGAVAGAASVFGNTPLDVVKTRMQG  157 (326)
Q Consensus        81 ~~G~~gLyrG~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~g~~ag~~~~~v~~Pld~ik~r~q~  157 (326)
                      +||++|||||+.+++++.++..+++|.+||.+++.+ ...+....  ......+++|++||++++++++|+|+||+|+|.
T Consensus        63 ~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~  142 (297)
T 1okc_A           63 EQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAA  142 (297)
T ss_dssp             HHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchhheecccHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhc
Confidence            999999999999999999999999999999999954 33222221  234667899999999999999999999999998


Q ss_pred             CC-----CCCCCCHHHHHHHHHHhcCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhHHHHh
Q psy13180        158 LE-----AARYKNTLDCAVQIWKHEGPAAFYKGTVPRLGRVCLDVAITFMIYDSFMEVFNKSKNIESCIDLLDLWFEYFR  232 (326)
Q Consensus       158 ~~-----~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (326)
                      +.     ...|+++++++++|+++||++|||||+.+++++.+|..++.|.+||.+++.+.+.                  
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~------------------  204 (297)
T 1okc_A          143 DVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP------------------  204 (297)
T ss_dssp             CCCSSTTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG------------------
T ss_pred             cccCCCcCcCCCCHHHHHHHHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccC------------------
Confidence            64     2468999999999999999999999999999999999999999999999865321                  


Q ss_pred             hhhHHHHHHHHhhcCCCCCCchhhhhhcccccccceeeeCchhhhHHHhhcCCCCC--CCcccccchhhhhHhhchhhhH
Q psy13180        233 FGAFEQLKNQAVDSQGNLSPGMRVLCGLGAGICEAIFAVTPMETVKVKFINDQRSP--NPRFKGFFHGTGLIIKEEGKVA  310 (326)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~v~~Pldvirtr~q~~~~~~--~~~~~~~~~~~~~i~~~eG~~g  310 (326)
                                     ...+....+++|+++|++++ ++++|+|+||+|||.+....  ...|.+++||+++|+++||++|
T Consensus       205 ---------------~~~~~~~~~~~g~~ag~~a~-~~t~P~dvvktr~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~g  268 (297)
T 1okc_A          205 ---------------KNVHIIVSWMIAQTVTAVAG-LVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKA  268 (297)
T ss_dssp             ---------------GCSCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGG
T ss_pred             ---------------CCccHHHHHHHHHHHHHHHH-HhcChHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHcCcCe
Confidence                           01234557889999999998 89999999999999875432  2479999999999999999999


Q ss_pred             HHHhhhhhHhh
Q psy13180        311 LTLVIEEKECF  321 (326)
Q Consensus       311 ly~G~~~r~~~  321 (326)
                      ||||+.|+++-
T Consensus       269 lyrG~~~~~~r  279 (297)
T 1okc_A          269 FFKGAWSNVLR  279 (297)
T ss_dssp             GGTTHHHHHHH
T ss_pred             EecchHHHHHh
Confidence            99999999875



>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 326
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 4e-16
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-13
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-08
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 5e-04
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 75.1 bits (183), Expect = 4e-16
 Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 9/179 (5%)

Query: 32  YTGIWDCAKKTVKSHGLYLQEVSRALQLDGKGADKKYTGIWDCAKKTVKSHGFKGVYQGL 91
            +G    A      + L       A  +    A +++TG+ +C  K  KS G +G+YQG 
Sbjct: 116 ASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGF 175

Query: 92  SATILKQGSNQAIRFFVMETMKDVYRGGDSTAHVPKYMVGVFGAVAGAASVFGNTPLDVV 151
           + ++      +A  F V +T K +     +   +  +M         A +   + P D V
Sbjct: 176 NVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWM---IAQTVTAVAGLVSYPFDTV 232

Query: 152 KTRMQ-----GLEAARYKNTLDCAVQIWKHEGPAAFYKGTVPRLGRVCLDVAITFMIYD 205
           + RM            Y  T+DC  +I K EGP AF+KG    + R  +  A   ++YD
Sbjct: 233 RRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRG-MGGAFVLVLYD 290


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query326
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.96
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=1.6e-47  Score=338.70  Aligned_cols=255  Identities=22%  Similarity=0.297  Sum_probs=219.0

Q ss_pred             CchhhhHHHhhcchhHHHHHHhcCCCCCCCCCCCHHHHHHHhhhhccchHHHHHHHHHhhccCCCCCCCCHHHHHHHHHH
Q psy13180          1 GITGGIEICITFPTEYVKTQLQLDGKGADKKYTGIWDCAKKTVKSHGLYLQEVSRALQLDGKGADKKYTGIWDCAKKTVK   80 (326)
Q Consensus         1 ~~ag~~~~~~~~Pld~ik~r~q~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   80 (326)
                      ++||+++.+++||||+||+|+|+++......                                ....+++.+++++++++
T Consensus        14 ~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~--------------------------------~~~~~~~~~~~~~~i~~   61 (292)
T d1okca_          14 GVAAAISKTAVAPIERVKLLLQVQHASKQIS--------------------------------AEKQYKGIIDCVVRIPK   61 (292)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHGGGCSSCC--------------------------------GGGSCCSHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhHHHHHHHHHhcCCCCCCCC--------------------------------cccccCCHHHHHHHHHH
Confidence            4688899999999999999999986532211                                14568999999999999


Q ss_pred             hcCccccccchHHHHHhHhhhhHHHHHHHHHHHHHhcCCCCCCC---chhHHHHHHHHHHHHHHHhhcCcHHHHHHHHhc
Q psy13180         81 SHGFKGVYQGLSATILKQGSNQAIRFFVMETMKDVYRGGDSTAH---VPKYMVGVFGAVAGAASVFGNTPLDVVKTRMQG  157 (326)
Q Consensus        81 ~~G~~gLyrG~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~ag~~~~~v~~Pld~ik~r~q~  157 (326)
                      +||+++||||+.+.+++..+...++|.+|+.+++.+.+......   ......+.+|.+|++++.++++|+|++|+|+|.
T Consensus        62 ~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~  141 (292)
T d1okca_          62 EQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAA  141 (292)
T ss_dssp             HHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeec
Confidence            99999999999999999999999999999999998876543332   234556789999999999999999999999997


Q ss_pred             CC-----CCCCCCHHHHHHHHHHhcCccccccchhhhhhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhhHHHHh
Q psy13180        158 LE-----AARYKNTLDCAVQIWKHEGPAAFYKGTVPRLGRVCLDVAITFMIYDSFMEVFNKSKNIESCIDLLDLWFEYFR  232 (326)
Q Consensus       158 ~~-----~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (326)
                      +.     .+.|.+..+++++++++||+++||+|+.+++++.+++.++.|..||.+++.+.+.                  
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~------------------  203 (292)
T d1okca_         142 DVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP------------------  203 (292)
T ss_dssp             CCCSSTTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG------------------
T ss_pred             cccccccccccccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhcccc------------------
Confidence            53     3467899999999999999999999999999999999999999999998765432                  


Q ss_pred             hhhHHHHHHHHhhcCCCCCCchhhhhhcccccccceeeeCchhhhHHHhhcCCCCCC--CcccccchhhhhHhhchhhhH
Q psy13180        233 FGAFEQLKNQAVDSQGNLSPGMRVLCGLGAGICEAIFAVTPMETVKVKFINDQRSPN--PRFKGFFHGTGLIIKEEGKVA  310 (326)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~v~~Pldvirtr~q~~~~~~~--~~~~~~~~~~~~i~~~eG~~g  310 (326)
                                     ........++++++++++++ +++||+||||+|||.+.....  ..|.+++||++++++|||++|
T Consensus       204 ---------------~~~~~~~~~~~~~~~~~~a~-~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~  267 (292)
T d1okca_         204 ---------------KNVHIIVSWMIAQTVTAVAG-LVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKA  267 (292)
T ss_dssp             ---------------GCSCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGG
T ss_pred             ---------------cccchHHHHHHHHHHHHHHh-hccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCc
Confidence                           12234556788899999987 899999999999999876543  378999999999999999999


Q ss_pred             HHHhhhhhHhh
Q psy13180        311 LTLVIEEKECF  321 (326)
Q Consensus       311 ly~G~~~r~~~  321 (326)
                      ||||+.||++.
T Consensus       268 lyrG~~~~~~r  278 (292)
T d1okca_         268 FFKGAWSNVLR  278 (292)
T ss_dssp             GGTTHHHHHHH
T ss_pred             ccccHHHHHHH
Confidence            99999999876



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure