Psyllid ID: psy13191

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------14
Protein Sequence
LNFSPLSVTPPSQRVQFILGEDVDDASHHAHPLFSEMEELVRNGEEMEWKETARWIKFEEDVEEGGNRWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKLRTTESIPDHESSMGIWSMKKSMNNL
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHccccccccccccccHHHHHHHHHHccccccHHHHHHHEEEHHcccccccccccccHHEEcHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
lnfsplsvtppsqrvqfilgedvddashhahplFSEMEELVRNGEEMEWKETARWIKFEEDveeggnrwskphvatLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKLrttesipdhessmGIWSMKKSMNNL
Flexible Loop (DISEMBL)
lnfsplsvtppsQRVQFILGEDVDDASHHAHPLFSEMEELVRNGEEMEWKETARWIKFEEDVEEGGNRWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKLRttesipdhessmgiwsmkksmnnl
Low Complexity Region (SEG)
LNFSPLSVTPPSQRVQFILGEDVDDASHHAHPLFSEMEELVRNGEEMEWKETARWIKFEEDVEEGGNRWSKPHVATlslhslfelrslllNGCVMLDLEANSLEQIVDLFIEKLRTTESIPDHESSMGIWSMKKSMNNL
Disordered region (IsUnstruct)
****************FIL***************************MEWKETARWIKFEEDVEEGGNRWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKLRT***********************
Disordered Region (DISOPRED)
***********SQRVQFILGE****ASHHAHPLFSEMEELVRNGEEMEWKETARWIKFEEDVEEGGNRWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKLRTTESIPDHESSMG****K******
Disordered Region (DISEMBL)
LNFSPLSVTPPSQRVQFILGEDVDDASHHAHPLFSEMEELVRNGEEMEWKETARWIKFEEDVEEGGNRWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKLRTTESIPDHESSMGIWSMKKSMNNL
Disordered Region (DISPRO)
*****LSVTPPSQRVQFILGEDVDDASHHAHPLFSEMEELVRNGEEMEWKETARWIKFEEDVEEGGNRWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKLRTTESIPDHESSMGIWSMKKSM***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
LNFSPLSVTPPSQRVQFILGEDVDDASHHAHPLFSEMEELVRNGEEMEWKETARWIKFEEDVEEGGNRWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKLRTTESIPDHESSMGIWSMKKSMNNL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	139	2.2.26 [Sep-21-2011]
Q8BTY2	1034	Sodium bicarbonate cotran	no	N/A	0.805	0.108	0.637	4e-37
Q9R1N3	1218	Sodium bicarbonate cotran	yes	N/A	0.805	0.091	0.637	4e-37
Q9Y6M7	1214	Sodium bicarbonate cotran	yes	N/A	0.748	0.085	0.676	7e-37
Q80ZA5	1117	Sodium-driven chloride bi	no	N/A	0.769	0.095	0.638	3e-35
Q32LP4	1117	Sodium-driven chloride bi	no	N/A	0.769	0.095	0.638	3e-35
Q6U841	1118	Sodium-driven chloride bi	no	N/A	0.769	0.095	0.638	3e-35
Q5DTL9	1118	Sodium-driven chloride bi	no	N/A	0.769	0.095	0.629	4e-35
Q2Y0W8	1093	Electroneutral sodium bic	no	N/A	0.733	0.093	0.653	1e-33
Q6RVG2	1067	Electroneutral sodium bic	no	N/A	0.733	0.095	0.653	2e-33
Q8JZR6	1089	Electroneutral sodium bic	no	N/A	0.733	0.093	0.644	5e-33

>sp|Q8BTY2|S4A7_MOUSE Sodium bicarbonate cotransporter 3 OS=Mus musculus GN=Slc4a7 PE=1 SV=2

 Score =  152 bits (385), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 72/113 (63%), Positives = 92/113 (81%), Gaps = 1/113 (0%)

Query: 11  PSQRVQFILGEDVDDASHHAHPLFSEMEELV-RNGEEMEWKETARWIKFEEDVEEGGNRW 69
           PSQRVQFILG + DD  H  H LF+EM+EL  R+GEE EWKETARW+KFEEDVE+GG+RW
Sbjct: 95  PSQRVQFILGTEDDDEEHIPHDLFTEMDELCYRDGEEYEWKETARWLKFEEDVEDGGDRW 154

Query: 70  SKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKLRTTESIPD 122
           SKP+VATLSLHSLFELRS +LNG VMLD+ A++L++I D+ ++ +  +  + D
Sbjct: 155 SKPYVATLSLHSLFELRSCILNGTVMLDMRASTLDEIADMVLDNMIASGQLDD 207

Electroneutral sodium- and bicarbonate-dependent cotransporter with a Na(+):HCO3(-) 1:1 stoichiometry. Regulates intracellular pH and may play a role in bicarbonate salvage in secretory epithelia. May also have an associated sodium channel activity.
Mus musculus (taxid: 10090)

>sp|Q9R1N3|S4A7_RAT Sodium bicarbonate cotransporter 3 OS=Rattus norvegicus GN=Slc4a7 PE=1 SV=1

 Score =  152 bits (385), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 72/113 (63%), Positives = 92/113 (81%), Gaps = 1/113 (0%)

Query: 11  PSQRVQFILGEDVDDASHHAHPLFSEMEELV-RNGEEMEWKETARWIKFEEDVEEGGNRW 69
           PSQRVQFILG + DD  H  H LF+EM+EL  R+GEE EWKETARW+KFEEDVE+GG+RW
Sbjct: 95  PSQRVQFILGTEDDDEEHIPHDLFTEMDELCYRDGEEYEWKETARWLKFEEDVEDGGDRW 154

Query: 70  SKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKLRTTESIPD 122
           SKP+VATLSLHSLFELRS +LNG VMLD+ A++L++I D+ ++ +  +  + D
Sbjct: 155 SKPYVATLSLHSLFELRSCILNGTVMLDMRASTLDEIADMVLDNMIASGQLDD 207

Electroneutral sodium- and bicarbonate-dependent cotransporter with a Na(+):HCO3(-) 1:1 stoichiometry. Regulates intracellular pH and may play a role in bicarbonate salvage in secretory epithelia. May also have an associated sodium channel activity.

Rattus norvegicus (taxid: 10116)

>sp|Q9Y6M7|S4A7_HUMAN Sodium bicarbonate cotransporter 3 OS=Homo sapiens GN=SLC4A7 PE=1 SV=2

 Score =  152 bits (383), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 71/105 (67%), Positives = 89/105 (84%), Gaps = 1/105 (0%)

Query: 11  PSQRVQFILGEDVDDASHHAHPLFSEMEELV-RNGEEMEWKETARWIKFEEDVEEGGNRW 69
           PSQRVQFILG + DD  H  H LF+EM+EL  R+GEE EWKETARW+KFEEDVE+GG+RW
Sbjct: 90  PSQRVQFILGTEDDDEEHIPHDLFTEMDELCYRDGEEYEWKETARWLKFEEDVEDGGDRW 149

Query: 70  SKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKL 114
           SKP+VATLSLHSLFELRS +LNG VMLD+ A++L++I D+ ++ +
Sbjct: 150 SKPYVATLSLHSLFELRSCILNGTVMLDMRASTLDEIADMVLDNM 194

Electroneutral sodium- and bicarbonate-dependent cotransporter with a Na(+):HCO3(-) 1:1 stoichiometry. Regulates intracellular pH and may play a role in bicarbonate salvage in secretory epithelia. May also have an associated sodium channel activity.

Homo sapiens (taxid: 9606)

>sp|Q80ZA5|S4A10_RAT Sodium-driven chloride bicarbonate exchanger OS=Rattus norvegicus GN=Slc4a10 PE=2 SV=1

 Score =  147 bits (370), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 69/108 (63%), Positives = 88/108 (81%), Gaps = 1/108 (0%)

Query: 7   SVTPPSQRVQFILGEDVDDASHHAHPLFSEMEELV-RNGEEMEWKETARWIKFEEDVEEG 65
           S   PSQRVQFILG + DD  H  H LF+E++E+  R GE+ EW+ETARW+KFEEDVE+G
Sbjct: 91  SFDTPSQRVQFILGTEDDDEEHIPHDLFTELDEICWREGEDAEWRETARWLKFEEDVEDG 150

Query: 66  GNRWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEK 113
           G RWSKP+VATLSLHSLFELRS +LNG V+LD+ AN+LE+I D+ +++
Sbjct: 151 GERWSKPYVATLSLHSLFELRSCILNGTVLLDMHANTLEEIADMVLDQ 198

Electrogenic sodium/bicarbonate cotransporter in exchange for intracellular chloride. Plays an important role in regulating intracellular pH.

Rattus norvegicus (taxid: 10116)

>sp|Q32LP4|S4A10_BOVIN Sodium-driven chloride bicarbonate exchanger OS=Bos taurus GN=SLC4A10 PE=2 SV=1

 Score =  147 bits (370), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 69/108 (63%), Positives = 88/108 (81%), Gaps = 1/108 (0%)

Query: 7   SVTPPSQRVQFILGEDVDDASHHAHPLFSEMEELV-RNGEEMEWKETARWIKFEEDVEEG 65
           S   PSQRVQFILG + DD  H  H LF+E++E+  R GE+ EW+ETARW+KFEEDVE+G
Sbjct: 90  SFDTPSQRVQFILGTEDDDEEHIPHDLFTELDEICWREGEDAEWRETARWLKFEEDVEDG 149

Query: 66  GNRWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEK 113
           G RWSKP+VATLSLHSLFELRS +LNG V+LD+ AN+LE+I D+ +++
Sbjct: 150 GERWSKPYVATLSLHSLFELRSCILNGTVLLDMHANTLEEIADMVLDQ 197

Electrogenic sodium/bicarbonate cotransporter in exchange for intracellular chloride. Plays an important role in regulating intracellular pH.

Bos taurus (taxid: 9913)

>sp|Q6U841|S4A10_HUMAN Sodium-driven chloride bicarbonate exchanger OS=Homo sapiens GN=SLC4A10 PE=2 SV=1

 Score =  146 bits (369), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 69/108 (63%), Positives = 88/108 (81%), Gaps = 1/108 (0%)

Query: 7   SVTPPSQRVQFILGEDVDDASHHAHPLFSEMEELV-RNGEEMEWKETARWIKFEEDVEEG 65
           S   PSQRVQFILG + DD  H  H LF+E++E+  R GE+ EW+ETARW+KFEEDVE+G
Sbjct: 91  SFDTPSQRVQFILGTEDDDEEHIPHDLFTELDEICWREGEDAEWRETARWLKFEEDVEDG 150

Query: 66  GNRWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEK 113
           G RWSKP+VATLSLHSLFELRS +LNG V+LD+ AN+LE+I D+ +++
Sbjct: 151 GERWSKPYVATLSLHSLFELRSCILNGTVLLDMHANTLEEIADMVLDQ 198

Electrogenic sodium/bicarbonate cotransporter in exchange for intracellular chloride. Plays an important role in regulating intracellular pH.

Homo sapiens (taxid: 9606)

>sp|Q5DTL9|S4A10_MOUSE Sodium-driven chloride bicarbonate exchanger OS=Mus musculus GN=Slc4a10 PE=1 SV=2

 Score =  146 bits (368), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 68/108 (62%), Positives = 88/108 (81%), Gaps = 1/108 (0%)

Query: 7   SVTPPSQRVQFILGEDVDDASHHAHPLFSEMEELV-RNGEEMEWKETARWIKFEEDVEEG 65
           S   PSQRVQFILG + DD  H  H LF+E++E+  R GE+ EW+ETARW+KFEEDVE+G
Sbjct: 91  SFDTPSQRVQFILGTEDDDEEHLPHDLFTELDEICWREGEDAEWRETARWLKFEEDVEDG 150

Query: 66  GNRWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEK 113
           G RWSKP+VATLSLHSLFELRS +LNG V+LD+ AN++E+I D+ +++
Sbjct: 151 GERWSKPYVATLSLHSLFELRSCILNGTVLLDMHANTIEEIADMVLDQ 198

Electrogenic sodium/bicarbonate cotransporter in exchange for intracellular chloride. Plays an important role in regulating intracellular pH.

Mus musculus (taxid: 10090)

>sp|Q2Y0W8|S4A8_HUMAN Electroneutral sodium bicarbonate exchanger 1 OS=Homo sapiens GN=SLC4A8 PE=1 SV=1

 Score =  141 bits (356), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/104 (65%), Positives = 88/104 (84%), Gaps = 2/104 (1%)

Query: 11  PSQRVQFILGEDVDDASHHAHPLFSEMEEL-VRNGEEMEWKETARWIKFEEDVEEGGNRW 69
           PSQRVQFILG + +D  H  H LF+E++E+ ++ GE+ EWKETARW+KFEEDVE+GG RW
Sbjct: 95  PSQRVQFILGTE-EDEEHVPHELFTELDEICMKEGEDAEWKETARWLKFEEDVEDGGERW 153

Query: 70  SKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEK 113
           SKP+VATLSLHSLFELRS L+NG V+LD+ ANS+E+I DL +++
Sbjct: 154 SKPYVATLSLHSLFELRSCLINGTVLLDMHANSIEEISDLILDQ 197

Mediates electroneutral sodium- and carbonate-dependent chloride-HCO3(-) exchange with a Na(+):HCO3(-) stoichiometry of 2:1. Plays a major role in pH regulation in neurons. May be involved in cell pH regulation by transporting HCO3(-) from blood to cell. Enhanced expression in severe acid stress could be important for cell survival by mediating the influx of HCO3(-) into the cells. Also mediates lithium-dependent HCO3(-) cotransport. May be regulated by osmolarity.

Homo sapiens (taxid: 9606)

>sp|Q6RVG2|S4A8_RAT Electroneutral sodium bicarbonate exchanger 1 OS=Rattus norvegicus GN=Slc4a8 PE=1 SV=1

 Score =  140 bits (354), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/104 (65%), Positives = 88/104 (84%), Gaps = 2/104 (1%)

Query: 11  PSQRVQFILGEDVDDASHHAHPLFSEMEEL-VRNGEEMEWKETARWIKFEEDVEEGGNRW 69
           PSQRVQFILG + +D  H  H LF+E++E+ ++ GEE EWKETARW+KFEEDVE+GG RW
Sbjct: 95  PSQRVQFILGTE-EDEEHVPHELFTELDEICMKEGEEAEWKETARWLKFEEDVEDGGERW 153

Query: 70  SKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEK 113
           SKP+VATLSLHSLFELRS L+NG V+LD+ A+S+E+I DL +++
Sbjct: 154 SKPYVATLSLHSLFELRSCLINGSVLLDMRASSIEEISDLILDQ 197

Mediates electroneutral sodium- and carbonate-dependent chloride-HCO3(-) exchange with a Na(+):HCO3(-) stoichiometry of 2:1. Plays a major role in pH regulation in neurons. May be involved in cell pH regulation by transporting HCO3(-) from blood to cell. Enhanced expression in severe acid stress could be important for cell survival by mediating the influx of HCO3(-) into the cells. Also mediates lithium-dependent HCO3(-) cotransport. May be regulated by osmolarity.

Rattus norvegicus (taxid: 10116)

>sp|Q8JZR6|S4A8_MOUSE Electroneutral sodium bicarbonate exchanger 1 OS=Mus musculus GN=Slc4a8 PE=2 SV=1

 Score =  139 bits (350), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 67/104 (64%), Positives = 88/104 (84%), Gaps = 2/104 (1%)

Query: 11  PSQRVQFILGEDVDDASHHAHPLFSEMEEL-VRNGEEMEWKETARWIKFEEDVEEGGNRW 69
           PSQRVQFILG + +D  H  H LF+E++E+ ++ GE+ EWKETARW+KFEEDVE+GG RW
Sbjct: 95  PSQRVQFILGTE-EDEEHVPHELFTELDEICMKEGEDAEWKETARWLKFEEDVEDGGERW 153

Query: 70  SKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEK 113
           SKP+VATLSLHSLFELRS L+NG V+LD+ A+S+E+I DL +++
Sbjct: 154 SKPYVATLSLHSLFELRSCLINGSVLLDMRASSIEEISDLILDQ 197

Mediates electroneutral sodium- and carbonate-dependent chloride-HCO3(-) exchange with a Na(+):HCO3(-) stoichiometry of 2:1. Plays a major role in pH regulation in neurons. May be involved in cell pH regulation by transporting HCO3(-) from blood to cell. Enhanced expression in severe acid stress could be important for cell survival by mediating the influx of HCO3(-) into the cells. Also mediates lithium-dependent HCO3(-) cotransport. May be regulated by osmolarity.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	139
328792294	1228	PREDICTED: sodium bicarbonate cotranspor	0.820	0.092	0.780	3e-47
380012200	1241	PREDICTED: LOW QUALITY PROTEIN: sodium b	0.820	0.091	0.771	2e-46
350425262	1231	PREDICTED: sodium-driven chloride bicarb	0.820	0.092	0.771	2e-46
340709240	1231	PREDICTED: sodium-driven chloride bicarb	0.820	0.092	0.771	3e-46
345486203	1193	PREDICTED: sodium-driven chloride bicarb	0.769	0.089	0.822	3e-46
345486201	1203	PREDICTED: sodium-driven chloride bicarb	0.769	0.088	0.822	4e-46
307188091	1225	Sodium-driven chloride bicarbonate excha	0.820	0.093	0.771	5e-46
383864837	1229	PREDICTED: sodium-driven chloride bicarb	0.769	0.087	0.813	6e-46
332020115	1216	Sodium-driven chloride bicarbonate excha	0.769	0.087	0.813	6e-46
307213445	1196	Sodium-driven chloride bicarbonate excha	0.776	0.090	0.805	9e-46

>gi|328792294|ref|XP_393286.4| PREDICTED: sodium bicarbonate cotransporter 3-like isoform 1 [Apis mellifera]

 Score =  192 bits (488), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 89/114 (78%), Positives = 103/114 (90%)

Query: 8   VTPPSQRVQFILGEDVDDASHHAHPLFSEMEELVRNGEEMEWKETARWIKFEEDVEEGGN 67
           +TPP+QRVQFILGE+V D +H +HPLFSEMEELV++G+EMEWKETARWIKFEEDVEEGGN
Sbjct: 87  ITPPAQRVQFILGEEVGDDAHESHPLFSEMEELVKDGDEMEWKETARWIKFEEDVEEGGN 146

Query: 68  RWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKLRTTESIP 121
           RWSKPHVATLSLH+LFELRSLLLNG VMLD+EANSLEQI DL ++ +    S+P
Sbjct: 147 RWSKPHVATLSLHALFELRSLLLNGTVMLDMEANSLEQIADLVLDNMINKGSLP 200

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380012200|ref|XP_003690174.1| PREDICTED: LOW QUALITY PROTEIN: sodium bicarbonate cotransporter 3-like [Apis florea]

 Score =  189 bits (481), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 88/114 (77%), Positives = 102/114 (89%)

Query: 8   VTPPSQRVQFILGEDVDDASHHAHPLFSEMEELVRNGEEMEWKETARWIKFEEDVEEGGN 67
           +TPP+QRVQFILGE+V D +H +HPLFSEMEELV++G+EMEWKET RWIKFEEDVEEGGN
Sbjct: 100 ITPPAQRVQFILGEEVGDDAHESHPLFSEMEELVKDGDEMEWKETHRWIKFEEDVEEGGN 159

Query: 68  RWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKLRTTESIP 121
           RWSKPHVATLSLH+LFELRSLLLNG VMLD+EANSLEQI DL ++ +    S+P
Sbjct: 160 RWSKPHVATLSLHALFELRSLLLNGTVMLDMEANSLEQIADLVLDNMINKGSLP 213

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350425262|ref|XP_003494064.1| PREDICTED: sodium-driven chloride bicarbonate exchanger-like [Bombus impatiens]

 Score =  189 bits (481), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 88/114 (77%), Positives = 102/114 (89%)

Query: 8   VTPPSQRVQFILGEDVDDASHHAHPLFSEMEELVRNGEEMEWKETARWIKFEEDVEEGGN 67
           +TPP+QRVQFILGE+V D +H +HPLFSEMEELV++G+EMEWKETARWIKFEEDVEEGGN
Sbjct: 89  ITPPAQRVQFILGEEVGDDAHESHPLFSEMEELVKDGDEMEWKETARWIKFEEDVEEGGN 148

Query: 68  RWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKLRTTESIP 121
           RWSKPHVATLSLH+LFELRSLLLNG VMLD+EA SLEQI DL ++ +    S+P
Sbjct: 149 RWSKPHVATLSLHALFELRSLLLNGTVMLDMEAASLEQIADLVLDNMINKGSLP 202

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709240|ref|XP_003393219.1| PREDICTED: sodium-driven chloride bicarbonate exchanger-like [Bombus terrestris]

 Score =  189 bits (481), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 88/114 (77%), Positives = 102/114 (89%)

Query: 8   VTPPSQRVQFILGEDVDDASHHAHPLFSEMEELVRNGEEMEWKETARWIKFEEDVEEGGN 67
           +TPP+QRVQFILGE+V D +H +HPLFSEMEELV++G+EMEWKETARWIKFEEDVEEGGN
Sbjct: 89  ITPPAQRVQFILGEEVGDDAHESHPLFSEMEELVKDGDEMEWKETARWIKFEEDVEEGGN 148

Query: 68  RWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKLRTTESIP 121
           RWSKPHVATLSLH+LFELRSLLLNG VMLD+EA SLEQI DL ++ +    S+P
Sbjct: 149 RWSKPHVATLSLHALFELRSLLLNGTVMLDMEAASLEQIADLVLDNMINKGSLP 202

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345486203|ref|XP_003425423.1| PREDICTED: sodium-driven chloride bicarbonate exchanger-like isoform 3 [Nasonia vitripennis]

 Score =  189 bits (480), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 88/107 (82%), Positives = 99/107 (92%)

Query: 8   VTPPSQRVQFILGEDVDDASHHAHPLFSEMEELVRNGEEMEWKETARWIKFEEDVEEGGN 67
           VTPP+QRVQFILGEDV D +H +HPLFSEMEELV++G+EMEWKETARWIKFEEDVEEGGN
Sbjct: 96  VTPPAQRVQFILGEDVGDDAHESHPLFSEMEELVKDGDEMEWKETARWIKFEEDVEEGGN 155

Query: 68  RWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKL 114
           RWSKPHVATLSLHSLFELRSLLLNG VMLD+EA+ LEQI DL ++ +
Sbjct: 156 RWSKPHVATLSLHSLFELRSLLLNGTVMLDMEASGLEQITDLVLDNM 202

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345486201|ref|XP_001603420.2| PREDICTED: sodium-driven chloride bicarbonate exchanger-like isoform 1 [Nasonia vitripennis]

 Score =  189 bits (479), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 88/107 (82%), Positives = 99/107 (92%)

Query: 8   VTPPSQRVQFILGEDVDDASHHAHPLFSEMEELVRNGEEMEWKETARWIKFEEDVEEGGN 67
           VTPP+QRVQFILGEDV D +H +HPLFSEMEELV++G+EMEWKETARWIKFEEDVEEGGN
Sbjct: 106 VTPPAQRVQFILGEDVGDDAHESHPLFSEMEELVKDGDEMEWKETARWIKFEEDVEEGGN 165

Query: 68  RWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKL 114
           RWSKPHVATLSLHSLFELRSLLLNG VMLD+EA+ LEQI DL ++ +
Sbjct: 166 RWSKPHVATLSLHSLFELRSLLLNGTVMLDMEASGLEQITDLVLDNM 212

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307188091|gb|EFN72923.1| Sodium-driven chloride bicarbonate exchanger [Camponotus floridanus]

 Score =  188 bits (478), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 88/114 (77%), Positives = 101/114 (88%)

Query: 8   VTPPSQRVQFILGEDVDDASHHAHPLFSEMEELVRNGEEMEWKETARWIKFEEDVEEGGN 67
           +TPP+QRVQFILGE+V D +H +HPLFSEMEELV++G+EMEWKETARWIKFEEDVEEGGN
Sbjct: 84  ITPPAQRVQFILGEEVGDDAHESHPLFSEMEELVKDGDEMEWKETARWIKFEEDVEEGGN 143

Query: 68  RWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKLRTTESIP 121
           RWSKPHVATLSLHSLFELRSLLLNG VMLD+EA SLEQI DL ++ +     +P
Sbjct: 144 RWSKPHVATLSLHSLFELRSLLLNGTVMLDMEAASLEQIADLVLDNMINKGVLP 197

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383864837|ref|XP_003707884.1| PREDICTED: sodium-driven chloride bicarbonate exchanger [Megachile rotundata]

 Score =  188 bits (478), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 87/107 (81%), Positives = 99/107 (92%)

Query: 8   VTPPSQRVQFILGEDVDDASHHAHPLFSEMEELVRNGEEMEWKETARWIKFEEDVEEGGN 67
           +TPP+QRVQFILGE+V D +H +HPLFSEMEELV++G+EMEWKETARWIKFEEDVEEGGN
Sbjct: 87  ITPPAQRVQFILGEEVGDDAHESHPLFSEMEELVKDGDEMEWKETARWIKFEEDVEEGGN 146

Query: 68  RWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKL 114
           RWSKPHVATLSLHSLFELRSLLLNG VMLD+EA SLEQI DL ++ +
Sbjct: 147 RWSKPHVATLSLHSLFELRSLLLNGTVMLDMEATSLEQIADLVLDNM 193

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020115|gb|EGI60561.1| Sodium-driven chloride bicarbonate exchanger [Acromyrmex echinatior]

 Score =  188 bits (478), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 87/107 (81%), Positives = 99/107 (92%)

Query: 8   VTPPSQRVQFILGEDVDDASHHAHPLFSEMEELVRNGEEMEWKETARWIKFEEDVEEGGN 67
           +TPP+QRVQFILGE+V D +H +HPLFSEMEELV++G+EMEWKETARWIKFEEDVEEGGN
Sbjct: 88  ITPPAQRVQFILGEEVGDDAHESHPLFSEMEELVKDGDEMEWKETARWIKFEEDVEEGGN 147

Query: 68  RWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKL 114
           RWSKPHVATLSLHSLFELRSLLLNG VMLD+EA SLEQI DL ++ +
Sbjct: 148 RWSKPHVATLSLHSLFELRSLLLNGTVMLDMEAGSLEQIADLVLDNM 194

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307213445|gb|EFN88867.1| Sodium-driven chloride bicarbonate exchanger [Harpegnathos saltator]

 Score =  187 bits (476), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 87/108 (80%), Positives = 100/108 (92%)

Query: 7   SVTPPSQRVQFILGEDVDDASHHAHPLFSEMEELVRNGEEMEWKETARWIKFEEDVEEGG 66
           S+TPP+QRVQFILGE+V D +H +HPLFSEMEELV++G+EMEWKETARWIKFEEDVEEGG
Sbjct: 84  SITPPAQRVQFILGEEVGDDAHESHPLFSEMEELVKDGDEMEWKETARWIKFEEDVEEGG 143

Query: 67  NRWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKL 114
           NRWSKPHVATLSLHSLFELRSL+LNG VMLD+EA SLEQI DL ++ +
Sbjct: 144 NRWSKPHVATLSLHSLFELRSLILNGTVMLDMEAVSLEQIADLVLDNM 191

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	139
FB|FBgn0259111	1190	Ndae1 "Na[+]-driven anion exch	0.820	0.095	0.622	1.3e-33
UNIPROTKB|F1MCB5	429	SLC4A7 "Uncharacterized protei	0.791	0.256	0.553	1.5e-28
UNIPROTKB|B6DY53	463	SLC4A7 "Sodium bicarbonate cot	0.791	0.237	0.553	1.5e-28
UNIPROTKB|B6DY52	574	SLC4A7 "Solute carrier family	0.791	0.191	0.553	6.3e-28
UNIPROTKB|F1M3E7	919	Slc4a7 "Sodium bicarbonate cot	0.848	0.128	0.525	1e-27
MGI|MGI:2443878	1034	Slc4a7 "solute carrier family	0.848	0.114	0.525	1.3e-27
UNIPROTKB|B7Z2J0	408	SLC4A10 "cDNA FLJ53785, highly	0.784	0.267	0.531	1.3e-27
UNIPROTKB|F1M0J3	1115	Slc4a7 "Sodium bicarbonate cot	0.848	0.105	0.525	1.4e-27
UNIPROTKB|F1LSK4	1202	Slc4a7 "Sodium bicarbonate cot	0.848	0.098	0.525	1.6e-27
RGD|621208	1218	Slc4a7 "solute carrier family	0.848	0.096	0.525	1.7e-27

FB|FBgn0259111 Ndae1 "Na[+]-driven anion exchanger 1" [Drosophila melanogaster (taxid:7227)]

 Score = 378 (138.1 bits), Expect = 1.3e-33, P = 1.3e-33
 Identities = 71/114 (62%), Positives = 85/114 (74%)

Query:     8 VTPPSQRVQFILGEDVDDASHHAHPLFSEMEELVRNGEEMEWKETARWIKFEEDVEEGGN 67
             VTPP+QRVQFILGEDVDD +H +HPLFSEM  LV+ G+E+EWKETARWIKFEEDVEEGGN
Sbjct:   114 VTPPAQRVQFILGEDVDDGTHVSHPLFSEMGMLVKEGDEIEWKETARWIKFEEDVEEGGN 173

Query:    68 RWSKPHVATXXXXXXXXXXXXXXNGCVMLDLEANSLEQIVDLFIEKLRTTESIP 121
             RWSKPHVAT              NG VMLD+EA +LE + DL  + + +  ++P
Sbjct:   174 RWSKPHVATLSLHSLFELRRLLVNGSVMLDMEAQNLEVMADLVCDHMVSAGTLP 227

GO:0015106 "bicarbonate transmembrane transporter activity" evidence=ISS

GO:0006820 "anion transport" evidence=IDA

GO:0015992 "proton transport" evidence=IDA

GO:0015301 "anion:anion antiporter activity" evidence=NAS;IDA

GO:0015701 "bicarbonate transport" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0006814 "sodium ion transport" evidence=IDA

GO:0006821 "chloride transport" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA;NAS

GO:0008510 "sodium:bicarbonate symporter activity" evidence=NAS

GO:0005452 "inorganic anion exchanger activity" evidence=IEA

UNIPROTKB|F1MCB5 SLC4A7 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 62/112 (55%), Positives = 79/112 (70%)

Query:     4 SPLSVTPPSQRVQFILGEDVDDASHHAHPLFSEMEELV-RNGEEMEWKETARWIKFEEDV 62
             SP S   PSQRVQFILG + DD  H  H LF+EM+EL  R+GEE EWKETARW+KFEEDV
Sbjct:    80 SP-SYDTPSQRVQFILGTEDDDEEHIPHDLFTEMDELCYRDGEEYEWKETARWLKFEEDV 138

Query:    63 EEGGNRWSKPHVATXXXXXXXXXXXXXXNGCVMLDLEANSLEQIVDLFIEKL 114
             E+GG+RWSKP+VAT              NG VMLD+ A++L++I D+ ++ +
Sbjct:   139 EDGGDRWSKPYVATLSLHSLFELRSCILNGTVMLDMRASTLDEIADMVLDNM 190

GO:0016021 "integral to membrane" evidence=IEA

GO:0005452 "inorganic anion exchanger activity" evidence=IEA

UNIPROTKB|B6DY53 SLC4A7 "Sodium bicarbonate cotransporter 3" [Homo sapiens (taxid:9606)]

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 62/112 (55%), Positives = 79/112 (70%)

Query:     4 SPLSVTPPSQRVQFILGEDVDDASHHAHPLFSEMEELV-RNGEEMEWKETARWIKFEEDV 62
             SP S   PSQRVQFILG + DD  H  H LF+EM+EL  R+GEE EWKETARW+KFEEDV
Sbjct:    89 SP-SYDTPSQRVQFILGTEDDDEEHIPHDLFTEMDELCYRDGEEYEWKETARWLKFEEDV 147

Query:    63 EEGGNRWSKPHVATXXXXXXXXXXXXXXNGCVMLDLEANSLEQIVDLFIEKL 114
             E+GG+RWSKP+VAT              NG VMLD+ A++L++I D+ ++ +
Sbjct:   148 EDGGDRWSKPYVATLSLHSLFELRSCILNGTVMLDMRASTLDEIADMVLDNM 199

GO:0005452 "inorganic anion exchanger activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|B6DY52 SLC4A7 "Solute carrier family 4 sodium bicarbonate cotransporter member 7 truncated type 4 variant" [Homo sapiens (taxid:9606)]

 Score = 318 (117.0 bits), Expect = 6.3e-28, P = 6.3e-28
 Identities = 62/112 (55%), Positives = 79/112 (70%)

Query:     4 SPLSVTPPSQRVQFILGEDVDDASHHAHPLFSEMEELV-RNGEEMEWKETARWIKFEEDV 62
             SP S   PSQRVQFILG + DD  H  H LF+EM+EL  R+GEE EWKETARW+KFEEDV
Sbjct:    89 SP-SYDTPSQRVQFILGTEDDDEEHIPHDLFTEMDELCYRDGEEYEWKETARWLKFEEDV 147

Query:    63 EEGGNRWSKPHVATXXXXXXXXXXXXXXNGCVMLDLEANSLEQIVDLFIEKL 114
             E+GG+RWSKP+VAT              NG VMLD+ A++L++I D+ ++ +
Sbjct:   148 EDGGDRWSKPYVATLSLHSLFELRSCILNGTVMLDMRASTLDEIADMVLDNM 199

GO:0005452 "inorganic anion exchanger activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1M3E7 Slc4a7 "Sodium bicarbonate cotransporter 3" [Rattus norvegicus (taxid:10116)]

 Score = 321 (118.1 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 63/120 (52%), Positives = 82/120 (68%)

Query:     4 SPLSVTPPSQRVQFILGEDVDDASHHAHPLFSEMEELV-RNGEEMEWKETARWIKFEEDV 62
             SP S   PSQRVQFILG + DD  H  H LF+EM+EL  R+GEE EWKETARW+KFEEDV
Sbjct:    73 SP-SYDTPSQRVQFILGTEDDDEEHIPHDLFTEMDELCYRDGEEYEWKETARWLKFEEDV 131

Query:    63 EEGGNRWSKPHVATXXXXXXXXXXXXXXNGCVMLDLEANSLEQIVDLFIEKLRTTESIPD 122
             E+GG+RWSKP+VAT              NG VMLD+ A++L++I D+ ++ +  +  + D
Sbjct:   132 EDGGDRWSKPYVATLSLHSLFELRSCILNGTVMLDMRASTLDEIADMVLDNMIASGQLDD 191

GO:0005452 "inorganic anion exchanger activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:2443878 Slc4a7 "solute carrier family 4, sodium bicarbonate cotransporter, member 7" [Mus musculus (taxid:10090)]

 Score = 321 (118.1 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 63/120 (52%), Positives = 82/120 (68%)

Query:     4 SPLSVTPPSQRVQFILGEDVDDASHHAHPLFSEMEELV-RNGEEMEWKETARWIKFEEDV 62
             SP S   PSQRVQFILG + DD  H  H LF+EM+EL  R+GEE EWKETARW+KFEEDV
Sbjct:    89 SP-SYDTPSQRVQFILGTEDDDEEHIPHDLFTEMDELCYRDGEEYEWKETARWLKFEEDV 147

Query:    63 EEGGNRWSKPHVATXXXXXXXXXXXXXXNGCVMLDLEANSLEQIVDLFIEKLRTTESIPD 122
             E+GG+RWSKP+VAT              NG VMLD+ A++L++I D+ ++ +  +  + D
Sbjct:   148 EDGGDRWSKPYVATLSLHSLFELRSCILNGTVMLDMRASTLDEIADMVLDNMIASGQLDD 207

GO:0005215 "transporter activity" evidence=IEA

GO:0005452 "inorganic anion exchanger activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006820 "anion transport" evidence=IEA

GO:0007601 "visual perception" evidence=IMP

GO:0008509 "anion transmembrane transporter activity" evidence=IEA

GO:0015293 "symporter activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=ISO;IDA

GO:0016324 "apical plasma membrane" evidence=ISO;IDA

GO:0021747 "cochlear nucleus development" evidence=IMP

GO:0031410 "cytoplasmic vesicle" evidence=ISO

GO:0042995 "cell projection" evidence=IEA

GO:0046666 "retinal cell programmed cell death" evidence=IMP

GO:0060117 "auditory receptor cell development" evidence=IMP

GO:0060219 "camera-type eye photoreceptor cell differentiation" evidence=IMP

GO:0061299 "retina vasculature morphogenesis in camera-type eye" evidence=IMP

UNIPROTKB|B7Z2J0 SLC4A10 "cDNA FLJ53785, highly similar to Sodium-driven chloride bicarbonate exchanger" [Homo sapiens (taxid:9606)]

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 59/111 (53%), Positives = 77/111 (69%)

Query:     4 SPLSVTPPSQRVQFILGEDVDDASHHAHPLFSEMEELV-RNGEEMEWKETARWIKFEEDV 62
             SP S   PSQRVQFILG + DD  H  H LF+E++E+  R GE+ EW+ETARW+KFEEDV
Sbjct:    89 SP-SFDTPSQRVQFILGTEDDDEEHIPHDLFTELDEICWREGEDAEWRETARWLKFEEDV 147

Query:    63 EEGGNRWSKPHVATXXXXXXXXXXXXXXNGCVMLDLEANSLEQIVDLFIEK 113
             E+GG RWSKP+VAT              NG V+LD+ AN+LE+I D+ +++
Sbjct:   148 EDGGERWSKPYVATLSLHSLFELRSCILNGTVLLDMHANTLEEIADMVLDQ 198

GO:0005452 "inorganic anion exchanger activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1M0J3 Slc4a7 "Sodium bicarbonate cotransporter 3" [Rattus norvegicus (taxid:10116)]

 Score = 321 (118.1 bits), Expect = 1.4e-27, P = 1.4e-27
 Identities = 63/120 (52%), Positives = 82/120 (68%)

Query:     4 SPLSVTPPSQRVQFILGEDVDDASHHAHPLFSEMEELV-RNGEEMEWKETARWIKFEEDV 62
             SP S   PSQRVQFILG + DD  H  H LF+EM+EL  R+GEE EWKETARW+KFEEDV
Sbjct:    73 SP-SYDTPSQRVQFILGTEDDDEEHIPHDLFTEMDELCYRDGEEYEWKETARWLKFEEDV 131

Query:    63 EEGGNRWSKPHVATXXXXXXXXXXXXXXNGCVMLDLEANSLEQIVDLFIEKLRTTESIPD 122
             E+GG+RWSKP+VAT              NG VMLD+ A++L++I D+ ++ +  +  + D
Sbjct:   132 EDGGDRWSKPYVATLSLHSLFELRSCILNGTVMLDMRASTLDEIADMVLDNMIASGQLDD 191

GO:0005452 "inorganic anion exchanger activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1LSK4 Slc4a7 "Sodium bicarbonate cotransporter 3" [Rattus norvegicus (taxid:10116)]

 Score = 321 (118.1 bits), Expect = 1.6e-27, P = 1.6e-27
 Identities = 63/120 (52%), Positives = 82/120 (68%)

Query:     4 SPLSVTPPSQRVQFILGEDVDDASHHAHPLFSEMEELV-RNGEEMEWKETARWIKFEEDV 62
             SP S   PSQRVQFILG + DD  H  H LF+EM+EL  R+GEE EWKETARW+KFEEDV
Sbjct:    73 SP-SYDTPSQRVQFILGTEDDDEEHIPHDLFTEMDELCYRDGEEYEWKETARWLKFEEDV 131

Query:    63 EEGGNRWSKPHVATXXXXXXXXXXXXXXNGCVMLDLEANSLEQIVDLFIEKLRTTESIPD 122
             E+GG+RWSKP+VAT              NG VMLD+ A++L++I D+ ++ +  +  + D
Sbjct:   132 EDGGDRWSKPYVATLSLHSLFELRSCILNGTVMLDMRASTLDEIADMVLDNMIASGQLDD 191

GO:0005452 "inorganic anion exchanger activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|621208 Slc4a7 "solute carrier family 4, sodium bicarbonate cotransporter, member 7" [Rattus norvegicus (taxid:10116)]

 Score = 321 (118.1 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 63/120 (52%), Positives = 82/120 (68%)

Query:     4 SPLSVTPPSQRVQFILGEDVDDASHHAHPLFSEMEELV-RNGEEMEWKETARWIKFEEDV 62
             SP S   PSQRVQFILG + DD  H  H LF+EM+EL  R+GEE EWKETARW+KFEEDV
Sbjct:    89 SP-SYDTPSQRVQFILGTEDDDEEHIPHDLFTEMDELCYRDGEEYEWKETARWLKFEEDV 147

Query:    63 EEGGNRWSKPHVATXXXXXXXXXXXXXXNGCVMLDLEANSLEQIVDLFIEKLRTTESIPD 122
             E+GG+RWSKP+VAT              NG VMLD+ A++L++I D+ ++ +  +  + D
Sbjct:   148 EDGGDRWSKPYVATLSLHSLFELRSCILNGTVMLDMRASTLDEIADMVLDNMIASGQLDD 207

GO:0005452 "inorganic anion exchanger activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO

GO:0006814 "sodium ion transport" evidence=IEA

GO:0007601 "visual perception" evidence=ISO

GO:0015293 "symporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=ISO;IDA

GO:0016324 "apical plasma membrane" evidence=ISO;IDA

GO:0021747 "cochlear nucleus development" evidence=ISO

GO:0031410 "cytoplasmic vesicle" evidence=IDA

GO:0032420 "stereocilium" evidence=IEA

GO:0046666 "retinal cell programmed cell death" evidence=ISO

GO:0060117 "auditory receptor cell development" evidence=ISO

GO:0060219 "camera-type eye photoreceptor cell differentiation" evidence=ISO

GO:0061299 "retina vasculature morphogenesis in camera-type eye" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9Y6M7	S4A7_HUMAN	No assigned EC number	0.6761	0.7482	0.0856	yes	N/A
Q9R1N3	S4A7_RAT	No assigned EC number	0.6371	0.8057	0.0919	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	139
TIGR00834	900	TIGR00834, ae, anion exchange protein	6e-35
pfam07565	250	pfam07565, Band_3_cyto, Band 3 cytoplasmic domain	3e-24

>gnl|CDD|233143 TIGR00834, ae, anion exchange protein

 Score =  127 bits (320), Expect = 6e-35
 Identities = 48/89 (53%), Positives = 61/89 (68%), Gaps = 1/89 (1%)

Query: 34  FSEMEELVRN-GEEMEWKETARWIKFEEDVEEGGNRWSKPHVATLSLHSLFELRSLLLNG 92
           F E+ EL+ +  +E EW+ETARWIKFEEDVEEGG RW KPHVATLS HSL ELR     G
Sbjct: 1   FVELNELMLDRNQEPEWRETARWIKFEEDVEEGGGRWGKPHVATLSFHSLLELRRCFAKG 60

Query: 93  CVMLDLEANSLEQIVDLFIEKLRTTESIP 121
            ++LDL A SL  + ++ ++ L  +  I 
Sbjct: 61  AILLDLAATSLPGVANMVVDHLIYSGQIR 89

The Anion Exchanger (AE) Family (TC 2.A.31)Characterized protein members of the AE family are found only in animals.They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule [Transport and binding proteins, Anions]. Length = 900

>gnl|CDD|219468 pfam07565, Band_3_cyto, Band 3 cytoplasmic domain

 Score = 93.1 bits (232), Expect = 3e-24
 Identities = 34/61 (55%), Positives = 44/61 (72%)

Query: 61  DVEEGGNRWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKLRTTESI 120
           DVEEGG RW KPHVATLS HSL ELR  L NG V+LDL+A SL  + D  ++++ +++ I
Sbjct: 1   DVEEGGGRWGKPHVATLSFHSLLELRRCLSNGTVLLDLDATSLPGVADKVVDQMISSDQI 60

Query: 121 P 121
            
Sbjct: 61  R 61

This family contains the cytoplasmic domain of the Band 3 anion exchange proteins that exchange Cl-/HCO3-. Band 3 constitutes the most abundant polypeptide in the red blood cell membrane, comprising 25% of the total membrane protein. The cytoplasmic domain of band 3 functions primarily as an anchoring site for other membrane-associated proteins. Included among the protein ligands of cdb3 are ankyrin, protein 4.2, protein 4.1, glyceraldehyde-3-phosphate dehydrogenase (GAPDH), phosphofructokinase, aldolase, hemoglobin, hemichromes, and the protein tyrosine kinase (p72syk). Length = 250

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	139
TIGR00834	900	ae anion exchange protein. They preferentially cat	100.0
KOG1172|consensus	876		100.0
PF07565	257	Band_3_cyto: Band 3 cytoplasmic domain; InterPro:	99.94
PF02268	49	TFIIA_gamma_N: Transcription initiation factor IIA	80.42

>TIGR00834 ae anion exchange protein

Probab=100.00  E-value=2.4e-41  Score=316.62  Aligned_cols=93  Identities=52%  Similarity=0.922  Sum_probs=90.6

Q ss_pred             hhhhHHhh-ccCcchhHHHHhhhhhhhhhcccCCCccCCCcccccchhHHHHHHHHHHhcccccccccccHHHHHHHHHH
Q psy13191         34 FSEMEELV-RNGEEMEWKETARWIKFEEDVEEGGNRWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIE  112 (139)
Q Consensus        34 FvEl~EL~-~~~~~~eWkEtARWIkfEE~ve~~~~rWskPHVs~LSfhSL~eLR~~l~~G~vLLDlea~sL~~Iad~Vvd  112 (139)
                      ||||+||+ .+|++++|||||||||||||||++++|||||||||||||||||||+||.+|+||||++++||++||++|+|
T Consensus         1 f~el~el~~~~~~e~~W~etarWikfEe~ve~~~~rw~kphva~ls~~sl~elr~~~~~g~vlld~~~~~l~~i~~~v~d   80 (900)
T TIGR00834         1 FVELNELMLDRNQEPEWRETARWIKFEEDVEEGGGRWGKPHVATLSFHSLLELRRCFAKGAILLDLAATSLPGVANMVVD   80 (900)
T ss_pred             CccHHHhhcCCCchhhhHHHhhHhhhhhccccccCccCCCccccccHHHHHHHHHHHhcCeEEeccccccHHHHHHHHHH
Confidence            89999999 57899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCccccc
Q psy13191        113 KLRTTESIPDHESS  126 (139)
Q Consensus       113 ~~i~~~~i~~~~~~  126 (139)
                      +|+++|||++++|-
T Consensus        81 ~~~~~~~l~~~~r~   94 (900)
T TIGR00834        81 HLIYSGQIRPEDRD   94 (900)
T ss_pred             hhhhhcCCCHHHHH
Confidence            99999999999884

They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.

>KOG1172|consensus

Probab=100.00  E-value=9e-34  Score=264.12  Aligned_cols=96  Identities=61%  Similarity=1.007  Sum_probs=91.9

Q ss_pred             CchhhhhHHhhccCcchhHHHHhhhhhhhhhcccCCCccCCCcccccchhHHHHHHHHHHhcccccccccccHHHHHHHH
Q psy13191         31 HPLFSEMEELVRNGEEMEWKETARWIKFEEDVEEGGNRWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLF  110 (139)
Q Consensus        31 h~lFvEl~EL~~~~~~~eWkEtARWIkfEE~ve~~~~rWskPHVs~LSfhSL~eLR~~l~~G~vLLDlea~sL~~Iad~V  110 (139)
                      |++|+||+| +.+ ++.+|||||||||||||||++++||||||||+||||||++||+|+.+|+++||++++||++||++|
T Consensus         1 ~~~f~e~~e-~~~-~~~~wketaRw~kfEEdve~~~~rw~kphva~ls~~sl~~lr~~l~~g~vlld~~~~~l~~~~~~v   78 (876)
T KOG1172|consen    1 HELFTELDE-LQD-DEPEWKETARWIKFEEDVEEGGERWSKPHVATLSLHSLFELRSCLANGTVLLDLDATSLPEIADQV   78 (876)
T ss_pred             CCcchhhhc-ccc-CCccHHHhhhhhhhHhhhhhccccccCCcccccchHhHHHHHHHHhcCceeccccccccHHHHHHH
Confidence            789999999 755 899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCccccchh
Q psy13191        111 IEKLRTTESIPDHESSMG  128 (139)
Q Consensus       111 vd~~i~~~~i~~~~~~~~  128 (139)
                      +++|+.+|++++++|.=.
T Consensus        79 ~~~~v~~~~~~~~~r~~~   96 (876)
T KOG1172|consen   79 VEKMVESGQLKPEDRENV   96 (876)
T ss_pred             hhhcccCCCCChhhHHHH
Confidence            999999999999988643

>PF07565 Band_3_cyto: Band 3 cytoplasmic domain; InterPro: IPR013769 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells

Probab=99.94  E-value=2.7e-28  Score=201.96  Aligned_cols=66  Identities=56%  Similarity=0.908  Sum_probs=48.7

Q ss_pred             hcccCCCccCCCcccccchhHHHHHHHHHHhcccccccccccHHHHHHHHHHHHHhcCCCCccccc
Q psy13191         61 DVEEGGNRWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKLRTTESIPDHESS  126 (139)
Q Consensus        61 ~ve~~~~rWskPHVs~LSfhSL~eLR~~l~~G~vLLDlea~sL~~Iad~Vvd~~i~~~~i~~~~~~  126 (139)
                      |||++++|||||||||||||||||||+||.+|+|||||+++||++||++|||+|+++++|+++++.
T Consensus         1 dVEeg~~RWsKPHVatLSfhSL~ELR~~l~~G~vLLDlea~tl~~I~~~vvd~~v~~~~l~~~~r~   66 (257)
T PF07565_consen    1 DVEEGGERWSKPHVATLSFHSLFELRSCLENGTVLLDLEAKTLPEIADKVVDQMVSEGQLRPEDRD   66 (257)
T ss_dssp             ----TTS-B---B---BEHHHHHHHHHHHHT-EEEEEE---SHHHHHHHHHHHHHHTTSS-GGGHH
T ss_pred             CCcccCCccCCCcccccCHHHHHHHHHHHHhCCeeecccccCHHHHHHHHHHHHHhhcCCCHHHHH
Confidence            689999999999999999999999999999999999999999999999999999999999998864

Such transport also plays a vital role in acid-base movements in the stomach, pancreas, intestine, kidney, reproductive organs and the central nervous system. Functional studies have suggested four different HCO3 - transport modes. Anion exchanger proteins exchange HCO3 - for Cl- in a reversible, electroneutral manner []. Na+/HCO3 - co-transport proteins mediate the coupled movement of Na+ and HCO3 - across plasma membranes, often in an electrogenic manner []. Na- driven Cl-/HCO3 - exchange and K+/HCO3 - exchange activities have also been detected in certain cell types, although the molecular identities of the proteins responsible remain to be determined. Sequence analysis of the two families of HCO3 - transporters that have been cloned to date (the anion exchangers and Na+/HCO3 - co-transporters) reveals that they are homologous. This is not entirely unexpected, given that they both transport HCO3 - and are inhibited by a class of pharmacological agents called disulphonic stilbenes []. They share around ~25-30% sequence identity, which is distributed along their entire sequence length, and have similar predicted membrane topologies, suggesting they have ~10 transmembrane (TM) domains.; GO: 0008509 anion transmembrane transporter activity, 0006820 anion transport, 0016021 integral to membrane; PDB: 1HYN_Q.

>PF02268 TFIIA_gamma_N: Transcription initiation factor IIA, gamma subunit, helical domain; InterPro: IPR015872 Transcription factor IIA (TFIIA) is one of several factors that form part of a transcription pre-initiation complex along with RNA polymerase II, the TATA-box-binding protein (TBP) and TBP-associated factors, on the TATA-box sequence upstream of the initiation start site

Probab=80.42  E-value=1.5  Score=28.79  Aligned_cols=39  Identities=15%  Similarity=0.136  Sum_probs=27.2

Q ss_pred             cccHHHHHHHHHHHHHhcCCCCccccchhhhHhhhhhcc
Q psy13191        100 ANSLEQIVDLFIEKLRTTESIPDHESSMGIWSMKKSMNN  138 (139)
Q Consensus       100 a~sL~~Iad~Vvd~~i~~~~i~~~~~~~~~~~~~~~~~~  138 (139)
                      .+|+..-....+|+||.+|.|.|+.-.--.-.+-|+||+
T Consensus         8 ~stlG~aL~dtLDeli~~~~I~p~La~kVL~~FDksi~~   46 (49)
T PF02268_consen    8 RSTLGIALTDTLDELIQEGKITPQLAMKVLEQFDKSINE   46 (49)
T ss_dssp             CSHHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence            466777778899999999999998754333344566553

After initiation, some components of the pre-initiation complex (including TFIIA) remain attached and re-initiate a subsequent round of transcription. TFIIA binds to TBP to stabilise TBP binding to the TATA element. TFIIA also inhibits the cytokine HMGB1 (high mobility group 1 protein) binding to TBP [], and can dissociate HMGB1 already bound to TBP/TATA-box. Human and Drosophila TFIIA have three subunits: two large subunits, LN/alpha and LC/beta, derived from the same gene, and a small subunit, S/gamma. Yeast TFIIA has two subunits: a large TOA1 subunit that shows sequence similarity to the N-terminal of LN/alpha and the C-terminal of LC/beta, and a small subunit, TOA2 that is highly homologous with S/gamma. The conserved regions of the large and small subunits of TFIIA combine to form two domains: a four-helix bundle (helical domain) composed of two helices from each of the N-terminal regions of TOA1 and TOA2 in yeast; and a beta-barrel (beta-barrel domain) composed of beta-sheets from the C-terminal regions of TOA1 and TOA2 []. This entry represents the alpha-helical domain found at the N-terminal of the gamma subunit of transcription factor TFIIA.; GO: 0006367 transcription initiation from RNA polymerase II promoter, 0005672 transcription factor TFIIA complex; PDB: 1NVP_D 1RM1_B 1YTF_D 1NH2_D.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	139
1hyn_P	379	Crystal Structure Of The Cytoplasmic Domain Of Huma		1e-07

>pdb|1HYN|P Chain P, Crystal Structure Of The Cytoplasmic Domain Of Human Erythrocyte Band-3 Protein Length = 379

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 22  DVDDASHHA-HPLFSEMEELVRN--GEEMEWKETARWIKFEEDVEEGGNRWSKPHVATXX 78
           D    SH   H ++ E++ELV +   +E+ W E ARW++ EE++ E G  W +PH++   
Sbjct: 45  DYHTTSHPGTHKVYVELQELVMDEKNQELRWMEAARWVQLEENLGENGA-WGRPHLSHLT 103
Query: 79  XXXXXXXXXXXXNGCVMLDLEANSLE----QIVDLFI 111
                        G V+LDL+  SL     Q++D FI
Sbjct: 104 FWSLLELRRVFTKGTVLLDLQETSLAGVANQLLDRFI 140

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	139
1hyn_P	379	BAND 3 anion transport protein; membrane protein;	1e-38

>1hyn_P BAND 3 anion transport protein; membrane protein; 2.60A {Homo sapiens} SCOP: d.112.1.2 Length = 379

 Score =  132 bits (334), Expect = 1e-38
 Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 4/115 (3%)

Query: 11  PSQRVQFILGEDVDDASHHA-HPLFSEMEELVR--NGEEMEWKETARWIKFEEDVEEGGN 67
           P+         D    SH   H ++ E++ELV     +E+ W E ARW++ EE++ E G 
Sbjct: 34  PAAHDTEATATDYHTTSHPGTHKVYVELQELVMDEKNQELRWMEAARWVQLEENLGENG- 92

Query: 68  RWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDLFIEKLRTTESIPD 122
            W +PH++ L+  SL ELR +   G V+LDL+  SL  + +  +++    + I  
Sbjct: 93  AWGRPHLSHLTFWSLLELRRVFTKGTVLLDLQETSLAGVANQLLDRFIFEDQIRP 147

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	139
1hyn_P	379	BAND 3 anion transport protein; membrane protein;	100.0

>1hyn_P BAND 3 anion transport protein; membrane protein; 2.60A {Homo sapiens} SCOP: d.112.1.2

Probab=100.00  E-value=1.9e-39  Score=278.97  Aligned_cols=99  Identities=31%  Similarity=0.724  Sum_probs=89.2

Q ss_pred             CCCCCCchhhhhHHhh--ccCcchhHHHHhhhhhhhhhcccCCCccCCCcccccchhHHHHHHHHHHhcccccccccccH
Q psy13191         26 ASHHAHPLFSEMEELV--RNGEEMEWKETARWIKFEEDVEEGGNRWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSL  103 (139)
Q Consensus        26 ~~~~~h~lFvEl~EL~--~~~~~~eWkEtARWIkfEE~ve~~~~rWskPHVs~LSfhSL~eLR~~l~~G~vLLDlea~sL  103 (139)
                      .+|.+|++||||+||+  .+|++++|||||||||||||||++ +|||||||||||||||++||+||.+|+|+||++++|+
T Consensus        50 ~~~~~~~~f~el~eL~~~~~~~~~~W~EtaRWikfEE~ve~~-~rW~kphv~~Ls~~SLmeLr~~L~~g~IlLDl~a~sk  128 (379)
T 1hyn_P           50 SHPGTHKVYVELQELVMDEKNQELRWMEAARWVQLEENLGEN-GAWGRPHLSHLTFWSLLELRRVFTKGTVLLDLQETSL  128 (379)
T ss_dssp             ------CCEEEEEEEEEETTTCCEEEEEEEEEESSEEEBCTT-SCBCCCBCCCBCHHHHHHHHHHHHTCEEEEEECCCSH
T ss_pred             CCCCCCceeeeHhhhccCCCCCcceeHhhhhhhhheeccccC-CccCCCcccccCHHHHHHHHHhcCcceEEeCCCCCCH
Confidence            3678999999999996  578999999999999999999998 9999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCcccc
Q psy13191        104 EQIVDLFIEKLRTTESIPDHES  125 (139)
Q Consensus       104 ~~Iad~Vvd~~i~~~~i~~~~~  125 (139)
                      ++|++.|++.|+.+|+|+++++
T Consensus       129 ~eii~~l~~~l~~~g~v~~~d~  150 (379)
T 1hyn_P          129 AGVANQLLDRFIFEDQIRPQDR  150 (379)
T ss_dssp             HHHHHHHHHHHHHTTSSCGGGH
T ss_pred             HHHHHHHHHHHHHcCCCchhhH
Confidence            9999999999999999986544

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	139
d1hynp_	293	d.112.1.2 (P:) Erythrocite membrane Band 3 {Human	1e-41

>d1hynp_ d.112.1.2 (P:) Erythrocite membrane Band 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Phoshotransferase/anion transport protein
superfamily: Phoshotransferase/anion transport protein
family: Anion transport protein, cytoplasmic domain
domain: Erythrocite membrane Band 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (347), Expect = 1e-41
 Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 3/94 (3%)

Query: 33  LFSEMEELVR--NGEEMEWKETARWIKFEEDVEEGGNRWSKPHVATLSLHSLFELRSLLL 90
           ++ E++ELV     +E+ W E ARW++ EE++ E G  W +PH++ L+  SL ELR +  
Sbjct: 2   VYVELQELVMDEKNQELRWMEAARWVQLEENLGENG-AWGRPHLSHLTFWSLLELRRVFT 60

Query: 91  NGCVMLDLEANSLEQIVDLFIEKLRTTESIPDHE 124
            G V+LDL+  SL  + +  +++    + I   +
Sbjct: 61  KGTVLLDLQETSLAGVANQLLDRFIFEDQIRPQD 94

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	139
d1hynp_	293	Erythrocite membrane Band 3 {Human (Homo sapiens)	100.0

>d1hynp_ d.112.1.2 (P:) Erythrocite membrane Band 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Phoshotransferase/anion transport protein
superfamily: Phoshotransferase/anion transport protein
family: Anion transport protein, cytoplasmic domain
domain: Erythrocite membrane Band 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-44  Score=301.26  Aligned_cols=94  Identities=32%  Similarity=0.738  Sum_probs=89.2

Q ss_pred             chhhhhHHhhc--cCcchhHHHHhhhhhhhhhcccCCCccCCCcccccchhHHHHHHHHHHhcccccccccccHHHHHHH
Q psy13191         32 PLFSEMEELVR--NGEEMEWKETARWIKFEEDVEEGGNRWSKPHVATLSLHSLFELRSLLLNGCVMLDLEANSLEQIVDL  109 (139)
Q Consensus        32 ~lFvEl~EL~~--~~~~~eWkEtARWIkfEE~ve~~~~rWskPHVs~LSfhSL~eLR~~l~~G~vLLDlea~sL~~Iad~  109 (139)
                      ++||||+||+.  +|++++|||||||||||||||++ +|||||||||||||||||||+||.+|+||||++++||++||+.
T Consensus         1 e~f~el~EL~~~~~~~e~eWkEtARWikfEEdvee~-~rW~kPHVa~Ls~hSL~eLR~~L~~GtVLLDl~a~sL~~Iad~   79 (293)
T d1hynp_           1 KVYVELQELVMDEKNQELRWMEAARWVQLEENLGEN-GAWGRPHLSHLTFWSLLELRRVFTKGTVLLDLQETSLAGVANQ   79 (293)
T ss_dssp             CCEEEEEEEEEETTTCCEEEEEEEEEESSEEEBCTT-SCBCCCBCCCBCHHHHHHHHHHHHTCEEEEEECCCSHHHHHHH
T ss_pred             CccchHHHHhccCCCCcchhhhhhhhhhhhcccccC-CccCCCccccccHHHHHHHHHHHhcCeEEecCCCCCHHHHHHH
Confidence            58999999994  37899999999999999999975 7999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCccccc
Q psy13191        110 FIEKLRTTESIPDHESS  126 (139)
Q Consensus       110 Vvd~~i~~~~i~~~~~~  126 (139)
                      |+|+|+.+|+|++++|-
T Consensus        80 vvd~mv~~g~l~~~dR~   96 (293)
T d1hynp_          80 LLDRFIFEDQIRPQDRE   96 (293)
T ss_dssp             HHHHHHHTTSSCGGGHH
T ss_pred             HHHHHHhcCCCCHHHHH
Confidence            99999999999998773