Psyllid ID: psy13231


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
MFLVDFHNLQPSEGLQGSTNLNWTSPNDCRRARMEYGFSKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDLITAHSEAEV
ccEEEEccccccccccccccccccccHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccc
cEEEEEEEEEEccccccccccccccccHcHHHHHcccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHcccccHHHccccccccc
mflvdfhnlqpseglqgstnlnwtspndcrrarmeygfskgqtKICKGWTEIMPHVTKAAYLAANTcttlfqdrrwncsslfltpkltpdlitahseaev
MFLVDFhnlqpseglqgstnlnwtspNDCRRARMEYGFSKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLfltpkltpdlitahseaev
MFLVDFHNLQPSEGLQGSTNLNWTSPNDCRRARMEYGFSKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDLITAHSEAEV
**********************W****DCRRARMEYGFSKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDLI********
*FLVDFHNLQP******************RRARMEYGFSKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPD***AHSE***
MFLVDFHNLQPSEGLQGSTNLNWTSPNDCRRARMEYGFSKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDLI********
MFLVDFHNLQPSEGLQGSTNLNWTSPNDCRRARMEYGFSKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDLI********
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooo
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MFLVDFHNLQPSEGLQGSTNLNWTSPNDCRRARMEYGFSKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDLITAHSEAEV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query100 2.2.26 [Sep-21-2011]
O73864 354 Protein Wnt-11 OS=Danio r yes N/A 0.95 0.268 0.288 5e-07
Q28J82 353 Protein Wnt-11b-2 OS=Xeno yes N/A 0.72 0.203 0.388 1e-06
Q66II0 353 Protein Wnt-11b-1 OS=Xeno yes N/A 0.72 0.203 0.388 1e-06
P49893 353 Protein Wnt-11b OS=Xenopu N/A N/A 0.72 0.203 0.361 1e-05
P28466 1004 Protein Wnt-5 OS=Drosophi yes N/A 0.53 0.052 0.392 2e-05
P47793 352 Protein Wnt-4a OS=Danio r no N/A 0.54 0.153 0.403 4e-05
Q670P5 352 Protein Wnt-11 OS=Xenopus N/A N/A 0.55 0.156 0.381 9e-05
B2GUT4 352 Protein Wnt-11 OS=Xenopus no N/A 0.55 0.156 0.381 0.0001
P51891 354 Protein Wnt-11 OS=Coturni N/A N/A 0.55 0.155 0.381 0.0001
P48615 354 Protein Wnt-11 OS=Mus mus yes N/A 0.55 0.155 0.381 0.0001
>sp|O73864|WNT11_DANRE Protein Wnt-11 OS=Danio rerio GN=wnt11 PE=2 SV=1 Back     alignment and function desciption
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 9/104 (8%)

Query: 1   MFLVDFHNLQPSEGLQ------GSTNLNWTSPNDCRRARMEYGFSKGQTKICKGWTEIMP 54
           +F+     + P  G+         +++ W   + C+   +  G    Q ++CK   E+M 
Sbjct: 10  LFITSLSVIYPCTGISWLGLTINGSSVGWNQTHHCK---LLDGLVPDQQQLCKRNLELMH 66

Query: 55  HVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDLITAHSEA 98
            + +AA L  + CT+ F D RWN SS+   P  TPDL     EA
Sbjct: 67  SIVRAARLTKSACTSSFSDMRWNWSSIESAPHFTPDLAKGTREA 110




Ligand for members of the frizzled family of seven transmembrane receptors. May play a role in the formation of dermal structure, both limb and feather buds. Is likely to signal over only few cell diameters.
Danio rerio (taxid: 7955)
>sp|Q28J82|W11B2_XENTR Protein Wnt-11b-2 OS=Xenopus tropicalis GN=wnt11b-2 PE=2 SV=1 Back     alignment and function description
>sp|Q66II0|W11B1_XENTR Protein Wnt-11b-1 OS=Xenopus tropicalis GN=wnt11b-1 PE=2 SV=1 Back     alignment and function description
>sp|P49893|WN11B_XENLA Protein Wnt-11b OS=Xenopus laevis GN=wnt11b PE=1 SV=2 Back     alignment and function description
>sp|P28466|WNT5_DROME Protein Wnt-5 OS=Drosophila melanogaster GN=Wnt5 PE=1 SV=2 Back     alignment and function description
>sp|P47793|WNT4A_DANRE Protein Wnt-4a OS=Danio rerio GN=wnt4a PE=2 SV=1 Back     alignment and function description
>sp|Q670P5|WNT11_XENLA Protein Wnt-11 OS=Xenopus laevis GN=wnt11 PE=2 SV=1 Back     alignment and function description
>sp|B2GUT4|WNT11_XENTR Protein Wnt-11 OS=Xenopus tropicalis GN=wnt11 PE=2 SV=1 Back     alignment and function description
>sp|P51891|WNT11_COTJA Protein Wnt-11 OS=Coturnix coturnix japonica GN=WNT11 PE=2 SV=1 Back     alignment and function description
>sp|P48615|WNT11_MOUSE Protein Wnt-11 OS=Mus musculus GN=Wnt11 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query100
270008220 378 hypothetical protein TcasGA2_TC014270 [T 0.81 0.214 0.505 6e-15
328716060106 PREDICTED: protein Wnt-11b-1-like [Acyrt 0.91 0.858 0.397 9e-14
241999090 358 AmphiWnt4, putative [Ixodes scapularis] 0.8 0.223 0.4 7e-11
91082825 303 PREDICTED: similar to Wnt11 protein [Tri 0.47 0.155 0.659 8e-10
335632008 427 WNT-11 [Trichinella spiralis] 0.81 0.189 0.380 3e-09
339246861 638 protein Wnt-11 [Trichinella spiralis] gi 0.81 0.126 0.380 5e-09
294716485 390 WNT11 [Perionyx excavatus] 0.78 0.2 0.417 7e-09
269785075 358 wingless-type MMTV integration site fami 0.69 0.192 0.436 1e-08
313759708 303 Wnt11_2 [Parasteatoda tepidariorum] 0.75 0.247 0.386 6e-08
443690099 329 hypothetical protein CAPTEDRAFT_20087 [C 0.75 0.227 0.394 1e-07
>gi|270008220|gb|EFA04668.1| hypothetical protein TcasGA2_TC014270 [Tribolium castaneum] Back     alignment and taxonomy information
 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 44/87 (50%), Positives = 53/87 (60%), Gaps = 6/87 (6%)

Query: 11  PSEGLQGSTNLNWTSPNDCRRARMEYGFSKGQTKICKGWTEIMPHVTKAAYLAANTCTTL 70
           P  G++        SP  C  AR  YG +K Q K+C+   E MPHV KAA LAA+TC T+
Sbjct: 43  PGRGIRSGAR----SP--CGVARRRYGLAKLQAKLCRSTMEAMPHVQKAAVLAADTCQTV 96

Query: 71  FQDRRWNCSSLFLTPKLTPDLITAHSE 97
           F+DRRWNCSS+   P LTPDL  A  E
Sbjct: 97  FKDRRWNCSSITTAPYLTPDLTRATRE 123




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328716060|ref|XP_003245823.1| PREDICTED: protein Wnt-11b-1-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|241999090|ref|XP_002434188.1| AmphiWnt4, putative [Ixodes scapularis] gi|215495947|gb|EEC05588.1| AmphiWnt4, putative [Ixodes scapularis] Back     alignment and taxonomy information
>gi|91082825|ref|XP_969261.1| PREDICTED: similar to Wnt11 protein [Tribolium castaneum] Back     alignment and taxonomy information
>gi|335632008|gb|AEH58044.1| WNT-11 [Trichinella spiralis] Back     alignment and taxonomy information
>gi|339246861|ref|XP_003375064.1| protein Wnt-11 [Trichinella spiralis] gi|316971651|gb|EFV55399.1| protein Wnt-11 [Trichinella spiralis] Back     alignment and taxonomy information
>gi|294716485|gb|ADF31344.1| WNT11 [Perionyx excavatus] Back     alignment and taxonomy information
>gi|269785075|ref|NP_001161493.1| wingless-type MMTV integration site family, member 11 precursor [Saccoglossus kowalevskii] gi|268054401|gb|ACY92687.1| Wnt11 [Saccoglossus kowalevskii] Back     alignment and taxonomy information
>gi|313759708|gb|ADR79166.1| Wnt11_2 [Parasteatoda tepidariorum] Back     alignment and taxonomy information
>gi|443690099|gb|ELT92315.1| hypothetical protein CAPTEDRAFT_20087 [Capitella teleta] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query100
ZFIN|ZDB-GENE-990603-12 354 wnt11 "wingless-type MMTV inte 0.97 0.274 0.323 5.1e-08
UNIPROTKB|Q28J82 353 wnt11b-2 "Protein Wnt-11b-2" [ 0.65 0.184 0.415 1.1e-07
UNIPROTKB|Q66II0 353 wnt11b-1 "Protein Wnt-11b-1" [ 0.73 0.206 0.389 1.4e-07
UNIPROTKB|P49893 353 wnt11b "Protein Wnt-11b" [Xeno 0.65 0.184 0.384 1e-06
UNIPROTKB|F1NP78 355 WNT11B "Protein Wnt" [Gallus g 0.8 0.225 0.277 7.8e-06
UNIPROTKB|Q670P5 352 wnt11 "Protein Wnt-11" [Xenopu 0.65 0.184 0.338 1.3e-05
UNIPROTKB|P49339 354 WNT11 "Protein Wnt-11" [Gallus 0.65 0.183 0.338 1.3e-05
UNIPROTKB|P51891 354 WNT11 "Protein Wnt-11" [Coturn 0.65 0.183 0.338 1.3e-05
UNIPROTKB|B2GUT4 352 wnt11 "Protein Wnt-11" [Xenopu 0.65 0.184 0.338 1.6e-05
UNIPROTKB|H0Y663150 WNT4 "Protein Wnt" [Homo sapie 0.49 0.326 0.408 1.9e-05
ZFIN|ZDB-GENE-990603-12 wnt11 "wingless-type MMTV integration site family, member 11" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 131 (51.2 bits), Expect = 5.1e-08, P = 5.1e-08
 Identities = 33/102 (32%), Positives = 49/102 (48%)

Query:     1 MFLVDFHNLQPSEGLQ--GSTNLNWTSP--NDCRRARMEYGFSKGQTKICKGWTEIMPHV 56
             +F+     + P  G+   G T +N +S   N     ++  G    Q ++CK   E+M  +
Sbjct:    10 LFITSLSVIYPCTGISWLGLT-INGSSVGWNQTHHCKLLDGLVPDQQQLCKRNLELMHSI 68

Query:    57 TKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDLITAHSEA 98
              +AA L  + CT+ F D RWN SS+   P  TPDL     EA
Sbjct:    69 VRAARLTKSACTSSFSDMRWNWSSIESAPHFTPDLAKGTREA 110




GO:0016055 "Wnt receptor signaling pathway" evidence=IEA
GO:0007275 "multicellular organismal development" evidence=IEA
GO:0005102 "receptor binding" evidence=IEA
GO:0005576 "extracellular region" evidence=IEA
GO:0060027 "convergent extension involved in gastrulation" evidence=IGI;IMP
GO:0042074 "cell migration involved in gastrulation" evidence=IGI;IMP
GO:0001947 "heart looping" evidence=IGI
GO:0070121 "Kupffer's vesicle development" evidence=IGI
GO:0009952 "anterior/posterior pattern specification" evidence=IBA
GO:0007492 "endoderm development" evidence=IBA
GO:0005615 "extracellular space" evidence=IBA
GO:0009798 "axis specification" evidence=IBA
GO:0001664 "G-protein coupled receptor binding" evidence=IBA
GO:0000132 "establishment of mitotic spindle orientation" evidence=IMP
GO:0005886 "plasma membrane" evidence=IDA;IMP
GO:0030100 "regulation of endocytosis" evidence=IMP
GO:0016337 "cell-cell adhesion" evidence=IGI;IMP
GO:0001702 "gastrulation with mouth forming second" evidence=IMP
GO:0045859 "regulation of protein kinase activity" evidence=IMP
GO:0016477 "cell migration" evidence=IMP
GO:0048048 "embryonic eye morphogenesis" evidence=IGI;IMP
GO:0007417 "central nervous system development" evidence=IMP
GO:0008078 "mesodermal cell migration" evidence=IGI;IMP
GO:0043010 "camera-type eye development" evidence=IMP
GO:0030335 "positive regulation of cell migration" evidence=ISS
GO:0030295 "protein kinase activator activity" evidence=ISS
GO:0005099 "Ras GTPase activator activity" evidence=ISS
GO:0006468 "protein phosphorylation" evidence=ISS
GO:0030336 "negative regulation of cell migration" evidence=ISS
GO:0034394 "protein localization to cell surface" evidence=ISS
GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISS
GO:0060548 "negative regulation of cell death" evidence=ISS
GO:0090037 "positive regulation of protein kinase C signaling cascade" evidence=ISS
GO:0045860 "positive regulation of protein kinase activity" evidence=ISS
GO:0005737 "cytoplasm" evidence=ISS
GO:0010628 "positive regulation of gene expression" evidence=ISS
GO:0044212 "transcription regulatory region DNA binding" evidence=ISS
GO:0032320 "positive regulation of Ras GTPase activity" evidence=ISS
GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS
GO:0043066 "negative regulation of apoptotic process" evidence=ISS
GO:0060021 "palate development" evidence=ISS
GO:0051496 "positive regulation of stress fiber assembly" evidence=ISS
GO:0061101 "neuroendocrine cell differentiation" evidence=ISS
GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IGI;ISS
GO:0030308 "negative regulation of cell growth" evidence=ISS
GO:0060026 "convergent extension" evidence=IGI
GO:0031016 "pancreas development" evidence=IMP
GO:0007507 "heart development" evidence=IGI;IMP
GO:0060031 "mediolateral intercalation" evidence=IMP
GO:0005578 "proteinaceous extracellular matrix" evidence=IEA
GO:0001839 "neural plate morphogenesis" evidence=IMP
GO:0060898 "eye field cell fate commitment involved in camera-type eye formation" evidence=IMP
GO:0035567 "non-canonical Wnt receptor signaling pathway" evidence=IMP
GO:0008104 "protein localization" evidence=IGI
UNIPROTKB|Q28J82 wnt11b-2 "Protein Wnt-11b-2" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms
UNIPROTKB|Q66II0 wnt11b-1 "Protein Wnt-11b-1" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms
UNIPROTKB|P49893 wnt11b "Protein Wnt-11b" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|F1NP78 WNT11B "Protein Wnt" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q670P5 wnt11 "Protein Wnt-11" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|P49339 WNT11 "Protein Wnt-11" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P51891 WNT11 "Protein Wnt-11" [Coturnix japonica (taxid:93934)] Back     alignment and assigned GO terms
UNIPROTKB|B2GUT4 wnt11 "Protein Wnt-11" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms
UNIPROTKB|H0Y663 WNT4 "Protein Wnt" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query100
pfam00110 308 pfam00110, wnt, wnt family 7e-11
smart00097 305 smart00097, WNT1, found in Wnt-1 8e-06
>gnl|CDD|215724 pfam00110, wnt, wnt family Back     alignment and domain information
 Score = 56.5 bits (137), Expect = 7e-11
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)

Query: 29 CRRARMEYGFSKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLT 88
          C +     G S+ Q ++C+   ++M  V + A L    C   F++RRWNCS+L  +    
Sbjct: 2  CSKLP---GLSRKQRRLCRRNPDVMASVGEGARLGIEECQHQFRNRRWNCSTLDSSSVFG 58

Query: 89 PDLITAHSEA 98
            L     E 
Sbjct: 59 KILKRGTRET 68


Wnt genes have been identified in vertebrates and invertebrates but not in plants, unicellular eukaryotes or prokaryotes. In humans, 19 WNT proteins are known. Because of their insolubility little is known about Wnt protein structure, but all have 23 or 24 Cys residues whose spacing is highly conserved. Signal transduction by Wnt proteins (including the Wnt/beta-catenin, the Wnt/Ca++, and the Wnt/polarity pathway) is mediated by receptors of the Frizzled and LDL-receptor-related protein (LRP) families. Length = 308

>gnl|CDD|128408 smart00097, WNT1, found in Wnt-1 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 100
KOG3913|consensus 356 99.91
PF00110 310 wnt: wnt family; InterPro: IPR005817 Wnt proteins 99.9
smart00097 305 WNT1 found in Wnt-1. 99.88
>KOG3913|consensus Back     alignment and domain information
Probab=99.91  E-value=2.1e-25  Score=176.37  Aligned_cols=72  Identities=31%  Similarity=0.555  Sum_probs=68.7

Q ss_pred             cccccccccccCCCHHHHHHHhcccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCcccccccCCCCCCC
Q psy13231         26 PNDCRRARMEYGFSKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDLITAHSEAEV  100 (100)
Q Consensus        26 ~~~C~~~~~~~gl~~~Q~~lC~~~p~lm~~i~~G~~~ai~ECq~QF~~~RWNCs~~~~~~~~~~~l~~gtREtAf  100 (100)
                      ..+|+.++   ||+++|+++|+++|++|++|.+|+++||.|||+||+++|||||+.+..+.|++++++|+|||||
T Consensus        45 ~~~C~~l~---gL~~~Q~~~Cr~~p~~~~sv~~G~~~~i~ECq~QFr~~RWNCs~~~~~~~~g~~l~~g~REsAF  116 (356)
T KOG3913|consen   45 KPLCDNLP---GLSPRQRRLCRRNPDVMPSVAEGAREGIQECQFQFRFRRWNCSTLDQLPVFGPLLSRGTRETAF  116 (356)
T ss_pred             ccchhhcc---ccCHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccccchhhcccchHHHH
Confidence            44899999   9999999999999999999999999999999999999999999987667899999999999998



>PF00110 wnt: wnt family; InterPro: IPR005817 Wnt proteins constitute a large family of secreted molecules that are involved in intercellular signalling during development Back     alignment and domain information
>smart00097 WNT1 found in Wnt-1 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query100
4f0a_B 316 Protein WNT-8, XWNT-8; WNT signaling, ligand-recep 2e-07
>4f0a_B Protein WNT-8, XWNT-8; WNT signaling, ligand-receptor complex, frizzled, fatty acylation, glycosylation, signaling protein; HET: NAG BMA MAN FUC PAM; 3.25A {Xenopus laevis} Length = 316 Back     alignment and structure
 Score = 46.1 bits (108), Expect = 2e-07
 Identities = 13/59 (22%), Positives = 16/59 (27%)

Query: 39 SKGQTKICKGWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTPDLITAHSE 97
          +       K +      V   A      C   F   RWNC    L       L +A  E
Sbjct: 5  NNFLMTGPKAYLTYSASVAVGAQNGIEECKYQFAWERWNCPESTLQLATHNGLRSATRE 63


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query100
4f0a_B 316 Protein WNT-8, XWNT-8; WNT signaling, ligand-recep 99.7
>4f0a_B Protein WNT-8, XWNT-8; WNT signaling, ligand-receptor complex, frizzled, fatty acylation, glycosylation, signaling protein; HET: NAG BMA MAN FUC PAM; 3.25A {Xenopus laevis} Back     alignment and structure
Probab=99.70  E-value=1.5e-18  Score=134.88  Aligned_cols=52  Identities=23%  Similarity=0.316  Sum_probs=45.1

Q ss_pred             cccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCccc-ccccCCCCCCC
Q psy13231         48 GWTEIMPHVTKAAYLAANTCTTLFQDRRWNCSSLFLTPKLTP-DLITAHSEAEV  100 (100)
Q Consensus        48 ~~p~lm~~i~~G~~~ai~ECq~QF~~~RWNCs~~~~~~~~~~-~l~~gtREtAf  100 (100)
                      ++|++|++|++|+++||+|||+||+++|||||... .+.+++ +|.+|||||||
T Consensus        14 ~~~~~~~~v~~Ga~~~i~ECq~QFr~~RWNCs~~~-~~~~~~~~l~~g~REtAF   66 (316)
T 4f0a_B           14 AYLTYSASVAVGAQNGIEECKYQFAWERWNCPEST-LQLATHNGLRSATRETSF   66 (316)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTTSSSCCCCCT-THHHHCTTCCSCCHHHHH
T ss_pred             cChHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCc-cccCCcccccCCCHHHHH
Confidence            57789999999999999999999999999999643 334555 68999999997




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00