Psyllid ID: psy13235
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 186 | ||||||
| 91089871 | 782 | PREDICTED: similar to Glycoprotein 93 CG | 0.795 | 0.189 | 0.655 | 2e-54 | |
| 193643557 | 784 | PREDICTED: endoplasmin-like [Acyrthosiph | 0.704 | 0.167 | 0.717 | 2e-54 | |
| 326532784 | 783 | predicted protein [Hordeum vulgare subsp | 0.704 | 0.167 | 0.717 | 4e-54 | |
| 332376398 | 781 | unknown [Dendroctonus ponderosae] | 0.752 | 0.179 | 0.691 | 4e-53 | |
| 170032518 | 794 | endoplasmin [Culex quinquefasciatus] gi| | 0.747 | 0.175 | 0.678 | 1e-50 | |
| 195108998 | 790 | GI24315 [Drosophila mojavensis] gi|19391 | 0.666 | 0.156 | 0.717 | 4e-50 | |
| 194907086 | 787 | GG11583 [Drosophila erecta] gi|190656122 | 0.677 | 0.160 | 0.714 | 6e-50 | |
| 347965870 | 800 | AGAP001424-PA [Anopheles gambiae str. PE | 0.693 | 0.161 | 0.705 | 6e-50 | |
| 195143967 | 792 | GL23644 [Drosophila persimilis] gi|19410 | 0.672 | 0.157 | 0.712 | 1e-49 | |
| 125773987 | 792 | GA18946 [Drosophila pseudoobscura pseudo | 0.672 | 0.157 | 0.712 | 1e-49 |
| >gi|91089871|ref|XP_971540.1| PREDICTED: similar to Glycoprotein 93 CG5520-PA [Tribolium castaneum] gi|270013565|gb|EFA10013.1| hypothetical protein TcasGA2_TC012185 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/154 (65%), Positives = 128/154 (83%), Gaps = 6/154 (3%)
Query: 10 IAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPR 69
+AKA +SERLSDSPCALVASMFGWTGNMERLA+SNAHQK+DDPQR YYL+QKKT+E+NPR
Sbjct: 629 VAKATVSERLSDSPCALVASMFGWTGNMERLAISNAHQKSDDPQRSYYLNQKKTLEINPR 688
Query: 70 HPLIRELYRRVKDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMRQTLGIS 129
HPL+REL +RV DDP D A ++A M+F+TATLRSG+ML+++ADFA+ +E+MMR+TLG+
Sbjct: 689 HPLMRELLKRVNDDPSDPTAKDMALMLFRTATLRSGYMLRETADFAQSIEAMMRKTLGVP 748
Query: 130 VDEKVEEDDDDIEEEEGAGDTEPSLQMEEITDDE 163
+DE VEE++D E D P + EEI DD+
Sbjct: 749 LDEGVEEEEDLPE------DGIPEEESEEIKDDD 776
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|193643557|ref|XP_001948937.1| PREDICTED: endoplasmin-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
| >gi|326532784|dbj|BAJ89237.1| predicted protein [Hordeum vulgare subsp. vulgare] | Back alignment and taxonomy information |
|---|
| >gi|332376398|gb|AEE63339.1| unknown [Dendroctonus ponderosae] | Back alignment and taxonomy information |
|---|
| >gi|170032518|ref|XP_001844128.1| endoplasmin [Culex quinquefasciatus] gi|167872598|gb|EDS35981.1| endoplasmin [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
| >gi|195108998|ref|XP_001999079.1| GI24315 [Drosophila mojavensis] gi|193915673|gb|EDW14540.1| GI24315 [Drosophila mojavensis] | Back alignment and taxonomy information |
|---|
| >gi|194907086|ref|XP_001981484.1| GG11583 [Drosophila erecta] gi|190656122|gb|EDV53354.1| GG11583 [Drosophila erecta] | Back alignment and taxonomy information |
|---|
| >gi|347965870|ref|XP_321706.5| AGAP001424-PA [Anopheles gambiae str. PEST] gi|333470317|gb|EAA01765.5| AGAP001424-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
| >gi|195143967|ref|XP_002012968.1| GL23644 [Drosophila persimilis] gi|194101911|gb|EDW23954.1| GL23644 [Drosophila persimilis] | Back alignment and taxonomy information |
|---|
| >gi|125773987|ref|XP_001358252.1| GA18946 [Drosophila pseudoobscura pseudoobscura] gi|54637988|gb|EAL27390.1| GA18946 [Drosophila pseudoobscura pseudoobscura] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 186 | ||||||
| FB|FBgn0039562 | 787 | Gp93 "Glycoprotein 93" [Drosop | 0.645 | 0.152 | 0.716 | 1.1e-43 | |
| UNIPROTKB|P08712 | 400 | HSP90B1 "Endoplasmin" [Mesocri | 0.639 | 0.297 | 0.529 | 8.1e-35 | |
| MGI|MGI:98817 | 802 | Hsp90b1 "heat shock protein 90 | 0.639 | 0.148 | 0.512 | 2e-32 | |
| RGD|1310482 | 804 | Hsp90b1 "heat shock protein 90 | 0.639 | 0.148 | 0.521 | 2.5e-32 | |
| UNIPROTKB|Q95M18 | 804 | HSP90B1 "Endoplasmin" [Bos tau | 0.639 | 0.148 | 0.521 | 4e-32 | |
| UNIPROTKB|F1SRK6 | 804 | HSP90B1 "Endoplasmin" [Sus scr | 0.639 | 0.148 | 0.521 | 4e-32 | |
| UNIPROTKB|Q29092 | 804 | HSP90B1 "Endoplasmin" [Sus scr | 0.639 | 0.148 | 0.521 | 4e-32 | |
| UNIPROTKB|P14625 | 803 | HSP90B1 "Endoplasmin" [Homo sa | 0.639 | 0.148 | 0.512 | 8.5e-32 | |
| UNIPROTKB|P41148 | 804 | HSP90B1 "Endoplasmin" [Canis l | 0.639 | 0.148 | 0.512 | 8.6e-32 | |
| UNIPROTKB|Q5R6F7 | 804 | HSP90B1 "Endoplasmin" [Pongo a | 0.639 | 0.148 | 0.512 | 8.6e-32 |
| FB|FBgn0039562 Gp93 "Glycoprotein 93" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 467 (169.5 bits), Expect = 1.1e-43, P = 1.1e-43
Identities = 86/120 (71%), Positives = 106/120 (88%)
Query: 10 IAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPR 69
I+KA++SERLS+SPCALVA +FGWTGNMERLAMSNAHQK+DDPQR YYL+QKKT+E+NPR
Sbjct: 628 ISKAQVSERLSNSPCALVAGVFGWTGNMERLAMSNAHQKSDDPQRTYYLNQKKTLEINPR 687
Query: 70 HPLIRELYRRVKDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMRQTLGIS 129
HPL+REL RRV+ D D A ++A MMF+TATLRSG+MLQ+++ FA +E MMRQTLG+S
Sbjct: 688 HPLMRELLRRVEADEADDTAKDMAVMMFRTATLRSGYMLQETSQFADSIEQMMRQTLGVS 747
|
|
| UNIPROTKB|P08712 HSP90B1 "Endoplasmin" [Mesocricetus auratus (taxid:10036)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:98817 Hsp90b1 "heat shock protein 90, beta (Grp94), member 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|1310482 Hsp90b1 "heat shock protein 90, beta, member 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q95M18 HSP90B1 "Endoplasmin" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1SRK6 HSP90B1 "Endoplasmin" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q29092 HSP90B1 "Endoplasmin" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P14625 HSP90B1 "Endoplasmin" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P41148 HSP90B1 "Endoplasmin" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5R6F7 HSP90B1 "Endoplasmin" [Pongo abelii (taxid:9601)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 186 | |||
| pfam00183 | 529 | pfam00183, HSP90, Hsp90 protein | 7e-39 | |
| PTZ00272 | 701 | PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp | 7e-26 | |
| PTZ00130 | 814 | PTZ00130, PTZ00130, heat shock protein 90; Provisi | 3e-22 | |
| PRK05218 | 613 | PRK05218, PRK05218, heat shock protein 90; Provisi | 3e-14 | |
| COG0326 | 623 | COG0326, HtpG, Molecular chaperone, HSP90 family [ | 9e-14 |
| >gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein | Back alignment and domain information |
|---|
Score = 138 bits (350), Expect = 7e-39
Identities = 64/152 (42%), Positives = 94/152 (61%), Gaps = 5/152 (3%)
Query: 10 IAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPR 69
+ K +S RL DSPCALV S +GW+ NMER+ + A + D Y+S KKT+E+NPR
Sbjct: 380 VEKVVVSNRLVDSPCALVTSQYGWSANMERIMKAQALR---DSSMSAYMSSKKTLEINPR 436
Query: 70 HPLIRELYRRVKDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMRQTLGIS 129
HP+I+EL +RV+ D D ++A ++++TA L SGF L+D FA + M++ L I
Sbjct: 437 HPIIKELRKRVEADKNDKTVKDLARLLYETALLTSGFSLEDPKAFASRIYRMIKLGLSID 496
Query: 130 VDEKVEEDDDDIEEEEGAGDTEPSLQ--MEEI 159
DE+VEE+D++ E E E + MEE+
Sbjct: 497 EDEEVEEEDEEAEVETTEPAEEDAEDSKMEEV 528
|
Length = 529 |
| >gnl|CDD|240341 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp83); Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|185466 PTZ00130, PTZ00130, heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235366 PRK05218, PRK05218, heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223403 COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 186 | |||
| PF00183 | 531 | HSP90: Hsp90 protein; InterPro: IPR001404 Molecula | 100.0 | |
| PTZ00272 | 701 | heat shock protein 83 kDa (Hsp83); Provisional | 100.0 | |
| KOG0019|consensus | 656 | 100.0 | ||
| KOG0020|consensus | 785 | 100.0 | ||
| PTZ00130 | 814 | heat shock protein 90; Provisional | 99.98 | |
| COG0326 | 623 | HtpG Molecular chaperone, HSP90 family [Posttransl | 99.92 | |
| PRK05218 | 613 | heat shock protein 90; Provisional | 99.92 | |
| PRK14083 | 601 | HSP90 family protein; Provisional | 99.82 |
| >PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=288.86 Aligned_cols=134 Identities=40% Similarity=0.738 Sum_probs=112.6
Q ss_pred CcccccCCcccEEEeccccCCCceEEEecCCCccHHHHHHHHHhhcccCCChhhhhhhccCcccccCCCCHHHHHHHHhh
Q psy13235 1 MRIATGASMIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRV 80 (186)
Q Consensus 1 ~~~~Lgd~~V~~V~vS~RL~~sPa~lv~~e~g~S~~Merimkaq~~~~~qd~~~~~~~~~kkiLEINP~HPLI~kL~~l~ 80 (186)
+|+.||+. |.+|++|.||++|||||+++++|+|++|||||+||+++ +.+++.++..++||||||+||||++|++++
T Consensus 374 ~k~~L~~k-V~~V~vS~RL~~sPa~lv~~e~g~s~~Merimkaqa~~---~~~~~~~~~~kkiLEINp~HPLIk~L~~~~ 449 (531)
T PF00183_consen 374 LKELLGDK-VEKVKVSNRLVDSPAVLVSSEYGWSANMERIMKAQAMA---DMSMQEYMPSKKILEINPNHPLIKKLLKLV 449 (531)
T ss_dssp HHHHHTTS-CSEEEE-SSSSSSSEEEEE-SSSB-HHHHHHHHHHHCC---STTTSSTSC--EEEEE-TTSHHHHHHHHHH
T ss_pred HHhhhhhh-hheecccccccCCcceeecccchhHHHHHHHhhhhccc---cccccccccccceeecCCCCHHHHHHHhhh
Confidence 36789995 99999999999999999999999999999999999865 333345667899999999999999999998
Q ss_pred cCCCCcHHHHHHHHhhhhhhhhcCCCCccCHHHHHHHHHHHHHHhcCCCCCcccCCCC
Q psy13235 81 KDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMRQTLGISVDEKVEEDD 138 (186)
Q Consensus 81 ~~d~~~e~a~~la~lLyD~AlLs~G~~leDp~~F~~Rin~LL~~~l~~~~~~~~~~~~ 138 (186)
..+.+++.++++|+||||+|+|++||.++||++|++|+|+||.++|+++.++++++++
T Consensus 450 ~~d~~d~~~~~la~~LyD~AlL~~G~~l~dp~~F~~Ri~~lL~~~l~~~~~~~~~~~~ 507 (531)
T PF00183_consen 450 EKDEDDELAKDLAEQLYDTALLASGFELEDPAAFAKRINKLLEKSLGVDPDAEVEEED 507 (531)
T ss_dssp HCCTTHHHHHHHHHHHHHHHHHHTTSS-SSHHHHHHHHHHHHHHTTC--STTTTTTGG
T ss_pred cccchhhHHHHHHHHHhhhhhhhcCCCcccHHHHHHHHHHHHHHhcCCCcCCcccccc
Confidence 8888888899999999999999999999999999999999999999999988766654
|
They assist in the folding of nascent polypeptide chains, and are also involved in the re-folding of denatured proteins following proteotoxic stress. As their name implies, the heat shock proteins were first identified as proteins that were up-regulated under conditions of elevated temperature. However, subsequent studies have shown that increased Hsp expression is induced by a variety of cellular stresses, including oxidative stress and inflammation. Five major Hsp families have been determined, and are categorized according to their molecular size (Hsp100, Hsp90, Hsp70, Hsp60, and the small Hsps). Hsps are involved in a variety of cellular processes that are ATP-dependent. These include: prevention of protein aggregation, protein degradation, protein trafficking, and maintenance of signalling proteins in a conformation that permits activation. Hsp90 chaperones are unique in their ability to regulate a specific subset of cellular signalling proteins that have been implicated in disease processes, including intracellular protein kinases, steroid hormone receptors, and growth factor receptors [].; GO: 0005524 ATP binding, 0051082 unfolded protein binding, 0006457 protein folding, 0006950 response to stress; PDB: 3K99_D 2H55_A 3RLP_A 1OSF_A 3R4M_A 1YES_A 1UY9_A 3FT8_A 2YE2_A 2QF6_A .... |
| >PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional | Back alignment and domain information |
|---|
| >KOG0019|consensus | Back alignment and domain information |
|---|
| >KOG0020|consensus | Back alignment and domain information |
|---|
| >PTZ00130 heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK05218 heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >PRK14083 HSP90 family protein; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 186 | ||||
| 2o1u_A | 666 | Structure Of Full Length Grp94 With Amp-Pnp Bound L | 3e-35 | ||
| 2o1t_A | 450 | Structure Of Middle Plus C-Terminal Domains (M+c) O | 6e-35 | ||
| 3hjc_A | 444 | Crystal Structure Of The Carboxy-Terminal Domain Of | 5e-23 | ||
| 3q6m_A | 448 | Crystal Structure Of Human Mc-Hsp90 In C2221 Space | 3e-18 | ||
| 2cge_A | 405 | Crystal Structure Of An Hsp90-Sba1 Closed Chaperone | 2e-14 | ||
| 2cg9_A | 677 | Crystal Structure Of An Hsp90-Sba1 Closed Chaperone | 1e-13 |
| >pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound Length = 666 | Back alignment and structure |
|
| >pdb|2O1T|A Chain A, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94 Length = 450 | Back alignment and structure |
| >pdb|3HJC|A Chain A, Crystal Structure Of The Carboxy-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312 Length = 444 | Back alignment and structure |
| >pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group Length = 448 | Back alignment and structure |
| >pdb|2CGE|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 405 | Back alignment and structure |
| >pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 677 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 186 | |||
| 3q6m_A | 448 | Heat shock protein HSP 90-alpha; three domains, tr | 3e-43 | |
| 3hjc_A | 444 | Heat shock protein 83-1; sleeping sickness, struct | 8e-42 | |
| 2cg9_A | 677 | ATP-dependent molecular chaperone HSP82; chaperone | 3e-35 | |
| 2o1u_A | 666 | Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, | 3e-35 | |
| 2cge_A | 405 | ATP-dependent molecular chaperone HSP82; chaperone | 2e-34 | |
| 1sf8_A | 126 | Chaperone protein HTPG; four helix bundle dimeriza | 5e-26 | |
| 2ioq_A | 624 | Chaperone protein HTPG; heat shock protein, HSP90; | 5e-25 | |
| 1y4s_A | 559 | Chaperone protein HTPG; HSP90, molecular chaperone | 4e-06 |
| >3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Length = 448 | Back alignment and structure |
|---|
Score = 148 bits (375), Expect = 3e-43
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 7/157 (4%)
Query: 10 IAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPR 69
+ K +S RL SPC +V S +GWT NMER+ + A + D Y++ KK +E+NP
Sbjct: 293 VEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALR---DNSTMGYMAAKKHLEINPD 349
Query: 70 HPLIRELYRRVKDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMRQTLGIS 129
H +I L ++ + D D ++ ++++TA L SGF L+D A + M++ LGI
Sbjct: 350 HSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGID 409
Query: 130 VDEKVEEDDDDIEEEE---GAGDTEPSLQMEEITDDE 163
D+ +D EE GD + S +MEE+
Sbjct: 410 EDDPTADDTSAAVTEEMPPLEGDDDTS-RMEEVDHHH 445
|
| >3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Length = 444 | Back alignment and structure |
|---|
| >2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Length = 677 | Back alignment and structure |
|---|
| >2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Length = 666 | Back alignment and structure |
|---|
| >2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Length = 405 | Back alignment and structure |
|---|
| >1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Length = 126 | Back alignment and structure |
|---|
| >2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Length = 624 | Back alignment and structure |
|---|
| >1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Length = 559 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 186 | |||
| 1sf8_A | 126 | Chaperone protein HTPG; four helix bundle dimeriza | 100.0 | |
| 3q6m_A | 448 | Heat shock protein HSP 90-alpha; three domains, tr | 100.0 | |
| 3hjc_A | 444 | Heat shock protein 83-1; sleeping sickness, struct | 100.0 | |
| 2cge_A | 405 | ATP-dependent molecular chaperone HSP82; chaperone | 100.0 | |
| 2o1u_A | 666 | Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, | 100.0 | |
| 2cg9_A | 677 | ATP-dependent molecular chaperone HSP82; chaperone | 99.97 | |
| 2ioq_A | 624 | Chaperone protein HTPG; heat shock protein, HSP90; | 99.95 |
| >1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=251.87 Aligned_cols=109 Identities=19% Similarity=0.332 Sum_probs=99.1
Q ss_pred CcccccCCcccEEEeccccCCCceEEEecCCCccHHHHHHHHHhhcccCCChhhhhhhccCcccccCCCCHHHHHHHHhh
Q psy13235 1 MRIATGASMIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRV 80 (186)
Q Consensus 1 ~~~~Lgd~~V~~V~vS~RL~~sPa~lv~~e~g~S~~Merimkaq~~~~~qd~~~~~~~~~kkiLEINP~HPLI~kL~~l~ 80 (186)
||++||++ |++|++|+||++||||||++++|||++|||||++|+ | .++..||||||||+||||++|++.
T Consensus 17 ~K~~L~dk-V~~V~vS~RL~~sPa~lv~~e~g~s~~Merimka~~----~-----~~~~~k~~LEINp~HplIk~L~~~- 85 (126)
T 1sf8_A 17 VKALLGER-VKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAG----Q-----KVPEVKYIFELNPDHVLVKRAADT- 85 (126)
T ss_dssp HHHHHGGG-SSEEEECCCCSSCCEEEECCTTSCCHHHHHHHHTTT----S-----CCCCCCCEEEECTTSHHHHHHHHC-
T ss_pred HHHHhcCc-ccEEEEeecccCCCEEEEecCcccCHHHHHHHHHhc----c-----ccccCCeeeeECCCCHHHHHHHHh-
Confidence 47899995 999999999999999999999999999999999984 2 234689999999999999999763
Q ss_pred cCCCCcHHHHHHHHhhhhhhhhcCCCCccCHHHHHHHHHHHHH
Q psy13235 81 KDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMR 123 (186)
Q Consensus 81 ~~d~~~e~a~~la~lLyD~AlLs~G~~leDp~~F~~Rin~LL~ 123 (186)
.+++.++++|++|||+|+|++||.++||+.|++|+|+||.
T Consensus 86 ---~~~~~~k~l~~lLyd~AlL~~G~~leDp~~F~~Ri~~ll~ 125 (126)
T 1sf8_A 86 ---EDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLLV 125 (126)
T ss_dssp ---CSHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHH
T ss_pred ---cChHHHHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHh
Confidence 3467799999999999999999999999999999999985
|
| >3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A | Back alignment and structure |
|---|
| >3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} | Back alignment and structure |
|---|
| >2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A | Back alignment and structure |
|---|
| >2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 186 | ||||
| d1sf8a_ | 115 | d.271.1.1 (A:) Chaperone protein HtpG {Escherichia | 2e-20 |
| >d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Length = 115 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HSP90 C-terminal domain superfamily: HSP90 C-terminal domain family: HSP90 C-terminal domain domain: Chaperone protein HtpG species: Escherichia coli [TaxId: 562]
Score = 79.9 bits (197), Expect = 2e-20
Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 13/113 (11%)
Query: 10 IAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPR 69
+ ++ RL+D+P + + M +L + + + K E+NP
Sbjct: 14 VKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPE---------VKYIFELNPD 64
Query: 70 HPLIRELYRRVKDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMM 122
H L++ D ++AK +E ++ A L L+D F + + ++
Sbjct: 65 HVLVKRA----ADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLL 113
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 186 | |||
| d1sf8a_ | 115 | Chaperone protein HtpG {Escherichia coli [TaxId: 5 | 100.0 |
| >d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HSP90 C-terminal domain superfamily: HSP90 C-terminal domain family: HSP90 C-terminal domain domain: Chaperone protein HtpG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1e-38 Score=242.68 Aligned_cols=109 Identities=19% Similarity=0.332 Sum_probs=99.1
Q ss_pred CcccccCCcccEEEeccccCCCceEEEecCCCccHHHHHHHHHhhcccCCChhhhhhhccCcccccCCCCHHHHHHHHhh
Q psy13235 1 MRIATGASMIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRV 80 (186)
Q Consensus 1 ~~~~Lgd~~V~~V~vS~RL~~sPa~lv~~e~g~S~~Merimkaq~~~~~qd~~~~~~~~~kkiLEINP~HPLI~kL~~l~ 80 (186)
+|+.||++ |++|++|+||++||||||++++|||++|+|||++|+ | .++..+|||||||+||||++|.+.
T Consensus 6 ~K~~L~d~-V~~V~~S~RL~~sP~~lv~~~~~~s~~M~kimk~~~----~-----~~~~~k~iLEiNp~H~lIk~l~~~- 74 (115)
T d1sf8a_ 6 VKALLGER-VKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAG----Q-----KVPEVKYIFELNPDHVLVKRAADT- 74 (115)
T ss_dssp HHHHHGGG-SSEEEECCCCSSCCEEEECCTTSCCHHHHHHHHTTT----S-----CCCCCCCEEEECTTSHHHHHHHHC-
T ss_pred HHHHhcCc-ccEEeeccccccCceeeecCCcchHHHHHHHHHHhc----c-----ccccccceeeeCCCCHHHHHHHhc-
Confidence 47899985 999999999999999999999999999999999974 2 355689999999999999999753
Q ss_pred cCCCCcHHHHHHHHhhhhhhhhcCCCCccCHHHHHHHHHHHHH
Q psy13235 81 KDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMR 123 (186)
Q Consensus 81 ~~d~~~e~a~~la~lLyD~AlLs~G~~leDp~~F~~Rin~LL~ 123 (186)
.+++.+++++++|||+|+|++|+.++||+.|++|+|+||.
T Consensus 75 ---~~~~~~~~~~~~L~d~A~l~~G~~l~Dp~~f~~ri~~ll~ 114 (115)
T d1sf8a_ 75 ---EDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLLV 114 (115)
T ss_dssp ---CSHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHH
T ss_pred ---cchHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHh
Confidence 4567899999999999999999999999999999999985
|