Psyllid ID: psy13235


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180------
MRIATGASMIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMRQTLGISVDEKVEEDDDDIEEEEGAGDTEPSLQMEEITDDEPQTTCVQCEGLNHCITKRFNYEL
cccccccccccEEEEccccccccEEEEEccccccHHHHHHHHHHccccccccHHHHHHHcccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccc
ccHHHHcccEEEEEEEcccccccEEEEEccccccHHHHHHHHHHHHHccccccHHHHHHHcccEEEccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHccccccccccEEEccccccEEEEEcccc
MRIATGASMIAKAEIserlsdspcALVASMFGWTGNMERLAMSnahqkaddpqrkyylsqkktmevnprhplIRELYRRvkddpedaKATEIATMMFQTAtlrsgfmlqdSADFAKHVESMMRQTlgisvdekveeddddieeeegagdtepslqmeeitddepqttcvqceglnhcitkrfnyel
mriatgasMIAKAeiserlsdspCALVASMFGWTGNMERLAMSnahqkaddpQRKYYLsqkktmevnprhplirELYRRVKDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMRQtlgisvdekveeDDDDIEeeegagdtepslqMEEITDDEPQTTCVQCEGLNHCITKRFNYEL
MRIATGASMIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMRQTLGISVdekveeddddieeeegagdtePSLQMEEITDDEPQTTCVQCEGLNHCITKRFNYEL
**********************PCALVASMFGWTGNM**************************************LY**************IATMMFQTATLRSGFMLQ*********************************************************TCVQCEGLNHCITKRFN***
****TGASMIAKAEISERLSDSPCALVASMFGWTGNMERLAMS********************MEVNPRHPLIRELY*********AKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMRQTLGISV**************************************VQCEGLNHCITKRFNYE*
********MIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMRQTLGISVDE********************SLQMEEITDDEPQTTCVQCEGLNHCITKRFNYEL
*RIATGASMIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMRQTLGIS************************************TTCVQCEGLNHCITKRFNYEL
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRIATGASMIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMRQTLGISVDEKVEEDDDDIEEEEGAGDTEPSLQMEEITDDEPQTTCVQCEGLNHCITKRFNYEL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query186 2.2.26 [Sep-21-2011]
P08110795 Endoplasmin OS=Gallus gal yes N/A 0.672 0.157 0.512 7e-36
Q95M18804 Endoplasmin OS=Bos taurus yes N/A 0.672 0.155 0.52 7e-36
Q29092804 Endoplasmin OS=Sus scrofa yes N/A 0.672 0.155 0.52 9e-36
Q4R520804 Endoplasmin OS=Macaca fas N/A N/A 0.672 0.155 0.512 2e-35
Q5R6F7804 Endoplasmin OS=Pongo abel yes N/A 0.672 0.155 0.512 2e-35
P41148804 Endoplasmin OS=Canis fami yes N/A 0.672 0.155 0.512 2e-35
P14625803 Endoplasmin OS=Homo sapie yes N/A 0.672 0.155 0.512 2e-35
P08113802 Endoplasmin OS=Mus muscul yes N/A 0.736 0.170 0.459 6e-35
P08712400 Endoplasmin (Fragment) OS N/A N/A 0.672 0.312 0.512 7e-35
Q66HD0804 Endoplasmin OS=Rattus nor yes N/A 0.672 0.155 0.504 1e-34
>sp|P08110|ENPL_CHICK Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1 Back     alignment and function desciption
 Score =  149 bits (377), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 64/125 (51%), Positives = 93/125 (74%)

Query: 10  IAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPR 69
           I KA +S+RL+ SPCALVAS +GW+GNMER+  + A+Q   D    YY SQKKT E+NPR
Sbjct: 630 IEKAVLSQRLTQSPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPR 689

Query: 70  HPLIRELYRRVKDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMRQTLGIS 129
           HPLI+++ RRVK++ +D   +++A ++F+TATLRSG+ML D+ ++   +E M+R +L I 
Sbjct: 690 HPLIKDMLRRVKENEDDKTVSDLAVVLFETATLRSGYMLPDTKEYGDRIERMLRLSLNID 749

Query: 130 VDEKV 134
           +D KV
Sbjct: 750 LDAKV 754




Molecular chaperone that functions in the processing and transport of secreted proteins. Has ATPase activity.
Gallus gallus (taxid: 9031)
>sp|Q95M18|ENPL_BOVIN Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1 Back     alignment and function description
>sp|Q29092|ENPL_PIG Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3 Back     alignment and function description
>sp|Q4R520|ENPL_MACFA Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2 SV=1 Back     alignment and function description
>sp|Q5R6F7|ENPL_PONAB Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1 Back     alignment and function description
>sp|P41148|ENPL_CANFA Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV=1 Back     alignment and function description
>sp|P14625|ENPL_HUMAN Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1 Back     alignment and function description
>sp|P08113|ENPL_MOUSE Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2 Back     alignment and function description
>sp|P08712|ENPL_MESAU Endoplasmin (Fragment) OS=Mesocricetus auratus GN=HSP90B1 PE=1 SV=1 Back     alignment and function description
>sp|Q66HD0|ENPL_RAT Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query186
91089871 782 PREDICTED: similar to Glycoprotein 93 CG 0.795 0.189 0.655 2e-54
193643557 784 PREDICTED: endoplasmin-like [Acyrthosiph 0.704 0.167 0.717 2e-54
326532784 783 predicted protein [Hordeum vulgare subsp 0.704 0.167 0.717 4e-54
332376398 781 unknown [Dendroctonus ponderosae] 0.752 0.179 0.691 4e-53
170032518 794 endoplasmin [Culex quinquefasciatus] gi| 0.747 0.175 0.678 1e-50
195108998 790 GI24315 [Drosophila mojavensis] gi|19391 0.666 0.156 0.717 4e-50
194907086 787 GG11583 [Drosophila erecta] gi|190656122 0.677 0.160 0.714 6e-50
347965870 800 AGAP001424-PA [Anopheles gambiae str. PE 0.693 0.161 0.705 6e-50
195143967 792 GL23644 [Drosophila persimilis] gi|19410 0.672 0.157 0.712 1e-49
125773987 792 GA18946 [Drosophila pseudoobscura pseudo 0.672 0.157 0.712 1e-49
>gi|91089871|ref|XP_971540.1| PREDICTED: similar to Glycoprotein 93 CG5520-PA [Tribolium castaneum] gi|270013565|gb|EFA10013.1| hypothetical protein TcasGA2_TC012185 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  216 bits (551), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 101/154 (65%), Positives = 128/154 (83%), Gaps = 6/154 (3%)

Query: 10  IAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPR 69
           +AKA +SERLSDSPCALVASMFGWTGNMERLA+SNAHQK+DDPQR YYL+QKKT+E+NPR
Sbjct: 629 VAKATVSERLSDSPCALVASMFGWTGNMERLAISNAHQKSDDPQRSYYLNQKKTLEINPR 688

Query: 70  HPLIRELYRRVKDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMRQTLGIS 129
           HPL+REL +RV DDP D  A ++A M+F+TATLRSG+ML+++ADFA+ +E+MMR+TLG+ 
Sbjct: 689 HPLMRELLKRVNDDPSDPTAKDMALMLFRTATLRSGYMLRETADFAQSIEAMMRKTLGVP 748

Query: 130 VDEKVEEDDDDIEEEEGAGDTEPSLQMEEITDDE 163
           +DE VEE++D  E      D  P  + EEI DD+
Sbjct: 749 LDEGVEEEEDLPE------DGIPEEESEEIKDDD 776




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193643557|ref|XP_001948937.1| PREDICTED: endoplasmin-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|326532784|dbj|BAJ89237.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information
>gi|332376398|gb|AEE63339.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
>gi|170032518|ref|XP_001844128.1| endoplasmin [Culex quinquefasciatus] gi|167872598|gb|EDS35981.1| endoplasmin [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|195108998|ref|XP_001999079.1| GI24315 [Drosophila mojavensis] gi|193915673|gb|EDW14540.1| GI24315 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|194907086|ref|XP_001981484.1| GG11583 [Drosophila erecta] gi|190656122|gb|EDV53354.1| GG11583 [Drosophila erecta] Back     alignment and taxonomy information
>gi|347965870|ref|XP_321706.5| AGAP001424-PA [Anopheles gambiae str. PEST] gi|333470317|gb|EAA01765.5| AGAP001424-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|195143967|ref|XP_002012968.1| GL23644 [Drosophila persimilis] gi|194101911|gb|EDW23954.1| GL23644 [Drosophila persimilis] Back     alignment and taxonomy information
>gi|125773987|ref|XP_001358252.1| GA18946 [Drosophila pseudoobscura pseudoobscura] gi|54637988|gb|EAL27390.1| GA18946 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query186
FB|FBgn0039562787 Gp93 "Glycoprotein 93" [Drosop 0.645 0.152 0.716 1.1e-43
UNIPROTKB|P08712400 HSP90B1 "Endoplasmin" [Mesocri 0.639 0.297 0.529 8.1e-35
MGI|MGI:98817802 Hsp90b1 "heat shock protein 90 0.639 0.148 0.512 2e-32
RGD|1310482804 Hsp90b1 "heat shock protein 90 0.639 0.148 0.521 2.5e-32
UNIPROTKB|Q95M18804 HSP90B1 "Endoplasmin" [Bos tau 0.639 0.148 0.521 4e-32
UNIPROTKB|F1SRK6804 HSP90B1 "Endoplasmin" [Sus scr 0.639 0.148 0.521 4e-32
UNIPROTKB|Q29092804 HSP90B1 "Endoplasmin" [Sus scr 0.639 0.148 0.521 4e-32
UNIPROTKB|P14625803 HSP90B1 "Endoplasmin" [Homo sa 0.639 0.148 0.512 8.5e-32
UNIPROTKB|P41148804 HSP90B1 "Endoplasmin" [Canis l 0.639 0.148 0.512 8.6e-32
UNIPROTKB|Q5R6F7804 HSP90B1 "Endoplasmin" [Pongo a 0.639 0.148 0.512 8.6e-32
FB|FBgn0039562 Gp93 "Glycoprotein 93" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 467 (169.5 bits), Expect = 1.1e-43, P = 1.1e-43
 Identities = 86/120 (71%), Positives = 106/120 (88%)

Query:    10 IAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPR 69
             I+KA++SERLS+SPCALVA +FGWTGNMERLAMSNAHQK+DDPQR YYL+QKKT+E+NPR
Sbjct:   628 ISKAQVSERLSNSPCALVAGVFGWTGNMERLAMSNAHQKSDDPQRTYYLNQKKTLEINPR 687

Query:    70 HPLIRELYRRVKDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMRQTLGIS 129
             HPL+REL RRV+ D  D  A ++A MMF+TATLRSG+MLQ+++ FA  +E MMRQTLG+S
Sbjct:   688 HPLMRELLRRVEADEADDTAKDMAVMMFRTATLRSGYMLQETSQFADSIEQMMRQTLGVS 747




GO:0051082 "unfolded protein binding" evidence=ISS
GO:0006457 "protein folding" evidence=ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0006950 "response to stress" evidence=IEA
GO:0005811 "lipid particle" evidence=IDA
GO:0005615 "extracellular space" evidence=IDA
GO:0061031 "endodermal digestive tract morphogenesis" evidence=IMP
GO:0007494 "midgut development" evidence=IMP
UNIPROTKB|P08712 HSP90B1 "Endoplasmin" [Mesocricetus auratus (taxid:10036)] Back     alignment and assigned GO terms
MGI|MGI:98817 Hsp90b1 "heat shock protein 90, beta (Grp94), member 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1310482 Hsp90b1 "heat shock protein 90, beta, member 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q95M18 HSP90B1 "Endoplasmin" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SRK6 HSP90B1 "Endoplasmin" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q29092 HSP90B1 "Endoplasmin" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|P14625 HSP90B1 "Endoplasmin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P41148 HSP90B1 "Endoplasmin" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q5R6F7 HSP90B1 "Endoplasmin" [Pongo abelii (taxid:9601)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q29092ENPL_PIGNo assigned EC number0.520.67200.1554yesN/A
Q95M18ENPL_BOVINNo assigned EC number0.520.67200.1554yesN/A
P41148ENPL_CANFANo assigned EC number0.5120.67200.1554yesN/A
P14625ENPL_HUMANNo assigned EC number0.5120.67200.1556yesN/A
P08110ENPL_CHICKNo assigned EC number0.5120.67200.1572yesN/A
Q5R6F7ENPL_PONABNo assigned EC number0.5120.67200.1554yesN/A
Q66HD0ENPL_RATNo assigned EC number0.5040.67200.1554yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query186
pfam00183529 pfam00183, HSP90, Hsp90 protein 7e-39
PTZ00272701 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp 7e-26
PTZ00130814 PTZ00130, PTZ00130, heat shock protein 90; Provisi 3e-22
PRK05218613 PRK05218, PRK05218, heat shock protein 90; Provisi 3e-14
COG0326623 COG0326, HtpG, Molecular chaperone, HSP90 family [ 9e-14
>gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein Back     alignment and domain information
 Score =  138 bits (350), Expect = 7e-39
 Identities = 64/152 (42%), Positives = 94/152 (61%), Gaps = 5/152 (3%)

Query: 10  IAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPR 69
           + K  +S RL DSPCALV S +GW+ NMER+  + A +   D     Y+S KKT+E+NPR
Sbjct: 380 VEKVVVSNRLVDSPCALVTSQYGWSANMERIMKAQALR---DSSMSAYMSSKKTLEINPR 436

Query: 70  HPLIRELYRRVKDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMRQTLGIS 129
           HP+I+EL +RV+ D  D    ++A ++++TA L SGF L+D   FA  +  M++  L I 
Sbjct: 437 HPIIKELRKRVEADKNDKTVKDLARLLYETALLTSGFSLEDPKAFASRIYRMIKLGLSID 496

Query: 130 VDEKVEEDDDDIEEEEGAGDTEPSLQ--MEEI 159
            DE+VEE+D++ E E      E +    MEE+
Sbjct: 497 EDEEVEEEDEEAEVETTEPAEEDAEDSKMEEV 528


Length = 529

>gnl|CDD|240341 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information
>gnl|CDD|185466 PTZ00130, PTZ00130, heat shock protein 90; Provisional Back     alignment and domain information
>gnl|CDD|235366 PRK05218, PRK05218, heat shock protein 90; Provisional Back     alignment and domain information
>gnl|CDD|223403 COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 186
PF00183531 HSP90: Hsp90 protein; InterPro: IPR001404 Molecula 100.0
PTZ00272701 heat shock protein 83 kDa (Hsp83); Provisional 100.0
KOG0019|consensus656 100.0
KOG0020|consensus785 100.0
PTZ00130814 heat shock protein 90; Provisional 99.98
COG0326623 HtpG Molecular chaperone, HSP90 family [Posttransl 99.92
PRK05218613 heat shock protein 90; Provisional 99.92
PRK14083601 HSP90 family protein; Provisional 99.82
>PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell [] Back     alignment and domain information
Probab=100.00  E-value=2.5e-37  Score=288.86  Aligned_cols=134  Identities=40%  Similarity=0.738  Sum_probs=112.6

Q ss_pred             CcccccCCcccEEEeccccCCCceEEEecCCCccHHHHHHHHHhhcccCCChhhhhhhccCcccccCCCCHHHHHHHHhh
Q psy13235          1 MRIATGASMIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRV   80 (186)
Q Consensus         1 ~~~~Lgd~~V~~V~vS~RL~~sPa~lv~~e~g~S~~Merimkaq~~~~~qd~~~~~~~~~kkiLEINP~HPLI~kL~~l~   80 (186)
                      +|+.||+. |.+|++|.||++|||||+++++|+|++|||||+||+++   +.+++.++..++||||||+||||++|++++
T Consensus       374 ~k~~L~~k-V~~V~vS~RL~~sPa~lv~~e~g~s~~Merimkaqa~~---~~~~~~~~~~kkiLEINp~HPLIk~L~~~~  449 (531)
T PF00183_consen  374 LKELLGDK-VEKVKVSNRLVDSPAVLVSSEYGWSANMERIMKAQAMA---DMSMQEYMPSKKILEINPNHPLIKKLLKLV  449 (531)
T ss_dssp             HHHHHTTS-CSEEEE-SSSSSSSEEEEE-SSSB-HHHHHHHHHHHCC---STTTSSTSC--EEEEE-TTSHHHHHHHHHH
T ss_pred             HHhhhhhh-hheecccccccCCcceeecccchhHHHHHHHhhhhccc---cccccccccccceeecCCCCHHHHHHHhhh
Confidence            36789995 99999999999999999999999999999999999865   333345667899999999999999999998


Q ss_pred             cCCCCcHHHHHHHHhhhhhhhhcCCCCccCHHHHHHHHHHHHHHhcCCCCCcccCCCC
Q psy13235         81 KDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMRQTLGISVDEKVEEDD  138 (186)
Q Consensus        81 ~~d~~~e~a~~la~lLyD~AlLs~G~~leDp~~F~~Rin~LL~~~l~~~~~~~~~~~~  138 (186)
                      ..+.+++.++++|+||||+|+|++||.++||++|++|+|+||.++|+++.++++++++
T Consensus       450 ~~d~~d~~~~~la~~LyD~AlL~~G~~l~dp~~F~~Ri~~lL~~~l~~~~~~~~~~~~  507 (531)
T PF00183_consen  450 EKDEDDELAKDLAEQLYDTALLASGFELEDPAAFAKRINKLLEKSLGVDPDAEVEEED  507 (531)
T ss_dssp             HCCTTHHHHHHHHHHHHHHHHHHTTSS-SSHHHHHHHHHHHHHHTTC--STTTTTTGG
T ss_pred             cccchhhHHHHHHHHHhhhhhhhcCCCcccHHHHHHHHHHHHHHhcCCCcCCcccccc
Confidence            8888888899999999999999999999999999999999999999999988766654



They assist in the folding of nascent polypeptide chains, and are also involved in the re-folding of denatured proteins following proteotoxic stress. As their name implies, the heat shock proteins were first identified as proteins that were up-regulated under conditions of elevated temperature. However, subsequent studies have shown that increased Hsp expression is induced by a variety of cellular stresses, including oxidative stress and inflammation. Five major Hsp families have been determined, and are categorized according to their molecular size (Hsp100, Hsp90, Hsp70, Hsp60, and the small Hsps). Hsps are involved in a variety of cellular processes that are ATP-dependent. These include: prevention of protein aggregation, protein degradation, protein trafficking, and maintenance of signalling proteins in a conformation that permits activation. Hsp90 chaperones are unique in their ability to regulate a specific subset of cellular signalling proteins that have been implicated in disease processes, including intracellular protein kinases, steroid hormone receptors, and growth factor receptors [].; GO: 0005524 ATP binding, 0051082 unfolded protein binding, 0006457 protein folding, 0006950 response to stress; PDB: 3K99_D 2H55_A 3RLP_A 1OSF_A 3R4M_A 1YES_A 1UY9_A 3FT8_A 2YE2_A 2QF6_A ....

>PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information
>KOG0019|consensus Back     alignment and domain information
>KOG0020|consensus Back     alignment and domain information
>PTZ00130 heat shock protein 90; Provisional Back     alignment and domain information
>COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05218 heat shock protein 90; Provisional Back     alignment and domain information
>PRK14083 HSP90 family protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query186
2o1u_A666 Structure Of Full Length Grp94 With Amp-Pnp Bound L 3e-35
2o1t_A450 Structure Of Middle Plus C-Terminal Domains (M+c) O 6e-35
3hjc_A444 Crystal Structure Of The Carboxy-Terminal Domain Of 5e-23
3q6m_A448 Crystal Structure Of Human Mc-Hsp90 In C2221 Space 3e-18
2cge_A405 Crystal Structure Of An Hsp90-Sba1 Closed Chaperone 2e-14
2cg9_A677 Crystal Structure Of An Hsp90-Sba1 Closed Chaperone 1e-13
>pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound Length = 666 Back     alignment and structure

Iteration: 1

Score = 144 bits (362), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 61/119 (51%), Positives = 89/119 (74%) Query: 10 IAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPR 69 I KA +S+RL++SPCALVAS +GW+GNMER+ + A+Q D YY SQKKT E+NPR Sbjct: 543 IEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPR 602 Query: 70 HPLIRELYRRVKDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMRQTLGI 128 HPLI+++ RRVK+D +D +++A ++F+TATLRSG++L D+ + +E M+R +L I Sbjct: 603 HPLIKDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNI 661
>pdb|2O1T|A Chain A, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94 Length = 450 Back     alignment and structure
>pdb|3HJC|A Chain A, Crystal Structure Of The Carboxy-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312 Length = 444 Back     alignment and structure
>pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group Length = 448 Back     alignment and structure
>pdb|2CGE|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 405 Back     alignment and structure
>pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 677 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query186
3q6m_A448 Heat shock protein HSP 90-alpha; three domains, tr 3e-43
3hjc_A444 Heat shock protein 83-1; sleeping sickness, struct 8e-42
2cg9_A677 ATP-dependent molecular chaperone HSP82; chaperone 3e-35
2o1u_A666 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 3e-35
2cge_A405 ATP-dependent molecular chaperone HSP82; chaperone 2e-34
1sf8_A126 Chaperone protein HTPG; four helix bundle dimeriza 5e-26
2ioq_A624 Chaperone protein HTPG; heat shock protein, HSP90; 5e-25
1y4s_A559 Chaperone protein HTPG; HSP90, molecular chaperone 4e-06
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Length = 448 Back     alignment and structure
 Score =  148 bits (375), Expect = 3e-43
 Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 7/157 (4%)

Query: 10  IAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPR 69
           + K  +S RL  SPC +V S +GWT NMER+  + A +   D     Y++ KK +E+NP 
Sbjct: 293 VEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALR---DNSTMGYMAAKKHLEINPD 349

Query: 70  HPLIRELYRRVKDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMRQTLGIS 129
           H +I  L ++ + D  D    ++  ++++TA L SGF L+D    A  +  M++  LGI 
Sbjct: 350 HSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGID 409

Query: 130 VDEKVEEDDDDIEEEE---GAGDTEPSLQMEEITDDE 163
            D+   +D      EE     GD + S +MEE+    
Sbjct: 410 EDDPTADDTSAAVTEEMPPLEGDDDTS-RMEEVDHHH 445


>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Length = 444 Back     alignment and structure
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Length = 677 Back     alignment and structure
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Length = 666 Back     alignment and structure
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Length = 405 Back     alignment and structure
>1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Length = 126 Back     alignment and structure
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Length = 624 Back     alignment and structure
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Length = 559 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query186
1sf8_A126 Chaperone protein HTPG; four helix bundle dimeriza 100.0
3q6m_A448 Heat shock protein HSP 90-alpha; three domains, tr 100.0
3hjc_A444 Heat shock protein 83-1; sleeping sickness, struct 100.0
2cge_A405 ATP-dependent molecular chaperone HSP82; chaperone 100.0
2o1u_A666 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 100.0
2cg9_A677 ATP-dependent molecular chaperone HSP82; chaperone 99.97
2ioq_A624 Chaperone protein HTPG; heat shock protein, HSP90; 99.95
>1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Back     alignment and structure
Probab=100.00  E-value=2.3e-39  Score=251.87  Aligned_cols=109  Identities=19%  Similarity=0.332  Sum_probs=99.1

Q ss_pred             CcccccCCcccEEEeccccCCCceEEEecCCCccHHHHHHHHHhhcccCCChhhhhhhccCcccccCCCCHHHHHHHHhh
Q psy13235          1 MRIATGASMIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRV   80 (186)
Q Consensus         1 ~~~~Lgd~~V~~V~vS~RL~~sPa~lv~~e~g~S~~Merimkaq~~~~~qd~~~~~~~~~kkiLEINP~HPLI~kL~~l~   80 (186)
                      ||++||++ |++|++|+||++||||||++++|||++|||||++|+    |     .++..||||||||+||||++|++. 
T Consensus        17 ~K~~L~dk-V~~V~vS~RL~~sPa~lv~~e~g~s~~Merimka~~----~-----~~~~~k~~LEINp~HplIk~L~~~-   85 (126)
T 1sf8_A           17 VKALLGER-VKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAG----Q-----KVPEVKYIFELNPDHVLVKRAADT-   85 (126)
T ss_dssp             HHHHHGGG-SSEEEECCCCSSCCEEEECCTTSCCHHHHHHHHTTT----S-----CCCCCCCEEEECTTSHHHHHHHHC-
T ss_pred             HHHHhcCc-ccEEEEeecccCCCEEEEecCcccCHHHHHHHHHhc----c-----ccccCCeeeeECCCCHHHHHHHHh-
Confidence            47899995 999999999999999999999999999999999984    2     234689999999999999999763 


Q ss_pred             cCCCCcHHHHHHHHhhhhhhhhcCCCCccCHHHHHHHHHHHHH
Q psy13235         81 KDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMR  123 (186)
Q Consensus        81 ~~d~~~e~a~~la~lLyD~AlLs~G~~leDp~~F~~Rin~LL~  123 (186)
                         .+++.++++|++|||+|+|++||.++||+.|++|+|+||.
T Consensus        86 ---~~~~~~k~l~~lLyd~AlL~~G~~leDp~~F~~Ri~~ll~  125 (126)
T 1sf8_A           86 ---EDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLLV  125 (126)
T ss_dssp             ---CSHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHH
T ss_pred             ---cChHHHHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHh
Confidence               3467799999999999999999999999999999999985



>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Back     alignment and structure
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Back     alignment and structure
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Back     alignment and structure
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Back     alignment and structure
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Back     alignment and structure
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 186
d1sf8a_115 d.271.1.1 (A:) Chaperone protein HtpG {Escherichia 2e-20
>d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: HSP90 C-terminal domain
superfamily: HSP90 C-terminal domain
family: HSP90 C-terminal domain
domain: Chaperone protein HtpG
species: Escherichia coli [TaxId: 562]
 Score = 79.9 bits (197), Expect = 2e-20
 Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 13/113 (11%)

Query: 10  IAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPR 69
           +    ++ RL+D+P  +       +  M +L  +   +  +          K   E+NP 
Sbjct: 14  VKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPE---------VKYIFELNPD 64

Query: 70  HPLIRELYRRVKDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMM 122
           H L++       D  ++AK +E   ++   A L     L+D   F + +  ++
Sbjct: 65  HVLVKRA----ADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLL 113


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query186
d1sf8a_115 Chaperone protein HtpG {Escherichia coli [TaxId: 5 100.0
>d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: HSP90 C-terminal domain
superfamily: HSP90 C-terminal domain
family: HSP90 C-terminal domain
domain: Chaperone protein HtpG
species: Escherichia coli [TaxId: 562]
Probab=100.00  E-value=1e-38  Score=242.68  Aligned_cols=109  Identities=19%  Similarity=0.332  Sum_probs=99.1

Q ss_pred             CcccccCCcccEEEeccccCCCceEEEecCCCccHHHHHHHHHhhcccCCChhhhhhhccCcccccCCCCHHHHHHHHhh
Q psy13235          1 MRIATGASMIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRV   80 (186)
Q Consensus         1 ~~~~Lgd~~V~~V~vS~RL~~sPa~lv~~e~g~S~~Merimkaq~~~~~qd~~~~~~~~~kkiLEINP~HPLI~kL~~l~   80 (186)
                      +|+.||++ |++|++|+||++||||||++++|||++|+|||++|+    |     .++..+|||||||+||||++|.+. 
T Consensus         6 ~K~~L~d~-V~~V~~S~RL~~sP~~lv~~~~~~s~~M~kimk~~~----~-----~~~~~k~iLEiNp~H~lIk~l~~~-   74 (115)
T d1sf8a_           6 VKALLGER-VKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAG----Q-----KVPEVKYIFELNPDHVLVKRAADT-   74 (115)
T ss_dssp             HHHHHGGG-SSEEEECCCCSSCCEEEECCTTSCCHHHHHHHHTTT----S-----CCCCCCCEEEECTTSHHHHHHHHC-
T ss_pred             HHHHhcCc-ccEEeeccccccCceeeecCCcchHHHHHHHHHHhc----c-----ccccccceeeeCCCCHHHHHHHhc-
Confidence            47899985 999999999999999999999999999999999974    2     355689999999999999999753 


Q ss_pred             cCCCCcHHHHHHHHhhhhhhhhcCCCCccCHHHHHHHHHHHHH
Q psy13235         81 KDDPEDAKATEIATMMFQTATLRSGFMLQDSADFAKHVESMMR  123 (186)
Q Consensus        81 ~~d~~~e~a~~la~lLyD~AlLs~G~~leDp~~F~~Rin~LL~  123 (186)
                         .+++.+++++++|||+|+|++|+.++||+.|++|+|+||.
T Consensus        75 ---~~~~~~~~~~~~L~d~A~l~~G~~l~Dp~~f~~ri~~ll~  114 (115)
T d1sf8a_          75 ---EDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLLV  114 (115)
T ss_dssp             ---CSHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHH
T ss_pred             ---cchHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHh
Confidence               4567899999999999999999999999999999999985