Psyllid ID: psy13237

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80----
Protein Sequence
MFDRSLADFIEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAISENYMIIRKTCD
Secondary Structure (PSIPRED)
ccccEEEEEEccccEEEEEEEEEEEEEEEEcEEEEEEEEccccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccHHHHccccccEEEEEEEEEEEEcccEEEEEEEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MFDRSLadfiegnnvevkgNLKVQVHYYedgnvqlvsskDIKETVVVTSEEQTAREIVKLIEESETAYQQAISENYMIIRKTCD
Flexible Loop (DISEMBL)
mfdrsladfiegnnvevkgnLKVQVHYYEDgnvqlvsskdiketvvvtseeqtarEIVKLIEESetayqqaisenyMIIRKTCD
Low Complexity Region (SEG)
MFDRSLADFIEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAISENYMIIRKTCD
Disordered region (IsUnstruct)
*******DFIEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAISENYMII*****
Disordered Region (DISOPRED)
*FDRSLADFIEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAISENY*II*****
Disordered Region (DISEMBL)
MFDRSLADFIEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAISENYMIIRKTCD
Disordered Region (DISPRO)
****SLADFIEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAISENYMIIRKTCD
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFDRSLADFIEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAISENYMIIRKTCD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	84	2.2.26 [Sep-21-2011]
Q9W2N0	286	F-actin-capping protein s	yes	N/A	0.821	0.241	0.623	2e-18
P25229	256	F-actin-capping protein s	N/A	N/A	0.869	0.285	0.561	2e-18
A4FUA8	286	F-actin-capping protein s	yes	N/A	0.869	0.255	0.561	4e-17
P28497	286	F-actin-capping protein s	yes	N/A	0.952	0.279	0.530	5e-17
Q00PJ7	286	F-actin-capping protein s	N/A	N/A	0.940	0.276	0.537	9e-17
B2GUZ5	286	F-actin-capping protein s	yes	N/A	0.869	0.255	0.561	9e-17
Q2QLH5	286	F-actin-capping protein s	N/A	N/A	0.940	0.276	0.55	9e-17
Q2QL88	286	F-actin-capping protein s	N/A	N/A	0.940	0.276	0.55	9e-17
P52907	286	F-actin-capping protein s	yes	N/A	0.869	0.255	0.547	1e-16
Q5NVM0	286	F-actin-capping protein s	yes	N/A	0.869	0.255	0.547	1e-16

>sp|Q9W2N0|CAPZA_DROME F-actin-capping protein subunit alpha OS=Drosophila melanogaster GN=cpa PE=2 SV=1

 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 57/69 (82%)

Query: 15  VEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAISE 74
            E+KG LKVQVHYYEDGNVQLVSSK+ +E+VVV++E+Q A+E+++LIE++E  YQ AISE
Sbjct: 186 AELKGVLKVQVHYYEDGNVQLVSSKECRESVVVSNEQQVAKEVIRLIEDAENEYQLAISE 245

Query: 75  NYMIIRKTC 83
           NY  +  T 
Sbjct: 246 NYQTMSDTT 254

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
Drosophila melanogaster (taxid: 7227)

>sp|P25229|CAZA1_XENLA F-actin-capping protein subunit alpha-1 (Fragment) OS=Xenopus laevis GN=capza1 PE=1 SV=1

 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 41/73 (56%), Positives = 57/73 (78%)

Query: 10  IEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQ 69
           I G+  ++ G LK+QVHYYEDGNVQLVS KD++E++ ++ E QTA+E VK+IE++E+ YQ
Sbjct: 151 ISGSTAQLVGVLKIQVHYYEDGNVQLVSHKDVQESITISGEAQTAKEFVKIIEQAESDYQ 210

Query: 70  QAISENYMIIRKT 82
            AISENY  +  T
Sbjct: 211 TAISENYQTMSDT 223

Binds actin in a Ca(2+)-independent manner.

Xenopus laevis (taxid: 8355)

>sp|A4FUA8|CAZA1_BOVIN F-actin-capping protein subunit alpha-1 OS=Bos taurus GN=CAPZA1 PE=2 SV=1

 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 41/73 (56%), Positives = 54/73 (73%)

Query: 10  IEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQ 69
           I     +V G LK+QVHYYEDGNVQLVS KD++++V V++E QTA+E +K+IE +E  YQ
Sbjct: 181 ITPPTAQVVGVLKIQVHYYEDGNVQLVSHKDVQDSVTVSNEAQTAKEFIKIIEHAENEYQ 240

Query: 70  QAISENYMIIRKT 82
            AISENY  +  T
Sbjct: 241 TAISENYQTMSDT 253

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.

Bos taurus (taxid: 9913)

>sp|P28497|CAZA2_CHICK F-actin-capping protein subunit alpha-2 OS=Gallus gallus GN=CAPZA2 PE=1 SV=1

 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 43/81 (53%), Positives = 58/81 (71%), Gaps = 1/81 (1%)

Query: 4   RSLADF-IEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIE 62
           RS   F I  +  +V G LK+QVHYYEDGNVQLVS KDI++++ V++E QTA+E +K++E
Sbjct: 174 RSEWKFTISPSTTQVAGILKIQVHYYEDGNVQLVSHKDIQDSLTVSNEAQTAKEFIKIVE 233

Query: 63  ESETAYQQAISENYMIIRKTC 83
            +E  YQ AISENY  +  T 
Sbjct: 234 AAENEYQTAISENYQTMSDTT 254

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. CapZ may mediate the attachment of the barbed ends of actin filaments to the Z-line.

Gallus gallus (taxid: 9031)

>sp|Q00PJ7|CAZA2_ATEAB F-actin-capping protein subunit alpha-2 OS=Atelerix albiventris GN=CAPZA2 PE=3 SV=1

 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 43/80 (53%), Positives = 59/80 (73%), Gaps = 1/80 (1%)

Query: 4   RSLADF-IEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIE 62
           RS   F I  ++ +V G LK+QVHYYEDGNVQLVS KDI++++ V++E QTA+E +K++E
Sbjct: 174 RSEWKFTISPSSTQVVGILKIQVHYYEDGNVQLVSHKDIQDSLTVSNEAQTAKEFIKIVE 233

Query: 63  ESETAYQQAISENYMIIRKT 82
            +E  YQ AISENY  +  T
Sbjct: 234 AAENEYQTAISENYQTMSDT 253

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.

Atelerix albiventris (taxid: 9368)

>sp|B2GUZ5|CAZA1_RAT F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus GN=Capza1 PE=1 SV=1

 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 41/73 (56%), Positives = 54/73 (73%)

Query: 10  IEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQ 69
           I     +V G LK+QVHYYEDGNVQLVS KD++++V V++E QTA+E +K+IE +E  YQ
Sbjct: 181 ITPPTAQVVGVLKIQVHYYEDGNVQLVSHKDVQDSVTVSNEVQTAKEFIKIIESAENEYQ 240

Query: 70  QAISENYMIIRKT 82
            AISENY  +  T
Sbjct: 241 TAISENYQTMSDT 253

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.

Rattus norvegicus (taxid: 10116)

>sp|Q2QLH5|CAZA2_OTOGA F-actin-capping protein subunit alpha-2 OS=Otolemur garnettii GN=CAPZA2 PE=3 SV=3

 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 58/80 (72%), Gaps = 1/80 (1%)

Query: 4   RSLADF-IEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIE 62
           RS   F I  +  +V G LK+QVHYYEDGNVQLVS KDI++++ V++E QTARE +K++E
Sbjct: 174 RSEWKFTITPSTTQVVGILKIQVHYYEDGNVQLVSHKDIQDSLTVSNEVQTAREFIKIVE 233

Query: 63  ESETAYQQAISENYMIIRKT 82
            +E  YQ AISENY  +  T
Sbjct: 234 AAENEYQTAISENYQTMSDT 253

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.

Otolemur garnettii (taxid: 30611)

>sp|Q2QL88|CAZA2_MICMU F-actin-capping protein subunit alpha-2 OS=Microcebus murinus GN=CAPZA2 PE=3 SV=3

 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 58/80 (72%), Gaps = 1/80 (1%)

Query: 4   RSLADF-IEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIE 62
           RS   F I  +  +V G LK+QVHYYEDGNVQLVS KDI++++ V++E QTARE +K++E
Sbjct: 174 RSEWKFTITPSTTQVVGILKIQVHYYEDGNVQLVSHKDIQDSLTVSNEVQTAREFIKIVE 233

Query: 63  ESETAYQQAISENYMIIRKT 82
            +E  YQ AISENY  +  T
Sbjct: 234 AAENEYQTAISENYQTMSDT 253

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.

Microcebus murinus (taxid: 30608)

>sp|P52907|CAZA1_HUMAN F-actin-capping protein subunit alpha-1 OS=Homo sapiens GN=CAPZA1 PE=1 SV=3

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/73 (54%), Positives = 54/73 (73%)

Query: 10  IEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQ 69
           I     +V G LK+QVHYYEDGNVQLVS KD+++++ V++E QTA+E +K+IE +E  YQ
Sbjct: 181 ITPPTAQVVGVLKIQVHYYEDGNVQLVSHKDVQDSLTVSNEAQTAKEFIKIIENAENEYQ 240

Query: 70  QAISENYMIIRKT 82
            AISENY  +  T
Sbjct: 241 TAISENYQTMSDT 253

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.

Homo sapiens (taxid: 9606)

>sp|Q5NVM0|CAZA1_PONAB F-actin-capping protein subunit alpha-1 OS=Pongo abelii GN=CAPZA1 PE=2 SV=3

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/73 (54%), Positives = 54/73 (73%)

Query: 10  IEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQ 69
           I     +V G LK+QVHYYEDGNVQLVS KD+++++ V++E QTA+E +K+IE +E  YQ
Sbjct: 181 ITPPTAQVVGVLKIQVHYYEDGNVQLVSHKDVQDSLTVSNEAQTAKEFIKIIENAENEYQ 240

Query: 70  QAISENYMIIRKT 82
            AISENY  +  T
Sbjct: 241 TAISENYQTMSDT 253

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.

Pongo abelii (taxid: 9601)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	84
66508517	288	PREDICTED: f-actin-capping protein subun	0.833	0.243	0.628	3e-19
58388326	289	AGAP006141-PB [Anopheles gambiae str. PE	0.845	0.245	0.647	5e-19
340713972	288	PREDICTED: f-actin-capping protein subun	0.833	0.243	0.614	9e-19
350418891	288	PREDICTED: F-actin-capping protein subun	0.833	0.243	0.614	9e-19
383849439	288	PREDICTED: F-actin-capping protein subun	0.833	0.243	0.614	9e-19
322795636	289	hypothetical protein SINV_02451 [Solenop	0.833	0.242	0.6	1e-18
332020162	275	F-actin-capping protein subunit alpha [A	0.821	0.250	0.608	1e-18
156543923	289	PREDICTED: F-actin-capping protein subun	0.809	0.235	0.632	2e-18
157137321	289	f-actin capping protein alpha [Aedes aeg	0.845	0.245	0.633	4e-18
307168127	289	F-actin-capping protein subunit alpha [C	0.833	0.242	0.585	5e-18

>gi|66508517|ref|XP_624862.1| PREDICTED: f-actin-capping protein subunit alpha-like isoform 2 [Apis mellifera] gi|328781655|ref|XP_003250011.1| PREDICTED: f-actin-capping protein subunit alpha-like isoform 1 [Apis mellifera] gi|380025038|ref|XP_003696288.1| PREDICTED: F-actin-capping protein subunit alpha-like [Apis florea]

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 44/70 (62%), Positives = 60/70 (85%)

Query: 14  NVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAIS 73
           N E++G+LKVQVHYYEDGNVQLVSSK++KE++ ++SE+QTA+E+++L+EESE  YQ AIS
Sbjct: 187 NAELRGSLKVQVHYYEDGNVQLVSSKEVKESLPISSEKQTAKELIRLVEESENDYQTAIS 246

Query: 74  ENYMIIRKTC 83
           ENY  +  T 
Sbjct: 247 ENYQTMSDTT 256

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|58388326|ref|XP_316203.2| AGAP006141-PB [Anopheles gambiae str. PEST] gi|158295417|ref|XP_001688794.1| AGAP006141-PA [Anopheles gambiae str. PEST] gi|55238958|gb|EAA10831.2| AGAP006141-PB [Anopheles gambiae str. PEST] gi|157016028|gb|EDO63800.1| AGAP006141-PA [Anopheles gambiae str. PEST]

 Score = 98.2 bits (243), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/71 (64%), Positives = 57/71 (80%)

Query: 12  GNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQA 71
           G   E+KG+LK+QVHYYEDGNVQLVS+KD +ETV +T+E  TA+EI++LIEESE  YQ A
Sbjct: 186 GGTAELKGSLKLQVHYYEDGNVQLVSAKDCRETVPITNEANTAKEIIRLIEESEHDYQTA 245

Query: 72  ISENYMIIRKT 82
           ISENY  +  T
Sbjct: 246 ISENYQTMSDT 256

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340713972|ref|XP_003395507.1| PREDICTED: f-actin-capping protein subunit alpha-like [Bombus terrestris]

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 43/70 (61%), Positives = 60/70 (85%)

Query: 14  NVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAIS 73
           N E++G+LKVQVHYYEDGNVQLVSSK++KE++ +++E+QTA+E+++L+EESE  YQ AIS
Sbjct: 187 NAELRGSLKVQVHYYEDGNVQLVSSKEVKESLPISNEKQTAKELIRLVEESENDYQTAIS 246

Query: 74  ENYMIIRKTC 83
           ENY  +  T 
Sbjct: 247 ENYQTMSDTT 256

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350418891|ref|XP_003492002.1| PREDICTED: F-actin-capping protein subunit alpha-like [Bombus impatiens]

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 43/70 (61%), Positives = 60/70 (85%)

Query: 14  NVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAIS 73
           N E++G+LKVQVHYYEDGNVQLVSSK++KE++ +++E+QTA+E+++L+EESE  YQ AIS
Sbjct: 187 NAELRGSLKVQVHYYEDGNVQLVSSKEVKESLPISNEKQTAKELIRLVEESENDYQTAIS 246

Query: 74  ENYMIIRKTC 83
           ENY  +  T 
Sbjct: 247 ENYQTMSDTT 256

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383849439|ref|XP_003700352.1| PREDICTED: F-actin-capping protein subunit alpha-like [Megachile rotundata]

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 43/70 (61%), Positives = 60/70 (85%)

Query: 14  NVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAIS 73
           N E++G+LKVQVHYYEDGNVQLVSSK++KE++ +++E+QTA+E+++L+EESE  YQ AIS
Sbjct: 187 NAELRGSLKVQVHYYEDGNVQLVSSKEVKESLPISNEKQTAKELIRLVEESENDYQTAIS 246

Query: 74  ENYMIIRKTC 83
           ENY  +  T 
Sbjct: 247 ENYQTMSDTT 256

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322795636|gb|EFZ18315.1| hypothetical protein SINV_02451 [Solenopsis invicta]

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 42/70 (60%), Positives = 59/70 (84%)

Query: 14  NVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAIS 73
           N E++G+LKVQVHYYEDGNVQLVSSKD+KE++ +++E+QTA+++++ +EESE  YQ AIS
Sbjct: 188 NAELRGSLKVQVHYYEDGNVQLVSSKDVKESLPISNEKQTAKDLIRFVEESENDYQTAIS 247

Query: 74  ENYMIIRKTC 83
           ENY  +  T 
Sbjct: 248 ENYQTMSDTT 257

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020162|gb|EGI60606.1| F-actin-capping protein subunit alpha [Acromyrmex echinatior]

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 59/69 (85%)

Query: 14  NVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAIS 73
           N E++G+LKVQVHYYEDGNVQLVSSKD+KE++ +++E+QTA+++++ +EESE  YQ AIS
Sbjct: 174 NAELRGSLKVQVHYYEDGNVQLVSSKDVKESLPISNEKQTAKDLIRFVEESENDYQTAIS 233

Query: 74  ENYMIIRKT 82
           ENY  +  T
Sbjct: 234 ENYQTMSDT 242

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156543923|ref|XP_001607161.1| PREDICTED: F-actin-capping protein subunit alpha-like [Nasonia vitripennis]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/68 (63%), Positives = 59/68 (86%)

Query: 15  VEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAISE 74
            E+KG+LKVQVHYYEDGNVQLVSSK++KE++ ++SE+QTA+E+++L++ESE  YQ AISE
Sbjct: 189 AELKGSLKVQVHYYEDGNVQLVSSKEVKESLPISSEKQTAKELIRLVQESENDYQTAISE 248

Query: 75  NYMIIRKT 82
           NY  +  T
Sbjct: 249 NYQTMSDT 256

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157137321|ref|XP_001657019.1| f-actin capping protein alpha [Aedes aegypti] gi|108869739|gb|EAT33964.1| AAEL013778-PA [Aedes aegypti]

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/71 (63%), Positives = 57/71 (80%)

Query: 12  GNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQA 71
           G   E+KG LK+QVHYYEDGNVQLVSSK+ +E+VV+T+E  TA+EI++L+EESE  YQ A
Sbjct: 186 GGTAELKGMLKLQVHYYEDGNVQLVSSKEFRESVVITNEAATAKEILRLVEESEHDYQTA 245

Query: 72  ISENYMIIRKT 82
           ISENY  +  T
Sbjct: 246 ISENYQTMSDT 256

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307168127|gb|EFN61406.1| F-actin-capping protein subunit alpha [Camponotus floridanus]

 Score = 95.1 bits (235), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 41/70 (58%), Positives = 59/70 (84%)

Query: 14  NVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAIS 73
           N E++G+LKVQVHYYEDGNVQLVSSK++KE++ +++E+QTA+++++ +EESE  YQ AIS
Sbjct: 188 NAELRGSLKVQVHYYEDGNVQLVSSKEVKESLPISNEKQTAKDLIRFVEESENDYQTAIS 247

Query: 74  ENYMIIRKTC 83
           ENY  +  T 
Sbjct: 248 ENYQTMSDTT 257

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	84
FB|FBgn0034577	286	cpa "capping protein alpha" [D	0.797	0.234	0.641	5.1e-19
UNIPROTKB|P25229	256	capza1 "F-actin-capping protei	0.869	0.285	0.561	1.1e-18
ZFIN|ZDB-GENE-031002-24	286	capza1b "capping protein (acti	0.869	0.255	0.575	4.6e-18
UNIPROTKB|F1NFP1	286	CAPZA2 "F-actin-capping protei	0.869	0.255	0.547	1.6e-17
UNIPROTKB|P28497	286	CAPZA2 "F-actin-capping protei	0.869	0.255	0.547	1.6e-17
UNIPROTKB|A4FUA8	286	CAPZA1 "F-actin-capping protei	0.797	0.234	0.597	1.6e-17
UNIPROTKB|F6Q4Y6	214	CAPZA1 "Uncharacterized protei	0.797	0.313	0.597	1.6e-17
UNIPROTKB|F1P7P3	291	CAPZA1 "Uncharacterized protei	0.797	0.230	0.597	2e-17
RGD|1587438	286	Capza1 "capping protein (actin	0.797	0.234	0.597	2e-17
UNIPROTKB|F8WFI5	289	Capza1 "F-actin-capping protei	0.797	0.231	0.597	2e-17

FB|FBgn0034577 cpa "capping protein alpha" [Drosophila melanogaster (taxid:7227)]

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 43/67 (64%), Positives = 57/67 (85%)

Query:    16 EVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAISEN 75
             E+KG LKVQVHYYEDGNVQLVSSK+ +E+VVV++E+Q A+E+++LIE++E  YQ AISEN
Sbjct:   187 ELKGVLKVQVHYYEDGNVQLVSSKECRESVVVSNEQQVAKEVIRLIEDAENEYQLAISEN 246

Query:    76 YMIIRKT 82
             Y  +  T
Sbjct:   247 YQTMSDT 253

GO:0051016 "barbed-end actin filament capping" evidence=ISS;NAS

GO:0008290 "F-actin capping protein complex" evidence=IEA;NAS

GO:0030036 "actin cytoskeleton organization" evidence=IMP;NAS

GO:0005869 "dynactin complex" evidence=ISS

GO:0007018 "microtubule-based movement" evidence=ISS

GO:0007015 "actin filament organization" evidence=IMP

GO:0003779 "actin binding" evidence=IEA

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0010591 "regulation of lamellipodium assembly" evidence=IMP

GO:0030837 "negative regulation of actin filament polymerization" evidence=IMP

GO:0035220 "wing disc development" evidence=IMP

GO:0016324 "apical plasma membrane" evidence=IDA

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0007294 "germarium-derived oocyte fate determination" evidence=IMP

GO:0000902 "cell morphogenesis" evidence=IMP

GO:0051490 "negative regulation of filopodium assembly" evidence=IMP

UNIPROTKB|P25229 capza1 "F-actin-capping protein subunit alpha-1" [Xenopus laevis (taxid:8355)]

 Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 41/73 (56%), Positives = 57/73 (78%)

Query:    10 IEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQ 69
             I G+  ++ G LK+QVHYYEDGNVQLVS KD++E++ ++ E QTA+E VK+IE++E+ YQ
Sbjct:   151 ISGSTAQLVGVLKIQVHYYEDGNVQLVSHKDVQESITISGEAQTAKEFVKIIEQAESDYQ 210

Query:    70 QAISENYMIIRKT 82
              AISENY  +  T
Sbjct:   211 TAISENYQTMSDT 223

GO:0071203 "WASH complex" evidence=ISS

ZFIN|ZDB-GENE-031002-24 capza1b "capping protein (actin filament) muscle Z-line, alpha 1b" [Danio rerio (taxid:7955)]

 Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 42/73 (57%), Positives = 56/73 (76%)

Query:    10 IEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQ 69
             I  ++ +V G LK+QVHYYEDGNVQLVS K+++E++VVT+E QTA+E  K+IE +E  YQ
Sbjct:   181 ISQSSAQVVGVLKIQVHYYEDGNVQLVSHKEVEESIVVTNEVQTAKEFAKIIENAENDYQ 240

Query:    70 QAISENYMIIRKT 82
              AISENY  +  T
Sbjct:   241 TAISENYQTMSDT 253

GO:0003779 "actin binding" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

UNIPROTKB|F1NFP1 CAPZA2 "F-actin-capping protein subunit alpha-2" [Gallus gallus (taxid:9031)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 40/73 (54%), Positives = 55/73 (75%)

Query:    10 IEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQ 69
             I  +  +V G LK+QVHYYEDGNVQLVS KDI++++ V++E QTA+E +K++E +E  YQ
Sbjct:   181 ISPSTTQVAGILKIQVHYYEDGNVQLVSHKDIQDSLTVSNEAQTAKEFIKIVEAAENEYQ 240

Query:    70 QAISENYMIIRKT 82
              AISENY  +  T
Sbjct:   241 TAISENYQTMSDT 253

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|P28497 CAPZA2 "F-actin-capping protein subunit alpha-2" [Gallus gallus (taxid:9031)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 40/73 (54%), Positives = 55/73 (75%)

Query:    10 IEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQ 69
             I  +  +V G LK+QVHYYEDGNVQLVS KDI++++ V++E QTA+E +K++E +E  YQ
Sbjct:   181 ISPSTTQVAGILKIQVHYYEDGNVQLVSHKDIQDSLTVSNEAQTAKEFIKIVEAAENEYQ 240

Query:    70 QAISENYMIIRKT 82
              AISENY  +  T
Sbjct:   241 TAISENYQTMSDT 253

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0051693 "actin filament capping" evidence=IEA

GO:0030018 "Z disc" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0030863 "cortical cytoskeleton" evidence=IEA

GO:0005829 "cytosol" evidence=TAS

UNIPROTKB|A4FUA8 CAPZA1 "F-actin-capping protein subunit alpha-1" [Bos taurus (taxid:9913)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 40/67 (59%), Positives = 53/67 (79%)

Query:    16 EVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAISEN 75
             +V G LK+QVHYYEDGNVQLVS KD++++V V++E QTA+E +K+IE +E  YQ AISEN
Sbjct:   187 QVVGVLKIQVHYYEDGNVQLVSHKDVQDSVTVSNEAQTAKEFIKIIEHAENEYQTAISEN 246

Query:    76 YMIIRKT 82
             Y  +  T
Sbjct:   247 YQTMSDT 253

GO:0071203 "WASH complex" evidence=ISS

GO:0051693 "actin filament capping" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

UNIPROTKB|F6Q4Y6 CAPZA1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 40/67 (59%), Positives = 53/67 (79%)

Query:    16 EVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAISEN 75
             +V G LK+QVHYYEDGNVQLVS KD++++V V++E QTA+E +K+IE +E  YQ AISEN
Sbjct:   115 QVVGVLKIQVHYYEDGNVQLVSHKDVQDSVTVSNEAQTAKEFIKIIEHAENEYQTAISEN 174

Query:    76 YMIIRKT 82
             Y  +  T
Sbjct:   175 YQTMSDT 181

GO:0071203 "WASH complex" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

UNIPROTKB|F1P7P3 CAPZA1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 40/67 (59%), Positives = 53/67 (79%)

Query:    16 EVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAISEN 75
             +V G LK+QVHYYEDGNVQLVS KD++++V V++E QTA+E +K+IE +E  YQ AISEN
Sbjct:   192 QVVGVLKIQVHYYEDGNVQLVSHKDVQDSVTVSNEVQTAKEFIKIIEHAENEYQTAISEN 251

Query:    76 YMIIRKT 82
             Y  +  T
Sbjct:   252 YQTMSDT 258

GO:0071203 "WASH complex" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

RGD|1587438 Capza1 "capping protein (actin filament) muscle Z-line, alpha 1" [Rattus norvegicus (taxid:10116)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 40/67 (59%), Positives = 53/67 (79%)

Query:    16 EVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAISEN 75
             +V G LK+QVHYYEDGNVQLVS KD++++V V++E QTA+E +K+IE +E  YQ AISEN
Sbjct:   187 QVVGVLKIQVHYYEDGNVQLVSHKDVQDSVTVSNEVQTAKEFIKIIESAENEYQTAISEN 246

Query:    76 YMIIRKT 82
             Y  +  T
Sbjct:   247 YQTMSDT 253

GO:0003779 "actin binding" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA;ISO

GO:0016020 "membrane" evidence=IEA;ISO

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0030863 "cortical cytoskeleton" evidence=IEA;ISO

GO:0051016 "barbed-end actin filament capping" evidence=ISO

GO:0051693 "actin filament capping" evidence=IEA

GO:0071203 "WASH complex" evidence=ISO;ISS

GO:0051015 "actin filament binding" evidence=ISO

UNIPROTKB|F8WFI5 Capza1 "F-actin-capping protein subunit alpha-1" [Rattus norvegicus (taxid:10116)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 40/67 (59%), Positives = 53/67 (79%)

Query:    16 EVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAISEN 75
             +V G LK+QVHYYEDGNVQLVS KD++++V V++E QTA+E +K+IE +E  YQ AISEN
Sbjct:   187 QVVGVLKIQVHYYEDGNVQLVSHKDVQDSVTVSNEVQTAKEFIKIIESAENEYQTAISEN 246

Query:    76 YMIIRKT 82
             Y  +  T
Sbjct:   247 YQTMSDT 253

GO:0003779 "actin binding" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P47753	CAZA1_MOUSE	No assigned EC number	0.5479	0.8690	0.2552	yes	N/A
P28497	CAZA2_CHICK	No assigned EC number	0.5308	0.9523	0.2797	yes	N/A
Q9W2N0	CAPZA_DROME	No assigned EC number	0.6231	0.8214	0.2412	yes	N/A
P52907	CAZA1_HUMAN	No assigned EC number	0.5479	0.8690	0.2552	yes	N/A
Q5NVM0	CAZA1_PONAB	No assigned EC number	0.5479	0.8690	0.2552	yes	N/A
A4FUA8	CAZA1_BOVIN	No assigned EC number	0.5616	0.8690	0.2552	yes	N/A
B2GUZ5	CAZA1_RAT	No assigned EC number	0.5616	0.8690	0.2552	yes	N/A
Q2QLA8	CAZA2_HORSE	No assigned EC number	0.5375	0.9404	0.2762	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	84
pfam01267	269	pfam01267, F-actin_cap_A, F-actin capping protein	5e-24

>gnl|CDD|216401 pfam01267, F-actin_cap_A, F-actin capping protein alpha subunit

 Score = 90.8 bits (226), Expect = 5e-24
 Identities = 38/73 (52%), Positives = 50/73 (68%)

Query: 4   RSLADFIEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEE 63
           RS       +   +KG +KV VHYYEDGNVQL SSKD +ETV V++++ TA  IVK I E
Sbjct: 162 RSEWTLDSSSTGSLKGKIKVDVHYYEDGNVQLKSSKDFEETVSVSNDDATASSIVKAIRE 221

Query: 64  SETAYQQAISENY 76
           +E  YQ A++EN+
Sbjct: 222 AENEYQAALNENF 234

Length = 269

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	84
PF01267	271	F-actin_cap_A: F-actin capping protein alpha subun	99.97
KOG0836|consensus	282		99.97

>PF01267 F-actin_cap_A: F-actin capping protein alpha subunit; InterPro: IPR002189 This entry represents a component of the WASH complex

Probab=99.97  E-value=3e-31  Score=197.48  Aligned_cols=81  Identities=44%  Similarity=0.677  Sum_probs=73.9

Q ss_pred             cccceeEee--CCCceEEEEEEEeeEeeecccEEEEeccceecceeecCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy13237          3 DRSLADFIE--GNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAISENYMIIR   80 (84)
Q Consensus         3 ~~w~~~~~~--~~~~~l~G~I~V~vHYyEdGNVqL~s~k~~~~~~~~s~~~~~A~~iv~~I~~~E~~~q~~L~e~y~~Ls   80 (84)
                      |||||.|.-  ..+.+|+|+|+|+|||||||||||+++|++..++.++++.++|++||++|+++|++||++|+++|++||
T Consensus       161 G~WrS~w~~~~~~~~~l~G~I~V~vHYyEdGNVqL~~~k~~~~~~~~~~~~~~a~~iv~~I~~~E~~~q~~L~e~~~~ls  240 (271)
T PF01267_consen  161 GRWRSEWTVDFSSSGTLSGKIKVQVHYYEDGNVQLNSSKEVSETVSVSNDEQFASDIVKAIKEAENKYQTSLNESYNNLS  240 (271)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEEEEEE-TTEEEEEEEEEEEEEEEE--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeeEEEEEecCCCceEEEEEEeeEEEEeecEEEEEEccccceeeccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999994  356799999999999999999999999999999998888899999999999999999999999999999


Q ss_pred             ccC
Q psy13237         81 KTC   83 (84)
Q Consensus        81 e~t   83 (84)
                      ++|
T Consensus       241 ~~t  243 (271)
T PF01267_consen  241 EKT  243 (271)
T ss_dssp             HTH
T ss_pred             HHH
Confidence            975

The WASH complex is present at the surface of endosomes and recruits and activates the Arp2/3 complex to induce actin polymerisation. The WASH complex plays a key role in the fission of tubules that serve as transport intermediates during endosome sorting []. The WASH complex's subunit structure: F-actin-capping protein subunit alpha (CAPZA1, CAPZA2 or CAPZA3), F-actin-capping protein subunit beta (CAPZB), WASH (WASH1, WASH2P, WASH3P, WASH4P, WASH5P or WASH6P), FAM21 (FAM21A, FAM21B or FAM21C), KIAA1033, KIAA0196 (strumpellin) and CCDC53. The actin filament system, a prominent part of the cytoskeleton in eukaryotic cells, is both a static structure and a dynamic network that can undergo rearrangements: it is thought to be involved in processes such as cell movement and phagocytosis [], as well as muscle contraction. The F-actin capping protein binds in a calcium-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike gelsolin and severin this protein does not sever actin filaments. The F-actin capping protein is a heterodimer composed of two unrelated subunits: alpha and beta (see IPR001698 from INTERPRO). Neither of the subunits shows sequence similarity to other filament-capping proteins []. The alpha subunit is a protein of about 268 to 286 amino acid residues whose sequence is well conserved in eukaryotic species [].; GO: 0003779 actin binding, 0030036 actin cytoskeleton organization, 0008290 F-actin capping protein complex; PDB: 1MQ1_D 1MWN_X 2KBM_Y 2KZ7_A 3AAE_C 3AA6_A 3LK4_G 1IZN_A 3AA7_A 3AAA_A ....

>KOG0836|consensus

Probab=99.97  E-value=1.7e-30  Score=193.64  Aligned_cols=82  Identities=54%  Similarity=0.786  Sum_probs=77.5

Q ss_pred             CcccceeEeeC-C-CceEEEEEEEeeEeeecccEEEEeccceecceeecCchhhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy13237          2 FDRSLADFIEG-N-NVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAISENYMII   79 (84)
Q Consensus         2 ~~~w~~~~~~~-~-~~~l~G~I~V~vHYyEdGNVqL~s~k~~~~~~~~s~~~~~A~~iv~~I~~~E~~~q~~L~e~y~~L   79 (84)
                      -|||||.|.-+ . ..+|+|.|+|||||||||||||.++|++.+++.+++..++|++++++|+++||+||++|+++|++|
T Consensus       167 NG~WRS~w~~~v~~~~~l~G~i~vqvHYyEdGNV~l~s~Kd~qds~~vsn~~q~a~e~~~iI~~~Eneyq~ai~e~yq~l  246 (282)
T KOG0836|consen  167 NGRWRSEWNYDVQPTTELKGRIKVQVHYYEDGNVQLVSSKDIQDSLTVSNEVQTAKEFIKIIEEAENEYQAAISENYQTL  246 (282)
T ss_pred             CCceeeeeeeccCchheeeeEEEEEEEEEecCcEEEEecCcchhhheeechHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            49999999932 2 589999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccC
Q psy13237         80 RKTC   83 (84)
Q Consensus        80 se~t   83 (84)
                      ||+|
T Consensus       247 sD~t  250 (282)
T KOG0836|consen  247 SDTT  250 (282)
T ss_pred             ChhH
Confidence            9986

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	84
1izn_A	286	Crystal Structure Of Actin Filament Capping Protein		2e-17
2kxp_A	275	Solution Nmr Structure Of V-1 Bound To Capping Prot		2e-17
4akr_A	281	Crystal Structure Of The Cytoplasmic Actin Capping		7e-05

>pdb|1IZN|A Chain A, Crystal Structure Of Actin Filament Capping Protein Capz Length = 286

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 10  IEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQ 69
           I     +V   LK+QVHYYEDGNVQLVS KDI+++V V+S+ QTA+E +K+IE +E  YQ
Sbjct: 181 ITPPTAQVAAVLKIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQ 240
Query: 70  QAISENYMIIRKT 82
            AISENY  +  T
Sbjct: 241 TAISENYQTMSDT 253

>pdb|2KXP|A Chain A, Solution Nmr Structure Of V-1 Bound To Capping Protein (Cp) Length = 275

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 10  IEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQ 69
           I     +V   LK+QVHYYEDGNVQLVS KDI+++V V+S+ QTA+E +K+IE +E  YQ
Sbjct: 175 ITPPTAQVAAVLKIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQ 234
Query: 70  QAISENYMIIRKT 82
            AISENY  +  T
Sbjct: 235 TAISENYQTMSDT 247

>pdb|4AKR|A Chain A, Crystal Structure Of The Cytoplasmic Actin Capping Protein Cap32_34 From Dictyostelium Discoideum Length = 281

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 34/69 (49%)
Query: 14  NVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAIS 73
           NV   G ++V VHY+EDGNVQL +    + T      + TA    K I ++E     A+ 
Sbjct: 181 NVTSNGKVQVNVHYFEDGNVQLNTVTQKQTTSPSADAQSTAVNAFKAIGKAELNLHTALD 240
Query: 74  ENYMIIRKT 82
            NY  +  T
Sbjct: 241 NNYSTMGDT 249

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	84
3aa0_A	286	F-actin-capping protein subunit alpha-1; actin cap	3e-22
4akr_A	281	F-actin-capping protein subunit alpha; actin-bindi	2e-19
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-05

>3aa0_A F-actin-capping protein subunit alpha-1; actin capping protein, barbed END regulation, carmil family conformational change; 1.70A {Gallus gallus} PDB: 2kz7_A 1izn_A 3aa1_A* 3aa6_A 3aa7_A* 3aaa_A 3aae_A 3lk2_A 3lk3_A 3lk4_A 2kxp_A Length = 286

 Score = 85.9 bits (212), Expect = 3e-22
 Identities = 40/67 (59%), Positives = 51/67 (76%)

Query: 10  IEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQ 69
           I     +V   LK+QVHYYEDGNVQLVS KDI+++V V+S+ QTA+E +K+IE +E  YQ
Sbjct: 181 ITPPTAQVAAVLKIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQ 240

Query: 70  QAISENY 76
            AISENY
Sbjct: 241 TAISENY 247

>4akr_A F-actin-capping protein subunit alpha; actin-binding protein; 2.20A {Dictyostelium discoideum} Length = 281

 Score = 78.2 bits (192), Expect = 2e-19
 Identities = 24/69 (34%), Positives = 34/69 (49%)

Query: 14  NVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAIS 73
           NV   G ++V VHY+EDGNVQL +    + T      + TA    K I ++E     A+ 
Sbjct: 181 NVTSNGKVQVNVHYFEDGNVQLNTVTQKQTTSPSADAQSTAVNAFKAIGKAELNLHTALD 240

Query: 74  ENYMIIRKT 82
            NY  +  T
Sbjct: 241 NNYSTMGDT 249

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 38.3 bits (88), Expect = 8e-05
 Identities = 10/74 (13%), Positives = 23/74 (31%), Gaps = 7/74 (9%)

Query: 8  DFIEGNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEES-ET 66
          D +         N   +    +D    ++S ++I   ++          +   +    E 
Sbjct: 20 DILSVFEDAFVDNFDCK--DVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEE 77

Query: 67 AYQQAISE----NY 76
            Q+ + E    NY
Sbjct: 78 MVQKFVEEVLRINY 91

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	84
4akr_A	281	F-actin-capping protein subunit alpha; actin-bindi	99.97
3aa0_A	286	F-actin-capping protein subunit alpha-1; actin cap	99.93

>4akr_A F-actin-capping protein subunit alpha; actin-binding protein; 2.20A {Dictyostelium discoideum}

Probab=99.97  E-value=9.9e-32  Score=200.24  Aligned_cols=81  Identities=30%  Similarity=0.418  Sum_probs=77.2

Q ss_pred             cccceeEe-e--CCCceEE--EEEEEeeEeeecccEEEEeccceecceeecCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy13237          3 DRSLADFI-E--GNNVEVK--GNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAISENYM   77 (84)
Q Consensus         3 ~~w~~~~~-~--~~~~~l~--G~I~V~vHYyEdGNVqL~s~k~~~~~~~~s~~~~~A~~iv~~I~~~E~~~q~~L~e~y~   77 (84)
                      |||||.|. +  +.+.+|+  |+|+|||||||||||||+++|+++.+++++++.++|++||++|+++|++||.+|+++|+
T Consensus       165 GrWrS~w~~~~~~~~~~l~~~G~I~V~vHYyEDGNVqL~s~k~~~~s~~~~~~~~~a~~iv~~I~~~E~~~q~~l~~~~~  244 (281)
T 4akr_A          165 GRWRSVWTCTFKPGSGNVTSNGKVQVNVHYFEDGNVQLNTVTQKQTTSPSADAQSTAVNAFKAIGKAELNLHTALDNNYS  244 (281)
T ss_dssp             EEEEEEEEEEECTTSSEEEEEEEEEEEEEECSSEEEEEEEEEEEEEEEECCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEEEEecCCCCeEEECCEEEEEEEEeecceEEEEeccccccccccCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999 3  5678888  99999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhccC
Q psy13237         78 IIRKTC   83 (84)
Q Consensus        78 ~Lse~t   83 (84)
                      +||++|
T Consensus       245 ~ls~~t  250 (281)
T 4akr_A          245 TMGDTT  250 (281)
T ss_dssp             HHHHTT
T ss_pred             HhCHHH
Confidence            999976

>3aa0_A F-actin-capping protein subunit alpha-1; actin capping protein, barbed END regulation, carmil family conformational change; 1.70A {Gallus gallus} PDB: 2kz7_A 1izn_A 3aa1_A* 3aa6_A 3aa7_A* 3aaa_A 3aae_A 3lk2_A 3lk3_A 3lk4_A 2kxp_A

Probab=99.93  E-value=6.8e-26  Score=168.55  Aligned_cols=82  Identities=50%  Similarity=0.721  Sum_probs=75.8

Q ss_pred             CcccceeEe-e--CCCceEEEEEEEeeEeeecccEEEEeccceecceeecCchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy13237          2 FDRSLADFI-E--GNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAISENYMI   78 (84)
Q Consensus         2 ~~~w~~~~~-~--~~~~~l~G~I~V~vHYyEdGNVqL~s~k~~~~~~~~s~~~~~A~~iv~~I~~~E~~~q~~L~e~y~~   78 (84)
                      -|||+|.|+ +  +.+.+|+|+|+|+|||||||||||.++|+++.+++++++.+.|++|++.|+++|++||.+|++.|.+
T Consensus       170 ~G~W~Si~~~~v~~~~~~l~G~i~v~vHY~EdGNV~L~~~k~~~~~~~~~~~~~~a~~i~~~Ie~~E~~~~~~L~e~y~~  249 (286)
T 3aa0_A          170 NGRWRSEWKFTITPPTAQVAAVLKIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQTAISENYQT  249 (286)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEEEEEEEECTTEEEEEEEEEEEEEEEECCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceeeeEEEEEeccccceEEEEEEEEEEEecCceEEEeeccccccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            389999995 3  3358999999999999999999999999999999998888899999999999999999999999999


Q ss_pred             hhccC
Q psy13237         79 IRKTC   83 (84)
Q Consensus        79 Lse~t   83 (84)
                      |++++
T Consensus       250 ls~~~  254 (286)
T 3aa0_A          250 MSDTT  254 (286)
T ss_dssp             HHHTH
T ss_pred             hhHHH
Confidence            99864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	84
d1izna_	275	e.43.1.1 (A:) Capz alpha-1 subunit {Chicken (Gallu	1e-22

>d1izna_ e.43.1.1 (A:) Capz alpha-1 subunit {Chicken (Gallus gallus) [TaxId: 9031]} Length = 275

class: Multi-domain proteins (alpha and beta)
fold: Subunits of heterodimeric actin filament capping protein Capz
superfamily: Subunits of heterodimeric actin filament capping protein Capz
family: Capz alpha-1 subunit
domain: Capz alpha-1 subunit
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 85.6 bits (212), Expect = 1e-22
 Identities = 39/61 (63%), Positives = 50/61 (81%)

Query: 16  EVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAISEN 75
           +V   LK+QVHYYEDGNVQLVS KDI+++V V+S+ QTA+E +K+IE +E  YQ AISEN
Sbjct: 181 QVAAVLKIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQTAISEN 240

Query: 76  Y 76
           Y
Sbjct: 241 Y 241

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	84
d1izna_	275	Capz alpha-1 subunit {Chicken (Gallus gallus) [Tax	99.97

>d1izna_ e.43.1.1 (A:) Capz alpha-1 subunit {Chicken (Gallus gallus) [TaxId: 9031]}

class: Multi-domain proteins (alpha and beta)
fold: Subunits of heterodimeric actin filament capping protein Capz
superfamily: Subunits of heterodimeric actin filament capping protein Capz
family: Capz alpha-1 subunit
domain: Capz alpha-1 subunit
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.97  E-value=7.5e-32  Score=198.64  Aligned_cols=81  Identities=51%  Similarity=0.727  Sum_probs=76.5

Q ss_pred             cccceeEee---CCCceEEEEEEEeeEeeecccEEEEeccceecceeecCchhhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy13237          3 DRSLADFIE---GNNVEVKGNLKVQVHYYEDGNVQLVSSKDIKETVVVTSEEQTAREIVKLIEESETAYQQAISENYMII   79 (84)
Q Consensus         3 ~~w~~~~~~---~~~~~l~G~I~V~vHYyEdGNVqL~s~k~~~~~~~~s~~~~~A~~iv~~I~~~E~~~q~~L~e~y~~L   79 (84)
                      |||||.|.-   +.+.+|+|.|+|||||||||||||+++|++++++.++++.++|++||++|+++|++||.+|+++|++|
T Consensus       165 G~WrS~w~~~~~~~~~~l~G~i~v~vHYyEdGNVqL~s~k~~~~s~~~~~~~~~A~~iv~~I~~~E~~~q~~l~e~f~~l  244 (275)
T d1izna_         165 GRWRSEWKFTITPPTAQVAAVLKIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQTAISENYQTM  244 (275)
T ss_dssp             EEEEEEEEEECCSSEEEEEEEEEEEEEECSSEEEEEEEEEEEEEEEECCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeEEEEEEEccCCCcEEEEEEEEEEEEEecCeEEEEEccccccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999983   44678999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             hccC
Q psy13237         80 RKTC   83 (84)
Q Consensus        80 se~t   83 (84)
                      ||+|
T Consensus       245 s~~~  248 (275)
T d1izna_         245 SDTT  248 (275)
T ss_dssp             HHTH
T ss_pred             CHHH
Confidence            9975