Psyllid ID: psy13239


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180--
MKVLPVQVESSPFVERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIAKEGLSISANKEKMEALKTQYEPLLKWLSEKALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTGTLREG
cccHHHHHHccHHHHHHHHcccEEEEccccHHHHHHccccccccccccEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccEEEEEccccccHHHHHHHHHHccccccccHHHHHHccccEEEEccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccc
cccccHHHcccHHHHHHHHcccEEEEEEccHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccEcEEEEEcccccccEEEEEccccccHHHHHHHHHHHHHccccccHHHHHHHccEEEEccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccc
mkvlpvqvesspFVERLLRKGYEILYLIEAVdeytlsslpefegkkFQNIAKEGLSISANKEKMEALKTQYEPLLKWLSEKALKDQIAKAEIserlsdspcALVASMFGWTGNMERLAMSnahqkaddpqrkyylsqkktmevnprhplIRELYRRvkddpedaKATEIATMMFQTGTLREG
mkvlpvqvesspfvERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIAKEGLSISANKEKMEALKTQYEPLLKWLSEKALKDQIAKAeiserlsdspcALVASMFGWTGNMERLAMSnahqkaddpQRKYYLsqkktmevnprhplirELYRRVKDDPEDAKATEIATmmfqtgtlreg
MKVLPVQVESSPFVERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIAKEGLSISANKEKMEALKTQYEPLLKWLSEKALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTGTLREG
***********PFVERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIA***************LKTQYEPLLKWLSEKALKDQIAKAEI***LSDSPCALVASMFGWTGNM********************************************************************
***LPVQ*ESSPFVERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIAKEGL******************LLKWLSEKALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMS*****************KKTMEVNPRHPLIRELYR*******DAKATEIATMMFQTGTLRE*
MKVLPVQVESSPFVERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIAKEGLSISANKEKMEALKTQYEPLLKWLSEKALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTGTLREG
*KVLPVQVESSPFVERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIAKEGLSISANKEKMEALKTQYEPLLKWLSEKALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTGTLR**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MKVLPVQVESSPFVERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIAKEGLSISANKEKMEALKTQYEPLLKWLSEKALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTGTLREG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query182 2.2.26 [Sep-21-2011]
Q95M18804 Endoplasmin OS=Bos taurus yes N/A 0.967 0.218 0.564 1e-59
Q29092804 Endoplasmin OS=Sus scrofa yes N/A 0.967 0.218 0.564 2e-59
P41148804 Endoplasmin OS=Canis fami yes N/A 0.967 0.218 0.558 4e-59
Q5R6F7804 Endoplasmin OS=Pongo abel yes N/A 0.967 0.218 0.558 4e-59
P08712400 Endoplasmin (Fragment) OS N/A N/A 0.967 0.44 0.564 5e-59
P14625803 Endoplasmin OS=Homo sapie yes N/A 0.967 0.219 0.558 5e-59
Q4R520804 Endoplasmin OS=Macaca fas N/A N/A 0.967 0.218 0.558 6e-59
Q66HD0804 Endoplasmin OS=Rattus nor yes N/A 0.967 0.218 0.564 6e-59
P08113802 Endoplasmin OS=Mus muscul yes N/A 0.967 0.219 0.558 1e-58
P08110795 Endoplasmin OS=Gallus gal yes N/A 0.967 0.221 0.558 1e-58
>sp|Q95M18|ENPL_BOVIN Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1 Back     alignment and function desciption
 Score =  228 bits (582), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 101/179 (56%), Positives = 139/179 (77%), Gaps = 3/179 (1%)

Query: 7   QVESSPFVERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIAKEGLSIS---ANKEK 63
           + ESSPFVERLL+KGYE++YL E VDEY + +LPEF+GK+FQN+AKEG+       +KE 
Sbjct: 548 EAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKSKES 607

Query: 64  MEALKTQYEPLLKWLSEKALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAH 123
            EA++ ++EPLL W+ +KALKD+I KA +S+RL++SPCALVAS +GW+GNMER+  + A+
Sbjct: 608 REAVEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAY 667

Query: 124 QKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTGTLREG 182
           Q   D    YY SQKKT E+NPRHPLIR++ RRVK+D +D   +++A ++F+T TLR G
Sbjct: 668 QTGKDISTNYYASQKKTFEINPRHPLIRDMLRRVKEDEDDKTVSDLAVVLFETATLRSG 726




Molecular chaperone that functions in the processing and transport of secreted proteins. Functions in endoplasmic reticulum associated degradation (ERAD). Has ATPase activity.
Bos taurus (taxid: 9913)
>sp|Q29092|ENPL_PIG Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3 Back     alignment and function description
>sp|P41148|ENPL_CANFA Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV=1 Back     alignment and function description
>sp|Q5R6F7|ENPL_PONAB Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1 Back     alignment and function description
>sp|P08712|ENPL_MESAU Endoplasmin (Fragment) OS=Mesocricetus auratus GN=HSP90B1 PE=1 SV=1 Back     alignment and function description
>sp|P14625|ENPL_HUMAN Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1 Back     alignment and function description
>sp|Q4R520|ENPL_MACFA Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2 SV=1 Back     alignment and function description
>sp|Q66HD0|ENPL_RAT Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2 Back     alignment and function description
>sp|P08113|ENPL_MOUSE Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2 Back     alignment and function description
>sp|P08110|ENPL_CHICK Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query182
193643557 784 PREDICTED: endoplasmin-like [Acyrthosiph 0.967 0.224 0.721 2e-76
326532784 783 predicted protein [Hordeum vulgare subsp 0.967 0.224 0.715 4e-76
91089871 782 PREDICTED: similar to Glycoprotein 93 CG 0.967 0.225 0.715 3e-75
241997148 790 endoplasmin [Locusta migratoria] 0.967 0.222 0.726 6e-75
195108998 790 GI24315 [Drosophila mojavensis] gi|19391 0.967 0.222 0.720 9e-74
195037341 794 GH18412 [Drosophila grimshawi] gi|193894 0.967 0.221 0.720 2e-73
332376398 781 unknown [Dendroctonus ponderosae] 0.967 0.225 0.698 3e-72
170032518 794 endoplasmin [Culex quinquefasciatus] gi| 0.967 0.221 0.687 6e-72
442540097 790 heat shock protein 90 [Scylla paramamosa 0.967 0.222 0.703 1e-71
195394999 791 GJ10398 [Drosophila virilis] gi|19414283 0.967 0.222 0.703 1e-71
>gi|193643557|ref|XP_001948937.1| PREDICTED: endoplasmin-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  290 bits (741), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 127/176 (72%), Positives = 157/176 (89%)

Query: 7   QVESSPFVERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIAKEGLSISANKEKMEA 66
           ++E SPFVE ++RKGYE+LYLIEAVDEYTLS++PEFEGKKFQN+AKEG+S++ NKEK E 
Sbjct: 554 ELERSPFVEGIIRKGYEVLYLIEAVDEYTLSAIPEFEGKKFQNVAKEGVSLTDNKEKAEE 613

Query: 67  LKTQYEPLLKWLSEKALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKA 126
           LK Q+EPL KW  E ALKDQI+KA +S+RL++SPCALVA MFGWTGNMERLA+SNAHQKA
Sbjct: 614 LKVQFEPLTKWFGENALKDQISKAVVSDRLAESPCALVAGMFGWTGNMERLALSNAHQKA 673

Query: 127 DDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTGTLREG 182
           DDPQR++YL Q+K++E+NPRHPLI++L RRV+DDPED KA +IA M+F+T TLR G
Sbjct: 674 DDPQREFYLKQRKSLEINPRHPLIKDLLRRVRDDPEDQKAKDIAVMLFRTATLRSG 729




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|326532784|dbj|BAJ89237.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information
>gi|91089871|ref|XP_971540.1| PREDICTED: similar to Glycoprotein 93 CG5520-PA [Tribolium castaneum] gi|270013565|gb|EFA10013.1| hypothetical protein TcasGA2_TC012185 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|241997148|gb|ACS75351.1| endoplasmin [Locusta migratoria] Back     alignment and taxonomy information
>gi|195108998|ref|XP_001999079.1| GI24315 [Drosophila mojavensis] gi|193915673|gb|EDW14540.1| GI24315 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|195037341|ref|XP_001990119.1| GH18412 [Drosophila grimshawi] gi|193894315|gb|EDV93181.1| GH18412 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|332376398|gb|AEE63339.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
>gi|170032518|ref|XP_001844128.1| endoplasmin [Culex quinquefasciatus] gi|167872598|gb|EDS35981.1| endoplasmin [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|442540097|gb|AGC54636.1| heat shock protein 90 [Scylla paramamosain] Back     alignment and taxonomy information
>gi|195394999|ref|XP_002056124.1| GJ10398 [Drosophila virilis] gi|194142833|gb|EDW59236.1| GJ10398 [Drosophila virilis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query182
FB|FBgn0039562787 Gp93 "Glycoprotein 93" [Drosop 0.967 0.223 0.687 2e-65
UNIPROTKB|Q95M18804 HSP90B1 "Endoplasmin" [Bos tau 0.967 0.218 0.564 3.7e-55
UNIPROTKB|F1SRK6804 HSP90B1 "Endoplasmin" [Sus scr 0.967 0.218 0.564 3.7e-55
UNIPROTKB|Q29092804 HSP90B1 "Endoplasmin" [Sus scr 0.967 0.218 0.564 3.7e-55
UNIPROTKB|F1P8N6803 HSP90B1 "Endoplasmin" [Canis l 0.967 0.219 0.558 6.2e-55
UNIPROTKB|P41148804 HSP90B1 "Endoplasmin" [Canis l 0.967 0.218 0.558 6.4e-55
UNIPROTKB|Q5R6F7804 HSP90B1 "Endoplasmin" [Pongo a 0.967 0.218 0.558 6.4e-55
UNIPROTKB|P14625803 HSP90B1 "Endoplasmin" [Homo sa 0.967 0.219 0.558 8.1e-55
UNIPROTKB|Q4R520804 HSP90B1 "Endoplasmin" [Macaca 0.967 0.218 0.558 8.4e-55
UNIPROTKB|P08712400 HSP90B1 "Endoplasmin" [Mesocri 0.967 0.44 0.564 9.9e-55
FB|FBgn0039562 Gp93 "Glycoprotein 93" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
 Identities = 123/179 (68%), Positives = 154/179 (86%)

Query:     7 QVESSPFVERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIAKEGLSISAN---KEK 63
             +VE SPFVERLL KGYE+LYL+EAVDEY +S+LPEF+GKKFQN+AKEG  ++ +   K+ 
Sbjct:   545 EVEKSPFVERLLSKGYEVLYLVEAVDEYCISALPEFDGKKFQNVAKEGFQLNESEKSKKN 604

Query:    64 MEALKTQYEPLLKWLSEKALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAH 123
              E+LK+ +EPL+KWL++ ALKDQI+KA++SERLS+SPCALVA +FGWTGNMERLAMSNAH
Sbjct:   605 FESLKSTFEPLVKWLNDVALKDQISKAQVSERLSNSPCALVAGVFGWTGNMERLAMSNAH 664

Query:   124 QKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTGTLREG 182
             QK+DDPQR YYL+QKKT+E+NPRHPL+REL RRV+ D  D  A ++A MMF+T TLR G
Sbjct:   665 QKSDDPQRTYYLNQKKTLEINPRHPLMRELLRRVEADEADDTAKDMAVMMFRTATLRSG 723




GO:0051082 "unfolded protein binding" evidence=ISS
GO:0006457 "protein folding" evidence=ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0006950 "response to stress" evidence=IEA
GO:0005811 "lipid particle" evidence=IDA
GO:0005615 "extracellular space" evidence=IDA
GO:0061031 "endodermal digestive tract morphogenesis" evidence=IMP
GO:0007494 "midgut development" evidence=IMP
UNIPROTKB|Q95M18 HSP90B1 "Endoplasmin" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SRK6 HSP90B1 "Endoplasmin" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q29092 HSP90B1 "Endoplasmin" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1P8N6 HSP90B1 "Endoplasmin" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P41148 HSP90B1 "Endoplasmin" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q5R6F7 HSP90B1 "Endoplasmin" [Pongo abelii (taxid:9601)] Back     alignment and assigned GO terms
UNIPROTKB|P14625 HSP90B1 "Endoplasmin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q4R520 HSP90B1 "Endoplasmin" [Macaca fascicularis (taxid:9541)] Back     alignment and assigned GO terms
UNIPROTKB|P08712 HSP90B1 "Endoplasmin" [Mesocricetus auratus (taxid:10036)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q29092ENPL_PIGNo assigned EC number0.56420.96700.2189yesN/A
O18750ENPL_RABITNo assigned EC number0.54180.93950.2388yesN/A
Q95M18ENPL_BOVINNo assigned EC number0.56420.96700.2189yesN/A
P41148ENPL_CANFANo assigned EC number0.55860.96700.2189yesN/A
P14625ENPL_HUMANNo assigned EC number0.55860.96700.2191yesN/A
P08110ENPL_CHICKNo assigned EC number0.55860.96700.2213yesN/A
P08113ENPL_MOUSENo assigned EC number0.55860.96700.2194yesN/A
Q5R6F7ENPL_PONABNo assigned EC number0.55860.96700.2189yesN/A
Q66HD0ENPL_RATNo assigned EC number0.56420.96700.2189yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query182
pfam00183529 pfam00183, HSP90, Hsp90 protein 1e-56
PTZ00272701 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp 9e-37
PRK05218613 PRK05218, PRK05218, heat shock protein 90; Provisi 4e-34
COG0326623 COG0326, HtpG, Molecular chaperone, HSP90 family [ 5e-31
PTZ00130814 PTZ00130, PTZ00130, heat shock protein 90; Provisi 2e-25
>gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein Back     alignment and domain information
 Score =  185 bits (472), Expect = 1e-56
 Identities = 83/179 (46%), Positives = 119/179 (66%), Gaps = 7/179 (3%)

Query: 7   QVESSPFVERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIAKEGLSISAN---KEK 63
           QVE SPF+ERL +KGYE+LY+ + +DEY +  L EFEGKK  N+ KEGL +  +   K+K
Sbjct: 298 QVEKSPFLERLKKKGYEVLYMTDPIDEYAMQQLKEFEGKKLVNVTKEGLKLEESEEEKKK 357

Query: 64  MEALKTQYEPLLKWLSEKALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAH 123
            E LK ++E L KW+ +  L D++ K  +S RL DSPCALV S +GW+ NMER+  + A 
Sbjct: 358 REELKKEFEELCKWM-KDILGDKVEKVVVSNRLVDSPCALVTSQYGWSANMERIMKAQAL 416

Query: 124 QKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTGTLREG 182
           +   D     Y+S KKT+E+NPRHP+I+EL +RV+ D  D    ++A ++++T  L  G
Sbjct: 417 R---DSSMSAYMSSKKTLEINPRHPIIKELRKRVEADKNDKTVKDLARLLYETALLTSG 472


Length = 529

>gnl|CDD|240341 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information
>gnl|CDD|235366 PRK05218, PRK05218, heat shock protein 90; Provisional Back     alignment and domain information
>gnl|CDD|223403 COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|185466 PTZ00130, PTZ00130, heat shock protein 90; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 182
PF00183531 HSP90: Hsp90 protein; InterPro: IPR001404 Molecula 100.0
KOG0019|consensus656 100.0
PTZ00272701 heat shock protein 83 kDa (Hsp83); Provisional 100.0
PTZ00130814 heat shock protein 90; Provisional 100.0
KOG0020|consensus785 100.0
PRK05218613 heat shock protein 90; Provisional 100.0
COG0326623 HtpG Molecular chaperone, HSP90 family [Posttransl 100.0
PRK14083601 HSP90 family protein; Provisional 99.97
PF06112147 Herpes_capsid: Gammaherpesvirus capsid protein; In 84.68
>PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell [] Back     alignment and domain information
Probab=100.00  E-value=6.7e-51  Score=370.57  Aligned_cols=175  Identities=41%  Similarity=0.779  Sum_probs=150.0

Q ss_pred             chHHHhcCHHHHHHHhCCCeEEEecCCchhhhhccccccCCcceeeccCCCCCc-c--hhhhhHHHhHHhHHHHHHHHHh
Q psy13239          4 LPVQVESSPFVERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIAKEGLSI-S--ANKEKMEALKTQYEPLLKWLSE   80 (182)
Q Consensus         4 ~~~~~~~sP~lE~~k~kg~EVL~l~d~iDe~~i~~l~~~~~~~f~sV~~~~~~~-~--~~k~~~~~~~~~~~~L~~~~k~   80 (182)
                      +.+++++|||+|.|++||||||||+||||+|||++|++|+|++|+||+++++++ +  +++...+..++++++|++|||+
T Consensus       297 s~~~~~~SP~lE~~k~kG~EVL~l~dpIDe~~i~~L~e~~gkkf~~I~ke~l~l~~~e~ek~~~e~~~~~~~~L~~~~k~  376 (531)
T PF00183_consen  297 SREEAEQSPYLEAFKKKGYEVLFLTDPIDEFVIQQLEEYEGKKFQSIDKEDLDLEEDEEEKKEDEELKEEFKPLTEWLKE  376 (531)
T ss_dssp             SHHHHHTSGGGHHHHHCT--EEEE-SHHHHHHHHHHSEETTEEEEETTBSSSSSSTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHhhccchhhHHhhCceEEEeCCchHHHHHHHHhhccccccccccccccccccchhhhhhhhhhhhHHHHHHHHHHh
Confidence            678999999999999999999999999999999999999999999999999887 2  2344456678899999999999


Q ss_pred             hhhccccceEEEeecCCCCcEEEEecCCCCcHHHHHHHHHhhhhcCCChhhhhccCCCceEEEcCCChHHHHHHHhccCC
Q psy13239         81 KALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDD  160 (182)
Q Consensus        81 ~~L~~~v~~V~vs~rL~~sPa~iv~~e~~~s~~M~r~m~~~~~~~~~~~~~~~~~~~k~~LEINp~HplI~~L~~~~~~~  160 (182)
                       +|+++|.+|++|.||++|||||+++++|+|++|||||+||+++   +.+...++..++||||||+||||++|++++..+
T Consensus       377 -~L~~kV~~V~vS~RL~~sPa~lv~~e~g~s~~Merimkaqa~~---~~~~~~~~~~kkiLEINp~HPLIk~L~~~~~~d  452 (531)
T PF00183_consen  377 -LLGDKVEKVKVSNRLVDSPAVLVSSEYGWSANMERIMKAQAMA---DMSMQEYMPSKKILEINPNHPLIKKLLKLVEKD  452 (531)
T ss_dssp             -HHTTSCSEEEE-SSSSSSSEEEEE-SSSB-HHHHHHHHHHHCC---STTTSSTSC--EEEEE-TTSHHHHHHHHHHHCC
T ss_pred             -hhhhhhheecccccccCCcceeecccchhHHHHHHHhhhhccc---cccccccccccceeecCCCCHHHHHHHhhhccc
Confidence             9999999999999999999999999999999999999999763   222234567889999999999999999998888


Q ss_pred             CChHHHHHHHHHHHHhccccCC
Q psy13239        161 PEDAKATEIATMMFQTGTLREG  182 (182)
Q Consensus       161 ~~~~~~~~~~~~lyd~All~~G  182 (182)
                      ++++.++++|+||||+|+|++|
T Consensus       453 ~~d~~~~~la~~LyD~AlL~~G  474 (531)
T PF00183_consen  453 EDDELAKDLAEQLYDTALLASG  474 (531)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHTT
T ss_pred             chhhHHHHHHHHHhhhhhhhcC
Confidence            8888999999999999999998



They assist in the folding of nascent polypeptide chains, and are also involved in the re-folding of denatured proteins following proteotoxic stress. As their name implies, the heat shock proteins were first identified as proteins that were up-regulated under conditions of elevated temperature. However, subsequent studies have shown that increased Hsp expression is induced by a variety of cellular stresses, including oxidative stress and inflammation. Five major Hsp families have been determined, and are categorized according to their molecular size (Hsp100, Hsp90, Hsp70, Hsp60, and the small Hsps). Hsps are involved in a variety of cellular processes that are ATP-dependent. These include: prevention of protein aggregation, protein degradation, protein trafficking, and maintenance of signalling proteins in a conformation that permits activation. Hsp90 chaperones are unique in their ability to regulate a specific subset of cellular signalling proteins that have been implicated in disease processes, including intracellular protein kinases, steroid hormone receptors, and growth factor receptors [].; GO: 0005524 ATP binding, 0051082 unfolded protein binding, 0006457 protein folding, 0006950 response to stress; PDB: 3K99_D 2H55_A 3RLP_A 1OSF_A 3R4M_A 1YES_A 1UY9_A 3FT8_A 2YE2_A 2QF6_A ....

>KOG0019|consensus Back     alignment and domain information
>PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information
>PTZ00130 heat shock protein 90; Provisional Back     alignment and domain information
>KOG0020|consensus Back     alignment and domain information
>PRK05218 heat shock protein 90; Provisional Back     alignment and domain information
>COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14083 HSP90 family protein; Provisional Back     alignment and domain information
>PF06112 Herpes_capsid: Gammaherpesvirus capsid protein; InterPro: IPR009299 This family consists of several Gammaherpesvirus capsid proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query182
2o1u_A666 Structure Of Full Length Grp94 With Amp-Pnp Bound L 5e-60
2o1t_A450 Structure Of Middle Plus C-Terminal Domains (M+c) O 8e-60
3hjc_A444 Crystal Structure Of The Carboxy-Terminal Domain Of 1e-31
2cg9_A677 Crystal Structure Of An Hsp90-Sba1 Closed Chaperone 9e-26
2cge_A405 Crystal Structure Of An Hsp90-Sba1 Closed Chaperone 9e-26
3q6m_A448 Crystal Structure Of Human Mc-Hsp90 In C2221 Space 3e-24
2o1w_A506 Structure Of N-Terminal Plus Middle Domains (N+m) O 2e-15
2iop_A624 Crystal Structure Of Full-Length Htpg, The Escheric 8e-11
3pry_A268 Crystal Structure Of The Middle Domain Of Human Hsp 1e-09
1hk7_A288 Middle Domain Of Hsp90 Length = 288 2e-08
1y4s_A559 Conformation Rearrangement Of Heat Shock Protein 90 5e-07
1usv_A260 The Structure Of The Complex Between Aha1 And Hsp90 2e-06
1usu_A260 The Structure Of The Complex Between Aha1 And Hsp90 2e-06
2gq0_A303 Crystal Structure Of The Middle Domain Of Htpg, The 1e-05
>pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound Length = 666 Back     alignment and structure

Iteration: 1

Score = 226 bits (577), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 100/179 (55%), Positives = 139/179 (77%), Gaps = 3/179 (1%) Query: 7 QVESSPFVERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIAKEGLSISAN---KEK 63 + ESSPFVERLL+KGYE++YL E VDEY + +LPEF+GK+FQN+AKEG+ + KE Sbjct: 460 EAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKES 519 Query: 64 MEALKTQYEPLLKWLSEKALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAH 123 EA++ ++EPLL W+ +KALKD+I KA +S+RL++SPCALVAS +GW+GNMER+ + A+ Sbjct: 520 REAIEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAY 579 Query: 124 QKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTGTLREG 182 Q D YY SQKKT E+NPRHPLI+++ RRVK+D +D +++A ++F+T TLR G Sbjct: 580 QTGKDISTNYYASQKKTFEINPRHPLIKDMLRRVKEDEDDKTVSDLAVVLFETATLRSG 638
>pdb|2O1T|A Chain A, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94 Length = 450 Back     alignment and structure
>pdb|3HJC|A Chain A, Crystal Structure Of The Carboxy-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312 Length = 444 Back     alignment and structure
>pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 677 Back     alignment and structure
>pdb|2CGE|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 405 Back     alignment and structure
>pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group Length = 448 Back     alignment and structure
>pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94 Length = 506 Back     alignment and structure
>pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 624 Back     alignment and structure
>pdb|3PRY|A Chain A, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta Refined At 2.3 A Resolution Length = 268 Back     alignment and structure
>pdb|1HK7|A Chain A, Middle Domain Of Hsp90 Length = 288 Back     alignment and structure
>pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon Adp Binding Length = 559 Back     alignment and structure
>pdb|1USV|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 Back     alignment and structure
>pdb|1USU|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 Back     alignment and structure
>pdb|2GQ0|A Chain A, Crystal Structure Of The Middle Domain Of Htpg, The E. Coli Hsp90 Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query182
3q6m_A448 Heat shock protein HSP 90-alpha; three domains, tr 6e-63
3hjc_A444 Heat shock protein 83-1; sleeping sickness, struct 2e-62
2cge_A405 ATP-dependent molecular chaperone HSP82; chaperone 2e-58
2cg9_A677 ATP-dependent molecular chaperone HSP82; chaperone 2e-58
2o1u_A666 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 3e-58
2ioq_A624 Chaperone protein HTPG; heat shock protein, HSP90; 2e-48
1y4s_A559 Chaperone protein HTPG; HSP90, molecular chaperone 2e-34
1sf8_A126 Chaperone protein HTPG; four helix bundle dimeriza 9e-26
1hk7_A288 Heat shock protein HSP82; ATPase, chaperone; 2.5A 5e-24
2gq0_A303 Chaperone protein HTPG; molecular chaperone, HSP90 6e-21
3pry_A268 Heat shock protein HSP 90-beta; structural genomic 1e-19
1usu_A260 Heat shock protein HSP82; chaperone/complex, chape 4e-18
1y6z_A263 Heat shock protein, putative; chaperone, structura 3e-16
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Length = 448 Back     alignment and structure
 Score =  199 bits (509), Expect = 6e-63
 Identities = 67/179 (37%), Positives = 105/179 (58%), Gaps = 7/179 (3%)

Query: 7   QVESSPFVERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIAKEGLSIS---ANKEK 63
           QV +S FVERL + G E++Y+IE +DEY +  L EFEGK   ++ KEGL +      K+K
Sbjct: 211 QVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKK 270

Query: 64  MEALKTQYEPLLKWLSEKALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAH 123
            E  KT++E L K + +  L+ ++ K  +S RL  SPC +V S +GWT NMER+  + A 
Sbjct: 271 QEEKKTKFENLCKIMKD-ILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQAL 329

Query: 124 QKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTGTLREG 182
           +   D     Y++ KK +E+NP H +I  L ++ + D  D    ++  ++++T  L  G
Sbjct: 330 R---DNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSG 385


>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Length = 444 Back     alignment and structure
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Length = 405 Back     alignment and structure
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Length = 677 Back     alignment and structure
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Length = 666 Back     alignment and structure
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Length = 624 Back     alignment and structure
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Length = 559 Back     alignment and structure
>1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Length = 126 Back     alignment and structure
>1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 Length = 288 Back     alignment and structure
>2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} Length = 303 Back     alignment and structure
>3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} Length = 268 Back     alignment and structure
>1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A Length = 260 Back     alignment and structure
>1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} Length = 263 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query182
3q6m_A448 Heat shock protein HSP 90-alpha; three domains, tr 100.0
3hjc_A444 Heat shock protein 83-1; sleeping sickness, struct 100.0
2cge_A405 ATP-dependent molecular chaperone HSP82; chaperone 100.0
2o1u_A666 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 100.0
2cg9_A677 ATP-dependent molecular chaperone HSP82; chaperone 100.0
2ioq_A624 Chaperone protein HTPG; heat shock protein, HSP90; 100.0
1sf8_A126 Chaperone protein HTPG; four helix bundle dimeriza 100.0
1y4s_A559 Chaperone protein HTPG; HSP90, molecular chaperone 99.97
2gq0_A303 Chaperone protein HTPG; molecular chaperone, HSP90 99.82
1hk7_A288 Heat shock protein HSP82; ATPase, chaperone; 2.5A 99.79
3pry_A268 Heat shock protein HSP 90-beta; structural genomic 99.63
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Back     alignment and structure
Probab=100.00  E-value=1.6e-53  Score=377.63  Aligned_cols=175  Identities=38%  Similarity=0.706  Sum_probs=149.2

Q ss_pred             chHHHhcCHHHHHHHhCCCeEEEecCCchhhhhccccccCCcceeeccCCCCCc-c--hhhhhHHHhHHhHHHHHHHHHh
Q psy13239          4 LPVQVESSPFVERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIAKEGLSI-S--ANKEKMEALKTQYEPLLKWLSE   80 (182)
Q Consensus         4 ~~~~~~~sP~lE~~k~kg~EVL~l~d~iDe~~i~~l~~~~~~~f~sV~~~~~~~-~--~~k~~~~~~~~~~~~L~~~~k~   80 (182)
                      +.+++++|||+|.|++||||||||++||||||+++|++|+|++|+||+++++++ +  ++++..+..++++++||+|||+
T Consensus       208 s~~~~~~sp~lE~~k~kG~EVL~l~d~iDe~~i~~L~ef~gk~~~sV~k~~l~l~~~eeek~~~ee~~~~~~~L~~~~K~  287 (448)
T 3q6m_A          208 TKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKD  287 (448)
T ss_dssp             CHHHHHTSGGGHHHHHHTCCEEEECSTHHHHHTTTCCEETTEEEEETTBSCCCCCCCHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             CHHHHHhChHHHHHHHCCCEEEEecCchHHHHHHHHHhhCCceEEEecccccCcccchhhhhhHHHHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999999999999999987 2  2333344556789999999999


Q ss_pred             hhhccccceEEEeecCCCCcEEEEecCCCCcHHHHHHHHHhhhhcCCChhhhhccCCCceEEEcCCChHHHHHHHhccCC
Q psy13239         81 KALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDD  160 (182)
Q Consensus        81 ~~L~~~v~~V~vs~rL~~sPa~iv~~e~~~s~~M~r~m~~~~~~~~~~~~~~~~~~~k~~LEINp~HplI~~L~~~~~~~  160 (182)
                       +|+++|++|++|+||++||||||++++|||++|||||++|++   ++++.++++..++||||||+||||++|.++.+.+
T Consensus       288 -~L~~kV~~V~vS~RL~~sP~~lv~~e~g~s~~Merimkaq~~---~d~~~~~~~~~kk~LEINp~Hpli~~L~~~~~~d  363 (448)
T 3q6m_A          288 -ILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQAL---RDNSTMGYMAAKKHLEINPDHSIIETLRQKAEAD  363 (448)
T ss_dssp             -HTGGGCSEEEECSSCSSSSEEEEECSSSCCHHHHHHCCC-----------------CEEEEECTTCHHHHHHHHHHHHC
T ss_pred             -HhcCcceEEEecCCCCCCCeEEEeCCcchhHHHHHHHHHhhc---cccccccccccCceeEECCCCHHHHHHHHHhhcc
Confidence             999999999999999999999999999999999999999865   3333345677899999999999999999987766


Q ss_pred             CChHHHHHHHHHHHHhccccCC
Q psy13239        161 PEDAKATEIATMMFQTGTLREG  182 (182)
Q Consensus       161 ~~~~~~~~~~~~lyd~All~~G  182 (182)
                      ++++.++++|++|||+|+|++|
T Consensus       364 ~~~~~~~~~~~lLyd~AlL~~G  385 (448)
T 3q6m_A          364 KNDKSVKDLVILLYETALLSSG  385 (448)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHTT
T ss_pred             cchhHHHHHHHHHHHhHHhcCC
Confidence            7778899999999999999998



>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Back     alignment and structure
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Back     alignment and structure
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Back     alignment and structure
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Back     alignment and structure
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Back     alignment and structure
>1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Back     alignment and structure
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Back     alignment and structure
>2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} Back     alignment and structure
>1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 Back     alignment and structure
>3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} SCOP: d.14.1.8 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 182
d1sf8a_115 d.271.1.1 (A:) Chaperone protein HtpG {Escherichia 2e-16
d1usua_256 d.14.1.8 (A:) Heat shock protein hsp82 {Baker's ye 8e-14
>d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: HSP90 C-terminal domain
superfamily: HSP90 C-terminal domain
family: HSP90 C-terminal domain
domain: Chaperone protein HtpG
species: Escherichia coli [TaxId: 562]
 Score = 69.5 bits (170), Expect = 2e-16
 Identities = 19/109 (17%), Positives = 42/109 (38%), Gaps = 14/109 (12%)

Query: 74  LLKWLSEKALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKY 133
            +  +    L +++    ++ RL+D+P  +       +  M +L  +   +  +      
Sbjct: 2   FIDRVKA-LLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPE------ 54

Query: 134 YLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTGTLREG 182
               K   E+NP H L++       D  ++AK +E   ++     L E 
Sbjct: 55  ---VKYIFELNPDHVLVKRA----ADTEDEAKFSEWVELLLDQALLAER 96


>d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 256 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query182
d1sf8a_115 Chaperone protein HtpG {Escherichia coli [TaxId: 5 100.0
>d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: HSP90 C-terminal domain
superfamily: HSP90 C-terminal domain
family: HSP90 C-terminal domain
domain: Chaperone protein HtpG
species: Escherichia coli [TaxId: 562]
Probab=100.00  E-value=2.7e-34  Score=211.88  Aligned_cols=95  Identities=19%  Similarity=0.352  Sum_probs=86.4

Q ss_pred             HHHHHHhhhhccccceEEEeecCCCCcEEEEecCCCCcHHHHHHHHHhhhhcCCChhhhhccCCCceEEEcCCChHHHHH
Q psy13239         74 LLKWLSEKALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIREL  153 (182)
Q Consensus        74 L~~~~k~~~L~~~v~~V~vs~rL~~sPa~iv~~e~~~s~~M~r~m~~~~~~~~~~~~~~~~~~~k~~LEINp~HplI~~L  153 (182)
                      |++|+|+ +|+++|++|++|+||++|||||+++++|||++|||||++|    |++     ++..++||||||+||||++|
T Consensus         2 l~~~~K~-~L~d~V~~V~~S~RL~~sP~~lv~~~~~~s~~M~kimk~~----~~~-----~~~~k~iLEiNp~H~lIk~l   71 (115)
T d1sf8a_           2 FIDRVKA-LLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAA----GQK-----VPEVKYIFELNPDHVLVKRA   71 (115)
T ss_dssp             HHHHHHH-HHGGGSSEEEECCCCSSCCEEEECCTTSCCHHHHHHHHTT----TSC-----CCCCCCEEEECTTSHHHHHH
T ss_pred             HHHHHHH-HhcCcccEEeeccccccCceeeecCCcchHHHHHHHHHHh----ccc-----cccccceeeeCCCCHHHHHH
Confidence            8999999 9999999999999999999999999999999999999998    444     34578999999999999999


Q ss_pred             HHhccCCCChHHHHHHHHHHHHhccccCC
Q psy13239        154 YRRVKDDPEDAKATEIATMMFQTGTLREG  182 (182)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~lyd~All~~G  182 (182)
                      .+.    .+++.+++++++|||+|+|++|
T Consensus        72 ~~~----~~~~~~~~~~~~L~d~A~l~~G   96 (115)
T d1sf8a_          72 ADT----EDEAKFSEWVELLLDQALLAER   96 (115)
T ss_dssp             HHC----CSHHHHHHHHHHHHHHHHHHHH
T ss_pred             Hhc----cchHHHHHHHHHHHHHHHHhCC
Confidence            753    5567899999999999999886