Psyllid ID: psy13239
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 182 | ||||||
| 193643557 | 784 | PREDICTED: endoplasmin-like [Acyrthosiph | 0.967 | 0.224 | 0.721 | 2e-76 | |
| 326532784 | 783 | predicted protein [Hordeum vulgare subsp | 0.967 | 0.224 | 0.715 | 4e-76 | |
| 91089871 | 782 | PREDICTED: similar to Glycoprotein 93 CG | 0.967 | 0.225 | 0.715 | 3e-75 | |
| 241997148 | 790 | endoplasmin [Locusta migratoria] | 0.967 | 0.222 | 0.726 | 6e-75 | |
| 195108998 | 790 | GI24315 [Drosophila mojavensis] gi|19391 | 0.967 | 0.222 | 0.720 | 9e-74 | |
| 195037341 | 794 | GH18412 [Drosophila grimshawi] gi|193894 | 0.967 | 0.221 | 0.720 | 2e-73 | |
| 332376398 | 781 | unknown [Dendroctonus ponderosae] | 0.967 | 0.225 | 0.698 | 3e-72 | |
| 170032518 | 794 | endoplasmin [Culex quinquefasciatus] gi| | 0.967 | 0.221 | 0.687 | 6e-72 | |
| 442540097 | 790 | heat shock protein 90 [Scylla paramamosa | 0.967 | 0.222 | 0.703 | 1e-71 | |
| 195394999 | 791 | GJ10398 [Drosophila virilis] gi|19414283 | 0.967 | 0.222 | 0.703 | 1e-71 |
| >gi|193643557|ref|XP_001948937.1| PREDICTED: endoplasmin-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 127/176 (72%), Positives = 157/176 (89%)
Query: 7 QVESSPFVERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIAKEGLSISANKEKMEA 66
++E SPFVE ++RKGYE+LYLIEAVDEYTLS++PEFEGKKFQN+AKEG+S++ NKEK E
Sbjct: 554 ELERSPFVEGIIRKGYEVLYLIEAVDEYTLSAIPEFEGKKFQNVAKEGVSLTDNKEKAEE 613
Query: 67 LKTQYEPLLKWLSEKALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKA 126
LK Q+EPL KW E ALKDQI+KA +S+RL++SPCALVA MFGWTGNMERLA+SNAHQKA
Sbjct: 614 LKVQFEPLTKWFGENALKDQISKAVVSDRLAESPCALVAGMFGWTGNMERLALSNAHQKA 673
Query: 127 DDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTGTLREG 182
DDPQR++YL Q+K++E+NPRHPLI++L RRV+DDPED KA +IA M+F+T TLR G
Sbjct: 674 DDPQREFYLKQRKSLEINPRHPLIKDLLRRVRDDPEDQKAKDIAVMLFRTATLRSG 729
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|326532784|dbj|BAJ89237.1| predicted protein [Hordeum vulgare subsp. vulgare] | Back alignment and taxonomy information |
|---|
| >gi|91089871|ref|XP_971540.1| PREDICTED: similar to Glycoprotein 93 CG5520-PA [Tribolium castaneum] gi|270013565|gb|EFA10013.1| hypothetical protein TcasGA2_TC012185 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|241997148|gb|ACS75351.1| endoplasmin [Locusta migratoria] | Back alignment and taxonomy information |
|---|
| >gi|195108998|ref|XP_001999079.1| GI24315 [Drosophila mojavensis] gi|193915673|gb|EDW14540.1| GI24315 [Drosophila mojavensis] | Back alignment and taxonomy information |
|---|
| >gi|195037341|ref|XP_001990119.1| GH18412 [Drosophila grimshawi] gi|193894315|gb|EDV93181.1| GH18412 [Drosophila grimshawi] | Back alignment and taxonomy information |
|---|
| >gi|332376398|gb|AEE63339.1| unknown [Dendroctonus ponderosae] | Back alignment and taxonomy information |
|---|
| >gi|170032518|ref|XP_001844128.1| endoplasmin [Culex quinquefasciatus] gi|167872598|gb|EDS35981.1| endoplasmin [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
| >gi|442540097|gb|AGC54636.1| heat shock protein 90 [Scylla paramamosain] | Back alignment and taxonomy information |
|---|
| >gi|195394999|ref|XP_002056124.1| GJ10398 [Drosophila virilis] gi|194142833|gb|EDW59236.1| GJ10398 [Drosophila virilis] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 182 | ||||||
| FB|FBgn0039562 | 787 | Gp93 "Glycoprotein 93" [Drosop | 0.967 | 0.223 | 0.687 | 2e-65 | |
| UNIPROTKB|Q95M18 | 804 | HSP90B1 "Endoplasmin" [Bos tau | 0.967 | 0.218 | 0.564 | 3.7e-55 | |
| UNIPROTKB|F1SRK6 | 804 | HSP90B1 "Endoplasmin" [Sus scr | 0.967 | 0.218 | 0.564 | 3.7e-55 | |
| UNIPROTKB|Q29092 | 804 | HSP90B1 "Endoplasmin" [Sus scr | 0.967 | 0.218 | 0.564 | 3.7e-55 | |
| UNIPROTKB|F1P8N6 | 803 | HSP90B1 "Endoplasmin" [Canis l | 0.967 | 0.219 | 0.558 | 6.2e-55 | |
| UNIPROTKB|P41148 | 804 | HSP90B1 "Endoplasmin" [Canis l | 0.967 | 0.218 | 0.558 | 6.4e-55 | |
| UNIPROTKB|Q5R6F7 | 804 | HSP90B1 "Endoplasmin" [Pongo a | 0.967 | 0.218 | 0.558 | 6.4e-55 | |
| UNIPROTKB|P14625 | 803 | HSP90B1 "Endoplasmin" [Homo sa | 0.967 | 0.219 | 0.558 | 8.1e-55 | |
| UNIPROTKB|Q4R520 | 804 | HSP90B1 "Endoplasmin" [Macaca | 0.967 | 0.218 | 0.558 | 8.4e-55 | |
| UNIPROTKB|P08712 | 400 | HSP90B1 "Endoplasmin" [Mesocri | 0.967 | 0.44 | 0.564 | 9.9e-55 |
| FB|FBgn0039562 Gp93 "Glycoprotein 93" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 123/179 (68%), Positives = 154/179 (86%)
Query: 7 QVESSPFVERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIAKEGLSISAN---KEK 63
+VE SPFVERLL KGYE+LYL+EAVDEY +S+LPEF+GKKFQN+AKEG ++ + K+
Sbjct: 545 EVEKSPFVERLLSKGYEVLYLVEAVDEYCISALPEFDGKKFQNVAKEGFQLNESEKSKKN 604
Query: 64 MEALKTQYEPLLKWLSEKALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAH 123
E+LK+ +EPL+KWL++ ALKDQI+KA++SERLS+SPCALVA +FGWTGNMERLAMSNAH
Sbjct: 605 FESLKSTFEPLVKWLNDVALKDQISKAQVSERLSNSPCALVAGVFGWTGNMERLAMSNAH 664
Query: 124 QKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTGTLREG 182
QK+DDPQR YYL+QKKT+E+NPRHPL+REL RRV+ D D A ++A MMF+T TLR G
Sbjct: 665 QKSDDPQRTYYLNQKKTLEINPRHPLMRELLRRVEADEADDTAKDMAVMMFRTATLRSG 723
|
|
| UNIPROTKB|Q95M18 HSP90B1 "Endoplasmin" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1SRK6 HSP90B1 "Endoplasmin" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q29092 HSP90B1 "Endoplasmin" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1P8N6 HSP90B1 "Endoplasmin" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P41148 HSP90B1 "Endoplasmin" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5R6F7 HSP90B1 "Endoplasmin" [Pongo abelii (taxid:9601)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P14625 HSP90B1 "Endoplasmin" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q4R520 HSP90B1 "Endoplasmin" [Macaca fascicularis (taxid:9541)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P08712 HSP90B1 "Endoplasmin" [Mesocricetus auratus (taxid:10036)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 182 | |||
| pfam00183 | 529 | pfam00183, HSP90, Hsp90 protein | 1e-56 | |
| PTZ00272 | 701 | PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp | 9e-37 | |
| PRK05218 | 613 | PRK05218, PRK05218, heat shock protein 90; Provisi | 4e-34 | |
| COG0326 | 623 | COG0326, HtpG, Molecular chaperone, HSP90 family [ | 5e-31 | |
| PTZ00130 | 814 | PTZ00130, PTZ00130, heat shock protein 90; Provisi | 2e-25 |
| >gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein | Back alignment and domain information |
|---|
Score = 185 bits (472), Expect = 1e-56
Identities = 83/179 (46%), Positives = 119/179 (66%), Gaps = 7/179 (3%)
Query: 7 QVESSPFVERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIAKEGLSISAN---KEK 63
QVE SPF+ERL +KGYE+LY+ + +DEY + L EFEGKK N+ KEGL + + K+K
Sbjct: 298 QVEKSPFLERLKKKGYEVLYMTDPIDEYAMQQLKEFEGKKLVNVTKEGLKLEESEEEKKK 357
Query: 64 MEALKTQYEPLLKWLSEKALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAH 123
E LK ++E L KW+ + L D++ K +S RL DSPCALV S +GW+ NMER+ + A
Sbjct: 358 REELKKEFEELCKWM-KDILGDKVEKVVVSNRLVDSPCALVTSQYGWSANMERIMKAQAL 416
Query: 124 QKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTGTLREG 182
+ D Y+S KKT+E+NPRHP+I+EL +RV+ D D ++A ++++T L G
Sbjct: 417 R---DSSMSAYMSSKKTLEINPRHPIIKELRKRVEADKNDKTVKDLARLLYETALLTSG 472
|
Length = 529 |
| >gnl|CDD|240341 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp83); Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235366 PRK05218, PRK05218, heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223403 COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|185466 PTZ00130, PTZ00130, heat shock protein 90; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 182 | |||
| PF00183 | 531 | HSP90: Hsp90 protein; InterPro: IPR001404 Molecula | 100.0 | |
| KOG0019|consensus | 656 | 100.0 | ||
| PTZ00272 | 701 | heat shock protein 83 kDa (Hsp83); Provisional | 100.0 | |
| PTZ00130 | 814 | heat shock protein 90; Provisional | 100.0 | |
| KOG0020|consensus | 785 | 100.0 | ||
| PRK05218 | 613 | heat shock protein 90; Provisional | 100.0 | |
| COG0326 | 623 | HtpG Molecular chaperone, HSP90 family [Posttransl | 100.0 | |
| PRK14083 | 601 | HSP90 family protein; Provisional | 99.97 | |
| PF06112 | 147 | Herpes_capsid: Gammaherpesvirus capsid protein; In | 84.68 |
| >PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-51 Score=370.57 Aligned_cols=175 Identities=41% Similarity=0.779 Sum_probs=150.0
Q ss_pred chHHHhcCHHHHHHHhCCCeEEEecCCchhhhhccccccCCcceeeccCCCCCc-c--hhhhhHHHhHHhHHHHHHHHHh
Q psy13239 4 LPVQVESSPFVERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIAKEGLSI-S--ANKEKMEALKTQYEPLLKWLSE 80 (182)
Q Consensus 4 ~~~~~~~sP~lE~~k~kg~EVL~l~d~iDe~~i~~l~~~~~~~f~sV~~~~~~~-~--~~k~~~~~~~~~~~~L~~~~k~ 80 (182)
+.+++++|||+|.|++||||||||+||||+|||++|++|+|++|+||+++++++ + +++...+..++++++|++|||+
T Consensus 297 s~~~~~~SP~lE~~k~kG~EVL~l~dpIDe~~i~~L~e~~gkkf~~I~ke~l~l~~~e~ek~~~e~~~~~~~~L~~~~k~ 376 (531)
T PF00183_consen 297 SREEAEQSPYLEAFKKKGYEVLFLTDPIDEFVIQQLEEYEGKKFQSIDKEDLDLEEDEEEKKEDEELKEEFKPLTEWLKE 376 (531)
T ss_dssp SHHHHHTSGGGHHHHHCT--EEEE-SHHHHHHHHHHSEETTEEEEETTBSSSSSSTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHhhccchhhHHhhCceEEEeCCchHHHHHHHHhhccccccccccccccccccchhhhhhhhhhhhHHHHHHHHHHh
Confidence 678999999999999999999999999999999999999999999999999887 2 2344456678899999999999
Q ss_pred hhhccccceEEEeecCCCCcEEEEecCCCCcHHHHHHHHHhhhhcCCChhhhhccCCCceEEEcCCChHHHHHHHhccCC
Q psy13239 81 KALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDD 160 (182)
Q Consensus 81 ~~L~~~v~~V~vs~rL~~sPa~iv~~e~~~s~~M~r~m~~~~~~~~~~~~~~~~~~~k~~LEINp~HplI~~L~~~~~~~ 160 (182)
+|+++|.+|++|.||++|||||+++++|+|++|||||+||+++ +.+...++..++||||||+||||++|++++..+
T Consensus 377 -~L~~kV~~V~vS~RL~~sPa~lv~~e~g~s~~Merimkaqa~~---~~~~~~~~~~kkiLEINp~HPLIk~L~~~~~~d 452 (531)
T PF00183_consen 377 -LLGDKVEKVKVSNRLVDSPAVLVSSEYGWSANMERIMKAQAMA---DMSMQEYMPSKKILEINPNHPLIKKLLKLVEKD 452 (531)
T ss_dssp -HHTTSCSEEEE-SSSSSSSEEEEE-SSSB-HHHHHHHHHHHCC---STTTSSTSC--EEEEE-TTSHHHHHHHHHHHCC
T ss_pred -hhhhhhheecccccccCCcceeecccchhHHHHHHHhhhhccc---cccccccccccceeecCCCCHHHHHHHhhhccc
Confidence 9999999999999999999999999999999999999999763 222234567889999999999999999998888
Q ss_pred CChHHHHHHHHHHHHhccccCC
Q psy13239 161 PEDAKATEIATMMFQTGTLREG 182 (182)
Q Consensus 161 ~~~~~~~~~~~~lyd~All~~G 182 (182)
++++.++++|+||||+|+|++|
T Consensus 453 ~~d~~~~~la~~LyD~AlL~~G 474 (531)
T PF00183_consen 453 EDDELAKDLAEQLYDTALLASG 474 (531)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTT
T ss_pred chhhHHHHHHHHHhhhhhhhcC
Confidence 8888999999999999999998
|
They assist in the folding of nascent polypeptide chains, and are also involved in the re-folding of denatured proteins following proteotoxic stress. As their name implies, the heat shock proteins were first identified as proteins that were up-regulated under conditions of elevated temperature. However, subsequent studies have shown that increased Hsp expression is induced by a variety of cellular stresses, including oxidative stress and inflammation. Five major Hsp families have been determined, and are categorized according to their molecular size (Hsp100, Hsp90, Hsp70, Hsp60, and the small Hsps). Hsps are involved in a variety of cellular processes that are ATP-dependent. These include: prevention of protein aggregation, protein degradation, protein trafficking, and maintenance of signalling proteins in a conformation that permits activation. Hsp90 chaperones are unique in their ability to regulate a specific subset of cellular signalling proteins that have been implicated in disease processes, including intracellular protein kinases, steroid hormone receptors, and growth factor receptors [].; GO: 0005524 ATP binding, 0051082 unfolded protein binding, 0006457 protein folding, 0006950 response to stress; PDB: 3K99_D 2H55_A 3RLP_A 1OSF_A 3R4M_A 1YES_A 1UY9_A 3FT8_A 2YE2_A 2QF6_A .... |
| >KOG0019|consensus | Back alignment and domain information |
|---|
| >PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional | Back alignment and domain information |
|---|
| >PTZ00130 heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >KOG0020|consensus | Back alignment and domain information |
|---|
| >PRK05218 heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK14083 HSP90 family protein; Provisional | Back alignment and domain information |
|---|
| >PF06112 Herpes_capsid: Gammaherpesvirus capsid protein; InterPro: IPR009299 This family consists of several Gammaherpesvirus capsid proteins | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 182 | ||||
| 2o1u_A | 666 | Structure Of Full Length Grp94 With Amp-Pnp Bound L | 5e-60 | ||
| 2o1t_A | 450 | Structure Of Middle Plus C-Terminal Domains (M+c) O | 8e-60 | ||
| 3hjc_A | 444 | Crystal Structure Of The Carboxy-Terminal Domain Of | 1e-31 | ||
| 2cg9_A | 677 | Crystal Structure Of An Hsp90-Sba1 Closed Chaperone | 9e-26 | ||
| 2cge_A | 405 | Crystal Structure Of An Hsp90-Sba1 Closed Chaperone | 9e-26 | ||
| 3q6m_A | 448 | Crystal Structure Of Human Mc-Hsp90 In C2221 Space | 3e-24 | ||
| 2o1w_A | 506 | Structure Of N-Terminal Plus Middle Domains (N+m) O | 2e-15 | ||
| 2iop_A | 624 | Crystal Structure Of Full-Length Htpg, The Escheric | 8e-11 | ||
| 3pry_A | 268 | Crystal Structure Of The Middle Domain Of Human Hsp | 1e-09 | ||
| 1hk7_A | 288 | Middle Domain Of Hsp90 Length = 288 | 2e-08 | ||
| 1y4s_A | 559 | Conformation Rearrangement Of Heat Shock Protein 90 | 5e-07 | ||
| 1usv_A | 260 | The Structure Of The Complex Between Aha1 And Hsp90 | 2e-06 | ||
| 1usu_A | 260 | The Structure Of The Complex Between Aha1 And Hsp90 | 2e-06 | ||
| 2gq0_A | 303 | Crystal Structure Of The Middle Domain Of Htpg, The | 1e-05 |
| >pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound Length = 666 | Back alignment and structure |
|
| >pdb|2O1T|A Chain A, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94 Length = 450 | Back alignment and structure |
| >pdb|3HJC|A Chain A, Crystal Structure Of The Carboxy-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312 Length = 444 | Back alignment and structure |
| >pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 677 | Back alignment and structure |
| >pdb|2CGE|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 405 | Back alignment and structure |
| >pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group Length = 448 | Back alignment and structure |
| >pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94 Length = 506 | Back alignment and structure |
| >pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 624 | Back alignment and structure |
| >pdb|3PRY|A Chain A, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta Refined At 2.3 A Resolution Length = 268 | Back alignment and structure |
| >pdb|1HK7|A Chain A, Middle Domain Of Hsp90 Length = 288 | Back alignment and structure |
| >pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon Adp Binding Length = 559 | Back alignment and structure |
| >pdb|1USV|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 | Back alignment and structure |
| >pdb|1USU|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 | Back alignment and structure |
| >pdb|2GQ0|A Chain A, Crystal Structure Of The Middle Domain Of Htpg, The E. Coli Hsp90 Length = 303 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 182 | |||
| 3q6m_A | 448 | Heat shock protein HSP 90-alpha; three domains, tr | 6e-63 | |
| 3hjc_A | 444 | Heat shock protein 83-1; sleeping sickness, struct | 2e-62 | |
| 2cge_A | 405 | ATP-dependent molecular chaperone HSP82; chaperone | 2e-58 | |
| 2cg9_A | 677 | ATP-dependent molecular chaperone HSP82; chaperone | 2e-58 | |
| 2o1u_A | 666 | Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, | 3e-58 | |
| 2ioq_A | 624 | Chaperone protein HTPG; heat shock protein, HSP90; | 2e-48 | |
| 1y4s_A | 559 | Chaperone protein HTPG; HSP90, molecular chaperone | 2e-34 | |
| 1sf8_A | 126 | Chaperone protein HTPG; four helix bundle dimeriza | 9e-26 | |
| 1hk7_A | 288 | Heat shock protein HSP82; ATPase, chaperone; 2.5A | 5e-24 | |
| 2gq0_A | 303 | Chaperone protein HTPG; molecular chaperone, HSP90 | 6e-21 | |
| 3pry_A | 268 | Heat shock protein HSP 90-beta; structural genomic | 1e-19 | |
| 1usu_A | 260 | Heat shock protein HSP82; chaperone/complex, chape | 4e-18 | |
| 1y6z_A | 263 | Heat shock protein, putative; chaperone, structura | 3e-16 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-04 |
| >3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Length = 448 | Back alignment and structure |
|---|
Score = 199 bits (509), Expect = 6e-63
Identities = 67/179 (37%), Positives = 105/179 (58%), Gaps = 7/179 (3%)
Query: 7 QVESSPFVERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIAKEGLSIS---ANKEK 63
QV +S FVERL + G E++Y+IE +DEY + L EFEGK ++ KEGL + K+K
Sbjct: 211 QVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKK 270
Query: 64 MEALKTQYEPLLKWLSEKALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAH 123
E KT++E L K + + L+ ++ K +S RL SPC +V S +GWT NMER+ + A
Sbjct: 271 QEEKKTKFENLCKIMKD-ILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQAL 329
Query: 124 QKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTGTLREG 182
+ D Y++ KK +E+NP H +I L ++ + D D ++ ++++T L G
Sbjct: 330 R---DNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSG 385
|
| >3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Length = 444 | Back alignment and structure |
|---|
| >2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Length = 405 | Back alignment and structure |
|---|
| >2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Length = 677 | Back alignment and structure |
|---|
| >2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Length = 666 | Back alignment and structure |
|---|
| >2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Length = 624 | Back alignment and structure |
|---|
| >1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Length = 559 | Back alignment and structure |
|---|
| >1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Length = 126 | Back alignment and structure |
|---|
| >1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 Length = 288 | Back alignment and structure |
|---|
| >2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} Length = 303 | Back alignment and structure |
|---|
| >3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} Length = 268 | Back alignment and structure |
|---|
| >1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A Length = 260 | Back alignment and structure |
|---|
| >1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} Length = 263 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 182 | |||
| 3q6m_A | 448 | Heat shock protein HSP 90-alpha; three domains, tr | 100.0 | |
| 3hjc_A | 444 | Heat shock protein 83-1; sleeping sickness, struct | 100.0 | |
| 2cge_A | 405 | ATP-dependent molecular chaperone HSP82; chaperone | 100.0 | |
| 2o1u_A | 666 | Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, | 100.0 | |
| 2cg9_A | 677 | ATP-dependent molecular chaperone HSP82; chaperone | 100.0 | |
| 2ioq_A | 624 | Chaperone protein HTPG; heat shock protein, HSP90; | 100.0 | |
| 1sf8_A | 126 | Chaperone protein HTPG; four helix bundle dimeriza | 100.0 | |
| 1y4s_A | 559 | Chaperone protein HTPG; HSP90, molecular chaperone | 99.97 | |
| 2gq0_A | 303 | Chaperone protein HTPG; molecular chaperone, HSP90 | 99.82 | |
| 1hk7_A | 288 | Heat shock protein HSP82; ATPase, chaperone; 2.5A | 99.79 | |
| 3pry_A | 268 | Heat shock protein HSP 90-beta; structural genomic | 99.63 |
| >3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-53 Score=377.63 Aligned_cols=175 Identities=38% Similarity=0.706 Sum_probs=149.2
Q ss_pred chHHHhcCHHHHHHHhCCCeEEEecCCchhhhhccccccCCcceeeccCCCCCc-c--hhhhhHHHhHHhHHHHHHHHHh
Q psy13239 4 LPVQVESSPFVERLLRKGYEILYLIEAVDEYTLSSLPEFEGKKFQNIAKEGLSI-S--ANKEKMEALKTQYEPLLKWLSE 80 (182)
Q Consensus 4 ~~~~~~~sP~lE~~k~kg~EVL~l~d~iDe~~i~~l~~~~~~~f~sV~~~~~~~-~--~~k~~~~~~~~~~~~L~~~~k~ 80 (182)
+.+++++|||+|.|++||||||||++||||||+++|++|+|++|+||+++++++ + ++++..+..++++++||+|||+
T Consensus 208 s~~~~~~sp~lE~~k~kG~EVL~l~d~iDe~~i~~L~ef~gk~~~sV~k~~l~l~~~eeek~~~ee~~~~~~~L~~~~K~ 287 (448)
T 3q6m_A 208 TKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKD 287 (448)
T ss_dssp CHHHHHTSGGGHHHHHHTCCEEEECSTHHHHHTTTCCEETTEEEEETTBSCCCCCCCHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CHHHHHhChHHHHHHHCCCEEEEecCchHHHHHHHHHhhCCceEEEecccccCcccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999987 2 2333344556789999999999
Q ss_pred hhhccccceEEEeecCCCCcEEEEecCCCCcHHHHHHHHHhhhhcCCChhhhhccCCCceEEEcCCChHHHHHHHhccCC
Q psy13239 81 KALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIRELYRRVKDD 160 (182)
Q Consensus 81 ~~L~~~v~~V~vs~rL~~sPa~iv~~e~~~s~~M~r~m~~~~~~~~~~~~~~~~~~~k~~LEINp~HplI~~L~~~~~~~ 160 (182)
+|+++|++|++|+||++||||||++++|||++|||||++|++ ++++.++++..++||||||+||||++|.++.+.+
T Consensus 288 -~L~~kV~~V~vS~RL~~sP~~lv~~e~g~s~~Merimkaq~~---~d~~~~~~~~~kk~LEINp~Hpli~~L~~~~~~d 363 (448)
T 3q6m_A 288 -ILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQAL---RDNSTMGYMAAKKHLEINPDHSIIETLRQKAEAD 363 (448)
T ss_dssp -HTGGGCSEEEECSSCSSSSEEEEECSSSCCHHHHHHCCC-----------------CEEEEECTTCHHHHHHHHHHHHC
T ss_pred -HhcCcceEEEecCCCCCCCeEEEeCCcchhHHHHHHHHHhhc---cccccccccccCceeEECCCCHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999999999865 3333345677899999999999999999987766
Q ss_pred CChHHHHHHHHHHHHhccccCC
Q psy13239 161 PEDAKATEIATMMFQTGTLREG 182 (182)
Q Consensus 161 ~~~~~~~~~~~~lyd~All~~G 182 (182)
++++.++++|++|||+|+|++|
T Consensus 364 ~~~~~~~~~~~lLyd~AlL~~G 385 (448)
T 3q6m_A 364 KNDKSVKDLVILLYETALLSSG 385 (448)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTT
T ss_pred cchhHHHHHHHHHHHhHHhcCC
Confidence 7778899999999999999998
|
| >3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} | Back alignment and structure |
|---|
| >2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A | Back alignment and structure |
|---|
| >2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A | Back alignment and structure |
|---|
| >1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 | Back alignment and structure |
|---|
| >1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A | Back alignment and structure |
|---|
| >2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} | Back alignment and structure |
|---|
| >1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 | Back alignment and structure |
|---|
| >3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} SCOP: d.14.1.8 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 182 | ||||
| d1sf8a_ | 115 | d.271.1.1 (A:) Chaperone protein HtpG {Escherichia | 2e-16 | |
| d1usua_ | 256 | d.14.1.8 (A:) Heat shock protein hsp82 {Baker's ye | 8e-14 |
| >d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Length = 115 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HSP90 C-terminal domain superfamily: HSP90 C-terminal domain family: HSP90 C-terminal domain domain: Chaperone protein HtpG species: Escherichia coli [TaxId: 562]
Score = 69.5 bits (170), Expect = 2e-16
Identities = 19/109 (17%), Positives = 42/109 (38%), Gaps = 14/109 (12%)
Query: 74 LLKWLSEKALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKY 133
+ + L +++ ++ RL+D+P + + M +L + + +
Sbjct: 2 FIDRVKA-LLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPE------ 54
Query: 134 YLSQKKTMEVNPRHPLIRELYRRVKDDPEDAKATEIATMMFQTGTLREG 182
K E+NP H L++ D ++AK +E ++ L E
Sbjct: 55 ---VKYIFELNPDHVLVKRA----ADTEDEAKFSEWVELLLDQALLAER 96
|
| >d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 256 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 182 | |||
| d1sf8a_ | 115 | Chaperone protein HtpG {Escherichia coli [TaxId: 5 | 100.0 |
| >d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HSP90 C-terminal domain superfamily: HSP90 C-terminal domain family: HSP90 C-terminal domain domain: Chaperone protein HtpG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.7e-34 Score=211.88 Aligned_cols=95 Identities=19% Similarity=0.352 Sum_probs=86.4
Q ss_pred HHHHHHhhhhccccceEEEeecCCCCcEEEEecCCCCcHHHHHHHHHhhhhcCCChhhhhccCCCceEEEcCCChHHHHH
Q psy13239 74 LLKWLSEKALKDQIAKAEISERLSDSPCALVASMFGWTGNMERLAMSNAHQKADDPQRKYYLSQKKTMEVNPRHPLIREL 153 (182)
Q Consensus 74 L~~~~k~~~L~~~v~~V~vs~rL~~sPa~iv~~e~~~s~~M~r~m~~~~~~~~~~~~~~~~~~~k~~LEINp~HplI~~L 153 (182)
|++|+|+ +|+++|++|++|+||++|||||+++++|||++|||||++| |++ ++..++||||||+||||++|
T Consensus 2 l~~~~K~-~L~d~V~~V~~S~RL~~sP~~lv~~~~~~s~~M~kimk~~----~~~-----~~~~k~iLEiNp~H~lIk~l 71 (115)
T d1sf8a_ 2 FIDRVKA-LLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAA----GQK-----VPEVKYIFELNPDHVLVKRA 71 (115)
T ss_dssp HHHHHHH-HHGGGSSEEEECCCCSSCCEEEECCTTSCCHHHHHHHHTT----TSC-----CCCCCCEEEECTTSHHHHHH
T ss_pred HHHHHHH-HhcCcccEEeeccccccCceeeecCCcchHHHHHHHHHHh----ccc-----cccccceeeeCCCCHHHHHH
Confidence 8999999 9999999999999999999999999999999999999998 444 34578999999999999999
Q ss_pred HHhccCCCChHHHHHHHHHHHHhccccCC
Q psy13239 154 YRRVKDDPEDAKATEIATMMFQTGTLREG 182 (182)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~lyd~All~~G 182 (182)
.+. .+++.+++++++|||+|+|++|
T Consensus 72 ~~~----~~~~~~~~~~~~L~d~A~l~~G 96 (115)
T d1sf8a_ 72 ADT----EDEAKFSEWVELLLDQALLAER 96 (115)
T ss_dssp HHC----CSHHHHHHHHHHHHHHHHHHHH
T ss_pred Hhc----cchHHHHHHHHHHHHHHHHhCC
Confidence 753 5567899999999999999886
|