Psyllid ID: psy13271

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Protein Sequence
FQKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIESGSDCTLALGFEKMEKGSLGAKSKPVK
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHHHHcccccccccEEEEEEEcccccHHHHHHHHHcccccccEEEEcccccHHHHHHHHHHHHHccccEEEEEEEcccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHHHHHHHHHHHccccHHHHHEEEEEEEEccccccHHEEEEEcccccEEEEcccccccHHHHHHHHHHHHHccccEEEEEEEcccccccccccccccc
Coil and Loop (DISEMBL)
fqkpkedtdypELAKEALIKALDDAGISINQVQQACcgyvygdstcgqRALYQIGmtgipvfnvnnncstgsSALMLAKQFIESGSDCTLALGFEkmekgslgakskpvk
Flexible Loop (DISEMBL)
fqkpkedtdypELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIESGSDCTLALGFEkmekgslgakskpvk
Low Complexity Region (SEG)
FQKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIESGSDCTLALGFEKMEKGSLGAKSKPVK
Disordered region (IsUnstruct)
***************EALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIESGSDCTLALGF****************
Disordered Region (DISOPRED)
*Q*P**DTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIESGSDCTLALGFEKME************
Disordered Region (DISEMBL)
**********PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIESGSDCTLALGFEKME************
Disordered Region (DISPRO)
F***KEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIESGSDCTLALGFEKM*************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
FQKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIESGSDCTLALGFEKMEKGSLGAKSKPVK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	110	2.2.26 [Sep-21-2011]
Q07598	547	Non-specific lipid-transf	yes	N/A	0.945	0.190	0.644	3e-34
O62742	547	Non-specific lipid-transf	yes	N/A	0.954	0.191	0.642	2e-33
P11915	547	Non-specific lipid-transf	yes	N/A	0.954	0.191	0.633	1e-32
P32020	547	Non-specific lipid-transf	yes	N/A	0.954	0.191	0.623	1e-32
P22307	547	Non-specific lipid-transf	yes	N/A	0.954	0.191	0.633	3e-32
P07857	543	Non-specific lipid-transf	yes	N/A	0.990	0.200	0.603	1e-31

>sp|Q07598|NLTP_CHICK Non-specific lipid-transfer protein (Fragment) OS=Gallus gallus GN=SCP2 PE=2 SV=1

 Score =  143 bits (360), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 69/107 (64%), Positives = 87/107 (81%), Gaps = 3/107 (2%)

Query: 1   FQKPKEDT-DYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQ-IGMTG 58
           F KP E++ DYP+LAKEA  KAL DAGI  + V+QAC GYVYGDSTCGQRA+Y  +G+TG
Sbjct: 28  FAKPSENSVDYPDLAKEAGQKALADAGIPYSAVEQACVGYVYGDSTCGQRAIYHGLGLTG 87

Query: 59  IPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKGSLGA 104
           IP+ NVNNNC+TGS+AL +++Q +E G +DC LALGFE+M KGSL +
Sbjct: 88  IPIINVNNNCATGSTALFMSRQLVEGGLADCVLALGFERMAKGSLAS 134

Mediates in vitro the transfer of all common phospholipids, cholesterol and gangliosides between membranes. May play a role in regulating steroidogenesis.
Gallus gallus (taxid: 9031)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1EC: 7EC: 6

>sp|O62742|NLTP_RABIT Non-specific lipid-transfer protein OS=Oryctolagus cuniculus GN=SCP2 PE=1 SV=1

 Score =  141 bits (355), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 70/109 (64%), Positives = 87/109 (79%), Gaps = 4/109 (3%)

Query: 1   FQKP--KEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQ-IGMT 57
           F KP  ++  DYP++AKEA  KAL DA I  + V+QAC GYVYGDSTCGQRA+Y  +G+T
Sbjct: 24  FVKPGTEDARDYPDMAKEAGQKALADAQIPYSAVEQACIGYVYGDSTCGQRAVYHSLGLT 83

Query: 58  GIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKGSLGAK 105
           GIP+ NVNNNCSTGS+AL + +Q I+ G ++C LALGFEKME+GSLGAK
Sbjct: 84  GIPIINVNNNCSTGSTALFMGRQLIQGGMAECVLALGFEKMERGSLGAK 132

Mediates in vitro the transfer of all common phospholipids, cholesterol and gangliosides between membranes. May play a role in regulating steroidogenesis.

Oryctolagus cuniculus (taxid: 9986)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 6

>sp|P11915|NLTP_RAT Non-specific lipid-transfer protein OS=Rattus norvegicus GN=Scp2 PE=1 SV=3

 Score =  138 bits (348), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/109 (63%), Positives = 85/109 (77%), Gaps = 4/109 (3%)

Query: 1   FQKP--KEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQ-IGMT 57
           F KP  +   DYP+LAKEA  KAL D  I  + V+QAC GYVYG+STCGQRA+Y  +G+T
Sbjct: 24  FMKPGGENSRDYPDLAKEAGQKALADRQIPYSAVEQACVGYVYGESTCGQRAIYHSLGLT 83

Query: 58  GIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKGSLGAK 105
           GIP+ NVNNNCSTGS+AL +A+Q ++ G ++C LALGFEKMEKGSLG K
Sbjct: 84  GIPIINVNNNCSTGSTALFMAQQLVQGGLANCVLALGFEKMEKGSLGTK 132

Mediates in vitro the transfer of all common phospholipids, cholesterol and gangliosides between membranes. May play a role in regulating steroidogenesis.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 6

>sp|P32020|NLTP_MOUSE Non-specific lipid-transfer protein OS=Mus musculus GN=Scp2 PE=1 SV=3

 Score =  138 bits (347), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/109 (62%), Positives = 85/109 (77%), Gaps = 4/109 (3%)

Query: 1   FQKP--KEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQ-IGMT 57
           F KP  +   DYP++AKEA  KAL+DA I  + V+QAC GYVYGDST GQRA+Y  +G+T
Sbjct: 24  FMKPGGENSRDYPDMAKEAGQKALEDAQIPYSAVEQACVGYVYGDSTSGQRAIYHSLGLT 83

Query: 58  GIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKGSLGAK 105
           GIP+ NVNNNCSTGS+AL +A Q I+ G ++C LALGFEKME+GS+G K
Sbjct: 84  GIPIINVNNNCSTGSTALFMAHQLIQGGLANCVLALGFEKMERGSIGTK 132

Mediates in vitro the transfer of all common phospholipids, cholesterol and gangliosides between membranes. May play a role in regulating steroidogenesis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 6

>sp|P22307|NLTP_HUMAN Non-specific lipid-transfer protein OS=Homo sapiens GN=SCP2 PE=1 SV=2

 Score =  136 bits (343), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/109 (63%), Positives = 84/109 (77%), Gaps = 4/109 (3%)

Query: 1   FQKP--KEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQ-IGMT 57
           F KP  +   DYP+LA+EA  KAL DA I  + V QAC GYV+GDSTCGQRA+Y  +GMT
Sbjct: 24  FVKPGAENSRDYPDLAEEAGKKALADAQIPYSAVDQACVGYVFGDSTCGQRAIYHSLGMT 83

Query: 58  GIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKGSLGAK 105
           GIP+ NVNNNC+TGS+AL +A+Q I+ G ++C LALGFEKM KGSLG K
Sbjct: 84  GIPIINVNNNCATGSTALFMARQLIQGGVAECVLALGFEKMSKGSLGIK 132

Mediates in vitro the transfer of all common phospholipids, cholesterol and gangliosides between membranes. May play a role in regulating steroidogenesis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 6

>sp|P07857|NLTP_BOVIN Non-specific lipid-transfer protein OS=Bos taurus GN=SCP2 PE=1 SV=2

 Score =  134 bits (338), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 70/116 (60%), Positives = 86/116 (74%), Gaps = 7/116 (6%)

Query: 1   FQKPK-EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQ-IGMTG 58
           F KP  E+ DYP+LAKEA  KAL DA I  + V+QAC GYVYGDST GQRA+Y  +G+TG
Sbjct: 24  FTKPGVENRDYPDLAKEAGQKALADAQIPYSAVEQACIGYVYGDSTSGQRAIYHSLGLTG 83

Query: 59  IPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKGSLGA----KSKPV 109
           IP+ NVNNNCSTGS+AL +A+Q I+ G +DC LALGFEKM KG +      K+ P+
Sbjct: 84  IPIINVNNNCSTGSTALFMARQLIQGGLADCVLALGFEKMVKGPIAVNIQDKANPI 139

Mediates in vitro the transfer of all common phospholipids, cholesterol and gangliosides between membranes. May play a role in regulating steroidogenesis.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	110
449670340	576	PREDICTED: non-specific lipid-transfer p	0.954	0.182	0.703	6e-39
282165699	538	Sterol carrier protein X-related thiolas	0.954	0.195	0.700	1e-38
125985805	544	GA25964 [Drosophila pseudoobscura pseudo	0.954	0.193	0.740	2e-38
194760231	407	GF14486 [Drosophila ananassae] gi|190616	0.954	0.257	0.731	2e-38
195147962	544	GL19449 [Drosophila persimilis] gi|19410	0.954	0.193	0.740	2e-38
194760233	544	GF15421 [Drosophila ananassae] gi|190616	0.954	0.193	0.731	2e-38
198428552	396	PREDICTED: similar to sterol carrier pro	0.927	0.257	0.723	4e-38
194879982	407	GG21682 [Drosophila erecta] gi|190657528	0.954	0.257	0.722	4e-38
195579984	407	GD21807 [Drosophila simulans] gi|1941918	0.954	0.257	0.722	4e-38
170036555	544	nonspecific lipid-transfer protein [Cule	0.954	0.193	0.722	4e-38

>gi|449670340|ref|XP_002165358.2| PREDICTED: non-specific lipid-transfer protein-like, partial [Hydra magnipapillata]

 Score =  164 bits (415), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 76/108 (70%), Positives = 94/108 (87%), Gaps = 3/108 (2%)

Query: 1   FQKP--KEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG 58
           F+KP  ++D DYP + KEA+ +AL+DAGI+ N++QQA CGYVYGDSTCGQRALYQ G+TG
Sbjct: 1   FEKPGARKDFDYPVMVKEAVTQALNDAGITYNEIQQAVCGYVYGDSTCGQRALYQFGLTG 60

Query: 59  IPVFNVNNNCSTGSSALMLAKQFIESGS-DCTLALGFEKMEKGSLGAK 105
           IP+ NVNNNCSTGSSAL++AKQ IE G+ DC LA+GFEKME+GSLG+K
Sbjct: 61  IPILNVNNNCSTGSSALLMAKQLIEGGTADCVLAVGFEKMERGSLGSK 108

Source: Hydra magnipapillata

Species: Hydra magnipapillata

Genus: Hydra

Family: Hydridae

Order: Hydroida

Class: Hydrozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|282165699|ref|NP_001107796.2| Sterol carrier protein X-related thiolase [Tribolium castaneum] gi|270015166|gb|EFA11614.1| sterol carrier protein x [Tribolium castaneum]

 Score =  163 bits (412), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 75/107 (70%), Positives = 93/107 (86%), Gaps = 2/107 (1%)

Query: 1   FQKP-KEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGI 59
           F+KP K + DYP  AKEA++KALDD G+ I++V+ A CGYVYGDST GQRA+Y++GMTGI
Sbjct: 14  FEKPGKRNDDYPGFAKEAILKALDDCGVKISEVEAAACGYVYGDSTSGQRAVYEVGMTGI 73

Query: 60  PVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKGSLGAK 105
           P+FNVNNNCSTGS+AL+LAK+F+ESG  DC LA+GFEKME+GSL AK
Sbjct: 74  PIFNVNNNCSTGSTALLLAKEFVESGKHDCVLAVGFEKMERGSLSAK 120

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|125985805|ref|XP_001356666.1| GA25964 [Drosophila pseudoobscura pseudoobscura] gi|54644991|gb|EAL33731.1| GA25964 [Drosophila pseudoobscura pseudoobscura]

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 80/108 (74%), Positives = 89/108 (82%), Gaps = 3/108 (2%)

Query: 1   FQKPKEDTD--YPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG 58
           F+KP    D  YP+ AKEA+ KAL DA I   +VQQA  GYVYGDSTCGQRA+Y++GMTG
Sbjct: 16  FEKPGRRADVCYPDFAKEAITKALQDANIKYEEVQQAVTGYVYGDSTCGQRAVYEVGMTG 75

Query: 59  IPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKGSLGAK 105
           IPV+NVNNNCSTGSSAL LAKQ IESG SDC LALGFEKME+GSLGAK
Sbjct: 76  IPVYNVNNNCSTGSSALYLAKQIIESGTSDCVLALGFEKMERGSLGAK 123

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194760231|ref|XP_001962345.1| GF14486 [Drosophila ananassae] gi|190616042|gb|EDV31566.1| GF14486 [Drosophila ananassae]

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 79/108 (73%), Positives = 89/108 (82%), Gaps = 3/108 (2%)

Query: 1   FQKPKEDTD--YPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG 58
           F+KP    D  YP+ AKEA+ KAL DAGI   +VQQA  GYVYGDSTCGQRA+Y++GMTG
Sbjct: 16  FEKPGRRADVCYPDFAKEAITKALSDAGIKFEEVQQAVAGYVYGDSTCGQRAIYEVGMTG 75

Query: 59  IPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKGSLGAK 105
           IPV+NVNNNCSTGSSAL LAKQ IESG SDC LALGFEKME+GSL +K
Sbjct: 76  IPVYNVNNNCSTGSSALYLAKQIIESGNSDCVLALGFEKMERGSLSSK 123

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195147962|ref|XP_002014943.1| GL19449 [Drosophila persimilis] gi|194106896|gb|EDW28939.1| GL19449 [Drosophila persimilis]

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 80/108 (74%), Positives = 89/108 (82%), Gaps = 3/108 (2%)

Query: 1   FQKPKEDTD--YPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG 58
           F+KP    D  YP+ AKEA+ KAL DA I   +VQQA  GYVYGDSTCGQRA+Y++GMTG
Sbjct: 16  FEKPGRRADVCYPDFAKEAITKALQDANIKYEEVQQAVTGYVYGDSTCGQRAVYEVGMTG 75

Query: 59  IPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKGSLGAK 105
           IPV+NVNNNCSTGSSAL LAKQ IESG SDC LALGFEKME+GSLGAK
Sbjct: 76  IPVYNVNNNCSTGSSALYLAKQIIESGTSDCVLALGFEKMERGSLGAK 123

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194760233|ref|XP_001962346.1| GF15421 [Drosophila ananassae] gi|190616043|gb|EDV31567.1| GF15421 [Drosophila ananassae]

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 79/108 (73%), Positives = 89/108 (82%), Gaps = 3/108 (2%)

Query: 1   FQKPKEDTD--YPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG 58
           F+KP    D  YP+ AKEA+ KAL DAGI   +VQQA  GYVYGDSTCGQRA+Y++GMTG
Sbjct: 16  FEKPGRRADVCYPDFAKEAITKALSDAGIKFEEVQQAVAGYVYGDSTCGQRAIYEVGMTG 75

Query: 59  IPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKGSLGAK 105
           IPV+NVNNNCSTGSSAL LAKQ IESG SDC LALGFEKME+GSL +K
Sbjct: 76  IPVYNVNNNCSTGSSALYLAKQIIESGNSDCVLALGFEKMERGSLSSK 123

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198428552|ref|XP_002120864.1| PREDICTED: similar to sterol carrier protein 2 [Ciona intestinalis]

 Score =  161 bits (408), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 76/105 (72%), Positives = 93/105 (88%), Gaps = 3/105 (2%)

Query: 1   FQKP--KEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG 58
           F+KP  +E+ DYP++AKEA +KAL DAGIS +QV+QA  GY YGDSTCGQRALYQ+GMTG
Sbjct: 15  FEKPGRRENFDYPDMAKEAGLKALADAGISYHQVEQAAVGYCYGDSTCGQRALYQLGMTG 74

Query: 59  IPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKGSL 102
           IP++NVNNNCSTGS+AL +AKQFIE G ++CT+ALGFEKME+GSL
Sbjct: 75  IPIYNVNNNCSTGSTALFMAKQFIEGGLAECTMALGFEKMERGSL 119

Source: Ciona intestinalis

Species: Ciona intestinalis

Genus: Ciona

Family: Cionidae

Order: Enterogona

Class: Ascidiacea

Phylum: Chordata

Superkingdom: Eukaryota

>gi|194879982|ref|XP_001974341.1| GG21682 [Drosophila erecta] gi|190657528|gb|EDV54741.1| GG21682 [Drosophila erecta]

 Score =  161 bits (408), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 78/108 (72%), Positives = 89/108 (82%), Gaps = 3/108 (2%)

Query: 1   FQKPKEDTD--YPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG 58
           F+KP    D  YP+ AKEA+ KAL DAGI   +VQQA  GYVYGDSTCGQRA+Y++GMTG
Sbjct: 16  FEKPGRRADVCYPDFAKEAITKALQDAGIKFEEVQQAVAGYVYGDSTCGQRAIYEVGMTG 75

Query: 59  IPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKGSLGAK 105
           IPV+NVNNNCSTGSSAL LAKQ +ESG SDC LALGFEKME+GSL +K
Sbjct: 76  IPVYNVNNNCSTGSSALYLAKQIVESGNSDCVLALGFEKMERGSLSSK 123

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195579984|ref|XP_002079836.1| GD21807 [Drosophila simulans] gi|194191845|gb|EDX05421.1| GD21807 [Drosophila simulans]

 Score =  161 bits (408), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 78/108 (72%), Positives = 89/108 (82%), Gaps = 3/108 (2%)

Query: 1   FQKPKEDTD--YPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG 58
           F+KP    D  YP+ AKEA+ KAL DAGI   +VQQA  GYVYGDSTCGQRA+Y++GMTG
Sbjct: 16  FEKPGRRADVCYPDFAKEAITKALQDAGIKFEEVQQAVAGYVYGDSTCGQRAIYEVGMTG 75

Query: 59  IPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKGSLGAK 105
           IPV+NVNNNCSTGSSAL LAKQ +ESG SDC LALGFEKME+GSL +K
Sbjct: 76  IPVYNVNNNCSTGSSALYLAKQIVESGNSDCVLALGFEKMERGSLSSK 123

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170036555|ref|XP_001846129.1| nonspecific lipid-transfer protein [Culex quinquefasciatus] gi|167879197|gb|EDS42580.1| nonspecific lipid-transfer protein [Culex quinquefasciatus]

 Score =  161 bits (408), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 78/108 (72%), Positives = 92/108 (85%), Gaps = 3/108 (2%)

Query: 1   FQKP--KEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG 58
           F+KP  +ED DYP++AKEA+ KAL+DA I    VQQA  GYVYGDSTCGQRALY+IG TG
Sbjct: 16  FEKPGRREDFDYPQMAKEAVTKALNDARIKYQDVQQATVGYVYGDSTCGQRALYEIGFTG 75

Query: 59  IPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKGSLGAK 105
           IPV+NVNNNCSTGS+AL+LAKQ IE+G +DC LALGFEKME+GSL +K
Sbjct: 76  IPVYNVNNNCSTGSTALLLAKQLIETGNNDCVLALGFEKMERGSLTSK 123

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q07598	NLTP_CHICK	2, ., 3, ., 1, ., 1, 7, 6	0.6448	0.9454	0.1901	yes	N/A
P32020	NLTP_MOUSE	2, ., 3, ., 1, ., 1, 7, 6	0.6238	0.9545	0.1919	yes	N/A
P22307	NLTP_HUMAN	2, ., 3, ., 1, ., 1, 7, 6	0.6330	0.9545	0.1919	yes	N/A
P11915	NLTP_RAT	2, ., 3, ., 1, ., 1, 7, 6	0.6330	0.9545	0.1919	yes	N/A
P07857	NLTP_BOVIN	2, ., 3, ., 1, ., 1, 7, 6	0.6034	0.9909	0.2007	yes	N/A
O62742	NLTP_RABIT	2, ., 3, ., 1, ., 1, 7, 6	0.6422	0.9545	0.1919	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	110
PRK08256	391	PRK08256, PRK08256, lipid-transfer protein; Provis	3e-61
cd00829	375	cd00829, SCP-x_thiolase, Thiolase domain associate	1e-30
cd00826	393	cd00826, nondecarbox_cond_enzymes, nondecarboxylat	1e-22
cd00327	254	cd00327, cond_enzymes, Condensing enzymes; Family	3e-20
COG0183	392	COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid	1e-13
PRK06064	389	PRK06064, PRK06064, acetyl-CoA acetyltransferase;	3e-11
PRK06157	398	PRK06157, PRK06157, acetyl-CoA acetyltransferase;	2e-10
cd00751	386	cd00751, thiolase, Thiolase are ubiquitous enzymes	4e-08
PRK12578	385	PRK12578, PRK12578, acetyl-CoA acetyltransferase;	2e-07
cd00827	324	cd00827, init_cond_enzymes, "initiating" condensin	3e-07
COG0332	323	COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein]	4e-07
PRK06365	430	PRK06365, PRK06365, acetyl-CoA acetyltransferase;	4e-07
PRK06059	399	PRK06059, PRK06059, lipid-transfer protein; Provis	8e-06
pfam00108	262	pfam00108, Thiolase_N, Thiolase, N-terminal domain	1e-05
cd00830	320	cd00830, KAS_III, Ketoacyl-acyl carrier protein sy	1e-05
TIGR00747	318	TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein)	2e-05
PRK07516	389	PRK07516, PRK07516, acetyl-CoA acetyltransferase;	2e-05
PRK05790	393	PRK05790, PRK05790, putative acyltransferase; Prov	4e-05
PLN02644	394	PLN02644, PLN02644, acetyl-CoA C-acetyltransferase	5e-05
PRK06289	403	PRK06289, PRK06289, acetyl-CoA acetyltransferase;	8e-05
TIGR01930	386	TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltrans	2e-04
PRK09352	319	PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protei	3e-04
CHL00203	326	CHL00203, fabH, 3-oxoacyl-acyl-carrier-protein syn	0.002
PRK08313	386	PRK08313, PRK08313, acetyl-CoA acetyltransferase;	0.003
PRK06366	388	PRK06366, PRK06366, acetyl-CoA acetyltransferase;	0.003

>gnl|CDD|181327 PRK08256, PRK08256, lipid-transfer protein; Provisional

 Score =  191 bits (487), Expect = 3e-61
 Identities = 68/106 (64%), Positives = 83/106 (78%), Gaps = 1/106 (0%)

Query: 1   FQKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIP 60
           F+KP    DYP++A EA   AL DAGI  + VQQA  GYVYGDST GQRALY++GMTGIP
Sbjct: 13  FEKPGASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTSGQRALYEVGMTGIP 72

Query: 61  VFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKGSLGAK 105
           + NVNNNCSTGS+AL LA+Q + SG +DC LALGFE+M+ G+LG+ 
Sbjct: 73  IVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSV 118

Length = 391

>gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism

 Score =  110 bits (278), Expect = 1e-30
 Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 5/109 (4%)

Query: 1   FQKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGD---STCGQRALYQIGMT 57
           F +   D    ELA EA   ALDDAG+    +     G   G    S  G      +G+ 
Sbjct: 8   FGRR-SDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL 66

Query: 58  GIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKGSLGAK 105
           G P   V    ++GS+A+  A   I SG +D  L +G EKM     G +
Sbjct: 67  GKPATRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDE 115

The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375

>gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

 Score = 89.9 bits (222), Expect = 1e-22
 Identities = 40/99 (40%), Positives = 52/99 (52%), Gaps = 9/99 (9%)

Query: 9   DYPELAKEALIKALDDA----GISINQVQQACCGYVYGD---STCGQRALYQ-IGMTGIP 60
           D  +LA EA  KA+  A    G++   V++AC G V G      C Q+A     G+   P
Sbjct: 18  DANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAP 77

Query: 61  VFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKME 98
              +NN C +G  AL LA Q I  G ++C LA GFEKME
Sbjct: 78  AIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKME 116

There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 393

>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

 Score = 81.7 bits (202), Expect = 3e-20
 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 4/90 (4%)

Query: 11 PELAKEALIKALDDAGISINQVQQACCGYVYGD---STCGQRALYQIGMTGIPVFNVNNN 67
           EL  EA  +A+ DAG+S   +     G   G    S    +  Y +G++G P ++VN  
Sbjct: 8  SELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGPAYSVNQA 67

Query: 68 CSTGSSALMLAKQFIESG-SDCTLALGFEK 96
          C+TG +AL LA Q +++G +D  LA G E+
Sbjct: 68 CATGLTALALAVQQVQNGKADIVLAGGSEE 97

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254

>gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism]

 Score = 65.0 bits (159), Expect = 1e-13
 Identities = 39/104 (37%), Positives = 48/104 (46%), Gaps = 13/104 (12%)

Query: 7   DTDYPELAKEALIKALDDAGISIN-------QVQQACCGYVYGDSTCGQ----RALYQIG 55
           D    ELA EAL  AL DAG+           V     G V      GQ    +A    G
Sbjct: 19  DGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAG 78

Query: 56  MTG-IPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKM 97
           + G +P   VN  C++G +A+ LA Q I SG +D  LA G EKM
Sbjct: 79  LPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKM 122

Length = 392

>gnl|CDD|235688 PRK06064, PRK06064, acetyl-CoA acetyltransferase; Provisional

 Score = 58.4 bits (142), Expect = 3e-11
 Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 7   DTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQI-----GMTGIPV 61
           D    +LA EA ++AL+DAGI    +     G +       Q  +  +     G+  IP 
Sbjct: 19  DVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLAPIPA 78

Query: 62  FNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKM 97
             V   C++G +AL  A   + SG +D  LA G EKM
Sbjct: 79  TRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKM 115

Length = 389

>gnl|CDD|180433 PRK06157, PRK06157, acetyl-CoA acetyltransferase; Validated

 Score = 55.4 bits (134), Expect = 2e-10
 Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 4/95 (4%)

Query: 7   DTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRAL---YQIGMTGIPVFN 63
           D    +L  EA ++AL DAGI    +  A  G  Y +   G+        + +  IPV  
Sbjct: 24  DAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLPNIPVTR 83

Query: 64  VNNNCSTGSSALMLAKQFIESGS-DCTLALGFEKM 97
           V N C+TGS A   A   + SG+ D  LALG EK+
Sbjct: 84  VENFCATGSEAFRGAVYAVASGAYDIALALGVEKL 118

Length = 398

>gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

 Score = 49.4 bits (119), Expect = 4e-08
 Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 7/93 (7%)

Query: 11  PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGM-TGIPV----FNVN 65
            +L    +   L+ AG+   +V     G V   +  GQ    Q  +  G+P       VN
Sbjct: 23  DDLGAAVIKALLERAGLDPEEVDDVIMGNVLQ-AGEGQNPARQAALLAGLPESVPATTVN 81

Query: 66  NNCSTGSSALMLAKQFIESG-SDCTLALGFEKM 97
             C +G  A+ LA Q I +G +D  +A G E M
Sbjct: 82  RVCGSGLQAVALAAQSIAAGEADVVVAGGVESM 114

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386

>gnl|CDD|183606 PRK12578, PRK12578, acetyl-CoA acetyltransferase; Provisional

 Score = 47.1 bits (112), Expect = 2e-07
 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 16/103 (15%)

Query: 5   KEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRA--LYQI-------G 55
           ++D    ELA E++ +AL+DAG+S   ++    G      +   R   LY         G
Sbjct: 16  RDDVSVQELAWESIKEALNDAGVSQTDIELVVVG------STAYRGIELYPAPIVAEYSG 69

Query: 56  MTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKM 97
           +TG     V   C+TG +A + A   + SG  D  +A+G +KM
Sbjct: 70  LTGKVPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKM 112

Length = 385

>gnl|CDD|238423 cd00827, init_cond_enzymes, "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes

 Score = 46.7 bits (111), Expect = 3e-07
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 6   EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQI----GMTGIPV 61
           +D D P +A EA  +AL+ AGI  + +              G+ A   +    G+T    
Sbjct: 44  DDEDVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDK-GKSAATYLAELLGLTNAEA 102

Query: 62  FNVNNNCSTGSSALMLAKQFIESGSD 87
           F++   C  G++AL LA   +ESG  
Sbjct: 103 FDLKQACYGGTAALQLAANLVESGPW 128

They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. Length = 324

>gnl|CDD|223409 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein]

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 3/78 (3%)

Query: 12  ELAKEALIKALDDAGISINQVQQACCGYVYGDSTC---GQRALYQIGMTGIPVFNVNNNC 68
           +LA EA  KAL+DAGIS + +          D            ++G+ G P F++   C
Sbjct: 54  DLAVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLGGAPAFDLQAAC 113

Query: 69  STGSSALMLAKQFIESGS 86
           S    AL +A   I SG 
Sbjct: 114 SGFLYALSVADGLIRSGG 131

Length = 323

>gnl|CDD|235785 PRK06365, PRK06365, acetyl-CoA acetyltransferase; Provisional

 Score = 46.4 bits (110), Expect = 4e-07
 Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 7/105 (6%)

Query: 1   FQKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQ---RALYQ--IG 55
           F K     D+ E  K+A   A++DAG+++  +  +   Y + D    Q     + Q  +G
Sbjct: 28  FDKASPYMDFRERVKKAFDYAMNDAGLTLADIDGSVASY-FSDHFQRQLLAGIMVQDYLG 86

Query: 56  MTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEK 99
           +   P   +    +TG  A     + I SG  DC    GFE M  
Sbjct: 87  LVPKPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSH 131

Length = 430

>gnl|CDD|180373 PRK06059, PRK06059, lipid-transfer protein; Provisional

 Score = 42.4 bits (100), Expect = 8e-06
 Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 15/102 (14%)

Query: 9   DYPELAKEALIKALDDAGISINQVQ---------QACCGYVYGDSTCGQRALYQIGMTGI 59
           D+ E    A   AL DAG+    VQ             G+V G +T  Q     +G  G 
Sbjct: 22  DFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAG-ATFAQA----LGWNGA 76

Query: 60  PVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKG 100
           PV +    C++GS AL  A+  I +G  D  L +G +   KG
Sbjct: 77  PVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKG 118

Length = 399

>gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 7/97 (7%)

Query: 7   DTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIG-MTGIPV---- 61
           D    +L   A+  AL+ AG+    V +   G V   +  GQ    Q     GIP     
Sbjct: 21  DLSAVDLGAIAIKAALERAGVKPEDVDEVIMGNVL-QAGEGQNPARQAALKAGIPDSVPA 79

Query: 62  FNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKM 97
             +N  C +G  A+ LA Q I +G +D  +A G E M
Sbjct: 80  VTINKVCGSGLKAVALAAQAIRAGDADIVVAGGVESM 116

Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262

>gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 25/102 (24%), Positives = 38/102 (37%), Gaps = 24/102 (23%)

Query: 12  ELAKEALIKALDDAGISINQVQQACCGYVYGD-----STCGQRAL--------YQIGMTG 58
           +LA EA  KAL+DAGI  + +          D     ++               ++G   
Sbjct: 52  DLAVEAAKKALEDAGIDADDI----------DLIIVATSTPDYLFPATACLVQARLGAKN 101

Query: 59  IPVFNVNNNCSTGSSALMLAKQFIESGS-DCTLALGFEKMEK 99
              F++N  CS     L  A   I SG     L +G E + +
Sbjct: 102 AAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSR 143

It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. Length = 320

>gnl|CDD|233113 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) synthase III

 Score = 41.6 bits (98), Expect = 2e-05
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 8/91 (8%)

Query: 13  LAKEALIKALDDAGISINQ-----VQQACCGYVYGDSTCGQRALYQIGMTGIPVFNVNNN 67
           +  EA  +A+++AGIS +      V      + +  + C  +A   +G+ GIP F+++  
Sbjct: 54  MGFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQA--YLGIKGIPAFDLSAA 111

Query: 68  CSTGSSALMLAKQFIESGS-DCTLALGFEKM 97
           C+    AL +AKQ+IESG     L +G EK+
Sbjct: 112 CAGFIYALSVAKQYIESGKYKTVLVVGAEKL 142

FabH in general initiate elongation in type II fatty acid synthase systems found in bacteria and plants. The two members of this subfamily from Bacillus subtilis differ from each other, and from FabH from E. coli, in acyl group specificity. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 318

>gnl|CDD|181013 PRK07516, PRK07516, acetyl-CoA acetyltransferase; Provisional

 Score = 41.5 bits (98), Expect = 2e-05
 Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 11/93 (11%)

Query: 16  EALI-----KALDDAGISINQVQ-----QACCGYVYGDSTCGQRALYQIGMTGIPVFNVN 65
           E+LI     +AL  AGI+   V          G+   D            +   P   V 
Sbjct: 23  ESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALRFKPATRVE 82

Query: 66  NNCSTGSSALMLAKQFIESG-SDCTLALGFEKM 97
           N C+TGS+A+  A   IE+G +   L +G EKM
Sbjct: 83  NACATGSAAVYAALDAIEAGRARIVLVVGAEKM 115

Length = 389

>gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional

 Score = 40.5 bits (96), Expect = 4e-05
 Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 7/93 (7%)

Query: 11  PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGM-TGIPV----FNVN 65
            EL    +  AL+ AG+   QV +   G V   +  GQ    Q  +  G+PV      +N
Sbjct: 27  VELGAIVIKAALERAGVPPEQVDEVIMGQVLQ-AGAGQNPARQAALKAGLPVEVPALTIN 85

Query: 66  NNCSTGSSALMLAKQFIESG-SDCTLALGFEKM 97
             C +G  A+ LA Q I +G +D  +A G E M
Sbjct: 86  KVCGSGLKAVALAAQAIRAGDADIVVAGGQESM 118

Length = 393

>gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase

 Score = 40.1 bits (94), Expect = 5e-05
 Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 13/96 (13%)

Query: 11  PELAKEALIKALDDAGISINQVQQACCGYV----YGDSTCGQRALYQIGMTGIP----VF 62
            EL   A+  AL+ AG+    VQ+   G V     G +   Q AL      G+P      
Sbjct: 26  TELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAAL----GAGLPPSTICT 81

Query: 63  NVNNNCSTGSSALMLAKQFIESGS-DCTLALGFEKM 97
            VN  C++G  A+MLA Q I+ G  D  +A G E M
Sbjct: 82  TVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESM 117

Length = 394

>gnl|CDD|235771 PRK06289, PRK06289, acetyl-CoA acetyltransferase; Provisional

 Score = 39.7 bits (93), Expect = 8e-05
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 7/100 (7%)

Query: 5   KEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQR------ALYQIGMTG 58
           KE  D+ +L +E +   L  AG+  + ++    G  +G+   GQ       A     + G
Sbjct: 21  KEGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHPALWG 80

Query: 59  IPVFNVNNNCSTGSSALMLAKQFIESGS-DCTLALGFEKM 97
           +P       C++GS A + A   + +G  D  L +G E M
Sbjct: 81  VPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELM 120

Length = 403

>gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases

 Score = 38.4 bits (90), Expect = 2e-04
 Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 5/91 (5%)

Query: 12  ELAKEALIKALDDAGISINQVQQACCGYVY---GDSTCGQRALYQIGM-TGIPVFNVNNN 67
           +L    + + L+   +    +     G V          ++A    G+   +P + VN  
Sbjct: 23  DLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVNRQ 82

Query: 68  CSTGSSALMLAKQFIESG-SDCTLALGFEKM 97
           C++G  A++LA Q I +G +D  +A G E M
Sbjct: 83  CASGLQAVILAAQLIRAGEADVVVAGGVESM 113

This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatty acid oxidation [Fatty acid and phospholipid metabolism, Other]. Length = 386

>gnl|CDD|236475 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

 Score = 37.7 bits (89), Expect = 3e-04
 Identities = 32/101 (31%), Positives = 40/101 (39%), Gaps = 12/101 (11%)

Query: 4   PKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG------QRALYQIGMT 57
           P E T    LA EA  KAL+ AGI    +          D          Q  L   G  
Sbjct: 48  PDETTSD--LATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARL---GAK 102

Query: 58  GIPVFNVNNNCSTGSSALMLAKQFIESGS-DCTLALGFEKM 97
               F+++  CS    AL  A QFI SG+    L +G EK+
Sbjct: 103 NAAAFDLSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKL 143

Length = 319

>gnl|CDD|164577 CHL00203, fabH, 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional

 Score = 35.7 bits (82), Expect = 0.002
 Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 3/106 (2%)

Query: 7   DTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQ--IGMTGIPVFNV 64
            T   +LA EA  KALD A +   ++          D   G  +  Q  IG T    F++
Sbjct: 48  STSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGATRAVAFDI 107

Query: 65  NNNCSTGSSALMLAKQFIESGS-DCTLALGFEKMEKGSLGAKSKPV 109
              CS    AL+ A QFI++GS    L +G + + K    +  K  
Sbjct: 108 TAACSGFILALVTATQFIQNGSYKNILVVGADTLSKWIDWSDRKTC 153

Length = 326

>gnl|CDD|181378 PRK08313, PRK08313, acetyl-CoA acetyltransferase; Provisional

 Score = 35.5 bits (82), Expect = 0.003
 Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 16/116 (13%)

Query: 5   KEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYG------DSTCGQRALY---QIG 55
           ++D     L +EA+ +AL DAG++ + +       V G      +       L+    +G
Sbjct: 19  RQDVSMAGLVREAIDRALADAGLTWDDID----AVVVGKAPDFFEGVM-MPELFLADALG 73

Query: 56  MTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKM-EKGSLGAKSKPV 109
            TG P+  V+   S G S  ++A   ++SG     LA+ +EK  E  ++ A S PV
Sbjct: 74  ATGKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPV 129

Length = 386

>gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional

 Score = 35.4 bits (81), Expect = 0.003
 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 5/92 (5%)

Query: 11  PELAKEALIKALDDAGISINQVQQACCGYVY----GDSTCGQRALYQIGMTGIPVFNVNN 66
           P+L   A+   +DDA +    VQ+   G V     G +  GQ A +     G+  + VN 
Sbjct: 27  PQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVNV 86

Query: 67  NCSTGSSALMLAKQFIESGS-DCTLALGFEKM 97
            C++G  A+  A + I  G  D  +A G E M
Sbjct: 87  VCASGMLAVESAAREIMLGERDLVIAGGMENM 118

Length = 388

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	110
COG0332	323	FabH 3-oxoacyl-[acyl-carrier-protein]	99.84
PRK08235	393	acetyl-CoA acetyltransferase; Provisional	99.81
PF00108	264	Thiolase_N: Thiolase, N-terminal domain; InterPro:	99.81
PRK05656	393	acetyl-CoA acetyltransferase; Provisional	99.8
PRK07108	392	acetyl-CoA acetyltransferase; Provisional	99.8
PRK09051	394	beta-ketothiolase; Provisional	99.79
PRK07850	387	acetyl-CoA acetyltransferase; Provisional	99.79
PRK06205	404	acetyl-CoA acetyltransferase; Provisional	99.79
PRK12578	385	acetyl-CoA acetyltransferase; Provisional	99.79
PRK08242	402	acetyl-CoA acetyltransferase; Validated	99.79
cd00751	386	thiolase Thiolase are ubiquitous enzymes that cata	99.78
PRK08131	401	acetyl-CoA acetyltransferase; Provisional	99.78
PRK09052	399	acetyl-CoA acetyltransferase; Provisional	99.78
PRK08963	428	fadI 3-ketoacyl-CoA thiolase; Reviewed	99.77
PRK06157	398	acetyl-CoA acetyltransferase; Validated	99.77
PRK13359	400	beta-ketoadipyl CoA thiolase; Provisional	99.77
PRK06954	397	acetyl-CoA acetyltransferase; Provisional	99.76
TIGR02446	430	FadI fatty oxidation complex, beta subunit FadI. T	99.76
PRK06504	390	acetyl-CoA acetyltransferase; Provisional	99.75
PRK06633	392	acetyl-CoA acetyltransferase; Provisional	99.75
cd00829	375	SCP-x_thiolase Thiolase domain associated with ste	99.75
TIGR01930	386	AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi	99.75
PRK09050	401	beta-ketoadipyl CoA thiolase; Validated	99.75
TIGR02845	327	spore_V_AD stage V sporulation protein AD. Bacillu	99.75
PRK08256	391	lipid-transfer protein; Provisional	99.75
PLN02287	452	3-ketoacyl-CoA thiolase	99.75
PRK07661	391	acetyl-CoA acetyltransferase; Provisional	99.74
PRK05790	393	putative acyltransferase; Provisional	99.74
TIGR02430	400	pcaF beta-ketoadipyl CoA thiolase. Members of this	99.74
PTZ00455	438	3-ketoacyl-CoA thiolase; Provisional	99.74
PRK08313	386	acetyl-CoA acetyltransferase; Provisional	99.74
PRK06366	388	acetyl-CoA acetyltransferase; Provisional	99.74
PRK07516	389	acetyl-CoA acetyltransferase; Provisional	99.74
PRK08170	426	acetyl-CoA acetyltransferase; Provisional	99.74
cd00826	393	nondecarbox_cond_enzymes nondecarboxylating conden	99.73
PRK07851	406	acetyl-CoA acetyltransferase; Provisional	99.73
PRK06289	403	acetyl-CoA acetyltransferase; Provisional	99.73
PRK08304	337	stage V sporulation protein AD; Validated	99.73
PRK06064	389	acetyl-CoA acetyltransferase; Provisional	99.73
CHL00203	326	fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr	99.73
PRK06365	430	acetyl-CoA acetyltransferase; Provisional	99.73
PRK06065	392	acetyl-CoA acetyltransferase; Provisional	99.72
PRK12879	325	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.72
PRK06059	399	lipid-transfer protein; Provisional	99.71
PRK06816	378	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.71
PLN02326	379	3-oxoacyl-[acyl-carrier-protein] synthase III	99.71
PRK05963	326	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.71
PRK12880	353	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.71
PRK09258	338	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.71
PRK09352	319	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.71
PLN02644	394	acetyl-CoA C-acetyltransferase	99.7
TIGR00748	345	HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase	99.7
PRK09268	427	acetyl-CoA acetyltransferase; Provisional	99.7
PRK07204	329	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.7
TIGR00747	318	fabH 3-oxoacyl-(acyl-carrier-protein) synthase III	99.69
PRK06025	417	acetyl-CoA acetyltransferase; Provisional	99.69
PRK06445	394	acetyl-CoA acetyltransferase; Provisional	99.69
TIGR02445	385	fadA fatty oxidation complex, beta subunit FadA. T	99.68
cd00830	320	KAS_III Ketoacyl-acyl carrier protein synthase III	99.68
PRK08947	387	fadA 3-ketoacyl-CoA thiolase; Reviewed	99.68
PRK06158	384	thiolase; Provisional	99.67
cd00827	324	init_cond_enzymes "initiating" condensing enzymes	99.66
PRK07801	382	acetyl-CoA acetyltransferase; Provisional	99.65
PLN03168	389	chalcone synthase; Provisional	99.65
PLN02932	478	3-ketoacyl-CoA synthase	99.65
PRK04262	347	hypothetical protein; Provisional	99.65
PRK12404	334	stage V sporulation protein AD; Provisional	99.65
cd00327	254	cond_enzymes Condensing enzymes; Family of enzymes	99.64
PRK06690	361	acetyl-CoA acetyltransferase; Provisional	99.64
PRK06840	339	hypothetical protein; Validated	99.63
PRK07515	372	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.62
PRK08142	388	acetyl-CoA acetyltransferase; Provisional	99.61
cd00831	361	CHS_like Chalcone and stilbene synthases; plant-sp	99.61
PLN02377	502	3-ketoacyl-CoA synthase	99.61
PLN02577	459	hydroxymethylglutaryl-CoA synthase	99.6
PLN03171	399	chalcone synthase-like protein; Provisional	99.6
PLN03169	391	chalcone synthase family protein; Provisional	99.58
PLN03170	401	chalcone synthase; Provisional	99.58
PLN03172	393	chalcone synthase family protein; Provisional	99.56
PLN03173	391	chalcone synthase; Provisional	99.56
PRK07855	386	lipid-transfer protein; Provisional	99.55
PLN02192	511	3-ketoacyl-CoA synthase	99.55
cd00825	332	decarbox_cond_enzymes decarboxylating condensing e	99.55
KOG1406|consensus	408		99.53
TIGR01835	379	HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt	99.53
PRK06066	385	acetyl-CoA acetyltransferase; Provisional	99.52
TIGR01833	454	HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth	99.52
COG0183	392	PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis	99.51
PLN02854	521	3-ketoacyl-CoA synthase	99.5
PRK08257	498	acetyl-CoA acetyltransferase; Validated	99.5
smart00825	424	PKS_KS Beta-ketoacyl synthase. The structure of be	99.46
PLN00415	466	3-ketoacyl-CoA synthase	99.43
cd00834	406	KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP)	99.42
KOG1390|consensus	396		99.42
KOG1391|consensus	396		99.42
PRK07314	411	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.4
cd00828	407	elong_cond_enzymes "elongating" condensing enzymes	99.39
PF08392	290	FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-	99.39
PTZ00050	421	3-oxoacyl-acyl carrier protein synthase; Provision	99.39
TIGR03150	407	fabF beta-ketoacyl-acyl-carrier-protein synthase I	99.39
cd00833	421	PKS polyketide synthases (PKSs) polymerize simple	99.36
PRK06333	424	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.36
PF00195	226	Chal_sti_synt_N: Chalcone and stilbene synthases,	99.34
PRK07937	352	lipid-transfer protein; Provisional	99.33
PRK08439	406	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.33
PF00109	254	ketoacyl-synt: Beta-ketoacyl synthase, N-terminal	99.32
PRK08722	414	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.31
PLN02836	437	3-oxoacyl-[acyl-carrier-protein] synthase	99.3
PRK07967	406	3-oxoacyl-(acyl carrier protein) synthase I; Revie	99.28
PRK06147	348	3-oxoacyl-(acyl carrier protein) synthase; Validat	99.26
PRK06519	398	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.25
COG3425	377	PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi	99.24
PRK14691	342	3-oxoacyl-(acyl carrier protein) synthase II; Prov	99.2
PLN02787	540	3-oxoacyl-[acyl-carrier-protein] synthase II	99.19
PRK09116	405	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.19
PRK07103	410	polyketide beta-ketoacyl:acyl carrier protein synt	99.16
PF01154	174	HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s	99.14
cd00832	399	CLF Chain-length factor (CLF) is a factor required	99.12
PRK06501	425	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.09
COG3321	1061	Polyketide synthase modules and related proteins [	99.09
PRK07910	418	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.08
PRK05952	381	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.04
COG3424	356	BcsA Predicted naringenin-chalcone synthase [Secon	99.04
COG0304	412	FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li	99.01
KOG1389|consensus	435		99.01
KOG1392|consensus	465		98.98
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.97
KOG1394|consensus	440		98.96
PF07451	329	SpoVAD: Stage V sporulation protein AD (SpoVAD); I	98.91
PRK09185	392	3-oxoacyl-(acyl carrier protein) synthase I; Revie	98.7
PF08545	80	ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)	98.64
KOG1202|consensus	2376		98.53
PF13723	218	Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina	97.26
KOG1393|consensus	462		97.01
PF08541	90	ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC	95.99
PRK06147	348	3-oxoacyl-(acyl carrier protein) synthase; Validat	95.6
TIGR00748	345	HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase	95.27
PF02801	119	Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina	95.26
PRK06816	378	3-oxoacyl-(acyl carrier protein) synthase III; Rev	94.64
PRK08257	498	acetyl-CoA acetyltransferase; Validated	94.11
cd00832	399	CLF Chain-length factor (CLF) is a factor required	93.99
PRK09258	338	3-oxoacyl-(acyl carrier protein) synthase III; Rev	93.98
PRK07515	372	3-oxoacyl-(acyl carrier protein) synthase III; Rev	93.88
PRK05963	326	3-oxoacyl-(acyl carrier protein) synthase II; Revi	93.59
PRK04262	347	hypothetical protein; Provisional	93.28
cd00834	406	KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP)	93.27
PRK05952	381	3-oxoacyl-(acyl carrier protein) synthase II; Revi	93.25
PRK07204	329	3-oxoacyl-(acyl carrier protein) synthase III; Rev	93.03
CHL00203	326	fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr	92.87
PRK06025	417	acetyl-CoA acetyltransferase; Provisional	92.86
PRK06840	339	hypothetical protein; Validated	92.62
PRK07910	418	3-oxoacyl-(acyl carrier protein) synthase II; Revi	92.61
TIGR03150	407	fabF beta-ketoacyl-acyl-carrier-protein synthase I	92.58
PRK06519	398	3-oxoacyl-(acyl carrier protein) synthase II; Revi	92.28
PLN02326	379	3-oxoacyl-[acyl-carrier-protein] synthase III	92.16
cd00828	407	elong_cond_enzymes "elongating" condensing enzymes	92.09
PRK09185	392	3-oxoacyl-(acyl carrier protein) synthase I; Revie	91.96
PLN02787	540	3-oxoacyl-[acyl-carrier-protein] synthase II	91.92
PRK07314	411	3-oxoacyl-(acyl carrier protein) synthase II; Revi	91.86
PRK08722	414	3-oxoacyl-(acyl carrier protein) synthase II; Revi	91.85
PRK12879	325	3-oxoacyl-(acyl carrier protein) synthase III; Rev	91.48
COG0304	412	FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li	91.44
TIGR00747	318	fabH 3-oxoacyl-(acyl-carrier-protein) synthase III	91.21
cd00830	320	KAS_III Ketoacyl-acyl carrier protein synthase III	91.08
PRK05790	393	putative acyltransferase; Provisional	91.07
PTZ00050	421	3-oxoacyl-acyl carrier protein synthase; Provision	90.91
PRK09050	401	beta-ketoadipyl CoA thiolase; Validated	90.87
TIGR01930	386	AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi	90.86
COG1214	220	Inactive homolog of metal-dependent proteases, put	90.82
PRK07103	410	polyketide beta-ketoacyl:acyl carrier protein synt	90.62
PLN02287	452	3-ketoacyl-CoA thiolase	90.61
PRK09051	394	beta-ketothiolase; Provisional	90.46
PRK09052	399	acetyl-CoA acetyltransferase; Provisional	90.44
PRK14691	342	3-oxoacyl-(acyl carrier protein) synthase II; Prov	90.44
TIGR01796	117	CM_mono_aroH monofunctional chorismate mutase, gra	90.32
PRK13359	400	beta-ketoadipyl CoA thiolase; Provisional	90.18
PF02803	123	Thiolase_C: Thiolase, C-terminal domain; InterPro:	90.14
PRK06690	361	acetyl-CoA acetyltransferase; Provisional	90.12
PLN02836	437	3-oxoacyl-[acyl-carrier-protein] synthase	89.92
PRK07937	352	lipid-transfer protein; Provisional	89.77
PRK06333	424	3-oxoacyl-(acyl carrier protein) synthase II; Revi	89.56
TIGR03285	445	methan_mark_14 putative methanogenesis marker prot	89.4
PF07736	118	CM_1: Chorismate mutase type I; InterPro: IPR00824	89.38
TIGR02430	400	pcaF beta-ketoadipyl CoA thiolase. Members of this	89.34
PRK09116	405	3-oxoacyl-(acyl carrier protein) synthase II; Revi	89.23
PRK06501	425	3-oxoacyl-(acyl carrier protein) synthase II; Revi	89.12
cd00833	421	PKS polyketide synthases (PKSs) polymerize simple	88.91
PRK09352	319	3-oxoacyl-(acyl carrier protein) synthase III; Rev	88.9
cd00825	332	decarbox_cond_enzymes decarboxylating condensing e	88.74
smart00825	424	PKS_KS Beta-ketoacyl synthase. The structure of be	88.66
cd00751	386	thiolase Thiolase are ubiquitous enzymes that cata	87.76
COG0332	323	FabH 3-oxoacyl-[acyl-carrier-protein]	87.64
PF00814	268	Peptidase_M22: Glycoprotease family; InterPro: IPR	87.43
PRK06205	404	acetyl-CoA acetyltransferase; Provisional	87.26
PRK07661	391	acetyl-CoA acetyltransferase; Provisional	87.24
PRK05656	393	acetyl-CoA acetyltransferase; Provisional	87.17
cd00327	254	cond_enzymes Condensing enzymes; Family of enzymes	87.03
TIGR03725	202	bact_YeaZ universal bacterial protein YeaZ. This f	86.99
PRK08242	402	acetyl-CoA acetyltransferase; Validated	86.8
KOG1394|consensus	440		86.67
PRK07850	387	acetyl-CoA acetyltransferase; Provisional	86.56
PRK06445	394	acetyl-CoA acetyltransferase; Provisional	86.16
PRK06366	388	acetyl-CoA acetyltransferase; Provisional	85.91
PRK06954	397	acetyl-CoA acetyltransferase; Provisional	85.72
PRK12880	353	3-oxoacyl-(acyl carrier protein) synthase III; Rev	85.29
cd02185	117	AroH Chorismate mutase (AroH) is one of at least f	85.27
PRK08235	393	acetyl-CoA acetyltransferase; Provisional	85.18
PRK07851	406	acetyl-CoA acetyltransferase; Provisional	84.74
PF09887	448	DUF2114: Uncharacterized protein conserved in arch	84.37
PRK07801	382	acetyl-CoA acetyltransferase; Provisional	84.23
PRK06158	384	thiolase; Provisional	83.32
PF14574	412	DUF4445: Domain of unknown function (DUF4445); PDB	83.28
PLN02644	394	acetyl-CoA C-acetyltransferase	82.89
PRK09604	332	UGMP family protein; Validated	82.39
TIGR00329	305	gcp_kae1 metallohydrolase, glycoprotease/Kae1 fami	82.26
PRK06504	390	acetyl-CoA acetyltransferase; Provisional	81.98
PRK06633	392	acetyl-CoA acetyltransferase; Provisional	81.5
PRK08256	391	lipid-transfer protein; Provisional	81.26
cd00831	361	CHS_like Chalcone and stilbene synthases; plant-sp	81.2
PRK08304	337	stage V sporulation protein AD; Validated	80.59
COG3425	377	PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi	80.51
TIGR02845	327	spore_V_AD stage V sporulation protein AD. Bacillu	80.45

>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]

Probab=99.84  E-value=2.5e-20  Score=132.27  Aligned_cols=99  Identities=29%  Similarity=0.355  Sum_probs=91.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchh---HHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQ---RALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFI   82 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~---~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i   82 (110)
                      +++...+|+.+|+++||+++|++|+|||.||++++++++..|.   .++..||++++++|+++.+|++++.||..|..+|
T Consensus        48 ~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~~~~afDl~aaCsgf~yaL~~A~~~i  127 (323)
T COG0332          48 DDETTSDLAVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLGGAPAFDLQAACSGFLYALSVADGLI  127 (323)
T ss_pred             CCccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCCCcceeechhhhHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999987664   4678899988999999999999999999999999


Q ss_pred             HcC-CCeEEEEeeccCCCCCCCC
Q psy13271         83 ESG-SDCTLALGFEKMEKGSLGA  104 (110)
Q Consensus        83 ~sG-~~~vlv~g~e~~s~~~~~~  104 (110)
                      ++| ++++||+++|.+|+..-+.
T Consensus       128 ~sG~~k~vLVVg~e~~S~~ld~~  150 (323)
T COG0332         128 RSGGYKNVLVVGAETLSRILDWT  150 (323)
T ss_pred             HcCCCCEEEEEehhHhhccCCHh
Confidence            999 9999999999998775443

>PRK08235 acetyl-CoA acetyltransferase; Provisional

Probab=99.81  E-value=3.5e-19  Score=129.91  Aligned_cols=102  Identities=28%  Similarity=0.408  Sum_probs=88.7

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecC--CCcch-hHHHHHcCCC-CCCeeeEeccchHHHH
Q psy13271          1 FQKPK---EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYG--DSTCG-QRALYQIGMT-GIPVFNVNNNCSTGSS   73 (110)
Q Consensus         1 f~~~~---~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~--~~~~~-~~~a~~lg~~-~~~~~~i~~~C~sg~~   73 (110)
                      |+|++   ++.++.+|+.+|++++|+++|++++|||.+|+++..+  +...+ ..++..+|++ ++|+++++++|+||..
T Consensus        14 fg~~~g~~~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~~~CaSg~~   93 (393)
T PRK08235         14 FGKFGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVNKVCASGLR   93 (393)
T ss_pred             ccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehhhhhhHHHH
Confidence            56643   5789999999999999999999999999999998765  32222 3466789995 6899999999999999


Q ss_pred             HHHHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         74 ALMLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        74 al~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      ++..|+++|++| +|++|++|+|++|+.|+
T Consensus        94 Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~  123 (393)
T PRK08235         94 AVTLADQIIRAGDASVIVAGGMESMSNAPY  123 (393)
T ss_pred             HHHHHHHHHHCCCCCEEEEEeeeccccCcc
Confidence            999999999999 99999999999998875

>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2

Probab=99.81  E-value=2.6e-19  Score=124.56  Aligned_cols=98  Identities=35%  Similarity=0.526  Sum_probs=83.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH----HHHHcCCC-CCCeeeEeccchHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQR----ALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQ   80 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~----~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~   80 (110)
                      ++.++.+|+.++++++|+++++++++||.+++|+..+... +..    ++-..|+. .+|+++|+++|+||+.|+.+|+.
T Consensus        22 ~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~-g~~~ar~~~l~aGl~~~vp~~~V~~~CaSG~~Av~~a~~  100 (264)
T PF00108_consen   22 ADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGE-GQNIARQAALAAGLPESVPATTVNRACASGLQAVHLAAM  100 (264)
T ss_dssp             TTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTT-TCHHHHHHHHHTTS-TTSEEEEEE-GGGHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhcccchhhhhhcCccccccccc-chhhhhhhhhhcccccccceeeehhhhhHHHHHHHHhhh
Confidence            7899999999999999999999999999999999876544 333    33457884 57999999999999999999999


Q ss_pred             HHHcC-CCeEEEEeeccCCCCCCCC
Q psy13271         81 FIESG-SDCTLALGFEKMEKGSLGA  104 (110)
Q Consensus        81 ~i~sG-~~~vlv~g~e~~s~~~~~~  104 (110)
                      .|++| +|++|++|+|+||+.|+..
T Consensus       101 ~I~sG~~dvvlagGvE~mS~~p~~~  125 (264)
T PF00108_consen  101 AIASGEADVVLAGGVESMSRVPMGL  125 (264)
T ss_dssp             HHHTTS-SEEEEEEEEETTTSCEEE
T ss_pred             hhcCCCccEEEEecccccccccccc
Confidence            99999 9999999999999998766

3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....

>PRK05656 acetyl-CoA acetyltransferase; Provisional

Probab=99.80  E-value=9e-19  Score=127.73  Aligned_cols=102  Identities=25%  Similarity=0.383  Sum_probs=88.6

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCC---cchhHHHHHcCCCC-CCeeeEeccchHHHH
Q psy13271          1 FQKPK---EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDS---TCGQRALYQIGMTG-IPVFNVNNNCSTGSS   73 (110)
Q Consensus         1 f~~~~---~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~---~~~~~~a~~lg~~~-~~~~~i~~~C~sg~~   73 (110)
                      |||++   +++++.+|+.+|++++|+++|+++++||.+++++..+..   ..+..++..+|+.. +|+++++++|+||..
T Consensus        14 fgk~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~~~Casg~~   93 (393)
T PRK05656         14 IGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLNKVCGSGLK   93 (393)
T ss_pred             ccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEecccchhHHH
Confidence            56643   568899999999999999999999999999999876432   22334778899975 899999999999999


Q ss_pred             HHHHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         74 ALMLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        74 al~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      ++.+|+++|++| +|++|++|+|++|+.|+
T Consensus        94 ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~  123 (393)
T PRK05656         94 ALHLAAQAIRCGDAEVIIAGGQENMSLAPY  123 (393)
T ss_pred             HHHHHHHHHHcCCCCEEEEEEEhhhccCcc
Confidence            999999999999 99999999999998775

>PRK07108 acetyl-CoA acetyltransferase; Provisional

Probab=99.80  E-value=9.6e-19  Score=127.54  Aligned_cols=97  Identities=23%  Similarity=0.324  Sum_probs=85.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchh----HHHHHcCCC-CCCeeeEeccchHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQ----RALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQ   80 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~----~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~   80 (110)
                      +++++.+|+.+|++++|+++|+++++||.+++|+..++...++    .++..+|++ .+|+++++++|+||..|++.|++
T Consensus        23 ~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~~aCaSg~~Al~~A~~  102 (392)
T PRK07108         23 NMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQ  102 (392)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeecchhhHHHHHHHHHHH
Confidence            4567899999999999999999999999999999876654332    345567886 48999999999999999999999


Q ss_pred             HHHcC-CCeEEEEeeccCCCCCC
Q psy13271         81 FIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        81 ~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      +|++| +|++|++|+|+||+.|+
T Consensus       103 ~I~sG~~d~vlagGvE~ms~~p~  125 (392)
T PRK07108        103 RVIAGEGDVFVAGGVESISCVQN  125 (392)
T ss_pred             HHHCCCCCEEEEEEEeccCCCCC
Confidence            99999 99999999999998775

>PRK09051 beta-ketothiolase; Provisional

Probab=99.79  E-value=1.6e-18  Score=126.54  Aligned_cols=97  Identities=29%  Similarity=0.415  Sum_probs=85.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc----chhHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDST----CGQRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQ   80 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~----~~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~   80 (110)
                      +++++.+|+.+|++++|+++|++++|||.+++++..++..    .+..++..+|+. ++|+++++++|+||+.++..|++
T Consensus        23 ~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~~aCaSg~~Al~~A~~  102 (394)
T PRK09051         23 KDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVNRLCGSGLQAIVSAAQ  102 (394)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEecccchHHHHHHHHHHH
Confidence            5779999999999999999999999999999998775432    222345667986 58999999999999999999999


Q ss_pred             HHHcC-CCeEEEEeeccCCCCCC
Q psy13271         81 FIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        81 ~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      +|++| +|++|++|+|++|+.|+
T Consensus       103 ~I~sG~~d~vLvvG~E~mS~~p~  125 (394)
T PRK09051        103 AILLGDADVAIGGGAESMSRAPY  125 (394)
T ss_pred             HHHcCCCCEEEEEeehhcccCcc
Confidence            99999 99999999999998765

>PRK07850 acetyl-CoA acetyltransferase; Provisional

Probab=99.79  E-value=1.7e-18  Score=126.04  Aligned_cols=102  Identities=25%  Similarity=0.325  Sum_probs=86.4

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchh----HHHHHcCCC-CCCeeeEeccchHHH
Q psy13271          1 FQKPK---EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQ----RALYQIGMT-GIPVFNVNNNCSTGS   72 (110)
Q Consensus         1 f~~~~---~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~----~~a~~lg~~-~~~~~~i~~~C~sg~   72 (110)
                      |||+.   ++.++.+|+.++++++|+++|+++++||.+++|+..+....+.    .++..+|+. ++|+++|+++|+||+
T Consensus        14 fgk~~g~~~~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~~~CaSG~   93 (387)
T PRK07850         14 IGKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTIDCQCGSAQ   93 (387)
T ss_pred             ccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEecccccHH
Confidence            66643   3678999999999999999999999999999998653222112    233448997 589999999999999


Q ss_pred             HHHHHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         73 SALMLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        73 ~al~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      .|+..|++.|++| +|.+|++|+|+||+.|+
T Consensus        94 ~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~  124 (387)
T PRK07850         94 QANHLVAGLIAAGAIDVGIACGVEAMSRVPL  124 (387)
T ss_pred             HHHHHHHHHHHCCCCCEEEEEeEecCCCCcc
Confidence            9999999999999 99999999999999885

>PRK06205 acetyl-CoA acetyltransferase; Provisional

Probab=99.79  E-value=1.7e-18  Score=126.67  Aligned_cols=102  Identities=21%  Similarity=0.366  Sum_probs=88.4

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCC-CCCeeeEeccchHHHH
Q psy13271          1 FQKPK---EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMT-GIPVFNVNNNCSTGSS   73 (110)
Q Consensus         1 f~~~~---~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~-~~~~~~i~~~C~sg~~   73 (110)
                      |||+.   +++++.+|+.+|++++|++++++++|||.+++++..++...+   ..++..+|+. ++|+++++++|+||+.
T Consensus        14 fgk~~g~~~~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~~~CaSg~~   93 (404)
T PRK06205         14 VGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLDRRCGSGLQ   93 (404)
T ss_pred             ccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehhhhhhHHHH
Confidence            56643   478999999999999999999999999999999876654322   2366778997 5899999999999999


Q ss_pred             HHHHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         74 ALMLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        74 al~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      ++..|+++|++| ++++|++|+|++++.++
T Consensus        94 Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~  123 (404)
T PRK06205         94 AVITAAMQVQTGAADVVIAGGAESMSNVEF  123 (404)
T ss_pred             HHHHHHHHHHcCCCCEEEEeeehhhccCcc
Confidence            999999999999 99999999999997663

>PRK12578 acetyl-CoA acetyltransferase; Provisional

Probab=99.79  E-value=2.4e-18  Score=125.16  Aligned_cols=101  Identities=29%  Similarity=0.383  Sum_probs=88.3

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCC---cchhHHHHHcCCCCCCeeeEeccchHHHHHHHH
Q psy13271          1 FQKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDS---TCGQRALYQIGMTGIPVFNVNNNCSTGSSALML   77 (110)
Q Consensus         1 f~~~~~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~---~~~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~   77 (110)
                      |+|+ +++++.+|+.+|++++|+++||+++|||.+++++..++.   ..+..++..+|+++.+.++++++|+|+..+|..
T Consensus        13 ~~~~-~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~~~~v~~~casg~~al~~   91 (385)
T PRK12578         13 FGRR-DDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLTGKVPLRVEAMCATGLAASLT   91 (385)
T ss_pred             eeec-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCCCCCeeEEeccCHHHHHHHHH
Confidence            5665 688999999999999999999999999999998865432   233457788999877889999999999999999


Q ss_pred             HHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         78 AKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        78 A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      |+.+|++| ++++||+++|.+++.++
T Consensus        92 A~~~I~sG~~~~vLvvg~e~~s~~~~  117 (385)
T PRK12578         92 AYTAVASGLVDMAIAVGVDKMTEVDT  117 (385)
T ss_pred             HHHHHHCCCCCEEEEEEEeecccCcc
Confidence            99999999 99999999999987653

>PRK08242 acetyl-CoA acetyltransferase; Validated

Probab=99.79  E-value=2.9e-18  Score=125.29  Aligned_cols=97  Identities=25%  Similarity=0.355  Sum_probs=86.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc----chhHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDST----CGQRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQ   80 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~----~~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~   80 (110)
                      ++.++.+|+.+|++++|+++|+++++||.||+++..+...    .+...+..+|+. .+|+++|+++|+||+.|+..|++
T Consensus        24 ~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn~aCaSg~~Ai~~A~~  103 (402)
T PRK08242         24 HEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAAA  103 (402)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEcchhhhHHHHHHHHHH
Confidence            7889999999999999999999999999999999876432    233455678984 48999999999999999999999


Q ss_pred             HHHcC-CCeEEEEeeccCCCCCC
Q psy13271         81 FIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        81 ~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      +|++| +|++|++|+|+||+.|+
T Consensus       104 ~I~sG~~d~vLv~G~E~mS~~p~  126 (402)
T PRK08242        104 KVRSGWDDLVIAGGVESMSRVPM  126 (402)
T ss_pred             HHHcCCCCEEEEEEEEccCCCcc
Confidence            99999 99999999999999886

>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=99.78  E-value=2.4e-18  Score=125.17  Aligned_cols=102  Identities=25%  Similarity=0.400  Sum_probs=86.9

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCC-CCeeeEeccchHHHH
Q psy13271          1 FQKPK---EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTG-IPVFNVNNNCSTGSS   73 (110)
Q Consensus         1 f~~~~---~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~-~~~~~i~~~C~sg~~   73 (110)
                      |+|+.   ++++..+|+.+|++++|+++|++++|||.+++++..+++..+   ..++..+|+++ +|+++++++|+|+..
T Consensus        10 f~r~~~~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~~~c~s~~~   89 (386)
T cd00751          10 IGRFGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVNRVCGSGLQ   89 (386)
T ss_pred             ccCCCCCCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhccccHHHHH
Confidence            55543   258899999999999999999999999999998765544322   23667899974 799999999999999


Q ss_pred             HHHHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         74 ALMLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        74 al~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      +|..|+++|++| +++|||+++|.+++.++
T Consensus        90 al~~A~~~I~sG~~~~vLv~g~e~~s~~~~  119 (386)
T cd00751          90 AVALAAQSIAAGEADVVVAGGVESMSRAPY  119 (386)
T ss_pred             HHHHHHHHHHCCCCCeEEEeeeeccccCcc
Confidence            999999999999 99999999999987663

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PRK08131 acetyl-CoA acetyltransferase; Provisional

Probab=99.78  E-value=3e-18  Score=125.24  Aligned_cols=102  Identities=24%  Similarity=0.379  Sum_probs=87.7

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchh----HHHHHcCCC-CCCeeeEeccchHHH
Q psy13271          1 FQKPK---EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQ----RALYQIGMT-GIPVFNVNNNCSTGS   72 (110)
Q Consensus         1 f~~~~---~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~----~~a~~lg~~-~~~~~~i~~~C~sg~   72 (110)
                      |||+.   ++.++.+|+.++++++|+++|+++++||.+++|+..++.....    .++..+|+. .+|+++++++|+||+
T Consensus        14 fgk~~g~l~~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~~~CaSG~   93 (401)
T PRK08131         14 FGRHAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVNRLCASGL   93 (401)
T ss_pred             ccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeeechhhhHH
Confidence            56643   3789999999999999999999999999999998764432222    255678886 589999999999999


Q ss_pred             HHHHHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         73 SALMLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        73 ~al~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      .|+..|++.|++| +|.+|++|+|+||+.++
T Consensus        94 ~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~  124 (401)
T PRK08131         94 AAVIDAARAITCGEGDLYLAGGVESMSRAPF  124 (401)
T ss_pred             HHHHHHHHHHHCCCCCEEEEEEecCCCCCcc
Confidence            9999999999999 99999999999998875

>PRK09052 acetyl-CoA acetyltransferase; Provisional

Probab=99.78  E-value=3.3e-18  Score=124.96  Aligned_cols=97  Identities=24%  Similarity=0.385  Sum_probs=84.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHc-CCCccccCeEEEEeecCCCcch---hH-HHHHcCCC-CCCeeeEeccchHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDA-GISINQVQQACCGYVYGDSTCG---QR-ALYQIGMT-GIPVFNVNNNCSTGSSALMLAK   79 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~a-gl~~~~id~vi~~~~~~~~~~~---~~-~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~   79 (110)
                      ++.+..+|+.+|++++|+++ |++++|||.+|+++..++...+   .. +...+|+. ++|+++|+++|+||..|+..|+
T Consensus        27 ~~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~~aCaSg~~Al~~A~  106 (399)
T PRK09052         27 KNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAA  106 (399)
T ss_pred             CCCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeecchhhHHHHHHHHHH
Confidence            46899999999999999997 9999999999999877654322   23 33456897 4899999999999999999999


Q ss_pred             HHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         80 QFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        80 ~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      .+|++| +|++|++|+|++|+.|+
T Consensus       107 ~~I~sG~~d~vLv~G~E~mS~~p~  130 (399)
T PRK09052        107 DRIRVGEADVMIAAGVESMSMVPM  130 (399)
T ss_pred             HHHHCCCCCEEEEEEEeccccCcc
Confidence            999999 99999999999998874

>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed

Probab=99.77  E-value=4.6e-18  Score=125.18  Aligned_cols=102  Identities=20%  Similarity=0.232  Sum_probs=87.1

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc---chhHHHHHcCCC-CCCeeeEeccchHHHH
Q psy13271          1 FQKPK---EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDST---CGQRALYQIGMT-GIPVFNVNNNCSTGSS   73 (110)
Q Consensus         1 f~~~~---~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~---~~~~~a~~lg~~-~~~~~~i~~~C~sg~~   73 (110)
                      |+++.   ++.++.+|+.++++++|+++|+++++||.+++|+..+...   ....++..+|+. ++|+++++++|+||+.
T Consensus        17 fgk~~g~l~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~~aCaSG~~   96 (428)
T PRK08963         17 FAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQ   96 (428)
T ss_pred             ccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeehhhhHHHHH
Confidence            55542   5789999999999999999999999999999998643221   112356678997 5899999999999999


Q ss_pred             HHHHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         74 ALMLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        74 al~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      |+..|+++|++| +|++|++|+|+||+.++
T Consensus        97 Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~  126 (428)
T PRK08963         97 AVANVAESIMAGTIDIGIAGGADSSSVLPI  126 (428)
T ss_pred             HHHHHHHHHHCCCCCEEEEecccccCCCcc
Confidence            999999999999 99999999999998874

>PRK06157 acetyl-CoA acetyltransferase; Validated

Probab=99.77  E-value=7.3e-18  Score=123.15  Aligned_cols=101  Identities=35%  Similarity=0.486  Sum_probs=87.9

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCC---CcchhHHHHHcCCCCCCeeeEeccchHHHHHHHH
Q psy13271          1 FQKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGD---STCGQRALYQIGMTGIPVFNVNNNCSTGSSALML   77 (110)
Q Consensus         1 f~~~~~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~---~~~~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~   77 (110)
                      |+|+ ++.+..+|+.++++++|+++||+++|||.+++++...+   ...+..+++.+|+.+.+.++++++|+|+..++++
T Consensus        19 ~~~~-~~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~~~~~~~v~~~c~sg~~ai~~   97 (398)
T PRK06157         19 FGER-WDAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLPNIPVTRVENFCATGSEAFRG   97 (398)
T ss_pred             cccc-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCCCCCEEEEecccHHHHHHHHH
Confidence            5665 57889999999999999999999999999999875432   2223567889999878999999999999999999


Q ss_pred             HHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         78 AKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        78 A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      |+..|++| +|++|++++|++++.++
T Consensus        98 A~~~I~sG~~d~vlv~G~e~~s~~~~  123 (398)
T PRK06157         98 AVYAVASGAYDIALALGVEKLKDTGY  123 (398)
T ss_pred             HHHHHHCCCCCEEEEEEEeecccCcc
Confidence            99999999 99999999999987654

>PRK13359 beta-ketoadipyl CoA thiolase; Provisional

Probab=99.77  E-value=9.9e-18  Score=122.51  Aligned_cols=102  Identities=18%  Similarity=0.302  Sum_probs=87.4

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHH-cCCCccccCeEEEEeecCCCc----chhHHHHHcCCCC-CCeeeEeccchHH
Q psy13271          1 FQKPK---EDTDYPELAKEALIKALDD-AGISINQVQQACCGYVYGDST----CGQRALYQIGMTG-IPVFNVNNNCSTG   71 (110)
Q Consensus         1 f~~~~---~~~~~~~l~~~a~~~al~~-agl~~~~id~vi~~~~~~~~~----~~~~~a~~lg~~~-~~~~~i~~~C~sg   71 (110)
                      |||++   ++.++.+|+.++++++|++ +++++++||.+|+|+..+...    .+..++..+|+.. +|+++|+++|+||
T Consensus        14 fgk~~g~~~~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~~~CaSG   93 (400)
T PRK13359         14 IGRYGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTINRLCGSG   93 (400)
T ss_pred             ccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEeccchhH
Confidence            56643   4578899999999999996 599999999999998764332    2334556789974 9999999999999


Q ss_pred             HHHHHHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         72 SSALMLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        72 ~~al~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      +.|+.+|++.|++| +|.+|++|+|+||+.|+
T Consensus        94 ~~Av~~A~~~I~sG~~divlagGvEsmS~~p~  125 (400)
T PRK13359         94 MDAVGVAARAIKSGEAALMIAGGVESMSRAPF  125 (400)
T ss_pred             HHHHHHHHHHHHcCCCCEEEEeeeeccCCCcc
Confidence            99999999999999 99999999999999885

>PRK06954 acetyl-CoA acetyltransferase; Provisional

Probab=99.76  E-value=1e-17  Score=122.32  Aligned_cols=101  Identities=25%  Similarity=0.423  Sum_probs=84.5

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHH----HHHcCCC-CCCeeeEeccchHHH
Q psy13271          1 FQKPK---EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRA----LYQIGMT-GIPVFNVNNNCSTGS   72 (110)
Q Consensus         1 f~~~~---~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~----a~~lg~~-~~~~~~i~~~C~sg~   72 (110)
                      |+|+.   ++.++.+|+.+|++++|+++|+++++||.+++|+..+++. ...+    +..+|+. .+|+++++++|+||.
T Consensus        19 f~k~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~-~~~~~~~~~l~ag~~~~~p~~~V~~aCaSG~   97 (397)
T PRK06954         19 MAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQ-GQAPARQAALGAGLPLSVGCTTVNKMCGSGM   97 (397)
T ss_pred             ccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCcc-chHHHHHHHHcCCCCCCccEeeccccchHHH
Confidence            55532   5788999999999999999999999999999998765443 2222    2335665 389999999999999


Q ss_pred             HHHHHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         73 SALMLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        73 ~al~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      .++..|+++|++| +|++|++|+|++|+.++
T Consensus        98 ~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~  128 (397)
T PRK06954         98 RAAMFAHDMLVAGSVDVIVAGGMESMTNAPY  128 (397)
T ss_pred             HHHHHHHHHHHCCCCCEEEEEeeeccCCCcc
Confidence            9999999999999 99999999999997664

>TIGR02446 FadI fatty oxidation complex, beta subunit FadI

Probab=99.76  E-value=6.1e-18  Score=124.57  Aligned_cols=101  Identities=18%  Similarity=0.224  Sum_probs=86.7

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHH----cCCC-CCCeeeEeccchHHH
Q psy13271          1 FQKPK---EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQ----IGMT-GIPVFNVNNNCSTGS   72 (110)
Q Consensus         1 f~~~~---~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~----lg~~-~~~~~~i~~~C~sg~   72 (110)
                      |+|++   .+.++.+|+.++++++|+++++++++||.+++|+..+... ...+++.    .|+. .+|+++|+++|+||+
T Consensus        19 fgk~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~-~~~~ar~~~l~aGl~~~~p~~~V~~~CaSG~   97 (430)
T TIGR02446        19 FARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPE-APNIAREIVLGTGMNVHTDAYSVTRACATSF   97 (430)
T ss_pred             cccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCc-cchHHHHHHHhCCCCCCCchhhhhhhhhHHH
Confidence            55642   5679999999999999999999999999999998754322 2345555    6997 789999999999999


Q ss_pred             HHHHHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         73 SALMLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        73 ~al~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      .|+..|+++|++| +|.+|++|+|+||+.|+
T Consensus        98 ~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~  128 (430)
T TIGR02446        98 QSAVNVAESIMAGAIDIGIAGGADSSSVLPI  128 (430)
T ss_pred             HHHHHHHHHHHCCCCCEEEEeeeEcccCCcc
Confidence            9999999999999 99999999999998664

This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.

>PRK06504 acetyl-CoA acetyltransferase; Provisional

Probab=99.75  E-value=1.8e-17  Score=120.79  Aligned_cols=102  Identities=21%  Similarity=0.286  Sum_probs=84.3

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH----HHHHcCC-CCCCeeeEeccchHHH
Q psy13271          1 FQKPK---EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQR----ALYQIGM-TGIPVFNVNNNCSTGS   72 (110)
Q Consensus         1 f~~~~---~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~----~a~~lg~-~~~~~~~i~~~C~sg~   72 (110)
                      |||+.   ++.++.+|+.++++++|+++++++++||.+++|+..+.......    ..-..|+ .++|+++++++|+||+
T Consensus        14 fgk~~g~~~~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~~~CaSG~   93 (390)
T PRK06504         14 GGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSIDRQCGSSQ   93 (390)
T ss_pred             ccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEechhhHHH
Confidence            56643   47889999999999999999999999999999987532211111    2223466 3689999999999999


Q ss_pred             HHHHHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         73 SALMLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        73 ~al~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      .|+..|++.|++| +|.+|++|+|+||+.|+
T Consensus        94 ~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~  124 (390)
T PRK06504         94 QALHFAAQAVMSGTMDIVIAAGVESMTRVPM  124 (390)
T ss_pred             HHHHHHHHHHHCCCCCEEEEeeeeecCCCcc
Confidence            9999999999999 99999999999998875

>PRK06633 acetyl-CoA acetyltransferase; Provisional

Probab=99.75  E-value=1.3e-17  Score=121.66  Aligned_cols=97  Identities=25%  Similarity=0.390  Sum_probs=85.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc---chhHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDST---CGQRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~---~~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      ++.++.+|+.++++++|+++|+++++||.+++|+..+...   ....++..+|+. .+|+++++++|+||+.|+..|++.
T Consensus        23 ~~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~~~CaSG~~Ai~~A~~~  102 (392)
T PRK06633         23 STTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANS  102 (392)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhcchhHHHHHHHHHHHHH
Confidence            7899999999999999999999999999999998764332   112345678997 599999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      |++| +|++|++|+|+||+.|+
T Consensus       103 I~sG~~dvvla~G~E~ms~~p~  124 (392)
T PRK06633        103 IMTGDNEIVIAGGQENMSLGMH  124 (392)
T ss_pred             HHcCCCCEEEEcccccCCCCCc
Confidence            9999 99999999999997653

>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism

Probab=99.75  E-value=2.1e-17  Score=119.53  Aligned_cols=100  Identities=33%  Similarity=0.417  Sum_probs=89.0

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCC---cchhHHHHHcCCCCCCeeeEeccchHHHHHHHH
Q psy13271          1 FQKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDS---TCGQRALYQIGMTGIPVFNVNNNCSTGSSALML   77 (110)
Q Consensus         1 f~~~~~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~---~~~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~   77 (110)
                      |+|+ .+.++.+|+.+|++++|+++|+++++||.+++++..++.   ..+..++..+|+.+.+.++++++|+|+..++..
T Consensus         8 ~~~~-~~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~~~~~~~v~~~c~sg~~al~~   86 (375)
T cd00829           8 FGRR-SDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLGKPATRVEAAGASGSAAVRA   86 (375)
T ss_pred             cccC-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCCCcceeeEeCccHHHHHHHHH
Confidence            5665 478999999999999999999999999999998876542   344567889999778999999999999999999


Q ss_pred             HHHHHHcC-CCeEEEEeeccCCCCC
Q psy13271         78 AKQFIESG-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        78 A~~~i~sG-~~~vlv~g~e~~s~~~  101 (110)
                      |+++|++| ++++|++++|.+++.+
T Consensus        87 Aa~~I~sG~~~~vlv~g~e~~s~~~  111 (375)
T cd00829          87 AAAAIASGLADVVLVVGAEKMSDVP  111 (375)
T ss_pred             HHHHHHhCCCCEEEEEEEeecccCc
Confidence            99999999 9999999999998765

The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.

>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases

Probab=99.75  E-value=2.4e-17  Score=120.06  Aligned_cols=96  Identities=24%  Similarity=0.447  Sum_probs=84.1

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc---hhHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHHHH
Q psy13271          7 DTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC---GQRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQFI   82 (110)
Q Consensus         7 ~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~---~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~~i   82 (110)
                      +++..+|+.+|++++|+++|++++|||.+++++.+++...   ...++..+|+. +.|+++++++|+++..++..|+++|
T Consensus        18 ~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I   97 (386)
T TIGR01930        18 DVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVNRQCASGLQAVILAAQLI   97 (386)
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeecchhhHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999876554322   23466789997 4899999999999999999999999


Q ss_pred             HcC-CCeEEEEeeccCCCCCC
Q psy13271         83 ESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        83 ~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      ++| ++++|++++|.+++.+.
T Consensus        98 ~sG~~~~vLv~g~e~~s~~~~  118 (386)
T TIGR01930        98 RAGEADVVVAGGVESMSRVPY  118 (386)
T ss_pred             HCCCCCEEEEEEehhhccCcc
Confidence            999 99999999999887663

This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt

>PRK09050 beta-ketoadipyl CoA thiolase; Validated

Probab=99.75  E-value=1.8e-17  Score=121.15  Aligned_cols=102  Identities=18%  Similarity=0.308  Sum_probs=87.1

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHH-cCCCccccCeEEEEeecCCCc----chhHHHHHcCCC-CCCeeeEeccchHH
Q psy13271          1 FQKPK---EDTDYPELAKEALIKALDD-AGISINQVQQACCGYVYGDST----CGQRALYQIGMT-GIPVFNVNNNCSTG   71 (110)
Q Consensus         1 f~~~~---~~~~~~~l~~~a~~~al~~-agl~~~~id~vi~~~~~~~~~----~~~~~a~~lg~~-~~~~~~i~~~C~sg   71 (110)
                      |||+.   ++.++.+|+.++++++|++ +|+++++||.+++|+..+...    .+..++..+|+. ++|+++|+++|+||
T Consensus        14 fgk~~g~l~~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~~aCaSG   93 (401)
T PRK09050         14 IGRYGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTINRLCGSG   93 (401)
T ss_pred             cccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEecccccH
Confidence            56643   4788999999999999995 799999999999998754221    222366789995 59999999999999


Q ss_pred             HHHHHHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         72 SSALMLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        72 ~~al~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      ..|+..|++.|++| +|++|++|+|+||+.|+
T Consensus        94 ~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~  125 (401)
T PRK09050         94 MDAVGTAARAIKAGEAELMIAGGVESMSRAPF  125 (401)
T ss_pred             HHHHHHHHHHHHCCCCCEEEEecccccccCcc
Confidence            99999999999999 99999999999998875

>TIGR02845 spore_V_AD stage V sporulation protein AD

Probab=99.75  E-value=2.6e-17  Score=116.31  Aligned_cols=94  Identities=19%  Similarity=0.284  Sum_probs=79.7

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHH
Q psy13271          2 QKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         2 ~~~~~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      |....+.+..+|+.+|+++||+++|++++|||.+++++..........+++.||+   |.++++++|+++..+|..|..+
T Consensus        42 g~ks~EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~Q~~~As~vA~~LGI---P~fdV~~ACSTf~~AL~lAa~l  118 (327)
T TIGR02845        42 GEDSWEKAERKLMEDAVNLALKKANLKKDDVDFFLAGDLLNQIITANFVARDLGI---PFLGLYGACSTSMETLALGAML  118 (327)
T ss_pred             CCcCcchhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCCcccHHHHHHHHhCC---CEEEEeccCHHHHHHHHHHHHH
Confidence            4433567888999999999999999999999999998753333344567788886   6799999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCC
Q psy13271         82 IESG-SDCTLALGFEKME   98 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s   98 (110)
                      |++| +++|||++++.++
T Consensus       119 I~SG~ad~VLVV~Ssh~S  136 (327)
T TIGR02845       119 VDGGFADRVLAATSSHYA  136 (327)
T ss_pred             HhCCCCCEEEEEEecccc
Confidence            9999 9999999977666

Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.

>PRK08256 lipid-transfer protein; Provisional

Probab=99.75  E-value=2.3e-17  Score=120.25  Aligned_cols=101  Identities=65%  Similarity=1.064  Sum_probs=87.1

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHH
Q psy13271          1 FQKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQ   80 (110)
Q Consensus         1 f~~~~~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~   80 (110)
                      |++..++.+..+|+.+|++++|+++|+++++||.+++++..++......+...+|+.++++++++++|+|+..+|..|++
T Consensus        13 ~~~~~~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~~~~~~~~lGl~~~~~~~v~~~caSg~~ai~~A~~   92 (391)
T PRK08256         13 FEKPGASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTSGQRALYEVGMTGIPIVNVNNNCSTGSTALFLARQ   92 (391)
T ss_pred             cccCCCCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcchhHHHHHHcCCCCCCCcccccccHHHHHHHHHHHH
Confidence            45532357889999999999999999999999999998776655444456678999878899999999999999999999


Q ss_pred             HHHcC-CCeEEEEeeccCCCCC
Q psy13271         81 FIESG-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        81 ~i~sG-~~~vlv~g~e~~s~~~  101 (110)
                      +|++| +|++|++++|.++..+
T Consensus        93 ~I~sG~~d~vLv~g~e~~s~~~  114 (391)
T PRK08256         93 AVRSGAADCALALGFEQMQPGA  114 (391)
T ss_pred             HHHCCCCCEEEEEEEeeccccc
Confidence            99999 9999999999988654

>PLN02287 3-ketoacyl-CoA thiolase

Probab=99.75  E-value=2.6e-17  Score=121.85  Aligned_cols=97  Identities=25%  Similarity=0.388  Sum_probs=84.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchh----HHHHHcCCCC-CCeeeEeccchHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQ----RALYQIGMTG-IPVFNVNNNCSTGSSALMLAKQ   80 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~----~~a~~lg~~~-~~~~~i~~~C~sg~~al~~A~~   80 (110)
                      ++.++.+|+.+|++++|+++|++++|||.+++|+..+.+..+.    .++..+|+.+ .|+++++++|+||..++..|++
T Consensus        67 ~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~~~CaSG~~Ai~~Aa~  146 (452)
T PLN02287         67 KDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA  146 (452)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEeccCchHHHHHHHHHH
Confidence            4689999999999999999999999999999998765443222    3456789974 8999999999999999999999


Q ss_pred             HHHcC-CCeEEEEeeccCCCCCC
Q psy13271         81 FIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        81 ~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      +|++| +|++|++|+|++++.++
T Consensus       147 ~I~sG~~dvvLv~GvE~mS~~p~  169 (452)
T PLN02287        147 AIKAGFYDIGIGAGVESMTTNPM  169 (452)
T ss_pred             HHHcCCCCeEEEEeEEecCCCch
Confidence            99999 99999999999998763

>PRK07661 acetyl-CoA acetyltransferase; Provisional

Probab=99.74  E-value=2.4e-17  Score=120.21  Aligned_cols=96  Identities=19%  Similarity=0.274  Sum_probs=84.1

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc----hhHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHHH
Q psy13271          7 DTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC----GQRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         7 ~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~----~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      +.++.+|+.+|++++|+++|+.+++||.+++++..++...    +..++..+|+. ++|+++++++|+||..++..|+.+
T Consensus        24 ~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~~aCaSG~~Al~~A~~~  103 (391)
T PRK07661         24 TVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAER  103 (391)
T ss_pred             CCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehhhhhhHHHHHHHHHHHH
Confidence            6689999999999999999988899999999987654321    22366789997 489999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      |++| +|++||+|+|++++.|+
T Consensus       104 I~sG~~d~vLv~G~E~ms~~~~  125 (391)
T PRK07661        104 IMLGHSEAVIAGGAESMSLVPM  125 (391)
T ss_pred             HHcCCCCEEEEEEEeecccCCc
Confidence            9999 99999999999998775

>PRK05790 putative acyltransferase; Provisional

Probab=99.74  E-value=3.6e-17  Score=119.26  Aligned_cols=102  Identities=28%  Similarity=0.408  Sum_probs=85.1

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCC--cchh-HHHHHcCCC-CCCeeeEeccchHHHH
Q psy13271          1 FQKPK---EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDS--TCGQ-RALYQIGMT-GIPVFNVNNNCSTGSS   73 (110)
Q Consensus         1 f~~~~---~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~--~~~~-~~a~~lg~~-~~~~~~i~~~C~sg~~   73 (110)
                      |+|+.   +++++.+|+.+|++++|+++|++++|||.+++++..+..  ..+. .+...+|+. +.+.++++++|+|+..
T Consensus        14 ~~r~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~~~Casg~~   93 (393)
T PRK05790         14 IGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTINKVCGSGLK   93 (393)
T ss_pred             ccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeecccchHHHH
Confidence            55542   368999999999999999999999999999998765422  1222 244567886 5789999999999999


Q ss_pred             HHHHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         74 ALMLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        74 al~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      ++..|+++|++| ++++|++|+|.+|+.+.
T Consensus        94 al~~A~~~I~sG~~d~vLv~G~e~~s~~~~  123 (393)
T PRK05790         94 AVALAAQAIRAGDADIVVAGGQESMSQAPH  123 (393)
T ss_pred             HHHHHHHHHHcCCCCEEEEEeeeccccCcc
Confidence            999999999999 99999999999987764

>TIGR02430 pcaF beta-ketoadipyl CoA thiolase

Probab=99.74  E-value=2.7e-17  Score=120.24  Aligned_cols=102  Identities=20%  Similarity=0.307  Sum_probs=87.3

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHH-cCCCccccCeEEEEeecCCCc----chhHHHHHcCCC-CCCeeeEeccchHH
Q psy13271          1 FQKPK---EDTDYPELAKEALIKALDD-AGISINQVQQACCGYVYGDST----CGQRALYQIGMT-GIPVFNVNNNCSTG   71 (110)
Q Consensus         1 f~~~~---~~~~~~~l~~~a~~~al~~-agl~~~~id~vi~~~~~~~~~----~~~~~a~~lg~~-~~~~~~i~~~C~sg   71 (110)
                      |||+.   ++.++.+|+.++++++|++ +++++++||.+++|+..+...    .+..++..+|+. .+|+++|+++|+||
T Consensus        13 fgk~~g~~~~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~~~CaSG   92 (400)
T TIGR02430        13 IGRYGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVNRLCGSG   92 (400)
T ss_pred             cccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEeechhhhH
Confidence            56643   4788899999999999995 799999999999998753221    223467789997 59999999999999


Q ss_pred             HHHHHHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         72 SSALMLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        72 ~~al~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      +.|+..|++.|++| +|.+|++|+|+||+.|+
T Consensus        93 ~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~  124 (400)
T TIGR02430        93 LDAIGMAARAIKAGEADLLIAGGVESMSRAPF  124 (400)
T ss_pred             HHHHHHHHHHHHCCCCCEEEEeccccccCCcc
Confidence            99999999999999 99999999999998874

Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.

>PTZ00455 3-ketoacyl-CoA thiolase; Provisional

Probab=99.74  E-value=3e-17  Score=121.12  Aligned_cols=97  Identities=25%  Similarity=0.356  Sum_probs=82.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccc--cCeEEEEeecCCCc-----chhHHH-------HHcCCCCCCeeeEeccchHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQ--VQQACCGYVYGDST-----CGQRAL-------YQIGMTGIPVFNVNNNCSTG   71 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~--id~vi~~~~~~~~~-----~~~~~a-------~~lg~~~~~~~~i~~~C~sg   71 (110)
                      ++.+..+|+.+|++++|+++|++++|  ||.+++++..+...     ....++       ..+|+..+|+++++++|+||
T Consensus        44 ~~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG  123 (438)
T PTZ00455         44 ENKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEGACASG  123 (438)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEECcCHHH
Confidence            57899999999999999999999999  99999987654321     122233       33466678999999999999


Q ss_pred             HHHHHHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         72 SSALMLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        72 ~~al~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      ..|+..|+++|++| +|++|++|+|++++.++
T Consensus       124 ~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~  155 (438)
T PTZ00455        124 GLAVQSAWEALLAGTSDIALVVGVEVQTTVSA  155 (438)
T ss_pred             HHHHHHHHHHHHCCCCCEEEEEEEeecccCcc
Confidence            99999999999999 99999999999988764

>PRK08313 acetyl-CoA acetyltransferase; Provisional

Probab=99.74  E-value=3.6e-17  Score=119.12  Aligned_cols=97  Identities=28%  Similarity=0.402  Sum_probs=84.3

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCC-----cchhHHHHHcCCCCCCeeeEeccchHHHHHHH
Q psy13271          2 QKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDS-----TCGQRALYQIGMTGIPVFNVNNNCSTGSSALM   76 (110)
Q Consensus         2 ~~~~~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~-----~~~~~~a~~lg~~~~~~~~i~~~C~sg~~al~   76 (110)
                      +++ +++++.+|+.+|+++||+++|++++|||.+++++ .++.     ..+..+++.||+.+.++++++++|+++..++.
T Consensus        17 ~~~-~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl~~~~~~~v~~~casg~~al~   94 (386)
T PRK08313         17 AKR-QDVSMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGATGKPLIRVHTAGSVGGSTAV   94 (386)
T ss_pred             ccC-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCCCCCceEEEeccCHHHHHHHH
Confidence            444 5789999999999999999999999999999886 3332     23356788999988899999999999999999


Q ss_pred             HHHHHHHcC-CCeEEEEeeccCCCC
Q psy13271         77 LAKQFIESG-SDCTLALGFEKMEKG  100 (110)
Q Consensus        77 ~A~~~i~sG-~~~vlv~g~e~~s~~  100 (110)
                      .|+.+|++| +++|||+++|.+++.
T Consensus        95 ~A~~~I~sG~~~~vLVvg~e~~s~~  119 (386)
T PRK08313         95 VAASLVQSGVYRRVLAVAWEKQSES  119 (386)
T ss_pred             HHHHHHHCCCCCEEEEEEEEEccCC
Confidence            999999999 999999999988654

>PRK06366 acetyl-CoA acetyltransferase; Provisional

Probab=99.74  E-value=4e-17  Score=118.94  Aligned_cols=102  Identities=27%  Similarity=0.389  Sum_probs=86.2

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc---chhHHHHHcCCC-CCCeeeEeccchHHHH
Q psy13271          1 FQKPK---EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDST---CGQRALYQIGMT-GIPVFNVNNNCSTGSS   73 (110)
Q Consensus         1 f~~~~---~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~---~~~~~a~~lg~~-~~~~~~i~~~C~sg~~   73 (110)
                      |+|+.   ++.++.+|+.++++++|+|+|++++|||.+++++..+...   ....++..+|+. ++|.++++++|+||+.
T Consensus        14 ~gr~~g~~~~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~~~caSg~~   93 (388)
T PRK06366         14 IGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVNVVCASGML   93 (388)
T ss_pred             cccCCCcccCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeeechhhHHHH
Confidence            56643   2589999999999999999999999999999987643321   123466789996 5899999999999999


Q ss_pred             HHHHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         74 ALMLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        74 al~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      ++..|++.|++| +|++|++|+|++++.++
T Consensus        94 av~~Aa~~I~sG~~d~vla~G~e~ms~~~~  123 (388)
T PRK06366         94 AVESAAREIMLGERDLVIAGGMENMSNAPF  123 (388)
T ss_pred             HHHHHHHHHhcCCCCEEEEEeeEccccCcc
Confidence            999999999999 99999999999987654

>PRK07516 acetyl-CoA acetyltransferase; Provisional

Probab=99.74  E-value=3.9e-17  Score=118.96  Aligned_cols=101  Identities=27%  Similarity=0.296  Sum_probs=84.8

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc----ch-hHHHHHcCCCCCCeeeEeccchHHHHHH
Q psy13271          1 FQKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDST----CG-QRALYQIGMTGIPVFNVNNNCSTGSSAL   75 (110)
Q Consensus         1 f~~~~~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~----~~-~~~a~~lg~~~~~~~~i~~~C~sg~~al   75 (110)
                      |+|+ ++++..+|+.+|++++|+++|+++++||.+++++..++..    .. ..+...+|++..|+++++++|+||..+|
T Consensus        14 fgr~-~~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~~~p~~~v~~~CaSg~~Al   92 (389)
T PRK07516         14 FGKL-DAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALRFKPATRVENACATGSAAV   92 (389)
T ss_pred             eeec-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCCCCceeeeccccHHHHHHH
Confidence            5665 6889999999999999999999999999999987643321    11 1223456777789999999999999999


Q ss_pred             HHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         76 MLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        76 ~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      ..|+.+|++| +|++|++++|++++.+.
T Consensus        93 ~~A~~~I~sG~~d~vLvvg~e~~s~~~~  120 (389)
T PRK07516         93 YAALDAIEAGRARIVLVVGAEKMTATPT  120 (389)
T ss_pred             HHHHHHHHCCCCCEEEEEEehhhccCcc
Confidence            9999999999 99999999999987654

>PRK08170 acetyl-CoA acetyltransferase; Provisional

Probab=99.74  E-value=4.5e-17  Score=119.92  Aligned_cols=102  Identities=25%  Similarity=0.344  Sum_probs=86.3

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc---chhHHHHHcCCC-CCCeeeEeccchHHHH
Q psy13271          1 FQKPK---EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDST---CGQRALYQIGMT-GIPVFNVNNNCSTGSS   73 (110)
Q Consensus         1 f~~~~---~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~---~~~~~a~~lg~~-~~~~~~i~~~C~sg~~   73 (110)
                      |+|+.   ++.++.+|+.+|++++|+++|+++++||.+++++..+...   .+..++..+|+. ++|.++++++|+|+..
T Consensus        15 ~g~~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~~~CaSg~~   94 (426)
T PRK08170         15 FLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQRNCASGMQ   94 (426)
T ss_pred             ccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeeccchhhHHHH
Confidence            55532   3579999999999999999999999999999987653221   123467889995 6899999999999999


Q ss_pred             HHHHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         74 ALMLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        74 al~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      ++..|+++|++| +|++|++|+|++|+.++
T Consensus        95 al~~A~~~I~sG~~d~vLv~G~E~ms~~~~  124 (426)
T PRK08170         95 ALDSAAANIALGRADLVLAGGVEAMSHAPL  124 (426)
T ss_pred             HHHHHHHHHHCCCCCEEEEEEEecccCCcc
Confidence            999999999999 99999999999887653

>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=99.73  E-value=5.2e-17  Score=118.51  Aligned_cols=95  Identities=39%  Similarity=0.646  Sum_probs=83.1

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCC---cchh-HHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHH
Q psy13271          7 DTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDS---TCGQ-RALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFI   82 (110)
Q Consensus         7 ~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~---~~~~-~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i   82 (110)
                      ...+.+|+.+|++++|+++++++++||.+++++..+++   ..+. .+.+.+|+.++|+++++++|+||+.++..|+++|
T Consensus        20 ~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~~~p~~~V~~~Casg~~al~~A~~~I   99 (393)
T cd00826          20 NDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQLI   99 (393)
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCCCCcEEEecchhHHHHHHHHHHHHHH
Confidence            45679999999999999999999999999999887653   2222 2556788888899999999999999999999999


Q ss_pred             HcC-CCeEEEEeeccCCCCC
Q psy13271         83 ESG-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        83 ~sG-~~~vlv~g~e~~s~~~  101 (110)
                      ++| ++++|++|+|+++..+
T Consensus       100 ~sG~~~~vlv~g~e~~s~~~  119 (393)
T cd00826         100 AGGDANCILAGGFEKMETSA  119 (393)
T ss_pred             HCCCCCEEEEEeeeccccCc
Confidence            999 9999999999998765

There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PRK07851 acetyl-CoA acetyltransferase; Provisional

Probab=99.73  E-value=3.8e-17  Score=119.68  Aligned_cols=96  Identities=20%  Similarity=0.268  Sum_probs=83.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHc-CCCccccCeEEEEeecCC----CcchhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDA-GISINQVQQACCGYVYGD----STCGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQ   80 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~a-gl~~~~id~vi~~~~~~~----~~~~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~   80 (110)
                      ++.++.+|+.+|++++|+++ |++++|||.+++++..+.    ...+..++..+|+.++|+++++++|+||..++..|++
T Consensus        23 ~~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~~~p~~~v~~~caSG~~av~~Aa~  102 (406)
T PRK07851         23 KDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYDFLPGTTVNRYCSSSLQTTRMAFH  102 (406)
T ss_pred             CCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCCCCCeeeeeccchhHHHHHHHHHH
Confidence            46889999999999999997 999999999999865432    1223457788999878999999999999999999999


Q ss_pred             HHHcC-CCeEEEEeeccCCCCC
Q psy13271         81 FIESG-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        81 ~i~sG-~~~vlv~g~e~~s~~~  101 (110)
                      +|++| +|++||+|+|++++.+
T Consensus       103 ~I~sG~~d~vLv~G~e~~s~~~  124 (406)
T PRK07851        103 AIKAGEGDVFISAGVETVSRFA  124 (406)
T ss_pred             HHHCCCCCEEEEeeEEecccCc
Confidence            99999 9999999999987765

>PRK06289 acetyl-CoA acetyltransferase; Provisional

Probab=99.73  E-value=4.7e-17  Score=119.02  Aligned_cols=102  Identities=25%  Similarity=0.426  Sum_probs=83.4

Q ss_pred             CCCCC--CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch-----hH-HHHHcCCCCCCeeeEeccchHHH
Q psy13271          1 FQKPK--EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG-----QR-ALYQIGMTGIPVFNVNNNCSTGS   72 (110)
Q Consensus         1 f~~~~--~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~-----~~-~a~~lg~~~~~~~~i~~~C~sg~   72 (110)
                      |+|+.  +++++.+|+.+|++++|+++|+++++||.+|+++..++....     .. .....++.++|+++++++|+++.
T Consensus        15 ~~r~~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~Casg~   94 (403)
T PRK06289         15 FARNWTKEGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHPALWGVPASRHEAACASGS   94 (403)
T ss_pred             cccccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHhhcCCCCceeecccccHHHH
Confidence            45532  578999999999999999999999999999998765543221     11 12334565678999999999999


Q ss_pred             HHHHHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         73 SALMLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        73 ~al~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      .+|..|+.+|++| +++|||+++|++++.+.
T Consensus        95 ~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~  125 (403)
T PRK06289         95 VATLAAMADLRAGRYDVALVVGVELMKTVPG  125 (403)
T ss_pred             HHHHHHHHHHHcCCCCEEEEEEEEecCCCCc
Confidence            9999999999999 99999999999887653

>PRK08304 stage V sporulation protein AD; Validated

Probab=99.73  E-value=3.8e-17  Score=115.76  Aligned_cols=100  Identities=18%  Similarity=0.285  Sum_probs=84.2

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHH
Q psy13271          1 FQKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQ   80 (110)
Q Consensus         1 f~~~~~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~   80 (110)
                      ||+...+....+|+.+|+++||+++|++++|||.+++++..........+++.+|+   |.++++++|+++..+|..|+.
T Consensus        47 ~Ge~swEkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q~~sAs~vA~~LGI---Pa~dV~gACST~~~AL~lAa~  123 (337)
T PRK08304         47 CGEKSWEKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQIISANFAARELGI---PFLGLYGACSTMMESLALGSM  123 (337)
T ss_pred             cCCcCccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCcchHHHHHHHhCC---cEEEEeccCHHHHHHHHHHHH
Confidence            34333467888999999999999999999999999999764333344567788876   899999999999999999999


Q ss_pred             HHHcC-CCeEEEEeeccCCCCCCC
Q psy13271         81 FIESG-SDCTLALGFEKMEKGSLG  103 (110)
Q Consensus        81 ~i~sG-~~~vlv~g~e~~s~~~~~  103 (110)
                      +|++| +++||+++++.+++....
T Consensus       124 lI~SG~ad~VLVV~Ssh~s~aerq  147 (337)
T PRK08304        124 LIDGGFADRVLAATSSHFATAERQ  147 (337)
T ss_pred             HHhcCCCCEEEEEEcchhhhhhhh
Confidence            99999 999999999988776433

>PRK06064 acetyl-CoA acetyltransferase; Provisional

Probab=99.73  E-value=5.8e-17  Score=118.00  Aligned_cols=100  Identities=31%  Similarity=0.394  Sum_probs=86.2

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc-----chhHHHHHcCCCCCCeeeEeccchHHHHHH
Q psy13271          1 FQKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDST-----CGQRALYQIGMTGIPVFNVNNNCSTGSSAL   75 (110)
Q Consensus         1 f~~~~~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~-----~~~~~a~~lg~~~~~~~~i~~~C~sg~~al   75 (110)
                      |+++ +++++.+|+.+|++++|+++|+++++||.+++++..++..     ....++..+|++..+.++++++|+|+..+|
T Consensus        14 ~~~~-~~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~~~~~~~v~~aCasg~~ai   92 (389)
T PRK06064         14 FGEL-WDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLAPIPATRVEAACASGGAAL   92 (389)
T ss_pred             ceec-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCCCCCeeEEeCCcHHHHHHH
Confidence            4444 5789999999999999999999999999999987654432     223467889998779999999999999999


Q ss_pred             HHHHHHHHcC-CCeEEEEeeccCCCCC
Q psy13271         76 MLAKQFIESG-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        76 ~~A~~~i~sG-~~~vlv~g~e~~s~~~  101 (110)
                      ..|+++|++| ++++||++.|.+++.+
T Consensus        93 ~~A~~~I~sG~~~~vLv~G~e~~s~~~  119 (389)
T PRK06064         93 RQAYLAVASGEADVVLAAGVEKMTDVP  119 (389)
T ss_pred             HHHHHHHHCCCCCEEEEEEEEecccCc
Confidence            9999999999 9999999999988665

>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional

Probab=99.73  E-value=6.5e-17  Score=115.21  Aligned_cols=96  Identities=29%  Similarity=0.333  Sum_probs=85.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch--hHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG--QRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIE   83 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~--~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~   83 (110)
                      ++++..+|+.+|++++|+++|+++++||.++++++.++...+  ..++..||+++.++++++++|++++.+|.+|.++|+
T Consensus        47 ~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~~~~~~v~~~Lg~~~~~~~~v~~~Casg~~al~~A~~~i~  126 (326)
T CHL00203         47 SSTSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGATRAVAFDITAACSGFILALVTATQFIQ  126 (326)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCchHHHHHHHhCCCCCceeeecccchhHHHHHHHHHHHHH
Confidence            567899999999999999999999999999999876654322  346788999888999999999999999999999999


Q ss_pred             cC-CCeEEEEeeccCCCCC
Q psy13271         84 SG-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        84 sG-~~~vlv~g~e~~s~~~  101 (110)
                      +| ++++||+++|.+++..
T Consensus       127 sg~~~~~Lvv~~e~~s~~~  145 (326)
T CHL00203        127 NGSYKNILVVGADTLSKWI  145 (326)
T ss_pred             cCCCCEEEEEEehhhhCcC
Confidence            99 9999999999988654

>PRK06365 acetyl-CoA acetyltransferase; Provisional

Probab=99.73  E-value=7.4e-17  Score=118.87  Aligned_cols=102  Identities=25%  Similarity=0.403  Sum_probs=85.2

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc----chhHHHHHcCCCCCCeeeEeccchHHHHHHH
Q psy13271          1 FQKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDST----CGQRALYQIGMTGIPVFNVNNNCSTGSSALM   76 (110)
Q Consensus         1 f~~~~~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~----~~~~~a~~lg~~~~~~~~i~~~C~sg~~al~   76 (110)
                      |+|..++.+..+|+.+|++++|+++|++++|||.+++++......    ....++..+|++++|+++++++|+|+..++.
T Consensus        28 fgr~~~~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~~~~~~v~~~~aSg~~ai~  107 (430)
T PRK06365         28 FDKASPYMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVPKPSKRIEGGGATGGLAFQ  107 (430)
T ss_pred             ccccCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCCCceEEEeCCcHHHHHHHH
Confidence            566434678899999999999999999999999988765432111    1223568899988899999999999999999


Q ss_pred             HHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         77 LAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        77 ~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      .|+..|++| +++||++++|++++.++
T Consensus       108 ~A~~~I~sG~~~~vLv~G~e~~s~~~~  134 (430)
T PRK06365        108 AGYEEIASGRMDCVAVYGFETMSHVNT  134 (430)
T ss_pred             HHHHHHHcCCCCEEEEEEeeecccccc
Confidence            999999999 99999999999887653

>PRK06065 acetyl-CoA acetyltransferase; Provisional

Probab=99.72  E-value=1.2e-16  Score=116.66  Aligned_cols=97  Identities=29%  Similarity=0.281  Sum_probs=83.5

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc-----chhHHHHHcCCCCCCeeeEeccchHHHHHH
Q psy13271          1 FQKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDST-----CGQRALYQIGMTGIPVFNVNNNCSTGSSAL   75 (110)
Q Consensus         1 f~~~~~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~-----~~~~~a~~lg~~~~~~~~i~~~C~sg~~al   75 (110)
                      |+++ .+++..+|+.+|++++|+++|++++|||.+++++. ++..     ....+++.+|+.+.+.++++++|++|..++
T Consensus        21 ~~~~-~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~-~~~~~~~~~~a~~l~~~lG~~~~~~~~V~~~gasG~~al   98 (392)
T PRK06065         21 FRRR-LLETPQELAWEAASKALDEAGLELKDIDCVVIGSA-PDAFDGVHMKGEYLSHGSGGIRKPVSRVYVGGATGVMTA   98 (392)
T ss_pred             CcCC-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecc-CCcccccccHHHHHHHHcCCCCCCeEEEecCchhHHHHH
Confidence            5665 67899999999999999999999999999998753 2222     233577889988789999999999999999


Q ss_pred             HHHHHHHHcC-CCeEEEEeeccCCC
Q psy13271         76 MLAKQFIESG-SDCTLALGFEKMEK   99 (110)
Q Consensus        76 ~~A~~~i~sG-~~~vlv~g~e~~s~   99 (110)
                      ..|+.+|++| +|+|||+++|+++.
T Consensus        99 ~~A~~~I~sG~ad~vLVvg~e~~~~  123 (392)
T PRK06065         99 IAGWYHVASGLCQKVLAVAEEKMSP  123 (392)
T ss_pred             HHHHHHHhCCCCCEEEEEEeecccc
Confidence            9999999999 99999999999754

>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.72  E-value=1.6e-16  Score=112.85  Aligned_cols=96  Identities=22%  Similarity=0.296  Sum_probs=85.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFI   82 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i   82 (110)
                      ++++..+|+.+|++++|+++|+++++||.+++++..+++..+   ..++..+|+++.++++++++|+++..+|..|.++|
T Consensus        49 ~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~~~~~~~v~~~C~~~~~al~~A~~~l  128 (325)
T PRK12879         49 VEEYTSDLAIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIPNAAAFDINAACAGFLYGLETANGLI  128 (325)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCCCcEEEECccchHHHHHHHHHHHHH
Confidence            467899999999999999999999999999998877655433   35678899987789999999999999999999999


Q ss_pred             HcC-CCeEEEEeeccCCCCC
Q psy13271         83 ESG-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        83 ~sG-~~~vlv~g~e~~s~~~  101 (110)
                      ++| .+++||+++|.++...
T Consensus       129 ~~g~~~~~Lvv~~e~~s~~~  148 (325)
T PRK12879        129 TSGLYKKVLVIGAERLSKVT  148 (325)
T ss_pred             HcCCCCEEEEEEehhhcCcC
Confidence            999 9999999999987653

>PRK06059 lipid-transfer protein; Provisional

Probab=99.71  E-value=1.2e-16  Score=116.81  Aligned_cols=97  Identities=29%  Similarity=0.378  Sum_probs=83.9

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc----chhHHHHHcCCCCCCeeeEeccchHHHHHHH
Q psy13271          1 FQKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDST----CGQRALYQIGMTGIPVFNVNNNCSTGSSALM   76 (110)
Q Consensus         1 f~~~~~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~----~~~~~a~~lg~~~~~~~~i~~~C~sg~~al~   76 (110)
                      |+|+  +.+..+|+.+|++++|+++|+++++||.+++++..++..    .+..++..+|+++.+.++++++|+++..+|.
T Consensus        16 ~~r~--~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~~~~~~~v~~~Casg~~al~   93 (399)
T PRK06059         16 WGKW--GRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWNGAPVSSSYAACASGSQALQ   93 (399)
T ss_pred             cCCC--CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCCCCceecccchhHHHHHHHH
Confidence            5553  568899999999999999999999999999876543321    1245778899987889999999999999999


Q ss_pred             HHHHHHHcC-CCeEEEEeeccCCC
Q psy13271         77 LAKQFIESG-SDCTLALGFEKMEK   99 (110)
Q Consensus        77 ~A~~~i~sG-~~~vlv~g~e~~s~   99 (110)
                      .|+++|++| ++++||+++|.++.
T Consensus        94 ~A~~~I~sG~~~~vLvvg~e~~s~  117 (399)
T PRK06059         94 SARAQILAGLCDVALVVGADTTPK  117 (399)
T ss_pred             HHHHHHHCCCCCEEEEEEEcccCC
Confidence            999999999 99999999999875

>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.71  E-value=1.1e-16  Score=116.23  Aligned_cols=94  Identities=26%  Similarity=0.320  Sum_probs=84.2

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchh---HHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHHc
Q psy13271          8 TDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQ---RALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus         8 ~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~---~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~s   84 (110)
                      .+..+|+.+|++++|+++|++++|||.+|+++..+++..+.   .++..+|+++.++++++++|++++.+|..|..+|++
T Consensus        61 ~~~~~La~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~v~~~Cas~~~al~~A~~~i~s  140 (378)
T PRK06816         61 HSNAQMAAEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAPPIEVVSSAGVCAAGMMALKYAYLSVKA  140 (378)
T ss_pred             CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCCCCceeeecCcCHHHHHHHHHHHHHHHC
Confidence            57899999999999999999999999999998877655443   466789998789999999999999999999999999


Q ss_pred             C-CCeEEEEeeccCCCCC
Q psy13271         85 G-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        85 G-~~~vlv~g~e~~s~~~  101 (110)
                      | .+++||+++|.+|+..
T Consensus       141 g~~~~vLvv~~E~~s~~~  158 (378)
T PRK06816        141 GESRNAVATASELASRWF  158 (378)
T ss_pred             CCCCEEEEEeEccchhhh
Confidence            9 9999999999987653

>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III

Probab=99.71  E-value=1.6e-16  Score=115.49  Aligned_cols=97  Identities=25%  Similarity=0.284  Sum_probs=86.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc--hhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC--GQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIE   83 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~--~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~   83 (110)
                      ++++..+|+.+|++++|+++|++++|||.+|+++.+++..+  ...+++.||+++.++++++.+|++++.+|.+|.++|+
T Consensus        92 ~~~~~~~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~~~~~~dv~~~Ca~~~~aL~~A~~~l~  171 (379)
T PLN02326         92 GDETLTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCTNALAFDLTAACSGFVLGLVTAARFIR  171 (379)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCCCCceeeccccchHHHHHHHHHHHHHH
Confidence            56889999999999999999999999999999987665433  3457788999888999999999999999999999999


Q ss_pred             cC-CCeEEEEeeccCCCCCC
Q psy13271         84 SG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        84 sG-~~~vlv~g~e~~s~~~~  102 (110)
                      +| ++++||+++|.+++...
T Consensus       172 ~g~~~~vLVv~~e~~s~~~~  191 (379)
T PLN02326        172 GGGYKNVLVIGADALSRYVD  191 (379)
T ss_pred             cCCCCEEEEEEechhcCCCC
Confidence            99 99999999999886543

>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.71  E-value=1.6e-16  Score=113.03  Aligned_cols=96  Identities=20%  Similarity=0.219  Sum_probs=86.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFI   82 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i   82 (110)
                      ++++..+|+.+|++++|+++|+++++||.||++++++++..|   ..+++.||+++.++++++++|++++.+|..|.+++
T Consensus        48 ~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~~~~~~di~~~C~g~~~aL~~A~~~l  127 (326)
T PRK05963         48 PDETLSDLAASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQNSGAIDLAGACAGFLYALVLADGFV  127 (326)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCCCCceeeccchhhHHHHHHHHHHHHH
Confidence            568999999999999999999999999999999988876554   35788999988899999999999999999999999


Q ss_pred             HcCCCeEEEEeeccCCCCC
Q psy13271         83 ESGSDCTLALGFEKMEKGS  101 (110)
Q Consensus        83 ~sG~~~vlv~g~e~~s~~~  101 (110)
                      +++.+++||+++|.+++..
T Consensus       128 ~~~~~~aLVv~~d~~s~~~  146 (326)
T PRK05963        128 RAQGKPVLVVAANILSRRI  146 (326)
T ss_pred             HcCCCeEEEEEechhhccC
Confidence            9887789999999877543

>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.71  E-value=1.4e-16  Score=114.81  Aligned_cols=97  Identities=19%  Similarity=0.159  Sum_probs=86.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchh---HHHHHcCCC-CCCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQ---RALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~---~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      ++++..+|+.+|++++|+++|++++|||.||+++.++++..|.   .+++.||++ ++++++++.+|++++.+|..|..+
T Consensus        56 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~~~C~g~~~aL~~A~~~  135 (353)
T PRK12880         56 ENTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLGQACAGYLYGLFVAHSL  135 (353)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehhhhhHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999998876553   577899996 578999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKGSLG  103 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~~~~  103 (110)
                      +++| .+ +||+++|..|+....
T Consensus       136 i~~~~~~-~LVv~~e~~S~~~~~  157 (353)
T PRK12880        136 IQSGLGK-ILLICGDTLSKFIHP  157 (353)
T ss_pred             HHcCCCC-EEEEEehhhhccCCc
Confidence            9999 99 999999998766543

>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.71  E-value=1.3e-16  Score=113.87  Aligned_cols=95  Identities=26%  Similarity=0.243  Sum_probs=84.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      +++++.+|+.+|++++|+++|+++++||.+++++..+++..+   ..+++.+|++ .+++++++++|+++..||.+|.++
T Consensus        57 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~~~~~al~~A~~~  136 (338)
T PRK09258         57 EGTQLSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSNACLGFLNGMLDAANM  136 (338)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhhhhHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999877665544   3567889997 478999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKG  100 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~  100 (110)
                      |++| ++++||+++|..+..
T Consensus       137 i~~g~~~~~Lvv~~e~~s~~  156 (338)
T PRK09258        137 IELGQIDYALVVSGESAREI  156 (338)
T ss_pred             HHcCCCCEEEEEEecccchh
Confidence            9999 999999999987654

>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.71  E-value=2.3e-16  Score=111.73  Aligned_cols=95  Identities=29%  Similarity=0.349  Sum_probs=84.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFI   82 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i   82 (110)
                      ++++..+|+.+|++++|+++|+++++||.+++++..++...+   ..++..+|+.+.++++++++|++++.+|..|.++|
T Consensus        48 ~~~~~~~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~~~~~~~v~~~Casg~~al~~A~~~i  127 (319)
T PRK09352         48 PDETTSDLATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAKNAAAFDLSAACSGFVYALSTADQFI  127 (319)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCCCCcEeeccccchhHHHHHHHHHHHH
Confidence            578999999999999999999999999999998876654322   45778899987899999999999999999999999


Q ss_pred             HcC-CCeEEEEeeccCCCC
Q psy13271         83 ESG-SDCTLALGFEKMEKG  100 (110)
Q Consensus        83 ~sG-~~~vlv~g~e~~s~~  100 (110)
                      ++| ++++||+++|.+++.
T Consensus       128 ~~g~~~~vLvv~~e~~s~~  146 (319)
T PRK09352        128 RSGAYKNVLVIGAEKLSRI  146 (319)
T ss_pred             HcCCCCEEEEEEehhhccc
Confidence            999 999999999998754

>PLN02644 acetyl-CoA C-acetyltransferase

Probab=99.70  E-value=3.1e-16  Score=114.50  Aligned_cols=102  Identities=28%  Similarity=0.356  Sum_probs=84.5

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCC---cchhHHHHHcCCC-CCCeeeEeccchHHHH
Q psy13271          1 FQKPK---EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDS---TCGQRALYQIGMT-GIPVFNVNNNCSTGSS   73 (110)
Q Consensus         1 f~~~~---~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~---~~~~~~a~~lg~~-~~~~~~i~~~C~sg~~   73 (110)
                      |+|+.   ++.++.+|+.++++++|+++|+++++||.+++++.....   .....++..+|+. ..|+++++++|+|+..
T Consensus        13 ~g~~~~~~~~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~~~caSg~~   92 (394)
T PLN02644         13 IGGFLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVNKVCASGMK   92 (394)
T ss_pred             ccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEeccchHHHH
Confidence            55542   358899999999999999999999999999998753211   1122366778996 4789999999999999


Q ss_pred             HHHHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         74 ALMLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        74 al~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      ++..|+++|++| +|++|++|+|++++.++
T Consensus        93 av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~  122 (394)
T PLN02644         93 AVMLAAQSIQLGINDVVVAGGMESMSNAPK  122 (394)
T ss_pred             HHHHHHHHHHcCCCCEEEEEeEEecCCCcc
Confidence            999999999999 99999999999987653

>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative

Probab=99.70  E-value=1.8e-16  Score=113.92  Aligned_cols=94  Identities=20%  Similarity=0.268  Sum_probs=83.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      ++++..+|+.+|++++|+++|+++++||.+++++..+++..+   ..+++.+|++ ..++++++++|+++..+|..|..+
T Consensus        46 ~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~~aC~g~~~al~~A~~~  125 (345)
T TIGR00748        46 LDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLEFACKAGTAGIQACMGL  125 (345)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999998877665433   3467889996 578999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCC
Q psy13271         82 IESG-SDCTLALGFEKMEK   99 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~   99 (110)
                      |++| ++++||+++|.++.
T Consensus       126 i~sg~~~~vLVv~~d~~~~  144 (345)
T TIGR00748       126 VASGMIKYGLAIGADTAQG  144 (345)
T ss_pred             HHcCCCCEEEEEEEeeccc
Confidence            9999 99999999998863

Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.

>PRK09268 acetyl-CoA acetyltransferase; Provisional

Probab=99.70  E-value=3.5e-16  Score=115.21  Aligned_cols=102  Identities=20%  Similarity=0.354  Sum_probs=83.9

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCC---cchhHHHHHcCC-CCCCeeeEeccchHHHH
Q psy13271          1 FQKPK---EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDS---TCGQRALYQIGM-TGIPVFNVNNNCSTGSS   73 (110)
Q Consensus         1 f~~~~---~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~---~~~~~~a~~lg~-~~~~~~~i~~~C~sg~~   73 (110)
                      |+++.   .+.++.+|+.++++++|+++++++++||.+++|+..+..   .....++...|+ ...|+++++++|+||..
T Consensus        19 fg~~~g~l~~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~~~CaSG~~   98 (427)
T PRK09268         19 FARSNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQQACGTGLE   98 (427)
T ss_pred             ccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeeechhhHHHH
Confidence            55542   468999999999999999999999999999999865321   112222333455 34799999999999999


Q ss_pred             HHHHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         74 ALMLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        74 al~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      ++..|+++|++| +|.+|++|+|++|+.|+
T Consensus        99 ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~  128 (427)
T PRK09268         99 AAILVANKIALGQIDSGIAGGVDTTSDAPI  128 (427)
T ss_pred             HHHHHHHHHHCCCCCEEEEeeEEccCCCcc
Confidence            999999999999 99999999999998775

>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.70  E-value=3.6e-16  Score=111.39  Aligned_cols=94  Identities=23%  Similarity=0.302  Sum_probs=83.4

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCC--CCeeeEeccchHHHHHHHHHHHH
Q psy13271          7 DTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTG--IPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         7 ~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~--~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      +++..+|+.+|++++|+++|++++|||.+|+++.+++...+   ..+++.+|+++  +++++++.+|+++..+|..|..+
T Consensus        49 ~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~al~~a~~~  128 (329)
T PRK07204         49 GETSSYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISYA  128 (329)
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEccchhHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999877665333   45778899974  68999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKG  100 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~  100 (110)
                      |++| ++++||+++|..+..
T Consensus       129 l~~g~~~~~Lvv~~e~~s~~  148 (329)
T PRK07204        129 IECGRYKRVLIISSEISSVG  148 (329)
T ss_pred             HHCCCCCEEEEEEeccccCC
Confidence            9999 999999999997754

>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III

Probab=99.69  E-value=3.4e-16  Score=110.92  Aligned_cols=95  Identities=29%  Similarity=0.437  Sum_probs=84.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFI   82 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i   82 (110)
                      +++++.+|+.+|++++|+++|+++++||.+++++..+++..+   ..++..+|+++.++++++++|+++..+|..|..+|
T Consensus        47 ~~~~~~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~~~~~~~v~~~C~s~~~al~~A~~~i  126 (318)
T TIGR00747        47 DDETSSTMGFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIKGIPAFDLSAACAGFIYALSVAKQYI  126 (318)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCCCCcEeehhhhhHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999998877654322   35778899988899999999999999999999999


Q ss_pred             HcC-CCeEEEEeeccCCCC
Q psy13271         83 ESG-SDCTLALGFEKMEKG  100 (110)
Q Consensus        83 ~sG-~~~vlv~g~e~~s~~  100 (110)
                      ++| ++++||+++|.++..
T Consensus       127 ~~g~~~~~Lvv~~e~~~~~  145 (318)
T TIGR00747       127 ESGKYKTVLVVGAEKLSST  145 (318)
T ss_pred             HcCCCCEEEEEEehhhcCc
Confidence            999 999999999997644

Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.

>PRK06025 acetyl-CoA acetyltransferase; Provisional

Probab=99.69  E-value=3.8e-16  Score=114.43  Aligned_cols=97  Identities=21%  Similarity=0.217  Sum_probs=85.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH----HHHHcCCC-CCCeeeEeccchHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQR----ALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQ   80 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~----~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~   80 (110)
                      ++.++.+|+..+++++|+++++++++||.||+|+..+....+.+    .+-..|+. .+|+++|+..|+||+.++..|++
T Consensus        25 ~~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvnr~C~Sgl~ai~~aa~  104 (417)
T PRK06025         25 AHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLDRFCGGGITSVNLAAA  104 (417)
T ss_pred             CCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeeccccchHHHHHHHHHH
Confidence            78999999999999999999999999999999988654332222    33456885 58999999999999999999999


Q ss_pred             HHHcC-CCeEEEEeeccCCCCCC
Q psy13271         81 FIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        81 ~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      .|++| .|.+|++|+|+||+.|+
T Consensus       105 ~I~~G~~~~~laGG~EsmS~~P~  127 (417)
T PRK06025        105 QIMSGMEDLVIAGGTEMMSYTAA  127 (417)
T ss_pred             HHHcCCCCEEEEeeeeccCCCcc
Confidence            99999 99999999999999996

>PRK06445 acetyl-CoA acetyltransferase; Provisional

Probab=99.69  E-value=3.5e-16  Score=114.20  Aligned_cols=97  Identities=20%  Similarity=0.375  Sum_probs=80.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc---chhHHH-HHcCC-CCCCeeeEeccchHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDST---CGQRAL-YQIGM-TGIPVFNVNNNCSTGSSALMLAKQ   80 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~---~~~~~a-~~lg~-~~~~~~~i~~~C~sg~~al~~A~~   80 (110)
                      ++.++.+|+.+|++++|+++|++++|||.+++++..++..   .....+ ...++ .++|+++++++|+||..++.+|++
T Consensus        28 ~~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~~~~p~~~V~~~CaSg~~ai~~A~~  107 (394)
T PRK06445         28 NNIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLPYNIPAMAVDRQCASSLTTVSIGAM  107 (394)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCCCCCcchhhhhhhHHHHHHHHHHHH
Confidence            4688999999999999999999999999999998776432   122221 12233 357999999999999999999999


Q ss_pred             HHHcC-CCeEEEEeeccCCCCCC
Q psy13271         81 FIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        81 ~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      +|++| +|++|++|+|++++.++
T Consensus       108 ~I~sG~~d~vLv~G~e~ms~~~~  130 (394)
T PRK06445        108 EIATGMADIVIAGGVEHMTRTPM  130 (394)
T ss_pred             HHHcCCCCEEEEeeecccccCcc
Confidence            99999 99999999999997764

>TIGR02445 fadA fatty oxidation complex, beta subunit FadA

Probab=99.68  E-value=2e-16  Score=115.18  Aligned_cols=98  Identities=21%  Similarity=0.232  Sum_probs=81.2

Q ss_pred             CCCCHHHHHHHHHHHHHHH-cCCCccccCeEEEEeecCCCcchhHH----HHHcCCCC-CCeeeEeccchHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDD-AGISINQVQQACCGYVYGDSTCGQRA----LYQIGMTG-IPVFNVNNNCSTGSSALMLAK   79 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~-agl~~~~id~vi~~~~~~~~~~~~~~----a~~lg~~~-~~~~~i~~~C~sg~~al~~A~   79 (110)
                      ++.++.+|+.++++++|++ +|+++++||.+++|+..+....+..+    ....|+.. +|+++++++|+||+.|+..|+
T Consensus        21 ~~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~~~CaSG~~Ai~~Aa  100 (385)
T TIGR02445        21 RNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVNRLCGSSMQALHDAA  100 (385)
T ss_pred             CCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhhhhhHHHHHHHHHHH
Confidence            5788999999999999996 59999999999999764322111122    23456643 788999999999999999999


Q ss_pred             HHHHcC-CCeEEEEeeccCCCCCCC
Q psy13271         80 QFIESG-SDCTLALGFEKMEKGSLG  103 (110)
Q Consensus        80 ~~i~sG-~~~vlv~g~e~~s~~~~~  103 (110)
                      +.|++| +|.+|++|+|+||+.++.
T Consensus       101 ~~I~sG~~d~vlagG~E~ms~~~~~  125 (385)
T TIGR02445       101 RAIMTGDADVCLVGGVEHMGHVPMM  125 (385)
T ss_pred             HHHHCCCCCEEEEeeehhcccCccc
Confidence            999999 999999999999988753

This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.

>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems

Probab=99.68  E-value=7.6e-16  Score=108.92  Aligned_cols=96  Identities=26%  Similarity=0.308  Sum_probs=85.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc---hhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC---GQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFI   82 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~---~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i   82 (110)
                      +++++.+|+.+|++++|+++|+++++||.+++++.+++...   ...++..+|+++.++++++++|+++..+|..|.++|
T Consensus        46 ~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~~~~~~~v~~~C~s~~~al~~A~~~i  125 (320)
T cd00830          46 PGETTSDLAVEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAKNAAAFDINAACSGFLYGLSTAAGLI  125 (320)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCcEeeccccchHHHHHHHHHHHHH
Confidence            45889999999999999999999999999999887765432   345778899987899999999999999999999999


Q ss_pred             HcC-CCeEEEEeeccCCCCC
Q psy13271         83 ESG-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        83 ~sG-~~~vlv~g~e~~s~~~  101 (110)
                      ++| .+++||+++|.+++..
T Consensus       126 ~~g~~~~vLvv~~e~~s~~~  145 (320)
T cd00830         126 RSGGAKNVLVVGAETLSRIL  145 (320)
T ss_pred             HcCCCCEEEEEEehhhcccc
Confidence            999 9999999999987653

It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.

>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed

Probab=99.68  E-value=6.1e-16  Score=112.76  Aligned_cols=97  Identities=21%  Similarity=0.297  Sum_probs=83.3

Q ss_pred             CCCCHHHHHHHHHHHHHHH-cCCCccccCeEEEEeecCCC----cchhHHHHHcCCC-CCCeeeEeccchHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDD-AGISINQVQQACCGYVYGDS----TCGQRALYQIGMT-GIPVFNVNNNCSTGSSALMLAK   79 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~-agl~~~~id~vi~~~~~~~~----~~~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~   79 (110)
                      ++.++.+|+.++++++|++ +|+++++||.+++|+..+..    ..+..++..+|+. .+|+++++++|+||+.++..|+
T Consensus        23 ~~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~~~caSG~~Ai~~A~  102 (387)
T PRK08947         23 RNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVNRLCGSSMQALHDAA  102 (387)
T ss_pred             CCCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeeechhHHHHHHHHHHH
Confidence            4788999999999999996 79999999999999764321    1222355678886 5899999999999999999999


Q ss_pred             HHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         80 QFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        80 ~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      .+|++| +|++|++|+|+||+.++
T Consensus       103 ~~I~sG~~d~vlv~G~E~ms~~~~  126 (387)
T PRK08947        103 RAIMTGDGDVFLIGGVEHMGHVPM  126 (387)
T ss_pred             HHHHCCCCCEEEEccccccccCcc
Confidence            999999 99999999999998775

>PRK06158 thiolase; Provisional

Probab=99.67  E-value=6.1e-16  Score=112.63  Aligned_cols=96  Identities=21%  Similarity=0.169  Sum_probs=81.7

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHH
Q psy13271          1 FQKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQ   80 (110)
Q Consensus         1 f~~~~~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~   80 (110)
                      |+|. +++++.+|+.+|++++|+++|++++|||.+++++... ...+..+++.+|+++.+.++++.+|+++..++..|+.
T Consensus        20 ~~~~-~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~-~~~~~~la~~lGl~~~~~~~~~~g~~s~~~al~~A~~   97 (384)
T PRK06158         20 LGEA-PGLSAMELLAQAAHRALADAGLTMADVDGLFTASPDD-ALWGLSVAEYLGIRPRFVDGTMIGGSSFLAHLLPAAL   97 (384)
T ss_pred             ceeC-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCC-CCcHHHHHHHcCCCCeeeccccCccHHHHHHHHHHHH
Confidence            5555 6889999999999999999999999999999886432 2234568889999877888899999999999999999


Q ss_pred             HHHcC-CCeEEEE-eeccCC
Q psy13271         81 FIESG-SDCTLAL-GFEKME   98 (110)
Q Consensus        81 ~i~sG-~~~vlv~-g~e~~s   98 (110)
                      +|++| +|+|||+ +.+.++
T Consensus        98 ~I~sG~~d~vLV~~g~~~~~  117 (384)
T PRK06158         98 ALEAGLCDVALICYGSNQRS  117 (384)
T ss_pred             HHHcCCCCEEEEeecccccc
Confidence            99999 9999987 555554

>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes

Probab=99.66  E-value=7.9e-16  Score=109.00  Aligned_cols=96  Identities=25%  Similarity=0.310  Sum_probs=85.3

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc---chhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHH
Q psy13271          7 DTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDST---CGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIE   83 (110)
Q Consensus         7 ~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~---~~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~   83 (110)
                      +++..+|+.+|++++|+++|+++++||.+++++..++..   ....++..+|++..++++++++|++++.+|..|.++|+
T Consensus        45 ~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~~~~~~~v~~~C~s~~~al~~A~~~i~  124 (324)
T cd00827          45 DEDVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLTNAEAFDLKQACYGGTAALQLAANLVE  124 (324)
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCCCCceeehhhhhHHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999988765432   23457788999778999999999999999999999999


Q ss_pred             cC-CCeEEEEeeccCCCCCC
Q psy13271         84 SG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        84 sG-~~~vlv~g~e~~s~~~~  102 (110)
                      +| .+++||+++|.++..+.
T Consensus       125 ~g~~~~vlvv~~e~~~~~~~  144 (324)
T cd00827         125 SGPWRYALVVASDIASYLLD  144 (324)
T ss_pred             cCCCCEEEEEEEHHhhhccc
Confidence            99 99999999999887764

They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.

>PRK07801 acetyl-CoA acetyltransferase; Provisional

Probab=99.65  E-value=1.4e-15  Score=110.59  Aligned_cols=101  Identities=23%  Similarity=0.312  Sum_probs=79.8

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHH----HHcCCC-CCCeeeEeccchHHH
Q psy13271          1 FQKPK---EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRAL----YQIGMT-GIPVFNVNNNCSTGS   72 (110)
Q Consensus         1 f~~~~---~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a----~~lg~~-~~~~~~i~~~C~sg~   72 (110)
                      |+|+.   ++.+..+|+.+|++++|+|+|++++|||.+++++..........++    -..|+. ..|.++++++|+|+.
T Consensus        14 f~~~~~~~~~~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~~acaSg~   93 (382)
T PRK07801         14 VGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVDRQCGSSQ   93 (382)
T ss_pred             ccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeecchhhhHH
Confidence            55542   2378999999999999999999999999999986521111111122    235663 468899999999999


Q ss_pred             HHHHHHHHHHHcC-CCeEEEEeeccCCCCC
Q psy13271         73 SALMLAKQFIESG-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        73 ~al~~A~~~i~sG-~~~vlv~g~e~~s~~~  101 (110)
                      .++..|+++|++| +|++|++|+|.+++.+
T Consensus        94 ~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~  123 (382)
T PRK07801         94 QAIHFAAQAVMSGTQDLVVAGGVQNMSQIP  123 (382)
T ss_pred             HHHHHHHHHHHCCCCCEEEEcchhhhcCCc
Confidence            9999999999999 9999999999887755

>PLN03168 chalcone synthase; Provisional

Probab=99.65  E-value=1.2e-15  Score=111.26  Aligned_cols=93  Identities=24%  Similarity=0.270  Sum_probs=81.0

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch--hHHHHHcCCCCCC--eeeEeccchHHHHHHHHHHHHHHc
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG--QRALYQIGMTGIP--VFNVNNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~--~~~a~~lg~~~~~--~~~i~~~C~sg~~al~~A~~~i~s   84 (110)
                      ...+|+.+|+++||+++|++++|||.||++++++...++  ..+++.||+++..  +++++.+|+++..+|..|..++++
T Consensus       100 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~~  179 (389)
T PLN03168        100 QVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAEN  179 (389)
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHHHh
Confidence            346799999999999999999999999999988755322  3577899997643  799999999999999999999999


Q ss_pred             C-CCeEEEEeeccCCCCC
Q psy13271         85 G-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        85 G-~~~vlv~g~e~~s~~~  101 (110)
                      | .++|||+++|.+|...
T Consensus       180 ~~~~~VLVV~~E~~S~~~  197 (389)
T PLN03168        180 NKGARVLAVASEVTAVTY  197 (389)
T ss_pred             CCCCEEEEEEEehhhhhc
Confidence            9 9999999999987643

>PLN02932 3-ketoacyl-CoA synthase

Probab=99.65  E-value=1.6e-15  Score=112.60  Aligned_cols=98  Identities=17%  Similarity=0.204  Sum_probs=86.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch--hHHHHHcCCC-CCCeeeEe-ccchHHHHHHHHHHHHHHcC
Q psy13271         10 YPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG--QRALYQIGMT-GIPVFNVN-NNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~--~~~a~~lg~~-~~~~~~i~-~~C~sg~~al~~A~~~i~sG   85 (110)
                      ..+++.+|++++|+++|++|+|||.+|+++++++..++  ..+.+.+|++ ++..++++ .||++++.+|..|.++++++
T Consensus       148 a~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~  227 (478)
T PLN02932        148 TEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVH  227 (478)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcC
Confidence            56799999999999999999999999999988764332  4577899996 78899998 89999999999999999999


Q ss_pred             -CCeEEEEeeccCCCCCCCCCCC
Q psy13271         86 -SDCTLALGFEKMEKGSLGAKSK  107 (110)
Q Consensus        86 -~~~vlv~g~e~~s~~~~~~~~~  107 (110)
                       ..++||+++|.+|......+++
T Consensus       228 ~~~~aLVVstE~~S~~~~~~d~r  250 (478)
T PLN02932        228 RNTYALVVSTENITQNLYLGNNK  250 (478)
T ss_pred             CCCeEEEEEEeecccccCCCcch
Confidence             9999999999999887665543

>PRK04262 hypothetical protein; Provisional

Probab=99.65  E-value=1.2e-15  Score=109.71  Aligned_cols=92  Identities=25%  Similarity=0.335  Sum_probs=81.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCC-CCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTG-IPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~-~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      ++++..+|+.+|++++|+++|++++|||.+++++.++++..+   ..+++.+|+++ .++++++++|+++..+|..|..+
T Consensus        47 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~~~C~~~~~aL~~A~~~  126 (347)
T PRK04262         47 PDEDTATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLEFACKAGTAALQAAMGL  126 (347)
T ss_pred             CCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999998877664322   34678899974 68899999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccC
Q psy13271         82 IESG-SDCTLALGFEKM   97 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~   97 (110)
                      |++| ++++||+++|..
T Consensus       127 i~sg~~~~aLVv~~e~~  143 (347)
T PRK04262        127 VKSGMIKYALAIGADTA  143 (347)
T ss_pred             HHcCCCCEEEEEEEeee
Confidence            9999 999999999973

>PRK12404 stage V sporulation protein AD; Provisional

Probab=99.65  E-value=1.3e-15  Score=107.59  Aligned_cols=89  Identities=22%  Similarity=0.285  Sum_probs=77.9

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHHcC-
Q psy13271          7 DTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIESG-   85 (110)
Q Consensus         7 ~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-   85 (110)
                      +....+|+.+|+++||+++|++++|||.++.++...+...+..+++.||+   |.+.+.++|+++..+|..|+.+|++| 
T Consensus        51 EkAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ipssfvar~LGI---P~~gV~gACSTg~eAL~lAa~~VaSG~  127 (334)
T PRK12404         51 EKAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPTSFAARTLGI---PYLGLFGACSTSMEGLALAALIVNSGG  127 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcHHHHHHHhCC---CccceeecCHHHHHHHHHHHHHHHcCC
Confidence            45666899999999999999999999999999887555556678888984   67999999999999999999999999 


Q ss_pred             CCeEEEEeeccCC
Q psy13271         86 SDCTLALGFEKME   98 (110)
Q Consensus        86 ~~~vlv~g~e~~s   98 (110)
                      +|+||++.+..+.
T Consensus       128 Ad~VLavtsSH~~  140 (334)
T PRK12404        128 AKYVLTGASSHNA  140 (334)
T ss_pred             CCEEEEEeCcccc
Confidence            9999999865544

>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

Probab=99.64  E-value=2.9e-15  Score=102.67  Aligned_cols=89  Identities=35%  Similarity=0.518  Sum_probs=79.6

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc---hhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHHc
Q psy13271          8 TDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC---GQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus         8 ~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~---~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~s   84 (110)
                      .+..+|+.+|++++|+++|++++|||.+++++..++...   ...++..+|++..+.++++++|+++..+|+.|.++|++
T Consensus         5 ~~~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~~~~~~~i~~~C~s~~~al~~A~~~i~~   84 (254)
T cd00327           5 ITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGPAYSVNQACATGLTALALAVQQVQN   84 (254)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCCCCCcceeccHhHHHHHHHHHHHHHHHC
Confidence            347899999999999999999999999999998776532   34678889996569999999999999999999999999


Q ss_pred             C-CCeEEEEeecc
Q psy13271         85 G-SDCTLALGFEK   96 (110)
Q Consensus        85 G-~~~vlv~g~e~   96 (110)
                      | ++++||+++|.
T Consensus        85 g~~~~~lv~~~e~   97 (254)
T cd00327          85 GKADIVLAGGSEE   97 (254)
T ss_pred             CCCCEEEEEecce
Confidence            9 99999999986

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.

>PRK06690 acetyl-CoA acetyltransferase; Provisional

Probab=99.64  E-value=3e-15  Score=108.27  Aligned_cols=99  Identities=23%  Similarity=0.399  Sum_probs=83.6

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchh-HHHHHcCCC-CCCeeeEeccchHHHHHH
Q psy13271          1 FQKPK---EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQ-RALYQIGMT-GIPVFNVNNNCSTGSSAL   75 (110)
Q Consensus         1 f~~~~---~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~-~~a~~lg~~-~~~~~~i~~~C~sg~~al   75 (110)
                      ||++.   ++.++.+|+..+++++++  |++ ++||.+++|+..+...... .++..+|+. ++|+++++++|+||..++
T Consensus        13 fg~~~g~~~~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~~~~~~r~~~~~~Gl~~~~p~~tV~~~CaSG~~Ai   89 (361)
T PRK06690         13 IGKKNGMLKDYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGPGGNVARLSALEAGLGLHIPGVTIDRQCGAGLEAI   89 (361)
T ss_pred             ccCCCCccCCCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCCcchHHHHHHHHcCCCCCCCceehhhhhhHHHHHH
Confidence            55543   457889999999999855  896 8999999998765433333 356788997 799999999999999999


Q ss_pred             HHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         76 MLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        76 ~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      ..|++.|++| +|.+|++|+|.||+.|+
T Consensus        90 ~~a~~~I~sG~~d~~l~gG~E~ms~~p~  117 (361)
T PRK06690         90 RTACHFIQGGAGKCYIAGGVESTSTSPF  117 (361)
T ss_pred             HHHHHHHHCCCCCEEEEeccccccCCCc
Confidence            9999999999 99999999999998875

>PRK06840 hypothetical protein; Validated

Probab=99.63  E-value=5e-15  Score=105.94  Aligned_cols=95  Identities=19%  Similarity=0.174  Sum_probs=82.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEee-cCCCcc---hhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYV-YGDSTC---GQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~-~~~~~~---~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      ++++..+|+.+|++++|+++|+++++||.++++++ .+++..   ...+++.+|+++.++++++++|+++..+|..|.++
T Consensus        49 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~~~~~~~v~~~C~~~~~al~~A~~~  128 (339)
T PRK06840         49 PEDHTSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAKNAWAFDIMAVCASFPIALKVAKDL  128 (339)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCCCcccccccccchHHHHHHHHHHHH
Confidence            46889999999999999999999999999987643 444432   34678899998788999999999999999999999


Q ss_pred             HHc-C-CCeEEEEeeccCCCC
Q psy13271         82 IES-G-SDCTLALGFEKMEKG  100 (110)
Q Consensus        82 i~s-G-~~~vlv~g~e~~s~~  100 (110)
                      |++ | ++++||+++|..++.
T Consensus       129 l~~~g~~~~~Lvv~~~~~s~~  149 (339)
T PRK06840        129 LYSDPSIENVLLVGGYRNSDL  149 (339)
T ss_pred             HhcCCCccEEEEEeecccccc
Confidence            999 8 999999999987763

>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.62  E-value=5.6e-15  Score=107.02  Aligned_cols=91  Identities=19%  Similarity=0.184  Sum_probs=79.4

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHHcC
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG   85 (110)
                      +..+|+.+|++++|+++|+++++||.+++++..++...+   ..++..+|++ .++++++.+|++++.+|..|.++|++|
T Consensus        94 ~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~-~~~~~v~~aCasg~~al~~A~~~i~~g  172 (372)
T PRK07515         94 IQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE-GFAFDMNVACSSATFGIQTAANAIRSG  172 (372)
T ss_pred             hHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC-CcEEEecchhHHHHHHHHHHHHHHHcC
Confidence            346899999999999999999999999998876554433   3467889997 489999999999999999999999999


Q ss_pred             -CCeEEEEeeccCCCC
Q psy13271         86 -SDCTLALGFEKMEKG  100 (110)
Q Consensus        86 -~~~vlv~g~e~~s~~  100 (110)
                       ++++||+++|.++..
T Consensus       173 ~~~~vLvv~~e~~s~~  188 (372)
T PRK07515        173 SARRVLVVNPEICSGH  188 (372)
T ss_pred             CCCEEEEEeeeccccc
Confidence             999999999998754

>PRK08142 acetyl-CoA acetyltransferase; Provisional

Probab=99.61  E-value=6.1e-15  Score=107.54  Aligned_cols=97  Identities=21%  Similarity=0.142  Sum_probs=81.2

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHH
Q psy13271          1 FQKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQ   80 (110)
Q Consensus         1 f~~~~~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~   80 (110)
                      |+|+ ++.++.+|+.+|+++||+|+||+++|||+++..+..+. ..+..+++.+|+++.+...++++|+++..++..|+.
T Consensus        17 ~~~~-~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~-~~~~~~~~~lGl~~~~~~~v~~gg~s~~~a~~~A~~   94 (388)
T PRK08142         17 TRKA-PDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDAPG-LGPASMVDYLGLKLRHVDSTETGGSSYLAHVGHAAQ   94 (388)
T ss_pred             ceeC-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCC-ccHHHHHHhCCCCCeeeccccCCcHHHHHHHHHHHH
Confidence            6665 68899999999999999999999999999775321111 112357889999877888899999999999999999


Q ss_pred             HHHcC-CCeEEEEeeccCCC
Q psy13271         81 FIESG-SDCTLALGFEKMEK   99 (110)
Q Consensus        81 ~i~sG-~~~vlv~g~e~~s~   99 (110)
                      .|++| +|+|||+++|+++.
T Consensus        95 ~I~sG~~d~vLvvg~e~~~~  114 (388)
T PRK08142         95 AIAAGKCSVALITLAGRPRS  114 (388)
T ss_pred             HHHcCCCCEEEEEeeeeccc
Confidence            99999 99999999998653

>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs

Probab=99.61  E-value=3.4e-15  Score=107.67  Aligned_cols=91  Identities=27%  Similarity=0.409  Sum_probs=80.8

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc--hhHHHHHcCCC-CCCeeeEe-ccchHHHHHHHHHHHHHHc
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC--GQRALYQIGMT-GIPVFNVN-NNCSTGSSALMLAKQFIES   84 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~--~~~~a~~lg~~-~~~~~~i~-~~C~sg~~al~~A~~~i~s   84 (110)
                      +..+|+.+|++++|+++|+++++||.+|++++++...+  ...+++.+|++ ++++++++ ++|++++.+|.+|..++++
T Consensus        84 ~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~~~  163 (361)
T cd00831          84 EARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLEA  163 (361)
T ss_pred             HHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999887653322  24678899997 48899998 8999999999999999999


Q ss_pred             C-CCeEEEEeeccCCC
Q psy13271         85 G-SDCTLALGFEKMEK   99 (110)
Q Consensus        85 G-~~~vlv~g~e~~s~   99 (110)
                      | .+++||+++|..+.
T Consensus       164 ~~~~~aLvv~~e~~s~  179 (361)
T cd00831         164 NPGARVLVVSTELCSL  179 (361)
T ss_pred             CCCCEEEEEEeecccc
Confidence            9 99999999999876

PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.

>PLN02377 3-ketoacyl-CoA synthase

Probab=99.61  E-value=9.5e-15  Score=109.11  Aligned_cols=98  Identities=14%  Similarity=0.170  Sum_probs=83.4

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCC-CCCeeeEe-ccchHHHHHHHHHHHHHH
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMT-GIPVFNVN-NNCSTGSSALMLAKQFIE   83 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~-~~~~~~i~-~~C~sg~~al~~A~~~i~   83 (110)
                      ...+++..|++++|+++|++|+|||.+|+ ++++.+..|   ..+++.+|++ ++.+++++ .||++++.+|..|.++++
T Consensus       171 ea~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~  249 (502)
T PLN02377        171 EAEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQ  249 (502)
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHHH
Confidence            35568999999999999999999999987 566654333   4677899997 78899999 799999999999999999


Q ss_pred             cC-CCeEEEEeeccCCCCCCCCCCC
Q psy13271         84 SG-SDCTLALGFEKMEKGSLGAKSK  107 (110)
Q Consensus        84 sG-~~~vlv~g~e~~s~~~~~~~~~  107 (110)
                      ++ ..++||+++|.+|......+++
T Consensus       250 ~~~~~~aLVVstE~~S~~~~~~d~~  274 (502)
T PLN02377        250 VHRNTYAVVVSTENITQNWYFGNKK  274 (502)
T ss_pred             cCCCCEEEEEEEeccccccCCCCCc
Confidence            99 9999999999998776555443

>PLN02577 hydroxymethylglutaryl-CoA synthase

Probab=99.60  E-value=7e-15  Score=108.92  Aligned_cols=96  Identities=17%  Similarity=0.163  Sum_probs=83.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchh---HH---HHHcCCCCCCeeeEeccchHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQ---RA---LYQIGMTGIPVFNVNNNCSTGSSALMLAK   79 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~---~~---a~~lg~~~~~~~~i~~~C~sg~~al~~A~   79 (110)
                      ++++..+|+++|++++|+++|+++++||.|++++.+++...+.   .+   ...||.+++.+++++.+|.+++.||..|.
T Consensus        49 ~~Ed~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~~~~afDi~~AC~G~~~AL~~A~  128 (459)
T PLN02577         49 DVEDVISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNTDIEGVDSTNACYGGTAALLNCV  128 (459)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCCCcEEeehhhhhHHHHHHHHHHH
Confidence            5789999999999999999999999999999999888654432   23   35678888899999999999999999999


Q ss_pred             HHHHcC-C--CeEEEEeeccCCCCC
Q psy13271         80 QFIESG-S--DCTLALGFEKMEKGS  101 (110)
Q Consensus        80 ~~i~sG-~--~~vlv~g~e~~s~~~  101 (110)
                      ++|++| .  +++||+++|..+..+
T Consensus       129 ~~i~sg~~~~~~aLVV~aD~a~~~~  153 (459)
T PLN02577        129 NWVESSSWDGRYGLVVAADSAVYAE  153 (459)
T ss_pred             HHHHcCCCCCCeEEEEEechhhccC
Confidence            999999 7  999999999966443

>PLN03171 chalcone synthase-like protein; Provisional

Probab=99.60  E-value=8.4e-15  Score=107.18  Aligned_cols=94  Identities=26%  Similarity=0.242  Sum_probs=81.2

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch--hHHHHHcCCCCCC--eeeEeccchHHHHHHHHHHHHHH
Q psy13271          8 TDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG--QRALYQIGMTGIP--VFNVNNNCSTGSSALMLAKQFIE   83 (110)
Q Consensus         8 ~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~--~~~a~~lg~~~~~--~~~i~~~C~sg~~al~~A~~~i~   83 (110)
                      ++..+|+.+|++++|+++|++++|||.||++++++++.++  ..+++.||++...  .+.+.++|+++..+|..|.++|+
T Consensus       106 ~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li~  185 (399)
T PLN03171        106 DAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLAE  185 (399)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccCCccHHHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999998876432  2467889997532  56677899999999999999999


Q ss_pred             cC-CCeEEEEeeccCCCCC
Q psy13271         84 SG-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        84 sG-~~~vlv~g~e~~s~~~  101 (110)
                      +| .++|||+++|..|...
T Consensus       186 ~~~~~~vLVv~~e~~s~~~  204 (399)
T PLN03171        186 NNRGARVLVVAAEITLLLF  204 (399)
T ss_pred             hCCCCeEEEEEEecccccc
Confidence            99 9999999999987664

>PLN03169 chalcone synthase family protein; Provisional

Probab=99.58  E-value=8.5e-15  Score=106.90  Aligned_cols=92  Identities=17%  Similarity=0.173  Sum_probs=79.5

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCCC--CeeeEeccchHHHHHHHHHHHH
Q psy13271          7 DTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTGI--PVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         7 ~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~~--~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      +++..+|+.+|++++|+++|++++|||.||+++++ ++..|   ..+++.||+++.  .+++++.+|+++..+|.+|..+
T Consensus       103 ~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A~~~  181 (391)
T PLN03169        103 NEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSS-EARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKDI  181 (391)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcC-CCCCCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHHHHH
Confidence            34667899999999999999999999999998874 54444   357889999753  3689999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCC
Q psy13271         82 IESG-SDCTLALGFEKMEK   99 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~   99 (110)
                      +++| .++|||+++|..+.
T Consensus       182 ~~~~~~~~vLvv~~e~~s~  200 (391)
T PLN03169        182 AENNPGSRVLLTTSETTIL  200 (391)
T ss_pred             HHhCCCCeEEEEEEEcChh
Confidence            9999 99999999999654

>PLN03170 chalcone synthase; Provisional

Probab=99.58  E-value=1.1e-14  Score=106.65  Aligned_cols=92  Identities=20%  Similarity=0.232  Sum_probs=79.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch--hHHHHHcCCCCCC--eeeEeccchHHHHHHHHHHHHHHcC
Q psy13271         10 YPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG--QRALYQIGMTGIP--VFNVNNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~--~~~a~~lg~~~~~--~~~i~~~C~sg~~al~~A~~~i~sG   85 (110)
                      ..+|+.+|+++||+++|++++|||.||++++++...++  ..+++.||+++..  +++++.+|+++..+|..|.++++++
T Consensus       106 a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~~  185 (401)
T PLN03170        106 VPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENN  185 (401)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHHcC
Confidence            34699999999999999999999999998887633322  4678899997643  7899999999999999999999999


Q ss_pred             -CCeEEEEeeccCCCCC
Q psy13271         86 -SDCTLALGFEKMEKGS  101 (110)
Q Consensus        86 -~~~vlv~g~e~~s~~~  101 (110)
                       .++|||+++|..|...
T Consensus       186 ~~~~vLVV~~E~~S~~~  202 (401)
T PLN03170        186 RGARVLVVCSEITAVTF  202 (401)
T ss_pred             CCCeEEEEEEehhhhcc
Confidence             9999999999987544

>PLN03172 chalcone synthase family protein; Provisional

Probab=99.56  E-value=4.4e-14  Score=103.21  Aligned_cols=90  Identities=22%  Similarity=0.277  Sum_probs=77.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch--hHHHHHcCCCCC-C-eeeEeccchHHHHHHHHHHHHHHcC
Q psy13271         10 YPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG--QRALYQIGMTGI-P-VFNVNNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~--~~~a~~lg~~~~-~-~~~i~~~C~sg~~al~~A~~~i~sG   85 (110)
                      ..+|+.+|+++||+++|++++|||.||++++++...++  ..+++.||+++. . .+.++.+|+++..+|..|.++++++
T Consensus       102 a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~  181 (393)
T PLN03172        102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENN  181 (393)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHHcC
Confidence            34799999999999999999999999998887644332  357789999753 2 4678999999999999999999999


Q ss_pred             -CCeEEEEeeccCCC
Q psy13271         86 -SDCTLALGFEKMEK   99 (110)
Q Consensus        86 -~~~vlv~g~e~~s~   99 (110)
                       .++|||+++|..|.
T Consensus       182 ~~~~vLVV~~E~~S~  196 (393)
T PLN03172        182 AGSRVLVVCSEITAV  196 (393)
T ss_pred             CCCeEEEEEEehhhh
Confidence             99999999999884

>PLN03173 chalcone synthase; Provisional

Probab=99.56  E-value=4.2e-14  Score=103.29  Aligned_cols=90  Identities=22%  Similarity=0.279  Sum_probs=77.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch--hHHHHHcCCCCC--CeeeEeccchHHHHHHHHHHHHHHcC
Q psy13271         10 YPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG--QRALYQIGMTGI--PVFNVNNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~--~~~a~~lg~~~~--~~~~i~~~C~sg~~al~~A~~~i~sG   85 (110)
                      ..+|+.+|+++||+++|++++|||.||++++++...++  ..+++.||+++.  ..+.++.+|+++..+|..|.++++++
T Consensus       102 a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~  181 (391)
T PLN03173        102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAENN  181 (391)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHHhC
Confidence            34799999999999999999999999998887644332  357789999753  35678999999999999999999999


Q ss_pred             -CCeEEEEeeccCCC
Q psy13271         86 -SDCTLALGFEKMEK   99 (110)
Q Consensus        86 -~~~vlv~g~e~~s~   99 (110)
                       .++|||+++|.+|.
T Consensus       182 ~~~~vLVV~~E~~S~  196 (391)
T PLN03173        182 KGARVLVVCSEITAV  196 (391)
T ss_pred             CCCeEEEEEEehhhh
Confidence             99999999999884

>PRK07855 lipid-transfer protein; Provisional

Probab=99.55  E-value=7.1e-14  Score=101.93  Aligned_cols=91  Identities=20%  Similarity=0.224  Sum_probs=77.3

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC-CCeeeEeccchHHHHHHHHHH
Q psy13271          1 FQKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG-IPVFNVNNNCSTGSSALMLAK   79 (110)
Q Consensus         1 f~~~~~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~-~~~~~i~~~C~sg~~al~~A~   79 (110)
                      |+|+ ++.++.+|+.+|+++||+|+||+++|||.+++.+.  .......+++.+|+.+ .+...++++|+++..++..|+
T Consensus        16 ~~r~-~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~--~~~~~~~l~~~lGl~~~~~~~~v~~gg~sg~~~~~~A~   92 (386)
T PRK07855         16 FSKN-SGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTM--DTNPEIAVARALGIGELKFFSRIHYGGGAACATVQQAA   92 (386)
T ss_pred             cccC-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC--ccccHHHHHHHCCCCCCcceeeecCCcHHHHHHHHHHH
Confidence            5665 57899999999999999999999999999987432  1222345778899976 566789999999999999999


Q ss_pred             HHHHcC-CCeEEEEee
Q psy13271         80 QFIESG-SDCTLALGF   94 (110)
Q Consensus        80 ~~i~sG-~~~vlv~g~   94 (110)
                      ..|++| +|+|||++.
T Consensus        93 ~~I~sG~~d~vLv~g~  108 (386)
T PRK07855         93 MAVATGVADVVVCYRA  108 (386)
T ss_pred             HHHHCCCCCEEEEEee
Confidence            999999 999999998

>PLN02192 3-ketoacyl-CoA synthase

Probab=99.55  E-value=6.2e-14  Score=104.82  Aligned_cols=96  Identities=13%  Similarity=0.154  Sum_probs=79.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCC-CCCeeeEe-ccchHHHHHHHHHHHHHHc
Q psy13271         10 YPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMT-GIPVFNVN-NNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~-~~~~~~i~-~~C~sg~~al~~A~~~i~s   84 (110)
                      ...+...|++++|+++|++|+|||.+|++++ ++...|   ..+.+.+|++ ++.+++++ .||++++.+|..|.+++++
T Consensus       176 a~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S-~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a  254 (511)
T PLN02192        176 AETVMFGAIDQLLAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQV  254 (511)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEECC-CCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHc
Confidence            3458899999999999999999999988754 443333   3577889997 78999998 7999999999999999999


Q ss_pred             C-CCeEEEEeeccCCCCCCCCCC
Q psy13271         85 G-SDCTLALGFEKMEKGSLGAKS  106 (110)
Q Consensus        85 G-~~~vlv~g~e~~s~~~~~~~~  106 (110)
                      + ..++||+++|.+|...+..++
T Consensus       255 ~~~~~aLVVstE~~S~n~y~g~d  277 (511)
T PLN02192        255 HPNSYALVISMENITLNWYFGND  277 (511)
T ss_pred             CCCCeEEEEEEEeccccCCCCCC
Confidence            9 999999999998844333333

>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

Probab=99.55  E-value=5.3e-14  Score=99.81  Aligned_cols=90  Identities=28%  Similarity=0.378  Sum_probs=77.9

Q ss_pred             HHHHHHHHHHHHHHHcCCC----ccccCeEEEEeecCCCc---------------------c---hhHHHHHcCCCCCCe
Q psy13271         10 YPELAKEALIKALDDAGIS----INQVQQACCGYVYGDST---------------------C---GQRALYQIGMTGIPV   61 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~----~~~id~vi~~~~~~~~~---------------------~---~~~~a~~lg~~~~~~   61 (110)
                      ..+|+.+|++++|+++|++    +++||+|++++..+.+.                     .   +..++..+|++ .++
T Consensus        11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-g~~   89 (332)
T cd00825          11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIH-GPA   89 (332)
T ss_pred             HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCC-CCc
Confidence            5789999999999999999    89999999988765432                     1   24577889995 489


Q ss_pred             eeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCCCC
Q psy13271         62 FNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKG  100 (110)
Q Consensus        62 ~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s~~  100 (110)
                      ++++.+|++++.+|+.|.++|++| ++++||+++|.++..
T Consensus        90 ~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~  129 (332)
T cd00825          90 YDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAP  129 (332)
T ss_pred             cccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCH
Confidence            999999999999999999999999 999999999987543

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).

>KOG1406|consensus

Probab=99.53  E-value=2.1e-14  Score=99.25  Aligned_cols=97  Identities=75%  Similarity=1.229  Sum_probs=90.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHHcC
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG   85 (110)
                      .+.+..+|+.+|...+|+|+++.-++|+.-++|-.+++...+++....+|++++|.+.+++.|++|..+|-.|.+.|++|
T Consensus        25 ~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdstcgqraiyevgmtgipi~nvnnncatgssalflakqiiesg  104 (408)
T KOG1406|consen   25 ADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDSTCGQRAIYEVGMTGIPIYNVNNNCATGSSALFLAKQIIESG  104 (408)
T ss_pred             cCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCCccchHHHHhccccCcceeeccCccccCchHHHHHHHHHhcC
Confidence            57788999999999999999999999998888888888888888888999999999999999999999999999999999


Q ss_pred             -CCeEEEEeeccCCCCCC
Q psy13271         86 -SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        86 -~~~vlv~g~e~~s~~~~  102 (110)
                       .|+||+.|.|+|++...
T Consensus       105 n~dcvlalgfekm~~gsl  122 (408)
T KOG1406|consen  105 NSDCVLALGFEKMERGSL  122 (408)
T ss_pred             CcceEEeechhhhCCccc
Confidence             99999999999987654

>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade

Probab=99.53  E-value=1.3e-13  Score=100.27  Aligned_cols=90  Identities=18%  Similarity=0.199  Sum_probs=79.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc---hhHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC---GQRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~---~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      ++++..+|+.+|++++|+++  ++++||.+++++.++....   ...+++.||+. .++++++.++|++++.||..|.++
T Consensus        45 ~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~~aC~gg~~aL~~A~~~  122 (379)
T TIGR01835        45 IDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFELKQACYGATAALQMAKGH  122 (379)
T ss_pred             CCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHHH
Confidence            56788999999999999998  8999999999988776532   24577889996 478999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccC
Q psy13271         82 IESG-SDCTLALGFEKM   97 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~   97 (110)
                      |++| .+++||+++|..
T Consensus       123 i~s~~~~~aLVv~~D~a  139 (379)
T TIGR01835       123 VALSPDRKVLVIASDIA  139 (379)
T ss_pred             HHcCCCCeEEEEEeehh
Confidence            9999 999999999974

This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.

>PRK06066 acetyl-CoA acetyltransferase; Provisional

Probab=99.52  E-value=2.5e-13  Score=99.06  Aligned_cols=96  Identities=24%  Similarity=0.250  Sum_probs=76.6

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHcC-CCc-cccCeEEEEeec-CC-C-cchhHHHHHcCCCCCCeeeEeccchHHHHHH
Q psy13271          1 FQKPKEDTDYPELAKEALIKALDDAG-ISI-NQVQQACCGYVY-GD-S-TCGQRALYQIGMTGIPVFNVNNNCSTGSSAL   75 (110)
Q Consensus         1 f~~~~~~~~~~~l~~~a~~~al~~ag-l~~-~~id~vi~~~~~-~~-~-~~~~~~a~~lg~~~~~~~~i~~~C~sg~~al   75 (110)
                      |++..++.+..+|+.+|+++||+|+| +++ +|||++++++.. .+ . .....+++.+|+.+.|.+.+   |+++..++
T Consensus        16 ~~~~~~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~v---~~sg~~a~   92 (385)
T PRK06066         16 FRPTTPEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGAMRPTMTV---AGDGLQGL   92 (385)
T ss_pred             CcCCCCCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccCCCCeEEE---eCcHHHHH
Confidence            56533578999999999999999999 997 799999875421 11 1 11234567899866677776   88999999


Q ss_pred             HHHHHHHHcC-CCeEEEEeeccCCC
Q psy13271         76 MLAKQFIESG-SDCTLALGFEKMEK   99 (110)
Q Consensus        76 ~~A~~~i~sG-~~~vlv~g~e~~s~   99 (110)
                      ..|+..|++| +|+|||++.|++++
T Consensus        93 ~~A~~aV~sG~~d~vLv~g~~~~~~  117 (385)
T PRK06066         93 AHAVMHINSGLANVVVVEAHSKPSD  117 (385)
T ss_pred             HHHHHHHHcCCCCEEEEEEEeeccC
Confidence            9999999999 99999999998765

>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade

Probab=99.52  E-value=1.6e-13  Score=101.62  Aligned_cols=91  Identities=21%  Similarity=0.231  Sum_probs=80.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchh---HHHH---HcCCCCCCeeeEeccchHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQ---RALY---QIGMTGIPVFNVNNNCSTGSSALMLAK   79 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~---~~a~---~lg~~~~~~~~i~~~C~sg~~al~~A~   79 (110)
                      ++++..+|+.+|++++|+++++++++||.|++++.+++...+.   .++.   .+|.+++.++++.++|.+++.||..|.
T Consensus        46 ~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~~~~~fDi~~AC~G~t~AL~~A~  125 (454)
T TIGR01833        46 DREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAI  125 (454)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCCCceEEeccccchhHHHHHHHHH
Confidence            5789999999999999999999999999999999887765442   3444   456777889999999999999999999


Q ss_pred             HHHHcC-C--CeEEEEeecc
Q psy13271         80 QFIESG-S--DCTLALGFEK   96 (110)
Q Consensus        80 ~~i~sG-~--~~vlv~g~e~   96 (110)
                      ++|++| .  +++||+++|.
T Consensus       126 ~~i~s~~~~~~~aLVV~sDi  145 (454)
T TIGR01833       126 NWIESSSWDGRYALVVAGDI  145 (454)
T ss_pred             HHHHcCCcCCCeEEEEEecc
Confidence            999999 6  9999999998

Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.

>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]

Probab=99.51  E-value=1.1e-13  Score=101.19  Aligned_cols=102  Identities=39%  Similarity=0.555  Sum_probs=77.8

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHcC-------CCccccCeEEEEeecCCCc----chhHHHHHcCCCC-CCeeeEeccc
Q psy13271          1 FQKPKEDTDYPELAKEALIKALDDAG-------ISINQVQQACCGYVYGDST----CGQRALYQIGMTG-IPVFNVNNNC   68 (110)
Q Consensus         1 f~~~~~~~~~~~l~~~a~~~al~~ag-------l~~~~id~vi~~~~~~~~~----~~~~~a~~lg~~~-~~~~~i~~~C   68 (110)
                      ||++. +.+..++..++..+++.+++       +++.+||.++.|+..+...    .+..++..+|+.. +|.++++.+|
T Consensus        14 ~g~~~-~~s~~~l~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~~~c   92 (392)
T COG0183          14 FGKFG-DGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVNRAC   92 (392)
T ss_pred             cccCC-CCchhhcCHHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEeccc
Confidence            56663 45555666555555555555       4555677888886654432    2235667889974 8999999999


Q ss_pred             hHHHHHHHHHHHHHHcC-CCeEEEEeeccCCCCCCC
Q psy13271         69 STGSSALMLAKQFIESG-SDCTLALGFEKMEKGSLG  103 (110)
Q Consensus        69 ~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s~~~~~  103 (110)
                      +||+.++..|+..|++| +|.+|++|+|+||+.++.
T Consensus        93 ~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~~  128 (392)
T COG0183          93 ASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPMG  128 (392)
T ss_pred             hhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCCcc
Confidence            99999999999999999 999999999999999973

>PLN02854 3-ketoacyl-CoA synthase

Probab=99.50  E-value=2.3e-13  Score=101.99  Aligned_cols=95  Identities=12%  Similarity=0.165  Sum_probs=78.2

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCC-CCCeeeEe-ccchHHHHHHHHHHHHHHcC-
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMT-GIPVFNVN-NNCSTGSSALMLAKQFIESG-   85 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~-~~~~~~i~-~~C~sg~~al~~A~~~i~sG-   85 (110)
                      .....++.++|+++|++|+|||.+|++ ++++...|   ..+.+.+|++ ++.+++++ .||+++..+|..|.++++++ 
T Consensus       190 ~v~~~~~~~lL~kaGi~p~dID~LIv~-cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~  268 (521)
T PLN02854        190 AVMFGALDSLFSKTGVKPRDIGILIVN-CSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKANP  268 (521)
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHhCC
Confidence            466778889999999999999999985 44554333   4577899997 78899998 89999999999999999999 


Q ss_pred             CCeEEEEeeccCCCCCCCCCCC
Q psy13271         86 SDCTLALGFEKMEKGSLGAKSK  107 (110)
Q Consensus        86 ~~~vlv~g~e~~s~~~~~~~~~  107 (110)
                      .+++||+++|.+|...+..+++
T Consensus       269 ~~~aLVVstE~~S~~~y~g~Dr  290 (521)
T PLN02854        269 NSYAVVVSTENITLNWYFGNDR  290 (521)
T ss_pred             CCeEEEEEEeeeecCCCCCCch
Confidence            9999999999988444333333

>PRK08257 acetyl-CoA acetyltransferase; Validated

Probab=99.50  E-value=3.6e-13  Score=100.97  Aligned_cols=93  Identities=15%  Similarity=0.077  Sum_probs=78.4

Q ss_pred             CCHHHHHHHHHHHHHHHcCCC--ccccCeEEEEeecCCC--cchhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHH
Q psy13271          8 TDYPELAKEALIKALDDAGIS--INQVQQACCGYVYGDS--TCGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIE   83 (110)
Q Consensus         8 ~~~~~l~~~a~~~al~~agl~--~~~id~vi~~~~~~~~--~~~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~   83 (110)
                      .++.+|+.+|+++||+|+|++  +++||.+++++.....  ..+..++..+|+.+.+......+|+++..++..|+..|+
T Consensus        25 ~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p~~~~~~~~GG~s~~~~v~~Aa~~Ia  104 (498)
T PRK08257         25 LEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADPARTVYSPVGGNSPQRLVNEAALRIA  104 (498)
T ss_pred             CCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCCcceeEecCCCHHHHHHHHHHHHHHH
Confidence            388999999999999999999  9999999887653221  234567889999766666667888999999999999999


Q ss_pred             cC-CCeEEEEeeccCCCC
Q psy13271         84 SG-SDCTLALGFEKMEKG  100 (110)
Q Consensus        84 sG-~~~vlv~g~e~~s~~  100 (110)
                      +| +|+|||+|+|+++..
T Consensus       105 sG~advVLv~G~E~~~~~  122 (498)
T PRK08257        105 AGEADVALVAGAEAQSTA  122 (498)
T ss_pred             CCCCCEEEEeeeeecccc
Confidence            99 999999999998654

>smart00825 PKS_KS Beta-ketoacyl synthase

Probab=99.46  E-value=3.2e-13  Score=99.03  Aligned_cols=87  Identities=32%  Similarity=0.435  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCc----------------------chhHHHHHcCCCCCCeeeE
Q psy13271         11 PELAKEALIKALDDAGISINQVQ----QACCGYVYGDST----------------------CGQRALYQIGMTGIPVFNV   64 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~~----------------------~~~~~a~~lg~~~~~~~~i   64 (110)
                      ..|+.+|+++||+++|++++++|    +|++++..+++.                      ....++..+|+++ |++++
T Consensus        88 ~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~g-~~~~v  166 (424)
T smart00825       88 QRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRG-PSVTV  166 (424)
T ss_pred             HHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCCC-Ccccc
Confidence            34899999999999999999998    788887643321                      1124667899986 89999


Q ss_pred             eccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCC
Q psy13271         65 NNNCSTGSSALMLAKQFIESG-SDCTLALGFEKME   98 (110)
Q Consensus        65 ~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s   98 (110)
                      +.+|+|+..||..|+++|++| +|++||+++|.+.
T Consensus       167 ~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~  201 (424)
T smart00825      167 DTACSSSLVALHLACQSLRSGECDMALAGGVNLIL  201 (424)
T ss_pred             ccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecC
Confidence            999999999999999999999 9999999999743

The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.

>PLN00415 3-ketoacyl-CoA synthase

Probab=99.43  E-value=1.6e-12  Score=96.26  Aligned_cols=94  Identities=16%  Similarity=0.208  Sum_probs=76.5

Q ss_pred             CCHHHHHHH-HHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCC-CCCeeeEec-cchHHHHHHHHHHHH
Q psy13271          8 TDYPELAKE-ALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMT-GIPVFNVNN-NCSTGSSALMLAKQF   81 (110)
Q Consensus         8 ~~~~~l~~~-a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~-~~~~~~i~~-~C~sg~~al~~A~~~   81 (110)
                      +...+|+.. |++++|+++|++|+|||.+|+. +++....|   ..+.+.+|++ ++..++++. ||+++..+|..|.++
T Consensus       131 ~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs-~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~l  209 (466)
T PLN00415        131 RHESELVIFGALNSLFKKTGIEPREVGIFIVN-CSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNL  209 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CcCCCCCchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHHH
Confidence            444556655 7778899999999999998864 44543223   4577889997 788999986 999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      ++++ ..++||+++|.+|...+
T Consensus       210 l~a~~~~~aLVVs~E~~S~~~~  231 (466)
T PLN00415        210 LKANPNTYAVIVSTENMTLSMY  231 (466)
T ss_pred             HHhCCCCEEEEEEEeccccccc
Confidence            9999 99999999999886543

>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II

Probab=99.42  E-value=1.1e-12  Score=95.61  Aligned_cols=89  Identities=26%  Similarity=0.452  Sum_probs=73.3

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC-----------------------------cchhHHHHHcC
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQ----QACCGYVYGDS-----------------------------TCGQRALYQIG   55 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~-----------------------------~~~~~~a~~lg   55 (110)
                      +..+|+.++++++|+++|++++++|    ++++++..++.                             .....++..+|
T Consensus        70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  149 (406)
T cd00834          70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG  149 (406)
T ss_pred             HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence            4557999999999999999988877    46776654321                             01234667899


Q ss_pred             CCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCC
Q psy13271         56 MTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKME   98 (110)
Q Consensus        56 ~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s   98 (110)
                      +++ +.++++.+|+|++.||+.|+++|++| +|++||+++|.++
T Consensus       150 l~g-~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~  192 (406)
T cd00834         150 LRG-PNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALI  192 (406)
T ss_pred             CCC-cccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCccccc
Confidence            975 89999999999999999999999999 9999999999875

KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.

>KOG1390|consensus

Probab=99.42  E-value=8e-13  Score=93.11  Aligned_cols=99  Identities=29%  Similarity=0.396  Sum_probs=83.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH----HHHHcCCC-CCCeeeEeccchHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQR----ALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQ   80 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~----~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~   80 (110)
                      +..+..+|+..|++.+|+++.++++|++-+|+|+..+.. .++.    .+--.|+. .+++++++..|+||+.|+.+|++
T Consensus        26 ssl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~An-lGQapaRQaalgAGlp~sv~~tTvNkvCaSgmKAv~laaQ  104 (396)
T KOG1390|consen   26 SSLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSAN-LGQAPARQAALGAGLPYSVPATTVNKVCASGMKAVILAAQ  104 (396)
T ss_pred             ccCchhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccc-cCcchHHHHHhhcCCCcceeeEeehhhhhhhHHHHHHHHH
Confidence            678899999999999999999999999999998765322 2232    33345674 57899999999999999999999


Q ss_pred             HHHcC-CCeEEEEeeccCCCCCCCCC
Q psy13271         81 FIESG-SDCTLALGFEKMEKGSLGAK  105 (110)
Q Consensus        81 ~i~sG-~~~vlv~g~e~~s~~~~~~~  105 (110)
                      .|+.| .|.++.+|.|.||..|+...
T Consensus       105 sI~~G~~divVaGGmEsMS~vP~~~~  130 (396)
T KOG1390|consen  105 SIQTGHADIVVAGGMESMSNVPYLYV  130 (396)
T ss_pred             HHhcCCccEEEecccchhccCcchhh
Confidence            99999 99999999999999994433

>KOG1391|consensus

Probab=99.42  E-value=4.4e-13  Score=92.52  Aligned_cols=106  Identities=22%  Similarity=0.323  Sum_probs=92.5

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCC-----CCCeeeEeccchHHHHHH
Q psy13271          1 FQKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMT-----GIPVFNVNNNCSTGSSAL   75 (110)
Q Consensus         1 f~~~~~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~-----~~~~~~i~~~C~sg~~al   75 (110)
                      ||...++.+..+|..-|++.+|+.+++.++.+|.+|+++.......+-++++..|++     ..|..+|+.-|.||.+++
T Consensus        19 fGG~LKg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~pALtiNRLCGSGFQsi   98 (396)
T KOG1391|consen   19 FGGKLKGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKETPALTINRLCGSGFQSI   98 (396)
T ss_pred             ccccccCcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCccCceeehhhhcccHHHH
Confidence            344448899999999999999999999999999999998866555566777776663     368999999999999999


Q ss_pred             HHHHHHHHcC-CCeEEEEeeccCCCCCCCCCC
Q psy13271         76 MLAKQFIESG-SDCTLALGFEKMEKGSLGAKS  106 (110)
Q Consensus        76 ~~A~~~i~sG-~~~vlv~g~e~~s~~~~~~~~  106 (110)
                      ..+++.|.-| ++.+|++|.|.||..||-.++
T Consensus        99 VNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRn  130 (396)
T KOG1391|consen   99 VNGAQEICVGEAEIVLCGGTENMSQAPFCVRN  130 (396)
T ss_pred             HhhHHHhhcCcceEEEecCccccccCcceeee
Confidence            9999999999 999999999999999987664

>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.40  E-value=2.5e-12  Score=94.13  Aligned_cols=89  Identities=25%  Similarity=0.352  Sum_probs=72.8

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC---------------------c--------chhHHHHHcC
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQ----QACCGYVYGDS---------------------T--------CGQRALYQIG   55 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~---------------------~--------~~~~~a~~lg   55 (110)
                      +...|+.+++++||+++|++++++|    ++++++..+..                     .        ....++..+|
T Consensus        71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g  150 (411)
T PRK07314         71 RFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYG  150 (411)
T ss_pred             HHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhC
Confidence            3457899999999999999999888    67777643211                     0        1124667899


Q ss_pred             CCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCC
Q psy13271         56 MTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKME   98 (110)
Q Consensus        56 ~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s   98 (110)
                      +++ |.++++++|+|++.||..|+++|++| +|++||+|+|.+.
T Consensus       151 l~G-p~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~  193 (411)
T PRK07314        151 AKG-PNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAI  193 (411)
T ss_pred             CCC-ccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccC
Confidence            986 89999999999999999999999999 9999999999743

>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases

Probab=99.39  E-value=2.9e-12  Score=93.64  Aligned_cols=89  Identities=30%  Similarity=0.265  Sum_probs=73.0

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccc-cC----eEEEEeecCCC---------------------------cchhHHHHHcCC
Q psy13271          9 DYPELAKEALIKALDDAGISINQ-VQ----QACCGYVYGDS---------------------------TCGQRALYQIGM   56 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~-id----~vi~~~~~~~~---------------------------~~~~~~a~~lg~   56 (110)
                      +...|+.+++++||+++|+++++ ++    ++++++..++.                           .....++..+|+
T Consensus        71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl  150 (407)
T cd00828          71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS  150 (407)
T ss_pred             HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence            45678999999999999998877 55    57777653321                           112346678899


Q ss_pred             -CCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCC
Q psy13271         57 -TGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKME   98 (110)
Q Consensus        57 -~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s   98 (110)
                       ++ |+++++++|+|++.||..|+++|++| +|.+||+|+|.++
T Consensus       151 ~~G-p~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~  193 (407)
T cd00828         151 SHG-PIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL  193 (407)
T ss_pred             CCC-CCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC
Confidence             65 89999999999999999999999999 9999999999875

They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.

>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species

Probab=99.39  E-value=4.8e-12  Score=88.64  Aligned_cols=98  Identities=17%  Similarity=0.263  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc--chhHHHHHcCCC-CCCeeeE-eccchHHHHHHHHHHHHHHcC-
Q psy13271         11 PELAKEALIKALDDAGISINQVQQACCGYVYGDST--CGQRALYQIGMT-GIPVFNV-NNNCSTGSSALMLAKQFIESG-   85 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~--~~~~~a~~lg~~-~~~~~~i-~~~C~sg~~al~~A~~~i~sG-   85 (110)
                      ..++..++.++|+++|++|+|||.+|+.++.....  ....+.+.+|++ ++..+.+ +.||++|+.+|..|.++++.. 
T Consensus        84 e~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~~p  163 (290)
T PF08392_consen   84 EMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHP  163 (290)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHhCC
Confidence            34778899999999999999999999987754332  345678899996 5777877 489999999999999999999 


Q ss_pred             CCeEEEEeeccCCCCCCCCCCCC
Q psy13271         86 SDCTLALGFEKMEKGSLGAKSKP  108 (110)
Q Consensus        86 ~~~vlv~g~e~~s~~~~~~~~~~  108 (110)
                      -.++||+.+|..+...+..++|+
T Consensus       164 ~~~ALVVstE~~s~~~Y~G~~rs  186 (290)
T PF08392_consen  164 NSYALVVSTENISANWYRGNDRS  186 (290)
T ss_pred             CcEEEEEEEeecccccccCCcHH
Confidence            99999999999998888777664

The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane

>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional

Probab=99.39  E-value=3.1e-12  Score=94.20  Aligned_cols=89  Identities=21%  Similarity=0.271  Sum_probs=71.1

Q ss_pred             CCHHHHHHHHHHHHHHHcCCC-ccccC----eEEEEeecCCCc-----------------------------chhHHHHH
Q psy13271          8 TDYPELAKEALIKALDDAGIS-INQVQ----QACCGYVYGDST-----------------------------CGQRALYQ   53 (110)
Q Consensus         8 ~~~~~l~~~a~~~al~~agl~-~~~id----~vi~~~~~~~~~-----------------------------~~~~~a~~   53 (110)
                      .+..+|+..++++||+++|++ +++++    ++++++..+...                             ....++..
T Consensus        75 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~  154 (421)
T PTZ00050         75 SRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIK  154 (421)
T ss_pred             CHHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHH
Confidence            445789999999999999998 67666    455555433210                             01235567


Q ss_pred             cCCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccC
Q psy13271         54 IGMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKM   97 (110)
Q Consensus        54 lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~   97 (110)
                      +|+++ |++++.++|+|++.||.+|+++|++| +|.+|++|+|.+
T Consensus       155 ~~l~G-p~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~  198 (421)
T PTZ00050        155 HKLKG-PSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEAS  198 (421)
T ss_pred             hCCCC-cccccccHhHHHHHHHHHHHHHHHcCCCCEEEECccccc
Confidence            89987 99999999999999999999999999 999999999973

>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II

Probab=99.39  E-value=3.6e-12  Score=93.01  Aligned_cols=87  Identities=26%  Similarity=0.391  Sum_probs=71.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCCc-----------------------------chhHHHHHcCC
Q psy13271         10 YPELAKEALIKALDDAGISINQVQQ----ACCGYVYGDST-----------------------------CGQRALYQIGM   56 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id~----vi~~~~~~~~~-----------------------------~~~~~a~~lg~   56 (110)
                      ..+|+.++++++|+++|++++++|.    +++++..+...                             ....++..+|+
T Consensus        71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl  150 (407)
T TIGR03150        71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA  150 (407)
T ss_pred             HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence            3578999999999999999999885    67665432110                             11236677899


Q ss_pred             CCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccC
Q psy13271         57 TGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKM   97 (110)
Q Consensus        57 ~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~   97 (110)
                      ++ |.++++++|+|++.||..|+++|++| +|++||+|+|.+
T Consensus       151 ~g-~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~  191 (407)
T TIGR03150       151 KG-PNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAA  191 (407)
T ss_pred             CC-cccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCc
Confidence            75 89999999999999999999999999 999999999974

FabB sequences should fall well below the noise cutoff of this model.

>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations

Probab=99.36  E-value=3.4e-12  Score=93.29  Aligned_cols=88  Identities=31%  Similarity=0.384  Sum_probs=73.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCc----------------------chhHHHHHcCCCCCCeee
Q psy13271         10 YPELAKEALIKALDDAGISINQVQ----QACCGYVYGDST----------------------CGQRALYQIGMTGIPVFN   63 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~~----------------------~~~~~a~~lg~~~~~~~~   63 (110)
                      ..+|+.+|++++|+++|+++++++    ++++++..+++.                      ....++..+|+++ |.++
T Consensus        87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~g-~~~~  165 (421)
T cd00833          87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRG-PSLT  165 (421)
T ss_pred             HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCCC-Ccee
Confidence            467999999999999999998877    477776543210                      1234677899976 9999


Q ss_pred             EeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCC
Q psy13271         64 VNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKME   98 (110)
Q Consensus        64 i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s   98 (110)
                      ++++|+|+..||..|+++|++| +|++||+|+|.+.
T Consensus       166 v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~  201 (421)
T cd00833         166 VDTACSSSLVALHLACQSLRSGECDLALVGGVNLIL  201 (421)
T ss_pred             eccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccC
Confidence            9999999999999999999999 9999999999753

PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.

>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.36  E-value=5.7e-12  Score=92.69  Aligned_cols=87  Identities=24%  Similarity=0.319  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCcccc-C----eEEEEeecCCCc-----------------------------chhHHHHHcC
Q psy13271         10 YPELAKEALIKALDDAGISINQV-Q----QACCGYVYGDST-----------------------------CGQRALYQIG   55 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~i-d----~vi~~~~~~~~~-----------------------------~~~~~a~~lg   55 (110)
                      ...|+..+++++|+++|++++++ +    ++++++..+...                             ....++..+|
T Consensus        82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g  161 (424)
T PRK06333         82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG  161 (424)
T ss_pred             HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence            34688999999999999988776 3    677776543210                             0124567789


Q ss_pred             CCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccC
Q psy13271         56 MTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKM   97 (110)
Q Consensus        56 ~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~   97 (110)
                      +++ |+++++++|+|++.||+.|+++|++| +|.+||+|+|.+
T Consensus       162 l~G-p~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~  203 (424)
T PRK06333        162 FKG-PLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAA  203 (424)
T ss_pred             CCC-CCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence            976 99999999999999999999999999 999999999973

>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2

Probab=99.34  E-value=1.9e-11  Score=83.24  Aligned_cols=90  Identities=23%  Similarity=0.328  Sum_probs=71.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch--hHHHHHcCCCC-CCeeeE-eccchHHHHHHHHHHHHHHcC
Q psy13271         10 YPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG--QRALYQIGMTG-IPVFNV-NNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~--~~~a~~lg~~~-~~~~~i-~~~C~sg~~al~~A~~~i~sG   85 (110)
                      ..+|+.+|+++||+++|++++||+.+|+.++++-..++  ..+.+.|||++ +.-+.+ ..||.+|..+|..|..+.++.
T Consensus       100 a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~~~~  179 (226)
T PF00195_consen  100 APPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIARAN  179 (226)
T ss_dssp             HHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHHHHHHHHhCC
Confidence            45699999999999999999999999999988755443  36789999964 444444 589999999999999999999


Q ss_pred             -CCeEEEEeeccCCC
Q psy13271         86 -SDCTLALGFEKMEK   99 (110)
Q Consensus        86 -~~~vlv~g~e~~s~   99 (110)
                       -.+|||+.+|..|-
T Consensus       180 p~a~VLvv~vElcsl  194 (226)
T PF00195_consen  180 PGARVLVVCVELCSL  194 (226)
T ss_dssp             TT-EEEEEEEEEGGG
T ss_pred             ccceEEEEEEEeeEE
Confidence             99999999998763

3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....

>PRK07937 lipid-transfer protein; Provisional

Probab=99.33  E-value=1.7e-11  Score=88.60  Aligned_cols=94  Identities=23%  Similarity=0.278  Sum_probs=70.0

Q ss_pred             CCCCCCCCCH-HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch-----hHHHHHcCC-CCCCeeeEeccchHHHH
Q psy13271          1 FQKPKEDTDY-PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG-----QRALYQIGM-TGIPVFNVNNNCSTGSS   73 (110)
Q Consensus         1 f~~~~~~~~~-~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~-----~~~a~~lg~-~~~~~~~i~~~C~sg~~   73 (110)
                      |+|..++.+. .+|+.+|+++||+|+|++++|||+++.+..  +....     ......+|+ .+.+...++   ++|..
T Consensus        14 ~~~~~~~~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~~--~~~~~~~~~~~~~~~~~G~~~~~~~~~v~---~~g~~   88 (352)
T PRK07937         14 HVRRTDGTTNGVEMLMPCFAELYAELGITKSDIGFWCSGSS--DYLAGRAFSFISAIDSIGAVPPINESHVE---MDAAW   88 (352)
T ss_pred             cccCCCCCCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcc--ccccccccchhhHHhhccCCCCCceEEec---CcHHH
Confidence            5665224555 899999999999999999999998864422  22111     123456777 344565555   36888


Q ss_pred             HHHHHHHHHHcC-CCeEEEEeeccCCC
Q psy13271         74 ALMLAKQFIESG-SDCTLALGFEKMEK   99 (110)
Q Consensus        74 al~~A~~~i~sG-~~~vlv~g~e~~s~   99 (110)
                      ++..|+..|++| +|+|||++.|+++.
T Consensus        89 a~~~A~~aI~sG~~d~VLv~g~~k~~~  115 (352)
T PRK07937         89 ALYEAWVKLLTGEVDTALVYGFGKSSA  115 (352)
T ss_pred             HHHHHHHHHhcCCCCEEEEEEecccCc
Confidence            999999999999 99999999998753

>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.33  E-value=1e-11  Score=91.05  Aligned_cols=86  Identities=24%  Similarity=0.364  Sum_probs=69.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC-----------------------------cchhHHHHHcCC
Q psy13271         10 YPELAKEALIKALDDAGISINQVQ----QACCGYVYGDS-----------------------------TCGQRALYQIGM   56 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~-----------------------------~~~~~~a~~lg~   56 (110)
                      ...|+..++++||+++|+++++++    ++++++..+..                             .....++..+|+
T Consensus        72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl  151 (406)
T PRK08439         72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL  151 (406)
T ss_pred             HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence            457889999999999999988776    46665533211                             011245678999


Q ss_pred             CCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeecc
Q psy13271         57 TGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEK   96 (110)
Q Consensus        57 ~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~   96 (110)
                      ++ |++++.++|+|+..||..|+++|++| +|++|++|+|.
T Consensus       152 ~G-p~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~  191 (406)
T PRK08439        152 KG-PNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAES  191 (406)
T ss_pred             CC-CccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchh
Confidence            87 88999999999999999999999999 99999999996

>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2

Probab=99.32  E-value=2.2e-11  Score=83.68  Aligned_cols=88  Identities=31%  Similarity=0.482  Sum_probs=69.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC-----eEEEEeecCCC-------------------cc--------hhHHHHHcCCC
Q psy13271         10 YPELAKEALIKALDDAGISINQVQ-----QACCGYVYGDS-------------------TC--------GQRALYQIGMT   57 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id-----~vi~~~~~~~~-------------------~~--------~~~~a~~lg~~   57 (110)
                      ...|+..++.+||+++|+++.+++     ++++|+..+++                   ..        ...++..+|++
T Consensus        87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~  166 (254)
T PF00109_consen   87 QSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGLR  166 (254)
T ss_dssp             HHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-
T ss_pred             hhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCCC
Confidence            446899999999999999886543     57777765521                   00        12456779999


Q ss_pred             CCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeec-cCC
Q psy13271         58 GIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFE-KME   98 (110)
Q Consensus        58 ~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e-~~s   98 (110)
                      + |+++++++|+|++.||+.|+++|++| +|.+||+++| .++
T Consensus       167 G-~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~  208 (254)
T PF00109_consen  167 G-PSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLS  208 (254)
T ss_dssp             S-SEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SS
T ss_pred             C-ccccccccccccccccchhcccccccccccccccccccccc
Confidence            7 99999999999999999999999999 9999999999 344

3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....

>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.31  E-value=2.4e-11  Score=89.41  Aligned_cols=87  Identities=26%  Similarity=0.379  Sum_probs=70.4

Q ss_pred             HHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCc-----------------------------chhHHHHHcCCC
Q psy13271         11 PELAKEALIKALDDAGISINQVQ----QACCGYVYGDST-----------------------------CGQRALYQIGMT   57 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~~-----------------------------~~~~~a~~lg~~   57 (110)
                      ..++..++++||+++|+++++.+    ++++|+..+...                             ...+++..+|++
T Consensus        75 ~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~  154 (414)
T PRK08722         75 IQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLR  154 (414)
T ss_pred             HHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCC
Confidence            35788899999999999765544    678877543210                             112456678999


Q ss_pred             CCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCC
Q psy13271         58 GIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKME   98 (110)
Q Consensus        58 ~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s   98 (110)
                      + |+++++++|+|++.||..|+++|++| +|.+||+|+|...
T Consensus       155 G-p~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~  195 (414)
T PRK08722        155 G-PNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKAS  195 (414)
T ss_pred             C-CccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccC
Confidence            7 99999999999999999999999999 9999999999853

>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase

Probab=99.30  E-value=2.6e-11  Score=89.71  Aligned_cols=87  Identities=25%  Similarity=0.267  Sum_probs=70.4

Q ss_pred             CHHHHHHHHHHHHHHHcCCCcc-----ccCeEEEEeecCCCc-----------------------------chhHHHHHc
Q psy13271          9 DYPELAKEALIKALDDAGISIN-----QVQQACCGYVYGDST-----------------------------CGQRALYQI   54 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~-----~id~vi~~~~~~~~~-----------------------------~~~~~a~~l   54 (110)
                      ....|+.+|+++||+++|+++.     +..++++|+..+...                             ....++..+
T Consensus        92 ~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~  171 (437)
T PLN02836         92 RFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRY  171 (437)
T ss_pred             HHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHh
Confidence            3457899999999999998643     345788887543210                             012466788


Q ss_pred             CCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeecc
Q psy13271         55 GMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEK   96 (110)
Q Consensus        55 g~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~   96 (110)
                      |+++ |++++.++|+|+..||..|+++|++| +|.+||+|+|.
T Consensus       172 gl~G-p~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~  213 (437)
T PLN02836        172 GFQG-PNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTES  213 (437)
T ss_pred             CCCC-ceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccc
Confidence            9987 99999999999999999999999999 99999999986

>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=99.28  E-value=3.6e-11  Score=88.37  Aligned_cols=88  Identities=24%  Similarity=0.300  Sum_probs=70.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCc------------------------------chhHHHHHcC
Q psy13271         10 YPELAKEALIKALDDAGISINQVQ----QACCGYVYGDST------------------------------CGQRALYQIG   55 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~~------------------------------~~~~~a~~lg   55 (110)
                      ...++..|+++||+++|+++++++    ++++++..+...                              ....++..+|
T Consensus        71 ~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~  150 (406)
T PRK07967         71 ASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFK  150 (406)
T ss_pred             HHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHC
Confidence            446888999999999999765544    577776432210                              0123567899


Q ss_pred             CCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCC
Q psy13271         56 MTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKME   98 (110)
Q Consensus        56 ~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s   98 (110)
                      +++ |+++++++|+|++.||..|+++|++| +|++|++|+|.++
T Consensus       151 l~G-p~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~  193 (406)
T PRK07967        151 IKG-VNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELD  193 (406)
T ss_pred             CCC-CccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccC
Confidence            987 99999999999999999999999999 9999999998754

>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated

Probab=99.26  E-value=5.2e-11  Score=85.92  Aligned_cols=92  Identities=16%  Similarity=0.183  Sum_probs=74.4

Q ss_pred             CCHHHHHHHHHHHHHHHcC-CCccccCeEEEEee-----cCCCcc---hhHHHHHcCCCC-CCeeeEeccchHHHHHHHH
Q psy13271          8 TDYPELAKEALIKALDDAG-ISINQVQQACCGYV-----YGDSTC---GQRALYQIGMTG-IPVFNVNNNCSTGSSALML   77 (110)
Q Consensus         8 ~~~~~l~~~a~~~al~~ag-l~~~~id~vi~~~~-----~~~~~~---~~~~a~~lg~~~-~~~~~i~~~C~sg~~al~~   77 (110)
                      .+..+|+.+|++++|++++ +++++|+.++..+.     .++...   ...++..+|+.. .+++++.++|+|+..||..
T Consensus        63 ~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~~~casg~~Al~~  142 (348)
T PRK06147         63 ERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIARGRVSGAVALAQ  142 (348)
T ss_pred             HHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCcccccccchHHHHHHHH
Confidence            4677899999999999999 78999998887533     111111   134667788832 4789999999999999999


Q ss_pred             HHHHHHcC-CCeEEEEeeccCCC
Q psy13271         78 AKQFIESG-SDCTLALGFEKMEK   99 (110)
Q Consensus        78 A~~~i~sG-~~~vlv~g~e~~s~   99 (110)
                      |+++|++| +|.+||+|+|.++.
T Consensus       143 A~~~i~~G~~~~~lvgg~d~~~~  165 (348)
T PRK06147        143 ARRLIAAGGCPRVLVAGVDSLLT  165 (348)
T ss_pred             HHHHHHcCCCCEEEEEeeccccC
Confidence            99999999 99999999998765

>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.25  E-value=7.1e-11  Score=86.61  Aligned_cols=86  Identities=29%  Similarity=0.208  Sum_probs=68.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCc----------------------------------------
Q psy13271         10 YPELAKEALIKALDDAGISINQVQ----QACCGYVYGDST----------------------------------------   45 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~~----------------------------------------   45 (110)
                      ...|+..|+++||+++|++..+.+    ++++++..+...                                        
T Consensus        73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n  152 (398)
T PRK06519         73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN  152 (398)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence            456889999999999999654332    567776543210                                        


Q ss_pred             -chhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeecc
Q psy13271         46 -CGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEK   96 (110)
Q Consensus        46 -~~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~   96 (110)
                       ....++..+|+++ |++++.++|+|++.||..|+++|++| +|.+|++|+|.
T Consensus       153 ~~a~~is~~~gl~G-p~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~  204 (398)
T PRK06519        153 LLAGNISIVHKVTG-SSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYN  204 (398)
T ss_pred             HHHHHHHHHhCCCC-ccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeecc
Confidence             0123556789997 99999999999999999999999999 99999999986

>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]

Probab=99.24  E-value=3.4e-11  Score=86.87  Aligned_cols=93  Identities=25%  Similarity=0.323  Sum_probs=80.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc---chhHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDST---CGQRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~---~~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      .+++...|+++|++++|+++++||++|+.|++++-++...   ....++..||+. ...++++..+|-+|+.||+.|..+
T Consensus        47 ~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~~  126 (377)
T COG3425          47 WDEDAVTMAVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIGW  126 (377)
T ss_pred             CchhHHHHHHHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHHHHHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999998755332   234577889995 467788899999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCC
Q psy13271         82 IESG-SDCTLALGFEKME   98 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s   98 (110)
                      |.+| .+++||+++|.-.
T Consensus       127 v~s~~~~~~LvI~sD~a~  144 (377)
T COG3425         127 VESGMISYGLVIGADTAQ  144 (377)
T ss_pred             HHcCCccceEEEeehhhc
Confidence            9999 9999999999743

>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional

Probab=99.20  E-value=1.6e-10  Score=83.32  Aligned_cols=87  Identities=17%  Similarity=0.192  Sum_probs=68.8

Q ss_pred             CHHHHHHHHHHHHHHHcCCC--ccccCeEEEEeecCCCc-----------------------------chhHHHHHcCCC
Q psy13271          9 DYPELAKEALIKALDDAGIS--INQVQQACCGYVYGDST-----------------------------CGQRALYQIGMT   57 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~--~~~id~vi~~~~~~~~~-----------------------------~~~~~a~~lg~~   57 (110)
                      +..+++..|++++|+++|+.  ++++ ++++|+..+...                             ....++..+|++
T Consensus         3 ~~~~~~~~a~~~a~~~a~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~   81 (342)
T PRK14691          3 RWWRYKWITFHPSLTHADNTEKQERT-ATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFK   81 (342)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCcccE-EEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCC
Confidence            35678899999999999975  3332 677776543310                             012355678999


Q ss_pred             CCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccC
Q psy13271         58 GIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKM   97 (110)
Q Consensus        58 ~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~   97 (110)
                      + |++++.++|+|++.||..|+++|++| +|.+|++|+|..
T Consensus        82 G-p~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~  121 (342)
T PRK14691         82 G-PIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAV  121 (342)
T ss_pred             C-CccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc
Confidence            7 99999999999999999999999999 999999999873

>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II

Probab=99.19  E-value=1.5e-10  Score=87.64  Aligned_cols=85  Identities=24%  Similarity=0.345  Sum_probs=68.5

Q ss_pred             HHHHHHHHHHHHHHcCCCcc---ccC----eEEEEeecCCCc----------------------------chhHHHHHcC
Q psy13271         11 PELAKEALIKALDDAGISIN---QVQ----QACCGYVYGDST----------------------------CGQRALYQIG   55 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~---~id----~vi~~~~~~~~~----------------------------~~~~~a~~lg   55 (110)
                      ..++..++++||+++|++++   +++    +|++|+..+...                            ....++..+|
T Consensus       200 ~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~g  279 (540)
T PLN02787        200 MLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLG  279 (540)
T ss_pred             HHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhC
Confidence            45788899999999999764   332    688887653210                            0123556789


Q ss_pred             CCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeecc
Q psy13271         56 MTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEK   96 (110)
Q Consensus        56 ~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~   96 (110)
                      +++ |.++++++|+|+..||..|+++|++| +|.+|++|+|.
T Consensus       280 l~G-p~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~  320 (540)
T PLN02787        280 WMG-PNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDA  320 (540)
T ss_pred             CCC-CccccccccccHHHHHHHHHHHHHcCCCCEEEEecccc
Confidence            987 99999999999999999999999999 99999999996

>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.19  E-value=1.7e-10  Score=84.80  Aligned_cols=88  Identities=25%  Similarity=0.308  Sum_probs=69.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCc-cccC----eEEEEeecCCCc-----------------------------chhHHHHHcC
Q psy13271         10 YPELAKEALIKALDDAGISI-NQVQ----QACCGYVYGDST-----------------------------CGQRALYQIG   55 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~-~~id----~vi~~~~~~~~~-----------------------------~~~~~a~~lg   55 (110)
                      ...|+..++++||+++|++. ..++    ++++|+..+...                             ....++..+|
T Consensus        73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~  152 (405)
T PRK09116         73 VSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFG  152 (405)
T ss_pred             HHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhC
Confidence            34688899999999999843 2222    677876543210                             0123566799


Q ss_pred             CCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCC
Q psy13271         56 MTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKME   98 (110)
Q Consensus        56 ~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s   98 (110)
                      +++ |.+++.++|+|+..||..|+++|++| +|.+|++|+|.++
T Consensus       153 ~~G-p~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~  195 (405)
T PRK09116        153 LKG-RVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELC  195 (405)
T ss_pred             CCC-CcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcC
Confidence            997 99999999999999999999999999 9999999999754

>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated

Probab=99.16  E-value=2.7e-10  Score=83.77  Aligned_cols=86  Identities=22%  Similarity=0.211  Sum_probs=66.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC--eEEEEeecCC----------------Cc------------chhHHHHHcCCCCC
Q psy13271         10 YPELAKEALIKALDDAGISINQVQ--QACCGYVYGD----------------ST------------CGQRALYQIGMTGI   59 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id--~vi~~~~~~~----------------~~------------~~~~~a~~lg~~~~   59 (110)
                      ...|+..+++++|+++|+++.+.+  ++++++....                ..            ....++..+|+++ 
T Consensus        80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~G-  158 (410)
T PRK07103         80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRG-  158 (410)
T ss_pred             HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCCC-
Confidence            456999999999999999643333  4555543211                00            0123557899986 


Q ss_pred             CeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeecc
Q psy13271         60 PVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEK   96 (110)
Q Consensus        60 ~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~   96 (110)
                      |++++.++|+|++.||+.|+++|++| +|.+||+|++.
T Consensus       159 ~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~  196 (410)
T PRK07103        159 EGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALM  196 (410)
T ss_pred             CcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc
Confidence            89999999999999999999999999 99999999863

>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase

Probab=99.14  E-value=3.3e-10  Score=74.21  Aligned_cols=92  Identities=21%  Similarity=0.270  Sum_probs=74.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecC-CC--cchhHHHHHcCCC---CCCeeeEeccchHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYG-DS--TCGQRALYQIGMT---GIPVFNVNNNCSTGSSALMLAK   79 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~-~~--~~~~~~a~~lg~~---~~~~~~i~~~C~sg~~al~~A~   79 (110)
                      +.++...|++.|++.+|++.++++++|+.+++|+=++ |.  .....+.+.||+.   .+..+++.++|-+|+.||..|.
T Consensus        49 ~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a~  128 (174)
T PF01154_consen   49 PDEDIVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNAV  128 (174)
T ss_dssp             TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHHH
Confidence            5789999999999999999999999999999997543 22  2334677889983   3456888999999999999999


Q ss_pred             HHHHcC-CC--eEEEEeeccC
Q psy13271         80 QFIESG-SD--CTLALGFEKM   97 (110)
Q Consensus        80 ~~i~sG-~~--~vlv~g~e~~   97 (110)
                      ++|+++ .+  ++||+++|.-
T Consensus       129 ~~v~s~~~~g~~aLVVasDiA  149 (174)
T PF01154_consen  129 NWVASSPWDGRKALVVASDIA  149 (174)
T ss_dssp             HHHCSTTSTTEEEEEEEEEEE
T ss_pred             HHHhcCCCCCCeEEEEecccc
Confidence            999998 64  9999999964

Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....

>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria

Probab=99.12  E-value=7.3e-10  Score=81.27  Aligned_cols=86  Identities=23%  Similarity=0.248  Sum_probs=69.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCc-----------------------------chhHHHHHcCC
Q psy13271         10 YPELAKEALIKALDDAGISINQVQ----QACCGYVYGDST-----------------------------CGQRALYQIGM   56 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~~-----------------------------~~~~~a~~lg~   56 (110)
                      ...|+..++++||+++|+++++++    +|++++..+...                             ....++..+|+
T Consensus        71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl  150 (399)
T cd00832          71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM  150 (399)
T ss_pred             HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence            356889999999999999877654    677776543220                             01245567899


Q ss_pred             CCCCeeeEeccchHHHHHHHHHHHHHHcCCCeEEEEeecc
Q psy13271         57 TGIPVFNVNNNCSTGSSALMLAKQFIESGSDCTLALGFEK   96 (110)
Q Consensus        57 ~~~~~~~i~~~C~sg~~al~~A~~~i~sG~~~vlv~g~e~   96 (110)
                      ++ |++++.++|+|++.||..|+++|++|.|.+|++|+|.
T Consensus       151 ~G-p~~ti~~acaS~~~Al~~A~~~i~~G~d~~i~gg~d~  189 (399)
T cd00832         151 RG-PSGVVVAEQAGGLDALAQARRLVRRGTPLVVSGGVDS  189 (399)
T ss_pred             CC-CcccccchhHHHHHHHHHHHHHHHcCCCeEEEEeecc
Confidence            87 9999999999999999999999999988999999987

CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.

>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.09  E-value=1.3e-09  Score=80.48  Aligned_cols=47  Identities=23%  Similarity=0.479  Sum_probs=43.2

Q ss_pred             HHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeecc
Q psy13271         49 RALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEK   96 (110)
Q Consensus        49 ~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~   96 (110)
                      .++..+|+++ ++++++++|+|+..||.+|+++|++| +|++||+|+|.
T Consensus       157 ~i~~~~gl~G-~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~  204 (425)
T PRK06501        157 RLADRFGTRG-LPISLSTACASGATAIQLGVEAIRRGETDRALCIATDG  204 (425)
T ss_pred             HHHHHhCCCC-CceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecc
Confidence            4567899976 88999999999999999999999999 99999999994

>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.09  E-value=3.4e-10  Score=91.24  Aligned_cols=85  Identities=32%  Similarity=0.452  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCc----------------------chhHHHHHcCCCCCCeeeEe
Q psy13271         12 ELAKEALIKALDDAGISINQVQ----QACCGYVYGDST----------------------CGQRALYQIGMTGIPVFNVN   65 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~~----------------------~~~~~a~~lg~~~~~~~~i~   65 (110)
                      .|..+.++++|+++|++++.+.    +|+.|....++.                      .+.+++..||+++ |.+.|+
T Consensus        93 RllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~G-Ps~~vd  171 (1061)
T COG3321          93 RLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSG-PSVTVD  171 (1061)
T ss_pred             hHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcCCC-CCcccc
Confidence            3899999999999999999888    677776655442                      1234677899997 999999


Q ss_pred             ccchHHHHHHHHHHHHHHcC-CCeEEEEeeccC
Q psy13271         66 NNCSTGSSALMLAKQFIESG-SDCTLALGFEKM   97 (110)
Q Consensus        66 ~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~   97 (110)
                      ++|+|++.|+++|++.|++| +|.+|++|+..+
T Consensus       172 taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~  204 (1061)
T COG3321         172 TACSSSLVAVHLACQSLRLGECDLALAGGVNLV  204 (1061)
T ss_pred             chhhHHHHHHHHHHHHHHcCCCCEEEecceEec
Confidence            99999999999999999999 999999999875

>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.08  E-value=1.6e-09  Score=80.01  Aligned_cols=86  Identities=17%  Similarity=0.182  Sum_probs=65.4

Q ss_pred             HHHHHHHHHHHHHHcCCCccccC--eEEEEeecCCCc-----------------------------chhHHHHHcCCCCC
Q psy13271         11 PELAKEALIKALDDAGISINQVQ--QACCGYVYGDST-----------------------------CGQRALYQIGMTGI   59 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id--~vi~~~~~~~~~-----------------------------~~~~~a~~lg~~~~   59 (110)
                      ..++..++++||+++|++..+.+  ++++|+..+...                             ....++..+|+++ 
T Consensus        84 ~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G-  162 (418)
T PRK07910         84 QRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKA-  162 (418)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCCC-
Confidence            44788899999999997432222  566776543210                             0012345678886 


Q ss_pred             CeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccC
Q psy13271         60 PVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKM   97 (110)
Q Consensus        60 ~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~   97 (110)
                      |++++.++|+|++.||++|+++|++| +|.+|++|+|..
T Consensus       163 ~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~  201 (418)
T PRK07910        163 GVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETR  201 (418)
T ss_pred             CcccccchhHHHHHHHHHHHHHHHcCCCCEEEEcccccc
Confidence            89999999999999999999999999 999999999974

>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.04  E-value=1.5e-09  Score=79.28  Aligned_cols=84  Identities=29%  Similarity=0.378  Sum_probs=66.1

Q ss_pred             HHHHHHHHHHHHHcCCCcccc-CeEEEEeecCCC------------------------c----c----hhHHHHHcCCCC
Q psy13271         12 ELAKEALIKALDDAGISINQV-QQACCGYVYGDS------------------------T----C----GQRALYQIGMTG   58 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~i-d~vi~~~~~~~~------------------------~----~----~~~~a~~lg~~~   58 (110)
                      .+...++++||+++|++++.- =++++|+..+..                        .    .    ...++..+|+++
T Consensus        58 ~~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~G  137 (381)
T PRK05952         58 DLTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQG  137 (381)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCC
Confidence            466789999999999975321 267777754320                        0    0    123456789987


Q ss_pred             CCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeecc
Q psy13271         59 IPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEK   96 (110)
Q Consensus        59 ~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~   96 (110)
                       |++++.++|+|++.||..|+++|++| +|.+||+|+|.
T Consensus       138 -p~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~  175 (381)
T PRK05952        138 -PVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEA  175 (381)
T ss_pred             -ccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccc
Confidence             99999999999999999999999999 99999999996

>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.04  E-value=1.6e-09  Score=76.35  Aligned_cols=89  Identities=19%  Similarity=0.264  Sum_probs=74.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch--hHHHHHcCCCC-CCeeeE-eccchHHHHHHHHHHHHHHcC
Q psy13271         10 YPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG--QRALYQIGMTG-IPVFNV-NNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~--~~~a~~lg~~~-~~~~~i-~~~C~sg~~al~~A~~~i~sG   85 (110)
                      ...|.+++.++||+.+++.++|||.|++.++++-..++  .++...||+++ ..-+-+ ..||++|..++..|.++.++.
T Consensus        76 a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~  155 (356)
T COG3424          76 AVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAA  155 (356)
T ss_pred             HHHHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhC
Confidence            44589999999999999999999999999887654432  57889999964 233333 479999999999999999999


Q ss_pred             -CCeEEEEeeccCC
Q psy13271         86 -SDCTLALGFEKME   98 (110)
Q Consensus        86 -~~~vlv~g~e~~s   98 (110)
                       ..+||++.+|..|
T Consensus       156 P~~~vlvV~vELCS  169 (356)
T COG3424         156 PDANVLVVCVELCS  169 (356)
T ss_pred             ccceEEEEEeeeee
Confidence             9999999999865

>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.01  E-value=2.4e-09  Score=78.75  Aligned_cols=88  Identities=28%  Similarity=0.428  Sum_probs=69.2

Q ss_pred             CCHHHHHHHHHHHHHHHcCCC-ccccC---eEEEEeecCCCc----------------------c--------hhHHHHH
Q psy13271          8 TDYPELAKEALIKALDDAGIS-INQVQ---QACCGYVYGDST----------------------C--------GQRALYQ   53 (110)
Q Consensus         8 ~~~~~l~~~a~~~al~~agl~-~~~id---~vi~~~~~~~~~----------------------~--------~~~~a~~   53 (110)
                      .+...++..|+.+||+++|++ ..+.+   ++++|+..++..                      .        ...++..
T Consensus        69 d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~  148 (412)
T COG0304          69 DRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIV  148 (412)
T ss_pred             cHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHH
Confidence            356679999999999999997 33342   456666543321                      0        0134567


Q ss_pred             cCCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeecc
Q psy13271         54 IGMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEK   96 (110)
Q Consensus        54 lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~   96 (110)
                      +|+++ +.+++.++|+++.++|..|+++|+.| +|++|++|+|.
T Consensus       149 ~g~~G-~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~  191 (412)
T COG0304         149 FGLKG-PNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEA  191 (412)
T ss_pred             hCCCC-CcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEccccc
Confidence            89987 89999999999999999999999999 99999999976

>KOG1389|consensus

Probab=99.01  E-value=1.6e-09  Score=76.71  Aligned_cols=95  Identities=26%  Similarity=0.371  Sum_probs=81.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc--hhHHH-HHcCCC-CCCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC--GQRAL-YQIGMT-GIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~--~~~~a-~~lg~~-~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      ++..+-+|...+.+..+++.+++|+.|.-|++|+.......  ..+++ -+.|++ .+|..+++..|+||++++..-+..
T Consensus        57 kdt~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tvpv~tvNRqCsSGLqaVadiA~~  136 (435)
T KOG1389|consen   57 KDTRPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADIAAK  136 (435)
T ss_pred             ccCChHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCcccchhhhhhhhhhHHHHHHHHHHH
Confidence            68889999999999999999999999999999998654322  12333 356774 578889999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKG  100 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~  100 (110)
                      |++| +|.-|..|.|.|+..
T Consensus       137 Ir~G~ydIGla~GvESMt~~  156 (435)
T KOG1389|consen  137 IRAGFYDIGLAAGVESMTTN  156 (435)
T ss_pred             HhcCceeeecccchhhhccc
Confidence            9999 999999999999876

>KOG1392|consensus

Probab=98.98  E-value=4.4e-10  Score=78.95  Aligned_cols=99  Identities=23%  Similarity=0.337  Sum_probs=84.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHH----HcCCC-CCCeeeEeccchHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALY----QIGMT-GIPVFNVNNNCSTGSSALMLAKQ   80 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~----~lg~~-~~~~~~i~~~C~sg~~al~~A~~   80 (110)
                      +++-+.+|+.++...+|++..++.+.+|.||+|+..++.- ..++++    ..|+. ..|..++..+|-|...|+..+..
T Consensus        62 kdlmphdlar~al~~ll~kt~lpke~~dyii~gtviqevk-tsniareaal~agfsdktpahtvtmacissn~amttgmg  140 (465)
T KOG1392|consen   62 KDLMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVK-TSNIAREAALLAGFSDKTPAHTVTMACISSNVAMTTGMG  140 (465)
T ss_pred             hhhchhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHh-cchHHHHHHHhcCCCCCCccceeeeehhccchhhhccce
Confidence            5678889999999999999999999999999998865432 123333    35674 36899999999999999999999


Q ss_pred             HHHcC-CCeEEEEeeccCCCCCCCCC
Q psy13271         81 FIESG-SDCTLALGFEKMEKGSLGAK  105 (110)
Q Consensus        81 ~i~sG-~~~vlv~g~e~~s~~~~~~~  105 (110)
                      +|++| +|+++.+|+|.||+.|.-.+
T Consensus       141 liatg~~dvivaggvelmsdvpirhs  166 (465)
T KOG1392|consen  141 LIATGNADVIVAGGVELMSDVPIRHS  166 (465)
T ss_pred             eEeeCCcCEEEEcceeecccCchhhh
Confidence            99999 99999999999999997554

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.97  E-value=4e-09  Score=90.58  Aligned_cols=47  Identities=19%  Similarity=0.260  Sum_probs=43.9

Q ss_pred             HHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeecc
Q psy13271         49 RALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEK   96 (110)
Q Consensus        49 ~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~   96 (110)
                      +++..||+++ |+++|+++|+|++.||+.|++.|++| +|.+|++|++.
T Consensus       188 RIS~~f~L~G-ps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~  235 (2582)
T TIGR02813       188 RIANRFDLGG-MNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCT  235 (2582)
T ss_pred             HHHHHhCCCC-CcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccee
Confidence            4667899987 99999999999999999999999999 99999999886

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1394|consensus

Probab=98.96  E-value=1.1e-09  Score=78.48  Aligned_cols=87  Identities=31%  Similarity=0.394  Sum_probs=71.7

Q ss_pred             CHHHHHHHHHHHHHHHcCCCcc---ccC----eEEEEeecCCCc---------------------ch--------hHHHH
Q psy13271          9 DYPELAKEALIKALDDAGISIN---QVQ----QACCGYVYGDST---------------------CG--------QRALY   52 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~---~id----~vi~~~~~~~~~---------------------~~--------~~~a~   52 (110)
                      ++..|++.|+.+||+++++.+.   +.|    +|.+|+.+++..                     .|        ..++.
T Consensus        93 ~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm  172 (440)
T KOG1394|consen   93 KFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSM  172 (440)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhh
Confidence            5667999999999999998765   233    788888776521                     11        23556


Q ss_pred             HcCCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeecc
Q psy13271         53 QIGMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEK   96 (110)
Q Consensus        53 ~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~   96 (110)
                      .+|+++ |..+++++|++|.++|..+.++|+.| +|+.|+++.|.
T Consensus       173 ~~gl~G-pnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~  216 (440)
T KOG1394|consen  173 KYGLRG-PNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEA  216 (440)
T ss_pred             hhcCcC-CchhhHhhhhhccchHHHHHHHHHhCccceeeccCcce
Confidence            789987 99999999999999999999999999 99999999987

>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long

Probab=98.91  E-value=3e-08  Score=69.96  Aligned_cols=84  Identities=25%  Similarity=0.395  Sum_probs=66.0

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEE
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTL   90 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vl   90 (110)
                      .|..+|++.+|+++++.++|||.++.|-...+....+..++.|++   |-+-+-.+|++...+|.+|+.+|..| ++++|
T Consensus        53 ~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i~s~f~ar~l~i---Pf~GlygACST~~e~l~laa~~vdgg~a~~vl  129 (329)
T PF07451_consen   53 KMQKEAVELALKKAGLKKEDIDYLFAGDLLNQIISSSFAARDLGI---PFLGLYGACSTMMESLALAAMLVDGGFADYVL  129 (329)
T ss_dssp             HHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCCHHHHHHHHHT-----EEEB--CCCHHHHHHHHHHHHHHTTS-SEEE
T ss_pred             HHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhHHHHHHHHhcCC---CccchhhHHHHHHHHHHHHHHHHhCCCcceEE
Confidence            489999999999999999999999999877776666677788865   77888899999999999999999999 99999


Q ss_pred             EEeeccCC
Q psy13271         91 ALGFEKME   98 (110)
Q Consensus        91 v~g~e~~s   98 (110)
                      +..+....
T Consensus       130 a~tSSH~~  137 (329)
T PF07451_consen  130 AATSSHFA  137 (329)
T ss_dssp             EEEEE-CC
T ss_pred             EEeccccc
Confidence            98865543

This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.

>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=98.70  E-value=1.9e-07  Score=68.39  Aligned_cols=50  Identities=20%  Similarity=0.551  Sum_probs=45.0

Q ss_pred             HHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCCC
Q psy13271         49 RALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEK   99 (110)
Q Consensus        49 ~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s~   99 (110)
                      .++..+|+++ |.+++.++|+|++.||..|+++|++| +|++||+++|.+++
T Consensus       142 ~ia~~lgl~G-p~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~  192 (392)
T PRK09185        142 FLRAYLGLSG-PAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCR  192 (392)
T ss_pred             HHHHHhCCCC-CcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccCh
Confidence            3567899987 99999999999999999999999999 99999999997543

>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways

Probab=98.64  E-value=8.2e-08  Score=55.53  Aligned_cols=39  Identities=28%  Similarity=0.470  Sum_probs=35.1

Q ss_pred             eeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCCCC
Q psy13271         62 FNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKG  100 (110)
Q Consensus        62 ~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s~~  100 (110)
                      |+++++|++++.+|+.|..+|++| ++++||+++|..++.
T Consensus         1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~~   40 (80)
T PF08545_consen    1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSRI   40 (80)
T ss_dssp             EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGGG
T ss_pred             CcccccchHHHHHHHHHHHHHhhccCCEEEEEeecccccc
Confidence            689999999999999999999999 999999999998873

The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....

>KOG1202|consensus

Probab=98.53  E-value=9.5e-08  Score=77.28  Aligned_cols=88  Identities=30%  Similarity=0.410  Sum_probs=70.2

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCc----------------------chhHHHHHcCCCCCCee
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQ----QACCGYVYGDST----------------------CGQRALYQIGMTGIPVF   62 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~~----------------------~~~~~a~~lg~~~~~~~   62 (110)
                      +...|..++.++|+-|+||.|.++.    +++++.+.++..                      ..++++..+.+++ |.+
T Consensus        86 Pq~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqG-PS~  164 (2376)
T KOG1202|consen   86 PQLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQG-PSF  164 (2376)
T ss_pred             HHHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccC-Cch
Confidence            3446999999999999999999987    566665543211                      0122333467876 999


Q ss_pred             eEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccC
Q psy13271         63 NVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKM   97 (110)
Q Consensus        63 ~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~   97 (110)
                      .++++|+|...++..|++.+++| +|.+||.|+...
T Consensus       165 s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~li  200 (2376)
T KOG1202|consen  165 SVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLI  200 (2376)
T ss_pred             hhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceE
Confidence            99999999999999999999999 999999998764

>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain

Probab=97.26  E-value=0.0063  Score=41.62  Aligned_cols=91  Identities=16%  Similarity=0.112  Sum_probs=65.5

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc---------------h--------hHHHH----HcCCCCCCe
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC---------------G--------QRALY----QIGMTGIPV   61 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~---------------~--------~~~a~----~lg~~~~~~   61 (110)
                      ....|+++++.+++++.    .++|.+|+++..|+...               |        +.++.    ..+.+ .+.
T Consensus        33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~-~~~  107 (218)
T PF13723_consen   33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNT-GPN  107 (218)
T ss_pred             HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCC-Cce
Confidence            34568888888877542    56789999988776420               0        11222    33444 488


Q ss_pred             eeEeccchHHHHHHHHHHHHHHcCCCeEEEEeeccCCCCCCCC
Q psy13271         62 FNVNNNCSTGSSALMLAKQFIESGSDCTLALGFEKMEKGSLGA  104 (110)
Q Consensus        62 ~~i~~~C~sg~~al~~A~~~i~sG~~~vlv~g~e~~s~~~~~~  104 (110)
                      .++..+-.++..||..|..++..|.+.||++.+|.....++..
T Consensus       108 tal~a~~~sf~~aLleA~~~l~~~~~~VLlv~~De~~p~~y~~  150 (218)
T PF13723_consen  108 TALAAGEDSFEAALLEAAAQLAEGAEPVLLVCYDEPLPEPYQE  150 (218)
T ss_pred             EEEecCcchHHHHHHHHHHHHHcCCCCEEEEEeCCCCChhhhh
Confidence            8999999999999999999999998888888888866555443

>KOG1393|consensus

Probab=97.01  E-value=0.004  Score=45.71  Aligned_cols=90  Identities=19%  Similarity=0.233  Sum_probs=70.4

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeec-CCCc--chhHHHHHc---CCCCCCeeeEeccchHHHHHHHHHHH
Q psy13271          7 DTDYPELAKEALIKALDDAGISINQVQQACCGYVY-GDST--CGQRALYQI---GMTGIPVFNVNNNCSTGSSALMLAKQ   80 (110)
Q Consensus         7 ~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~-~~~~--~~~~~a~~l---g~~~~~~~~i~~~C~sg~~al~~A~~   80 (110)
                      .++...|...++.+++++-+++++.|..+-+|+-+ .|..  .-..+...+   |-.++..++..++|=+|..||-.|.+
T Consensus        57 rEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttnACYGGtaALfnavn  136 (462)
T KOG1393|consen   57 REDIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAALFNAVN  136 (462)
T ss_pred             hhhhhhhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccccccccccccccHHHHHHHhh
Confidence            35677899999999999999999999999998742 2221  112334444   44567788889999999999999999


Q ss_pred             HHHcC---CCeEEEEeecc
Q psy13271         81 FIESG---SDCTLALGFEK   96 (110)
Q Consensus        81 ~i~sG---~~~vlv~g~e~   96 (110)
                      .|.+.   -+.+||+.+|.
T Consensus       137 WiESssWDGr~aivV~gDI  155 (462)
T KOG1393|consen  137 WIESSSWDGRYAIVVCGDI  155 (462)
T ss_pred             hhhhcccCCceeEEEEeeE
Confidence            99988   67888888774

>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2

Probab=95.99  E-value=0.022  Score=33.11  Aligned_cols=71  Identities=20%  Similarity=0.166  Sum_probs=41.1

Q ss_pred             HHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC-CCeeeE----eccchHHHHHHHHHHH--HHHcCCCeEEEEee
Q psy13271         22 LDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG-IPVFNV----NNNCSTGSSALMLAKQ--FIESGSDCTLALGF   94 (110)
Q Consensus        22 l~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~-~~~~~i----~~~C~sg~~al~~A~~--~i~sG~~~vlv~g~   94 (110)
                      |+++|++++|||.++......  ..-..+++.+|++. .....+    +.+|++-..++..+.+  .++. -|.+++++.
T Consensus         1 L~~~g~~~~did~~i~hq~~~--~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~-Gd~vl~~~~   77 (90)
T PF08541_consen    1 LERAGLSPDDIDHFIPHQASK--KILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKP-GDRVLLVGF   77 (90)
T ss_dssp             HHHTT--GGGESEEEE-SSSH--HHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCT-TEEEEEEEE
T ss_pred             CccccCCHHHCCEEEeCCCCH--HHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCC-CCEEEEEEE
Confidence            689999999999999754321  12234677888853 111122    4577777777776666  3333 367777765


Q ss_pred             c
Q psy13271         95 E   95 (110)
Q Consensus        95 e   95 (110)
                      -
T Consensus        78 G   78 (90)
T PF08541_consen   78 G   78 (90)
T ss_dssp             E
T ss_pred             E
Confidence            4

3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....

>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated

Probab=95.60  E-value=0.072  Score=38.70  Aligned_cols=85  Identities=12%  Similarity=0.109  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc---chhHHHHHcCC--CCCCeee----E-eccchHHHHHHHHHHHH
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYVYGDST---CGQRALYQIGM--TGIPVFN----V-NNNCSTGSSALMLAKQF   81 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~---~~~~~a~~lg~--~~~~~~~----i-~~~C~sg~~al~~A~~~   81 (110)
                      +-..++++++|+++|+++++||.|+.......+.   ....+.+.++-  ...+...    + +.+.++|...+..+...
T Consensus       234 ~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~  313 (348)
T PRK06147        234 DGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAA  313 (348)
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHH
Confidence            4456889999999999999999987532211111   12233344442  1223222    2 34666777777778888


Q ss_pred             HHcC---CCeEEEEeecc
Q psy13271         82 IESG---SDCTLALGFEK   96 (110)
Q Consensus        82 i~sG---~~~vlv~g~e~   96 (110)
                      ++.|   .+++|+.+.+-
T Consensus       314 ~~~g~~~g~~~L~~s~~d  331 (348)
T PRK06147        314 SRKGYGPGPNVLCHLSDD  331 (348)
T ss_pred             HHcCcCCCCcEEEEecCC
Confidence            8898   36688877654

>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative

Probab=95.27  E-value=0.077  Score=38.46  Aligned_cols=83  Identities=17%  Similarity=0.191  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC--CC-ee---eE-eccchHHHHHHHHHHHHH
Q psy13271         10 YPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG--IP-VF---NV-NNNCSTGSSALMLAKQFI   82 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~--~~-~~---~i-~~~C~sg~~al~~A~~~i   82 (110)
                      ....+.++++++|+++|++++|||.+++-....  .....+.+.+|+..  .+ .+   .+ ++++++--.+|..+...+
T Consensus       206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~--~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~~~  283 (345)
T TIGR00748       206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNG--KFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLDIA  283 (345)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCCh--HHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHHhc
Confidence            345566888999999999999999998743321  13345677888752  11 11   23 456777777777776655


Q ss_pred             HcCCCeEEEEeec
Q psy13271         83 ESGSDCTLALGFE   95 (110)
Q Consensus        83 ~sG~~~vlv~g~e   95 (110)
                      +.| |.+++++.-
T Consensus       284 ~~G-d~vll~~~G  295 (345)
T TIGR00748       284 EPG-DRILAVSYG  295 (345)
T ss_pred             CCC-CEEEEEEec
Confidence            555 667766643

Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.

>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2

Probab=95.26  E-value=0.044  Score=33.62  Aligned_cols=74  Identities=23%  Similarity=0.197  Sum_probs=43.3

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCC----CCCeeeE-----eccchHHHHHHHHHH
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMT----GIPVFNV-----NNNCSTGSSALMLAK   79 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~----~~~~~~i-----~~~C~sg~~al~~A~   79 (110)
                      +-..++++++|++++++++|||.|............   ..+.+.++-.    +++...+     ....++|+..+..+.
T Consensus        25 ~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~  104 (119)
T PF02801_consen   25 AALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKAL  104 (119)
T ss_dssp             HHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHH
Confidence            344778999999999999999998754321111111   1233334322    1232222     357788998998888


Q ss_pred             HHHHcC
Q psy13271         80 QFIESG   85 (110)
Q Consensus        80 ~~i~sG   85 (110)
                      ..++.|
T Consensus       105 l~l~~~  110 (119)
T PF02801_consen  105 LALEHG  110 (119)
T ss_dssp             HHHHHT
T ss_pred             HHHhcC
Confidence            888877

3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....

>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=94.64  E-value=0.28  Score=35.96  Aligned_cols=80  Identities=11%  Similarity=0.056  Sum_probs=49.4

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHc-----CCCC-CCeeeE----eccchHHHHHHHHHHH--H
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQI-----GMTG-IPVFNV----NNNCSTGSSALMLAKQ--F   81 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~l-----g~~~-~~~~~i----~~~C~sg~~al~~A~~--~   81 (110)
                      ..+.++++|+++|+.++|||.++.-....  ..-..+++.|     |+.. .....+    +++|++--.+|+.+..  .
T Consensus       274 ~~~~i~~~L~~~gl~~~DId~~v~Hq~n~--~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~a~~~g~  351 (378)
T PRK06816        274 TIKPLLELVDKRNLDPDDIDYFLPHYSSE--YFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDELLNSGR  351 (378)
T ss_pred             HHHHHHHHHHHcCCChhhCCEEeeCcccH--HHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHHHHHcCC
Confidence            36677889999999999999988643321  1223455655     6642 222233    4667777777766644  3


Q ss_pred             HHcCCCeEEEEeecc
Q psy13271         82 IESGSDCTLALGFEK   96 (110)
Q Consensus        82 i~sG~~~vlv~g~e~   96 (110)
                      ++.| |.+++.+.+.
T Consensus       352 ~~~G-d~vl~~~~~s  365 (378)
T PRK06816        352 LKPG-QKILCFVPES  365 (378)
T ss_pred             CCCC-CEEEEEEecc
Confidence            3334 6777776554

>PRK08257 acetyl-CoA acetyltransferase; Validated

Probab=94.11  E-value=0.33  Score=37.10  Aligned_cols=79  Identities=15%  Similarity=0.077  Sum_probs=50.9

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCC---Ceee-------EeccchHHHHHHHHHHHHH
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGI---PVFN-------VNNNCSTGSSALMLAKQFI   82 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~---~~~~-------i~~~C~sg~~al~~A~~~i   82 (110)
                      ....+++++++++|++++|||.+=+-.+++-  ......+.||+...   |...       =....++|++.+..+...+
T Consensus       293 ~~~~aa~~a~~~AGi~~~Did~~elydcF~~--~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QL  370 (498)
T PRK08257        293 AIRAAGRRALALAGLGIDDIDAFDLYSCFPS--AVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERL  370 (498)
T ss_pred             HHHHHHHHHHHHhCCCHHHCCEEEeccCCHH--HHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHHH
Confidence            3456899999999999999998865443321  11223356777421   2211       1233455777888888888


Q ss_pred             HcC-CCeEEEEe
Q psy13271         83 ESG-SDCTLALG   93 (110)
Q Consensus        83 ~sG-~~~vlv~g   93 (110)
                      +.. .++.|+.+
T Consensus       371 Rg~~~~~gLv~~  382 (498)
T PRK08257        371 RANPGRRGLVTA  382 (498)
T ss_pred             hhcCCCEEEEEC
Confidence            876 77777765

>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria

Probab=93.99  E-value=0.25  Score=36.59  Aligned_cols=75  Identities=20%  Similarity=0.170  Sum_probs=47.9

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEe-ecC--CCcchhHHHHHcCCCCCCeeeE-----eccchHHHHHHHHHHHHH
Q psy13271         11 PELAKEALIKALDDAGISINQVQQACCGY-VYG--DSTCGQRALYQIGMTGIPVFNV-----NNNCSTGSSALMLAKQFI   82 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id~vi~~~-~~~--~~~~~~~~a~~lg~~~~~~~~i-----~~~C~sg~~al~~A~~~i   82 (110)
                      .+-..++++++|+++|+++++||.|.... .++  |......+.+.+|-...|...+     ...+++|...+..+...+
T Consensus       269 ~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l  348 (399)
T cd00832         269 PPGLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPRGVPVTAPKTMTGRLYAGGAPLDVATALLAL  348 (399)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCCCCCceeCCCchhcchHHHHHHHHHHHHHHHH
Confidence            34456789999999999999999876532 222  1111223445566433333222     345677777787788888


Q ss_pred             HcC
Q psy13271         83 ESG   85 (110)
Q Consensus        83 ~sG   85 (110)
                      +.|
T Consensus       349 ~~~  351 (399)
T cd00832         349 RDG  351 (399)
T ss_pred             hCC
Confidence            888

CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.

>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=93.98  E-value=0.24  Score=35.51  Aligned_cols=82  Identities=22%  Similarity=0.263  Sum_probs=48.6

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC-CCeeeE----eccchHHHHHHHHHHHH--HHc
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG-IPVFNV----NNNCSTGSSALMLAKQF--IES   84 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~-~~~~~i----~~~C~sg~~al~~A~~~--i~s   84 (110)
                      ....++++++|+++|++++|||.+++....  ...-..+.+.+|+.. .....+    +.++++-..+|+.+.+.  ++.
T Consensus       239 ~~~~~~~~~~L~~~g~~~~did~~i~H~~~--~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~~~~g~~~~  316 (338)
T PRK09258        239 ELAVDTWEAFLAQLGWAVEQVDRVICHQVG--AAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMAAEEGFLKP  316 (338)
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEecCCCC--HHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHHHHhCCCCC
Confidence            344567888999999999999998874422  112345677888852 112222    34455555555554433  333


Q ss_pred             CCCeEEEEeecc
Q psy13271         85 GSDCTLALGFEK   96 (110)
Q Consensus        85 G~~~vlv~g~e~   96 (110)
                      | |.+++++...
T Consensus       317 G-d~vll~~~G~  327 (338)
T PRK09258        317 G-DRVALLGIGS  327 (338)
T ss_pred             C-CEEEEEEech
Confidence            3 6677776543

>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=93.88  E-value=0.31  Score=35.59  Aligned_cols=79  Identities=14%  Similarity=0.151  Sum_probs=48.2

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHH-cCCCC---CCeeeE----eccchHHHHHHHHHHHHHHc
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQ-IGMTG---IPVFNV----NNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~-lg~~~---~~~~~i----~~~C~sg~~al~~A~~~i~s   84 (110)
                      ...++++++|+++|++++|||.++.-....  .....+.+. ||+..   .....+    +++|++-..++..+...++.
T Consensus       272 ~~~~~i~~~L~~~gl~~~dId~~~~Hq~~~--~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~~~~~~~~  349 (372)
T PRK07515        272 MVAEHIVEHLAENGLTPADVKRFWLHQANI--NMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHKHSDDLAA  349 (372)
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEECCCCH--HHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHHHhccCCC
Confidence            467889999999999999999998743211  112233444 56521   111222    46677777777766555544


Q ss_pred             CCCeEEEEee
Q psy13271         85 GSDCTLALGF   94 (110)
Q Consensus        85 G~~~vlv~g~   94 (110)
                      | |.++.++.
T Consensus       350 G-d~vll~~~  358 (372)
T PRK07515        350 G-DLGVICSF  358 (372)
T ss_pred             C-CEEEEEEe
Confidence            4 66666654

>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=93.59  E-value=0.37  Score=34.37  Aligned_cols=78  Identities=13%  Similarity=0.068  Sum_probs=44.8

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC-CCeeeE----eccchHHHHHHHHHHHHHHcC--
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG-IPVFNV----NNNCSTGSSALMLAKQFIESG--   85 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~-~~~~~i----~~~C~sg~~al~~A~~~i~sG--   85 (110)
                      ...++++++|+++|++++|||.++.-..  .......+.+.+|+.. .....+    +.++++-..+|..   +++.|  
T Consensus       228 ~~~~~~~~~L~~~gl~~~did~~~~h~~--~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~---~~~~~~~  302 (326)
T PRK05963        228 MMSGASQNVLASAAMTPQDIDRFFPHQA--NARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSL---ANLEQPL  302 (326)
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEeCCC--CHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHH---HHHhCCC
Confidence            4456788999999999999999887332  2222345667788842 111222    2233333334433   33333  


Q ss_pred             --CCeEEEEeec
Q psy13271         86 --SDCTLALGFE   95 (110)
Q Consensus        86 --~~~vlv~g~e   95 (110)
                        -|.+|+++.-
T Consensus       303 ~~Gd~vll~~~G  314 (326)
T PRK05963        303 REGERLLFAAAG  314 (326)
T ss_pred             CCCCEEEEEEEe
Confidence              3677777653

>PRK04262 hypothetical protein; Provisional

Probab=93.28  E-value=0.31  Score=35.28  Aligned_cols=80  Identities=14%  Similarity=0.156  Sum_probs=50.9

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC--CCe-e---eE-eccchHHHHHHHHHHHHHHc
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG--IPV-F---NV-NNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~--~~~-~---~i-~~~C~sg~~al~~A~~~i~s   84 (110)
                      ....++++++|+++|++++|||.+++-..  .......+.+.||+..  .+. .   .+ +.++++-..+|..+...++.
T Consensus       209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq~--n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~~~~~  286 (347)
T PRK04262        209 KHIISAAKGLMEKLGLKPSDYDYAVFHQP--NGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLDVAKP  286 (347)
T ss_pred             HHHHHHHHHHHHHhCcCHHHhceeecCCC--chHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHHhCCC
Confidence            46678889999999999999999887432  2223345677888852  111 1   22 34555666666666554333


Q ss_pred             CCCeEEEEee
Q psy13271         85 GSDCTLALGF   94 (110)
Q Consensus        85 G~~~vlv~g~   94 (110)
                       -|.+|.++.
T Consensus       287 -Gd~vll~~~  295 (347)
T PRK04262        287 -GDRILVVSF  295 (347)
T ss_pred             -CCEEEEEec
Confidence             467776664

>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II

Probab=93.27  E-value=0.34  Score=35.41  Aligned_cols=77  Identities=19%  Similarity=0.153  Sum_probs=49.3

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEee-cC--CCcchhHHHHHcCCC--CCCeeeE-----eccchHHHHHHHHHHHH
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYV-YG--DSTCGQRALYQIGMT--GIPVFNV-----NNNCSTGSSALMLAKQF   81 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~-~~--~~~~~~~~a~~lg~~--~~~~~~i-----~~~C~sg~~al~~A~~~   81 (110)
                      +-..++++++|++++++++|||.+..... ++  +......+...++-.  ..+....     +..+++|+..+..+...
T Consensus       275 ~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~  354 (406)
T cd00834         275 EGAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLA  354 (406)
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHH
Confidence            44567889999999999999998875432 21  111112333444431  2232221     35788999999999999


Q ss_pred             HHcC-CCe
Q psy13271         82 IESG-SDC   88 (110)
Q Consensus        82 i~sG-~~~   88 (110)
                      ++.| .--
T Consensus       355 l~~~~ip~  362 (406)
T cd00834         355 LRDGVLPP  362 (406)
T ss_pred             HhcCCcCC
Confidence            9999 443

KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.

>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=93.25  E-value=0.33  Score=35.82  Aligned_cols=73  Identities=11%  Similarity=0.112  Sum_probs=46.9

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEE-EeecC--CCcchhHHHHHcCCCCCCeeeE-----eccchHHHHHHHHHHHHHH
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACC-GYVYG--DSTCGQRALYQIGMTGIPVFNV-----NNNCSTGSSALMLAKQFIE   83 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~-~~~~~--~~~~~~~~a~~lg~~~~~~~~i-----~~~C~sg~~al~~A~~~i~   83 (110)
                      +...++++++|+++|++++|||.|.. ++.++  |......+.+.+|- ..+...+     ....++|...+..+...++
T Consensus       254 ~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg~-~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~  332 (381)
T PRK05952        254 KSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFPH-RVAVSSTKGATGHTLGASGALGVAFSLLALR  332 (381)
T ss_pred             HHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcCC-CCeeecchhhhccChHHHHHHHHHHHHHHHh
Confidence            45678999999999999999999864 33322  22112234444542 2232222     3456777888888888888


Q ss_pred             cC
Q psy13271         84 SG   85 (110)
Q Consensus        84 sG   85 (110)
                      .|
T Consensus       333 ~~  334 (381)
T PRK05952        333 HQ  334 (381)
T ss_pred             cC
Confidence            88

>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=93.03  E-value=0.4  Score=34.25  Aligned_cols=42  Identities=14%  Similarity=0.113  Sum_probs=30.7

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCC
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMT   57 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~   57 (110)
                      ..++++++|+++|++++|||.++.-...  ...-..+.+.||+.
T Consensus       232 ~~~~i~~~L~~~gl~~~did~~~~H~~~--~~~~~~i~~~l~l~  273 (329)
T PRK07204        232 LMKFIDKLLMDAGYTLADIDLIVPHQAS--GPAMRLIRKKLGVD  273 (329)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEeCCCC--HHHHHHHHHHcCCC
Confidence            4578899999999999999998864432  11224567778885

>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional

Probab=92.87  E-value=0.33  Score=34.72  Aligned_cols=76  Identities=20%  Similarity=0.205  Sum_probs=45.0

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC-CCeeeE----eccchHHHHHHHHHHHHHHcC---
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG-IPVFNV----NNNCSTGSSALMLAKQFIESG---   85 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~-~~~~~i----~~~C~sg~~al~~A~~~i~sG---   85 (110)
                      ..++++++|+++|++++|||.+++....  ...-..+.+.||+.. .....+    ++++++-..+|..+   ++.|   
T Consensus       228 ~~~~i~~~L~~~g~~~~did~~~~hq~~--~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~---~~~g~~~  302 (326)
T CHL00203        228 VPAVIIKCLNALNISIDEVDWFILHQAN--KRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEA---IQNNKIQ  302 (326)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEECCCC--HHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHH---HHhCCCC
Confidence            4456888999999999999998874432  122345677888852 122222    33444444455444   3443   


Q ss_pred             -CCeEEEEee
Q psy13271         86 -SDCTLALGF   94 (110)
Q Consensus        86 -~~~vlv~g~   94 (110)
                       -|.+++++.
T Consensus       303 ~Gd~vll~~~  312 (326)
T CHL00203        303 PGQIIVLSGF  312 (326)
T ss_pred             CCCEEEEEEE
Confidence             356666654

>PRK06025 acetyl-CoA acetyltransferase; Provisional

Probab=92.86  E-value=0.48  Score=35.55  Aligned_cols=24  Identities=21%  Similarity=0.194  Sum_probs=21.4

Q ss_pred             HHHHHHHHHHcCCCccccCeEEEE
Q psy13271         15 KEALIKALDDAGISINQVQQACCG   38 (110)
Q Consensus        15 ~~a~~~al~~agl~~~~id~vi~~   38 (110)
                      ..+++++|+++|++++|||.+-+.
T Consensus       318 ~~Ai~~aL~~AGl~~~DID~~ei~  341 (417)
T PRK06025        318 VPAAKKVLAKAGLTKDDIDLWEIN  341 (417)
T ss_pred             HHHHHHHHHHcCCCHHHCcEEEEc
Confidence            478999999999999999998764

>PRK06840 hypothetical protein; Validated

Probab=92.62  E-value=0.49  Score=33.95  Aligned_cols=77  Identities=16%  Similarity=0.138  Sum_probs=44.8

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCCCeeeE----eccchHHHHHHHHHHHHHHcC----
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVFNV----NNNCSTGSSALMLAKQFIESG----   85 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~~~~i----~~~C~sg~~al~~A~~~i~sG----   85 (110)
                      ..++++++|+++|++++|||.++.....  ...-..+.+.||+..-....+    +.++++-...|..+   +++|    
T Consensus       239 ~~~~i~~~L~~~gl~~~did~~~~h~~~--~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~~~---~~~~~~~~  313 (339)
T PRK06840        239 FLKVIREALRKSGYTPKDIDYLAILHMK--RSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLHLA---LEQGKLKD  313 (339)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEECCcC--HHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHHHH---HHcCCCCC
Confidence            4578889999999999999998764321  112245677888853111212    23344444444433   3443    


Q ss_pred             CCeEEEEeec
Q psy13271         86 SDCTLALGFE   95 (110)
Q Consensus        86 ~~~vlv~g~e   95 (110)
                      -+++++++.-
T Consensus       314 Gd~ill~~~G  323 (339)
T PRK06840        314 GDLVVLVSAG  323 (339)
T ss_pred             CCEEEEEEEe
Confidence            3566666643

>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=92.61  E-value=0.52  Score=35.17  Aligned_cols=73  Identities=16%  Similarity=0.221  Sum_probs=45.1

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEE-EeecC--CCcchhHHHHHcCCCCCCeeeE-----eccchHHHHHHHHHHHHHHc
Q psy13271         13 LAKEALIKALDDAGISINQVQQACC-GYVYG--DSTCGQRALYQIGMTGIPVFNV-----NNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~-~~~~~--~~~~~~~~a~~lg~~~~~~~~i-----~~~C~sg~~al~~A~~~i~s   84 (110)
                      -..++++++|+++|++++|||.+-. ++.++  |......+.+.+|-...+...+     ....++|...+..+...++.
T Consensus       287 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~~~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~  366 (418)
T PRK07910        287 RAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAVYAPKSALGHSVGAVGAVESILTVLALRD  366 (418)
T ss_pred             HHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCCCCCceeCccccccccHHHHHHHHHHHHHHHHhc
Confidence            3568899999999999999999854 33222  2211233455566422122211     34556777777777778888


Q ss_pred             C
Q psy13271         85 G   85 (110)
Q Consensus        85 G   85 (110)
                      |
T Consensus       367 ~  367 (418)
T PRK07910        367 G  367 (418)
T ss_pred             C
Confidence            7

>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II

Probab=92.58  E-value=0.49  Score=34.69  Aligned_cols=73  Identities=21%  Similarity=0.149  Sum_probs=45.4

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEE-eecC--CCcchhHHHHHcCCC--CCCeeeE-----eccchHHHHHHHHHHHHH
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCG-YVYG--DSTCGQRALYQIGMT--GIPVFNV-----NNNCSTGSSALMLAKQFI   82 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~-~~~~--~~~~~~~~a~~lg~~--~~~~~~i-----~~~C~sg~~al~~A~~~i   82 (110)
                      -..++++++|+++|++++|||.+... +.++  |......+...++-.  ..+...+     +...++|+..+..+...+
T Consensus       276 ~~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l  355 (407)
T TIGR03150       276 GAARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAI  355 (407)
T ss_pred             HHHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhccCCCCCceeCCcchhchhHHHHHHHHHHHHHHHH
Confidence            35678999999999999999988643 2221  221122344455532  2232221     345677887888888888


Q ss_pred             HcC
Q psy13271         83 ESG   85 (110)
Q Consensus        83 ~sG   85 (110)
                      +.|
T Consensus       356 ~~~  358 (407)
T TIGR03150       356 RDG  358 (407)
T ss_pred             hcC
Confidence            886

FabB sequences should fall well below the noise cutoff of this model.

>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=92.28  E-value=0.65  Score=34.54  Aligned_cols=72  Identities=15%  Similarity=0.027  Sum_probs=44.9

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEe-ecC--CCcchhHHHHHcCCC--CCCeeeEeccchHHHHHHHHHHHHHHcC
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGY-VYG--DSTCGQRALYQIGMT--GIPVFNVNNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~-~~~--~~~~~~~~a~~lg~~--~~~~~~i~~~C~sg~~al~~A~~~i~sG   85 (110)
                      -..+++++||+++|+ ++|||.|.... .++  |......+.+.++..  ....+.=....++|...+..+...|+.|
T Consensus       281 ~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g  357 (398)
T PRK06519        281 DLEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAGPVRGIGTLFGHTMEAQFPLGLALAALSVSKG  357 (398)
T ss_pred             HHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCCCccccchhhccchHHHHHHHHHHHHHHHhcC
Confidence            456799999999999 89999987532 222  221122344555531  1112222356677777777888888888

>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III

Probab=92.16  E-value=0.72  Score=33.87  Aligned_cols=76  Identities=20%  Similarity=0.243  Sum_probs=44.6

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC-CCeeeE----eccchHHHHHHHHHHHHHHcC---
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG-IPVFNV----NNNCSTGSSALMLAKQFIESG---   85 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~-~~~~~i----~~~C~sg~~al~~A~~~i~sG---   85 (110)
                      ..++++++|+++|++++|||.++.....  ...-..+.+.||+.. .....+    ++++++-..+|..+   ++.|   
T Consensus       282 ~~~~i~~~L~~~gl~~~dId~~v~Hq~n--~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~---~~~g~~~  356 (379)
T PLN02326        282 VPQVIESALQKAGLTAESIDWLLLHQAN--QRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEA---VRSGKVK  356 (379)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEECCCC--HHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHH---HHcCCCC
Confidence            3356788899999999999988864331  112245778888853 122233    23444444444444   3443   


Q ss_pred             -CCeEEEEee
Q psy13271         86 -SDCTLALGF   94 (110)
Q Consensus        86 -~~~vlv~g~   94 (110)
                       -|.+|+++.
T Consensus       357 ~Gd~vll~~~  366 (379)
T PLN02326        357 KGDVIATAGF  366 (379)
T ss_pred             CCCEEEEEEE
Confidence             356776654

>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases

Probab=92.09  E-value=0.57  Score=34.40  Aligned_cols=74  Identities=20%  Similarity=0.197  Sum_probs=46.0

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEE-eecCC--CcchhHHHHHcCCC--CCCeee-----EeccchHHHHHHHHHHHH
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCG-YVYGD--STCGQRALYQIGMT--GIPVFN-----VNNNCSTGSSALMLAKQF   81 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~-~~~~~--~~~~~~~a~~lg~~--~~~~~~-----i~~~C~sg~~al~~A~~~   81 (110)
                      +-..++++++|+++|++++|||.|... +.++.  ......+.+.++-.  +.+...     =+...++|...+..+...
T Consensus       274 ~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~  353 (407)
T cd00828         274 KGIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQS  353 (407)
T ss_pred             HHHHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHH
Confidence            456778999999999999999988653 22221  11112233344421  222222     245667777778788888


Q ss_pred             HHcC
Q psy13271         82 IESG   85 (110)
Q Consensus        82 i~sG   85 (110)
                      ++.|
T Consensus       354 l~~~  357 (407)
T cd00828         354 LEHG  357 (407)
T ss_pred             HhcC
Confidence            8887

They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.

>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=91.96  E-value=0.57  Score=34.53  Aligned_cols=74  Identities=16%  Similarity=0.130  Sum_probs=47.1

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEE-eecC--CCcchhHHHHHcCCCCCCeee-----EeccchHHHHHHHHHHHHHHcC
Q psy13271         14 AKEALIKALDDAGISINQVQQACCG-YVYG--DSTCGQRALYQIGMTGIPVFN-----VNNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~-~~~~--~~~~~~~~a~~lg~~~~~~~~-----i~~~C~sg~~al~~A~~~i~sG   85 (110)
                      ..++++++|+++|++++|||.+... +.++  |......+.+.+|-. .|+..     =+..+++|...+..+...++.|
T Consensus       262 ~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~-~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~  340 (392)
T PRK09185        262 AILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDG-VPCSSTKGLTGHTLGAAGAVEAAICWLALRHG  340 (392)
T ss_pred             HHHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCC-CceeCCCcccccChhhcchHHHHHHHHHHhcC
Confidence            3578999999999999999987643 2222  211112344445532 23222     2467778888888888888988


Q ss_pred             -CCe
Q psy13271         86 -SDC   88 (110)
Q Consensus        86 -~~~   88 (110)
                       .--
T Consensus       341 ~ip~  344 (392)
T PRK09185        341 LPPH  344 (392)
T ss_pred             CCCC
Confidence             443

>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II

Probab=91.92  E-value=0.56  Score=36.29  Aligned_cols=72  Identities=19%  Similarity=0.134  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEE-EeecC--CCcchhHHHHHcCCC-CCCeee-----EeccchHHHHHHHHHHHHHHc
Q psy13271         14 AKEALIKALDDAGISINQVQQACC-GYVYG--DSTCGQRALYQIGMT-GIPVFN-----VNNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~-~~~~~--~~~~~~~~a~~lg~~-~~~~~~-----i~~~C~sg~~al~~A~~~i~s   84 (110)
                      ..++++++|+++|++++|||.|-. ++.++  |......+...+|-. ..+...     =...+++|...+..+...|+.
T Consensus       407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~  486 (540)
T PLN02787        407 VILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQNPELRVNSTKSMIGHLLGAAGAVEAIATVQAIRT  486 (540)
T ss_pred             HHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCCCCCceeeCCCCCcCCCcccchHHHHHHHHHHHhc
Confidence            457899999999999999998864 33332  222122344555532 122221     134567777777778888998


Q ss_pred             C
Q psy13271         85 G   85 (110)
Q Consensus        85 G   85 (110)
                      |
T Consensus       487 g  487 (540)
T PLN02787        487 G  487 (540)
T ss_pred             C
Confidence            8

>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=91.86  E-value=0.46  Score=35.01  Aligned_cols=72  Identities=19%  Similarity=0.139  Sum_probs=45.1

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEE-eecC--CCcchhHHHHHcCC--CCCCeee----E-eccchHHHHHHHHHHHHHH
Q psy13271         14 AKEALIKALDDAGISINQVQQACCG-YVYG--DSTCGQRALYQIGM--TGIPVFN----V-NNNCSTGSSALMLAKQFIE   83 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~-~~~~--~~~~~~~~a~~lg~--~~~~~~~----i-~~~C~sg~~al~~A~~~i~   83 (110)
                      ..++++++|+++|++++|||.+-.. +.++  +......+...++.  ...+...    + +..+++|...+..+...++
T Consensus       278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~  357 (411)
T PRK07314        278 AARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIR  357 (411)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHh
Confidence            4578899999999999999998643 2221  11111233444552  1222221    1 3456788888888888888


Q ss_pred             cC
Q psy13271         84 SG   85 (110)
Q Consensus        84 sG   85 (110)
                      .|
T Consensus       358 ~~  359 (411)
T PRK07314        358 DQ  359 (411)
T ss_pred             CC
Confidence            88

>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=91.85  E-value=0.77  Score=34.22  Aligned_cols=73  Identities=16%  Similarity=0.094  Sum_probs=45.8

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEE-EeecC--CCcchhHHHHHcCC---CCCCeeeE-----eccchHHHHHHHHHHHH
Q psy13271         13 LAKEALIKALDDAGISINQVQQACC-GYVYG--DSTCGQRALYQIGM---TGIPVFNV-----NNNCSTGSSALMLAKQF   81 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~-~~~~~--~~~~~~~~a~~lg~---~~~~~~~i-----~~~C~sg~~al~~A~~~   81 (110)
                      -..++++++|+++|++++|||.|-. ++.++  |......+.+.+|-   +..+...+     ....++|...+..+...
T Consensus       279 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~  358 (414)
T PRK08722        279 GGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMS  358 (414)
T ss_pred             HHHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHH
Confidence            4577889999999999999998854 33322  22112234445542   22333222     34567777777777888


Q ss_pred             HHcC
Q psy13271         82 IESG   85 (110)
Q Consensus        82 i~sG   85 (110)
                      ++.|
T Consensus       359 l~~~  362 (414)
T PRK08722        359 LVDQ  362 (414)
T ss_pred             HhcC
Confidence            8888

>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=91.48  E-value=0.76  Score=32.64  Aligned_cols=77  Identities=19%  Similarity=0.208  Sum_probs=45.0

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC-CCeeeE----eccchHHHHHHHHHHHHHHcC-C-
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG-IPVFNV----NNNCSTGSSALMLAKQFIESG-S-   86 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~-~~~~~i----~~~C~sg~~al~~A~~~i~sG-~-   86 (110)
                      ..++++++|+++|++++|||.++.....  ......+.+.+|+.. .....+    +.++++-...|.   .+++.| . 
T Consensus       227 ~~~~i~~~L~~~g~~~~did~~~~h~~~--~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~---~~~~~g~~~  301 (325)
T PRK12879        227 MPKGARQVLEKAGLTKDDIDWVIPHQAN--LRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALD---LALEQGKIK  301 (325)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEECCCC--HHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHH---HHHHcCCCC
Confidence            3467789999999999999999875432  122345677788842 111122    223344444443   344554 3 


Q ss_pred             --CeEEEEeec
Q psy13271         87 --DCTLALGFE   95 (110)
Q Consensus        87 --~~vlv~g~e   95 (110)
                        |.+++++.-
T Consensus       302 ~Gd~vll~~~G  312 (325)
T PRK12879        302 PGDTLLLYGFG  312 (325)
T ss_pred             CCCEEEEEEEc
Confidence              567766643

>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

Probab=91.44  E-value=0.9  Score=34.06  Aligned_cols=73  Identities=15%  Similarity=0.137  Sum_probs=42.4

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEE-EeecCCCcc--hhHHHHHcCCC-------CCCeeeEeccchHHHHHHHHHHHHH
Q psy13271         13 LAKEALIKALDDAGISINQVQQACC-GYVYGDSTC--GQRALYQIGMT-------GIPVFNVNNNCSTGSSALMLAKQFI   82 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~-~~~~~~~~~--~~~~a~~lg~~-------~~~~~~i~~~C~sg~~al~~A~~~i   82 (110)
                      =+.++++.||+++|++++|||.|.. +++++-...  ...+.+.+|-.       ....++=..-.++|..-+..+...+
T Consensus       277 Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vsstKs~tGH~lGAaGaveai~~~l~l  356 (412)
T COG0304         277 GAIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISLLAL  356 (412)
T ss_pred             hHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhcccccCceeeecccccccChhhHHHHHHHHHHHHH
Confidence            3568899999999999999999875 333332211  12334455521       1112222334445555555667777


Q ss_pred             HcC
Q psy13271         83 ESG   85 (110)
Q Consensus        83 ~sG   85 (110)
                      +.|
T Consensus       357 ~~g  359 (412)
T COG0304         357 RDG  359 (412)
T ss_pred             hcC
Confidence            766

>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III

Probab=91.21  E-value=1.1  Score=31.70  Aligned_cols=78  Identities=14%  Similarity=0.099  Sum_probs=46.0

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC-CCeeeE----eccchHHHHHHHHHHHH--HHcCC
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG-IPVFNV----NNNCSTGSSALMLAKQF--IESGS   86 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~-~~~~~i----~~~C~sg~~al~~A~~~--i~sG~   86 (110)
                      ..++++++|+++|++++|||.++....  .......++..||+.. .....+    +.++++-...|..+.+.  ++. -
T Consensus       221 ~~~~~~~~l~~~g~~~~di~~~~~h~~--~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~-G  297 (318)
T TIGR00747       221 MGDVVEETLEANGLDPEDIDWFVPHQA--NLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDELLRTGRIKP-G  297 (318)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEECCC--CHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHHHHcCCCCC-C
Confidence            456788899999999999999986432  2222345677888852 111222    33444445555443331  222 3


Q ss_pred             CeEEEEee
Q psy13271         87 DCTLALGF   94 (110)
Q Consensus        87 ~~vlv~g~   94 (110)
                      |++++++.
T Consensus       298 d~vll~~~  305 (318)
T TIGR00747       298 DLLLLVAF  305 (318)
T ss_pred             CEEEEEEE
Confidence            77777765

Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.

>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems

Probab=91.08  E-value=0.75  Score=32.46  Aligned_cols=43  Identities=16%  Similarity=0.214  Sum_probs=31.2

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCC
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMT   57 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~   57 (110)
                      ...+++.++|+++|++++|||.+++....  ......+.+.+|+.
T Consensus       224 ~~~~~i~~~l~~~g~~~~di~~~~~h~~~--~~~~~~~~~~lgl~  266 (320)
T cd00830         224 LMPESIEEALEKAGLTPDDIDWFVPHQAN--LRIIEAVAKRLGLP  266 (320)
T ss_pred             hhHHHHHHHHHHcCCCHHHCCEEEECCCC--HHHHHHHHHHhCCC
Confidence            45678889999999999999998875432  12234567778884

It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.

>PRK05790 putative acyltransferase; Provisional

Probab=91.07  E-value=1.3  Score=32.74  Aligned_cols=76  Identities=18%  Similarity=0.168  Sum_probs=47.8

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH--HHHHcCCCCCCee------eE-eccchHHHHHHHHHHHHHHc
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQR--ALYQIGMTGIPVF------NV-NNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~--~a~~lg~~~~~~~------~i-~~~C~sg~~al~~A~~~i~s   84 (110)
                      ...+++++|+++|++++|||.+-+.    +.+....  ..+.||+...|..      .. ....++|..-+..+...++.
T Consensus       293 ~~~a~~~a~~~Agi~~~did~~e~~----d~f~~~~l~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~  368 (393)
T PRK05790        293 PVPAIRKALEKAGWSLADLDLIEIN----EAFAAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHEMKR  368 (393)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEeC----cHHHHHHHHHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHh
Confidence            4578999999999999999998642    2222222  2345665321211      11 34566777777777788876


Q ss_pred             C-CCeEEEEe
Q psy13271         85 G-SDCTLALG   93 (110)
Q Consensus        85 G-~~~vlv~g   93 (110)
                      . .++.|+-.
T Consensus       369 ~~~~~gl~~~  378 (393)
T PRK05790        369 RGAKKGLATL  378 (393)
T ss_pred             cCCCeEEEEE
Confidence            5 77666543

>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional

Probab=90.91  E-value=1  Score=33.56  Aligned_cols=74  Identities=18%  Similarity=0.073  Sum_probs=46.7

Q ss_pred             HHHHHHHHHHHHH-cCCCccccCeEEEE-eecC--CCcchhHHHHHcCCC---CCCeee-----EeccchHHHHHHHHHH
Q psy13271         12 ELAKEALIKALDD-AGISINQVQQACCG-YVYG--DSTCGQRALYQIGMT---GIPVFN-----VNNNCSTGSSALMLAK   79 (110)
Q Consensus        12 ~l~~~a~~~al~~-agl~~~~id~vi~~-~~~~--~~~~~~~~a~~lg~~---~~~~~~-----i~~~C~sg~~al~~A~   79 (110)
                      .-..++++++|++ +|++++|||.|-.. +.++  +......+.+.+|-.   ..+...     =....++|...+..+.
T Consensus       283 ~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~  362 (421)
T PTZ00050        283 RGARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTI  362 (421)
T ss_pred             HHHHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHH
Confidence            3456789999999 99999999988653 2221  111112344445531   222211     2356678888888888


Q ss_pred             HHHHcC
Q psy13271         80 QFIESG   85 (110)
Q Consensus        80 ~~i~sG   85 (110)
                      ..++.|
T Consensus       363 l~l~~~  368 (421)
T PTZ00050        363 LSLYEQ  368 (421)
T ss_pred             HHHHcC
Confidence            889888

>PRK09050 beta-ketoadipyl CoA thiolase; Validated

Probab=90.87  E-value=1.6  Score=32.54  Aligned_cols=74  Identities=20%  Similarity=0.215  Sum_probs=43.6

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH--HHHHcCCC--CCCeeeEe-------ccchHHHHHHHHHHHHH
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQR--ALYQIGMT--GIPVFNVN-------NNCSTGSSALMLAKQFI   82 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~--~a~~lg~~--~~~~~~i~-------~~C~sg~~al~~A~~~i   82 (110)
                      ...+++++|+++|++++|||.+-+.    +.+....  ..+.||+.  ..|.....       ...++|...+..+...+
T Consensus       299 ~~~a~~~al~~Agl~~~DId~~ei~----D~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qL  374 (401)
T PRK09050        299 PAPATRKLLARLGLTIDQFDVIELN----EAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQL  374 (401)
T ss_pred             HHHHHHHHHHHcCCCHHHCCccccC----cHhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHH
Confidence            3578999999999999999988643    2222222  23567872  22322221       12344555666666666


Q ss_pred             HcC-CCeEEE
Q psy13271         83 ESG-SDCTLA   91 (110)
Q Consensus        83 ~sG-~~~vlv   91 (110)
                      +.. ..+.|+
T Consensus       375 r~~~~~~g~~  384 (401)
T PRK09050        375 ERTGGRYALC  384 (401)
T ss_pred             HhcCCCeEEE
Confidence            655 555554

>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases

Probab=90.86  E-value=1.1  Score=32.97  Aligned_cols=75  Identities=19%  Similarity=0.155  Sum_probs=47.7

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH--HHHHcCCCCCCee------e-EeccchHHHHHHHHHHHHHHc
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQR--ALYQIGMTGIPVF------N-VNNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~--~a~~lg~~~~~~~------~-i~~~C~sg~~al~~A~~~i~s   84 (110)
                      ..++++++|+++|++++|||.+-+-.    .+....  ..+.||+...|..      . =....++|+..+..+...++.
T Consensus       288 ~~~a~~~a~~~Agi~~~did~~e~~d----~fa~~~~~~~e~lG~~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g  363 (386)
T TIGR01930       288 PVPAIPKALKKAGLSISDIDLFEINE----AFAAQVLACIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTLLHELKR  363 (386)
T ss_pred             HHHHHHHHHHHcCCCHHHCCeeehcc----hhHHHHHHHHHHhCCChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHh
Confidence            35899999999999999999884432    221111  2245665221211      1 123456677788888888887


Q ss_pred             C-CCeEEEE
Q psy13271         85 G-SDCTLAL   92 (110)
Q Consensus        85 G-~~~vlv~   92 (110)
                      . .++.|+-
T Consensus       364 ~~~~~gl~~  372 (386)
T TIGR01930       364 RGGRYGLAT  372 (386)
T ss_pred             cCCCEEEEE
Confidence            6 8888874

This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt

>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=90.82  E-value=0.79  Score=31.33  Aligned_cols=57  Identities=18%  Similarity=0.244  Sum_probs=38.6

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchh----HHHHHcCC-CCCCeeeEe
Q psy13271          8 TDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQ----RALYQIGM-TGIPVFNVN   65 (110)
Q Consensus         8 ~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~----~~a~~lg~-~~~~~~~i~   65 (110)
                      ..-.+.....+.++|.+++++.+|+|.|+++..-|.+ .+-    .+++-|.+ .++|.+.++
T Consensus        35 r~hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSF-TGlRIG~~~AkgLA~~l~iplvgvs   96 (220)
T COG1214          35 RNHAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSF-TGLRIGVAFAKGLALALNIPLVGVS   96 (220)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcc-cchhhHHHHHHHHHHHcCCCEEEeC
Confidence            4456778888999999999999999999997654333 332    23333332 245777664

>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated

Probab=90.62  E-value=1.3  Score=32.79  Aligned_cols=71  Identities=10%  Similarity=0.014  Sum_probs=42.6

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEE-eecCCCcchhHHHHHcC--CCCCCeeeE-----eccchHHHHHHHHHHHHHHcC
Q psy13271         14 AKEALIKALDDAGISINQVQQACCG-YVYGDSTCGQRALYQIG--MTGIPVFNV-----NNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~-~~~~~~~~~~~~a~~lg--~~~~~~~~i-----~~~C~sg~~al~~A~~~i~sG   85 (110)
                      ..++++++|+++|++++|||.|... +.++ ..........++  ..+.|...+     ....++|...+..+...++.|
T Consensus       283 ~~~a~~~Al~~Agi~~~dId~v~~hgtgt~-~~D~~E~~al~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~  361 (410)
T PRK07103        283 EMRVIRAALRRAGLGPEDIDYVNPHGTGSP-LGDETELAALFASGLAHAWINATKSLTGHGLSAAGIVELIATLLQMRAG  361 (410)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEccCCCCC-CCCHHHHHHHhcCCCCCCeEECCCcccccCchhhhHHHHHHHHHHHhCC
Confidence            3578999999999999999987643 2222 111211111122  222332221     345667777787788888888

>PLN02287 3-ketoacyl-CoA thiolase

Probab=90.61  E-value=1.6  Score=33.04  Aligned_cols=74  Identities=12%  Similarity=0.148  Sum_probs=44.1

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHH--HHcCCCCCCee------eE-eccchHHHHHHHHHHHHHHc
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRAL--YQIGMTGIPVF------NV-NNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a--~~lg~~~~~~~------~i-~~~C~sg~~al~~A~~~i~s   84 (110)
                      ...+++++|+++|++++|||.+=+.    +.+....+.  +.||+...|..      .. +...+||..-+..+...++.
T Consensus       333 ~~~A~~~al~~Agl~~~DID~~Ei~----daFa~~~l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~  408 (452)
T PLN02287        333 PAVAIPAAVKAAGLELDDIDLFEIN----EAFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKR  408 (452)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEec----chHHHHHHHHHHHcCCCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHh
Confidence            4689999999999999999988432    333333333  45776422211      11 23345666666666666654


Q ss_pred             C-C--CeEEE
Q psy13271         85 G-S--DCTLA   91 (110)
Q Consensus        85 G-~--~~vlv   91 (110)
                      . .  ++.|+
T Consensus       409 ~~~~~~~gl~  418 (452)
T PLN02287        409 RGKDCRFGVV  418 (452)
T ss_pred             cCCCCCeeEE
Confidence            3 5  66553

>PRK09051 beta-ketothiolase; Provisional

Probab=90.46  E-value=2.3  Score=31.60  Aligned_cols=74  Identities=18%  Similarity=0.183  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH--HHHHcCCCCCCeee------E-eccchHHHHHHHHHHHHHHc
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQR--ALYQIGMTGIPVFN------V-NNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~--~a~~lg~~~~~~~~------i-~~~C~sg~~al~~A~~~i~s   84 (110)
                      ...|++++|+++|++++|||.+=+.    +.+....  ..+.||+...|...      . +...++|..-+..+...++.
T Consensus       294 ~~~a~~~al~~agi~~~did~~ei~----d~f~~~~~~~~e~lg~~~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~  369 (394)
T PRK09051        294 PVPATQKALERAGLTVADLDVIEAN----EAFAAQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALYELQR  369 (394)
T ss_pred             HHHHHHHHHHHcCCCHHHcCEEEec----CccHHHHHHHHHHhCCCccccCCCccHHHhcchHHHHHHHHHHHHHHHHHh
Confidence            4678899999999999999988653    2222222  23557764222111      1 23355666666666666664


Q ss_pred             C-CCeEEE
Q psy13271         85 G-SDCTLA   91 (110)
Q Consensus        85 G-~~~vlv   91 (110)
                      . .++.|+
T Consensus       370 ~~~~~g~~  377 (394)
T PRK09051        370 IGGRYALV  377 (394)
T ss_pred             cCCCEEEE
Confidence            4 555543

>PRK09052 acetyl-CoA acetyltransferase; Provisional

Probab=90.44  E-value=2  Score=31.98  Aligned_cols=25  Identities=24%  Similarity=0.205  Sum_probs=21.8

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEE
Q psy13271         13 LAKEALIKALDDAGISINQVQQACC   37 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~   37 (110)
                      -...|++++|+++|++++|||.+-+
T Consensus       298 ~~~~A~~~al~~Agi~~~did~~ei  322 (399)
T PRK09052        298 GPIEAIPAALKQAGLKQDDLDWIEL  322 (399)
T ss_pred             hHHHHHHHHHHHcCCCHHHcCEEEe
Confidence            3468999999999999999999864

>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional

Probab=90.44  E-value=0.95  Score=32.99  Aligned_cols=75  Identities=17%  Similarity=0.084  Sum_probs=43.5

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEE-eecC--CCcchhHHHHHcCCC-CCCeeeE-----eccchHHHHHHHHHHHH
Q psy13271         11 PELAKEALIKALDDAGISINQVQQACCG-YVYG--DSTCGQRALYQIGMT-GIPVFNV-----NNNCSTGSSALMLAKQF   81 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id~vi~~-~~~~--~~~~~~~~a~~lg~~-~~~~~~i-----~~~C~sg~~al~~A~~~   81 (110)
                      .+-..++++++|+++|++++|||.|-.- +.++  |......+.+.+|-. ..|...+     ..-.++|...+..+...
T Consensus       205 ~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~  284 (342)
T PRK14691        205 GDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGESNALAITSTKSATGHLLGAAGGLETIFTVLA  284 (342)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCCCCCceEECCcccccCCcchhhHHHHHHHHHH
Confidence            3456788999999999999999987543 2222  221122344556532 2232222     22345555555555667


Q ss_pred             HHcC
Q psy13271         82 IESG   85 (110)
Q Consensus        82 i~sG   85 (110)
                      ++.|
T Consensus       285 l~~~  288 (342)
T PRK14691        285 LRDQ  288 (342)
T ss_pred             HhCC
Confidence            7877

>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1

Probab=90.32  E-value=1.6  Score=27.00  Aligned_cols=45  Identities=18%  Similarity=0.236  Sum_probs=32.6

Q ss_pred             HHHHHHHcCCCccccCeEEEEeecCCC--cchhHHHHHc-CCCCCCeee
Q psy13271         18 LIKALDDAGISINQVQQACCGYVYGDS--TCGQRALYQI-GMTGIPVFN   63 (110)
Q Consensus        18 ~~~al~~agl~~~~id~vi~~~~~~~~--~~~~~~a~~l-g~~~~~~~~   63 (110)
                      ..+.+++.+++++||-.+++. .++|.  .+|+.+++.+ |+..+|.+.
T Consensus        26 l~~ii~~N~l~~edivSv~FT-~T~DL~a~FPA~aaR~~~Gw~~Vplmc   73 (117)
T TIGR01796        26 LTELMERNELTPEDLISVIFT-VTEDLHADFPAAAARGLPGWTDVPVMC   73 (117)
T ss_pred             HHHHHHHcCCCHHHEEEEEEE-ecCcccccChHHHHHhccCCCCcceec
Confidence            345567789999999888874 44443  3577888888 998777654

This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).

>PRK13359 beta-ketoadipyl CoA thiolase; Provisional

Probab=90.18  E-value=1.9  Score=32.07  Aligned_cols=74  Identities=18%  Similarity=0.181  Sum_probs=43.8

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHH--HHHcCCC--CCCeeeEe-------ccchHHHHHHHHHHHHH
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRA--LYQIGMT--GIPVFNVN-------NNCSTGSSALMLAKQFI   82 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~--a~~lg~~--~~~~~~i~-------~~C~sg~~al~~A~~~i   82 (110)
                      ...|++++|+++|++++|||.+-+.    +.+....+  .+.||+.  ..|.....       ...++|..-+..+...+
T Consensus       298 ~~~A~~~al~~AGl~~~DID~iei~----dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL  373 (400)
T PRK13359        298 PAPATQKLLARLGMTLDQFDVIELN----EAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQL  373 (400)
T ss_pred             HHHHHHHHHHHhCCCHHHcCcCccC----cHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHH
Confidence            3688999999999999999988642    33322232  3557772  22222111       12345666666666666


Q ss_pred             HcC-CCeEEE
Q psy13271         83 ESG-SDCTLA   91 (110)
Q Consensus        83 ~sG-~~~vlv   91 (110)
                      +.. .++.|+
T Consensus       374 ~~~~~~~g~~  383 (400)
T PRK13359        374 ERTGGRFALC  383 (400)
T ss_pred             hhcCCCeEEE
Confidence            654 555554

>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2

Probab=90.14  E-value=2.2  Score=26.61  Aligned_cols=74  Identities=16%  Similarity=0.198  Sum_probs=38.6

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHH--HHHcCCCCCC------eeeE-eccchHHHHHHHHHHHHHHc
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRA--LYQIGMTGIP------VFNV-NNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~--a~~lg~~~~~------~~~i-~~~C~sg~~al~~A~~~i~s   84 (110)
                      ...|++++|+++|++++|||.+=+.    +.+..+.+  .+.+|+...+      .... ....+||..-+......++.
T Consensus        24 p~~A~~~al~~ag~~~~did~~Ei~----EaFA~~~l~~~~~lg~~~~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~~   99 (123)
T PF02803_consen   24 PVPAARKALERAGLTPDDIDVIEIN----EAFAAQVLAFLEALGLDPEKVNPNGGALALGHPLGASGARLVVELAHQLRR   99 (123)
T ss_dssp             HHHHHHHHHHHHT--GGGESEEEE------SBHHHHHHHHHHHTTGGGGBSTT--HHHH-BHTTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCccccchhhcc----chhhhHHHHhhccccccccccCcccccccccccccccccchhhhhHHHHHH
Confidence            3578999999999999999988653    33333332  3456663211      1111 12233455555455555444


Q ss_pred             C-CCeEEE
Q psy13271         85 G-SDCTLA   91 (110)
Q Consensus        85 G-~~~vlv   91 (110)
                      . .++.++
T Consensus       100 ~~~~~gla  107 (123)
T PF02803_consen  100 RGGRYGLA  107 (123)
T ss_dssp             HTTSEEEE
T ss_pred             hchhhhhH
Confidence            4 555554

3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....

>PRK06690 acetyl-CoA acetyltransferase; Provisional

Probab=90.12  E-value=1.9  Score=31.70  Aligned_cols=26  Identities=12%  Similarity=0.075  Sum_probs=22.4

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEE
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCG   38 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~   38 (110)
                      -...+++++|+++|++++|||.+.+.
T Consensus       259 ~~~~a~~~al~~Agl~~~Did~~ei~  284 (361)
T PRK06690        259 GPIFAVNKLLNEMNMKVEDIDYFEIN  284 (361)
T ss_pred             HHHHHHHHHHHHcCCCHHHcCEeeec
Confidence            45678899999999999999998663

>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase

Probab=89.92  E-value=1.6  Score=32.66  Aligned_cols=74  Identities=18%  Similarity=0.152  Sum_probs=42.9

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEE-eecC--CCcchhHHHHHcCCC----CCCeeeE-----eccchHHHHHHHHHH
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCG-YVYG--DSTCGQRALYQIGMT----GIPVFNV-----NNNCSTGSSALMLAK   79 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~-~~~~--~~~~~~~~a~~lg~~----~~~~~~i-----~~~C~sg~~al~~A~   79 (110)
                      +-..++++++|+++|++++|||.|-.. +.++  +......+...+|-.    +.+...+     +...++|+..+..+.
T Consensus       299 ~~~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~  378 (437)
T PLN02836        299 RGAVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKGATGHLLGAAGAVEAIFSV  378 (437)
T ss_pred             HHHHHHHHHHHHHcCCCHhHcCEEEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeECCcccccccHHHHHHHHHHHHH
Confidence            345678999999999999999988643 2221  111112233334321    1222211     234556666666777


Q ss_pred             HHHHcC
Q psy13271         80 QFIESG   85 (110)
Q Consensus        80 ~~i~sG   85 (110)
                      ..++.|
T Consensus       379 l~l~~~  384 (437)
T PLN02836        379 LAIHHG  384 (437)
T ss_pred             HHHhcC
Confidence            788888

>PRK07937 lipid-transfer protein; Provisional

Probab=89.77  E-value=3.5  Score=30.22  Aligned_cols=74  Identities=19%  Similarity=0.071  Sum_probs=45.6

Q ss_pred             HHHHHHHH-cCCCccccCeEEEEeecCCCcchhH--HHHHcCCCC-CCeeeE------eccchHHHHHHHHHHHHHHcC-
Q psy13271         17 ALIKALDD-AGISINQVQQACCGYVYGDSTCGQR--ALYQIGMTG-IPVFNV------NNNCSTGSSALMLAKQFIESG-   85 (110)
Q Consensus        17 a~~~al~~-agl~~~~id~vi~~~~~~~~~~~~~--~a~~lg~~~-~~~~~i------~~~C~sg~~al~~A~~~i~sG-   85 (110)
                      ++++++++ +|++++|||.+=+-.    .+....  ..+.||+.+ .|...-      +...++|+.-+..+...++.+ 
T Consensus       251 ~~~~a~~~aAgi~~~diD~~Ei~D----~F~~~~l~~~e~lGl~g~~pvN~~GG~l~ghp~gatG~~~~~e~~~QL~g~~  326 (352)
T PRK07937        251 STALAAEAATGGDAGGVDVAELHA----PFTHQELILREALGLGDKTKVNPSGGALAANPMFAAGLERIGEAARHIWDGS  326 (352)
T ss_pred             HHHHHHHHhcCCCHHHCCEEEEeC----CChHHHHHHHHHcCCCCCCCcCCCccchhcCchhHHHHHHHHHHHHHHhccC
Confidence            34455555 599999999885532    222222  235677633 222211      122346788888888899988 


Q ss_pred             CCeEEEEee
Q psy13271         86 SDCTLALGF   94 (110)
Q Consensus        86 ~~~vlv~g~   94 (110)
                      ++++|+.+.
T Consensus       327 a~~~l~~~~  335 (352)
T PRK07937        327 ARRALAHAT  335 (352)
T ss_pred             CCEEEEecc
Confidence            999998763

>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=89.56  E-value=1.2  Score=32.96  Aligned_cols=74  Identities=20%  Similarity=0.166  Sum_probs=44.5

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEE-eecC--CCcchhHHHHHcCC-CCCCeeeE-----eccchHHHHHHHHHHHHH
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCG-YVYG--DSTCGQRALYQIGM-TGIPVFNV-----NNNCSTGSSALMLAKQFI   82 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~-~~~~--~~~~~~~~a~~lg~-~~~~~~~i-----~~~C~sg~~al~~A~~~i   82 (110)
                      +-..++++++|+++|++++|||.|-.. +.++  |......+...+|- .+.+...+     ....++|...+..+...+
T Consensus       288 ~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg~~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l  367 (424)
T PRK06333        288 EGARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFGHVSGLAVSSTKSATGHLLGAAGGVEAIFTILAL  367 (424)
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhCCCCCceeECcccchhhhHHHHHHHHHHHHHHHH
Confidence            346788999999999999999998643 2222  11111234445552 12222211     234566666677777888


Q ss_pred             HcC
Q psy13271         83 ESG   85 (110)
Q Consensus        83 ~sG   85 (110)
                      +.|
T Consensus       368 ~~g  370 (424)
T PRK06333        368 RDQ  370 (424)
T ss_pred             hcC
Confidence            887

>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14

Probab=89.40  E-value=0.48  Score=34.99  Aligned_cols=35  Identities=23%  Similarity=0.337  Sum_probs=30.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEee
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYV   40 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~   40 (110)
                      ..++..+|..+...+++++++++.+|+|.|+-++.
T Consensus        61 tresV~elV~dtl~e~~k~A~l~i~DL~FVVRSTG   95 (445)
T TIGR03285        61 TRESVAELVKDTLKESLKKAGLDIDDLDFVVRSTG   95 (445)
T ss_pred             cHHHHHHHHHHHHHHHHHHcCCChhhccEEEeccc
Confidence            55778899999999999999999999999887653

Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.

>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5

Probab=89.38  E-value=2.5  Score=26.23  Aligned_cols=48  Identities=19%  Similarity=0.234  Sum_probs=30.7

Q ss_pred             HHHHHHHHHcCCCccccCeEEEEeecCCC--cchhHHHHHc-CCCCCCeeeE
Q psy13271         16 EALIKALDDAGISINQVQQACCGYVYGDS--TCGQRALYQI-GMTGIPVFNV   64 (110)
Q Consensus        16 ~a~~~al~~agl~~~~id~vi~~~~~~~~--~~~~~~a~~l-g~~~~~~~~i   64 (110)
                      +-..+.+++.+++++||-.+++. .++|.  ..|+..++.+ |+..+|.+..
T Consensus        24 eLl~~i~~~N~l~~~dIvSi~FT-~T~DL~a~fPA~a~R~~~g~~~Vpl~c~   74 (118)
T PF07736_consen   24 ELLEEILERNELSPEDIVSIIFT-VTPDLDAAFPAAAARELPGWDDVPLMCA   74 (118)
T ss_dssp             HHHHHHHHHTT--GGGEEEEEEE-E-TT--SS-TCHHHHHTTTGTTSEEEEE
T ss_pred             HHHHHHHHHcCCCHHHEEEEEEE-eCCCcCccChHHHHHccCCCCccceecc
Confidence            33455667889999999988874 44554  3577888887 8887776543

4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....

>TIGR02430 pcaF beta-ketoadipyl CoA thiolase

Probab=89.34  E-value=1.8  Score=32.20  Aligned_cols=74  Identities=22%  Similarity=0.247  Sum_probs=42.7

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH--HHHHcCCC--CCCeeeEe-------ccchHHHHHHHHHHHHH
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQR--ALYQIGMT--GIPVFNVN-------NNCSTGSSALMLAKQFI   82 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~--~a~~lg~~--~~~~~~i~-------~~C~sg~~al~~A~~~i   82 (110)
                      ...+++++|+++|++++|||.+-+.    +.+....  ..+.||+.  +.|.....       ...++|...+..+...+
T Consensus       298 ~~~a~~~al~~Agl~~~DID~~ei~----D~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qL  373 (400)
T TIGR02430       298 PVPATQKLLARAGLSIDQFDVIELN----EAFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQL  373 (400)
T ss_pred             HHHHHHHHHHHhCCCHHHCCCcccC----cHHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHH
Confidence            3578899999999999999988642    3332222  23567873  22222111       11345555555566666


Q ss_pred             HcC-CCeEEE
Q psy13271         83 ESG-SDCTLA   91 (110)
Q Consensus        83 ~sG-~~~vlv   91 (110)
                      +.. .++.|+
T Consensus       374 r~~~~~~g~~  383 (400)
T TIGR02430       374 ERSGGRYALC  383 (400)
T ss_pred             HhcCCCEEEE
Confidence            544 555543

Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.

>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=89.23  E-value=1.7  Score=32.26  Aligned_cols=73  Identities=19%  Similarity=0.277  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEE-EeecC--CCcchhHHHHHcCCCCCCeeeE-----eccchHHHHHHHHHHHHHH
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACC-GYVYG--DSTCGQRALYQIGMTGIPVFNV-----NNNCSTGSSALMLAKQFIE   83 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~-~~~~~--~~~~~~~~a~~lg~~~~~~~~i-----~~~C~sg~~al~~A~~~i~   83 (110)
                      +-..++++++|++++++++|||.|.. ++.++  |......+...+|- ..|...+     ...+++|..-+..+...++
T Consensus       275 ~~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg~-~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~  353 (405)
T PRK09116        275 ETMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFGA-RMPISSLKSYFGHTLGACGALEAWMSIEMMN  353 (405)
T ss_pred             HHHHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhCC-CCeeECcchhhcccHHHHHHHHHHHHHHHHH
Confidence            34468889999999999999998864 33332  22222234455552 2233222     2335566666666777888


Q ss_pred             cC
Q psy13271         84 SG   85 (110)
Q Consensus        84 sG   85 (110)
                      .|
T Consensus       354 ~~  355 (405)
T PRK09116        354 EG  355 (405)
T ss_pred             cC
Confidence            87

>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=89.12  E-value=1.2  Score=33.30  Aligned_cols=76  Identities=20%  Similarity=0.144  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEE-eecCCC--cchhHHHHHcCCC--CCCeeeE-----eccchHHHHHHHHHHHHH
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCG-YVYGDS--TCGQRALYQIGMT--GIPVFNV-----NNNCSTGSSALMLAKQFI   82 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~-~~~~~~--~~~~~~a~~lg~~--~~~~~~i-----~~~C~sg~~al~~A~~~i   82 (110)
                      -..++++++|+++|++++|||.+..- +.++..  .....+...+|-.  ..|...+     ....++|...+..+...+
T Consensus       290 ~~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l  369 (425)
T PRK06501        290 PAIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTI  369 (425)
T ss_pred             HHHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHHHH
Confidence            35678999999999999999998753 222211  1111233344421  1222211     344667777777778888


Q ss_pred             HcC-CCe
Q psy13271         83 ESG-SDC   88 (110)
Q Consensus        83 ~sG-~~~   88 (110)
                      +.| .--
T Consensus       370 ~~~~ipp  376 (425)
T PRK06501        370 QTGRLPP  376 (425)
T ss_pred             hcCcCCC
Confidence            888 443

>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations

Probab=88.91  E-value=1.7  Score=31.85  Aligned_cols=79  Identities=11%  Similarity=0.004  Sum_probs=47.9

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEe-ecCC--CcchhHHHHHcCCC-----CCCe-----eeEeccchHHHHHHHH
Q psy13271         11 PELAKEALIKALDDAGISINQVQQACCGY-VYGD--STCGQRALYQIGMT-----GIPV-----FNVNNNCSTGSSALML   77 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id~vi~~~-~~~~--~~~~~~~a~~lg~~-----~~~~-----~~i~~~C~sg~~al~~   77 (110)
                      .+-..++++++|+++|++++|||.+.... .+..  ......+...++-.     ..+.     ..-....++|...+..
T Consensus       278 ~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~  357 (421)
T cd00833         278 GEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIK  357 (421)
T ss_pred             HHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHH
Confidence            44556899999999999999999886533 2221  11112233333221     1111     1123456777888888


Q ss_pred             HHHHHHcC-CCeE
Q psy13271         78 AKQFIESG-SDCT   89 (110)
Q Consensus        78 A~~~i~sG-~~~v   89 (110)
                      +...++.| ..-.
T Consensus       358 ~~~~l~~~~ip~~  370 (421)
T cd00833         358 VVLALEHGVIPPN  370 (421)
T ss_pred             HHHHHhcCCcCCc
Confidence            88889988 5443

PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.

>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=88.90  E-value=1.6  Score=30.91  Aligned_cols=77  Identities=19%  Similarity=0.206  Sum_probs=44.3

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCCCee-eE----eccchHHHHHHHHHHHHHHcC---
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVF-NV----NNNCSTGSSALMLAKQFIESG---   85 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~~~-~i----~~~C~sg~~al~~A~~~i~sG---   85 (110)
                      ..++++++|+++|++++|||.++.....  ...-..++..+|++.-... .+    +.++++-...|.   ++++.|   
T Consensus       221 ~~~~i~~~l~~~g~~~~di~~~~~h~~~--~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~---~~~~~g~~~  295 (319)
T PRK09352        221 LAKVAREALEAAGLTPEDIDWLVPHQAN--LRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALD---EAVRDGRIK  295 (319)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEECCCC--HHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHH---HHHHcCCCC
Confidence            4567888999999999999998874321  1122356677787521111 12    233344444443   344443   


Q ss_pred             -CCeEEEEeec
Q psy13271         86 -SDCTLALGFE   95 (110)
Q Consensus        86 -~~~vlv~g~e   95 (110)
                       -|.+++++.-
T Consensus       296 ~Gd~vll~s~G  306 (319)
T PRK09352        296 RGDLVLLEGFG  306 (319)
T ss_pred             CCCEEEEEEEc
Confidence             3677776653

>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

Probab=88.74  E-value=3.6  Score=29.09  Aligned_cols=75  Identities=17%  Similarity=0.013  Sum_probs=45.6

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchh---HHHHHcCCCCCCee----eE-eccchHHHHHHHHHHHHH
Q psy13271         11 PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQ---RALYQIGMTGIPVF----NV-NNNCSTGSSALMLAKQFI   82 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~---~~a~~lg~~~~~~~----~i-~~~C~sg~~al~~A~~~i   82 (110)
                      .+...++++++|+++|++++|||.++............   .....++..+.+..    .+ +..++++...+..+....
T Consensus       204 ~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~  283 (332)
T cd00825         204 AEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLML  283 (332)
T ss_pred             HHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHH
Confidence            34566789999999999999999988755432221111   11122332111111    22 467778888888887777


Q ss_pred             HcC
Q psy13271         83 ESG   85 (110)
Q Consensus        83 ~sG   85 (110)
                      +.+
T Consensus       284 ~~~  286 (332)
T cd00825         284 EHG  286 (332)
T ss_pred             hcC
Confidence            766

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).

>smart00825 PKS_KS Beta-ketoacyl synthase

Probab=88.66  E-value=1.5  Score=32.43  Aligned_cols=79  Identities=15%  Similarity=0.086  Sum_probs=47.5

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEE-eecC--CCcchhHHHHHcCCC-----CCCeeeE-----eccchHHHHHHHH
Q psy13271         11 PELAKEALIKALDDAGISINQVQQACCG-YVYG--DSTCGQRALYQIGMT-----GIPVFNV-----NNNCSTGSSALML   77 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id~vi~~-~~~~--~~~~~~~~a~~lg~~-----~~~~~~i-----~~~C~sg~~al~~   77 (110)
                      ......+++++|+++|+.++|||.+... +.+.  +......+...+|..     ..+...+     ....++|+..+..
T Consensus       278 ~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~  357 (424)
T smart00825      278 GPAQARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIK  357 (424)
T ss_pred             HHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHHH
Confidence            3455678999999999999999988654 3322  111112333444421     1122111     3446677777877


Q ss_pred             HHHHHHcC-CCeE
Q psy13271         78 AKQFIESG-SDCT   89 (110)
Q Consensus        78 A~~~i~sG-~~~v   89 (110)
                      +...++.| ..-.
T Consensus       358 ~~~~l~~~~ip~~  370 (424)
T smart00825      358 VVLALRHGTIPPT  370 (424)
T ss_pred             HHHHHhCCCCCCC
Confidence            88888888 5443

The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.

>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=87.76  E-value=2.6  Score=30.97  Aligned_cols=75  Identities=17%  Similarity=0.236  Sum_probs=45.1

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH--HHHHcCCCCCCee------eE-eccchHHHHHHHHHHHHHHc
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQR--ALYQIGMTGIPVF------NV-NNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~--~a~~lg~~~~~~~------~i-~~~C~sg~~al~~A~~~i~s   84 (110)
                      ...+++++|+++|++++|||.+-+-    +.+....  ..+.||+...|..      .. +...++|+..+..+...++-
T Consensus       287 ~~~a~~~a~~~Agi~~~did~~e~~----d~f~~~~~~~~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g  362 (386)
T cd00751         287 PVPAIPKALKRAGLTLDDIDLIEIN----EAFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKR  362 (386)
T ss_pred             HHHHHHHHHHHcCCCHHHcCEEEee----chhHHHHHHHHHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHh
Confidence            3578999999999999999987653    2222222  2345665321211      11 23445666677677777775


Q ss_pred             C-CCeEEEE
Q psy13271         85 G-SDCTLAL   92 (110)
Q Consensus        85 G-~~~vlv~   92 (110)
                      . .++.|+.
T Consensus       363 ~~~~~gl~~  371 (386)
T cd00751         363 RGGRYGLAT  371 (386)
T ss_pred             cCCCEEEEE
Confidence            4 6666543

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]

Probab=87.64  E-value=0.9  Score=32.97  Aligned_cols=45  Identities=11%  Similarity=0.139  Sum_probs=32.6

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCC
Q psy13271         11 PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMT   57 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~   57 (110)
                      ..+..++++++|++++++++|||.++....  ....-..+++.+|++
T Consensus       222 v~~~~~~~~~~L~~~~l~~~dId~~vpHQa--n~ri~~~i~~~l~~~  266 (323)
T COG0332         222 VRAMPKAIEEVLEKAGLTPEDIDWFVPHQA--NLRIIEAIAKKLGIP  266 (323)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEccccc--cHHHHHHHHHHcCCC
Confidence            346677889999999999999999986432  112234567888884

>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=87.43  E-value=1.4  Score=30.89  Aligned_cols=55  Identities=20%  Similarity=0.257  Sum_probs=33.7

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchh----HHHHHcCC-CCCCeeeEec
Q psy13271         11 PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQ----RALYQIGM-TGIPVFNVNN   66 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~----~~a~~lg~-~~~~~~~i~~   66 (110)
                      .+.....++++|++++++++|||.|.++..- +.+.+-    ..++.|.+ .++|.+.++.
T Consensus        30 ~~~L~~~i~~~l~~~~~~~~did~iavt~GP-GsftgLrvG~~~Ak~La~~~~~Pli~v~~   89 (268)
T PF00814_consen   30 SENLPPLIEELLKEAGISLSDIDAIAVTRGP-GSFTGLRVGLSFAKGLALALNIPLIGVSH   89 (268)
T ss_dssp             HHHHHHHHHHHHHHHTS-GGGESEEEEEEES-S-HHHHHHHHHHHHHHHHHTT--EEEEEH
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEEecCC-CcccccHHHHHHHHHHHHHhCCCeEeecc
Confidence            4566778899999999999999999987653 333232    22333222 2457777753

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....

>PRK06205 acetyl-CoA acetyltransferase; Provisional

Probab=87.26  E-value=4  Score=30.37  Aligned_cols=74  Identities=20%  Similarity=0.187  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHH--HHHcCCCC---CCeeeE--------eccchHHHHHHHHHHH
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRA--LYQIGMTG---IPVFNV--------NNNCSTGSSALMLAKQ   80 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~--a~~lg~~~---~~~~~i--------~~~C~sg~~al~~A~~   80 (110)
                      ...|++++|+++|++++|||.+-+..    .+....+  .+.||+..   .+ +.+        +...++|..-+..+..
T Consensus       300 ~~~a~~~al~~Agl~~~Did~~ei~d----~f~~~~l~~~e~lg~~~~~~~~-vN~~GG~la~Ghp~gatG~~~v~e~~~  374 (404)
T PRK06205        300 PVPATEKALARAGLTLDDIDLIELNE----AFAAQVLAVLKEWGFGADDEER-LNVNGSGISLGHPVGATGGRILATLLR  374 (404)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEeeecc----HHHHHHHHHHHHhCcCcccCCC-cCCCCCHHhhCCChhhhHHHHHHHHHH
Confidence            46789999999999999999886532    2222222  24466522   11 111        1234556666666666


Q ss_pred             HHHcC-CCeEEEE
Q psy13271         81 FIESG-SDCTLAL   92 (110)
Q Consensus        81 ~i~sG-~~~vlv~   92 (110)
                      .++.. .++.|+.
T Consensus       375 qL~~~~~~~gl~~  387 (404)
T PRK06205        375 ELQRRQARYGLET  387 (404)
T ss_pred             HHHhcCCCeEEEE
Confidence            66655 6666654

>PRK07661 acetyl-CoA acetyltransferase; Provisional

Probab=87.24  E-value=4.1  Score=30.24  Aligned_cols=74  Identities=15%  Similarity=0.135  Sum_probs=42.7

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHH--HHcCCCCCCee------eE-eccchHHHHHHHHHHHHHH
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRAL--YQIGMTGIPVF------NV-NNNCSTGSSALMLAKQFIE   83 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a--~~lg~~~~~~~------~i-~~~C~sg~~al~~A~~~i~   83 (110)
                      -...+++++|+++|++++|||.+-+.    +.+..+.+.  +.||+...|..      .. +...++|..-+..+...++
T Consensus       290 ~~~~a~~~al~~agl~~~did~~ei~----d~f~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~  365 (391)
T PRK07661        290 GPIAAIPKALKLAGLELSDIGLFELN----EAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMK  365 (391)
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEeC----CHHHHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHH
Confidence            34678999999999999999998753    333333333  45776321111      11 2234455555555555554


Q ss_pred             -cCCCeEE
Q psy13271         84 -SGSDCTL   90 (110)
Q Consensus        84 -sG~~~vl   90 (110)
                       .|.++.|
T Consensus       366 ~~~~~~g~  373 (391)
T PRK07661        366 RRNEQFGI  373 (391)
T ss_pred             hcCCCeEE
Confidence             4444444

>PRK05656 acetyl-CoA acetyltransferase; Provisional

Probab=87.17  E-value=6.6  Score=29.09  Aligned_cols=75  Identities=17%  Similarity=0.166  Sum_probs=41.9

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH--HHHHcCCCCCCee------eE-eccchHHHHHHHHHHHHHH-
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQR--ALYQIGMTGIPVF------NV-NNNCSTGSSALMLAKQFIE-   83 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~--~a~~lg~~~~~~~------~i-~~~C~sg~~al~~A~~~i~-   83 (110)
                      ...+++++|+++|++++|||.+-+.    +.+....  ..+.||+...|..      .+ +...++|..-+..+...++ 
T Consensus       293 ~~~a~~~al~~agl~~~dId~~e~~----d~f~~~~~~~~e~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~  368 (393)
T PRK05656        293 PVSATRRCLDKAGWSLAELDLIEAN----EAFAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIR  368 (393)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEec----CccHHHHHHHHHHhCCCCccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHH
Confidence            3578999999999999999998753    2222222  2355776321111      11 1233445544544444444 


Q ss_pred             cCCCeEEEE
Q psy13271         84 SGSDCTLAL   92 (110)
Q Consensus        84 sG~~~vlv~   92 (110)
                      .|.++.|+.
T Consensus       369 ~~~~~gl~~  377 (393)
T PRK05656        369 RDAKKGLAT  377 (393)
T ss_pred             cCCCEEEEE
Confidence            346666543

>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

Probab=87.03  E-value=7.3  Score=26.31  Aligned_cols=82  Identities=18%  Similarity=0.114  Sum_probs=48.4

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHc-----CCCCCC----eee-EeccchHHHHHHHHHHH
Q psy13271         11 PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQI-----GMTGIP----VFN-VNNNCSTGSSALMLAKQ   80 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~l-----g~~~~~----~~~-i~~~C~sg~~al~~A~~   80 (110)
                      .+...++++++|+++|++++|||.++..........  .+...+     +....+    .-. =+..++++...+..+..
T Consensus       144 ~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~  221 (254)
T cd00327         144 GEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGD--AVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLL  221 (254)
T ss_pred             hHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCcccc--HHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHH
Confidence            456678899999999999999999877543222111  122222     221001    112 24577778888877777


Q ss_pred             HHHcC--------CCeEEEEee
Q psy13271         81 FIESG--------SDCTLALGF   94 (110)
Q Consensus        81 ~i~sG--------~~~vlv~g~   94 (110)
                      ..+.+        .+++++.+.
T Consensus       222 ~~~~~~~~~~~~~~~~~l~~~~  243 (254)
T cd00327         222 MLEHEFIPPTPREPRTVLLLGF  243 (254)
T ss_pred             HHhCCCcCCCCCCcCEEEEeeE
Confidence            66642        355655544

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.

>TIGR03725 bact_YeaZ universal bacterial protein YeaZ

Probab=86.99  E-value=1.4  Score=29.47  Aligned_cols=34  Identities=18%  Similarity=0.279  Sum_probs=27.9

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeec
Q psy13271          8 TDYPELAKEALIKALDDAGISINQVQQACCGYVY   41 (110)
Q Consensus         8 ~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~   41 (110)
                      ..-.+.....++++|++++++++|||.+.++..-
T Consensus        31 ~~h~~~l~~~i~~~l~~~~~~~~~i~~iav~~GP   64 (202)
T TIGR03725        31 RNHSEILLPMIEELLAEAGLSLQDLDAIAVGVGP   64 (202)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCC
Confidence            3455677778899999999999999999987653

This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.

>PRK08242 acetyl-CoA acetyltransferase; Validated

Probab=86.80  E-value=4.1  Score=30.41  Aligned_cols=39  Identities=15%  Similarity=0.215  Sum_probs=27.7

Q ss_pred             HHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH--HHHHcCCC
Q psy13271         15 KEALIKALDDAGISINQVQQACCGYVYGDSTCGQR--ALYQIGMT   57 (110)
Q Consensus        15 ~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~--~a~~lg~~   57 (110)
                      ..|++++|+++|++++|||.+=+.    +.+..+.  ..+.||+.
T Consensus       303 ~~a~~~al~~AGl~~~DID~~ei~----daFa~~~l~~~e~lG~~  343 (402)
T PRK08242        303 VPATRKALAKAGLTVDDIDLFELN----EAFASVVLRFMQALDIP  343 (402)
T ss_pred             HHHHHHHHHHcCCCHHHCCEEEec----chhhHHHHHHHHHhCCC
Confidence            468999999999999999988653    3333332  23567764

>KOG1394|consensus

Probab=86.67  E-value=0.62  Score=34.44  Aligned_cols=25  Identities=32%  Similarity=0.329  Sum_probs=21.7

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEE
Q psy13271         13 LAKEALIKALDDAGISINQVQQACC   37 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~   37 (110)
                      =+..++.++|+++|+.|+|||.|-.
T Consensus       302 Ga~~am~raL~~Agl~pe~i~YvNA  326 (440)
T KOG1394|consen  302 GAVLAMERALKDAGLSPEDIDYVNA  326 (440)
T ss_pred             hHHHHHHHHHHHcCCChhhcCeeec
Confidence            4567889999999999999999853

>PRK07850 acetyl-CoA acetyltransferase; Provisional

Probab=86.56  E-value=5.1  Score=29.68  Aligned_cols=75  Identities=17%  Similarity=0.058  Sum_probs=45.1

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHH--HHHcCCCCCCee------eE-eccchHHHHHHHHHHHHHH
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRA--LYQIGMTGIPVF------NV-NNNCSTGSSALMLAKQFIE   83 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~--a~~lg~~~~~~~------~i-~~~C~sg~~al~~A~~~i~   83 (110)
                      -...+++++|+++|++++|||.+=+...    +....+  .+.+|+...|..      .. ....++|+..+..+...++
T Consensus       286 ~~~~a~~~al~~agl~~~did~~ei~d~----F~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~  361 (387)
T PRK07850        286 GPVQATAKVLEKAGMKIGDIDLVEINEA----FASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALHELE  361 (387)
T ss_pred             hHHHHHHHHHHHcCCCHHHcCeeeeccc----chHHHHHHHHHcCCCCCCcCCCCchhhcCCCcchhHHHHHHHHHHHHH
Confidence            3468999999999999999998866332    222222  245665321211      11 2344567777776777776


Q ss_pred             cC-CCeEEE
Q psy13271         84 SG-SDCTLA   91 (110)
Q Consensus        84 sG-~~~vlv   91 (110)
                      .. .++.|+
T Consensus       362 ~~~~~~g~~  370 (387)
T PRK07850        362 RTDKSTALI  370 (387)
T ss_pred             hcCCCeEEE
Confidence            54 555554

>PRK06445 acetyl-CoA acetyltransferase; Provisional

Probab=86.16  E-value=5.5  Score=29.51  Aligned_cols=75  Identities=19%  Similarity=0.178  Sum_probs=43.6

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH--HHHHcCCCCCCe------eeE-eccchHHHHHHHHHHHHHHc
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQR--ALYQIGMTGIPV------FNV-NNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~--~a~~lg~~~~~~------~~i-~~~C~sg~~al~~A~~~i~s   84 (110)
                      ...+++++|+++|++++|||.+=+-..    +....  ..+.||+...|.      ... +...++|..-+..+...++.
T Consensus       294 ~~~a~~~al~~Agl~~~dId~~e~~d~----f~~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~  369 (394)
T PRK06445        294 PVPASKKALEKAGLSVKDIDLWEINEA----FAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQI  369 (394)
T ss_pred             HHHHHHHHHHHcCCCHHHcCEEEeccc----chHHHHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHHh
Confidence            467899999999999999998865332    22222  235567642121      111 22344555556555666654


Q ss_pred             C-CCeEEEE
Q psy13271         85 G-SDCTLAL   92 (110)
Q Consensus        85 G-~~~vlv~   92 (110)
                      . .++.|+.
T Consensus       370 ~~~~~gl~~  378 (394)
T PRK06445        370 KGKDYGVAT  378 (394)
T ss_pred             cCCCEEEEE
Confidence            4 6666644

>PRK06366 acetyl-CoA acetyltransferase; Provisional

Probab=85.91  E-value=5.6  Score=29.42  Aligned_cols=25  Identities=20%  Similarity=0.066  Sum_probs=21.6

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEE
Q psy13271         14 AKEALIKALDDAGISINQVQQACCG   38 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~   38 (110)
                      ...|++++|+++|++++|||.+=+.
T Consensus       287 ~~~A~~~al~~Agl~~~DiDv~Ei~  311 (388)
T PRK06366        287 PIPATRKLLEKQNKSIDYYDLVEHN  311 (388)
T ss_pred             HHHHHHHHHHHcCCCHHHcceeecc
Confidence            3689999999999999999987553

>PRK06954 acetyl-CoA acetyltransferase; Provisional

Probab=85.72  E-value=4.8  Score=29.88  Aligned_cols=25  Identities=16%  Similarity=0.106  Sum_probs=21.3

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEE
Q psy13271         13 LAKEALIKALDDAGISINQVQQACC   37 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~   37 (110)
                      -...+++++|+++|++++|||.+=+
T Consensus       296 ~~~~a~~~al~~agl~~~Did~~ei  320 (397)
T PRK06954        296 APVGAIRKLFEKNGWRAAEVDLFEI  320 (397)
T ss_pred             hHHHHHHHHHHHcCCCHHHCCEEeh
Confidence            3467899999999999999999843

>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=85.29  E-value=5.8  Score=28.94  Aligned_cols=76  Identities=7%  Similarity=0.059  Sum_probs=43.6

Q ss_pred             HHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC--CCeeeEeccchHHHHHHHHH-HHHHHcC-CCeEE
Q psy13271         15 KEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG--IPVFNVNNNCSTGSSALMLA-KQFIESG-SDCTL   90 (110)
Q Consensus        15 ~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~--~~~~~i~~~C~sg~~al~~A-~~~i~sG-~~~vl   90 (110)
                      ..+++++|+++|++++|||.+++-..  ....-..+.+.||+..  .+...+..-..++...+-.+ .+.+..| .+.+|
T Consensus       245 ~~~i~~~L~~~gl~~~did~~v~HQ~--~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~~~~~~~~~~ll  322 (353)
T PRK12880        245 PKSFKEILEFSKVDEKDIAFHLFHQS--NAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCELDTPKEFKASL  322 (353)
T ss_pred             HHHHHHHHHHcCCCHHHCCEEEECCC--CHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHHHHHcCCcEEEE
Confidence            45788999999999999999987432  1122345677888853  22122232222333333222 3445677 77444


Q ss_pred             EE
Q psy13271         91 AL   92 (110)
Q Consensus        91 v~   92 (110)
                      +.
T Consensus       323 ~~  324 (353)
T PRK12880        323 SA  324 (353)
T ss_pred             EE
Confidence            43

>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids

Probab=85.27  E-value=5.8  Score=24.59  Aligned_cols=45  Identities=16%  Similarity=0.223  Sum_probs=31.0

Q ss_pred             HHHHHHHcCCCccccCeEEEEeecCCC--cchhHHHHHcC-CCCCCeee
Q psy13271         18 LIKALDDAGISINQVQQACCGYVYGDS--TCGQRALYQIG-MTGIPVFN   63 (110)
Q Consensus        18 ~~~al~~agl~~~~id~vi~~~~~~~~--~~~~~~a~~lg-~~~~~~~~   63 (110)
                      ..+.+++.+++++||-.+++. .++|.  .+|+.+++.+| +..+|.+.
T Consensus        26 l~~i~~~N~l~~edivSv~FT-~T~DL~a~FPA~aaR~~~~~~~Vplmc   73 (117)
T cd02185          26 LEEIIERNNIKPEDIISVIFT-VTPDLDAAFPAKAARELGGWKYVPLMC   73 (117)
T ss_pred             HHHHHHHcCCCHHHEEEEEEE-eCCcccccChHHHHHhcCCCCCcceee
Confidence            345567789999999888874 44543  35778888885 44666554

In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.

>PRK08235 acetyl-CoA acetyltransferase; Provisional

Probab=85.18  E-value=4.7  Score=29.91  Aligned_cols=75  Identities=9%  Similarity=0.082  Sum_probs=43.1

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHH--HHHcCCCCCCee------eE-eccchHHHHHHHHHHHHHH
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRA--LYQIGMTGIPVF------NV-NNNCSTGSSALMLAKQFIE   83 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~--a~~lg~~~~~~~------~i-~~~C~sg~~al~~A~~~i~   83 (110)
                      ....|++++|+++|++++|||.+=+.    +.+....+  .+.||+...|..      .. +...++|..-+..+...++
T Consensus       292 ~~~~a~~~al~~agl~~~did~~e~~----d~f~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~  367 (393)
T PRK08235        292 TPGYAINALLEKTGKTVEDIDLFEIN----EAFAAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELK  367 (393)
T ss_pred             hHHHHHHHHHHHhCCCHHHCCeehhc----chhHHHHHHHHHHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHH
Confidence            34579999999999999999988542    33333332  355776421211      11 2234555555555566665


Q ss_pred             cC-CCeEEE
Q psy13271         84 SG-SDCTLA   91 (110)
Q Consensus        84 sG-~~~vlv   91 (110)
                      .. .++.++
T Consensus       368 ~~~~~~g~~  376 (393)
T PRK08235        368 RRGGGIGIA  376 (393)
T ss_pred             hcCCCeEEE
Confidence            33 445443

>PRK07851 acetyl-CoA acetyltransferase; Provisional

Probab=84.74  E-value=5.3  Score=29.78  Aligned_cols=23  Identities=35%  Similarity=0.407  Sum_probs=20.5

Q ss_pred             HHHHHHHHHHHcCCCccccCeEE
Q psy13271         14 AKEALIKALDDAGISINQVQQAC   36 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi   36 (110)
                      ...+++++|+++|++++|||.+=
T Consensus       305 ~~~a~~~al~~Agi~~~did~~e  327 (406)
T PRK07851        305 PVEASKQALARAGMSIDDIDLVE  327 (406)
T ss_pred             HHHHHHHHHHHhCCCHHHCCeeh
Confidence            45789999999999999999883

>PF09887 DUF2114: Uncharacterized protein conserved in archaea (DUF2114); InterPro: IPR008303 There are currently no experimental data for members of this group or their homologues

Probab=84.37  E-value=1.5  Score=32.54  Aligned_cols=35  Identities=14%  Similarity=0.233  Sum_probs=30.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCcc-ccCeEEEEee
Q psy13271          6 EDTDYPELAKEALIKALDDAGISIN-QVQQACCGYV   40 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~-~id~vi~~~~   40 (110)
                      ..++..+|..+...+++++++++.+ |+|.|+-++.
T Consensus        63 TrEsV~elVrdtl~e~~k~A~l~i~~DL~FVVRSTG   98 (448)
T PF09887_consen   63 TRESVAELVRDTLLESHKKAHLDIKKDLDFVVRSTG   98 (448)
T ss_pred             cHHHHHHHHHHHHHHHHHHcCCCccccceEEEeecc
Confidence            4577889999999999999999987 9999887653

The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.

>PRK07801 acetyl-CoA acetyltransferase; Provisional

Probab=84.23  E-value=8  Score=28.46  Aligned_cols=74  Identities=18%  Similarity=0.138  Sum_probs=43.3

Q ss_pred             HHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH--HHHHcCCCCCCeee----E---eccchHHHHHHHHHHHHHHcC
Q psy13271         15 KEALIKALDDAGISINQVQQACCGYVYGDSTCGQR--ALYQIGMTGIPVFN----V---NNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus        15 ~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~--~a~~lg~~~~~~~~----i---~~~C~sg~~al~~A~~~i~sG   85 (110)
                      ..+++++++++|+.++|||.+=+-    +.+....  ..+.+|+.+.|...    +   ....++|..-+......++..
T Consensus       283 ~~a~~~a~~~agi~~~did~~e~~----d~Fa~~~~~~~e~lG~~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~~  358 (382)
T PRK07801        283 IPATRYALEKTGLSIDDIDVVEIN----EAFAPVVLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLMTTLLHELERT  358 (382)
T ss_pred             HHHHHHHHHHcCCCHHHcCEeeec----ccchHHHHHHHHHhCCCchhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHhc
Confidence            578999999999999999988442    2222222  23457764322211    1   123456666666666666543


Q ss_pred             -CCeEEEE
Q psy13271         86 -SDCTLAL   92 (110)
Q Consensus        86 -~~~vlv~   92 (110)
                       .++.|+.
T Consensus       359 ~~~~gl~~  366 (382)
T PRK07801        359 GGRYGLQT  366 (382)
T ss_pred             CCCEEEEE
Confidence             5565543

>PRK06158 thiolase; Provisional

Probab=83.32  E-value=4.4  Score=29.88  Aligned_cols=26  Identities=19%  Similarity=0.101  Sum_probs=22.0

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEE
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCG   38 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~   38 (110)
                      -...+++++++++|++++|||.+=+-
T Consensus       255 ~~~~aa~~A~~~AGi~p~DId~~Ely  280 (384)
T PRK06158        255 AAAESGPRAFAMAGLTPADIDVVELY  280 (384)
T ss_pred             HHHHHHHHHHHHcCCCHHHCcEEEec
Confidence            34678999999999999999987554

>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X

Probab=83.28  E-value=5.5  Score=29.96  Aligned_cols=65  Identities=26%  Similarity=0.339  Sum_probs=35.1

Q ss_pred             CCHHHHHHHHH----HHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCC-CCCC---eeeEeccchHHHH
Q psy13271          8 TDYPELAKEAL----IKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGM-TGIP---VFNVNNNCSTGSS   73 (110)
Q Consensus         8 ~~~~~l~~~a~----~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~-~~~~---~~~i~~~C~sg~~   73 (110)
                      .+..+++.-|+    +-+|+++|++++|||.|+++..++.+..+ .-+..+|+ +..+   ...+.|+.-.|..
T Consensus       300 Ir~~qlAKaAi~aGi~~Ll~~agi~~~di~~v~lAG~FG~~l~~-~~a~~iGLlP~~~~~kv~~~GN~al~GA~  372 (412)
T PF14574_consen  300 IREFQLAKAAIRAGIEILLEEAGISPEDIDRVYLAGGFGNYLDP-ESAIRIGLLPDVPAEKVRFVGNAALAGAR  372 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT--GGG--EEEEECSS-SEEEH-HHHHHTTSS--S-GGGEEEEC-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCHHHccEEEEeCcccccCCH-HHHhhcCCCCCccccCEEEECcHHHHHHH
Confidence            34455665554    45678999999999999999888777544 33456777 3322   3334454444433

>PLN02644 acetyl-CoA C-acetyltransferase

Probab=82.89  E-value=6.6  Score=29.11  Aligned_cols=73  Identities=19%  Similarity=0.158  Sum_probs=42.2

Q ss_pred             HHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH--HHHHcCCCCCCee------eE-eccchHHHHHHHHHHHHHHcC
Q psy13271         15 KEALIKALDDAGISINQVQQACCGYVYGDSTCGQR--ALYQIGMTGIPVF------NV-NNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus        15 ~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~--~a~~lg~~~~~~~------~i-~~~C~sg~~al~~A~~~i~sG   85 (110)
                      ..+++++|+++|++++|||.+=+.    +.+....  ..+.+|+...|..      .. ....++|...+......++..
T Consensus       294 ~~a~~~al~~Agi~~~Did~~Ei~----d~f~~~~l~~~e~lg~~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~  369 (394)
T PLN02644        294 ALAIPKALKHAGLEASQVDYYEIN----EAFSVVALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSK  369 (394)
T ss_pred             HHHHHHHHHHcCCCHHHCCEEEeC----cHHHHHHHHHHHHhCCCccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhc
Confidence            468999999999999999988653    2222222  2345676321211      11 233556666665556666543


Q ss_pred             -CCeEEE
Q psy13271         86 -SDCTLA   91 (110)
Q Consensus        86 -~~~vlv   91 (110)
                       .++.|+
T Consensus       370 ~~~~g~~  376 (394)
T PLN02644        370 NGKYGVA  376 (394)
T ss_pred             CCCeEEE
Confidence             555554

>PRK09604 UGMP family protein; Validated

Probab=82.39  E-value=8.4  Score=27.93  Aligned_cols=30  Identities=17%  Similarity=0.227  Sum_probs=25.4

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEee
Q psy13271         11 PELAKEALIKALDDAGISINQVQQACCGYV   40 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id~vi~~~~   40 (110)
                      .+.....++++|++++++++|||.|.++..
T Consensus        52 ~~~l~~~i~~~L~~~~~~~~did~iavt~G   81 (332)
T PRK09604         52 VENIVPLIEEALKEAGLTLEDIDAIAVTAG   81 (332)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEEecC
Confidence            456677789999999999999999998654

>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family

Probab=82.26  E-value=2.2  Score=30.45  Aligned_cols=30  Identities=13%  Similarity=0.093  Sum_probs=25.4

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEee
Q psy13271         11 PELAKEALIKALDDAGISINQVQQACCGYV   40 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id~vi~~~~   40 (110)
                      .+.....++++|++++++++|||.|.++..
T Consensus        49 ~~~l~~~i~~~l~~~~~~~~did~iav~~G   78 (305)
T TIGR00329        49 AENIPPLLERALIESNVDKSEIDLIAYTQG   78 (305)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEEecC
Confidence            456677789999999999999999998654

This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.

>PRK06504 acetyl-CoA acetyltransferase; Provisional

Probab=81.98  E-value=8.1  Score=28.71  Aligned_cols=43  Identities=21%  Similarity=0.168  Sum_probs=29.5

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH--HHHHcCCCC
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQR--ALYQIGMTG   58 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~--~a~~lg~~~   58 (110)
                      .....|++++|+++|++++|||.+=+..    .+....  ..+.||+..
T Consensus       288 ~~~~~a~~~a~~~agl~~~Did~~Ei~d----~Fa~~~l~~~e~lG~~~  332 (390)
T PRK06504        288 EAPLPATERALKKAGMKIDDIDLYEVNE----AFASVPLAWLKATGADP  332 (390)
T ss_pred             ccHHHHHHHHHHHcCCCHHHCCEEEecc----cchHHHHHHHHHhCCCC
Confidence            3445689999999999999999885532    222222  235678753

>PRK06633 acetyl-CoA acetyltransferase; Provisional

Probab=81.50  E-value=7.1  Score=29.06  Aligned_cols=25  Identities=32%  Similarity=0.286  Sum_probs=21.6

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEE
Q psy13271         13 LAKEALIKALDDAGISINQVQQACC   37 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~   37 (110)
                      ....+++++|+++|++++|||.+-+
T Consensus       291 ~~~~a~~~Al~~AGl~p~DID~~ei  315 (392)
T PRK06633        291 APVPASQKALSKAGWSVNDLEVIEV  315 (392)
T ss_pred             HHHHHHHHHHHHcCCCHHHcCeeeh
Confidence            3467899999999999999998864

>PRK08256 lipid-transfer protein; Provisional

Probab=81.26  E-value=7.7  Score=28.63  Aligned_cols=26  Identities=15%  Similarity=0.257  Sum_probs=22.1

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEE
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCG   38 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~   38 (110)
                      ....+++++|+++|++++|||.+-+-
T Consensus       265 ~~~~a~~~a~~~ag~~~~DiD~~ei~  290 (391)
T PRK08256        265 MTRAAAQQVYEQAGIGPEDIDVVELH  290 (391)
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEeec
Confidence            34579999999999999999987654

>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs

Probab=81.20  E-value=5.7  Score=28.79  Aligned_cols=80  Identities=15%  Similarity=0.061  Sum_probs=47.7

Q ss_pred             HHHHHHHHHHHHc--CCCccccCeEEEEeecCCCcchhHHHHHcCCCCCCe----eeE----eccchHHHHHHHHHHHHH
Q psy13271         13 LAKEALIKALDDA--GISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPV----FNV----NNNCSTGSSALMLAKQFI   82 (110)
Q Consensus        13 l~~~a~~~al~~a--gl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~~----~~i----~~~C~sg~~al~~A~~~i   82 (110)
                      ...++++++|+++  |++++|||.+++-...  ...-..+.+.+|+.....    ..+    ++++++-..+|..+.+.-
T Consensus       260 ~~~~~i~~~L~~~~~g~~~~did~~~~H~~~--~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g  337 (361)
T cd00831         260 NLERVLRKLLARLGIGLFKLAFDHWCVHPGG--RAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKG  337 (361)
T ss_pred             HHHHHHHHHhccccCCCccccceEEEECCCC--hHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhC
Confidence            4556788899999  9999999988874331  122345677788853111    112    345555555666555432


Q ss_pred             HcC-CCeEEEEee
Q psy13271         83 ESG-SDCTLALGF   94 (110)
Q Consensus        83 ~sG-~~~vlv~g~   94 (110)
                      +-. -+.+++++.
T Consensus       338 ~~~~Gd~vll~~~  350 (361)
T cd00831         338 RVKRGDRGLLIAF  350 (361)
T ss_pred             CCCCCCEEEEEEE
Confidence            222 367776665

PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.

>PRK08304 stage V sporulation protein AD; Validated

Probab=80.59  E-value=17  Score=26.65  Aligned_cols=88  Identities=15%  Similarity=0.237  Sum_probs=52.2

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHH----HHcCC--C------CCCeee--------Eeccch-HHH
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRAL----YQIGM--T------GIPVFN--------VNNNCS-TGS   72 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a----~~lg~--~------~~~~~~--------i~~~C~-sg~   72 (110)
                      +.+.+..-|+|.|.+|++-|.|+.|-...   .+..+.    ..-|+  .      +...|+        =..||+ |..
T Consensus       210 a~dti~~h~~d~~~~~~~yDli~tGDlg~---vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~  286 (337)
T PRK08304        210 AADTIQQHFKDTGRSPEDYDLIVTGDLGR---VGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAV  286 (337)
T ss_pred             HHHHHHHHHHHcCCChhhccEEEEcchHH---HHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHH
Confidence            45667788999999999999999874311   122221    11111  1      111221        123332 223


Q ss_pred             HHHHHHHHHHHcC-CCeEEEEeecc-CCCCCCCC
Q psy13271         73 SALMLAKQFIESG-SDCTLALGFEK-MEKGSLGA  104 (110)
Q Consensus        73 ~al~~A~~~i~sG-~~~vlv~g~e~-~s~~~~~~  104 (110)
                      ..-.+-...++.| .+++|+++.-. +|+..+..
T Consensus       287 v~~~~~~~~~~~g~~~rvl~v~tGaLls~~s~~q  320 (337)
T PRK08304        287 VTYGYLLKELQKGKLKRVLVVATGALLSPTSSQQ  320 (337)
T ss_pred             HHHHHHHHHHhcCCceEEEEEEchhhcCcchhcc
Confidence            3446668899999 99999998777 56655443

>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]

Probab=80.51  E-value=10  Score=28.24  Aligned_cols=83  Identities=13%  Similarity=0.135  Sum_probs=54.2

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCC-----C-CCee-eE-eccchHHHHHHHHHHH
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMT-----G-IPVF-NV-NNNCSTGSSALMLAKQ   80 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~-----~-~~~~-~i-~~~C~sg~~al~~A~~   80 (110)
                      ........|.++.+++.|+.++|.|.+++-..++  -.+..+++.++.+     + .... .+ +..|+|...+|.....
T Consensus       206 ~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~--k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~  283 (377)
T COG3425         206 AYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNG--KFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLD  283 (377)
T ss_pred             HHHHHHHHHHHHHHHHhCCChhhhCeEEecCCCC--chHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHh
Confidence            3445667888999999999999999999865433  2345666666553     1 1111 23 4677777777766555


Q ss_pred             HHH-cCCCeEEEEee
Q psy13271         81 FIE-SGSDCTLALGF   94 (110)
Q Consensus        81 ~i~-sG~~~vlv~g~   94 (110)
                      ... . -|+++++.-
T Consensus       284 ~a~~~-G~rIl~~SY  297 (377)
T COG3425         284 NAKLP-GDRILLFSY  297 (377)
T ss_pred             hcCCC-CCEEEEEee
Confidence            555 3 478887763

>TIGR02845 spore_V_AD stage V sporulation protein AD

Probab=80.45  E-value=20  Score=26.28  Aligned_cols=88  Identities=15%  Similarity=0.215  Sum_probs=53.1

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHH----HH-----------cCC----CCCCeeeEeccchHH-HH
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRAL----YQ-----------IGM----TGIPVFNVNNNCSTG-SS   73 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a----~~-----------lg~----~~~~~~~i~~~C~sg-~~   73 (110)
                      +.+.+.+-|+|.|.+|++-|.|+.|-...   .+..+.    +.           .|+    ...+++.=..||+-. ..
T Consensus       204 a~dti~~h~~d~~~~~~~yd~i~tgdlg~---vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsgc~csa~v  280 (327)
T TIGR02845       204 AADTIEAHFKDTGRSVDDYDLIVTGDLAR---VGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSGCACSAVV  280 (327)
T ss_pred             HHHHHHHHHHHcCCChhhccEEEecchHH---HHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCcccchhHHH
Confidence            45667788999999999999999874311   122221    11           121    011222223344322 33


Q ss_pred             HHHHHHHHHHcC-CCeEEEEeecc-CCCCCCCC
Q psy13271         74 ALMLAKQFIESG-SDCTLALGFEK-MEKGSLGA  104 (110)
Q Consensus        74 al~~A~~~i~sG-~~~vlv~g~e~-~s~~~~~~  104 (110)
                      --.+-...++.| .+++|++..-. +|+..+.+
T Consensus       281 ~~~~~~~~~~~g~~~r~l~v~tgalls~~s~~q  313 (327)
T TIGR02845       281 TYGHILKEMLRGKLKKVLVVATGALLSPTTFQQ  313 (327)
T ss_pred             HHHHHHHHHhcCcceEEEEEEchhhcCcchhcc
Confidence            345668899999 99999998777 66665544

Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	110
3s3l_A	357	CERJ; acyltransferase, FABH homologue, KS III homo	3e-08
3lma_A	347	Stage V sporulation protein AD (spovad); NESG, str	1e-07
1mzj_A	339	Beta-ketoacylsynthase III; beta-ketosynthase, arom	2e-06
3h78_A	359	PQS biosynthetic enzyme; PQSD, anthranilic acid, a	3e-06
3ss6_A	394	Acetyl-COA acetyltransferase; structural genomics,	3e-06
1hnj_A	317	Beta-ketoacyl-acyl carrier protein synthase III; F	4e-06
4dd5_A	396	Acetyl-COA acetyltransferase; structural genomics,	6e-06
1u6e_A	335	3-oxoacyl-[acyl-carrier-protein] synthase III; tra	7e-06
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	8e-06
3il3_A	323	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	1e-05
2vu1_A	392	Acetyl-COA acetyltransferase; acyltransferase, PHB	2e-05
1afw_A	393	3-ketoacetyl-COA thiolase; fatty acid metabolism;	2e-05
2ebd_A	309	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	2e-05
2iik_A	418	3-ketoacyl-COA thiolase, peroxisomal; fatty acid m	2e-05
1zow_A	313	3-oxoacyl-[acyl-carrier-protein] synthase III; FAB	3e-05
2wu9_A	442	3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o	5e-05
1wl4_A	397	Acetyl-coenzyme A acetyltransferase 2; thiolase fo	1e-04
3ov2_A	393	Curcumin synthase; type III polyketide synthase, t	2e-04
3s21_A	345	3-oxoacyl-[ACP] synthase III; non-decarboxylative	2e-04
3il6_A	321	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	3e-04
1u0m_A	382	Putative polyketide synthase; type III polyketide	7e-04
3v7i_A	413	Putative polyketide synthase; type III polyketide	8e-04
2ib8_A	395	Acetyl-COA acetyltransferase; thiolase fold, potas	8e-04

>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Length = 357

 Score = 48.8 bits (117), Expect = 3e-08
 Identities = 16/89 (17%), Positives = 27/89 (30%), Gaps = 10/89 (11%)

Query: 6   EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG-------QRALYQIGMTG 58
           E+   P +A  A   AL    +    V       ++                        
Sbjct: 50  EEDAPPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEA---VGRH 106

Query: 59  IPVFNVNNNCSTGSSALMLAKQFIESGSD 87
           +P F +   C+ G  A+ LA  ++ SG  
Sbjct: 107 VPAFGLAQRCNGGMGAIELAGAYLGSGIG 135

>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Length = 347

 Score = 47.4 bits (113), Expect = 1e-07
 Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 7/76 (9%)

Query: 12  ELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQ--RALYQIGMTGIPVFNVNNNCS 69
           +L ++A+  AL    +    +               Q   A Y      IP   +   CS
Sbjct: 57  KLMEDAVQSALSKQNLKKEDID-----IFLAGDLLNQNVTANYVARHLKIPFLCLFGACS 111

Query: 70  TGSSALMLAKQFIESG 85
           T   ++ ++   I+ G
Sbjct: 112 TSMESIAISSALIDGG 127

>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Length = 339

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 20/101 (19%), Positives = 35/101 (34%), Gaps = 12/101 (11%)

Query: 4   PKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG------QRALYQIGMT 57
           P E      +   A  +AL+ AG+   ++       +                L   G  
Sbjct: 56  PDETIQ--VMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHEL---GAD 110

Query: 58  GIPVFNVNNNCSTGSSALMLAKQFIESGS-DCTLALGFEKM 97
               F+++  C+    AL +A   +ESG     L +  E+M
Sbjct: 111 NAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERM 151

>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Length = 359

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 10/92 (10%)

Query: 13  LAKEALIKALDDAGISINQVQQACCGYVYGDSTCG------QRALYQIGMTGIPVFNVNN 66
           L   A  +A++ AG+    +       +  D          Q  L   G+  IPV ++  
Sbjct: 77  LMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLL---GLRHIPVLDIRA 133

Query: 67  NCSTGSSALMLAKQFIESGS-DCTLALGFEKM 97
             S     L +A+  I +G     L +  E +
Sbjct: 134 QASGLLYGLQMARGQILAGLARHVLVVCGEVL 165

>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Length = 394

 Score = 43.2 bits (103), Expect = 3e-06
 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 7/93 (7%)

Query: 11  PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGM-TGIPV----FNVN 65
            ELA   L +A+   G+  ++V +   G+     T          +  G P     + + 
Sbjct: 30  VELAVPVLQEAVKRGGVEPHEVDEVILGHCIQ-RTDEANTARTAALAAGFPDTVTGYTIQ 88

Query: 66  NNCSTGSSALMLAKQFIESG-SDCTLALGFEKM 97
             CS+G  A+M A   I+ G S+  +A G E M
Sbjct: 89  RQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAM 121

>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Length = 317

 Score = 42.8 bits (102), Expect = 4e-06
 Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 10/93 (10%)

Query: 12  ELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG------QRALYQIGMTGIPVFNVN 65
            +  EA  +A++ AGI  +Q+                     Q  L   G+ G P F+V 
Sbjct: 53  TMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSML---GIKGCPAFDVA 109

Query: 66  NNCSTGSSALMLAKQFIESGS-DCTLALGFEKM 97
             C+  + AL +A Q+++SG+    L +G + +
Sbjct: 110 AACAGFTYALSVADQYVKSGAVKYALVVGSDVL 142

>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Length = 396

 Score = 42.1 bits (100), Expect = 6e-06
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 7/93 (7%)

Query: 11  PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMT-GIPV----FNVN 65
            EL   A  +A+  A I+ + + ++  G V   +  GQ    QI +  GIPV      +N
Sbjct: 32  VELGVTAAKEAIKRANITPDMIDESLLGGVLT-AGLGQNIARQIALGAGIPVEKPAMTIN 90

Query: 66  NNCSTGSSALMLAKQFIESG-SDCTLALGFEKM 97
             C +G  ++ +A Q I  G +D  L  G E M
Sbjct: 91  IVCGSGLRSVSMASQLIALGDADIMLVGGAENM 123

>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Length = 335

 Score = 42.1 bits (100), Expect = 7e-06
 Identities = 23/101 (22%), Positives = 35/101 (34%), Gaps = 12/101 (11%)

Query: 4   PKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG------QRALYQIGMT 57
             E      +A EA  +AL +AG+S   +                       +L   G  
Sbjct: 57  DDESAA--SMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASL---GAK 111

Query: 58  GIPVFNVNNNCSTGSSALMLAKQFIESGS-DCTLALGFEKM 97
           GI  F+++   +    AL  A   I  G     L +G EK+
Sbjct: 112 GILGFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKL 152

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Length = 395

 Score = 42.1 bits (100), Expect = 8e-06
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 7/93 (7%)

Query: 11  PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMT-GIPV----FNVN 65
            +L   A+ +A+   G++++++ +   G V   +  GQ    QI +  GIP     + VN
Sbjct: 30  VQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQ-TGLGQNVARQIAINAGIPNSVPSYTVN 88

Query: 66  NNCSTGSSALMLAKQFIESG-SDCTLALGFEKM 97
             C +G  ++ LA Q I SG +D  +A G E M
Sbjct: 89  KLCGSGLKSVQLAAQSITSGENDVVIAGGTENM 121

>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Length = 323

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 12/101 (11%)

Query: 4   PKEDTDYPELAKEALIKALDDAGISINQVQQACCG-----YVYGDSTCG-QRALYQIGMT 57
             E      +  EA   A++ A I+   ++          + Y  + C  Q  L    + 
Sbjct: 54  EDETVAT--MGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLL---NID 108

Query: 58  GIPVFNVNNNCSTGSSALMLAKQFIESGS-DCTLALGFEKM 97
               F++   C+    AL +A QFI +G     L +G +  
Sbjct: 109 DAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLN 149

>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Length = 392

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 7/93 (7%)

Query: 11  PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMT-GIPV----FNVN 65
            EL    +   L+ AG++  +V +   G V   +  GQ    Q  M  G+P     + +N
Sbjct: 28  HELGATVISAVLERAGVAAGEVNEVILGQVLP-AGEGQNPARQAAMKAGVPQEATAWGMN 86

Query: 66  NNCSTGSSALMLAKQFIESG-SDCTLALGFEKM 97
             C +G  A+ L  Q I +G +   +A G E M
Sbjct: 87  QLCGSGLRAVALGMQQIATGDASIIVAGGMESM 119

>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Length = 393

 Score = 40.9 bits (97), Expect = 2e-05
 Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 15  KEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMT-GIPV----FNVNNNCS 69
            E + +  +     +N +++  CG V      G        +  GIP       +N  CS
Sbjct: 44  NEFIGRFPEPLRADLNLIEEVACGNVLNVG-AGATEHRAACLASGIPYSTPFVALNRQCS 102

Query: 70  TGSSALMLAKQFIESG-SDCTLALGFEKM 97
           +G +A+      I+ G  D  LALG E M
Sbjct: 103 SGLTAVNDIANKIKVGQIDIGLALGVESM 131

>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Length = 309

 Score = 40.9 bits (97), Expect = 2e-05
 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 10/93 (10%)

Query: 12  ELAKEALIKALDDAGISINQVQQACCGYVYGD----ST-CG-QRALYQIGMTGIPVFNVN 65
            +A +A  +AL +A +S  ++       +       ST C  Q  L      G+  F+++
Sbjct: 52  YMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQL---KAKGVYAFDIS 108

Query: 66  NNCSTGSSALMLAKQFIESGS-DCTLALGFEKM 97
             CS    AL +A  FI+SG     L +G EK+
Sbjct: 109 AACSGFIYALDIADSFIKSGKAKNVLVIGAEKL 141

>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Length = 418

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 27/97 (27%), Positives = 34/97 (35%), Gaps = 7/97 (7%)

Query: 7   DTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMT-GIPV---- 61
           DT   EL    +   L D  +   Q+   C G V      G            IP     
Sbjct: 52  DTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPG-AGAIMARIAQFLSDIPETVPL 110

Query: 62  FNVNNNCSTGSSALMLAKQFIESGS-DCTLALGFEKM 97
             VN  CS+G  A+      I +GS D  +A G E M
Sbjct: 111 STVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESM 147

>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Length = 313

 Score = 40.1 bits (95), Expect = 3e-05
 Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 6/98 (6%)

Query: 4   PKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALY---QIGMTGIP 60
             +DT    LA EA +KA+ DAGI    +         GD      A     ++G   + 
Sbjct: 47  DDQDTSD--LAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGKVA 104

Query: 61  VFNVNNNCSTGSSALMLAKQFIESGS-DCTLALGFEKM 97
             +    CS    +++ AKQ+++SG     L +G +K+
Sbjct: 105 SMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKL 142

>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Length = 442

 Score = 39.5 bits (93), Expect = 5e-05
 Identities = 21/97 (21%), Positives = 34/97 (35%), Gaps = 6/97 (6%)

Query: 7   DTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMT-GIPV---- 61
           DT   +L    L   ++   ++ ++V     G V    +             G P     
Sbjct: 52  DTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAV 111

Query: 62  FNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKM 97
             VN  CS+G  A+      I++G  D  +  G E M
Sbjct: 112 RTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESM 148

>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Length = 397

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 7/93 (7%)

Query: 11  PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMT-GIPV----FNVN 65
            +L    + + L  A ++   V +   G+V   + CGQ  + Q  +  GIP     ++  
Sbjct: 31  QDLGSTVIKEVLKRATVAPEDVSEVIFGHVLA-AGCGQNPVRQASVGAGIPYSVPAWSCQ 89

Query: 66  NNCSTGSSALMLAKQFIESG-SDCTLALGFEKM 97
             C +G  A+ LA Q I  G S   +A G E M
Sbjct: 90  MICGSGLKAVCLAVQSIGIGDSSIVVAGGMENM 122

>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Length = 393

 Score = 38.3 bits (89), Expect = 2e-04
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 11  PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQ--IGM--TGIPVFNVNN 66
           P LAKEA  KA+ + G   +++       + G    G        +G+  T   +   + 
Sbjct: 103 PRLAKEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQ 162

Query: 67  NCSTGSSALMLAKQFIESGSD 87
            C  G++ L +AK   E+   
Sbjct: 163 ACHMGAAMLRIAKDLAENNRG 183

>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Length = 345

 Score = 38.0 bits (89), Expect = 2e-04
 Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 11/100 (11%)

Query: 6   EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG------QRALYQIGMTG- 58
           +D    + A +A  KAL DA I I ++       V  D             L   G++  
Sbjct: 64  QDVQASDAATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNL---GVSDH 120

Query: 59  IPVFNVNNNCSTGSSALMLAKQFIESGS-DCTLALGFEKM 97
              F+V N C    + + +A + +E G  D  L +  E  
Sbjct: 121 CMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETA 160

>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* Length = 321

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 10/92 (10%)

Query: 13  LAKEALIKALDDAGISINQVQQACCGYVYGD----ST-CG-QRALYQIGMTGIPVFNVNN 66
           L  +   + L+ +G   +++       V  D    S  C  Q A+   G T    F+++ 
Sbjct: 55  LCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAI---GATEAFAFDISA 111

Query: 67  NCSTGSSALMLAKQFIESGS-DCTLALGFEKM 97
            CS    AL +A++ + SG     L +G E  
Sbjct: 112 ACSGFVYALSMAEKLVLSGRYQTGLVIGGETF 143

>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Length = 382

 Score = 36.2 bits (84), Expect = 7e-04
 Identities = 14/86 (16%), Positives = 26/86 (30%), Gaps = 14/86 (16%)

Query: 11  PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG-----QRALYQIGMTG----IPV 61
                  + +ALDDA +    +         G             +   G       IP+
Sbjct: 85  KSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEM---GFDSTTRQIPI 141

Query: 62  FNVNNNCSTGSSALMLAKQFIESGSD 87
             +   C+ G +A+  A  F  +  +
Sbjct: 142 AQL--GCAAGGAAINRAHDFCTAYPE 165

>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Length = 413

 Score = 36.5 bits (84), Expect = 8e-04
 Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 8/83 (9%)

Query: 11  PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG--QRALYQIGMTG----IPVFNV 64
               + A   AL  AG+ +  V           +  G       ++ + G    +P    
Sbjct: 138 QAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRGDTMLLPATQW 197

Query: 65  NNNCSTGSSALMLAKQFIESGSD 87
              C  G+ +L LA   + +  D
Sbjct: 198 --ACVAGTRSLALAADLVAADPD 218

>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Length = 395

 Score = 36.3 bits (85), Expect = 8e-04
 Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 7/93 (7%)

Query: 11  PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMT-GIPV----FNVN 65
            +L   A+  A++ AGI   +V++A  G V      GQ    Q  +  G+P+      +N
Sbjct: 33  TKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQ-GGEGQAPTRQAVLGAGLPISTPCTTIN 91

Query: 66  NNCSTGSSALMLAKQFIESGS-DCTLALGFEKM 97
             C++G  A+M+A Q +  G  D  +A G E M
Sbjct: 92  KVCASGMKAIMMASQSLMCGHQDVMVAGGMESM 124

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	110
4ewp_A	350	3-oxoacyl-[acyl-carrier-protein] synthase 3; trans	99.81
3lma_A	347	Stage V sporulation protein AD (spovad); NESG, str	99.8
3il3_A	323	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	99.79
4dd5_A	396	Acetyl-COA acetyltransferase; structural genomics,	99.79
3goa_A	387	3-ketoacyl-COA thiolase; metabolism, fatty acid, p	99.79
3ss6_A	394	Acetyl-COA acetyltransferase; structural genomics,	99.79
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	99.78
4dfe_A	333	3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci	99.78
3h78_A	359	PQS biosynthetic enzyme; PQSD, anthranilic acid, a	99.77
3gwa_A	365	3-oxoacyl-(acyl-carrier-protein) synthase III; str	99.77
1ulq_A	401	Putative acetyl-COA acetyltransferase; structural	99.77
4efi_A	354	3-oxoacyl-(acyl-carrier protein) synthase; structu	99.77
3il6_A	321	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	99.77
2wu9_A	442	3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o	99.76
1zow_A	313	3-oxoacyl-[acyl-carrier-protein] synthase III; FAB	99.76
2iik_A	418	3-ketoacyl-COA thiolase, peroxisomal; fatty acid m	99.76
3svk_A	407	Acetyl-COA acetyltransferase; ssgcid, NIH, niaid,	99.76
3s21_A	345	3-oxoacyl-[ACP] synthase III; non-decarboxylative	99.75
2vu1_A	392	Acetyl-COA acetyltransferase; acyltransferase, PHB	99.75
1u6e_A	335	3-oxoacyl-[acyl-carrier-protein] synthase III; tra	99.75
1mzj_A	339	Beta-ketoacylsynthase III; beta-ketosynthase, arom	99.75
1wl4_A	397	Acetyl-coenzyme A acetyltransferase 2; thiolase fo	99.75
1hnj_A	317	Beta-ketoacyl-acyl carrier protein synthase III; F	99.75
1afw_A	393	3-ketoacetyl-COA thiolase; fatty acid metabolism;	99.75
3s3l_A	357	CERJ; acyltransferase, FABH homologue, KS III homo	99.75
2ebd_A	309	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	99.74
3led_A	392	3-oxoacyl-acyl carrier protein synthase III; struc	99.74
1wdk_C	390	3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame	99.74
2ib8_A	395	Acetyl-COA acetyltransferase; thiolase fold, potas	99.73
1ub7_A	322	3-oxoacyl-[acyl-carrier protein] synthase; fatty a	99.73
3oit_A	387	OS07G0271500 protein; type III polyketide synthase	99.7
2v4w_A	460	Hydroxymethylglutaryl-COA synthase, mitochondrial;	99.7
3ov2_A	393	Curcumin synthase; type III polyketide synthase, t	99.7
2h84_A	374	Steely1; thiolase-fold, type III polyketide syntha	99.7
3v7i_A	413	Putative polyketide synthase; type III polyketide	99.69
1i88_A	389	CHS2, chalcone synthase 2; polyketide synthase, tr	99.68
2x3e_A	331	3-oxoacyl-[acyl-carrier-protein] synthase 3; HED,	99.68
3a5r_A	387	Benzalacetone synthase; chalcone synthase, type II	99.68
3awk_A	402	Chalcone synthase-like polyketide synthase; type I	99.68
2p0u_A	413	Stilbenecarboxylate synthase 2; polyketide synthas	99.68
3euo_A	379	Type III pentaketide synthase; alpha helix, acyltr	99.68
1u0m_A	382	Putative polyketide synthase; type III polyketide	99.67
2d3m_A	406	Pentaketide chromone synthase; chalcone synthase,	99.67
3mqd_A	428	Beta-ketoacyl synthase; ssgcid, ALS collaborative	99.66
1xes_A	413	Dihydropinosylvin synthase; native structure, tran	99.66
1ee0_A	402	2-pyrone synthase; polyketide synthase, thiolase f	99.66
2f82_A	450	HMG-COA synthase; HMGS1, transferase; 2.10A {Brass	99.66
3e1h_A	465	PKSIIINC, putative uncharacterized protein; resorc	99.66
1ted_A	393	PKS18; thiolase fold, substrate binding tunnel, tr	99.65
4egv_A	520	Acetyl-COA acetyltransferase; NEW SUB-family, thio	99.65
3v4n_A	388	HMG-COA synthase; hydroxymethylglutaryl-COA syntha	99.63
2gqd_A	437	3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli	99.63
3sqz_A	425	Putative hydroxymethylglutaryl-COA synthase; thiol	99.62
4ewg_A	412	Beta-ketoacyl synthase; ssgcid, structural genomic	99.62
3o04_A	413	LMO2201 protein, beta-keto-acyl carrier protein sy	99.62
1e5m_A	416	KAS II, beta ketoacyl acyl carrier protein synthas	99.61
3tsy_A	979	Fusion protein 4-coumarate--COA ligase 1, resvera	99.61
1ox0_A	430	Beta ketoacyl-acyl carrier protein synthase; trans	99.61
2vba_A	406	3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop	99.6
1tqy_A	424	Beta-ketoacyl synthase/acyl transferase; alpha-bet	99.6
2ix4_A	431	3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke	99.6
1j3n_A	408	3-oxoacyl-(acyl-carrier protein) synthase II; cond	99.6
3ho9_A	427	3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF,	99.6
2iwz_A	438	3-oxoacyl-[acyl-carrier-protein] synthase; mitocho	99.59
4ddo_A	451	3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci	99.58
2p8u_A	478	Hydroxymethylglutaryl-COA synthase, cytoplasmic; h	99.56
3hhd_A	965	Fatty acid synthase; transferase, multienzyme, meg	99.56
1tqy_B	415	Actinorhodin polyketide putative beta-ketoacyl SY;	99.56
2qo3_A	915	Eryaii erythromycin polyketide synthase modules 3;	99.55
2gp6_A	434	3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol	99.55
3kzu_A	428	3-oxoacyl-(acyl-carrier-protein) synthase II; seat	99.55
2wge_A	416	3-oxoacyl-[acyl-carrier-protein] synthase 1; beta	99.54
1xpm_A	396	3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s	99.54
2hg4_A	917	DEBS, 6-deoxyerythronolide B synthase; ketosynthas	99.54
2wya_A	460	Hydroxymethylglutaryl-COA synthase, mitochondrial;	99.51
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.29
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.24
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.13
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.13
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.1
3lma_A	347	Stage V sporulation protein AD (spovad); NESG, str	95.98
1hnj_A	317	Beta-ketoacyl-acyl carrier protein synthase III; F	95.77
1zow_A	313	3-oxoacyl-[acyl-carrier-protein] synthase III; FAB	95.65
1mzj_A	339	Beta-ketoacylsynthase III; beta-ketosynthase, arom	95.59
2ebd_A	309	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	95.45
1ub7_A	322	3-oxoacyl-[acyl-carrier protein] synthase; fatty a	95.45
2x3e_A	331	3-oxoacyl-[acyl-carrier-protein] synthase 3; HED,	95.39
1u6e_A	335	3-oxoacyl-[acyl-carrier-protein] synthase III; tra	95.33
3h78_A	359	PQS biosynthetic enzyme; PQSD, anthranilic acid, a	95.22
4dfe_A	333	3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci	94.78
1ulq_A	401	Putative acetyl-COA acetyltransferase; structural	94.67
3s21_A	345	3-oxoacyl-[ACP] synthase III; non-decarboxylative	94.62
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	94.29
3gwa_A	365	3-oxoacyl-(acyl-carrier-protein) synthase III; str	94.26
4efi_A	354	3-oxoacyl-(acyl-carrier protein) synthase; structu	94.16
1wl4_A	397	Acetyl-coenzyme A acetyltransferase 2; thiolase fo	94.13
2vu1_A	392	Acetyl-COA acetyltransferase; acyltransferase, PHB	94.11
3ss6_A	394	Acetyl-COA acetyltransferase; structural genomics,	93.88
3il3_A	323	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	93.68
4dd5_A	396	Acetyl-COA acetyltransferase; structural genomics,	93.55
1ted_A	393	PKS18; thiolase fold, substrate binding tunnel, tr	93.48
4ewp_A	350	3-oxoacyl-[acyl-carrier-protein] synthase 3; trans	93.3
2ib8_A	395	Acetyl-COA acetyltransferase; thiolase fold, potas	93.23
1xho_A	148	Chorismate mutase; southeast collaboratory for str	93.07
3tsy_A	979	Fusion protein 4-coumarate--COA ligase 1, resvera	92.71
3svk_A	407	Acetyl-COA acetyltransferase; ssgcid, NIH, niaid,	92.59
3s3l_A	357	CERJ; acyltransferase, FABH homologue, KS III homo	92.57
3led_A	392	3-oxoacyl-acyl carrier protein synthase III; struc	92.46
4egv_A	520	Acetyl-COA acetyltransferase; NEW SUB-family, thio	91.89
3r6m_A	213	YEAZ, resuscitation promoting factor; actin/HSP70	91.32
1tqy_B	415	Actinorhodin polyketide putative beta-ketoacyl SY;	91.2
2iik_A	418	3-ketoacyl-COA thiolase, peroxisomal; fatty acid m	90.96
1dbf_A	127	Protein (chorismate mutase); shikimate pathway, is	90.72
3ho9_A	427	3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF,	90.7
1u0m_A	382	Putative polyketide synthase; type III polyketide	90.58
2gel_A	231	Putative GRAM negative resuscitation promoting FA;	90.46
3kzu_A	428	3-oxoacyl-(acyl-carrier-protein) synthase II; seat	90.42
1ufy_A	122	Chorismate mutase; shikimate pathway, mutant, rike	90.35
1wdk_C	390	3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame	90.26
1j3n_A	408	3-oxoacyl-(acyl-carrier protein) synthase II; cond	89.89
2a6a_A	218	Hypothetical protein TM0874; glycoprotein endopept	89.71
4ewg_A	412	Beta-ketoacyl synthase; ssgcid, structural genomic	89.34
3o04_A	413	LMO2201 protein, beta-keto-acyl carrier protein sy	89.32
3goa_A	387	3-ketoacyl-COA thiolase; metabolism, fatty acid, p	89.3
4ddo_A	451	3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci	88.89
1tqy_A	424	Beta-ketoacyl synthase/acyl transferase; alpha-bet	88.89
1ox0_A	430	Beta ketoacyl-acyl carrier protein synthase; trans	87.96
2wge_A	416	3-oxoacyl-[acyl-carrier-protein] synthase 1; beta	87.18
2gp6_A	434	3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol	86.27
2h84_A	374	Steely1; thiolase-fold, type III polyketide syntha	84.8
2qo3_A	915	Eryaii erythromycin polyketide synthase modules 3;	84.27
2d3m_A	406	Pentaketide chromone synthase; chalcone synthase,	83.92
1afw_A	393	3-ketoacetyl-COA thiolase; fatty acid metabolism;	82.96
3eno_A	334	Putative O-sialoglycoprotein endopeptidase; hydrol	82.08
2ivn_A	330	O-sialoglycoprotein endopeptidase; UP1 keops compl	81.84
3ven_A	576	O-carbamoyltransferase TOBZ; antibiotic biosynthes	81.01
2wu9_A	442	3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o	80.43
1e5m_A	416	KAS II, beta ketoacyl acyl carrier protein synthas	80.11
3hhd_A	965	Fatty acid synthase; transferase, multienzyme, meg	80.07
2gqd_A	437	3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli	80.02

>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}

Probab=99.81  E-value=4.5e-19  Score=126.03  Aligned_cols=96  Identities=21%  Similarity=0.303  Sum_probs=88.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFI   82 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i   82 (110)
                      ++++..+|+.+|++++|+++|++++|||.||++++++++..|   ..+++.||+++.++|+++++|++++.||..|..+|
T Consensus        58 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~~~~a~di~~~C~g~~~aL~~A~~~i  137 (350)
T 4ewp_A           58 AEETVPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGATPAPAYDVSAACAGYCYGVAQADALV  137 (350)
T ss_dssp             SSCCHHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCTTSCEEEEECGGGHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCCCceEEEeecchhhHHHHHHHhhhhh
Confidence            578999999999999999999999999999999988876544   35778999988899999999999999999999999


Q ss_pred             HcC-CCeEEEEeeccCCCCC
Q psy13271         83 ESG-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        83 ~sG-~~~vlv~g~e~~s~~~  101 (110)
                      ++| .+++||+++|.+|+..
T Consensus       138 ~~g~~~~~Lvv~~E~~s~~~  157 (350)
T 4ewp_A          138 RSGTARHVLVVGVERLSDVV  157 (350)
T ss_dssp             HTTSCSEEEEEEEEEGGGGC
T ss_pred             hCCCccceeEeeeeeceecc
Confidence            999 9999999999988654

>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A

Probab=99.80  E-value=3.6e-19  Score=126.36  Aligned_cols=100  Identities=14%  Similarity=0.230  Sum_probs=85.5

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHH
Q psy13271          1 FQKPKEDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQ   80 (110)
Q Consensus         1 f~~~~~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~   80 (110)
                      ||+...+++..+|+.+|+++||+++|++++|||.||+++.++.......+++.+|   +|+++++++|++++.+|..|..
T Consensus        46 fG~~t~e~a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q~~~A~~va~~Lg---ipafdV~~ACsg~~~AL~~Aa~  122 (347)
T 3lma_A           46 CNQKNWEMAERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQNVTANYVARHLK---IPFLCLFGACSTSMESIAISSA  122 (347)
T ss_dssp             TTSSSHHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSSSTTHHHHHHHHC---CCEEEBCCSTTHHHHHHHHHHH
T ss_pred             cCCcCccHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCchhHHHHHHHHhC---CCEEEecChhHHHHHHHHHHHH
Confidence            4543235567789999999999999999999999999988775444556777784   5899999999999999999999


Q ss_pred             HHHcC-CCeEEEEeeccCCCCCCC
Q psy13271         81 FIESG-SDCTLALGFEKMEKGSLG  103 (110)
Q Consensus        81 ~i~sG-~~~vlv~g~e~~s~~~~~  103 (110)
                      +|++| +++|||+++|.+|+.+..
T Consensus       123 ~I~sG~~~~VLVVGaE~~S~aerq  146 (347)
T 3lma_A          123 LIDGGFAKRALAATSSHNATAERQ  146 (347)
T ss_dssp             HHHTTSCSEEEEEEEECGGGTTCC
T ss_pred             HHhcCCCCEEEEEEeccccchhhh
Confidence            99999 999999999999987544

>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}

Probab=99.79  E-value=1.4e-18  Score=122.76  Aligned_cols=98  Identities=18%  Similarity=0.203  Sum_probs=88.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFI   82 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i   82 (110)
                      ++++..+|+.+|++++|+++|+++++||.|++++.++++..+   ..++..+|+++.++++++++|++++.||..|.++|
T Consensus        54 ~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~v~~~C~s~~~al~~A~~~i  133 (323)
T 3il3_A           54 EDETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNIDDAISFDLAAACTGFVYALSVADQFI  133 (323)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCSSCEEEEECCGGGHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCCCccEEEECCccHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999887765433   46778899987899999999999999999999999


Q ss_pred             HcC-CCeEEEEeeccCCCCCCC
Q psy13271         83 ESG-SDCTLALGFEKMEKGSLG  103 (110)
Q Consensus        83 ~sG-~~~vlv~g~e~~s~~~~~  103 (110)
                      ++| ++++||+++|.+|.....
T Consensus       134 ~~g~~~~vLvvg~e~~s~~~~~  155 (323)
T 3il3_A          134 RAGKVKKALVIGSDLNSRKLDE  155 (323)
T ss_dssp             HTTSCSEEEEEEEEEGGGSCCT
T ss_pred             HCCCCCEEEEEEeeccccccCc
Confidence            999 999999999999876543

>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}

Probab=99.79  E-value=1.2e-18  Score=125.93  Aligned_cols=98  Identities=22%  Similarity=0.311  Sum_probs=88.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc---chhHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDST---CGQRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~---~~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      ++++..+|+.+|++++|+++|++++|||.+++++..+++.   ....++..+|++ ..|+++++++|+|++.+|+.|+++
T Consensus        27 ~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~~aCss~~~al~~A~~~  106 (396)
T 4dd5_A           27 KSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPAMTINIVCGSGLRSVSMASQL  106 (396)
T ss_dssp             TTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCEEEECCGGGHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCceEEEeccccHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999998876543   334677889996 589999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKGSLG  103 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~~~~  103 (110)
                      |++| ++++|++++|.+++.++.
T Consensus       107 I~~G~~~~vLv~g~e~~s~~~~~  129 (396)
T 4dd5_A          107 IALGDADIMLVGGAENMSMSPYL  129 (396)
T ss_dssp             HHHTSCSEEEEEEEEESTTCCEE
T ss_pred             HhcCCCCEEEEEEEecccCCccc
Confidence            9999 999999999999987653

>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}

Probab=99.79  E-value=2.2e-18  Score=124.28  Aligned_cols=98  Identities=18%  Similarity=0.279  Sum_probs=87.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHc-CCCccccCeEEEEeecCCCc----chhHHHHHcCCC-CCCeeeEeccchHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDA-GISINQVQQACCGYVYGDST----CGQRALYQIGMT-GIPVFNVNNNCSTGSSALMLAK   79 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~a-gl~~~~id~vi~~~~~~~~~----~~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~   79 (110)
                      ++++..+|+.+|++++|+++ |+++++||.+++++..++..    ....++..+|+. ..|+++++++|+|++.+|++|+
T Consensus        23 ~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~~aCss~l~Al~~A~  102 (387)
T 3goa_A           23 RNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAA  102 (387)
T ss_dssp             TTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTTSCCEEEECGGGHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCCCCcEeEecCcchHHHHHHHHHH
Confidence            37899999999999999999 99999999999998876543    223566789994 6899999999999999999999


Q ss_pred             HHHHcC-CCeEEEEeeccCCCCCCC
Q psy13271         80 QFIESG-SDCTLALGFEKMEKGSLG  103 (110)
Q Consensus        80 ~~i~sG-~~~vlv~g~e~~s~~~~~  103 (110)
                      ++|++| ++++|++|+|.+++.++.
T Consensus       103 ~~I~sG~~d~vLv~G~e~~s~~~~~  127 (387)
T 3goa_A          103 RMIMTGDAQVCLVGGVEHMGHVPMS  127 (387)
T ss_dssp             HHHHTTSCSEEEEEEEECTTTSCTT
T ss_pred             HHHhCCCCCEEEEEEEecCCCCccc
Confidence            999999 999999999999988764

>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}

Probab=99.79  E-value=1.6e-18  Score=125.16  Aligned_cols=97  Identities=24%  Similarity=0.372  Sum_probs=87.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc---chhHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDST---CGQRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~---~~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      +++++.+|+.+|++++|+++|+++++||.+++++..++..   ....++..+|++ ..|+++++++|+|++.+|++|+++
T Consensus        25 ~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~p~~~v~~aCss~~~al~~A~~~  104 (394)
T 3ss6_A           25 KNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVTGYTIQRQCSSGMQAIMSAAMQ  104 (394)
T ss_dssp             TTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTCEEEEEECGGGHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCceEEEecCcchHHHHHHHHHHHH
Confidence            5789999999999999999999999999999998876542   234567789995 579999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      |++| ++++|++|+|.+++.++
T Consensus       105 I~~G~~~~vlv~G~e~~s~~~~  126 (394)
T 3ss6_A          105 IQLGVSEVVVAGGVEAMSSSPY  126 (394)
T ss_dssp             HHHTSCSEEEEEEEEECTTCCE
T ss_pred             HhCCCCCEEEEEEEhhccCCcc
Confidence            9999 99999999999998765

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}

Probab=99.78  E-value=1.7e-18  Score=125.08  Aligned_cols=97  Identities=25%  Similarity=0.455  Sum_probs=86.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc---chhHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDST---CGQRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~---~~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      +++++.+|+.+|++++|+++|+++++||.+++++..++..   ....++..+|++ ..|+++++++|+|++.+|+.|+++
T Consensus        25 ~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p~~~v~~~Css~~~al~~A~~~  104 (395)
T 4e1l_A           25 KNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAAQS  104 (395)
T ss_dssp             TTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSCEEEECCGGGHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCceEEEccccchHHHHHHHHHHHH
Confidence            5789999999999999999999999999999998765542   334677889995 579999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      |++| ++++|++|+|.+++.++
T Consensus       105 I~~G~~~~vlv~g~e~~s~~~~  126 (395)
T 4e1l_A          105 ITSGENDVVIAGGTENMSQAPY  126 (395)
T ss_dssp             HHTTSCSEEEEEEEEETTTHHH
T ss_pred             HhCCCCCEEEEEEEecccCCcc
Confidence            9999 99999999999987543

>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}

Probab=99.78  E-value=4.9e-18  Score=120.16  Aligned_cols=98  Identities=22%  Similarity=0.205  Sum_probs=87.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCC-CCCCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGM-TGIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~-~~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      ++++..+|+.+|++++|+++|+++++||.|++++.++++..+   ..++..+|+ ...++++++++|++++.||..|+++
T Consensus        61 ~~~~~~~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~s~~~al~~A~~~  140 (333)
T 4dfe_A           61 PDVTTSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNHGAAFDVQAVCSGFAYAVATADSF  140 (333)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCCSCCEEEEEECGGGHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCCCCCcEEEeCcccHHHHHHHHHHHHH
Confidence            568999999999999999999999999999999988766433   467889999 5679999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKGSLG  103 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~~~~  103 (110)
                      |++| ++++||+++|.+++....
T Consensus       141 i~~g~~~~vLvvg~e~~s~~~~~  163 (333)
T 4dfe_A          141 IRSGQHRTALVIGAETFSRILDF  163 (333)
T ss_dssp             HHTTSCSEEEEEEEEEGGGGCCT
T ss_pred             HHcCCCCEEEEEEeeccccccCc
Confidence            9999 999999999999876433

>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*

Probab=99.77  E-value=5e-18  Score=121.48  Aligned_cols=97  Identities=19%  Similarity=0.162  Sum_probs=87.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFI   82 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i   82 (110)
                      ++++..+|+.+|++++|+++|+++++||.|++++.+++...+   ..++..+|+++.++++++++|++++.||..|..+|
T Consensus        70 ~~~~~~~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~v~~aC~s~~~Al~~A~~~i  149 (359)
T 3h78_A           70 PEQAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLRHIPVLDIRAQASGLLYGLQMARGQI  149 (359)
T ss_dssp             TTCCTHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCCSCCEEEEECGGGHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCcEEEECCHhHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999887765433   46778999988899999999999999999999999


Q ss_pred             HcC-CCeEEEEeeccCCCCCC
Q psy13271         83 ESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        83 ~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      ++| ++++||+++|.+|+...
T Consensus       150 ~sG~~~~vLvvg~e~~S~~~~  170 (359)
T 3h78_A          150 LAGLARHVLVVCGEVLSKRMD  170 (359)
T ss_dssp             HTTSCSEEEEEEEEECGGGCC
T ss_pred             HCCCcCEEEEEEEchhcccCC
Confidence            999 99999999999987643

>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A

Probab=99.77  E-value=4.9e-18  Score=121.66  Aligned_cols=96  Identities=24%  Similarity=0.241  Sum_probs=87.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      ++++..+|+.+|++++|+++|+++++||.|++++.++++..+   ..++..+|++ ++++++++++|++++.||..|.++
T Consensus        76 ~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~C~s~~~Al~~A~~~  155 (365)
T 3gwa_A           76 PRETAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHAGALDVNLGCSGYVYGLSLAKGL  155 (365)
T ss_dssp             TTCCHHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTTSEEEEEECSTTHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCceEEEecccChHHHHHHHHHHHH
Confidence            568999999999999999999999999999999988766444   4677899997 789999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~~  101 (110)
                      |++| ++++||+++|.+|...
T Consensus       156 i~~g~~~~vLvvg~e~~s~~~  176 (365)
T 3gwa_A          156 VETGAARCVLLLTADTYSKYL  176 (365)
T ss_dssp             HHTTSCSEEEEEEEECGGGGS
T ss_pred             HHcCCCCEEEEEEEchhhccC
Confidence            9999 9999999999998754

>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=99.77  E-value=4.3e-18  Score=123.17  Aligned_cols=97  Identities=22%  Similarity=0.327  Sum_probs=86.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc----chhHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDST----CGQRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQ   80 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~----~~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~   80 (110)
                      +++++.+|+.+|++++|+++|+++++||.|++++..+++.    .+..++..+|+. ..|+++++++|+|++.+|+.|++
T Consensus        22 ~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCas~~~Al~~A~~  101 (401)
T 1ulq_A           22 ASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAAR  101 (401)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCccEeeccccchHHHHHHHHHHH
Confidence            5789999999999999999999999999999998766532    345678889994 56999999999999999999999


Q ss_pred             HHHcC-CCeEEEEeeccCCCCCC
Q psy13271         81 FIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        81 ~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      +|++| +|++|++|+|.+++.|+
T Consensus       102 ~I~~G~~d~vLv~G~e~~s~~p~  124 (401)
T 1ulq_A          102 AIWAGEGKVYIGSGVESMSRAPY  124 (401)
T ss_dssp             HHHTTSCSEEEEEEEEESSSCCE
T ss_pred             HHHCCCCCEEEEEEEeecCCCcc
Confidence            99999 99999999999988664

>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}

Probab=99.77  E-value=4.9e-18  Score=121.19  Aligned_cols=96  Identities=17%  Similarity=0.139  Sum_probs=86.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCC-CCCCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGM-TGIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~-~~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      ++++..+|+.+|++++|+++|+++++||.|++++.++++..+   ..++..+|+ .++++++++++|++++.||..|.++
T Consensus        62 ~~~~~~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~  141 (354)
T 4efi_A           62 AQTSAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLPASCLALDINLGCSGYPQALWLGMNL  141 (354)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCCTTSEEEEECCCTTHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcCCCccEEeeCcccHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999887765433   467789999 4789999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~~  101 (110)
                      |++| ++++||+++|.+|+..
T Consensus       142 i~~g~~~~vLvvg~e~~s~~~  162 (354)
T 4efi_A          142 IQTGAAKRVLLAVGDTISKMI  162 (354)
T ss_dssp             HHTTSCSEEEEEEEECGGGGC
T ss_pred             HHCCCCCEEEEEEechhcccC
Confidence            9999 9999999999998754

>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*

Probab=99.77  E-value=6.8e-18  Score=119.05  Aligned_cols=93  Identities=22%  Similarity=0.230  Sum_probs=84.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHHcC-
Q psy13271         10 YPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIESG-   85 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-   85 (110)
                      ..+|+.+|++++|+++|+++++||.+++++.++++..+   ..++..+|++++++++++++|++++.||..|..+|++| 
T Consensus        52 ~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~v~~aC~s~~~al~~A~~~i~~g~  131 (321)
T 3il6_A           52 TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFAFDISAACSGFVYALSMAEKLVLSGR  131 (321)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTTCEEEEECCGGGHHHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCCceEEEeCcccHHHHHHHHHHHHHHHCCC
Confidence            89999999999999999999999999999887665433   46778999987899999999999999999999999999 


Q ss_pred             CCeEEEEeeccCCCCCC
Q psy13271         86 SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        86 ~~~vlv~g~e~~s~~~~  102 (110)
                      ++++||+++|.+|+...
T Consensus       132 ~~~vLvvg~e~~s~~~~  148 (321)
T 3il6_A          132 YQTGLVIGGETFSKMLD  148 (321)
T ss_dssp             CCCEEEEEEECGGGGSC
T ss_pred             CCEEEEEEEccccccCC
Confidence            99999999999987543

>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A

Probab=99.76  E-value=5e-18  Score=124.37  Aligned_cols=98  Identities=22%  Similarity=0.343  Sum_probs=86.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc----chhHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDST----CGQRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQ   80 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~----~~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~   80 (110)
                      +++++.+|+.+|++++|+++|+++++||.+++++..++..    ....++..+|+. ..|+++++++|+|++.+|..|++
T Consensus        51 ~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSg~~Al~~A~~  130 (442)
T 2wu9_A           51 KDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAA  130 (442)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCCCCceEEEeCCcCHHHHHHHHHHHH
Confidence            4789999999999999999999999999999998766542    233567789994 57999999999999999999999


Q ss_pred             HHHcC-CCeEEEEeeccCCCCCCC
Q psy13271         81 FIESG-SDCTLALGFEKMEKGSLG  103 (110)
Q Consensus        81 ~i~sG-~~~vlv~g~e~~s~~~~~  103 (110)
                      +|++| +|++|++|+|.+++.|+.
T Consensus       131 ~I~sG~~d~vLvgG~e~~s~~p~~  154 (442)
T 2wu9_A          131 AIKAGFYDIGIGAGLESMTTNPMA  154 (442)
T ss_dssp             HHHTTSCSEEEEEEEEETTTSCCC
T ss_pred             HHHCCCCCEEEEEEEeecCCCccc
Confidence            99999 999999999999887753

>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A

Probab=99.76  E-value=8.1e-18  Score=117.64  Aligned_cols=95  Identities=27%  Similarity=0.388  Sum_probs=85.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc---hhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC---GQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFI   82 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~---~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i   82 (110)
                      ++++..+|+.+|++++|+++|+++++||.|++++.++++..   ...++..+|+++.++++++++|+|++.||..|+++|
T Consensus        47 ~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl~~~~~~~v~~aCas~~~al~~A~~~i  126 (313)
T 1zow_A           47 DDQDTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGKVASMDQLAACSGFMYSMITAKQYV  126 (313)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHTCCSCCEEEEECGGGHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCcEEEECCcCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999988765543   356788999986799999999999999999999999


Q ss_pred             HcC-CCeEEEEeeccCCCC
Q psy13271         83 ESG-SDCTLALGFEKMEKG  100 (110)
Q Consensus        83 ~sG-~~~vlv~g~e~~s~~  100 (110)
                      ++| ++++|++++|.+++.
T Consensus       127 ~~g~~~~vLv~g~e~~s~~  145 (313)
T 1zow_A          127 QSGDYHNILVVGADKLSKI  145 (313)
T ss_dssp             HTTSCSCEEEEEEEEGGGT
T ss_pred             HCCCCCEEEEEEEcccccc
Confidence            999 999999999998765

>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}

Probab=99.76  E-value=8.2e-18  Score=122.41  Aligned_cols=97  Identities=26%  Similarity=0.354  Sum_probs=84.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc--hh-HHHHHcCC-CCCCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC--GQ-RALYQIGM-TGIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~--~~-~~a~~lg~-~~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      +++++.+|+.+|++++|+++|+++++||.|++++..+++..  .. .++..+|+ ...|+++++++|+|++.+|..|+++
T Consensus        51 ~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~~p~~~v~~aCss~~~Al~~A~~~  130 (418)
T 2iik_A           51 KDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGG  130 (418)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCCceEEEeCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999987765432  12 34567899 3679999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      |++| +|++|++|+|.+++.|+
T Consensus       131 I~~G~~d~vLv~G~e~~s~~p~  152 (418)
T 2iik_A          131 IRNGSYDIGMACGVESMSLADR  152 (418)
T ss_dssp             HHTTSCSEEEEEEEEETTTCC-
T ss_pred             HHCCCCCEEEEeccccCccCCc
Confidence            9999 99999999999998764

>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}

Probab=99.76  E-value=2.7e-18  Score=124.61  Aligned_cols=98  Identities=20%  Similarity=0.244  Sum_probs=78.2

Q ss_pred             CCCCHHHHHHHHHHHHHHH-cCCCccccCeEEEEeecCCCc----chhHHHHHcCC-CCCCeeeEeccchHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDD-AGISINQVQQACCGYVYGDST----CGQRALYQIGM-TGIPVFNVNNNCSTGSSALMLAK   79 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~-agl~~~~id~vi~~~~~~~~~----~~~~~a~~lg~-~~~~~~~i~~~C~sg~~al~~A~   79 (110)
                      ++++..+|+.+|++++|++ +|++++|||.+++++..++..    ....++..+|+ ...|+++++++|+|++.+|..|+
T Consensus        28 ~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp~~~pa~~v~~~Css~~~Al~~A~  107 (407)
T 3svk_A           28 TEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPETTGGVQLNRFCASGLEAVNTAA  107 (407)
T ss_dssp             TTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCCTTCEEEEEC---CBSCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCCCCCceEEecCcChhHHHHHHHHH
Confidence            6789999999999999999 999999999999998765432    23467788999 56899999999999999999999


Q ss_pred             HHHHcC-CCeEEEEeeccCCCCCCC
Q psy13271         80 QFIESG-SDCTLALGFEKMEKGSLG  103 (110)
Q Consensus        80 ~~i~sG-~~~vlv~g~e~~s~~~~~  103 (110)
                      ++|++| ++++|++|+|.+++.++.
T Consensus       108 ~~I~sG~~d~vLv~G~e~~s~~p~~  132 (407)
T 3svk_A          108 QKVRSGWDDLVLAGGVESMSRVPMG  132 (407)
T ss_dssp             HHHHHTSCCEEEEEEEECC------
T ss_pred             HHHHcCCCCEEEEEEEcccccCccc
Confidence            999999 999999999999986653

>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A

Probab=99.75  E-value=6.5e-18  Score=120.08  Aligned_cols=95  Identities=24%  Similarity=0.248  Sum_probs=85.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc---hhHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC---GQRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~---~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      ++++..+|+.+|++++|+++|+++++||.|++++.++++..   ...++..+|++ ..++++++++|++++.||..|.++
T Consensus        64 ~~~~~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~  143 (345)
T 3s21_A           64 QDVQASDAATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCMTFDVANACLAFINGMDIAARM  143 (345)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCEEEECCCGGGHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCceEEeECCcCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999988766543   34678889996 589999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKG  100 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~  100 (110)
                      |++| ++++||+++|.+++.
T Consensus       144 i~~g~~~~vLvvg~e~~s~~  163 (345)
T 3s21_A          144 LERGEIDYALVVDGETANLV  163 (345)
T ss_dssp             HHHTSCSEEEEEEEECCHHH
T ss_pred             HHCCCCCEEEEEEEcccchh
Confidence            9999 999999999998754

>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...

Probab=99.75  E-value=1.1e-17  Score=120.71  Aligned_cols=97  Identities=24%  Similarity=0.368  Sum_probs=86.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCC---cchhHHHHHcCCCC-CCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDS---TCGQRALYQIGMTG-IPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~---~~~~~~a~~lg~~~-~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      +++++.+|+.++++++|+++|+++++||.+++++..++.   ..+..++..+|+++ .|+++++++|+|++.+|+.|+++
T Consensus        23 ~~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~~aCaSgl~Al~~A~~~  102 (392)
T 2vu1_A           23 ANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQ  102 (392)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSEEEEEECGGGHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCceEEEecccchHHHHHHHHHHHH
Confidence            478999999999999999999999999999999876543   23457788999975 69999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      |++| +|++|++|+|.+++.++
T Consensus       103 I~~G~~d~vlvgG~e~~s~~~~  124 (392)
T 2vu1_A          103 IATGDASIIVAGGMESMSMAPH  124 (392)
T ss_dssp             HHTTSCSCEEEEEEEESTTCCE
T ss_pred             HHCCCCCEEEEEEEeccCCCcc
Confidence            9999 99999999999987665

>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A

Probab=99.75  E-value=1.6e-17  Score=117.16  Aligned_cols=96  Identities=23%  Similarity=0.260  Sum_probs=86.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc---hhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC---GQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFI   82 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~---~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i   82 (110)
                      ++++..+|+.+|++++|+++|+++++||.|++++.++++..   ...++..+|+++.++++++++|++++.||..|+++|
T Consensus        57 ~~~~~~~la~~A~~~al~~ag~~~~~id~vi~~t~~~~~~~~~~a~~v~~~lgl~~~~~~~v~~aC~s~~~al~~A~~~i  136 (335)
T 1u6e_A           57 DDESAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAKGILGFDLSAGAAGFGYALGAAADMI  136 (335)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHTCTTSEEEEEECGGGHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCCCcEeeeccccHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999988765533   356788999987799999999999999999999999


Q ss_pred             HcC-CCeEEEEeeccCCCCC
Q psy13271         83 ESG-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        83 ~sG-~~~vlv~g~e~~s~~~  101 (110)
                      ++| ++++||+++|.+++..
T Consensus       137 ~~g~~~~vLv~g~e~~s~~~  156 (335)
T 1u6e_A          137 RGGGAATMLVVGTEKLSPTI  156 (335)
T ss_dssp             HHTSCSSEEEEEEEECGGGC
T ss_pred             HcCCCCEEEEEEEccccccc
Confidence            999 9999999999988643

>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2

Probab=99.75  E-value=1.3e-17  Score=118.07  Aligned_cols=95  Identities=20%  Similarity=0.255  Sum_probs=85.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc---hhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC---GQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFI   82 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~---~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i   82 (110)
                      ++++..+|+.+|++++|+++|+++++||.|++++.++++..   ...++..+|+++.++++++++|+|++.||..|+++|
T Consensus        56 ~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~~p~~a~~v~~~lgl~~~~~~~v~~aCas~~~Al~~A~~~i  135 (339)
T 1mzj_A           56 PDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADNAGGFDLSAACAGFCHALSIAADAV  135 (339)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCChHHHHHHHHhCCCCccEEEccccchHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999988776533   356788999986799999999999999999999999


Q ss_pred             HcC-CCeEEEEeeccCCCC
Q psy13271         83 ESG-SDCTLALGFEKMEKG  100 (110)
Q Consensus        83 ~sG-~~~vlv~g~e~~s~~  100 (110)
                      ++| ++++||+++|.+++.
T Consensus       136 ~~G~~~~vLv~g~e~~s~~  154 (339)
T 1mzj_A          136 ESGGSRHVLVVATERMTDV  154 (339)
T ss_dssp             HHSSCSCEEEEEEEEGGGG
T ss_pred             HCCCCCEEEEEEEcccccc
Confidence            999 999999999998754

>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A

Probab=99.75  E-value=1.8e-17  Score=119.76  Aligned_cols=97  Identities=24%  Similarity=0.336  Sum_probs=86.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCC---cchhHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDS---TCGQRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~---~~~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      +++++.+|+.++++++|+++|+++++||.+++++..+++   .....++..+|+. ..|+++++++|+|++.||+.|+++
T Consensus        26 ~~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~~aCaSg~~Ai~~A~~~  105 (397)
T 1wl4_A           26 AAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQS  105 (397)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCEEEECCGGGHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCccEEEecCcChhHHHHHHHHHHH
Confidence            478999999999999999999999999999999876543   2345678889994 569999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      |++| +|++|++|+|.+++.|+
T Consensus       106 I~~G~~d~vlagG~e~~s~~p~  127 (397)
T 1wl4_A          106 IGIGDSSIVVAGGMENMSKAPH  127 (397)
T ss_dssp             HHTTSCSEEEEEEEEESTTCCE
T ss_pred             HHCCCCCEEEEEEEeecCCCcc
Confidence            9999 99999999999987654

>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*

Probab=99.75  E-value=1.5e-17  Score=116.54  Aligned_cols=95  Identities=22%  Similarity=0.378  Sum_probs=85.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc---hhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC---GQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFI   82 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~---~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i   82 (110)
                      ++++..+|+.+|++++|+++|+++++||.|++++..+++..   ...++..+|+++.|+++++++|+|++.||..|+++|
T Consensus        47 ~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~~~~~~~v~~aCas~~~al~~A~~~i  126 (317)
T 1hnj_A           47 PNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPAFDVAAACAGFTYALSVADQYV  126 (317)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCSSCEEEECCGGGHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCeEEeeCcccHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999988765532   356788999976799999999999999999999999


Q ss_pred             HcC-CCeEEEEeeccCCCC
Q psy13271         83 ESG-SDCTLALGFEKMEKG  100 (110)
Q Consensus        83 ~sG-~~~vlv~g~e~~s~~  100 (110)
                      ++| ++++|++++|.+++.
T Consensus       127 ~~g~~~~vlv~g~e~~s~~  145 (317)
T 1hnj_A          127 KSGAVKYALVVGSDVLART  145 (317)
T ss_dssp             HTTSCSEEEEEEEECHHHH
T ss_pred             HCCCCCEEEEEEechhccc
Confidence            999 999999999997753

>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A

Probab=99.75  E-value=7.3e-18  Score=121.83  Aligned_cols=97  Identities=25%  Similarity=0.345  Sum_probs=85.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHcC----CCccccCeEEEEeecCCCcc---hhHHHHHcCCC-CCCeeeEeccchHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAG----ISINQVQQACCGYVYGDSTC---GQRALYQIGMT-GIPVFNVNNNCSTGSSALML   77 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~ag----l~~~~id~vi~~~~~~~~~~---~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~   77 (110)
                      +++++.+|+.+|++++|+++|    +++++||.+++++..+++..   ...++..+|+. ..|+++++++|+|++.+|..
T Consensus        31 ~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCasg~~Al~~  110 (393)
T 1afw_A           31 KDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVND  110 (393)
T ss_dssp             TTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHHHHHcCCCCCceEEEEcCcCHHHHHHHHH
Confidence            478999999999999999999    99999999999987765432   34567789994 56999999999999999999


Q ss_pred             HHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         78 AKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        78 A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      |+++|++| +|++|++|+|.+++.++
T Consensus       111 A~~~I~~G~~d~vLv~G~e~~s~~p~  136 (393)
T 1afw_A          111 IANKIKVGQIDIGLALGVESMTNNYK  136 (393)
T ss_dssp             HHHHHHTTSCSEEEEEEEEEHHHHGG
T ss_pred             HHHHHHCCCCCEEEEEEEEecCCCcc
Confidence            99999999 99999999999876554

>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*

Probab=99.75  E-value=3.6e-17  Score=116.94  Aligned_cols=91  Identities=19%  Similarity=0.220  Sum_probs=82.5

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEee---cCCCc-chhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHHc
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQQACCGYV---YGDST-CGQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id~vi~~~~---~~~~~-~~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~s   84 (110)
                      +..+|+.+|++++|+++|+++++||.|++++.   .++.. ....++..+|++++++++++++|++++.||..|..+|++
T Consensus        53 ~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~~~~~~~v~~aC~~~~~al~~A~~~i~s  132 (357)
T 3s3l_A           53 APPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGRHVPAFGLAQRCNGGMGAIELAGAYLGS  132 (357)
T ss_dssp             SHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCSSSCEEEEECGGGHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCCCCcEEEEcCccHHHHHHHHHHHHHHHc
Confidence            89999999999999999999999999999987   34443 234677889998889999999999999999999999999


Q ss_pred             C-CC--eEEEEeeccCCC
Q psy13271         85 G-SD--CTLALGFEKMEK   99 (110)
Q Consensus        85 G-~~--~vlv~g~e~~s~   99 (110)
                      | ++  ++||+++|.+|.
T Consensus       133 g~~~~~~vLvvg~e~~s~  150 (357)
T 3s3l_A          133 GIGAGHAALLTTGDRFAG  150 (357)
T ss_dssp             TSSSSSEEEEEEEECCCT
T ss_pred             CCCCCCEEEEEEEecccc
Confidence            9 99  999999999985

>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}

Probab=99.74  E-value=2e-17  Score=115.41  Aligned_cols=93  Identities=24%  Similarity=0.313  Sum_probs=84.4

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc---hhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHHc
Q psy13271          8 TDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC---GQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus         8 ~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~---~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~s   84 (110)
                      ++..+|+.+|++++|+++|+++++||.|++++..+++..   ...++..+|+++.|+++++++|+|++.||..|+++|++
T Consensus        48 ~~~~~l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lgl~~~~~~~v~~~C~s~~~al~~A~~~i~~  127 (309)
T 2ebd_A           48 ETITYMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKGVYAFDISAACSGFIYALDIADSFIKS  127 (309)
T ss_dssp             CCHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHTCTTCEEEEEECGGGHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCceEEecCccchHHHHHHHHHHHHHHC
Confidence            688999999999999999999999999999988766532   35678899998779999999999999999999999999


Q ss_pred             C-CCeEEEEeeccCCCC
Q psy13271         85 G-SDCTLALGFEKMEKG  100 (110)
Q Consensus        85 G-~~~vlv~g~e~~s~~  100 (110)
                      | ++++|++++|.+++.
T Consensus       128 g~~~~vlv~g~e~~s~~  144 (309)
T 2ebd_A          128 GKAKNVLVIGAEKLSEA  144 (309)
T ss_dssp             TSCSEEEEEEEEEGGGT
T ss_pred             CCCCEEEEEEecccccc
Confidence            9 999999999998864

>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}

Probab=99.74  E-value=1.6e-17  Score=120.16  Aligned_cols=94  Identities=19%  Similarity=0.205  Sum_probs=83.8

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHHcC
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG   85 (110)
                      +..+|+.+|++++|+++|+++++||.||+++.++++..|   ..++..||++ .++++++++|++++.||..|.++|++|
T Consensus       116 ~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~-~~~~dv~~aC~g~~~aL~~A~~~i~~g  194 (392)
T 3led_A          116 ILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLG-GFAFDMNVACSSATFGLKTAADFVGGG  194 (392)
T ss_dssp             HHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCC-SEEEEEECGGGHHHHHHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCC-CeEEEECCccHHHHHHHHHHHHHHHCC
Confidence            368999999999999999999999999999887766544   3577899994 699999999999999999999999999


Q ss_pred             -CCeEEEEeeccCCCCCCC
Q psy13271         86 -SDCTLALGFEKMEKGSLG  103 (110)
Q Consensus        86 -~~~vlv~g~e~~s~~~~~  103 (110)
                       +++|||+++|.+|+....
T Consensus       195 ~~~~vLvvg~E~~S~~~d~  213 (392)
T 3led_A          195 SVDAVLMVNPEICSGHLNF  213 (392)
T ss_dssp             SCSEEEEEEEEEGGGGCCT
T ss_pred             CCCEEEEEeehhcCCcCCc
Confidence             999999999999876433

>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*

Probab=99.74  E-value=1.6e-17  Score=119.87  Aligned_cols=97  Identities=22%  Similarity=0.254  Sum_probs=85.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHc-CCCccccCeEEEEeecCCCc----chhHHHHHcCCC-CCCeeeEeccchHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDA-GISINQVQQACCGYVYGDST----CGQRALYQIGMT-GIPVFNVNNNCSTGSSALMLAK   79 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~a-gl~~~~id~vi~~~~~~~~~----~~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~   79 (110)
                      +++++.+|+.++++++|+++ |+++++||.+++++..+++.    .+..++..+|+. ..|+++++++|+|++.+|+.|+
T Consensus        26 ~~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~~aCaS~~~Al~~A~  105 (390)
T 1wdk_C           26 RNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAA  105 (390)
T ss_dssp             TTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTSEEEEEECGGGHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCCCCccEEEEcccchhHHHHHHHHH
Confidence            47899999999999999999 99999999999998765443    334677789993 4699999999999999999999


Q ss_pred             HHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         80 QFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        80 ~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      ++|++| +|++|++|+|.++..|+
T Consensus       106 ~~I~~G~~d~vlvgG~e~~s~~p~  129 (390)
T 1wdk_C          106 QAIMTGNGDVFVVGGVEHMGHVSM  129 (390)
T ss_dssp             HHHHTTSCSEEEEEEEEETTTSCT
T ss_pred             HHHHcCCCCEEEEeeeeccccCCc
Confidence            999999 99999999999887664

>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*

Probab=99.73  E-value=3.5e-17  Score=118.11  Aligned_cols=97  Identities=27%  Similarity=0.404  Sum_probs=85.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc---chhHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDST---CGQRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~---~~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      +++++.+|+.++++++|+++|+++++||.+++++..++..   ....++..+|+. ..|+++++++|+|++.||+.|+++
T Consensus        28 ~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~p~~~v~~aCaS~~~Al~~A~~~  107 (395)
T 2ib8_A           28 SLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQS  107 (395)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTCCEEEEECGGGHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCceEEEecccccHHHHHHHHHHHH
Confidence            4589999999999999999999999999999988765432   345677889993 569999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      |++| +|++|++|+|.+++.++
T Consensus       108 I~~G~~d~vlvgG~e~~s~~~~  129 (395)
T 2ib8_A          108 LMCGHQDVMVAGGMESMSNVPY  129 (395)
T ss_dssp             HHTTSCSEEEEEEEEEGGGCCE
T ss_pred             HHCCCCCEEEEEeeecccCCcc
Confidence            9999 99999999999887665

>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2

Probab=99.73  E-value=3.8e-17  Score=114.69  Aligned_cols=95  Identities=21%  Similarity=0.212  Sum_probs=85.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc---hhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC---GQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFI   82 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~---~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i   82 (110)
                      ++++..+|+.+|++++|+++|+++++||.|++++..++...   ...++..+|+ ..|+++++++|+|++.||..|+++|
T Consensus        46 ~~~~~~~la~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl-~~~~~~v~~aCas~~~al~~A~~~i  124 (322)
T 1ub7_A           46 EDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL-KAFAYDLLAGCPGWIYALAQAHALV  124 (322)
T ss_dssp             TTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC-CCEEEEEECSTTHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCC-CCEEEeeCccchHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999987765532   3567889999 6799999999999999999999999


Q ss_pred             HcC-CCeEEEEeeccCCCCC
Q psy13271         83 ESG-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        83 ~sG-~~~vlv~g~e~~s~~~  101 (110)
                      ++| ++++|++++|.+++..
T Consensus       125 ~~g~~~~vlv~g~e~~s~~~  144 (322)
T 1ub7_A          125 EAGLAQKVLAVGAEALSKII  144 (322)
T ss_dssp             HTTSCSEEEEEEEECGGGTS
T ss_pred             HcCCCCEEEEEEechhcccc
Confidence            999 9999999999987643

>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A

Probab=99.70  E-value=2e-16  Score=114.13  Aligned_cols=89  Identities=26%  Similarity=0.275  Sum_probs=80.0

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCCCC--eeeEeccchHHHHHHHHHHHHHH
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTGIP--VFNVNNNCSTGSSALMLAKQFIE   83 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~~~--~~~i~~~C~sg~~al~~A~~~i~   83 (110)
                      +..+|+.+|+++||+++|++++|||.||++++++ ...|   ..++..||+++..  +++++.+|++++.||..|..+|+
T Consensus        95 ~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~-~~~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~  173 (387)
T 3oit_A           95 AVPELAAEAAKKAIAEWGRPAADITHLVVTTNSG-AHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAE  173 (387)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CEESCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CCcccHHHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHHh
Confidence            5788999999999999999999999999998877 3333   4677899998644  79999999999999999999999


Q ss_pred             cC-CCeEEEEeeccCC
Q psy13271         84 SG-SDCTLALGFEKME   98 (110)
Q Consensus        84 sG-~~~vlv~g~e~~s   98 (110)
                      +| .++|||+++|.+|
T Consensus       174 sg~~~~vLvvg~E~~s  189 (387)
T 3oit_A          174 NSRGARVLVVAAELTL  189 (387)
T ss_dssp             SSTTCEEEEEEEECGG
T ss_pred             cCCCCEEEEEEEeccc
Confidence            99 9999999999997

>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A

Probab=99.70  E-value=2e-16  Score=114.37  Aligned_cols=91  Identities=22%  Similarity=0.274  Sum_probs=80.5

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc--hhHHHHHcCCCCCC--eeeEeccchHHHHHHHHHHHHHHc
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC--GQRALYQIGMTGIP--VFNVNNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~--~~~~a~~lg~~~~~--~~~i~~~C~sg~~al~~A~~~i~s   84 (110)
                      +..+|+.+|+++||+++|++++|||.||++++++...+  ...++..||+++..  +++++.+|++++.||..|..+|++
T Consensus       101 ~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~s  180 (393)
T 3ov2_A          101 EIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAEN  180 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHHHc
Confidence            47889999999999999999999999999988773222  24578899998655  799999999999999999999999


Q ss_pred             C-CCeEEEEeeccCCC
Q psy13271         85 G-SDCTLALGFEKMEK   99 (110)
Q Consensus        85 G-~~~vlv~g~e~~s~   99 (110)
                      | +++|||+++|.+|.
T Consensus       181 g~~~~vLvvg~E~~s~  196 (393)
T 3ov2_A          181 NRGARVLVVACEITVL  196 (393)
T ss_dssp             STTCEEEEEEEECGGG
T ss_pred             CCCCEEEEEEEeccch
Confidence            9 99999999999973

>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}

Probab=99.70  E-value=1.6e-16  Score=113.73  Aligned_cols=94  Identities=19%  Similarity=0.216  Sum_probs=82.4

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc--hhHHHHHcCCCC-CCeeeEe-ccchHHHHHHHHHHHHHH
Q psy13271          8 TDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC--GQRALYQIGMTG-IPVFNVN-NNCSTGSSALMLAKQFIE   83 (110)
Q Consensus         8 ~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~--~~~~a~~lg~~~-~~~~~i~-~~C~sg~~al~~A~~~i~   83 (110)
                      ++..+|+.+|++++|+++|+++++||.+++++.++...+  ...++..+|+++ +++++++ ++|++++.||..|+++|+
T Consensus        93 ~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i~  172 (374)
T 2h84_A           93 KVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAK  172 (374)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHHHH
Confidence            457889999999999999999999999999987653322  246788999985 6899997 899999999999999999


Q ss_pred             cC-CCeEEEEeeccCCCCC
Q psy13271         84 SG-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        84 sG-~~~vlv~g~e~~s~~~  101 (110)
                      +| ++++||+++|.+++..
T Consensus       173 ~g~~~~vLv~g~e~~s~~~  191 (374)
T 2h84_A          173 ASPRNRILVVCTEVCSLHF  191 (374)
T ss_dssp             TCTTCEEEEEEEECCGGGC
T ss_pred             cCCCCEEEEEEEEecchhh
Confidence            99 9999999999988644

>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}

Probab=99.69  E-value=3.1e-16  Score=114.06  Aligned_cols=94  Identities=15%  Similarity=0.172  Sum_probs=82.8

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc--hhHHHHHcCCCC-CCeeeE-eccchHHHHHHHHHHHHHHc
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC--GQRALYQIGMTG-IPVFNV-NNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~--~~~~a~~lg~~~-~~~~~i-~~~C~sg~~al~~A~~~i~s   84 (110)
                      +..+|+.+|+++||+++|++++|||.||++++++...+  ...++..+|+++ ++.+++ +.+|++++.||..|..+|++
T Consensus       136 ~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~a  215 (413)
T 3v7i_A          136 AVQAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRGDTMLLPATQWACVAGTRSLALAADLVAA  215 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSCCSSCHHHHHHHHTTCCTTCEEEEESSCGGGHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCCCcCHHHHHHHHHhCCCCCceEEEeeCCccHHHHHHHHHHHHHHhc
Confidence            56789999999999999999999999999988764322  246788999975 678999 99999999999999999999


Q ss_pred             C-CCeEEEEeeccCCCCCC
Q psy13271         85 G-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        85 G-~~~vlv~g~e~~s~~~~  102 (110)
                      | .++|||+++|.+|....
T Consensus       216 g~~~~vLvvg~E~~S~~~~  234 (413)
T 3v7i_A          216 DPDRVVLVVISEALSTTYQ  234 (413)
T ss_dssp             CTTCEEEEEEEECGGGGCC
T ss_pred             CCCCEEEEEEEeccccccC
Confidence            9 99999999999987653

>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}

Probab=99.68  E-value=3.8e-16  Score=110.20  Aligned_cols=92  Identities=23%  Similarity=0.357  Sum_probs=82.4

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc---hhHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHHc
Q psy13271          8 TDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC---GQRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus         8 ~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~---~~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~s   84 (110)
                      ++..+|+.+|++++|+++|+  ++||.|++++.++++..   ...++..+|+++.++++++++|++++.||..|+++|++
T Consensus        51 ~~~~~la~~Aa~~al~~ag~--~~id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~~~~v~~aCas~~~Al~~A~~~i~~  128 (331)
T 2x3e_A           51 LGSGDLALRAASAALASAGL--ERVDAVVLATSTGDFCCPATAPRVAARLGLVGALAFDLSAAATGFVYGLASVGSLISA  128 (331)
T ss_dssp             CCHHHHHHHHHHHHHHHHTC--SCCSEEEEECSSCSEEESCSHHHHHHHTTCTTSEEEEEECGGGHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHHHhCCc--ccCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCcEEEEcCcChHHHHHHHHHHHHHHc
Confidence            68899999999999999999  89999999988766533   35788899998679999999999999999999999999


Q ss_pred             C-CCeEEEEeeccCCCCC
Q psy13271         85 G-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        85 G-~~~vlv~g~e~~s~~~  101 (110)
                      | ++++||+++|.+++..
T Consensus       129 g~~~~vLv~g~e~~s~~~  146 (331)
T 2x3e_A          129 GLADSALLVGVDTFSHTL  146 (331)
T ss_dssp             TSCSEEEEEEEECGGGGS
T ss_pred             CCCCEEEEEEeeccccCC
Confidence            9 9999999999987543

>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A

Probab=99.68  E-value=2.3e-16  Score=113.61  Aligned_cols=92  Identities=20%  Similarity=0.215  Sum_probs=81.0

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc--hhHHHHHcCCCCC--CeeeEeccchHHHHHHHHHHHHHH
Q psy13271          8 TDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC--GQRALYQIGMTGI--PVFNVNNNCSTGSSALMLAKQFIE   83 (110)
Q Consensus         8 ~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~--~~~~a~~lg~~~~--~~~~i~~~C~sg~~al~~A~~~i~   83 (110)
                      ++..+|+.+|++++|+++|+++++||.|++++.++...+  ...++..+|+++.  ++++++++|++++.||..|.++|+
T Consensus        96 ~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~  175 (387)
T 3a5r_A           96 KGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAE  175 (387)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHHH
Confidence            467889999999999999999999999999987753322  3467889999763  289999999999999999999999


Q ss_pred             cC-CCeEEEEeeccCCC
Q psy13271         84 SG-SDCTLALGFEKMEK   99 (110)
Q Consensus        84 sG-~~~vlv~g~e~~s~   99 (110)
                      +| +++|||+++|.++.
T Consensus       176 ~g~~~~vLvvg~e~~s~  192 (387)
T 3a5r_A          176 NNKGARVLIVCSEMTTT  192 (387)
T ss_dssp             HSTTCEEEEEEEECCTT
T ss_pred             hCCCCEEEEEEEeccch
Confidence            99 99999999999886

>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2

Probab=99.67  E-value=2.9e-16  Score=112.91  Aligned_cols=94  Identities=15%  Similarity=0.158  Sum_probs=82.2

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc--hhHHHHHcCCCC-CCeeeE-eccchHHHHHHHHHHHHHH
Q psy13271          8 TDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC--GQRALYQIGMTG-IPVFNV-NNNCSTGSSALMLAKQFIE   83 (110)
Q Consensus         8 ~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~--~~~~a~~lg~~~-~~~~~i-~~~C~sg~~al~~A~~~i~   83 (110)
                      ++..+|+.+|++++|+++|+++++||.|++++..+...+  ...++..+|+++ ++++++ +++|++++.||..|+++|+
T Consensus        82 ~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~~i~  161 (382)
T 1u0m_A           82 REAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCT  161 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCCCCCCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999887663222  346788999976 789999 8999999999999999999


Q ss_pred             cC-CCeEEEEeeccCCCCC
Q psy13271         84 SG-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        84 sG-~~~vlv~g~e~~s~~~  101 (110)
                      +| ++++||+++|.++...
T Consensus       162 ~g~~~~vLv~g~e~~s~~~  180 (382)
T 1u0m_A          162 AYPEANALIVACEFCSLCY  180 (382)
T ss_dssp             HSTTCEEEEEEEEEGGGGC
T ss_pred             cCCCCEEEEEEEeccchhc
Confidence            99 9999999999987643

>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*

Probab=99.66  E-value=3.4e-16  Score=114.07  Aligned_cols=91  Identities=19%  Similarity=0.237  Sum_probs=78.6

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCc-----------------------------chhHHHHHc
Q psy13271          8 TDYPELAKEALIKALDDAGISINQVQ----QACCGYVYGDST-----------------------------CGQRALYQI   54 (110)
Q Consensus         8 ~~~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~~-----------------------------~~~~~a~~l   54 (110)
                      .+..+|+.+++++||+++|+++++||    ++++++..+++.                             .+..++..+
T Consensus        90 d~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  169 (428)
T 3mqd_A           90 GRGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFF  169 (428)
T ss_dssp             CHHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHc
Confidence            35677999999999999999999999    788887755422                             123567789


Q ss_pred             CCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCCC
Q psy13271         55 GMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEK   99 (110)
Q Consensus        55 g~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s~   99 (110)
                      |+++ |+++++++|+|++.||+.|+++|++| +|.+|++|+|.++.
T Consensus       170 gl~g-p~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~  214 (428)
T 3mqd_A          170 KIKG-INYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDW  214 (428)
T ss_dssp             TCCS-CEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH
T ss_pred             CCCC-ceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccch
Confidence            9986 99999999999999999999999999 99999999998764

>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A

Probab=99.66  E-value=1e-15  Score=111.27  Aligned_cols=91  Identities=22%  Similarity=0.240  Sum_probs=80.5

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc--hhHHHHHcCCCC-C-CeeeEeccchHHHHHHHHHHHHHHc
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC--GQRALYQIGMTG-I-PVFNVNNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~--~~~~a~~lg~~~-~-~~~~i~~~C~sg~~al~~A~~~i~s   84 (110)
                      +..+|+.+|++++|+++|+++++||.||+++.++...+  ...++..||+++ + ++++++++|++++.||..|.++|++
T Consensus       124 ~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~~  203 (413)
T 1xes_A          124 EVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAEN  203 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999988763222  246788999976 3 3899999999999999999999999


Q ss_pred             C-CCeEEEEeeccCCC
Q psy13271         85 G-SDCTLALGFEKMEK   99 (110)
Q Consensus        85 G-~~~vlv~g~e~~s~   99 (110)
                      | +++|||+++|.++.
T Consensus       204 G~~~~vLvvg~E~~s~  219 (413)
T 1xes_A          204 NRGARVLVICSETTAV  219 (413)
T ss_dssp             STTCCEEEEEEECTTT
T ss_pred             CCCCEEEEEEehhhhh
Confidence            9 99999999999886

>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*

Probab=99.66  E-value=5.3e-16  Score=113.81  Aligned_cols=93  Identities=17%  Similarity=0.152  Sum_probs=82.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCC---CCCCeeeEeccchHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGM---TGIPVFNVNNNCSTGSSALMLAK   79 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~---~~~~~~~i~~~C~sg~~al~~A~   79 (110)
                      ++++..+|+.+|++++|+++|+++++||.|++++.+++...+   ..++..+|+   +++++++++++|++++.||..|.
T Consensus        48 ~~e~~~~La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lgl~g~~~~~~~~v~~aC~gg~~AL~~A~  127 (450)
T 2f82_A           48 ELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCV  127 (450)
T ss_dssp             TTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCcCCCCceEEEhhhhhHHHHHHHHHHH
Confidence            468999999999999999999999999999999887654332   456677888   56899999999999999999999


Q ss_pred             HHHHcC-C--CeEEEEeeccCC
Q psy13271         80 QFIESG-S--DCTLALGFEKME   98 (110)
Q Consensus        80 ~~i~sG-~--~~vlv~g~e~~s   98 (110)
                      ++|++| +  +++||+++|.++
T Consensus       128 ~~I~sg~~~~~~vLVvg~e~~~  149 (450)
T 2f82_A          128 NWVESNSWDGRYGLVICTDSAV  149 (450)
T ss_dssp             HHHHSTTCCSCEEEEEEEEEEC
T ss_pred             HHHHcCCCcCCeEEEEEeeecc
Confidence            999999 8  999999999875

>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}

Probab=99.66  E-value=9.9e-16  Score=112.82  Aligned_cols=90  Identities=23%  Similarity=0.210  Sum_probs=79.5

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCCCC-eeeE-eccchHHHHHHHHHHHHHHc-
Q psy13271         11 PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTGIP-VFNV-NNNCSTGSSALMLAKQFIES-   84 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~~~-~~~i-~~~C~sg~~al~~A~~~i~s-   84 (110)
                      .+|+.+|+++||+++|++++|||.||+++++ ++..|   ..++..||+++.+ ++++ +.+|++++.||..|..+|++ 
T Consensus       111 ~~La~~Aa~~AL~~agi~~~dId~li~~t~t-~~~~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~  189 (465)
T 3e1h_A          111 VPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGH  189 (465)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEEEeeC-CCCCCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcc
Confidence            5899999999999999999999999999877 43333   4678899998756 7999 79999999999999999997 


Q ss_pred             ---C-CCeEEEEeeccCCCCC
Q psy13271         85 ---G-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        85 ---G-~~~vlv~g~e~~s~~~  101 (110)
                         | +++|||+++|.+|+..
T Consensus       190 ~~~G~~~~vLVvg~E~~S~~~  210 (465)
T 3e1h_A          190 TARGKPARILVLALEVSTTMV  210 (465)
T ss_dssp             HHTTCCCEEEEEEEECCGGGH
T ss_pred             cccCCCCEEEEEEEeecchhc
Confidence               9 9999999999988654

>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A

Probab=99.65  E-value=4.6e-16  Score=112.21  Aligned_cols=94  Identities=15%  Similarity=0.121  Sum_probs=82.0

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc--hhHHHHHcCCCC-CCeeeE-eccchHHHHHHHHHHHHHH
Q psy13271          8 TDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC--GQRALYQIGMTG-IPVFNV-NNNCSTGSSALMLAKQFIE   83 (110)
Q Consensus         8 ~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~--~~~~a~~lg~~~-~~~~~i-~~~C~sg~~al~~A~~~i~   83 (110)
                      ++..+|+.+|++++|+++|+++++||.|++++.++...+  ...++..+|+++ ++.+++ +++|++++.||..|.++|+
T Consensus       111 ~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i~  190 (393)
T 1ted_A          111 EHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVR  190 (393)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHHHHH
Confidence            567889999999999999999999999999987763322  346788999975 567888 8999999999999999999


Q ss_pred             cC-CCeEEEEeeccCCCCC
Q psy13271         84 SG-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        84 sG-~~~vlv~g~e~~s~~~  101 (110)
                      +| ++++||+++|.++...
T Consensus       191 ~G~~~~vLv~g~e~~s~~~  209 (393)
T 1ted_A          191 AHPAMKALVVCIELCSVNA  209 (393)
T ss_dssp             HSTTCEEEEEEEEECGGGC
T ss_pred             cCCCCEEEEEEEEeccccC
Confidence            99 9999999999988653

>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}

Probab=99.65  E-value=2.8e-16  Score=117.13  Aligned_cols=99  Identities=19%  Similarity=0.081  Sum_probs=79.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCC---------------cchhHHHHHcCCCCCCeeeEeccchH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDS---------------TCGQRALYQIGMTGIPVFNVNNNCST   70 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~---------------~~~~~~a~~lg~~~~~~~~i~~~C~s   70 (110)
                      ++.++.+|+.+|++++|+|+|+++++||.+|.+......               ..+..++..+|+++.+.+.++.+|+|
T Consensus        38 ~~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~~va~~lGl~~~~~~~~~~~caS  117 (520)
T 4egv_A           38 RGMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPRSVARNIGADPAHAVLEVIGGQS  117 (520)
T ss_dssp             -CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHHHHHHHHTCCCSEEEECCSSTTH
T ss_pred             CCCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHHHHHHHcCCCCceEEEecCCCHH
Confidence            578999999999999999999999998877655432111               12345678899988888889999999


Q ss_pred             HHHHHHHHHHHHHcC-CCeEEEEeeccCCCCCCCC
Q psy13271         71 GSSALMLAKQFIESG-SDCTLALGFEKMEKGSLGA  104 (110)
Q Consensus        71 g~~al~~A~~~i~sG-~~~vlv~g~e~~s~~~~~~  104 (110)
                      ++.+++.|++.|++| +|++|++|+|+||+.++..
T Consensus       118 g~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~  152 (520)
T 4egv_A          118 PQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFS  152 (520)
T ss_dssp             HHHHHHHHHHHHHTTSCSEEEEEEEECCC------
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEEEEEecccccccc
Confidence            999999999999999 9999999999999887653

>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*

Probab=99.63  E-value=5.8e-16  Score=111.84  Aligned_cols=94  Identities=14%  Similarity=0.119  Sum_probs=84.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCC-CCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTG-IPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~-~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      ++++..+|+.+|++++|++++  +++||.|++++.+++...+   ..++..||+++ +++++++++|++++.||..|..+
T Consensus        52 ~~e~~~~La~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~~  129 (388)
T 3v4n_A           52 ISQDIVTFAANAAEAILTKED--KEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARSFEIKEAXYGATAGLQLAKNH  129 (388)
T ss_dssp             TTCCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESGGGHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhCC--cccCCEEEEEeccCCCcCccHHHHHHHHcCCCCCceEeehhhhhhHHHHHHHHHHHH
Confidence            578999999999999999987  9999999999987766433   46788999975 89999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~~  101 (110)
                      |++| .+++||+++|.++...
T Consensus       130 i~sg~~~~vLVvg~e~~s~~~  150 (388)
T 3v4n_A          130 VALHPDKKVLVVAADIAKYGL  150 (388)
T ss_dssp             HHHCTTCEEEEEEEEEECCCT
T ss_pred             HhcCCCCEEEEEEehhhcccC
Confidence            9999 9999999999987643

>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}

Probab=99.63  E-value=3.2e-15  Score=109.21  Aligned_cols=88  Identities=23%  Similarity=0.322  Sum_probs=76.8

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC-----------------------------cchhHHHHHcC
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQ----QACCGYVYGDS-----------------------------TCGQRALYQIG   55 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~-----------------------------~~~~~~a~~lg   55 (110)
                      +..+|+.+++++||+++|+++++||    +|++++..++.                             .....++..+|
T Consensus        97 ~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg  176 (437)
T 2gqd_A           97 RFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLG  176 (437)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhC
Confidence            4557999999999999999999999    99999876541                             11235677899


Q ss_pred             CCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccC
Q psy13271         56 MTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKM   97 (110)
Q Consensus        56 ~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~   97 (110)
                      +++ |+++++++|+|++.||+.|+++|++| +|.+|++|+|.+
T Consensus       177 l~g-p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~  218 (437)
T 2gqd_A          177 AKG-PNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAP  218 (437)
T ss_dssp             CCS-SEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC
T ss_pred             CCC-ceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence            987 99999999999999999999999999 999999999974

>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}

Probab=99.62  E-value=4.5e-15  Score=107.64  Aligned_cols=91  Identities=24%  Similarity=0.266  Sum_probs=77.3

Q ss_pred             CHHHHHHHHHHHHHHHcCC-CccccC----eEEEEeecCCC-----------------------------cchhHHHHHc
Q psy13271          9 DYPELAKEALIKALDDAGI-SINQVQ----QACCGYVYGDS-----------------------------TCGQRALYQI   54 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl-~~~~id----~vi~~~~~~~~-----------------------------~~~~~~a~~l   54 (110)
                      +..+|+.+|+++||+++|+ +++++|    ++++++..++.                             .....++..+
T Consensus        76 ~~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  155 (412)
T 4ewg_A           76 RVSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFW  155 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHh
Confidence            4567999999999999999 788888    88888765431                             0123567789


Q ss_pred             CCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCCCC
Q psy13271         55 GMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKG  100 (110)
Q Consensus        55 g~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s~~  100 (110)
                      |+++ |+++++++|+|++.||+.|+++|++| +|.+|++|+|.+++.
T Consensus       156 gl~g-p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~  201 (412)
T 4ewg_A          156 DLKG-RIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGP  201 (412)
T ss_dssp             TCCS-CEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHH
T ss_pred             CCCC-CcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHH
Confidence            9987 99999999999999999999999999 999999999987643

>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}

Probab=99.62  E-value=3.7e-15  Score=108.10  Aligned_cols=87  Identities=21%  Similarity=0.277  Sum_probs=75.6

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC---------------------c--------chhHHHHHcC
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQ----QACCGYVYGDS---------------------T--------CGQRALYQIG   55 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~---------------------~--------~~~~~a~~lg   55 (110)
                      +..+|+.+|+++||+++|+++++||    +|++++..+..                     .        ....++..+|
T Consensus        73 ~~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg  152 (413)
T 3o04_A           73 RFTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFG  152 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhC
Confidence            4556999999999999999999999    99998864321                     0        1235778899


Q ss_pred             CCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeecc
Q psy13271         56 MTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEK   96 (110)
Q Consensus        56 ~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~   96 (110)
                      +++ |+++++++|+|++.||+.|+++|++| +|++||+|+|.
T Consensus       153 l~g-p~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~  193 (413)
T 3o04_A          153 AKG-INSTTVTACATATNSIGDAFKVIERGDADAMITGGAEA  193 (413)
T ss_dssp             CCS-CEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC
T ss_pred             CCC-cceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcc
Confidence            987 99999999999999999999999999 99999999998

>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1

Probab=99.61  E-value=4.1e-15  Score=107.96  Aligned_cols=89  Identities=22%  Similarity=0.326  Sum_probs=76.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC-----------------------------cchhHHHHHcCC
Q psy13271         10 YPELAKEALIKALDDAGISINQVQ----QACCGYVYGDS-----------------------------TCGQRALYQIGM   56 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~-----------------------------~~~~~~a~~lg~   56 (110)
                      ..+|+.+++++||+++|+++++||    +|++++..++.                             .....++..+|+
T Consensus        77 ~~~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl  156 (416)
T 1e5m_A           77 FCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA  156 (416)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCC
Confidence            347999999999999999999999    79999876541                             112356678999


Q ss_pred             CCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeecc-CCC
Q psy13271         57 TGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEK-MEK   99 (110)
Q Consensus        57 ~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~-~s~   99 (110)
                      ++ |+++++++|+|++.||+.|+++|++| +|.+|++|+|. +++
T Consensus       157 ~g-p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~  200 (416)
T 1e5m_A          157 KG-PNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITP  200 (416)
T ss_dssp             CS-CEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSH
T ss_pred             CC-ceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCH
Confidence            86 99999999999999999999999999 99999999997 453

>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}

Probab=99.61  E-value=8.4e-15  Score=115.09  Aligned_cols=92  Identities=22%  Similarity=0.238  Sum_probs=78.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc--hhHHHHHcCCCC--CCeeeEeccchHHHHHHHHHHHHHHcC
Q psy13271         10 YPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC--GQRALYQIGMTG--IPVFNVNNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~--~~~~a~~lg~~~--~~~~~i~~~C~sg~~al~~A~~~i~sG   85 (110)
                      ..+|+.+|+++||+++|+++++||.|+++++.+...+  ...++..||+++  .++++++++|++++.||..|.++|++|
T Consensus       689 ~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG  768 (979)
T 3tsy_A          689 VPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENN  768 (979)
T ss_dssp             HHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHhC
Confidence            5679999999999999999999999999986543322  346788999976  347999999999999999999999999


Q ss_pred             -CCeEEEEeeccCCCCC
Q psy13271         86 -SDCTLALGFEKMEKGS  101 (110)
Q Consensus        86 -~~~vlv~g~e~~s~~~  101 (110)
                       ++++||+++|.++...
T Consensus       769 ~~~~vLvvg~e~~~~~~  785 (979)
T 3tsy_A          769 AGARVLVVCSEITVVTF  785 (979)
T ss_dssp             TTCEEEEEEEECTTTTC
T ss_pred             CCCEEEEEEEEecchhe
Confidence             9999999999865443

>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A

Probab=99.61  E-value=5.8e-15  Score=107.62  Aligned_cols=89  Identities=21%  Similarity=0.257  Sum_probs=76.2

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC-----------------------------cchhHHHHHcC
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQ----QACCGYVYGDS-----------------------------TCGQRALYQIG   55 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~-----------------------------~~~~~~a~~lg   55 (110)
                      +..+|+.+++++||+++|+++++||    ++++++..++.                             .....++..+|
T Consensus        92 ~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg  171 (430)
T 1ox0_A           92 NYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFG  171 (430)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhc
Confidence            3457999999999999999999999    68888766541                             01235677899


Q ss_pred             CCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCC
Q psy13271         56 MTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKME   98 (110)
Q Consensus        56 ~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s   98 (110)
                      +++ |+++++++|+|++.||+.|+++|++| +|.+|++|+|.+.
T Consensus       172 l~G-p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~  214 (430)
T 1ox0_A          172 ANG-VCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASI  214 (430)
T ss_dssp             CCS-CEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred             CCC-ceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccc
Confidence            987 99999999999999999999999999 9999999999843

>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...

Probab=99.60  E-value=3.3e-15  Score=108.21  Aligned_cols=90  Identities=22%  Similarity=0.240  Sum_probs=76.3

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCe-----EEEEeecCCCc------------------------------chhHHHHH
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQQ-----ACCGYVYGDST------------------------------CGQRALYQ   53 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id~-----vi~~~~~~~~~------------------------------~~~~~a~~   53 (110)
                      +..+|+.+++++||+++|++++++|.     |++++..+++.                              ....++..
T Consensus        70 ~~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~  149 (406)
T 2vba_A           70 DASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATP  149 (406)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHh
Confidence            35679999999999999999998885     99988765420                              11345567


Q ss_pred             cCCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCCC
Q psy13271         54 IGMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEK   99 (110)
Q Consensus        54 lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s~   99 (110)
                      +|+++ |+++++++|+|++.||+.|+++|++| +|.+|++|+|.++.
T Consensus       150 lgl~G-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~  195 (406)
T 2vba_A          150 FKIHG-VNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCW  195 (406)
T ss_dssp             TTCCS-CEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH
T ss_pred             ccCCC-ceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccC
Confidence            89986 99999999999999999999999999 99999999998653

>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=99.60  E-value=7.7e-15  Score=106.71  Aligned_cols=88  Identities=20%  Similarity=0.326  Sum_probs=76.6

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCc-------------------------------chh----H
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQ----QACCGYVYGDST-------------------------------CGQ----R   49 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~~-------------------------------~~~----~   49 (110)
                      +..+|+.+++++||+++|++++++|    +|++++..+++.                               .+.    .
T Consensus        72 ~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~  151 (424)
T 1tqy_A           72 RASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAE  151 (424)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhH
Confidence            3457999999999999999999999    699987755320                               123    6


Q ss_pred             HHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccC
Q psy13271         50 ALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKM   97 (110)
Q Consensus        50 ~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~   97 (110)
                      ++..+|+++ |+++++++|+|++.||+.|+++|++| +|++|++|+|.+
T Consensus       152 ia~~lgl~g-p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~  199 (424)
T 1tqy_A          152 VAWAVGAEG-PVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTP  199 (424)
T ss_dssp             HHHHHTCCS-CEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC
T ss_pred             HHHhcCCCC-ceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeeccc
Confidence            778899987 99999999999999999999999999 999999999984

>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A

Probab=99.60  E-value=6.7e-15  Score=107.37  Aligned_cols=90  Identities=23%  Similarity=0.279  Sum_probs=76.4

Q ss_pred             CHHHHHHHHHHHHHHHcCC-CccccC----eEEEEeecCCC-----------------------------cchhHHHHHc
Q psy13271          9 DYPELAKEALIKALDDAGI-SINQVQ----QACCGYVYGDS-----------------------------TCGQRALYQI   54 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl-~~~~id----~vi~~~~~~~~-----------------------------~~~~~~a~~l   54 (110)
                      +..+|+.+++++||+++|+ +++++|    +|++++..++.                             .....++..+
T Consensus        87 ~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l  166 (431)
T 2ix4_A           87 NFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKY  166 (431)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHH
Confidence            3457999999999999999 998888    68888765431                             1123567789


Q ss_pred             CCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCCC
Q psy13271         55 GMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEK   99 (110)
Q Consensus        55 g~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s~   99 (110)
                      |+++ |+++++++|+|++.||+.|+++|++| +|++|++|+|.++.
T Consensus       167 gl~g-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~  211 (431)
T 2ix4_A          167 GFQG-PNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSID  211 (431)
T ss_dssp             TCCS-CEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS
T ss_pred             CCCC-ceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC
Confidence            9987 99999999999999999999999999 99999999998653

>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=99.60  E-value=7.5e-15  Score=106.26  Aligned_cols=88  Identities=31%  Similarity=0.399  Sum_probs=75.3

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCc-----------------------------chhHHHHHcC
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQ----QACCGYVYGDST-----------------------------CGQRALYQIG   55 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~~-----------------------------~~~~~a~~lg   55 (110)
                      +..+|+.+++++||+++|+++++||    ++++++..+++.                             ....++..+|
T Consensus        70 ~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  149 (408)
T 1j3n_A           70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG  149 (408)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhC
Confidence            4567999999999999999999999    477777654421                             1235667899


Q ss_pred             CCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccC
Q psy13271         56 MTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKM   97 (110)
Q Consensus        56 ~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~   97 (110)
                      +++ |+++++++|+|++.||+.|+++|++| +|.+|++|+|.+
T Consensus       150 l~g-p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~  191 (408)
T 1j3n_A          150 FTG-PSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAA  191 (408)
T ss_dssp             CCS-CBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC
T ss_pred             CCC-ceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence            987 99999999999999999999999999 999999999973

>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A

Probab=99.60  E-value=7.1e-15  Score=107.06  Aligned_cols=89  Identities=22%  Similarity=0.347  Sum_probs=76.2

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC-----------------------------cchhHHHHHcC
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQ----QACCGYVYGDS-----------------------------TCGQRALYQIG   55 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~-----------------------------~~~~~~a~~lg   55 (110)
                      +...|+.+|+++||+++|+++++||    ++++++..+..                             .....++..+|
T Consensus        87 ~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg  166 (427)
T 3ho9_A           87 AFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYG  166 (427)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhC
Confidence            3457999999999999999999999    68888764321                             01235677899


Q ss_pred             CCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCC
Q psy13271         56 MTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKME   98 (110)
Q Consensus        56 ~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s   98 (110)
                      +++ |+++++++|+|++.||+.|+++|++| +|++||+|+|.++
T Consensus       167 l~G-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~  209 (427)
T 3ho9_A          167 LRG-PSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKAS  209 (427)
T ss_dssp             CCS-CEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC
T ss_pred             CCC-CeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccC
Confidence            987 99999999999999999999999999 9999999999985

>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A

Probab=99.59  E-value=8.2e-15  Score=107.11  Aligned_cols=88  Identities=22%  Similarity=0.264  Sum_probs=75.6

Q ss_pred             CHHHHHHHHHHHHHHHcCCCc-cccC----eEEEEeecCCC-----------------------------cchhHHHHHc
Q psy13271          9 DYPELAKEALIKALDDAGISI-NQVQ----QACCGYVYGDS-----------------------------TCGQRALYQI   54 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~-~~id----~vi~~~~~~~~-----------------------------~~~~~~a~~l   54 (110)
                      +..+|+.+++++||+++|+++ +++|    +|++++..+++                             .....++..+
T Consensus        96 ~~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l  175 (438)
T 2iwz_A           96 SPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRY  175 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHh
Confidence            445799999999999999998 8888    68888775542                             1123567789


Q ss_pred             CCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccC
Q psy13271         55 GMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKM   97 (110)
Q Consensus        55 g~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~   97 (110)
                      |+++ |+++++++|+|++.||+.|+++|++| +|++|++|+|.+
T Consensus       176 gl~g-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~  218 (438)
T 2iwz_A          176 KLKG-PNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSC  218 (438)
T ss_dssp             TCCS-CEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC
T ss_pred             CCCC-ceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehh
Confidence            9987 99999999999999999999999999 999999999973

>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*

Probab=99.58  E-value=8.7e-15  Score=107.32  Aligned_cols=89  Identities=22%  Similarity=0.221  Sum_probs=76.0

Q ss_pred             CHHHHHHHHHHHHHHHcCCCcccc-C----eEEEEeecCCC-----------------------------cchhHHHHHc
Q psy13271          9 DYPELAKEALIKALDDAGISINQV-Q----QACCGYVYGDS-----------------------------TCGQRALYQI   54 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~i-d----~vi~~~~~~~~-----------------------------~~~~~~a~~l   54 (110)
                      +..+|+.+|+++||+++|+++++| |    ++++++..+..                             .....++..+
T Consensus       101 ~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  180 (451)
T 4ddo_A          101 RFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKH  180 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHh
Confidence            456799999999999999999999 7    78888764321                             0123567889


Q ss_pred             CCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCC
Q psy13271         55 GMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKME   98 (110)
Q Consensus        55 g~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s   98 (110)
                      |+++ |+++++++|+|++.||+.|+++|++| +|++||+|+|.++
T Consensus       181 gl~G-p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~  224 (451)
T 4ddo_A          181 RFRG-PLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAF  224 (451)
T ss_dssp             TCCS-CEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC
T ss_pred             cCCC-ceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEecccccc
Confidence            9987 99999999999999999999999999 9999999999854

>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}

Probab=99.56  E-value=2.2e-14  Score=105.99  Aligned_cols=91  Identities=18%  Similarity=0.223  Sum_probs=78.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHH---HHcCCCCCCeeeEeccchHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRAL---YQIGMTGIPVFNVNNNCSTGSSALMLAK   79 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a---~~lg~~~~~~~~i~~~C~sg~~al~~A~   79 (110)
                      ++++..+|+.+|++++|+++|+++++||.|++++.+++...+   ..++   ..+|++++++++++++|++|+.||..|.
T Consensus        69 ~~e~~~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~v~~~L~~lG~~~~~~~dv~~aC~gg~~AL~~A~  148 (478)
T 2p8u_A           69 DREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAV  148 (478)
T ss_dssp             TTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTTTTTCCCCBCCEEESGGGHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCcccCccHHHHHHHHHhhcCCCCceEEEEcchhHHHHHHHHHHH
Confidence            468899999999999999999999999999999887764333   3455   3456677899999999999999999999


Q ss_pred             HHHHcC---CCeEEEEeecc
Q psy13271         80 QFIESG---SDCTLALGFEK   96 (110)
Q Consensus        80 ~~i~sG---~~~vlv~g~e~   96 (110)
                      .+|++|   .++|||+++|.
T Consensus       149 ~~i~sg~~~~~~aLVV~~Ei  168 (478)
T 2p8u_A          149 NWIESSSWDGRYALVVAGDI  168 (478)
T ss_dssp             HHHTSTTCCSCEEEEEEEEE
T ss_pred             HHHHcCCccCCEEEEEEeee
Confidence            999999   37999999995

>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A

Probab=99.56  E-value=3.1e-14  Score=112.37  Aligned_cols=88  Identities=23%  Similarity=0.326  Sum_probs=76.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCc----------------------chhHHHHHcCCCCCCeee
Q psy13271         10 YPELAKEALIKALDDAGISINQVQ----QACCGYVYGDST----------------------CGQRALYQIGMTGIPVFN   63 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~~----------------------~~~~~a~~lg~~~~~~~~   63 (110)
                      ...|+.+++++||+++|++++++|    ++++|+..+++.                      .+.+++..+|+++ |+++
T Consensus        80 ~~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~G-Ps~t  158 (965)
T 3hhd_A           80 QLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFRG-PSIA  158 (965)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCCS-CEEE
T ss_pred             HHHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCCCC-Ceee
Confidence            345999999999999999999999    788887654431                      1235778899987 9999


Q ss_pred             EeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCC
Q psy13271         64 VNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKME   98 (110)
Q Consensus        64 i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s   98 (110)
                      ++++|+|++.||++|++.|++| +|.+|++|+|.++
T Consensus       159 vdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~  194 (965)
T 3hhd_A          159 LDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLL  194 (965)
T ss_dssp             EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred             ecCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccc
Confidence            9999999999999999999999 9999999999875

>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=99.56  E-value=3.6e-14  Score=102.94  Aligned_cols=87  Identities=22%  Similarity=0.197  Sum_probs=75.9

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCc-----------------------------chhHHHHHcC
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQ----QACCGYVYGDST-----------------------------CGQRALYQIG   55 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~~-----------------------------~~~~~a~~lg   55 (110)
                      +..+|+.+++++||+++|+++++||    ++++++..+++.                             ....++..+|
T Consensus        78 ~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  157 (415)
T 1tqy_B           78 PSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHG  157 (415)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhC
Confidence            4567999999999999999999999    899987754431                             1235677899


Q ss_pred             CCCCCeeeEeccchHHHHHHHHHHHHHHcCCCeEEEEeecc
Q psy13271         56 MTGIPVFNVNNNCSTGSSALMLAKQFIESGSDCTLALGFEK   96 (110)
Q Consensus        56 ~~~~~~~~i~~~C~sg~~al~~A~~~i~sG~~~vlv~g~e~   96 (110)
                      +++ |+++++++|+|++.||+.|+++|++|+|++|++|+|.
T Consensus       158 l~g-p~~~v~~aCsS~l~Al~~A~~~I~~G~d~~LvgG~e~  197 (415)
T 1tqy_B          158 MRG-PSSALVAEQAGGLDALGHARRTIRRGTPLVVSGGVDS  197 (415)
T ss_dssp             CCS-SCEEEECGGGHHHHHHHHHHHHHHHTCSEEEEEEEEC
T ss_pred             CCC-ceEeecCCccHHHHHHHHHHHHHHcCCCEEEEeeecC
Confidence            986 9999999999999999999999999999999999998

>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}

Probab=99.55  E-value=2.6e-14  Score=112.23  Aligned_cols=90  Identities=24%  Similarity=0.348  Sum_probs=78.0

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCc---------------------chhHHHHHcCCCCCCeee
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQ----QACCGYVYGDST---------------------CGQRALYQIGMTGIPVFN   63 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~~---------------------~~~~~a~~lg~~~~~~~~   63 (110)
                      +..+|+.+++++||+++|++++++|    +|++|+..+++.                     .+.+++..+|+++ |+++
T Consensus        94 p~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~G-ps~t  172 (915)
T 2qo3_A           94 PQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGLEG-PSIS  172 (915)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTBCS-CEEE
T ss_pred             HHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCCCC-CEEE
Confidence            3457999999999999999999999    488887765542                     1235677899987 9999


Q ss_pred             EeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCCC
Q psy13271         64 VNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEK   99 (110)
Q Consensus        64 i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s~   99 (110)
                      ++++|+|++.||+.|+++|++| +|.+|++|+|.++.
T Consensus       173 v~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~  209 (915)
T 2qo3_A          173 VDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMAT  209 (915)
T ss_dssp             EECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSS
T ss_pred             ECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcC
Confidence            9999999999999999999999 99999999998754

>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}

Probab=99.55  E-value=5.8e-14  Score=102.56  Aligned_cols=89  Identities=18%  Similarity=0.220  Sum_probs=72.8

Q ss_pred             CHHHHHHHHHHHHHHHcCCC---ccccCeEEEEeecCCCc-----------------------------chhHHHHHcCC
Q psy13271          9 DYPELAKEALIKALDDAGIS---INQVQQACCGYVYGDST-----------------------------CGQRALYQIGM   56 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~---~~~id~vi~~~~~~~~~-----------------------------~~~~~a~~lg~   56 (110)
                      +..+|+.+++++||+++|++   ++++ ++++++..+++.                             ....++..+|+
T Consensus        98 ~~~~l~l~aa~~ALedAG~~~~~~~~i-gv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl  176 (434)
T 2gp6_A           98 YLQRMSTVLSRRLWENAGSPEVDTNRL-MVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHA  176 (434)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCTTSE-EEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHHHHhcCCCccCCCce-EEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcC
Confidence            34679999999999999983   2333 577887655431                             12356778999


Q ss_pred             CCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCCC
Q psy13271         57 TGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEK   99 (110)
Q Consensus        57 ~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s~   99 (110)
                      ++ |+++++++|+|++.||+.|+++|++| +|++|++|+|.++.
T Consensus       177 ~G-p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~  219 (434)
T 2gp6_A          177 KA-GVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIE  219 (434)
T ss_dssp             CS-CEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCC
T ss_pred             CC-CeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccC
Confidence            86 99999999999999999999999999 99999999998664

>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A

Probab=99.55  E-value=3.9e-14  Score=103.27  Aligned_cols=87  Identities=28%  Similarity=0.309  Sum_probs=74.3

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccc-cC----eEEEEeecCCC--------------------------c---chhHHHHHc
Q psy13271          9 DYPELAKEALIKALDDAGISINQ-VQ----QACCGYVYGDS--------------------------T---CGQRALYQI   54 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~-id----~vi~~~~~~~~--------------------------~---~~~~~a~~l   54 (110)
                      +..+|+.+|+++||+++|+++++ +|    ++++++..+..                          .   ....++..+
T Consensus        86 ~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l  165 (428)
T 3kzu_A           86 PFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKH  165 (428)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHHc
Confidence            45679999999999999999998 88    68887753320                          0   123577889


Q ss_pred             CCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeecc
Q psy13271         55 GMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEK   96 (110)
Q Consensus        55 g~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~   96 (110)
                      |+++ |+++++++|+|++.||+.|+++|++| +|++|++|+|.
T Consensus       166 gl~G-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~  207 (428)
T 3kzu_A          166 KLRG-PNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTES  207 (428)
T ss_dssp             TCCS-CEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC
T ss_pred             CCCC-ceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecC
Confidence            9987 99999999999999999999999999 99999999998

>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*

Probab=99.54  E-value=5.2e-14  Score=102.27  Aligned_cols=88  Identities=23%  Similarity=0.246  Sum_probs=73.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCc-----------------------------chhHHHHHcCC
Q psy13271         10 YPELAKEALIKALDDAGISINQVQ----QACCGYVYGDST-----------------------------CGQRALYQIGM   56 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~~-----------------------------~~~~~a~~lg~   56 (110)
                      ..+|+.+++++||+++|+  +++|    +|++++..+++.                             ....++..+|+
T Consensus        83 ~~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl  160 (416)
T 2wge_A           83 VQRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGA  160 (416)
T ss_dssp             HHHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhcc
Confidence            457999999999999998  4555    488887765431                             12356778999


Q ss_pred             CCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCCCC
Q psy13271         57 TGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKG  100 (110)
Q Consensus        57 ~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s~~  100 (110)
                      ++ |+++++++|+|++.||+.|+++|++| +|++|++|+|.++..
T Consensus       161 ~g-p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~  204 (416)
T 2wge_A          161 RA-GVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEA  204 (416)
T ss_dssp             CS-CEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCH
T ss_pred             CC-CcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccch
Confidence            86 99999999999999999999999999 999999999987643

>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*

Probab=99.54  E-value=7.3e-15  Score=106.18  Aligned_cols=92  Identities=12%  Similarity=0.215  Sum_probs=80.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc---hhHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC---GQRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~---~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      ++++..+|+.+|++++|++  +++++||.|++++.+++...   ...++..+|++ ++++++++++|++++.||..|.++
T Consensus        47 ~~e~~~~la~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~sg~~Al~~A~~~  124 (396)
T 1xpm_A           47 VNQDIVSMGANAAKDIITD--EDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDY  124 (396)
T ss_dssp             TTCCHHHHHHHHHHTTCCH--HHHHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHhc--CCHHHCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHHH
Confidence            4689999999999999988  78999999999988765432   34677889997 489999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKG  100 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~  100 (110)
                      |++| .+++||+++|. ++.
T Consensus       125 I~sg~~~~vLvvg~e~-s~~  143 (396)
T 1xpm_A          125 LATRPNEKVLVIATDT-ARY  143 (396)
T ss_dssp             HTTCTTCEEEEEEEEE-ECC
T ss_pred             HHcCCCCEEEEEeehh-hcc
Confidence            9999 99999999996 443

>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}

Probab=99.54  E-value=7.5e-14  Score=109.69  Aligned_cols=90  Identities=27%  Similarity=0.355  Sum_probs=77.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCCc----------------------chhHHHHHcCCCCCCeee
Q psy13271         10 YPELAKEALIKALDDAGISINQVQQ----ACCGYVYGDST----------------------CGQRALYQIGMTGIPVFN   63 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id~----vi~~~~~~~~~----------------------~~~~~a~~lg~~~~~~~~   63 (110)
                      ...|+.+++++||+++|++++++|.    |++|+..+++.                      .+..++..+|+++ |+++
T Consensus       116 ~~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~G-ps~t  194 (917)
T 2hg4_A          116 QQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLEG-PAMT  194 (917)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTCCS-CEEE
T ss_pred             HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCCCC-CeEe
Confidence            4569999999999999999999984    88888765542                      1235667899987 9999


Q ss_pred             EeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCCCC
Q psy13271         64 VNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKG  100 (110)
Q Consensus        64 i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s~~  100 (110)
                      ++++|+|++.||+.|++.|++| +|.+|++|+|.++..
T Consensus       195 v~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p  232 (917)
T 2hg4_A          195 VDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSP  232 (917)
T ss_dssp             EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCST
T ss_pred             ecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccCh
Confidence            9999999999999999999999 999999999987653

>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}

Probab=99.51  E-value=5.7e-14  Score=103.25  Aligned_cols=88  Identities=17%  Similarity=0.171  Sum_probs=74.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchh---HHHHHcCC---CCCCeeeEeccchHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQ---RALYQIGM---TGIPVFNVNNNCSTGSSALMLAK   79 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~---~~a~~lg~---~~~~~~~i~~~C~sg~~al~~A~   79 (110)
                      ++++..+|+++|++++|+++|++|++||.|++++.+++...+.   .+...||+   .++.+++++++|++++.||..|.
T Consensus        50 ~~E~~~~ma~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al~~A~  129 (460)
T 2wya_A           50 VQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAA  129 (460)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHHhccCCCCeeEechhhhhhhHHHHHHHHH
Confidence            5789999999999999999999999999999999887665443   34456654   45678999999999999999999


Q ss_pred             HHHHcC-CCeEEEEe
Q psy13271         80 QFIESG-SDCTLALG   93 (110)
Q Consensus        80 ~~i~sG-~~~vlv~g   93 (110)
                      ++|++| .+.++++.
T Consensus       130 ~~i~~g~~~~~lvvv  144 (460)
T 2wya_A          130 NWMESSSWDGRYAMV  144 (460)
T ss_dssp             HHHTSTTCCSCEEEE
T ss_pred             HHHHhccccceEEEE
Confidence            999999 77654443

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.29  E-value=1.4e-11  Score=104.29  Aligned_cols=86  Identities=22%  Similarity=0.359  Sum_probs=73.9

Q ss_pred             HHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCc----------------------chhHHHHHcCCCCCCeeeE
Q psy13271         11 PELAKEALIKALDDAGISINQVQ----QACCGYVYGDST----------------------CGQRALYQIGMTGIPVFNV   64 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~~----------------------~~~~~a~~lg~~~~~~~~i   64 (110)
                      ..|+.+++++||+++|+++++++    +|++|+...++.                      .+.+++..+|+++ |++++
T Consensus        79 ~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l~G-ps~tv  157 (2512)
T 2vz8_A           79 LRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFKG-PSITI  157 (2512)
T ss_dssp             HHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTCCS-CEEEE
T ss_pred             HHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCCCC-Cceee
Confidence            35899999999999999988876    788887654321                      1246778899998 99999


Q ss_pred             eccchHHHHHHHHHHHHHHcC-CCeEEEEeeccC
Q psy13271         65 NNNCSTGSSALMLAKQFIESG-SDCTLALGFEKM   97 (110)
Q Consensus        65 ~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~   97 (110)
                      +++|+|++.||++|++.|++| +|.+|++|++.+
T Consensus       158 ~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~  191 (2512)
T 2vz8_A          158 DTACSSSLLALQSAYQAIRGGECSAAVVGGLNVL  191 (2512)
T ss_dssp             ECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECC
T ss_pred             ccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccc
Confidence            999999999999999999999 999999999974

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.24  E-value=3.1e-11  Score=103.15  Aligned_cols=90  Identities=18%  Similarity=0.250  Sum_probs=73.8

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccC--------eEEEEeecCCCc---------------------------chhHHH-H
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQ--------QACCGYVYGDST---------------------------CGQRAL-Y   52 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id--------~vi~~~~~~~~~---------------------------~~~~~a-~   52 (110)
                      +...|+.+++++||+++|+++++|+        ++++|+..+...                           ....++ .
T Consensus      2646 p~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~ 2725 (3089)
T 3zen_D         2646 RVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQS 2725 (3089)
T ss_dssp             HHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHH
Confidence            4567999999999999999999884        688887654311                           012233 3


Q ss_pred             HcCCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCCC
Q psy13271         53 QIGMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEK   99 (110)
Q Consensus        53 ~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s~   99 (110)
                      .+|+++ |+++++++|+|++.||+.|+++|++| +|.+|++|+|.++.
T Consensus      2726 ~lGl~G-Ps~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~ 2772 (3089)
T 3zen_D         2726 YVGGYG-AMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTL 2772 (3089)
T ss_dssp             TTCCCS-CEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH
T ss_pred             HcCCCC-CceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCH
Confidence            469986 99999999999999999999999999 99999999998764

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.13  E-value=2.9e-11  Score=98.22  Aligned_cols=92  Identities=17%  Similarity=0.291  Sum_probs=73.2

Q ss_pred             HHHHHHHHHHHHHHHcCCC-ccc----cC----eEEEEeecCCCc-----------------------ch----hHHHH-
Q psy13271         10 YPELAKEALIKALDDAGIS-INQ----VQ----QACCGYVYGDST-----------------------CG----QRALY-   52 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~-~~~----id----~vi~~~~~~~~~-----------------------~~----~~~a~-   52 (110)
                      ...|+.+++.+||+++|++ |.+    |+    ++++|+..++..                       ..    ..++. 
T Consensus      1012 ~qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~ 1091 (1688)
T 2pff_A         1012 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1091 (1688)
T ss_dssp             STTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHH
Confidence            3469999999999999998 766    33    667776554411                       01    12344 


Q ss_pred             HcCCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCCCCCC
Q psy13271         53 QIGMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        53 ~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      .+|+++ |+++++++|+|++.||+.|++.|++| +|.+|++|+|.++...+
T Consensus      1092 ~LGl~G-Ps~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~~~ 1141 (1688)
T 2pff_A         1092 LISSSG-PIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGS 1141 (1688)
T ss_dssp             SCCCCC-CCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTTTT
T ss_pred             HcCCcC-CeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHHHH
Confidence            589987 99999999999999999999999999 99999999999876544

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.13  E-value=3.1e-10  Score=93.89  Aligned_cols=89  Identities=18%  Similarity=0.325  Sum_probs=71.3

Q ss_pred             HHHHHHHHHHHHHHHcCC-Cccc----cC----eEEEEeecCCCc---------------------------chhHHHH-
Q psy13271         10 YPELAKEALIKALDDAGI-SINQ----VQ----QACCGYVYGDST---------------------------CGQRALY-   52 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl-~~~~----id----~vi~~~~~~~~~---------------------------~~~~~a~-   52 (110)
                      ...|+.+++.+||+++|+ +|.+    |+    ++++|+..++..                           .+..++. 
T Consensus      1211 ~~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~ 1290 (1887)
T 2uv8_A         1211 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1290 (1887)
T ss_dssp             HHHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHH
Confidence            345899999999999999 4766    44    677777654310                           0123445 


Q ss_pred             HcCCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCCC
Q psy13271         53 QIGMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEK   99 (110)
Q Consensus        53 ~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s~   99 (110)
                      .+|+++ |+++++++|+|++.||+.|++.|++| +|.+|++|+|.++.
T Consensus      1291 ~lgl~G-P~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~ 1337 (1887)
T 2uv8_A         1291 LISSSG-PIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQE 1337 (1887)
T ss_dssp             TTCCCS-CCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH
T ss_pred             HcCCcc-ceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCCh
Confidence            389987 99999999999999999999999999 99999999998654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.10  E-value=4.6e-10  Score=92.83  Aligned_cols=89  Identities=21%  Similarity=0.314  Sum_probs=72.2

Q ss_pred             HHHHHHHHHHHHHHHcCCC-ccc----cC----eEEEEeecCCCc-----------------------ch----hHHHH-
Q psy13271         10 YPELAKEALIKALDDAGIS-INQ----VQ----QACCGYVYGDST-----------------------CG----QRALY-   52 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~-~~~----id----~vi~~~~~~~~~-----------------------~~----~~~a~-   52 (110)
                      ...|+.+++.+||+++|++ |.+    |+    ++++|+..++..                       ..    ..++. 
T Consensus      1186 ~~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~ 1265 (1878)
T 2uv9_A         1186 VTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNML 1265 (1878)
T ss_dssp             HHHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHH
Confidence            3458899999999999998 766    44    788887655410                       11    23445 


Q ss_pred             HcCCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCCC
Q psy13271         53 QIGMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKMEK   99 (110)
Q Consensus        53 ~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s~   99 (110)
                      .+|+++ |++++.++|+|++.+|+.|++.|++| +|.+||+|+|.++.
T Consensus      1266 ~lg~~G-P~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~ 1312 (1878)
T 2uv9_A         1266 LLSSTG-PIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQE 1312 (1878)
T ss_dssp             TCCCCC-CBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCH
T ss_pred             hcCCCC-CeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCCh
Confidence            489987 99999999999999999999999999 99999999998654

>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A

Probab=95.98  E-value=0.027  Score=40.10  Aligned_cols=91  Identities=15%  Similarity=0.226  Sum_probs=52.5

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecC-CCcchhHHHHHcCCCC--------CCeee-------EeccchHH-HHH
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYVYG-DSTCGQRALYQIGMTG--------IPVFN-------VNNNCSTG-SSA   74 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~~~-~~~~~~~~a~~lg~~~--------~~~~~-------i~~~C~sg-~~a   74 (110)
                      ..+.+++.+.|+++|++++|+|.|+.+.... ....-..+.+.+|+.-        ...|+       =..||+.. ..-
T Consensus       207 PaA~~ti~~~l~d~g~~~~d~D~ivtgdL~q~g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~v~  286 (347)
T 3lma_A          207 PAAADTIKQHLEDLGRTPDDYDLILTGDLSGVGSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSAVVT  286 (347)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCSEEEEESCHHHHHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCHHHcCEEecCChHHHHHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHHHHH
Confidence            3456677999999999999999999753210 0001112344445421        11222       12233333 333


Q ss_pred             HHHHHHHHHcC-CCeEEEEeecc-CCCCCC
Q psy13271         75 LMLAKQFIESG-SDCTLALGFEK-MEKGSL  102 (110)
Q Consensus        75 l~~A~~~i~sG-~~~vlv~g~e~-~s~~~~  102 (110)
                      -.+-...++.| .+++|+++.-. +|+..+
T Consensus       287 ~~~~~~~~~~g~~~ril~~~tGalls~~~~  316 (347)
T 3lma_A          287 FAHIFKEIEAGRLNRVLVVATGALLSPTII  316 (347)
T ss_dssp             HHTHHHHHHTTSCSEEEEEEEEECCCHHHH
T ss_pred             HHHHHHHHhcCcccEEEEEecccccCcchh
Confidence            35567789999 99999988766 554443

>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*

Probab=95.77  E-value=0.053  Score=37.30  Aligned_cols=79  Identities=15%  Similarity=0.074  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCCCeee----E-eccchHHHHHHHHHHHHHHcC-C
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVFN----V-NNNCSTGSSALMLAKQFIESG-S   86 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~~~~----i-~~~C~sg~~al~~A~~~i~sG-~   86 (110)
                      ...++++++|+++|++++|||.++.-..  .......+.+.+|+.......    + +..+++...+|..+   ++.| .
T Consensus       219 ~~~~~i~~aL~~agl~~~did~v~~H~~--~~~~~d~i~~~lg~~~~~~~~~~~~~Gn~~~As~~~~L~~~---~~~~~~  293 (317)
T 1hnj_A          219 ELAHIVDETLAANNLDRSQLDWLVPHQA--NLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEA---VRDGRI  293 (317)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEEECCS--CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HHTTCS
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEEcCC--CHHHHHHHHHHcCCCHHHhHhhHhhhCcHHHHHHHHHHHHH---HHhCCC
Confidence            4567889999999999999999876432  111234567778885312221    1 45666666666544   4444 3


Q ss_pred             ---CeEEEEeecc
Q psy13271         87 ---DCTLALGFEK   96 (110)
Q Consensus        87 ---~~vlv~g~e~   96 (110)
                         +++|+++.-.
T Consensus       294 ~~G~~vll~~~G~  306 (317)
T 1hnj_A          294 KPGQLVLLEAFGG  306 (317)
T ss_dssp             CTTCEEEEEEEET
T ss_pred             CCCCEEEEEEEch
Confidence               7888777543

>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A

Probab=95.65  E-value=0.06  Score=36.92  Aligned_cols=80  Identities=11%  Similarity=0.163  Sum_probs=49.1

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC--CCeeeE----eccchHHHHHHHHHHHHHHcC-
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG--IPVFNV----NNNCSTGSSALMLAKQFIESG-   85 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~--~~~~~i----~~~C~sg~~al~~A~~~i~sG-   85 (110)
                      ...++++++|+++|++++|||.++.-..  .......+.+.||+..  .+ ...    +..++++..+|..+.+.-+.. 
T Consensus       213 ~~~~~i~~al~~agl~~~did~~~~H~~--~~~~~d~~~~~lg~~~~~~~-~~~~~~Gh~~~as~~~~L~~~~~~~~~~~  289 (313)
T 1zow_A          213 IMGDASTRVVEKANLTSDDIDLFIPHQA--NIRIMESARERLGISKDKMS-VSVNKYGNTSAASIPLSIDQELKNGKLKD  289 (313)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCSEEEECCS--CHHHHHHHHHHHTCCGGGBC-CCHHHHCBCGGGHHHHHHHHHHHTTCCCT
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEEcCC--CHHHHHHHHHHhCCCHHHHH-HhHhhhCchHHHHHHHHHHHHHHcCCCCC
Confidence            4567889999999999999999876432  1112234567788742  22 112    456667776665543321122 


Q ss_pred             CCeEEEEeec
Q psy13271         86 SDCTLALGFE   95 (110)
Q Consensus        86 ~~~vlv~g~e   95 (110)
                      -+++|+.+.-
T Consensus       290 g~~vl~~~~G  299 (313)
T 1zow_A          290 DDTIVLVGFG  299 (313)
T ss_dssp             TCEEEEEEEE
T ss_pred             CCEEEEEEEc
Confidence            3778877654

>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2

Probab=95.59  E-value=0.072  Score=37.12  Aligned_cols=83  Identities=16%  Similarity=0.087  Sum_probs=50.2

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCC-Cee-e---E-eccchHHHHHHHHHHHHHHcC
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGI-PVF-N---V-NNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~-~~~-~---i-~~~C~sg~~al~~A~~~i~sG   85 (110)
                      +...++++++|+++|++++|||.++....  .......+.+.+|+..- ... .   + +..+++...+|..+.+.=+-.
T Consensus       231 ~~~~~~i~~aL~~agl~~~did~v~~H~~--~~~~~d~i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~~~~~~g~~~  308 (339)
T 1mzj_A          231 ADVVPAAREALEVAGLTVGDLVAFVPHQA--NLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRLVRSGAVP  308 (339)
T ss_dssp             HHHHHHHHHHHHTTTCCGGGCSEEEECCS--CHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHHHHHTSSC
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEECCC--CHHHHHHHHHHhCCCccceeeehhhhcCchHHHHHHHHHHHHHHcCCCC
Confidence            45667889999999999999999876432  11223456778888532 111 1   1 355566666665443321112


Q ss_pred             -CCeEEEEeecc
Q psy13271         86 -SDCTLALGFEK   96 (110)
Q Consensus        86 -~~~vlv~g~e~   96 (110)
                       -+++|+.+.-.
T Consensus       309 ~G~~vll~~~G~  320 (339)
T 1mzj_A          309 GGGPALMIGFGA  320 (339)
T ss_dssp             TTCEEEEEEEET
T ss_pred             CCCEEEEEEEch
Confidence             36788776543

>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}

Probab=95.45  E-value=0.075  Score=36.33  Aligned_cols=78  Identities=19%  Similarity=0.173  Sum_probs=49.2

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCCCee-eE----eccchHHHHHHHHHHHHHHcC--
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVF-NV----NNNCSTGSSALMLAKQFIESG--   85 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~~~-~i----~~~C~sg~~al~~A~~~i~sG--   85 (110)
                      ...++++++|+++|++++|||.++.....  ......+.+.+|+...... ..    +..++++..+|..+.   +.|  
T Consensus       211 ~~~~~i~~al~~agl~~~did~~~~H~~~--~~~~~~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~L~~~~---~~g~~  285 (309)
T 2ebd_A          211 SMEEVCREVLEKAGVKPEEVSLVIPHQAN--VRIINALAEKLNIPKEKVFVNIQKYGNTSAASIPIALHEAI---KEGKV  285 (309)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCSEEEECCSC--HHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHH---HTTCC
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEEcCCC--HHHHHHHHHHhCCCHHHhhhhHhhhcchHHHHHHHHHHHHH---HcCCC
Confidence            45678899999999999999988764321  1112346677888421111 11    456677777765553   444  


Q ss_pred             --CCeEEEEeec
Q psy13271         86 --SDCTLALGFE   95 (110)
Q Consensus        86 --~~~vlv~g~e   95 (110)
                        -+++|+.+.-
T Consensus       286 ~~G~~~l~~~~G  297 (309)
T 2ebd_A          286 KRGDLILMTAMG  297 (309)
T ss_dssp             CTTCEEEEEEEE
T ss_pred             CCCCEEEEEEEc
Confidence              3678877654

>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2

Probab=95.45  E-value=0.083  Score=36.41  Aligned_cols=79  Identities=19%  Similarity=0.211  Sum_probs=49.1

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCCCeee----E-eccchHHHHHHHHHHHHHHcC-
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVFN----V-NNNCSTGSSALMLAKQFIESG-   85 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~~~~----i-~~~C~sg~~al~~A~~~i~sG-   85 (110)
                      +...++++++|+++|++++|||.++.....  ......+.+.+|+..-....    + +..++++..++..+   ++.| 
T Consensus       220 ~~~~~~i~~al~~agl~~~did~~~~H~~~--~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~l~~~---l~~g~  294 (322)
T 1ub7_A          220 RVMNTATLEAIEKAGLTPEDIRLFVPHQAN--LRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKEA---VDAGR  294 (322)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCSEEEECCSC--HHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HHHTS
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEEcCCC--HHHHHHHHHHcCCCHHHHHHHHHhhCcHHHHHHHHHHHHH---HHhCC
Confidence            456678899999999999999998764321  11223466778874211111    1 45666666666544   4444 


Q ss_pred             ---CCeEEEEeec
Q psy13271         86 ---SDCTLALGFE   95 (110)
Q Consensus        86 ---~~~vlv~g~e   95 (110)
                         -+++|+.+.-
T Consensus       295 ~~~g~~~l~~~~G  307 (322)
T 1ub7_A          295 IREGDHVLLVSFG  307 (322)
T ss_dssp             SCTTCEEEEEEEE
T ss_pred             CCCCCEEEEEEEC
Confidence               3678877654

>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}

Probab=95.39  E-value=0.076  Score=36.87  Aligned_cols=80  Identities=15%  Similarity=0.169  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC-CCeeeE----eccchHHHHHHHHHHHHHHcC-
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG-IPVFNV----NNNCSTGSSALMLAKQFIESG-   85 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~-~~~~~i----~~~C~sg~~al~~A~~~i~sG-   85 (110)
                      +...++++++|+++|++++|||.++....  .......+.+.||+.. .....+    ++.+++...+|..+   ++.| 
T Consensus       224 ~~~~~~i~~aL~~agl~~~did~~~~H~~--~~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~~~~~  298 (331)
T 2x3e_A          224 TQMSDSVRRVLDRVGWQASDLHHLVPHQA--NTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHG---LRQGI  298 (331)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCSEEEECCC--CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HHTTC
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEEcCC--CHHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHHHH---HHhCC
Confidence            45667889999999999999999876332  1112345677888842 111122    45566666666544   4444 


Q ss_pred             ---CCeEEEEeecc
Q psy13271         86 ---SDCTLALGFEK   96 (110)
Q Consensus        86 ---~~~vlv~g~e~   96 (110)
                         -+++|+.+.-.
T Consensus       299 ~~~G~~vll~~~G~  312 (331)
T 2x3e_A          299 LRDGGNMVLTGFGA  312 (331)
T ss_dssp             SCTTCEEEEEEEET
T ss_pred             CCCCCEEEEEEEeH
Confidence               36788776543

>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A

Probab=95.33  E-value=0.15  Score=35.21  Aligned_cols=81  Identities=15%  Similarity=0.123  Sum_probs=48.6

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCC-Cee-eE----eccchHHHHHHHHHHHHHHcC-
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGI-PVF-NV----NNNCSTGSSALMLAKQFIESG-   85 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~-~~~-~i----~~~C~sg~~al~~A~~~i~sG-   85 (110)
                      ...++++++|+++|++++|||.++.-...  ......+.+.||+... ... .+    ++.+++...+|..+...-+.. 
T Consensus       233 ~~~~~i~~al~~agl~~~dId~~~~H~~~--~~~~~~~~~~lg~~~~~~~~~~~~~~Gnt~sAs~~~~L~~~~~~~~~~~  310 (335)
T 1u6e_A          233 KMGDVGRRAMDAAGVRPDQIDVFVPHQAN--SRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTTGAAKP  310 (335)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCCEEEECCSC--HHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHHHTSSCT
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEECCCC--HHHHHHHHHHcCCCchhhhhhhhhhhCcHHHHHHHHHHHHHHHcCCCCC
Confidence            55678899999999999999998764321  1123346677888532 111 11    345555555555443322223 


Q ss_pred             CCeEEEEeec
Q psy13271         86 SDCTLALGFE   95 (110)
Q Consensus        86 ~~~vlv~g~e   95 (110)
                      -+++|+.+.-
T Consensus       311 g~~~l~~~~G  320 (335)
T 1u6e_A          311 GDLALLIGYG  320 (335)
T ss_dssp             TCEEEEEEEE
T ss_pred             CCEEEEEEEe
Confidence            4688877654

>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*

Probab=95.22  E-value=0.061  Score=38.11  Aligned_cols=79  Identities=14%  Similarity=0.160  Sum_probs=50.7

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC-CCeeeE----eccchHHHHHHHHHHHHHHcCCC
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG-IPVFNV----NNNCSTGSSALMLAKQFIESGSD   87 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~-~~~~~i----~~~C~sg~~al~~A~~~i~sG~~   87 (110)
                      ...++++++|+++|++++|||.++.-..  ....-..+++.||+.. .....+    ++++++-..+|..+.+.++.| |
T Consensus       255 ~~~~~i~~~L~~~gl~~~did~~v~Hq~--n~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sAsi~l~L~~~~~~l~~G-d  331 (359)
T 3h78_A          255 TLVRIAGEMLAAHELTLDDIDHVICHQP--NLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLAMFWPDIQPG-Q  331 (359)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCSEEEECCS--CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHGGGSCTT-C
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEECCC--CHHHHHHHHHHhCcCHHHhhhhhhcccchHHHHHHHHHHHHHHhCCCC-C
Confidence            4557788999999999999999876332  1222345677888853 111122    456666677777666554444 6


Q ss_pred             eEEEEee
Q psy13271         88 CTLALGF   94 (110)
Q Consensus        88 ~vlv~g~   94 (110)
                      .+|+++.
T Consensus       332 ~vll~~f  338 (359)
T 3h78_A          332 RVLVLTY  338 (359)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEE
Confidence            6776654

>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}

Probab=94.78  E-value=0.17  Score=35.25  Aligned_cols=79  Identities=19%  Similarity=0.231  Sum_probs=47.8

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCCCe-eeE----eccchHHHHHHHHHHHHHHcC-
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPV-FNV----NNNCSTGSSALMLAKQFIESG-   85 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~~-~~i----~~~C~sg~~al~~A~~~i~sG-   85 (110)
                      +...++++++|+++|++++|||.++.-..  ....-..+.+.||+..-.. ..+    ++.+++-..+|..+   ++.| 
T Consensus       234 ~~~~~~i~~~l~~~gl~~~did~~~~Hq~--~~~i~~~~~~~lgl~~~~~~~~l~~~GNt~sasi~~~L~~~---~~~g~  308 (333)
T 4dfe_A          234 NVLEKVAVEALEKANLSAEQIDWLIPHQA--NIRIMQSTCRKLGLPQERMIVTVGEHGNTSAASIPLALDVA---VRDGR  308 (333)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGCSEEEECCS--CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HHTTC
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEEcCC--CHHHHHHHHHHhCCCHHHhhhhHHhcCchHHHHHHHHHHHH---HHcCC
Confidence            44567788999999999999998876332  1222345677888853111 222    34455555555443   4444 


Q ss_pred             C---CeEEEEeec
Q psy13271         86 S---DCTLALGFE   95 (110)
Q Consensus        86 ~---~~vlv~g~e   95 (110)
                      .   |.+|+++.-
T Consensus       309 ~~~Gd~vll~~~G  321 (333)
T 4dfe_A          309 IKRGQNVLIEGVG  321 (333)
T ss_dssp             SCTTCEEEEEEEE
T ss_pred             CCCCCEEEEEEEc
Confidence            2   677776643

>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=94.67  E-value=0.27  Score=35.16  Aligned_cols=75  Identities=17%  Similarity=0.125  Sum_probs=50.5

Q ss_pred             HHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHH--HHHcCC--CCCCeee------E-eccchHHHHHHHHHHHHHH
Q psy13271         15 KEALIKALDDAGISINQVQQACCGYVYGDSTCGQRA--LYQIGM--TGIPVFN------V-NNNCSTGSSALMLAKQFIE   83 (110)
Q Consensus        15 ~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~--a~~lg~--~~~~~~~------i-~~~C~sg~~al~~A~~~i~   83 (110)
                      ..+++++|+++|++++|||.+=+.    +.+....+  .+.||+  .+.+...      + ....++|...+..+...++
T Consensus       299 ~~a~~~al~~Agl~~~dId~ie~h----eafa~~~l~~~~~lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~  374 (401)
T 1ulq_A          299 VPATRKALERAGLSFSDLGLIELN----EAFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMR  374 (401)
T ss_dssp             HHHHHHHHHHTTCCGGGCSEEEEC----CSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHcCEEEEe----cchHHHHHHHHHHcCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHh
Confidence            678999999999999999988653    33222322  244777  3222211      1 2345677888888888898


Q ss_pred             cC-CCeEEEEe
Q psy13271         84 SG-SDCTLALG   93 (110)
Q Consensus        84 sG-~~~vlv~g   93 (110)
                      .+ .++.|+..
T Consensus       375 ~~~~~~gl~~~  385 (401)
T 1ulq_A          375 RRKVQFGLATM  385 (401)
T ss_dssp             HTTCSEEEEEE
T ss_pred             hcCCCEEEEEe
Confidence            88 88888653

>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A

Probab=94.62  E-value=0.2  Score=35.05  Aligned_cols=81  Identities=19%  Similarity=0.205  Sum_probs=50.0

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCCCe-eeE----eccchHHHHHHHHHHHH--HHcC
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPV-FNV----NNNCSTGSSALMLAKQF--IESG   85 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~~-~~i----~~~C~sg~~al~~A~~~--i~sG   85 (110)
                      ...++++++|+++|++++|||.++.-..  ....-..+.+.||+..-.. ..+    ++++++-..+|..+.+.  ++.|
T Consensus       247 ~~~~~i~~~l~~~gl~~~did~~v~Hq~--~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g~~~~G  324 (345)
T 3s21_A          247 LAQKTFVAAKQVLGWAVEELDQFVIHQV--SRPHTAAFVKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLKELGRLKKG  324 (345)
T ss_dssp             HHHHHHHHHHHHHCCCGGGCSEEEECCS--CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHTCCCTT
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEeCCC--CHHHHHHHHHHcCcCHHHceeeHhhcCchHHHHHHHHHHHHHHcCCCCCC
Confidence            4456778999999999999999886332  1222345677889853111 222    45566666666655543  3333


Q ss_pred             CCeEEEEeecc
Q psy13271         86 SDCTLALGFEK   96 (110)
Q Consensus        86 ~~~vlv~g~e~   96 (110)
                       |.+++++.-.
T Consensus       325 -d~vll~~~G~  334 (345)
T 3s21_A          325 -DRIALLGIGS  334 (345)
T ss_dssp             -CEEEEEEEET
T ss_pred             -CEEEEEEECh
Confidence             6777776543

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}

Probab=94.29  E-value=0.17  Score=36.18  Aligned_cols=74  Identities=18%  Similarity=0.180  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHcCCCccccCeEEEEeecCCCcch--hHHHHHcCCCCCCe--ee----E-eccchHHHHHHHHHHHHHHcC
Q psy13271         15 KEALIKALDDAGISINQVQQACCGYVYGDSTCG--QRALYQIGMTGIPV--FN----V-NNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus        15 ~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~--~~~a~~lg~~~~~~--~~----i-~~~C~sg~~al~~A~~~i~sG   85 (110)
                      ..+++++|+++|++++|||.+.+.    +.+..  ..+.+.||+...+.  ..    + +...++|...+..+...++..
T Consensus       297 ~~ai~~al~~agl~~~dId~ve~~----d~fa~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~  372 (395)
T 4e1l_A          297 IPATRKALKKAGLSINDIDLIEAN----EAFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKR  372 (395)
T ss_dssp             HHHHHHHHHHTTCCGGGCSEEEEC----CSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHcCEEEec----ChhHHHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhc
Confidence            467899999999999999999863    33222  23456677743121  11    1 123466777777777777766


Q ss_pred             -CCeEEEE
Q psy13271         86 -SDCTLAL   92 (110)
Q Consensus        86 -~~~vlv~   92 (110)
                       .++.|+.
T Consensus       373 ~~~~gl~~  380 (395)
T 4e1l_A          373 KVETGLAT  380 (395)
T ss_dssp             TCSEEEEE
T ss_pred             CCCEEEEE
Confidence             7776653

>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A

Probab=94.26  E-value=0.2  Score=35.41  Aligned_cols=79  Identities=16%  Similarity=0.010  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC-CCeeeE----eccchHHHHHHHHHHHHHHcC-
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG-IPVFNV----NNNCSTGSSALMLAKQFIESG-   85 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~-~~~~~i----~~~C~sg~~al~~A~~~i~sG-   85 (110)
                      +...++++++|+++|++++|||.++.-..  ....-..+++.||+.. .....+    ++.+++-..+|..   +++.| 
T Consensus       266 ~~~~~~i~~~L~~~gl~~~did~~v~Hq~--n~~i~~~~~~~Lgl~~ek~~~~l~~~GNtssAsipl~L~~---~~~~g~  340 (365)
T 3gwa_A          266 AEVPRAADRLLALAGEPRENIDCFVLHQA--NRFMLDALRKKMKIPEHKFPVLMEHCGNTVSSTLPLALET---MRANGT  340 (365)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCSEEEECCC--CHHHHHHHHHHHTCCGGGSCCCCTTTCBCGGGHHHHHHHH---HHHTTC
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEEcCC--CHHHHHHHHHHhCCCHHHHHHHHhcccchHHHHHHHHHHH---HHHcCC
Confidence            34457788999999999999999886332  2222346777888853 111222    3444444444443   44555 


Q ss_pred             C---CeEEEEeec
Q psy13271         86 S---DCTLALGFE   95 (110)
Q Consensus        86 ~---~~vlv~g~e   95 (110)
                      .   |.+|+++.-
T Consensus       341 ~~~Gd~vll~~fG  353 (365)
T 3gwa_A          341 LARGMRLMLLGFG  353 (365)
T ss_dssp             CCTTCEEEEEEEE
T ss_pred             CCCCCEEEEEEEe
Confidence            3   677777654

>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}

Probab=94.16  E-value=0.21  Score=35.16  Aligned_cols=81  Identities=14%  Similarity=0.107  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC-CCeeeE----eccchHHHHHHHHHHH--HHHc
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG-IPVFNV----NNNCSTGSSALMLAKQ--FIES   84 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~-~~~~~i----~~~C~sg~~al~~A~~--~i~s   84 (110)
                      +...++++++|+++|++++|||.++.-..  ....-..+.+.||+.. .....+    ++++++-..+|..+.+  .++.
T Consensus       244 ~~~~~~i~~~l~~~gl~~~did~~v~Hq~--~~~i~~~~~~~Lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g~~~~  321 (354)
T 4efi_A          244 NAVPKLVSRTLDIAGRDKDSYDAFLFHQA--NLFMLKHLAKKAGLPAERVPVNIGEYGNTSCASIPLLITTELKDRLKEE  321 (354)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCSEEEECCC--CHHHHHHHHHHTTCCGGGSCCCHHHHCBCGGGHHHHHHHHHSHHHHHHS
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEeCCC--CHHHHHHHHHHhCcCHHHHHHHHhhhCcHHHHHHHHHHHHHHHhCCCCC
Confidence            45566788999999999999999886432  2222345778899853 111222    4566666667766543  3455


Q ss_pred             CCCeEEEEeec
Q psy13271         85 GSDCTLALGFE   95 (110)
Q Consensus        85 G~~~vlv~g~e   95 (110)
                      | |.+|+++.-
T Consensus       322 G-d~vll~~fG  331 (354)
T 4efi_A          322 T-LQLGMFGFG  331 (354)
T ss_dssp             C-EEEEEEEEE
T ss_pred             C-CEEEEEEEc
Confidence            5 667766644

>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A

Probab=94.13  E-value=0.22  Score=35.61  Aligned_cols=75  Identities=16%  Similarity=0.157  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH--HHHHcCCCCCCee------eE-eccchHHHHHHHHHHHHHHc
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQR--ALYQIGMTGIPVF------NV-NNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~--~a~~lg~~~~~~~------~i-~~~C~sg~~al~~A~~~i~s   84 (110)
                      ...+++++|+++|++++|||.+-+.    +.+....  +.+.||+...+..      .+ ....++|...+..+...++.
T Consensus       297 ~~~a~~~al~~Agl~~~dId~ie~~----d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~  372 (397)
T 1wl4_A          297 PIPAIKQAVTKAGWSLEDVDIFEIN----EAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLER  372 (397)
T ss_dssp             HHHHHHHHHHHHTCCGGGCCEEEEC----CSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEEe----cccHHHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhh
Confidence            3578999999999999999998753    3333322  4456776421111      11 23456777778778888887


Q ss_pred             C-CCeEEEE
Q psy13271         85 G-SDCTLAL   92 (110)
Q Consensus        85 G-~~~vlv~   92 (110)
                      . .++.|+.
T Consensus       373 ~~~~~gl~~  381 (397)
T 1wl4_A          373 MGRSRGVAA  381 (397)
T ss_dssp             HTCCEEEEE
T ss_pred             cCCCEEEEE
Confidence            7 8887764

>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...

Probab=94.11  E-value=0.21  Score=35.57  Aligned_cols=73  Identities=19%  Similarity=0.141  Sum_probs=50.2

Q ss_pred             HHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH--HHHHcCCCCCCe------eeE-eccchHHHHHHHHHHHHHHcC
Q psy13271         15 KEALIKALDDAGISINQVQQACCGYVYGDSTCGQR--ALYQIGMTGIPV------FNV-NNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus        15 ~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~--~a~~lg~~~~~~------~~i-~~~C~sg~~al~~A~~~i~sG   85 (110)
                      ..+++++|+++|++++|||.+-+.    +.+....  +.+.||+...+.      ..+ ...+++|...+..+...++.+
T Consensus       293 ~~a~~~al~~agl~~~dId~ie~~----d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~  368 (392)
T 2vu1_A          293 IPASRKALERAGWKIGDLDLVEAN----EAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR  368 (392)
T ss_dssp             HHHHHHHHHHHTCCGGGCSEEEEC----CSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHcCEEEec----cccHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhcc
Confidence            578999999999999999998753    4333333  345677742121      112 245567888888888888877


Q ss_pred             -CCeEEE
Q psy13271         86 -SDCTLA   91 (110)
Q Consensus        86 -~~~vlv   91 (110)
                       .++.|+
T Consensus       369 ~~~~gl~  375 (392)
T 2vu1_A          369 GARKGLA  375 (392)
T ss_dssp             TCSEEEE
T ss_pred             CCCEEEE
Confidence             888876

>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}

Probab=93.88  E-value=0.2  Score=35.77  Aligned_cols=74  Identities=11%  Similarity=0.062  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHcCCCccccCeEEEEeecCCCcch--hHHHHHcCCCCCCee--e----E-eccchHHHHHHHHHHHHHHcC
Q psy13271         15 KEALIKALDDAGISINQVQQACCGYVYGDSTCG--QRALYQIGMTGIPVF--N----V-NNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus        15 ~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~--~~~a~~lg~~~~~~~--~----i-~~~C~sg~~al~~A~~~i~sG   85 (110)
                      ..+++++|+++|++++|||.+-+.    +.+..  ..+.+.||+...+..  .    + +...++|...+..+...++..
T Consensus       295 ~~a~~~al~~agl~~~dId~ve~~----d~fa~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~  370 (394)
T 3ss6_A          295 APAIRKGLEKVDWSLEDADLLEIN----EAFAAQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRR  370 (394)
T ss_dssp             HHHHHHHHHHHTCCGGGCSEEEEC----CSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHcCEEEeC----CchHHHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhc
Confidence            678899999999999999999853    33222  234466777431211  1    1 233456777777777777766


Q ss_pred             -CCeEEEE
Q psy13271         86 -SDCTLAL   92 (110)
Q Consensus        86 -~~~vlv~   92 (110)
                       .++.|+.
T Consensus       371 ~~~~gl~~  378 (394)
T 3ss6_A          371 GLEKGIAS  378 (394)
T ss_dssp             TCCEEEEE
T ss_pred             CCCEEEEE
Confidence             7777653

>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}

Probab=93.68  E-value=0.36  Score=33.58  Aligned_cols=78  Identities=17%  Similarity=0.075  Sum_probs=47.4

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC-CCeeeE----eccchHHHHHHHHHHHHHHcC-C
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG-IPVFNV----NNNCSTGSSALMLAKQFIESG-S   86 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~-~~~~~i----~~~C~sg~~al~~A~~~i~sG-~   86 (110)
                      ...++++++|+++|++++|||.++.-..  ....-..+.+.||+.. .....+    ++++++-..+|..+   ++.| .
T Consensus       225 ~~~~~i~~~l~~~gl~~~did~~v~Hq~--~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~---~~~g~~  299 (323)
T 3il3_A          225 ELSNVVEETLLANNLDKKDLDWLVPHQA--NLRIITATAKKLEMDMSQVVVTLDKYANNSAATVPVALDEA---IRDGRI  299 (323)
T ss_dssp             HHHHHHHHHHHTTTCCTTTCCEEEECCS--CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HHTTSS
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEEcCC--CHHHHHHHHHHcCcCHHHhhccHhhcCchHHHHHHHHHHHH---HHcCCC
Confidence            4456788999999999999998876332  1222345677889853 111223    34555555555444   4444 2


Q ss_pred             ---CeEEEEeec
Q psy13271         87 ---DCTLALGFE   95 (110)
Q Consensus        87 ---~~vlv~g~e   95 (110)
                         |.+++++.-
T Consensus       300 ~~Gd~vll~~~G  311 (323)
T 3il3_A          300 QRGQLLLLEAFG  311 (323)
T ss_dssp             CTTCEEEEEEEE
T ss_pred             CCCCEEEEEEEe
Confidence               677776653

>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}

Probab=93.55  E-value=0.32  Score=34.79  Aligned_cols=75  Identities=16%  Similarity=0.162  Sum_probs=48.5

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchh--HHHHHcCCCCCCee--e----E-eccchHHHHHHHHHHHHHHc
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQ--RALYQIGMTGIPVF--N----V-NNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~--~~a~~lg~~~~~~~--~----i-~~~C~sg~~al~~A~~~i~s   84 (110)
                      ...+++++|+++|++++|||.+-+.    +.+...  .+.+.+|+...+..  .    + ....++|+..+..+...++.
T Consensus       297 ~~~a~~~al~~Agl~~~dId~ve~~----d~f~~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~  372 (396)
T 4dd5_A          297 PVPATKKALEAANMTIEDIDLVEAN----EAFAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKR  372 (396)
T ss_dssp             HHHHHHHHHHHHTCCGGGCSEEEEC----CSBHHHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCHHHcCEEEec----ChHHHHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHh
Confidence            3678899999999999999998753    332222  23456777432211  1    1 12345677777777777777


Q ss_pred             C-CCeEEEE
Q psy13271         85 G-SDCTLAL   92 (110)
Q Consensus        85 G-~~~vlv~   92 (110)
                      . .++.|+.
T Consensus       373 ~~~~~gl~~  381 (396)
T 4dd5_A          373 RDAKTGLAT  381 (396)
T ss_dssp             HTCSEEEEE
T ss_pred             cCCCeEEEE
Confidence            6 7777754

>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A

Probab=93.48  E-value=0.23  Score=35.42  Aligned_cols=79  Identities=11%  Similarity=0.107  Sum_probs=46.0

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCCCee-------eEe-ccchHHHHHHHHHHHHHHc
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVF-------NVN-NNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~~~-------~i~-~~C~sg~~al~~A~~~i~s   84 (110)
                      ...++++++|+++|++++|||.++....  .......+.+.||+..-...       ..+ +.+++-..+|   ..+++.
T Consensus       288 ~~~~~i~~aL~~agl~~~dId~~~~H~~--~~~i~d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L---~~~~~~  362 (393)
T 1ted_A          288 GVAPVVTEMLWDNGLQISDIDLWAIHPG--GPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVL---ETMVQQ  362 (393)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCSCEEECCS--CHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHH---HHHHHS
T ss_pred             HHHHHHHHHHHHcCCCHhHCCEEEECCC--cHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHH---HHHHhc
Confidence            4556789999999999999998876332  11122356677888531111       122 2223333333   344566


Q ss_pred             C-C----CeEEEEeecc
Q psy13271         85 G-S----DCTLALGFEK   96 (110)
Q Consensus        85 G-~----~~vlv~g~e~   96 (110)
                      | .    +.+|+++.-.
T Consensus       363 g~~~~~Gd~vll~~~G~  379 (393)
T 1ted_A          363 AESAKAISTGVAFAFGP  379 (393)
T ss_dssp             CSSSSSSEEEEEEEEET
T ss_pred             CccCCCCCeEEEEEecc
Confidence            6 5    6777776543

>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}

Probab=93.30  E-value=0.56  Score=32.70  Aligned_cols=80  Identities=18%  Similarity=0.137  Sum_probs=48.1

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCCCee--eE----eccchHHHHHHHHHHHH--HHc
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVF--NV----NNNCSTGSSALMLAKQF--IES   84 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~~~--~i----~~~C~sg~~al~~A~~~--i~s   84 (110)
                      ...++++++|+++|++++|||.++.-..  ....-..+.+.||+..-..+  .+    |++++|-..+|..+.+.  ++.
T Consensus       250 ~~~~~i~~~L~~~gl~~~did~~v~Hq~--~~~i~~~~~~~Lgl~~~~~~~~~l~~~GNtssasi~~~L~~~~~~g~~~~  327 (350)
T 4ewp_A          250 SMAKVAREALDAAGVEPEDLAAFIPHQA--NMRIIDEFAKQLKLPESVVVARDIADAGNTSAASIPLAMHRLLEENPELS  327 (350)
T ss_dssp             THHHHHHHHHHHHTCCGGGEEEEEECCS--CHHHHHHHHHHTTCCTTSEECCTHHHHCBCGGGHHHHHHHHHHHHCGGGT
T ss_pred             hhhHHHHHHHHhhcCChhHhceEEecCC--CHHHHHHHHHHcCcChHhEEecccccccchHHHHHHHHHHHHHHhCCCCC
Confidence            3456788999999999999999875321  12223457788998532222  22    34455555555544432  333


Q ss_pred             CCCeEEEEeec
Q psy13271         85 GSDCTLALGFE   95 (110)
Q Consensus        85 G~~~vlv~g~e   95 (110)
                      | |.++.++.-
T Consensus       328 G-d~vll~~fG  337 (350)
T 4ewp_A          328 G-GLALQIGFG  337 (350)
T ss_dssp             T-SEEEEEEEE
T ss_pred             c-CEEEEEEEc
Confidence            3 677766643

>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*

Probab=93.23  E-value=0.14  Score=36.51  Aligned_cols=72  Identities=10%  Similarity=0.027  Sum_probs=45.9

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHH--HcCCCCCCee------eE-eccchHHHHHHHHHHHHHHc
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALY--QIGMTGIPVF------NV-NNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~--~lg~~~~~~~------~i-~~~C~sg~~al~~A~~~i~s   84 (110)
                      ...+++++|+++|++++|||.+-+.    +.+....+..  .||+...+..      .+ ....++|...+..+...++.
T Consensus       297 ~~~a~~~al~~Agl~~~dId~ie~~----D~f~~~~l~~~e~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~  372 (395)
T 2ib8_A          297 PVYAASMVLKDVGLKKEDIAMWEVN----EAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ  372 (395)
T ss_dssp             HHHHHHHHHHHHTCCGGGEEEEEEC----CSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHcCCCHHHcCEEEEc----cccHHHHHHHHHHcCCCccccCCCcchhhcCCChhHHHHHHHHHHHHHHhh
Confidence            4678999999999999999998753    4443344443  3777431211      11 22345677777777777777


Q ss_pred             C-CCeE
Q psy13271         85 G-SDCT   89 (110)
Q Consensus        85 G-~~~v   89 (110)
                      | ...+
T Consensus       373 ~~~gl~  378 (395)
T 2ib8_A          373 GEYGLA  378 (395)
T ss_dssp             TCEEEE
T ss_pred             CCceEE
Confidence            7 5444

>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2

Probab=93.07  E-value=0.7  Score=28.79  Aligned_cols=48  Identities=17%  Similarity=0.211  Sum_probs=35.2

Q ss_pred             HHHHHHHHcCCCccccCeEEEEeecCC--CcchhHHHHHcCCCCCCeeeEe
Q psy13271         17 ALIKALDDAGISINQVQQACCGYVYGD--STCGQRALYQIGMTGIPVFNVN   65 (110)
Q Consensus        17 a~~~al~~agl~~~~id~vi~~~~~~~--~~~~~~~a~~lg~~~~~~~~i~   65 (110)
                      -..+.+++.+|+++||-.|++. .++|  ..+|+.+++.+|+..+|.+...
T Consensus        56 Ll~eii~~N~l~~eDIvSv~FT-vT~DL~A~FPA~aaR~~Gw~~VPLmc~q  105 (148)
T 1xho_A           56 LLKEMAEKNGLEEDDIISIIFT-VTKDLDAAFPAIAARNMGWTSTALMCMN  105 (148)
T ss_dssp             HHHHHHHHTTCCGGGEEEEEEE-ECTTCCSSCTHHHHHHTTCTTSEEEEEE
T ss_pred             HHHHHHHHcCCCHHHEEEEEEE-eCCccCccChHHHHHHcCCCccchhhcc
Confidence            3455667889999999888874 4455  3467888888899888866543

>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}

Probab=92.71  E-value=0.58  Score=36.98  Aligned_cols=71  Identities=13%  Similarity=-0.083  Sum_probs=48.8

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC-CCeee-------EeccchHHHHHHHHHHHHHHc
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG-IPVFN-------VNNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~-~~~~~-------i~~~C~sg~~al~~A~~~i~s   84 (110)
                      ...++++++|+++|++++|||.++.-..  .......+.+.||+.. ....+       =|+.++|-..+|..+...++.
T Consensus       865 ~~~~~~~~al~~agl~~~did~~~~Hq~--~~~i~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~~~~~  942 (979)
T 3tsy_A          865 NVEKCLTQAFDPLGISDWNSLFWIAHPG--GPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLK  942 (979)
T ss_dssp             HHHHHHHHHHGGGTCCCGGGSEEEECCS--CHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhcCCCCcccceEEECCC--ChHHHHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHHhhhcc
Confidence            3567888999999999999999875321  1122345677889853 21111       256777778888888887777


Q ss_pred             C
Q psy13271         85 G   85 (110)
Q Consensus        85 G   85 (110)
                      |
T Consensus       943 G  943 (979)
T 3tsy_A          943 G  943 (979)
T ss_dssp             T
T ss_pred             c
Confidence            7

>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}

Probab=92.59  E-value=0.33  Score=34.96  Aligned_cols=73  Identities=15%  Similarity=0.122  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHcCCCccccCeEEEEeecCCCcchh--HHHHHcCCCCCCeee------E-eccchHHHHHHHHHHHHHHcC
Q psy13271         15 KEALIKALDDAGISINQVQQACCGYVYGDSTCGQ--RALYQIGMTGIPVFN------V-NNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus        15 ~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~--~~a~~lg~~~~~~~~------i-~~~C~sg~~al~~A~~~i~sG   85 (110)
                      ..+++++|+++|++++|||.+-+.    +.+...  ...+.||+...+...      + ....++|...+..+...++..
T Consensus       308 ~~a~~~al~~Agl~~~dId~~e~h----daf~~~~l~~~~~lg~~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~  383 (407)
T 3svk_A          308 TPATRKVLDRAGLTIDDIDLFELN----EAFASVVLKFQKDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERR  383 (407)
T ss_dssp             HHHHHHHHHHHTCCGGGCSEEEEC----CSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHCCEEEEe----ChhHHHHHHHHHHhCCCCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhc
Confidence            578899999999999999998763    222222  234567875322111      1 123466777777777777765


Q ss_pred             -CCeEEE
Q psy13271         86 -SDCTLA   91 (110)
Q Consensus        86 -~~~vlv   91 (110)
                       .++.|+
T Consensus       384 ~~~~gl~  390 (407)
T 3svk_A          384 NARRALI  390 (407)
T ss_dssp             TCCEEEE
T ss_pred             CCCEEEE
Confidence             777664

>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*

Probab=92.57  E-value=0.17  Score=35.71  Aligned_cols=79  Identities=20%  Similarity=0.258  Sum_probs=47.8

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC-CCeeeE-----eccchHHHHHHHHHHHHHHcC
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG-IPVFNV-----NNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~-~~~~~i-----~~~C~sg~~al~~A~~~i~sG   85 (110)
                      ....++++++|+++|++++|||.+++.......  -..+++.||+.. .....+     ++++++-..+|..+   ++.|
T Consensus       238 ~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~--~~~~~~~lgl~~ek~~~~~~~~~GNt~aAsipl~L~~~---~~~g  312 (357)
T 3s3l_A          238 DLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT--GHELHDLLGLPDERTSWAYGRTTGHVGAGDQYAGLAHL---VENA  312 (357)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS--SCCHHHHHTSCGGGBTHHHHHHHCBCTTCHHHHHHHHH---HHTT
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH--HHHHHHHcCCCHHHhHHHhccccccchHhHHHHHHHHH---HHcC
Confidence            345678899999999999999999863322222  345778888853 111122     22344444555544   3444


Q ss_pred             -C---CeEEEEeec
Q psy13271         86 -S---DCTLALGFE   95 (110)
Q Consensus        86 -~---~~vlv~g~e   95 (110)
                       .   |.+|+++.-
T Consensus       313 ~l~~Gd~vll~~fG  326 (357)
T 3s3l_A          313 LVQPGDRVLLFGGG  326 (357)
T ss_dssp             CCCTTCEEEEECCB
T ss_pred             CCCCCCEEEEEEEc
Confidence             2   677777644

>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}

Probab=92.46  E-value=0.3  Score=35.00  Aligned_cols=80  Identities=16%  Similarity=0.185  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHc-CCC---CCCeeeE----eccchHHHHHHHHHHHHHHc
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQI-GMT---GIPVFNV----NNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~l-g~~---~~~~~~i----~~~C~sg~~al~~A~~~i~s   84 (110)
                      ...++++++|+++|++++|||.++.-..  ....-..+++.+ |+.   ......+    ++.+++-..+|..+...++.
T Consensus       292 ~~~~~i~~~L~~~gl~~~dId~~v~Hqa--n~~i~~~~~~~llgl~~~~~k~~~~l~~~GNtssAsipl~L~~~~~~~~~  369 (392)
T 3led_A          292 LVSEMIIEHAREIGIDPHGLKRMWLHQA--NINMNEIIGRKVLGRDPTRDENVIILDDYANTSSAGSIIAFHKHQDDMAQ  369 (392)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCSEEEECSS--CHHHHHHHHHHHHTSCCCTTTBCCCHHHHCBCGGGHHHHHHHHCCTTCCT
T ss_pred             HHHHHHHHHHHHcCCCHHHCcEEEEcCC--CHHHHHHHHHHhcCCCCCHHHHHHHHhhhCccHHHHHHHHHHHHhCCCCC
Confidence            4556788999999999999998875221  112233456664 752   1111222    45555556666554333334


Q ss_pred             CCCeEEEEeec
Q psy13271         85 GSDCTLALGFE   95 (110)
Q Consensus        85 G~~~vlv~g~e   95 (110)
                      | |.+|+++.-
T Consensus       370 G-d~vll~gfG  379 (392)
T 3led_A          370 G-DLGLICSFG  379 (392)
T ss_dssp             T-CEEEEEEEE
T ss_pred             C-CEEEEEEEC
Confidence            4 667766654

>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}

Probab=91.89  E-value=0.8  Score=34.08  Aligned_cols=77  Identities=13%  Similarity=-0.019  Sum_probs=53.1

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchh--HHHHHcCCCC---CCee------eE-eccchHHHHHHHHHHH
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQ--RALYQIGMTG---IPVF------NV-NNNCSTGSSALMLAKQ   80 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~--~~a~~lg~~~---~~~~------~i-~~~C~sg~~al~~A~~   80 (110)
                      -...+++++|+++|++++|||.+=+.    +-+...  ...+.||+..   .+.+      .+ ....++|+..|.....
T Consensus       318 ~~~~a~~~al~~agl~~~did~~E~~----dAF~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~  393 (520)
T 4egv_A          318 ASVTAVNEALRVAGIGLDDVAAFDLY----SCFPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVN  393 (520)
T ss_dssp             HHHHHHHHHHHHHTCCGGGEEEEEEC----CSSSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCHHHCCEEEEe----CCcHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHH
Confidence            34678899999999999999987654    223222  3346677731   1211      11 1346788999999999


Q ss_pred             HHHcC-CCeEEEEe
Q psy13271         81 FIESG-SDCTLALG   93 (110)
Q Consensus        81 ~i~sG-~~~vlv~g   93 (110)
                      .+|.+ .++.|+.+
T Consensus       394 ~lr~~~~~~~L~~~  407 (520)
T 4egv_A          394 EMRDKPGQFALVGA  407 (520)
T ss_dssp             HHHHSTTCEEEEEE
T ss_pred             HHhcCCCCceEEeC
Confidence            99999 88888754

>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}

Probab=91.32  E-value=0.45  Score=31.42  Aligned_cols=54  Identities=17%  Similarity=0.316  Sum_probs=35.9

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH----HHHHcCC-CCCCeeeEe
Q psy13271         11 PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQR----ALYQIGM-TGIPVFNVN   65 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~----~a~~lg~-~~~~~~~i~   65 (110)
                      .+.....++++|+++|++++|||.|.++..-+.+ .+-+    .++.|.+ .++|.+.++
T Consensus        36 s~~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsf-TglRig~~~AkgLa~~~~iPl~gVs   94 (213)
T 3r6m_A           36 TKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSF-TGVRIGIGIAQGLAFGAELPMIGVS   94 (213)
T ss_dssp             HHHHHHHHHHHHHTTTCCTTTCSEEEEEEESSCH-HHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             HHHHHHHHHHHHHHcCCCHHHccEEEEecCCCch-hhHHHHHHHHHHHHHHhCCCEEEEc
Confidence            4555678899999999999999999997664433 3322    2332221 245777775

>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=91.20  E-value=0.26  Score=35.34  Aligned_cols=73  Identities=19%  Similarity=0.130  Sum_probs=44.5

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCCCCeee----E-eccchHHHHHHHHHHHHHHc
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTGIPVFN----V-NNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~~~~~~----i-~~~C~sg~~al~~A~~~i~s   84 (110)
                      -..++++++|+++|++++|||.+....+......+   ..+...+|-...+...    + ....++|...+..+...++.
T Consensus       280 ~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~  359 (415)
T 1tqy_B          280 GLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGREGVPVTVPKTTTGRLYSGGGPLDVVTALMSLRE  359 (415)
T ss_dssp             SHHHHHHHHHHHHTCCGGGCCEEECCCCCSHHHHHHHHHHHHHHHCTTCSEEECGGGGTCBCGGGHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCHhHCCEEEEeCCCCcCcCHHHHHHHHHHhCCCCceEeccchhhccChHHHHHHHHHHHHHHHhc
Confidence            34678899999999999999988753221101111   1233445433222211    1 34567888888888888887


Q ss_pred             C
Q psy13271         85 G   85 (110)
Q Consensus        85 G   85 (110)
                      +
T Consensus       360 ~  360 (415)
T 1tqy_B          360 G  360 (415)
T ss_dssp             T
T ss_pred             C
Confidence            6

>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}

Probab=90.96  E-value=0.47  Score=34.22  Aligned_cols=73  Identities=14%  Similarity=0.121  Sum_probs=44.5

Q ss_pred             HHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH--HHHHcCCCCCCeee------E-eccchHHHHHHHHHHHHHHcC
Q psy13271         15 KEALIKALDDAGISINQVQQACCGYVYGDSTCGQR--ALYQIGMTGIPVFN------V-NNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus        15 ~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~--~a~~lg~~~~~~~~------i-~~~C~sg~~al~~A~~~i~sG   85 (110)
                      ..|++++|+++|++++|||.+=+..    .+..+.  ..+.||+...|...      + ....++|...+..+...++..
T Consensus       316 ~~a~~~al~~Agl~~~dId~vE~h~----af~~~~~~~~~~lg~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~  391 (418)
T 2iik_A          316 AYAIPVALQKAGLTVSDVDIFEINE----AFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRR  391 (418)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEEEECC----SBHHHHHHHHHHHTCCGGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHCCeeeeec----cchHHHHHHHHHcCCCccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhc
Confidence            4689999999999999999875532    222222  23457774322221      1 123456777777777777765


Q ss_pred             -CC-eEEE
Q psy13271         86 -SD-CTLA   91 (110)
Q Consensus        86 -~~-~vlv   91 (110)
                       .+ +.|+
T Consensus       392 ~~~~~gl~  399 (418)
T 2iik_A          392 GKRAYGVV  399 (418)
T ss_dssp             TSCEEEEE
T ss_pred             CCCeeeEE
Confidence             55 5443

>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A

Probab=90.72  E-value=1.8  Score=26.33  Aligned_cols=49  Identities=18%  Similarity=0.234  Sum_probs=35.3

Q ss_pred             HHHHHHHHHcCCCccccCeEEEEeecCC--CcchhHHHHHc-CCCCCCeeeEe
Q psy13271         16 EALIKALDDAGISINQVQQACCGYVYGD--STCGQRALYQI-GMTGIPVFNVN   65 (110)
Q Consensus        16 ~a~~~al~~agl~~~~id~vi~~~~~~~--~~~~~~~a~~l-g~~~~~~~~i~   65 (110)
                      +-..+.+++.+++++||-.+++. .++|  ..+|+.+++.+ |+..+|.+...
T Consensus        26 eLl~~i~~~N~l~~~dIvSv~FT-~T~DL~a~FPA~aaR~~~gw~~VpL~c~q   77 (127)
T 1dbf_A           26 QLLEKIIEENHTKPEDVVQMLLS-ATPDLHAVFPAKAVRELSGWQYVPVTCMQ   77 (127)
T ss_dssp             HHHHHHHHHHCCCGGGEEEEEEE-ECTTCCSSCTHHHHHTSTTCTTSCEEEEE
T ss_pred             HHHHHHHHHcCCCHHHEEEEEEE-eCCccCccChHHHHhccCCCCccchhhcc
Confidence            33455667889999999988874 4455  34678888888 88888866543

>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A

Probab=90.70  E-value=0.19  Score=36.32  Aligned_cols=74  Identities=18%  Similarity=0.090  Sum_probs=47.1

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEE-eecCCCc--chhHHHHHcCCC--CCCeee----E-eccchHHHHHHHHHHHH
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCG-YVYGDST--CGQRALYQIGMT--GIPVFN----V-NNNCSTGSSALMLAKQF   81 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~-~~~~~~~--~~~~~a~~lg~~--~~~~~~----i-~~~C~sg~~al~~A~~~   81 (110)
                      .-..++++++|+++|++++|||.+... +.++...  ....+.+.+|..  .++...    + +...++|...+..+...
T Consensus       292 ~~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~~d~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~  371 (427)
T 3ho9_A          292 AGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILA  371 (427)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCHHHccEEEecCCcCCCcCHHHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHH
Confidence            345678999999999999999988753 2221111  112334555542  222111    1 35678888899888999


Q ss_pred             HHcC
Q psy13271         82 IESG   85 (110)
Q Consensus        82 i~sG   85 (110)
                      ++.+
T Consensus       372 l~~~  375 (427)
T 3ho9_A          372 LRDQ  375 (427)
T ss_dssp             HHHT
T ss_pred             HhcC
Confidence            8887

>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2

Probab=90.58  E-value=0.27  Score=34.89  Aligned_cols=73  Identities=14%  Similarity=0.018  Sum_probs=43.7

Q ss_pred             HHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCCCe------e-eE-eccchHHHHHHHHHHHHHHcC---
Q psy13271         17 ALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPV------F-NV-NNNCSTGSSALMLAKQFIESG---   85 (110)
Q Consensus        17 a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~~------~-~i-~~~C~sg~~al~~A~~~i~sG---   85 (110)
                      +++++|+++|++++|||.++.-...  ......+.+.+|+..-..      . .+ ++.+++...+|..+.   +.|   
T Consensus       257 ~i~~aL~~agl~~~dId~v~~H~~~--~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~---~~g~~~  331 (382)
T 1u0m_A          257 ALKELAGEHGWDASDLDFYIVHAGG--PRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLF---DEGGVE  331 (382)
T ss_dssp             HHHHHHHTTSCCSSCCSCCEEECSH--HHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHH---HSCCCC
T ss_pred             HHHHHHHHcCCCHHHCCEEEECCCC--HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHH---HhcCCC
Confidence            8899999999999999998864321  112235667888853111      1 11 345555555554443   444   


Q ss_pred             -CCeEEEEee
Q psy13271         86 -SDCTLALGF   94 (110)
Q Consensus        86 -~~~vlv~g~   94 (110)
                       -+.+|+++.
T Consensus       332 ~Gd~vll~~~  341 (382)
T 1u0m_A          332 EGARGLLAGF  341 (382)
T ss_dssp             SSCCCEEEEE
T ss_pred             CCCEEEEEEE
Confidence             256666553

>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A

Probab=90.46  E-value=0.52  Score=31.34  Aligned_cols=54  Identities=22%  Similarity=0.329  Sum_probs=36.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH----HHHHc--CCCCCCeeeEe
Q psy13271         10 YPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQR----ALYQI--GMTGIPVFNVN   65 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~----~a~~l--g~~~~~~~~i~   65 (110)
                      -.+.....++++|+++|++++|||.|.++..-+ .+.+-+    .++.|  ++ ++|.+.++
T Consensus        34 h~~~l~~~i~~~L~~a~~~~~did~Iav~~GPG-sftglRig~~~ak~la~~~-~~Pl~~V~   93 (231)
T 2gel_A           34 HTQRILPMVQEILAASGASLNEIDALAFGRGPG-SFTGVRIGIGIAQGLALGA-NLPMIGVS   93 (231)
T ss_dssp             CHHHHHHHHHHHHHHTTCCGGGCSEEEEECCSS-CHHHHHHHHHHHHHHHHTT-TCCEEEEC
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCC-hhHhHHHHHHHHHHHHHHc-CCCEEEec
Confidence            345577788999999999999999999976533 323322    23322  33 45777665

>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A

Probab=90.42  E-value=0.69  Score=33.39  Aligned_cols=72  Identities=14%  Similarity=0.144  Sum_probs=45.2

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCC--CCeee----E-eccchHHHHHHHHHHHHH
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTG--IPVFN----V-NNNCSTGSSALMLAKQFI   82 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~--~~~~~----i-~~~C~sg~~al~~A~~~i   82 (110)
                      -..++++++|+++|++++|||.+..-.+. .....   ..+.+.+|...  .+...    + ...+++|...+..+...+
T Consensus       294 ~~~~ai~~al~~Agl~~~dId~ve~Hgtg-T~~d~~e~~al~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l  372 (428)
T 3kzu_A          294 GAQRCMVAALKRAGIVPDEIDYINAHGTS-TMADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAI  372 (428)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCCEEECCCCS-STTHHHHHHHHHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCHHHeeEEEecCCc-chhhHHHHHHHHHHhccCCCceeeCCchhhhCCCchhhHHHHHHHHHHHh
Confidence            45678899999999999999988643221 12111   12334455432  11111    1 234678888888888888


Q ss_pred             HcC
Q psy13271         83 ESG   85 (110)
Q Consensus        83 ~sG   85 (110)
                      +.+
T Consensus       373 ~~~  375 (428)
T 3kzu_A          373 RDN  375 (428)
T ss_dssp             HHT
T ss_pred             ccC
Confidence            887

>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*

Probab=90.35  E-value=1.5  Score=26.51  Aligned_cols=48  Identities=29%  Similarity=0.430  Sum_probs=34.7

Q ss_pred             HHHHHHHHcCCCc-cccCeEEEEeecCC--CcchhHHHHHcCCCCCCeeeEe
Q psy13271         17 ALIKALDDAGISI-NQVQQACCGYVYGD--STCGQRALYQIGMTGIPVFNVN   65 (110)
Q Consensus        17 a~~~al~~agl~~-~~id~vi~~~~~~~--~~~~~~~a~~lg~~~~~~~~i~   65 (110)
                      -..+.+++.++++ +||-.+++. .++|  ..+|+.+++.+|+..+|.+...
T Consensus        26 Ll~~i~~~N~l~~~~divSv~FT-~T~DL~a~FPA~aaR~~g~~~VpL~c~q   76 (122)
T 1ufy_A           26 LLLKMLEANGIQSYEELAAVIFT-VTEDLTSAFPAEAARQIGMHRVPLLSAR   76 (122)
T ss_dssp             HHHHHHHHHTCCCGGGEEEEEEE-ECTTCCSCCHHHHHHHTTGGGSCEEEEE
T ss_pred             HHHHHHHhcCCCChHhEEEEEEE-eCCccCccChHHHHHHcCCCccchhhcc
Confidence            3455667789999 999888874 4455  3467888888898877766543

>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*

Probab=90.26  E-value=0.72  Score=32.83  Aligned_cols=74  Identities=14%  Similarity=0.132  Sum_probs=47.8

Q ss_pred             HHHHHHHHHHcCCCccccCeEEEEeecCCCcchh--HHHHHcCCC---CCC------eeeE-eccchHHHHHHHHHHHHH
Q psy13271         15 KEALIKALDDAGISINQVQQACCGYVYGDSTCGQ--RALYQIGMT---GIP------VFNV-NNNCSTGSSALMLAKQFI   82 (110)
Q Consensus        15 ~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~--~~a~~lg~~---~~~------~~~i-~~~C~sg~~al~~A~~~i   82 (110)
                      ..+++++|+++|++++|||.+-+.    +.+...  .+.+.||+.   ..+      ...+ ....++|...+..+...+
T Consensus       288 ~~a~~~al~~Agl~~~dId~ve~~----d~f~~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L  363 (390)
T 1wdk_C          288 VPATQKALKRAGLNMADIDFIELN----EAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVM  363 (390)
T ss_dssp             HHHHHHHHHHHTCCGGGCCEEEEC----CSBHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcEEEec----cCCHHHHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHH
Confidence            578999999999999999998653    222222  223556653   101      0111 234567777788888888


Q ss_pred             HcC-CCeEEEE
Q psy13271         83 ESG-SDCTLAL   92 (110)
Q Consensus        83 ~sG-~~~vlv~   92 (110)
                      +.+ .++.|+.
T Consensus       364 ~~~~~~~gl~~  374 (390)
T 1wdk_C          364 KQNGGTFGLST  374 (390)
T ss_dssp             HHTTCSEEEEE
T ss_pred             hhcCCCEEEEE
Confidence            887 8877754

>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=89.89  E-value=0.17  Score=36.16  Aligned_cols=74  Identities=20%  Similarity=0.084  Sum_probs=46.4

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc---hhHHHHHcCCC--CCCeee----E-eccchHHHHHHHHHHHH
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYVYGDSTC---GQRALYQIGMT--GIPVFN----V-NNNCSTGSSALMLAKQF   81 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~---~~~~a~~lg~~--~~~~~~----i-~~~C~sg~~al~~A~~~   81 (110)
                      +-..++++++|+++|++++|||.+..-........   ...+.+.+|..  ..+...    + +..+++|...+..+...
T Consensus       275 ~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~  354 (408)
T 1j3n_A          275 KGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQA  354 (408)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHH
Confidence            34567899999999999999998875322111101   12234445532  222211    1 35677888888888888


Q ss_pred             HHcC
Q psy13271         82 IESG   85 (110)
Q Consensus        82 i~sG   85 (110)
                      ++.|
T Consensus       355 l~~~  358 (408)
T 1j3n_A          355 LYHG  358 (408)
T ss_dssp             HHHT
T ss_pred             HhcC
Confidence            8887

>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9

Probab=89.71  E-value=0.46  Score=31.45  Aligned_cols=54  Identities=22%  Similarity=0.313  Sum_probs=35.3

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH----HHHHcCC-CCCCeeeEe
Q psy13271         11 PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQR----ALYQIGM-TGIPVFNVN   65 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~----~a~~lg~-~~~~~~~i~   65 (110)
                      .+.....+.++|+++|++++|||.|.++..-+ .+.+-+    .++.|.+ .++|.+.++
T Consensus        46 se~L~p~i~~~L~~a~~~~~dld~Iav~~GPG-sfTGlRiG~~~Ak~La~~~~iPl~gVs  104 (218)
T 2a6a_A           46 AEILPVVVKKLLDELDLKVKDLDVVGVGIGPG-GLTGLRVGIATVVGLVSPYDIPVAPLN  104 (218)
T ss_dssp             GGHHHHHHHHHHHHHTCCGGGCSEEEEECCSS-CHHHHHHHHHHHHHHHGGGTCCEEEEC
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCC-chHhHHHHHHHHHHHHHHcCCCEEEeC
Confidence            34566778899999999999999999976533 333322    2333322 245777665

>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}

Probab=89.34  E-value=0.41  Score=34.33  Aligned_cols=74  Identities=15%  Similarity=0.179  Sum_probs=46.3

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEee-cC--CCcchhHHHHHcCCCCCCeeeE-----eccchHHHHHHHHHHHHH
Q psy13271         11 PELAKEALIKALDDAGISINQVQQACCGYV-YG--DSTCGQRALYQIGMTGIPVFNV-----NNNCSTGSSALMLAKQFI   82 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id~vi~~~~-~~--~~~~~~~~a~~lg~~~~~~~~i-----~~~C~sg~~al~~A~~~i   82 (110)
                      .+-..++++++|+++|++++|||.|..-.+ ++  +......+...++-+ .+...+     ....++|...+..+...+
T Consensus       278 ~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~~~~-~~v~s~K~~~GH~~gAsG~~~~~~~~~~l  356 (412)
T 4ewg_A          278 ASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRGDVAESQATARTFGER-MPISSLKSYVGHTLGACGALEAWWTIEMM  356 (412)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHHHHHHHHHHHHHHCTT-CEEECTHHHHCBCGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCccccHHHHHHHHHHcCCC-CeeeCccccccccHHHHHHHHHHHHHHHH
Confidence            455678899999999999999999875321 11  111112233445432 222211     345678888888888888


Q ss_pred             HcC
Q psy13271         83 ESG   85 (110)
Q Consensus        83 ~sG   85 (110)
                      +.+
T Consensus       357 ~~~  359 (412)
T 4ewg_A          357 KRN  359 (412)
T ss_dssp             HHT
T ss_pred             hcC
Confidence            887

>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}

Probab=89.32  E-value=0.35  Score=34.69  Aligned_cols=74  Identities=20%  Similarity=0.172  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEE-eecC--CCcchhHHHHHcCCC--CCCeeeE-----eccchHHHHHHHHHHHH
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCG-YVYG--DSTCGQRALYQIGMT--GIPVFNV-----NNNCSTGSSALMLAKQF   81 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~-~~~~--~~~~~~~~a~~lg~~--~~~~~~i-----~~~C~sg~~al~~A~~~   81 (110)
                      .-..++++++|+++|++++|||.+..- +.++  +......+...++..  ..+....     ....++|...+..+...
T Consensus       277 ~~~~~a~~~al~~agl~~~dId~ve~HgtgT~~~d~~e~~al~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~  356 (413)
T 3o04_A          277 EGAARAMKMAIDDAGLTPDKVDYINAHGTSTPYNDEYETQAIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLT  356 (413)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHHGGGTTTSEEECTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHhcccCCCCceecccccccccHHHHHHHHHHHHHHH
Confidence            345788999999999999999988753 2211  111112233444432  1222111     24567888888888888


Q ss_pred             HHcC
Q psy13271         82 IESG   85 (110)
Q Consensus        82 i~sG   85 (110)
                      ++.+
T Consensus       357 l~~~  360 (413)
T 3o04_A          357 IRDN  360 (413)
T ss_dssp             HHHT
T ss_pred             HHhC
Confidence            8877

>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}

Probab=89.30  E-value=0.48  Score=33.75  Aligned_cols=73  Identities=16%  Similarity=0.152  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH--HHHHcCC---CCCCee------eE-eccchHHHHHHHHHHHHH
Q psy13271         15 KEALIKALDDAGISINQVQQACCGYVYGDSTCGQR--ALYQIGM---TGIPVF------NV-NNNCSTGSSALMLAKQFI   82 (110)
Q Consensus        15 ~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~--~a~~lg~---~~~~~~------~i-~~~C~sg~~al~~A~~~i   82 (110)
                      ..+++++|+++|++++|||.+-+..    .+....  ..+.||+   ...+..      .+ ....++|...+..+...+
T Consensus       285 ~~a~~~al~~agl~~~did~ve~h~----~f~~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L  360 (387)
T 3goa_A          285 VPASKLALKKAGLSASDIDVFEMNE----AFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLM  360 (387)
T ss_dssp             HHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHcCEEEEeC----cchHHHHHHHHHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHH
Confidence            6788999999999999999987542    222222  2345676   111111      11 233457777777777777


Q ss_pred             HcC-CCeEEE
Q psy13271         83 ESG-SDCTLA   91 (110)
Q Consensus        83 ~sG-~~~vlv   91 (110)
                      +.. .++.|+
T Consensus       361 ~~~~~~~gl~  370 (387)
T 3goa_A          361 ERKDAQFGLA  370 (387)
T ss_dssp             HHTTCSEEEE
T ss_pred             HhcCCCEEEE
Confidence            766 777665

>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*

Probab=88.89  E-value=0.49  Score=34.41  Aligned_cols=73  Identities=14%  Similarity=0.035  Sum_probs=45.4

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCC-CCCeee-----EeccchHHHHHHHHHHHHHH
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMT-GIPVFN-----VNNNCSTGSSALMLAKQFIE   83 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~-~~~~~~-----i~~~C~sg~~al~~A~~~i~   83 (110)
                      -..++++++|+++|++++|||.+..-.+......+   ..+...++.. +.+...     =....++|...+..+...++
T Consensus       309 ~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~d~~E~~al~~~~~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~  388 (451)
T 4ddo_A          309 GAMRAMKLALRMGDVAPEQVDYVNAHATSTPVGDAGEIEALKTVFGVGAGPAISSTKSATGHLLGAAGAIEAAFSILALR  388 (451)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHCSSSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCHHHcCEEEecCCcCcccCHHHHHHHHHHhCCCCCCcccCchhhhccCHHHHHHHHHHHHHHHHh
Confidence            45678999999999999999998753211101111   1233445542 222111     13456788888888888888


Q ss_pred             cC
Q psy13271         84 SG   85 (110)
Q Consensus        84 sG   85 (110)
                      .+
T Consensus       389 ~~  390 (451)
T 4ddo_A          389 DG  390 (451)
T ss_dssp             HT
T ss_pred             cC
Confidence            87

>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=88.89  E-value=0.33  Score=34.89  Aligned_cols=74  Identities=16%  Similarity=0.120  Sum_probs=46.1

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecC---CCcchhHHHHHcCCC--CCCeeeE-----eccchHHHHHHHHHHHH
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYVYG---DSTCGQRALYQIGMT--GIPVFNV-----NNNCSTGSSALMLAKQF   81 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~~~---~~~~~~~~a~~lg~~--~~~~~~i-----~~~C~sg~~al~~A~~~   81 (110)
                      +-..++++++|+++|++++|||.+..-.+..   |......+...++..  ..+...+     +...++|...+..+...
T Consensus       283 ~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~  362 (424)
T 1tqy_A          283 REMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLA  362 (424)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEecCccCcCcCHHHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHH
Confidence            3457789999999999999999887532211   111112233445432  1232211     34567888888888888


Q ss_pred             HHcC
Q psy13271         82 IESG   85 (110)
Q Consensus        82 i~sG   85 (110)
                      ++.|
T Consensus       363 l~~~  366 (424)
T 1tqy_A          363 LEHG  366 (424)
T ss_dssp             HHHC
T ss_pred             HHcC
Confidence            8887

>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A

Probab=87.96  E-value=0.49  Score=34.11  Aligned_cols=73  Identities=18%  Similarity=0.127  Sum_probs=46.1

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCCCCeee-----EeccchHHHHHHHHHHHHHH
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTGIPVFN-----VNNNCSTGSSALMLAKQFIE   83 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~~~~~~-----i~~~C~sg~~al~~A~~~i~   83 (110)
                      +-..++++++|+++|++++|||.+..-........+   ..+...+|-+ .+..+     =...+++|...+..+...++
T Consensus       296 ~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~-~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~  374 (430)
T 1ox0_A          296 QGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGKE-VPVSSTKSFTGHLLGAAGAVEAIVTIEAMR  374 (430)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCSS-SEEECTHHHHCBCGGGHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcCHHHcCEEEEeCCcCcccCHHHHHHHHHHhCCC-ceecccccccccchhhHHHHHHHHHHHHHh
Confidence            345678999999999999999988753321111111   1233445432 22211     13566788888888888888


Q ss_pred             cC
Q psy13271         84 SG   85 (110)
Q Consensus        84 sG   85 (110)
                      .+
T Consensus       375 ~~  376 (430)
T 1ox0_A          375 HN  376 (430)
T ss_dssp             HT
T ss_pred             cC
Confidence            87

>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*

Probab=87.18  E-value=1.4  Score=31.61  Aligned_cols=73  Identities=16%  Similarity=0.168  Sum_probs=44.0

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchh--HHHHHcCCCCCCeeeE-----eccchHHHHHHHHHHHHHHcC
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQ--RALYQIGMTGIPVFNV-----NNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~--~~a~~lg~~~~~~~~i-----~~~C~sg~~al~~A~~~i~sG   85 (110)
                      -..++++++|+++|++++|||.+..-.+......+.  .....++....+....     ....++|...+..+...++.|
T Consensus       286 ~~~~ai~~al~~agl~~~dId~ve~HgtgT~~gD~~E~~al~~~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~  365 (416)
T 2wge_A          286 RAGRAMTRSLELAGLSPADIDHVNAHGTATPIGDAAEANAIRVAGCDQAAVYAPKSALGHSIGAVGALESVLTVLTLRDG  365 (416)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHTTCTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEECCCCCcCCCHHHHHHHHHhccCCCCccCCcccccCcHHHHHHHHHHHHHHHHhcC
Confidence            456789999999999999999887532211011111  1123334322222211     345678888888888888887

>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}

Probab=86.27  E-value=0.66  Score=33.61  Aligned_cols=73  Identities=15%  Similarity=0.187  Sum_probs=45.4

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc-ch---hHHHHHcCCCCCCeee----E-eccchHHHHHHHHHHHHH
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYVYGDST-CG---QRALYQIGMTGIPVFN----V-NNNCSTGSSALMLAKQFI   82 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~-~~---~~~a~~lg~~~~~~~~----i-~~~C~sg~~al~~A~~~i   82 (110)
                      +-..++++++|+++|++++|||.+..- .++... .+   ..+...+|-.+.+...    + ...+++|...+..+...+
T Consensus       302 ~~~~~ai~~al~~Agl~~~dId~ve~H-gtgt~~~D~~E~~al~~~fg~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l  380 (434)
T 2gp6_A          302 ERAGHAITRAIQLAGLAPGDIDHVNAH-ATGTQVGDLAEGRAINNALGGNRPAVYAPKSALGHSVGAVGAVESILTVLAL  380 (434)
T ss_dssp             HHHHHHHHHHHHHTTCCTTTEEEEECC-CCSCHHHHHHHHHHHHHHHTTCCCEECCTHHHHCBCTTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCHHHcCEEEEe-CCcCccchHHHHHHHHHHhccCCCCcccchhhhcCchhhhHHHHHHHHHHHH
Confidence            345678999999999999999988764 222111 11   1223334432211111    1 245678888888888889


Q ss_pred             HcC
Q psy13271         83 ESG   85 (110)
Q Consensus        83 ~sG   85 (110)
                      +.+
T Consensus       381 ~~~  383 (434)
T 2gp6_A          381 RDQ  383 (434)
T ss_dssp             HHS
T ss_pred             hcC
Confidence            888

>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}

Probab=84.80  E-value=2.5  Score=29.61  Aligned_cols=78  Identities=13%  Similarity=0.020  Sum_probs=45.9

Q ss_pred             HHHHHHHHHHHHHcC------CCccccCeEEEEeecCCCcchhHHHHHcCCCCCCee---e----E-eccchHHHHHHHH
Q psy13271         12 ELAKEALIKALDDAG------ISINQVQQACCGYVYGDSTCGQRALYQIGMTGIPVF---N----V-NNNCSTGSSALML   77 (110)
Q Consensus        12 ~l~~~a~~~al~~ag------l~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~~~---~----i-~~~C~sg~~al~~   77 (110)
                      +...++++++|+++|      ++++|||.+ .-..  .......+.+.||+..-...   .    + ++++++-..+|..
T Consensus       267 ~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~~--~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~~L~~  343 (374)
T 2h84_A          267 SGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHTG--GKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDH  343 (374)
T ss_dssp             HHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECCC--CHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCccccCCChhhcCEe-ECCC--CHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHH
Confidence            345667889999999      999999998 5321  11223456778888531111   1    1 3444444444443


Q ss_pred             HHHHHHcC--CCeEEEEeec
Q psy13271         78 AKQFIESG--SDCTLALGFE   95 (110)
Q Consensus        78 A~~~i~sG--~~~vlv~g~e   95 (110)
                         +++.|  -+.+++++.-
T Consensus       344 ---~~~~~~~Gd~vll~~~G  360 (374)
T 2h84_A          344 ---ARKSKSLPTYSISLAFG  360 (374)
T ss_dssp             ---HHTCSCCCSEEEEEEEE
T ss_pred             ---HHhhcCCCCeEEEEEec
Confidence               34455  4677776643

>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}

Probab=84.27  E-value=2.3  Score=33.90  Aligned_cols=75  Identities=15%  Similarity=0.242  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEee-cC--CCcchhHHHHHcCCC---CCCeee------E-eccchHHHHHHHH
Q psy13271         11 PELAKEALIKALDDAGISINQVQQACCGYV-YG--DSTCGQRALYQIGMT---GIPVFN------V-NNNCSTGSSALML   77 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id~vi~~~~-~~--~~~~~~~~a~~lg~~---~~~~~~------i-~~~C~sg~~al~~   77 (110)
                      .+-..++++++|+++|++++|||.|..-.+ ++  +......+...++..   ..++..      + ....++|...+..
T Consensus       285 ~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik  364 (915)
T 2qo3_A          285 GPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLK  364 (915)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCTTTHHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCccCCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHH
Confidence            345677899999999999999998875322 22  111122345566642   122221      1 2456788888888


Q ss_pred             HHHHHHcC
Q psy13271         78 AKQFIESG   85 (110)
Q Consensus        78 A~~~i~sG   85 (110)
                      +...++.|
T Consensus       365 ~~l~L~~~  372 (915)
T 2qo3_A          365 VVLALRNG  372 (915)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHhcC
Confidence            88888887

>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*

Probab=83.92  E-value=5.6  Score=28.33  Aligned_cols=81  Identities=12%  Similarity=0.006  Sum_probs=49.1

Q ss_pred             HHHHHHHHHHHHcCCCccccCe----EEEEeecCCCcchhHHHHHcCCCC-CCee--e----E-eccchHHHHHHHHHHH
Q psy13271         13 LAKEALIKALDDAGISINQVQQ----ACCGYVYGDSTCGQRALYQIGMTG-IPVF--N----V-NNNCSTGSSALMLAKQ   80 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~----vi~~~~~~~~~~~~~~a~~lg~~~-~~~~--~----i-~~~C~sg~~al~~A~~   80 (110)
                      ...++++++|+++|++++ ||.    ++.-..  ....-..+.+.||+.. ....  .    . ++.+++-..+|..+.+
T Consensus       291 ~~~~~i~~~L~~agl~~~-id~~di~~v~Hq~--~~~i~~~~~~~lgl~~~k~~~s~~~l~~~GNt~sAsi~~~L~~~~~  367 (406)
T 2d3m_A          291 NVEACLIDVFKSVGITPP-EDWNSLFWIPHPG--GRAILDQVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDEMRR  367 (406)
T ss_dssp             HHHHHHHHHHHTTTCCCC-SSGGGSEEEECCS--CHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCC-CCccceEEEECCC--CHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHHHHHHH
Confidence            455778899999999988 876    554221  1112345677889853 2221  1    1 5677777777766654


Q ss_pred             HH-HcC-------CCeEEEEeecc
Q psy13271         81 FI-ESG-------SDCTLALGFEK   96 (110)
Q Consensus        81 ~i-~sG-------~~~vlv~g~e~   96 (110)
                      .= +.|       .+.+|+++.-.
T Consensus       368 ~g~~~G~~~~g~~~d~vll~~fG~  391 (406)
T 2d3m_A          368 KSAAKGLETYGEGLEWGVLLGFGP  391 (406)
T ss_dssp             HHHHTTCSBTTTTCSEEEEEEEET
T ss_pred             hccccCCCccCCCcceEEEEEecc
Confidence            33 333       17888877543

>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A

Probab=82.96  E-value=0.82  Score=32.65  Aligned_cols=68  Identities=13%  Similarity=0.152  Sum_probs=43.1

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHH--HHHcCCCCCCee------eE-eccchHHHHHHHHHHHHHHc
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRA--LYQIGMTGIPVF------NV-NNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~--a~~lg~~~~~~~------~i-~~~C~sg~~al~~A~~~i~s   84 (110)
                      ...+++++|+++|++++|||.+=+..    .+....+  .+.||+...+..      .+ ....++|...+..+...++.
T Consensus       295 ~~~a~~~al~~Agl~~~dId~ve~h~----~ft~~~l~~~~~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~  370 (393)
T 1afw_A          295 PAYAIPKVLEATGLQVQDIDIFEINE----AFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKK  370 (393)
T ss_dssp             HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEEec----cCHHHHHHHHHHhCCCCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhh
Confidence            36789999999999999999886532    2222222  245777432211      12 23455777777777777776


Q ss_pred             C
Q psy13271         85 G   85 (110)
Q Consensus        85 G   85 (110)
                      +
T Consensus       371 ~  371 (393)
T 1afw_A          371 D  371 (393)
T ss_dssp             T
T ss_pred             c
Confidence            5

>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}

Probab=82.08  E-value=1.7  Score=30.37  Aligned_cols=29  Identities=24%  Similarity=0.320  Sum_probs=24.9

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEee
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYV   40 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~   40 (110)
                      +....+++++|+++|++++|||.|.++..
T Consensus        54 ~~l~~~i~~~L~~ag~~~~did~Iav~~g   82 (334)
T 3eno_A           54 EVIDTVISRALEKAKISIHDIDLIGFSMG   82 (334)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCCEEEEECS
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence            45678899999999999999999998643

>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*

Probab=81.84  E-value=2.3  Score=29.62  Aligned_cols=29  Identities=31%  Similarity=0.422  Sum_probs=24.3

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEee
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYV   40 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~   40 (110)
                      +....+++++|+++|++++|||.|.++..
T Consensus        49 ~~l~~~i~~~L~~agi~~~did~Ia~~~G   77 (330)
T 2ivn_A           49 RLMKPLLRKALSEAGVSLDDIDVIAFSQG   77 (330)
T ss_dssp             HHHHHHHHHHHHHHTCCTTTCCEEEEEEE
T ss_pred             HHHHHHHHHHHHHcCCCHHHCcEEEEECC
Confidence            35567889999999999999999987644

>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*

Probab=81.01  E-value=1.3  Score=33.65  Aligned_cols=77  Identities=17%  Similarity=0.147  Sum_probs=44.3

Q ss_pred             HHHHHHHHHHcCCCccccCeEEEEeecCCC------cchh-HH--------HHHcC-CCCCCeeeEeccchHHHHHHHHH
Q psy13271         15 KEALIKALDDAGISINQVQQACCGYVYGDS------TCGQ-RA--------LYQIG-MTGIPVFNVNNNCSTGSSALMLA   78 (110)
Q Consensus        15 ~~a~~~al~~agl~~~~id~vi~~~~~~~~------~~~~-~~--------a~~lg-~~~~~~~~i~~~C~sg~~al~~A   78 (110)
                      ..|++.||+.+|++++|||.|.+....+..      .+.. ..        ++.+. +.+.+...+      -.+.-|.|
T Consensus        53 ~~AI~~cL~~AGi~~~DID~Va~~~~~P~l~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~~~l~~v------~HHlaHAa  126 (576)
T 3ven_A           53 VQAAAFCLAQAGLTVDDLDAVAFGWDLPAMYRERLGGWPHSDSEALDILLPRDVFPRRTDPPLHFV------QHHLAHAA  126 (576)
T ss_dssp             HHHHHHHHHHHTCCGGGCSEEEESSCHHHHHHHHSSCCCCCHHHHHHHHSCTTTSCCSSCCCEEEC------CHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHCcEEEEECCCccchhhhhhcchhhhhhhhhhhhhHHhcccccCCCeEec------CHHHHHHH
Confidence            457789999999999999999874320000      0000 11        11121 122333333      24555666


Q ss_pred             HHHHHcCCCeEEEEeeccC
Q psy13271         79 KQFIESGSDCTLALGFEKM   97 (110)
Q Consensus        79 ~~~i~sG~~~vlv~g~e~~   97 (110)
                      .++..|+.+-++|...|-.
T Consensus       127 SAf~~Spfe~aaVLvvDG~  145 (576)
T 3ven_A          127 SAYYFSGEDRGAVLIVDGQ  145 (576)
T ss_dssp             HHHTTSSCSEEEEEEECSC
T ss_pred             HhhhcCCCCceEEEEEeCC
Confidence            7778888557777777654

>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A

Probab=80.43  E-value=1.3  Score=32.33  Aligned_cols=74  Identities=11%  Similarity=0.122  Sum_probs=44.5

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHH--HHHcCCCCCCee------eE-eccchHHHHHHHHHHHHHHc
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRA--LYQIGMTGIPVF------NV-NNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~--a~~lg~~~~~~~------~i-~~~C~sg~~al~~A~~~i~s   84 (110)
                      ...+++++|+++|++++|||.+=+..    .+....+  .+.||+...+..      .+ ....++|...+..+...++.
T Consensus       317 ~~~A~~~Al~~AGl~~~DId~iE~h~----aft~~~l~~~~~lG~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~  392 (442)
T 2wu9_A          317 PAVAIPAAVKAAGLELDDIDLFEINE----AFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKR  392 (442)
T ss_dssp             HHHHHHHHHHHTTCCGGGCCEEEECC----SBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEEeC----CChHHHHHHHHHhCCCCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhc
Confidence            35789999999999999999886532    2222222  245777432211      11 23345666667666666664


Q ss_pred             C---CCeEEE
Q psy13271         85 G---SDCTLA   91 (110)
Q Consensus        85 G---~~~vlv   91 (110)
                      +   .++.|+
T Consensus       393 ~~~~~~~gla  402 (442)
T 2wu9_A          393 RGKDCRFGVV  402 (442)
T ss_dssp             HCTTCCEEEE
T ss_pred             cCCCCCEEEE
Confidence            2   466664

>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1

Probab=80.11  E-value=1.4  Score=31.56  Aligned_cols=74  Identities=19%  Similarity=0.096  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEee-cC--CCcchhHHHHHcCCC--CCCeee----E-eccchHHHHHHHHHHHH
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYV-YG--DSTCGQRALYQIGMT--GIPVFN----V-NNNCSTGSSALMLAKQF   81 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~-~~--~~~~~~~~a~~lg~~--~~~~~~----i-~~~C~sg~~al~~A~~~   81 (110)
                      +-..++++++|+++|++++|||.+..-.+ ++  +......+...+|..  ..+...    + ....++|...+..+...
T Consensus       281 ~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~  360 (416)
T 1e5m_A          281 RGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMA  360 (416)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCHhHCCEEEEECCCCcCcCHHHHHHHHHHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHH
Confidence            34577899999999999999998875322 11  111112234445432  122211    1 24567888888888888


Q ss_pred             HHcC
Q psy13271         82 IESG   85 (110)
Q Consensus        82 i~sG   85 (110)
                      ++.|
T Consensus       361 l~~~  364 (416)
T 1e5m_A          361 IAED  364 (416)
T ss_dssp             HHHT
T ss_pred             HhcC
Confidence            8887

>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A

Probab=80.07  E-value=7.8  Score=31.09  Aligned_cols=74  Identities=12%  Similarity=0.091  Sum_probs=47.3

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEE-eecCCC--cchhHHHHHcCCC-CCCee--eE-----eccchHHHHHHHHHHH
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCG-YVYGDS--TCGQRALYQIGMT-GIPVF--NV-----NNNCSTGSSALMLAKQ   80 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~-~~~~~~--~~~~~~a~~lg~~-~~~~~--~i-----~~~C~sg~~al~~A~~   80 (110)
                      +-..++++++|+++|++++|||.|-.- +.++-.  .....+...++-. ..+..  .+     ...+++|...+..+..
T Consensus       269 ~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~gD~~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l  348 (965)
T 3hhd_A          269 DIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLL  348 (965)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCHHHhccccccCCCCCCCCHHHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHHHHH
Confidence            445678999999999999999988653 322211  1112344455431 11211  11     3467889999999999


Q ss_pred             HHHcC
Q psy13271         81 FIESG   85 (110)
Q Consensus        81 ~i~sG   85 (110)
                      .++.|
T Consensus       349 ~l~~~  353 (965)
T 3hhd_A          349 SLEHG  353 (965)
T ss_dssp             HHHHT
T ss_pred             HHhcC
Confidence            99888

>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}

Probab=80.02  E-value=1.4  Score=31.85  Aligned_cols=74  Identities=20%  Similarity=0.124  Sum_probs=45.6

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc---hhHHHHHcCCC--CCCeee----E-eccchHHHHHHHHHHHH
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYVYGDSTC---GQRALYQIGMT--GIPVFN----V-NNNCSTGSSALMLAKQF   81 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~---~~~~a~~lg~~--~~~~~~----i-~~~C~sg~~al~~A~~~   81 (110)
                      +-..++++++|+++|++++|||.+..-........   ...+...+|..  ..+...    + ...+++|...+..+...
T Consensus       301 ~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~~D~~E~~al~~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~  380 (437)
T 2gqd_A          301 EGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALS  380 (437)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCHhhCCEEEEECCCCcCcCHHHHHHHHHHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHH
Confidence            34577899999999999999998875322110001   11233445532  122221    1 24567888888888888


Q ss_pred             HHcC
Q psy13271         82 IESG   85 (110)
Q Consensus        82 i~sG   85 (110)
                      ++.|
T Consensus       381 l~~~  384 (437)
T 2gqd_A          381 IKDS  384 (437)
T ss_dssp             HHHT
T ss_pred             HhcC
Confidence            8877

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	110
d1bi5a1	235	c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Med	8e-08
d1u0ma1	200	c.95.1.2 (A:2-201) Putative polyketide synthase SC	8e-06
d1ulqa1	273	c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {T	2e-04
d1teda_	372	c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacte	0.001

>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 235

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Chalcone synthase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

 Score = 46.3 bits (109), Expect = 8e-08
 Identities = 19/97 (19%), Positives = 31/97 (31%), Gaps = 5/97 (5%)

Query: 6   EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGD----STCGQRALYQIGMTGIPV 61
              + P L KEA +KA+ + G   +++         G     +      L  +       
Sbjct: 98  VVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRY 157

Query: 62  FNVNNNCSTGSSALMLAKQFIESGSDCT-LALGFEKM 97
                 C  G + L LAK   E+      L +  E  
Sbjct: 158 MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVT 194

>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 200

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 40.5 bits (94), Expect = 8e-06
 Identities = 15/92 (16%), Positives = 26/92 (28%), Gaps = 5/92 (5%)

Query: 11  PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIP----VFNVNN 66
                  + +ALDDA +    +         G       A     M        +     
Sbjct: 76  KSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPIAQL 135

Query: 67  NCSTGSSALMLAKQFIESGSDCT-LALGFEKM 97
            C+ G +A+  A  F  +  +   L +  E  
Sbjct: 136 GCAAGGAAINRAHDFCTAYPEANALIVACEFC 167

>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 273

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

 Score = 36.7 bits (84), Expect = 2e-04
 Identities = 18/92 (19%), Positives = 30/92 (32%), Gaps = 5/92 (5%)

Query: 7   DTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIG-MTGIPV---- 61
                +L   AL   +D +G+   +V+    G         +        + G PV    
Sbjct: 21  SVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAG 80

Query: 62  FNVNNNCSTGSSALMLAKQFIESGSDCTLALG 93
             VN  C +G  A+  A + I +G        
Sbjct: 81  CTVNRLCGSGLEAVAQAARAIWAGEGKVYIGS 112

>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 372

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 34.8 bits (79), Expect = 0.001
 Identities = 10/86 (11%), Positives = 24/86 (27%), Gaps = 4/86 (4%)

Query: 11  PELAKEALIKALDDAGISINQVQQ----ACCGYVYGDSTCGQRALYQIGMTGIPVFNVNN 66
             LA +   +AL        ++         G++             +  +   V     
Sbjct: 93  VPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFM 152

Query: 67  NCSTGSSALMLAKQFIESGSDCTLAL 92
            C+   +AL  A  ++ +       +
Sbjct: 153 GCAAAMNALGTATNYVRAHPAMKALV 178

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	110
d1hnja1	174	Ketoacyl-ACP synthase III (FabH) {Escherichia coli	99.82
d1ulqa1	273	Beta-ketoadipyl CoA thiolase {Thermus thermophilus	99.82
d1u6ea1	184	Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu	99.81
d1mzja1	181	Priming beta-ketosynthase from the r1128 polyketid	99.8
d1m3ka1	268	Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3	99.8
d1ub7a1	172	Ketoacyl-ACP synthase III (FabH) {Thermus thermoph	99.8
d1wdkc1	262	Fatty oxidation complex beta subunit (3-ketoacyl-C	99.78
d1u0ma1	200	Putative polyketide synthase SCO1206 {Streptomyces	99.7
d1afwa1	269	Thiolase {Baker's yeast (Saccharomyces cerevisiae)	99.7
d1bi5a1	235	Chalcone synthase {Alfalfa (Medicago sativa) [TaxI	99.65
d1teda_	372	Polyketide synthase PKS18 {Mycobacterium tuberculo	99.62
d1xpma1	166	3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap	99.56
d1j3na1	249	Beta-ketoacyl-ACP synthase II {Thermus thermophilu	99.55
d2gfva1	250	Beta-ketoacyl-ACP synthase II {Escherichia coli [T	99.49
d1tqyb1	208	Actinorhodin polyketide putative beta-ketoacyl syn	99.49
d1tqya1	216	Actinorhodin polyketide putative beta-ketoacyl syn	99.49
d1ox0a1	256	Beta-ketoacyl-ACP synthase II {Streptococcus pneum	99.45
d1e5ma1	250	Beta-ketoacyl-ACP synthase II {Synechocystis sp. [	99.38
d2vbaa1	253	Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta	99.16
d2ix4a1	270	Beta-ketoacyl-ACP synthase II {Thale cress (Arabid	99.01
d1ub7a2	149	Ketoacyl-ACP synthase III (FabH) {Thermus thermoph	96.74
d1u6ea2	148	Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu	96.67
d1hnja2	143	Ketoacyl-ACP synthase III (FabH) {Escherichia coli	96.47
d1mzja2	153	Priming beta-ketosynthase from the r1128 polyketid	95.76
d1tqyb2	194	Actinorhodin polyketide putative beta-ketoacyl syn	94.4
d1ox0a2	158	Beta-ketoacyl-ACP synthase II {Streptococcus pneum	94.24
d1xhoa_	112	Chorismate mutase {Clostridium thermocellum [TaxId	93.55
d1okja1	106	Hypothetical protein YeaZ {Escherichia coli [TaxId	92.91
d2a6aa1	103	Hypothetical protein TM0874 {Thermotoga maritima [	92.49
d1ufya_	121	Chorismate mutase {Thermus thermophilus [TaxId: 27	91.27
d1teda_	372	Polyketide synthase PKS18 {Mycobacterium tuberculo	90.65
d1dbfa_	127	Chorismate mutase {Bacillus subtilis [TaxId: 1423]	90.47
d1u0ma2	148	Putative polyketide synthase SCO1206 {Streptomyces	89.72
d1e5ma2	161	Beta-ketoacyl-ACP synthase II {Synechocystis sp. [	88.39
d1afwa2	124	Thiolase {Baker's yeast (Saccharomyces cerevisiae)	88.13
d1ulqa2	125	Beta-ketoadipyl CoA thiolase {Thermus thermophilus	87.76
d1wdkc2	128	Fatty oxidation complex beta subunit (3-ketoacyl-C	86.57
d1m3ka2	124	Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3	86.47
d1j3na2	159	Beta-ketoacyl-ACP synthase II {Thermus thermophilu	85.81
d2gfva2	161	Beta-ketoacyl-ACP synthase II {Escherichia coli [T	85.62
d1tqya2	205	Actinorhodin polyketide putative beta-ketoacyl syn	85.03
d2ix4a2	161	Beta-ketoacyl-ACP synthase II {Thale cress (Arabid	83.13

>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=6.4e-20  Score=118.17  Aligned_cols=97  Identities=22%  Similarity=0.350  Sum_probs=88.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFI   82 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i   82 (110)
                      ++++..+|+.+|++++|+++++++++||.|++++.++++..|   ..+++.||+++.++++++.+|++++.+|.+|..++
T Consensus        47 ~~~~~~~la~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~~P~~a~~v~~~Lgl~~~~~~di~~~C~g~~~al~~A~~~i  126 (174)
T d1hnja1          47 PNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPAFDVAAACAGFTYALSVADQYV  126 (174)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCSSCEEEECCGGGHHHHHHHHHHHHH
T ss_pred             CCccchHHHHHHHHHhhhhcccccccccEEEEecCCccccccchhhhhhhccCCCchhhhhhhhhhccHHHHHHHHHHHH
Confidence            578999999999999999999999999999999998887544   35778999988899999999999999999999999


Q ss_pred             HcC-CCeEEEEeeccCCCCCC
Q psy13271         83 ESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        83 ~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      ++| ++++|++++|..|+...
T Consensus       127 ~sg~~~~~Lvv~~e~~S~~~~  147 (174)
T d1hnja1         127 KSGAVKYALVVGSDVLARTCD  147 (174)
T ss_dssp             HTTSCSEEEEEEEECHHHHSC
T ss_pred             hcCCcceeEEEeeehhhcccC
Confidence            999 99999999999876543

>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

Probab=99.82  E-value=7.2e-20  Score=125.25  Aligned_cols=98  Identities=21%  Similarity=0.315  Sum_probs=85.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcc----hhHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTC----GQRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQ   80 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~----~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~   80 (110)
                      ++.++.+|+..+++++|+++++++++||.|++|+..+....    ...++...|+. .+|+++|++.|+||+.+|..|++
T Consensus        20 ~~~~~~dL~~~a~~~al~~~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~vp~~tVn~~CaSg~~Ai~~a~~   99 (273)
T d1ulqa1          20 ASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAAR   99 (273)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCccceEEEecccchHHHHHHHHHH
Confidence            78999999999999999999999999999999988654322    22344456884 58999999999999999999999


Q ss_pred             HHHcC-CCeEEEEeeccCCCCCCC
Q psy13271         81 FIESG-SDCTLALGFEKMEKGSLG  103 (110)
Q Consensus        81 ~i~sG-~~~vlv~g~e~~s~~~~~  103 (110)
                      .|++| .|.+|++|+|+||+.|+.
T Consensus       100 ~I~~G~~d~~lagG~EsmS~~p~~  123 (273)
T d1ulqa1         100 AIWAGEGKVYIGSGVESMSRAPYA  123 (273)
T ss_dssp             HHHTTSCSEEEEEEEEESSSCCEE
T ss_pred             HHhcCCCccceeeeccccchhhhc
Confidence            99999 999999999999998864

>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway
species: Streptomyces sp. r1128 [TaxId: 140437]

Probab=99.80  E-value=3.9e-19  Score=115.10  Aligned_cols=97  Identities=20%  Similarity=0.223  Sum_probs=87.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFI   82 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i   82 (110)
                      ++++..+|+.+|++++|++++++++|||.||+++.++++..+   ..+++.+|.+++.+++++.+|++++.||.+|..++
T Consensus        54 ~~e~~~~ma~~Aa~~aL~~a~~~~~dId~li~~s~~~~~~~p~~a~~v~~~l~~~~~~~~Dv~~~C~g~~~aL~~A~~~i  133 (181)
T d1mzja1          54 PDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADNAGGFDLSAACAGFCHALSIAADAV  133 (181)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred             cCCcHHHHhHHHHHhhhhhccCChhHCeEEEEeccCCccccccHHHHHHHhhcCCCccceeHHhhhccHHHHHHHHhCHh
Confidence            678999999999999999999999999999999988876544   35678899888899999999999999999999999


Q ss_pred             HcC-CCeEEEEeeccCCCCCC
Q psy13271         83 ESG-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        83 ~sG-~~~vlv~g~e~~s~~~~  102 (110)
                      ++| .+++||+++|..|....
T Consensus       134 ~~~~~~~~LvV~~e~~s~~~~  154 (181)
T d1mzja1         134 ESGGSRHVLVVATERMTDVID  154 (181)
T ss_dssp             HHSSCSCEEEEEEEEGGGGSC
T ss_pred             hcCCCceeEEeeeccccccCC
Confidence            999 99999999999886543

>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=99.80  E-value=3.3e-19  Score=121.69  Aligned_cols=100  Identities=23%  Similarity=0.323  Sum_probs=87.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCc---chhHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDST---CGQRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~---~~~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      ++.++.+|+..+++++|++++++|++||.+++|+..+...   ....++-..|+. .+|+++|++.|+||+.++..|++.
T Consensus        23 ~~~~~~dL~~~~~~~~l~~~~i~~~~Id~vi~G~~~~~~~~~n~ar~~al~aglp~~vpa~tv~~~C~Sg~~Ai~~Aa~~  102 (268)
T d1m3ka1          23 ANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLAGSGLRAVALGMQQ  102 (268)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSEEEEEECGGGHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCcEEEEeeccccCcchHHHhHHHHHhCCcccccceeecccCcccchHHHHHHHH
Confidence            7899999999999999999999999999999998764332   222344567885 589999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCCCCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKGSLGAK  105 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~~~~~~  105 (110)
                      |++| .|.+|++|+|+||+.|+..+
T Consensus       103 I~~G~~dvvlagG~EsmS~~p~~~~  127 (268)
T d1m3ka1         103 IATGDASIIVAGGMESMSMAPHCAH  127 (268)
T ss_dssp             HHTTSCSCEEEEEEEESTTCCEEEC
T ss_pred             HhCCCceEEeeccccccccCchhhh
Confidence            9999 99999999999999886544

>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Thermus thermophilus [TaxId: 274]

Probab=99.80  E-value=6.4e-19  Score=113.26  Aligned_cols=97  Identities=21%  Similarity=0.173  Sum_probs=87.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFI   82 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i   82 (110)
                      ++++..+|+.+|++++|+++|++|+|||.||+++.++++..|   ..+++.||. +.++++++.+|++++.+|.+|..++
T Consensus        45 ~~e~~~~ma~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~~p~~a~~v~~~Lg~-~~~~~di~~~C~g~~~al~~a~~~~  123 (172)
T d1ub7a1          45 EDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL-KAFAYDLLAGCPGWIYALAQAHALV  123 (172)
T ss_dssp             TTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC-CCEEEEEECSTTHHHHHHHHHHHHH
T ss_pred             ccccccHHHHHHHHHHHhhcCcccccceEEEEecccccccccchHHHHHHHhcc-CccceeehhccccHHHHHHHHhhhh
Confidence            578999999999999999999999999999999988877554   357788995 4689999999999999999999999


Q ss_pred             HcC-CCeEEEEeeccCCCCCCC
Q psy13271         83 ESG-SDCTLALGFEKMEKGSLG  103 (110)
Q Consensus        83 ~sG-~~~vlv~g~e~~s~~~~~  103 (110)
                      ++| .+++||+++|..|.....
T Consensus       124 ~~~~~~~~Lvv~~e~~S~~~~~  145 (172)
T d1ub7a1         124 EAGLAQKVLAVGAEALSKIIDW  145 (172)
T ss_dssp             HTTSCSEEEEEEEECGGGTSCT
T ss_pred             hcCCcceeEEecccccccccCC
Confidence            999 999999999999876544

>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

Probab=99.78  E-value=1.4e-18  Score=118.21  Aligned_cols=100  Identities=21%  Similarity=0.228  Sum_probs=85.9

Q ss_pred             CCCCHHHHHHHHHHHHHHH-cCCCccccCeEEEEeecCCCcchhHHHH----HcCCC-CCCeeeEeccchHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDD-AGISINQVQQACCGYVYGDSTCGQRALY----QIGMT-GIPVFNVNNNCSTGSSALMLAK   79 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~-agl~~~~id~vi~~~~~~~~~~~~~~a~----~lg~~-~~~~~~i~~~C~sg~~al~~A~   79 (110)
                      ++.++.+|+..+++++|++ +|+++++||.|++|+..+....+.++++    ..|+. .+|+++|++.|+||+.++..|+
T Consensus        26 ~~~~~~dL~~~~i~~~l~r~agi~~~~Id~vi~G~v~~~~~~g~n~aR~~al~ag~p~~vp~~tV~~~C~Sgl~Ai~~aa  105 (262)
T d1wdkc1          26 RNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAA  105 (262)
T ss_dssp             TTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTSEEEEEECGGGHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHhcCCCCHHHeeEEEEEeecccccccccchhhhHhhhhcccccchhhccccccHHHHHHHHHH
Confidence            6789999999999999996 8999999999999988664433333443    34663 5899999999999999999999


Q ss_pred             HHHHcC-CCeEEEEeeccCCCCCCCCC
Q psy13271         80 QFIESG-SDCTLALGFEKMEKGSLGAK  105 (110)
Q Consensus        80 ~~i~sG-~~~vlv~g~e~~s~~~~~~~  105 (110)
                      +.|++| +|.+|++|+|.||+.|+...
T Consensus       106 ~~I~sG~~dvvlAgGvEsmS~~p~~~~  132 (262)
T d1wdkc1         106 QAIMTGNGDVFVVGGVEHMGHVSMMHG  132 (262)
T ss_dssp             HHHHTTSCSEEEEEEEEETTTSCTTTT
T ss_pred             HHHHhhcCCceeeeccccccccccccc
Confidence            999999 99999999999999987544

>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.70  E-value=1.3e-16  Score=104.43  Aligned_cols=94  Identities=15%  Similarity=0.153  Sum_probs=80.5

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch--hHHHHHcCCC-CCCeeeE-eccchHHHHHHHHHHHHHHc
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG--QRALYQIGMT-GIPVFNV-NNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~--~~~a~~lg~~-~~~~~~i-~~~C~sg~~al~~A~~~i~s   84 (110)
                      ...+|+.+|++++|+++|++++|||.||++++++...++  ..+...+|+. ++..+++ +.+|+++..+|..|..++++
T Consensus        74 ~a~~la~~Aa~~aL~~ag~~~~dId~lI~~s~t~~~~P~~aa~v~~~lg~~~~~~~~~i~~~gC~g~~~al~~A~~~l~~  153 (200)
T d1u0ma1          74 EAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTA  153 (200)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCChhhhheEEEeccCCCCcchhHHHHHHHHhcCCCeeEeccccchhhHHHHHHHHHHHHHHh
Confidence            467899999999999999999999999998877644332  3567889986 4678888 57999999999999999999


Q ss_pred             C-CCeEEEEeeccCCCCCC
Q psy13271         85 G-SDCTLALGFEKMEKGSL  102 (110)
Q Consensus        85 G-~~~vlv~g~e~~s~~~~  102 (110)
                      | .+++||+++|.+|....
T Consensus       154 ~~~~~vLvv~~e~~S~~~~  172 (200)
T d1u0ma1         154 YPEANALIVACEFCSLCYQ  172 (200)
T ss_dssp             STTCEEEEEEEEEGGGGCC
T ss_pred             CCCCEEEEEEEeccccccC
Confidence            9 99999999999886643

>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.70  E-value=1.1e-16  Score=109.08  Aligned_cols=99  Identities=24%  Similarity=0.364  Sum_probs=84.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHc----CCCccccCeEEEEeecCCCcchhHHH----HHcCCC-CCCeeeEeccchHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDA----GISINQVQQACCGYVYGDSTCGQRAL----YQIGMT-GIPVFNVNNNCSTGSSALM   76 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~a----gl~~~~id~vi~~~~~~~~~~~~~~a----~~lg~~-~~~~~~i~~~C~sg~~al~   76 (110)
                      ++.++.+|+..+++++++++    +++|++||.|++|+..+... ...++    -..|+. .+|+++|++.|+||+.||.
T Consensus        31 ~~~~~~~L~~~~i~~~l~r~~~~~~idp~~Id~vi~G~v~~~g~-~~~~aR~~al~aglp~~vpa~tVnr~CaSg~~Ai~  109 (269)
T d1afwa1          31 KDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGA-GATEHRAACLASGIPYSTPFVALNRQCSSGLTAVN  109 (269)
T ss_dssp             TTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGG-GHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhCCccccCChhhcCEEEecccccccc-ccccchhhhhhccccccccchhccccchHHHHHHH
Confidence            78999999999999999865    69999999999998765432 22333    346774 6899999999999999999


Q ss_pred             HHHHHHHcC-CCeEEEEeeccCCCCCCCCC
Q psy13271         77 LAKQFIESG-SDCTLALGFEKMEKGSLGAK  105 (110)
Q Consensus        77 ~A~~~i~sG-~~~vlv~g~e~~s~~~~~~~  105 (110)
                      .|++.|++| +|.+|++|+|.||+.|+...
T Consensus       110 ~Aa~~I~~G~~divlagG~EsmS~~p~~~~  139 (269)
T d1afwa1         110 DIANKIKVGQIDIGLALGVESMTNNYKNVN  139 (269)
T ss_dssp             HHHHHHHTTSCSEEEEEEEEEHHHHGGGSC
T ss_pred             HHHHHHhhccccceeeeecccccccccccc
Confidence            999999999 99999999999998776544

>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Chalcone synthase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=99.65  E-value=1.4e-15  Score=101.76  Aligned_cols=95  Identities=22%  Similarity=0.310  Sum_probs=79.2

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchh--HHHHHcCC-CCCCeeeE-eccchHHHHHHHHHHHHHHc
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQ--RALYQIGM-TGIPVFNV-NNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~--~~a~~lg~-~~~~~~~i-~~~C~sg~~al~~A~~~i~s   84 (110)
                      +..+|+.+|++++|+++|++++|||.||++++++++.++.  .+.+.+|+ .+...+.+ +.+|+++..+|..|..++++
T Consensus       101 ~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~p~~~a~~~~~l~~~~~~~~~~~~~~~C~g~~~al~~A~~~i~~  180 (235)
T d1bi5a1         101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAEN  180 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHcCCChhHCcEEEEecccCCccCccHHHHHHHHhcCCCceEEeeecCccchHHHHHHHHHHHHHc
Confidence            4557999999999999999999999999999988765443  34566776 44455554 78999999999999999999


Q ss_pred             C-CCeEEEEeeccCCCCCCC
Q psy13271         85 G-SDCTLALGFEKMEKGSLG  103 (110)
Q Consensus        85 G-~~~vlv~g~e~~s~~~~~  103 (110)
                      | .++|||+++|..|.....
T Consensus       181 ~~~~~vLvV~~E~~S~~~~~  200 (235)
T d1bi5a1         181 NKGARVLVVCSEVTAVTFRG  200 (235)
T ss_dssp             STTCEEEEEEEECGGGTCCC
T ss_pred             CCCCeEEEEEeeecceecCC
Confidence            9 999999999998866543

>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.62  E-value=1.4e-15  Score=107.16  Aligned_cols=92  Identities=15%  Similarity=0.140  Sum_probs=77.3

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCCC-CCeeeEe-ccchHHHHHHHHHHHHHH
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMTG-IPVFNVN-NNCSTGSSALMLAKQFIE   83 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~~-~~~~~i~-~~C~sg~~al~~A~~~i~   83 (110)
                      +..+|+.+|+++||+++|++++|||.||+++++ ++..|   ..+++.||+++ ...+.++ .+|++++.+|..|..+|+
T Consensus        91 ~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~l~  169 (372)
T d1teda_          91 HAVPLAVDVSKRALAGLPYRAAEIGLLVLATST-GFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVR  169 (372)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESS-CCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccC-CCCCchHHHHHHhhhccCCceeEeeccccCccHHHHHHHHHHHHHh
Confidence            456899999999999999999999999998876 34333   46788999975 3445565 589999999999999999


Q ss_pred             cC-CCeEEEEeeccCCCCC
Q psy13271         84 SG-SDCTLALGFEKMEKGS  101 (110)
Q Consensus        84 sG-~~~vlv~g~e~~s~~~  101 (110)
                      +| .+++||+++|..+...
T Consensus       170 sg~~~~~LVV~~E~~s~~~  188 (372)
T d1teda_         170 AHPAMKALVVCIELCSVNA  188 (372)
T ss_dssp             HSTTCEEEEEEEEECGGGC
T ss_pred             cCCCccceeeeehhhcccc
Confidence            99 9999999999876543

>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.56  E-value=4.3e-15  Score=94.46  Aligned_cols=93  Identities=13%  Similarity=0.236  Sum_probs=80.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcch---hHHHHHcCCC-CCCeeeEeccchHHHHHHHHHHHH
Q psy13271          6 EDTDYPELAKEALIKALDDAGISINQVQQACCGYVYGDSTCG---QRALYQIGMT-GIPVFNVNNNCSTGSSALMLAKQF   81 (110)
Q Consensus         6 ~~~~~~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~---~~~a~~lg~~-~~~~~~i~~~C~sg~~al~~A~~~   81 (110)
                      ++++..+|+.+|++++|++.  ++++||.+++++.++++..+   ..++..+|++ ...+++++.+|+++..+|.+|..+
T Consensus        46 ~~E~~~~ma~~Aa~~al~~~--~~~~id~li~~t~~~~~~~p~~a~~v~~~lg~~~~~~~~dv~~~C~g~~~al~~A~~~  123 (166)
T d1xpma1          46 VNQDIVSMGANAAKDIITDE--DKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDY  123 (166)
T ss_dssp             TTCCHHHHHHHHHHTTCCHH--HHHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHHH
T ss_pred             CccCHHHHHHHHHHhhhccc--cCCCCCeEEEeccccccccchhHHHHHHhhccccceEEeeecccHHHHHHHHHHHhhH
Confidence            57899999999999999875  57899999999888776544   3566789985 578999999999999999999999


Q ss_pred             HHcC-CCeEEEEeeccCCCC
Q psy13271         82 IESG-SDCTLALGFEKMEKG  100 (110)
Q Consensus        82 i~sG-~~~vlv~g~e~~s~~  100 (110)
                      +++| .+++||+++|..+..
T Consensus       124 i~~~~~~~alvV~sd~~~~~  143 (166)
T d1xpma1         124 LATRPNEKVLVIATDTARYG  143 (166)
T ss_dssp             HTTCTTCEEEEEEEEEECCC
T ss_pred             HhcCCCCeEEEEEEceEecc
Confidence            9999 999999999975544

>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

Probab=99.55  E-value=2.5e-14  Score=95.82  Aligned_cols=89  Identities=30%  Similarity=0.384  Sum_probs=74.4

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCc-----------------------------chhHHHHHcC
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQ----QACCGYVYGDST-----------------------------CGQRALYQIG   55 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~~-----------------------------~~~~~a~~lg   55 (110)
                      +...++.+++.+||+++|+++++++    ++++|+..+...                             ....++..+|
T Consensus        70 ~~~~~~l~aa~~Al~dAGl~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~g  149 (249)
T d1j3na1          70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG  149 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHcCCChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcC
Confidence            4456899999999999999988876    788887655421                             1124667899


Q ss_pred             CCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccCC
Q psy13271         56 MTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKME   98 (110)
Q Consensus        56 ~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~s   98 (110)
                      +++ |+++++++|+|++.||+.|+++|++| +|.+||+|+|...
T Consensus       150 l~G-p~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~  192 (249)
T d1j3na1         150 FTG-PSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAI  192 (249)
T ss_dssp             CCS-CBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred             CCC-CccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhh
Confidence            997 99999999999999999999999999 9999999999743

>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

Probab=99.49  E-value=1.5e-13  Score=91.92  Aligned_cols=88  Identities=23%  Similarity=0.337  Sum_probs=72.2

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCc-----------------------------chhHHHHHcC
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQ----QACCGYVYGDST-----------------------------CGQRALYQIG   55 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~~-----------------------------~~~~~a~~lg   55 (110)
                      ....|+..++++||+++|+++++++    ++++|+......                             ....++..+|
T Consensus        71 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g  150 (250)
T d2gfva1          71 AFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYG  150 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhcCCCccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhC
Confidence            3456889999999999999887766    677776543310                             0124667899


Q ss_pred             CCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccC
Q psy13271         56 MTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKM   97 (110)
Q Consensus        56 ~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~   97 (110)
                      +++ |+++++++|+|++.||..|+++|++| +|.+||+|+|..
T Consensus       151 l~G-p~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~  192 (250)
T d2gfva1         151 LRG-PSISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKA  192 (250)
T ss_dssp             CCS-CEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC
T ss_pred             CCC-CccccccccchhhhhhHHHHHHHHcCCcchhhcccchhh
Confidence            997 99999999999999999999999999 999999999963

>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.49  E-value=2.2e-13  Score=88.71  Aligned_cols=90  Identities=21%  Similarity=0.209  Sum_probs=73.5

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCc-----------------------------chhHHHHHcC
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQ----QACCGYVYGDST-----------------------------CGQRALYQIG   55 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~~-----------------------------~~~~~a~~lg   55 (110)
                      +...++..++.+||+++|+++++++    ++++++..+...                             ....++..+|
T Consensus        69 ~~~~~~~~a~~~Al~~Ag~~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g  148 (208)
T d1tqyb1          69 PSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHG  148 (208)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHT
T ss_pred             cccccccccccccchhhhcccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhccc
Confidence            3456889999999999999988875    677776544210                             0124677899


Q ss_pred             CCCCCeeeEeccchHHHHHHHHHHHHHHcCCCeEEEEeecc-CCC
Q psy13271         56 MTGIPVFNVNNNCSTGSSALMLAKQFIESGSDCTLALGFEK-MEK   99 (110)
Q Consensus        56 ~~~~~~~~i~~~C~sg~~al~~A~~~i~sG~~~vlv~g~e~-~s~   99 (110)
                      +++ |+++++++|+|++.||+.|+++|++|.|.+||+|+|. +++
T Consensus       149 l~G-p~~tv~tACaS~l~Ai~~A~~~I~~G~d~~lvGG~d~~l~p  192 (208)
T d1tqyb1         149 MRG-PSSALVAEQAGGLDALGHARRTIRRGTPLVVSGGVDSALDP  192 (208)
T ss_dssp             CCS-SCEEEECGGGHHHHHHHHHHHHHHHTCSEEEEEEEECCCSH
T ss_pred             ccc-eeeeccccccHHHHHHHHHHHHHHcCCCEEEECccccccCH
Confidence            997 9999999999999999999999999999999999996 443

>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.49  E-value=1.9e-13  Score=89.39  Aligned_cols=88  Identities=20%  Similarity=0.322  Sum_probs=70.6

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCc-----------------------------------chhH
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQ----QACCGYVYGDST-----------------------------------CGQR   49 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~~-----------------------------------~~~~   49 (110)
                      +...|+..|+++||+++|+++++++    ++++++..+...                                   ....
T Consensus        70 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  149 (216)
T d1tqya1          70 RASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAE  149 (216)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHH
T ss_pred             cchhhHHHHHHHHHHHhcCCccccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHHH
Confidence            3456899999999999999987765    456554432210                                   0124


Q ss_pred             HHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccC
Q psy13271         50 ALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKM   97 (110)
Q Consensus        50 ~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~   97 (110)
                      ++..+|+++ |.+++..+|+|++.||..|+++|++| +|.+||+|+|..
T Consensus       150 ia~~~g~~G-p~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~  197 (216)
T d1tqya1         150 VAWAVGAEG-PVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTP  197 (216)
T ss_dssp             HHHHHTCCS-CEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC
T ss_pred             HHHhcCccc-cceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence            566799987 99999999999999999999999999 999999999963

>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

Probab=99.38  E-value=3.1e-12  Score=85.00  Aligned_cols=86  Identities=23%  Similarity=0.333  Sum_probs=70.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCc-----------------------------chhHHHHHcCC
Q psy13271         10 YPELAKEALIKALDDAGISINQVQ----QACCGYVYGDST-----------------------------CGQRALYQIGM   56 (110)
Q Consensus        10 ~~~l~~~a~~~al~~agl~~~~id----~vi~~~~~~~~~-----------------------------~~~~~a~~lg~   56 (110)
                      ...++.+++.++|+++|++++.+.    ++++++..+...                             ....++..+|+
T Consensus        72 ~~~~~~~a~~~Al~~Agl~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl  151 (250)
T d1e5ma1          72 FCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA  151 (250)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHcCCChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhccC
Confidence            456899999999999999877664    677776543210                             01234567999


Q ss_pred             CCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeecc
Q psy13271         57 TGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEK   96 (110)
Q Consensus        57 ~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~   96 (110)
                      ++ |+++++++|+|++.||+.|.++|++| +|.+||+|+|.
T Consensus       152 ~G-p~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~  191 (250)
T d1e5ma1         152 KG-PNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEA  191 (250)
T ss_dssp             CS-CEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC
T ss_pred             CC-CCccccccchhhhhhhHHHhhcccCCcccccccccchh
Confidence            97 99999999999999999999999999 99999999996

>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

Probab=99.16  E-value=1.6e-10  Score=76.60  Aligned_cols=88  Identities=23%  Similarity=0.264  Sum_probs=68.2

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccC-----eEEEEeecCCCc------------------------------chhHHHHH
Q psy13271          9 DYPELAKEALIKALDDAGISINQVQ-----QACCGYVYGDST------------------------------CGQRALYQ   53 (110)
Q Consensus         9 ~~~~l~~~a~~~al~~agl~~~~id-----~vi~~~~~~~~~------------------------------~~~~~a~~   53 (110)
                      ....+...+..+++.++++..+...     ++++++..+...                              ....++..
T Consensus        70 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~  149 (253)
T d2vbaa1          70 DASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATP  149 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTT
T ss_pred             hhhhhhhHHHHHHHHHhhccchhccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceeccc
Confidence            3455888899999999998754322     566665543210                              01235567


Q ss_pred             cCCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccC
Q psy13271         54 IGMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKM   97 (110)
Q Consensus        54 lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~   97 (110)
                      +|+++ |.+++.++|+|++.||+.|+++|++| +|++||+|+|.+
T Consensus       150 ~g~~G-p~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~  193 (253)
T d2vbaa1         150 FKIHG-VNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEEL  193 (253)
T ss_dssp             TTCCS-CEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC
T ss_pred             cCccc-ceeeeeccchhHHHHHHHHHHhcchhccceeeecchhhh
Confidence            89987 99999999999999999999999999 999999999864

>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

Probab=99.01  E-value=2.2e-09  Score=71.31  Aligned_cols=48  Identities=27%  Similarity=0.438  Sum_probs=44.6

Q ss_pred             HHHHHcCCCCCCeeeEeccchHHHHHHHHHHHHHHcC-CCeEEEEeeccC
Q psy13271         49 RALYQIGMTGIPVFNVNNNCSTGSSALMLAKQFIESG-SDCTLALGFEKM   97 (110)
Q Consensus        49 ~~a~~lg~~~~~~~~i~~~C~sg~~al~~A~~~i~sG-~~~vlv~g~e~~   97 (110)
                      .++..+|+++ |+++++++|+|++.||++|+++|++| +|.+||+|++..
T Consensus       161 ~is~~~~l~G-p~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~  209 (270)
T d2ix4a1         161 HVSMKYGFQG-PNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESS  209 (270)
T ss_dssp             HHHHHHTCCS-CEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC
T ss_pred             HHHHHhCCCC-CCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhh
Confidence            4667899997 99999999999999999999999999 999999999874

>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Thermus thermophilus [TaxId: 274]

Probab=96.74  E-value=0.0051  Score=36.99  Aligned_cols=81  Identities=19%  Similarity=0.159  Sum_probs=48.5

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC-CCeeeE----eccchHHHHHHHHHHHHHHcC-C
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG-IPVFNV----NNNCSTGSSALMLAKQFIESG-S   86 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~-~~~~~i----~~~C~sg~~al~~A~~~i~sG-~   86 (110)
                      ...++++++|+++|++++|||.++.-..  ....-..+++.+|+.. .....+    +++.++-..+|..+.+.-+-. -
T Consensus        48 ~vp~~i~~~L~~~g~~~~dId~~i~Hqa--~~~~~~~i~~~lgi~~~k~~~~~~~~Gn~~sasip~~L~~~~~~~~~~~G  125 (149)
T d1ub7a2          48 VMNTATLEAIEKAGLTPEDIRLFVPHQA--NLRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKEAVDAGRIREG  125 (149)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCSEEEECCS--CHHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHTSSCTT
T ss_pred             HHHHHHHHHHHhhccccccccEEEeecc--chHHHHHHHhhccchhhHHHHHHHHhcCCcchhHHHHHHHHHHcCCCCCC
Confidence            4457789999999999999999886432  1122345677888853 112222    334444455555555442233 4


Q ss_pred             CeEEEEeec
Q psy13271         87 DCTLALGFE   95 (110)
Q Consensus        87 ~~vlv~g~e   95 (110)
                      |.+|+++.-
T Consensus       126 d~vll~g~G  134 (149)
T d1ub7a2         126 DHVLLVSFG  134 (149)
T ss_dssp             CEEEEEEEE
T ss_pred             CEEEEEEEc
Confidence            677776653

>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.67  E-value=0.011  Score=35.51  Aligned_cols=80  Identities=16%  Similarity=0.162  Sum_probs=49.6

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC-CCeee-E----eccchHHHHHHHHHHHHHHcC-
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG-IPVFN-V----NNNCSTGSSALMLAKQFIESG-   85 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~-~~~~~-i----~~~C~sg~~al~~A~~~i~sG-   85 (110)
                      ...++++++|+++|++++|||.++.-..  ....-..+++.||+.. ....+ +    ++++++-..+++.+.+.-+-. 
T Consensus        49 ~v~~~i~~~L~~~gl~~~dId~~i~Hqa--~~~i~~~v~~~lgl~~ek~~~~~~~~~GNt~sasip~~L~~a~~~g~i~~  126 (148)
T d1u6ea2          49 KMGDVGRRAMDAAGVRPDQIDVFVPHQA--NSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTTGAAKP  126 (148)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCCEEEECCS--CHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHHHTSSCT
T ss_pred             HHHHHHHHHHHHcCCCcccccEEEeccc--cHHHHHHHHHhcCCCchhhhhhhHHhhCCCccchHHHHHHHHHHcCCCCC
Confidence            4456789999999999999999986432  1222346778899853 22222 2    334555556666665542223 


Q ss_pred             CCeEEEEee
Q psy13271         86 SDCTLALGF   94 (110)
Q Consensus        86 ~~~vlv~g~   94 (110)
                      -|.+++++.
T Consensus       127 Gd~vll~gf  135 (148)
T d1u6ea2         127 GDLALLIGY  135 (148)
T ss_dssp             TCEEEEEEE
T ss_pred             CCEEEEEEE
Confidence            367776653

>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Escherichia coli [TaxId: 562]

Probab=96.47  E-value=0.01  Score=35.40  Aligned_cols=81  Identities=14%  Similarity=0.021  Sum_probs=49.3

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCCCC-eeeE----eccchHHHHHHHHHHHHHHcC-C
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTGIP-VFNV----NNNCSTGSSALMLAKQFIESG-S   86 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~~~-~~~i----~~~C~sg~~al~~A~~~i~sG-~   86 (110)
                      ...++++++|+++|++++|||.++.-..  ....-..+++.+|+..-. ...+    ++++++-..++..+.+.=+-. -
T Consensus        45 ~~~~~i~~~L~~~g~~~~dId~~i~Hq~--~~~~~~~~~~~l~l~~~k~~~~~~~~GN~~sasip~~L~~~~~~~~~~~G  122 (143)
T d1hnja2          45 ELAHIVDETLAANNLDRSQLDWLVPHQA--NLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPG  122 (143)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEEECCS--CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHTTCSCTT
T ss_pred             hhhHHHHHHHHHhhhcccccceEEeccC--chHHHHHHHHhCccchhhhhhhhhhhcccccchHHHHHHHHHHhCCCCCC
Confidence            3466788999999999999999986332  112234567888885311 2222    345555555665555432222 3


Q ss_pred             CeEEEEeec
Q psy13271         87 DCTLALGFE   95 (110)
Q Consensus        87 ~~vlv~g~e   95 (110)
                      |.+++++.-
T Consensus       123 d~vll~g~G  131 (143)
T d1hnja2         123 QLVLLEAFG  131 (143)
T ss_dssp             CEEEEEEEE
T ss_pred             CEEEEEEEe
Confidence            777777654

>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway
species: Streptomyces sp. r1128 [TaxId: 140437]

Probab=95.76  E-value=0.059  Score=32.24  Aligned_cols=44  Identities=14%  Similarity=0.095  Sum_probs=31.8

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG   58 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~   58 (110)
                      ...++++++|+++|++++|||.+++-..  ....-..+++.+|+..
T Consensus        49 ~vp~~i~~~L~~~gl~~~dId~~i~Hq~--~~~~~~~v~~~lgi~~   92 (153)
T d1mzja2          49 DVVPAAREALEVAGLTVGDLVAFVPHQA--NLRIIDVLVDRLGVPE   92 (153)
T ss_dssp             HHHHHHHHHHHTTTCCGGGCSEEEECCS--CHHHHHHHHHHHTCCT
T ss_pred             HHHHHHHHHHHHhCCCcccCCEEEEcCC--cHHHHHHHHHHhCCCc
Confidence            4456778999999999999999986332  1222346778899853

>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=94.40  E-value=0.027  Score=35.11  Aligned_cols=70  Identities=21%  Similarity=0.205  Sum_probs=46.9

Q ss_pred             HHHHHHHHHHcCCCccccCeEEEEeecCCCc-c---hhHHHHHcCCCCCCeeeE-----eccchHHHHHHHHHHHHHHcC
Q psy13271         15 KEALIKALDDAGISINQVQQACCGYVYGDST-C---GQRALYQIGMTGIPVFNV-----NNNCSTGSSALMLAKQFIESG   85 (110)
Q Consensus        15 ~~a~~~al~~agl~~~~id~vi~~~~~~~~~-~---~~~~a~~lg~~~~~~~~i-----~~~C~sg~~al~~A~~~i~sG   85 (110)
                      .++++++|++++++++|||.|-... ++... .   ...+.+.+|-...+...+     ...+++|+..+..+...++.|
T Consensus        65 ~~~i~~aL~~a~i~~~di~~v~ahg-tGt~~~D~~E~~al~~~f~~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g  143 (194)
T d1tqyb2          65 ERAIRLALNDAGTGPEDVDVVFADG-AGVPELDAAEARAIGRVFGREGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREG  143 (194)
T ss_dssp             HHHHHHHHHHHTCCGGGCCEEECCC-CCSHHHHHHHHHHHHHHHCTTCSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHT
T ss_pred             hhhhhhhcccccccccceeeeeccc-cCcccccHHHhhhhhhhhhccccccccccccccccccccccceehhhhhhhhhc
Confidence            4678899999999999999985422 11110 1   123445565443333322     357888999999999999999

>d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=94.24  E-value=0.021  Score=34.43  Aligned_cols=70  Identities=19%  Similarity=0.179  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCC-cc---hhHHHHHcCCCCCCeeeE-----eccchHHHHHHHHHHHHHHc
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDS-TC---GQRALYQIGMTGIPVFNV-----NNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~-~~---~~~~a~~lg~~~~~~~~i-----~~~C~sg~~al~~A~~~i~s   84 (110)
                      ..++++++|+++++++++||.|-.-. ++.. ..   ...+.+.+| ++.+...+     ..-.++|...+......++.
T Consensus        28 ~~~~~~~al~~a~l~p~~i~~v~aHg-tgT~~~D~~E~~ai~~~fg-~~~~v~s~Ks~iGH~~~asG~~~l~~~l~~l~~  105 (158)
T d1ox0a2          28 AIKAIKLALEEAEISPEQVAYVNAHG-TSTPANEKGESGAIVAVLG-KEVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRH  105 (158)
T ss_dssp             HHHHHHHHHHHHTCCGGGCCCEECCC-CSCHHHHHHHHHHHHHHHC-SSSEEECTHHHHCBCGGGHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhccccccceeeeEEeeec-cccccchhHHHHHHHHhcC-CcccCcCcccccccchhhhhhhhhccccccccc
Confidence            46789999999999999999885321 1111 11   123344555 23343322     35677888888888889998


Q ss_pred             C
Q psy13271         85 G   85 (110)
Q Consensus        85 G   85 (110)
                      |
T Consensus       106 g  106 (158)
T d1ox0a2         106 N  106 (158)
T ss_dssp             T
T ss_pred             c
Confidence            8

>d1xhoa_ d.79.1.2 (A:) Chorismate mutase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: YjgF-like
family: Chorismate mutase
domain: Chorismate mutase
species: Clostridium thermocellum [TaxId: 1515]

Probab=93.55  E-value=0.28  Score=27.82  Aligned_cols=47  Identities=15%  Similarity=0.166  Sum_probs=33.9

Q ss_pred             HHHHHHHHcCCCccccCeEEEEeecCCC--cchhHHHHHcCCCCCCeeeE
Q psy13271         17 ALIKALDDAGISINQVQQACCGYVYGDS--TCGQRALYQIGMTGIPVFNV   64 (110)
Q Consensus        17 a~~~al~~agl~~~~id~vi~~~~~~~~--~~~~~~a~~lg~~~~~~~~i   64 (110)
                      -..+.+++.+++++||-.+++. .++|.  .+|+..++.+|+..+|.+..
T Consensus        25 Ll~~ii~~N~l~~edi~Sv~FT-~T~DL~a~FPA~aaR~lG~~~Vpl~c~   73 (112)
T d1xhoa_          25 LLKEMAEKNGLEEDDIISIIFT-VTKDLDAAFPAIAARNMGWTSTALMCM   73 (112)
T ss_dssp             HHHHHHHHTTCCGGGEEEEEEE-ECTTCCSSCTHHHHHHTTCTTSEEEEE
T ss_pred             HHHHHHHHcCCCHHHEEEEEEE-ecCcccccCCHHHHhhcCCCccccccc
Confidence            3445567789999999888874 44553  35778888999988776543

>d1okja1 c.55.1.9 (A:1-106) Hypothetical protein YeaZ {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: YeaZ-like
domain: Hypothetical protein YeaZ
species: Escherichia coli [TaxId: 562]

Probab=92.91  E-value=0.075  Score=29.79  Aligned_cols=54  Identities=17%  Similarity=0.289  Sum_probs=35.1

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH----HHHHcCC-CCCCeeeEe
Q psy13271         11 PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQR----ALYQIGM-TGIPVFNVN   65 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~----~a~~lg~-~~~~~~~i~   65 (110)
                      .+.....++++|++++++++|||.++++..-+. +.+-+    .++.+.+ .++|.+.++
T Consensus        34 ~~~l~~~i~~~l~~~~~~~~di~~i~v~~GPGs-fTglRig~s~akgla~~~~ip~~~v~   92 (106)
T d1okja1          34 TQRILPMVQDILTTSGTSLTDINALAYGRGPGS-FTGVRIGIGIAQGLALGAELPMIGVS   92 (106)
T ss_dssp             TTTHHHHHHHHHHHTTCCGGGCCEEEEEEESSC-HHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             HHHHHHHHHHHHHhcCCcceeeeEEEEeeccCc-cccchHHHHHHHHHHHHcCCCEEEeC
Confidence            344556778999999999999999999776433 33322    2222221 245777665

>d2a6aa1 c.55.1.9 (A:1-103) Hypothetical protein TM0874 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: YeaZ-like
domain: Hypothetical protein TM0874
species: Thermotoga maritima [TaxId: 2336]

Probab=92.49  E-value=0.098  Score=29.06  Aligned_cols=54  Identities=22%  Similarity=0.313  Sum_probs=36.0

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhH----HHHHcCC-CCCCeeeEe
Q psy13271         11 PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQR----ALYQIGM-TGIPVFNVN   65 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~----~a~~lg~-~~~~~~~i~   65 (110)
                      .+.....+++.|++++++++|||.++++..-+ .+.+-+    .++.+.+ .+.|.+.++
T Consensus        34 s~~l~~~i~~~l~~~~~~~~di~~i~v~~GPG-sfTglRig~s~akgla~~~~ip~~gis   92 (103)
T d2a6aa1          34 AEILPVVVKKLLDELDLKVKDLDVVGVGIGPG-GLTGLRVGIATVVGLVSPYDIPVAPLN   92 (103)
T ss_dssp             GGHHHHHHHHHHHHHTCCGGGCSEEEEECCSS-CHHHHHHHHHHHHHHHGGGTCCEEEEC
T ss_pred             HHHHHHHHHHHHHHcCCCHHHhHHHhhcCCCC-cchhHHHHHHHHHHHHHHcCCCEEEeC
Confidence            45666778999999999999999999976543 333333    2232222 246777665

>d1ufya_ d.79.1.2 (A:) Chorismate mutase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: YjgF-like
family: Chorismate mutase
domain: Chorismate mutase
species: Thermus thermophilus [TaxId: 274]

Probab=91.27  E-value=0.51  Score=27.06  Aligned_cols=46  Identities=28%  Similarity=0.424  Sum_probs=32.9

Q ss_pred             HHHHHHHcCCCc-cccCeEEEEeecCCC--cchhHHHHHcCCCCCCeeeE
Q psy13271         18 LIKALDDAGISI-NQVQQACCGYVYGDS--TCGQRALYQIGMTGIPVFNV   64 (110)
Q Consensus        18 ~~~al~~agl~~-~~id~vi~~~~~~~~--~~~~~~a~~lg~~~~~~~~i   64 (110)
                      ..+.+++.++++ +||-.+++. .++|.  .+|+..++.+|+..+|.+..
T Consensus        27 l~~ii~~N~i~~~edi~Sv~FT-~T~DL~a~FPA~aaR~~G~~~VPlmc~   75 (121)
T d1ufya_          27 LLKMLEANGIQSYEELAAVIFT-VTEDLTSAFPAEAARQIGMHRVPLLSA   75 (121)
T ss_dssp             HHHHHHHHTCCCGGGEEEEEEE-ECTTCCSCCHHHHHHHTTGGGSCEEEE
T ss_pred             HHHHHHHcCCCChhhEEEEEEE-ecCcccccCCHHHHHhcCCCccccccc
Confidence            445566789986 889888874 44554  46788888899987776543

>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.65  E-value=0.32  Score=32.63  Aligned_cols=46  Identities=11%  Similarity=0.114  Sum_probs=33.0

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC
Q psy13271         11 PELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG   58 (110)
Q Consensus        11 ~~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~   58 (110)
                      .+...+.++++|+++|++++|||.++.-..  ....-..+.+.||+..
T Consensus       265 ~~~~~~~i~~~L~~~gl~~~did~~i~Hq~--~~~i~~~i~~~Lgl~~  310 (372)
T d1teda_         265 FSGVAPVVTEMLWDNGLQISDIDLWAIHPG--GPKIIEQSVRSLGISA  310 (372)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCSCEEECCS--CHHHHHHHHHHHTCCG
T ss_pred             HHHHHHHHHHHHHhcCCCHHHhhhhhccCc--cHHHHHHHHHHcCCCH
Confidence            345677889999999999999999886322  2222345677889853

>d1dbfa_ d.79.1.2 (A:) Chorismate mutase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: YjgF-like
family: Chorismate mutase
domain: Chorismate mutase
species: Bacillus subtilis [TaxId: 1423]

Probab=90.47  E-value=0.89  Score=26.21  Aligned_cols=47  Identities=19%  Similarity=0.205  Sum_probs=33.9

Q ss_pred             HHHHHHHHHcCCCccccCeEEEEeecCCC--cchhHHHHHc-CCCCCCeee
Q psy13271         16 EALIKALDDAGISINQVQQACCGYVYGDS--TCGQRALYQI-GMTGIPVFN   63 (110)
Q Consensus        16 ~a~~~al~~agl~~~~id~vi~~~~~~~~--~~~~~~a~~l-g~~~~~~~~   63 (110)
                      +-..+.+++.+++++||-.+++. .++|.  .+|+..++.+ |+..+|.+.
T Consensus        26 eLl~~ii~~N~l~~ediiSv~FT-~T~DL~a~FPA~aaR~~~G~~~Vplmc   75 (127)
T d1dbfa_          26 QLLEKIIEENHTKPEDVVQMLLS-ATPDLHAVFPAKAVRELSGWQYVPVTC   75 (127)
T ss_dssp             HHHHHHHHHHCCCGGGEEEEEEE-ECTTCCSSCTHHHHHTSTTCTTSCEEE
T ss_pred             HHHHHHHHHcCCCHHHEEEEEEE-ecccccccCcHHHHHhcCCCCccchhc
Confidence            33445567789999999988874 44554  4678888887 888777654

>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

Probab=89.72  E-value=0.22  Score=29.42  Aligned_cols=45  Identities=9%  Similarity=-0.070  Sum_probs=31.6

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHHHHHcCCCC
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRALYQIGMTG   58 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~a~~lg~~~   58 (110)
                      +-...+++++|+++|++++|||.+++-..  ....-..+.+.||+..
T Consensus        43 ~~~~~~i~~~l~~~g~~~~did~~~~Hq~--~~~i~~~i~~~Lgl~~   87 (148)
T d1u0ma2          43 EPLAPALKELAGEHGWDASDLDFYIVHAG--GPRILDDLSTFLEVDP   87 (148)
T ss_dssp             HHHHHHHHHHHHTTSCCSSCCSCCEEECS--HHHHHHHHHHHSCSCG
T ss_pred             HHHHHHHHHHHHHhCCCHHHCCEEEECCC--CHHHHHHHHHHhCCCh
Confidence            44567889999999999999998876432  1112235677888853

>d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

Probab=88.39  E-value=0.16  Score=30.40  Aligned_cols=74  Identities=19%  Similarity=0.089  Sum_probs=45.0

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEee-cC--CCcchhHHHHHcCC--CCCCeeeE-----eccchHHHHHHHHHHHH
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCGYV-YG--DSTCGQRALYQIGM--TGIPVFNV-----NNNCSTGSSALMLAKQF   81 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~~~-~~--~~~~~~~~a~~lg~--~~~~~~~i-----~~~C~sg~~al~~A~~~   81 (110)
                      +-..+++++||+++++++++||.|-.-.+ ++  |......+.+.++=  +..+...+     ..-.++|...+..+...
T Consensus        26 ~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~~~~~v~s~K~~~GH~~~AsG~~~l~~~l~~  105 (161)
T d1e5ma2          26 RGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMA  105 (161)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhccccCCCcceEEecccccccccccchhhHHHHhHHh
Confidence            34467889999999999999998864321 11  11001122233431  12222222     34667888888888999


Q ss_pred             HHcC
Q psy13271         82 IESG   85 (110)
Q Consensus        82 i~sG   85 (110)
                      ++.|
T Consensus       106 ~~~g  109 (161)
T d1e5ma2         106 IAED  109 (161)
T ss_dssp             HHHT
T ss_pred             cccC
Confidence            9988

>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.13  E-value=0.19  Score=29.15  Aligned_cols=68  Identities=12%  Similarity=0.173  Sum_probs=38.8

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHH--HHHcCCCCC------CeeeEe-ccchHHHHHHHHHHHHHHc
Q psy13271         14 AKEALIKALDDAGISINQVQQACCGYVYGDSTCGQRA--LYQIGMTGI------PVFNVN-NNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~--a~~lg~~~~------~~~~i~-~~C~sg~~al~~A~~~i~s   84 (110)
                      -..|++++|+++|++.+|||.+=+.    +-+..+.+  .+.+++..-      -...+. .-.+||..-+......++.
T Consensus        26 Pv~Ai~klL~r~gl~~~Did~~Ein----EAFA~q~l~~~~~l~id~~kvN~~GGaiAlGHP~GaSGarlv~~l~~~L~~  101 (124)
T d1afwa2          26 PAYAIPKVLEATGLQVQDIDIFEIN----EAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKK  101 (124)
T ss_dssp             HHHHHHHHHHHHTCCGGGCSEEEEC----CSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCT
T ss_pred             hHHHHHHHHHHcCCCcccCcEEEec----cchhHHHHHHHHHcCCChhhccccCccceecCCcCCchHHHHHHHHHHhcc
Confidence            3678899999999999999988553    33334433  345555310      111111 1233555555555555565


Q ss_pred             C
Q psy13271         85 G   85 (110)
Q Consensus        85 G   85 (110)
                      +
T Consensus       102 ~  102 (124)
T d1afwa2         102 D  102 (124)
T ss_dssp             T
T ss_pred             C
Confidence            6

>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

Probab=87.76  E-value=0.23  Score=28.76  Aligned_cols=24  Identities=29%  Similarity=0.272  Sum_probs=21.0

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEE
Q psy13271         14 AKEALIKALDDAGISINQVQQACC   37 (110)
Q Consensus        14 ~~~a~~~al~~agl~~~~id~vi~   37 (110)
                      -..|++++|+++|++.+|||.+=+
T Consensus        23 P~~A~~~~L~r~gl~~~Did~~Ei   46 (125)
T d1ulqa2          23 PVPATRKALERAGLSFSDLGLIEL   46 (125)
T ss_dssp             HHHHHHHHHHHTTCCGGGCSEEEE
T ss_pred             cHHHHHhHhhccCcCccccchhee
Confidence            367899999999999999998855

>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

Probab=86.57  E-value=0.25  Score=28.70  Aligned_cols=24  Identities=25%  Similarity=0.267  Sum_probs=20.9

Q ss_pred             HHHHHHHHHHcCCCccccCeEEEE
Q psy13271         15 KEALIKALDDAGISINQVQQACCG   38 (110)
Q Consensus        15 ~~a~~~al~~agl~~~~id~vi~~   38 (110)
                      ..|++++|++++++.+|||.+=+.
T Consensus        26 ~~A~~klL~ragl~~~did~~Ein   49 (128)
T d1wdkc2          26 VPATQKALKRAGLNMADIDFIELN   49 (128)
T ss_dssp             HHHHHHHHHHHTCCGGGCCEEEEC
T ss_pred             HHHHHHHhhhcCccccccceEEee
Confidence            568899999999999999988553

>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=86.47  E-value=0.26  Score=28.47  Aligned_cols=72  Identities=19%  Similarity=0.157  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHcCCCccccCeEEEEeecCCCcchhHH--HHHcCCCC-C-----CeeeE--eccchHHHHHHHHHHHHHHc
Q psy13271         15 KEALIKALDDAGISINQVQQACCGYVYGDSTCGQRA--LYQIGMTG-I-----PVFNV--NNNCSTGSSALMLAKQFIES   84 (110)
Q Consensus        15 ~~a~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~--a~~lg~~~-~-----~~~~i--~~~C~sg~~al~~A~~~i~s   84 (110)
                      ..|++++|+++|++.+|||.+=+.    +-+..+.+  .+.+|+.. .     -...+  --+|++.-..+.....+.+.
T Consensus        25 v~A~~~lL~r~gl~~~Did~~Ein----EAFA~q~la~~~~l~id~~kvN~~GGaiAlGHP~GaSGarl~~tl~~~L~~~  100 (124)
T d1m3ka2          25 IPASRKALERAGWKIGDLDLVEAN----EAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR  100 (124)
T ss_dssp             HHHHHHHHHHHTCCGGGCSEEEEC----CSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhcccHHHhc----ccchhheeeehHhhCCChhhcCCCCCccccccCcCccchhHHHHHHHHHHhc
Confidence            578899999999999999987553    33334433  35566531 0     11111  13554444555666666665


Q ss_pred             CCCeEE
Q psy13271         85 GSDCTL   90 (110)
Q Consensus        85 G~~~vl   90 (110)
                      +.++.+
T Consensus       101 ~~~~Gl  106 (124)
T d1m3ka2         101 GARKGL  106 (124)
T ss_dssp             TCSEEE
T ss_pred             CCCEEE
Confidence            544544

>d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

Probab=85.81  E-value=0.36  Score=28.70  Aligned_cols=74  Identities=22%  Similarity=0.096  Sum_probs=44.2

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEE-eecC--CCcchhHHHHHcCC--CCCCeee-----EeccchHHHHHHHHHHHH
Q psy13271         12 ELAKEALIKALDDAGISINQVQQACCG-YVYG--DSTCGQRALYQIGM--TGIPVFN-----VNNNCSTGSSALMLAKQF   81 (110)
Q Consensus        12 ~l~~~a~~~al~~agl~~~~id~vi~~-~~~~--~~~~~~~~a~~lg~--~~~~~~~-----i~~~C~sg~~al~~A~~~   81 (110)
                      +-..++++++|+++|++|++||.|-.- +.++  |......+.+.++-  ...+...     =...+++|+..+..+...
T Consensus        26 ~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i~s~K~~~GH~~~asG~~~li~~~~~  105 (159)
T d1j3na2          26 KGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQA  105 (159)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred             HHHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHHHHhcCCCceEecccccccccccccccchhhhhhhH
Confidence            445677899999999999999998642 2221  11101112222211  1111111     135678889899888888


Q ss_pred             HHcC
Q psy13271         82 IESG   85 (110)
Q Consensus        82 i~sG   85 (110)
                      ++.+
T Consensus       106 l~~~  109 (159)
T d1j3na2         106 LYHG  109 (159)
T ss_dssp             HHHT
T ss_pred             hhCC
Confidence            8888

>d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

Probab=85.62  E-value=0.28  Score=29.19  Aligned_cols=73  Identities=21%  Similarity=0.155  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEE-EeecC--CCcchhHHHHHcCC--CCCCeeeE-----eccchHHHHHHHHHHHHH
Q psy13271         13 LAKEALIKALDDAGISINQVQQACC-GYVYG--DSTCGQRALYQIGM--TGIPVFNV-----NNNCSTGSSALMLAKQFI   82 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~-~~~~~--~~~~~~~~a~~lg~--~~~~~~~i-----~~~C~sg~~al~~A~~~i   82 (110)
                      -..++++++|++++++|+|||.|-. ++.++  |......+.+.++-  ...+...+     ..-.++|+..+..+...+
T Consensus        27 ~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i~s~Ks~~GH~~~AsG~~~li~~ll~l  106 (161)
T d2gfva2          27 GAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILAL  106 (161)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTTSEEECTHHHHCBCGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHHhccccccceeccccccccccHHHHHHHHHHHHHHHh
Confidence            3457789999999999999997753 22111  11111123333432  11121111     356778888888888899


Q ss_pred             HcC
Q psy13271         83 ESG   85 (110)
Q Consensus        83 ~sG   85 (110)
                      +.|
T Consensus       107 ~~~  109 (161)
T d2gfva2         107 RDQ  109 (161)
T ss_dssp             HSC
T ss_pred             cCC
Confidence            988

>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

Probab=85.03  E-value=0.39  Score=29.70  Aligned_cols=72  Identities=17%  Similarity=0.154  Sum_probs=46.0

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCc-ch---hHHHHHcCC--CCCCeeeE-----eccchHHHHHHHHHHHH
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCGYVYGDST-CG---QRALYQIGM--TGIPVFNV-----NNNCSTGSSALMLAKQF   81 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~~~~~~~~-~~---~~~a~~lg~--~~~~~~~i-----~~~C~sg~~al~~A~~~   81 (110)
                      -..++++++|+++++++++||.|-.- .++... .+   ..+...++-  +..+...+     ..-.++|+..+..+...
T Consensus        66 ~~~~~~~~al~~a~i~~~~i~~ie~h-gtGt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~  144 (205)
T d1tqya2          66 EMAETIRVALDESRTDATDIDYINAH-GSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLA  144 (205)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCCEEECC-CCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHH
T ss_pred             ccchhhhhHHhhhcCCccceeeeecc-ccccccCchhHHHHHHHhhccccCCceeeeecccccccccccchhHHHHHHHH
Confidence            35567889999999999999987642 122111 11   123344432  22333332     35678899999999999


Q ss_pred             HHcC
Q psy13271         82 IESG   85 (110)
Q Consensus        82 i~sG   85 (110)
                      ++.|
T Consensus       145 l~~g  148 (205)
T d1tqya2         145 LEHG  148 (205)
T ss_dssp             HHHC
T ss_pred             HhCC
Confidence            9998

>d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

Probab=83.13  E-value=0.55  Score=27.88  Aligned_cols=73  Identities=15%  Similarity=0.091  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEE-eecC--CCcchhHHHHHcCC----CCCCeee-----EeccchHHHHHHHHHHH
Q psy13271         13 LAKEALIKALDDAGISINQVQQACCG-YVYG--DSTCGQRALYQIGM----TGIPVFN-----VNNNCSTGSSALMLAKQ   80 (110)
Q Consensus        13 l~~~a~~~al~~agl~~~~id~vi~~-~~~~--~~~~~~~~a~~lg~----~~~~~~~-----i~~~C~sg~~al~~A~~   80 (110)
                      -...+++++|++++++++|||.|-.- +.++  |......+.+.++-    ...+...     =....++|...+..+..
T Consensus        25 ~~~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~~~i~s~K~~~GH~~~AsG~~~li~~~l  104 (161)
T d2ix4a2          25 GAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSIL  104 (161)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhhhcccccccceeeeccccccCCccchHHHHHHHHHHH
Confidence            34467889999999999999988542 2221  11111122233321    1122211     13567888888888899


Q ss_pred             HHHcC
Q psy13271         81 FIESG   85 (110)
Q Consensus        81 ~i~sG   85 (110)
                      .++.|
T Consensus       105 ~l~~~  109 (161)
T d2ix4a2         105 AIHHG  109 (161)
T ss_dssp             HHHHT
T ss_pred             HHhcC
Confidence            99988