Psyllid ID: psy13309
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1568 | 2.2.26 [Sep-21-2011] | |||||||
| Q24498 | 5127 | Ryanodine receptor 44F OS | yes | N/A | 0.753 | 0.230 | 0.678 | 0.0 | |
| Q92736 | 4967 | Ryanodine receptor 2 OS=H | yes | N/A | 0.707 | 0.223 | 0.441 | 0.0 | |
| P16960 | 5035 | Ryanodine receptor 1 OS=S | no | N/A | 0.734 | 0.228 | 0.450 | 0.0 | |
| P30957 | 4969 | Ryanodine receptor 2 OS=O | yes | N/A | 0.705 | 0.222 | 0.442 | 0.0 | |
| B0LPN4 | 4953 | Ryanodine receptor 2 OS=R | yes | N/A | 0.707 | 0.223 | 0.437 | 0.0 | |
| E9Q401 | 4966 | Ryanodine receptor 2 OS=M | yes | N/A | 0.707 | 0.223 | 0.435 | 0.0 | |
| E9PZQ0 | 5035 | Ryanodine receptor 1 OS=M | no | N/A | 0.730 | 0.227 | 0.448 | 0.0 | |
| P11716 | 5037 | Ryanodine receptor 1 OS=O | no | N/A | 0.730 | 0.227 | 0.446 | 0.0 | |
| P21817 | 5038 | Ryanodine receptor 1 OS=H | no | N/A | 0.730 | 0.227 | 0.446 | 0.0 | |
| A2AGL3 | 4863 | Ryanodine receptor 3 OS=M | no | N/A | 0.716 | 0.230 | 0.426 | 0.0 |
| >sp|Q24498|RY44_DROME Ryanodine receptor 44F OS=Drosophila melanogaster GN=Rya-r44F PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 1798 bits (4657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 915/1349 (67%), Positives = 1029/1349 (76%), Gaps = 167/1349 (12%)
Query: 1 YLACLSTSSSNDKLSFDVGLQEHSQGEACWWTVHPASKQRSEGEKVRVGDDLILVSVATE 60
YLACLSTSSSNDKLSFDVGLQEHSQGEACWWTVHPASKQRSEGEKVRVGDDLILVSVATE
Sbjct: 113 YLACLSTSSSNDKLSFDVGLQEHSQGEACWWTVHPASKQRSEGEKVRVGDDLILVSVATE 172
Query: 61 RYLHTTKENDLSVVNASFHVTHWSVQPYGTGISRMKYVMCLEVMSCGSSTEVTNVSLYLH 120
RYLHTTKEN+ S+VNASFHVTHWSVQPYGTGISRMKYV +V + H
Sbjct: 173 RYLHTTKENEQSIVNASFHVTHWSVQPYGTGISRMKYV---------GYVFGGDVLRFFH 223
Query: 121 PG---LICPDR--SKYLFHIVVYEGGSVMSQARSLWRLELARTKWAGGFINWYHPMRIRH 175
G L P + +IV+YEGG VM+QARSLWRLELARTKW GGFINWYHPMRIRH
Sbjct: 224 GGDECLTIPSTWGREAGQNIVIYEGGVVMAQARSLWRLELARTKWTGGFINWYHPMRIRH 283
Query: 176 LTTGRYLSTNENNELYLVTRDEATTASSTFCLRQEKDDQKIVLEDKDLEVIGAPIIKYGD 235
+TTGRYL N++NEL LV ++EA+ A++TFCLRQEKDD+K VLEDKDLEVIG+PIIKYGD
Sbjct: 284 ITTGRYLGVNDSNELILVKKEEASIATTTFCLRQEKDDEKKVLEDKDLEVIGSPIIKYGD 343
Query: 236 STVLVQHSENGLWLTYKSYETKKKGLGKVEEKQAVLHEEGKMDDGLDFSRSQEEESRTAR 295
+TV+VQH E LWL+YKSYETKKKG+GKVEEKQA+LHEEGKMDD LDFSRSQEEES+TAR
Sbjct: 344 TTVIVQHCETSLWLSYKSYETKKKGVGKVEEKQAILHEEGKMDDCLDFSRSQEEESKTAR 403
Query: 296 VIRKCSSLFTQFISGLEALQVNRRHSLFCASVNLNEMVMCLEDLINYFAQPEEDMEHEEK 355
VIRKCSSLFTQFI+ LE LQ NRRHS+F VNLNEMVMCLEDLINYF+QPE+DMEHEEK
Sbjct: 404 VIRKCSSLFTQFITALETLQSNRRHSIFFQKVNLNEMVMCLEDLINYFSQPEDDMEHEEK 463
Query: 356 QNRLRALRNRQDLFQEEGILNLILEAIDKINVITSQGFLVN-LAGDESGQSWDIISGYLY 414
QNR RALRNRQDLFQEEG+LNLILEAIDKIN+ITSQGFL + LAGDE+GQSWD+IS YLY
Sbjct: 464 QNRFRALRNRQDLFQEEGVLNLILEAIDKINIITSQGFLASFLAGDETGQSWDLISTYLY 523
Query: 415 QLLAAIIKGNHTNCAQFANTNRLNWLFSRLGSQASSEGTGMLDVLHCVLIDSPEALNMMR 474
QLLAAIIKGNHTNCAQFAN+NRLNWLFSRLGSQASSEG+GM
Sbjct: 524 QLLAAIIKGNHTNCAQFANSNRLNWLFSRLGSQASSEGSGM------------------- 564
Query: 475 DEHIKVIISLLEKHGRDPKVLDVLCSLCVGNGVAVRSSQNNICDYLLPGKNLLLQTQLDE 534
LDVL + + + A L DE
Sbjct: 565 --------------------LDVLHCVLIDSPEA-------------------LNMMRDE 585
Query: 535 HIKVIISLLEKHGRDPKVLDVLCSLCVGNGVAVRSSQNNICDYLLPGKNLLLQTQLVDHV 594
HIKVIISLLEKHGRDPKVLDVLCSLCVGNGVAVRSSQNNICD+LLPGKNLLLQT LVDHV
Sbjct: 586 HIKVIISLLEKHGRDPKVLDVLCSLCVGNGVAVRSSQNNICDFLLPGKNLLLQTLLVDHV 645
Query: 595 AS-----------------------------------------------YVPYPGGGEKW 607
AS YVPYPGGG+KW
Sbjct: 646 ASIRPNIFVGRVDGSSMYQKWYFEVTMDHIEQTTHMMPHLRIGWANTSGYVPYPGGGKKW 705
Query: 608 GGNGVGDDLYSFGFDGAHLWTGGRRTEVIPGT-LEPYIKKGDVIGVALDLSIPIITFTFN 666
GGNGVGDDLYSFGFDGA LWTGGR+T V+ EP+I+KGDVIGVA+DLS+PIITFTFN
Sbjct: 706 GGNGVGDDLYSFGFDGAFLWTGGRKTLVVDALPEEPFIRKGDVIGVAIDLSVPIITFTFN 765
Query: 667 GSLVSGAFRDFNLDGMFFPVISCSSKLSCRFLFGGDHGRLKYIPPEEFSPLVESLLPHQV 726
G V G+FRDFNLDGMFFPV+SCSSKLSCRFLFGGDHGRLK+ PP FS LV+ L+P Q+
Sbjct: 766 GVKVRGSFRDFNLDGMFFPVMSCSSKLSCRFLFGGDHGRLKFAPPMGFSALVQCLMPQQI 825
Query: 727 LSIDPCFYFGNLPKVVLAGPWHVEDDTAFVPTPVDTSMITLPHYVENIRDKLAENIHEMW 786
LS+DPCFYFGNL K VLAGPW +EDDTAFVP PVDT+ +TLP V+ I++KLAENIHEMW
Sbjct: 826 LSLDPCFYFGNLAKNVLAGPWLIEDDTAFVPKPVDTTGVTLPSSVDQIKEKLAENIHEMW 885
Query: 787 AMNKIEAGWMYGERRDDVRKIHPCLIQFERRIWRLCSRISRLCSRIRSETSILFYHPPRV 846
A+NKIEAGW +GE RDD +IHPCL FE+ L + R +++ +T
Sbjct: 886 ALNKIEAGWSWGEHRDDYHRIHPCLTHFEK----LPAAEKRYDNQLAVQT---------- 931
Query: 847 KFHAKVLPTILAIGYHISMDKPPSRIKTVRLPNEPFMQPNGYKPAPLDLSAIALTPKMEE 906
L TI+++GY+I+MDKPP+RI+ VRLPNE FMQ NGYKPAPLDLSA+ LTPK+EE
Sbjct: 932 ------LKTIISLGYYITMDKPPARIRPVRLPNEIFMQGNGYKPAPLDLSAVTLTPKLEE 985
Query: 907 LVDQLAENTHNLWAKERIQQGWTYGLNEDPDMARSPHLVPYGKVDDAIKKANRDTASETV 966
LVDQLAENTHNLWA+ERIQQGWTYGLNED + RSPHLVPY KVD+AIKKANRDTASETV
Sbjct: 986 LVDQLAENTHNLWARERIQQGWTYGLNEDSENHRSPHLVPYAKVDEAIKKANRDTASETV 1045
Query: 967 RTLLVYGYNLDPPTGEQQDALLAEQNRIRFMSFRTYRAEKNYAVSSGKWYFEFEILTAGP 1026
RTLLVYGY LDPPTGE +ALLAE R++F FRTYR E+NYAV+SGKWYFEFE+LT+GP
Sbjct: 1046 RTLLVYGYVLDPPTGEGTEALLAEAQRLKFAGFRTYRVERNYAVTSGKWYFEFEVLTSGP 1105
Query: 1027 MRVGWARVDCAPGAQLGSDENSWAFDGFN---------RHIKINLFQQ-------DKKDY 1070
MRVGWAR DC PGA LGS++ SWAFDG N H + D K+
Sbjct: 1106 MRVGWARADCYPGAMLGSEDTSWAFDGHNVTKMHAGSIEHFGVRYEAGDVIGCFIDVKEQ 1165
Query: 1071 SISGFSLNGELLMDALGGETTFADV--QGEGFVPACTLGVGQRAKLTFGQDVNQLKYFSM 1128
+IS FSLNGELLMDALGGETTFADV +G GFVPACTLGVGQ+A+L +GQDV+ LK+F+
Sbjct: 1166 TIS-FSLNGELLMDALGGETTFADVTAEGVGFVPACTLGVGQKARLIYGQDVDSLKFFTT 1224
Query: 1129 CGLQEGYEPFCVNMKRAVTYWYTRDQPIFENTDDYPSV-IDVTRIPAGSDTPPCLKISHN 1187
CGLQEGYEPFCVNM+R VT+WYT+DQPIFENT++ P IDVTRIP G+DTPP LKISHN
Sbjct: 1225 CGLQEGYEPFCVNMRRPVTHWYTKDQPIFENTEEMPDCRIDVTRIPGGADTPPHLKISHN 1284
Query: 1188 TFETMEKANWEFLRLSLPVTCMSTFIDENEKQRRWKEIRNRQQILMMEA------VDNTT 1241
TFETMEKANWEFLRLSLPVTCM FI E EK RRW EI+NRQ LM EA T
Sbjct: 1285 TFETMEKANWEFLRLSLPVTCMGEFISEQEKARRWDEIKNRQYRLMREAEIAAQMQVQTQ 1344
Query: 1242 PAHIEQIMKSGFSMSDIKGKSASLPASVD 1270
AH++ ++K GF+M+DIKG + + D
Sbjct: 1345 AAHMDHMLKGGFNMNDIKGLTRNFDEHAD 1373
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Intracellular calcium channel that is required for proper muscle function during embryonic development and may be essential for excitation-contraction coupling in larval body wall muscles. Drosophila melanogaster (taxid: 7227) |
| >sp|Q92736|RYR2_HUMAN Ryanodine receptor 2 OS=Homo sapiens GN=RYR2 PE=1 SV=3 | Back alignment and function description |
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| >sp|P16960|RYR1_PIG Ryanodine receptor 1 OS=Sus scrofa GN=RYR1 PE=2 SV=2 | Back alignment and function description |
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| >sp|P30957|RYR2_RABIT Ryanodine receptor 2 OS=Oryctolagus cuniculus GN=RYR2 PE=1 SV=3 | Back alignment and function description |
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| >sp|B0LPN4|RYR2_RAT Ryanodine receptor 2 OS=Rattus norvegicus GN=Ryr2 PE=1 SV=2 | Back alignment and function description |
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| >sp|E9Q401|RYR2_MOUSE Ryanodine receptor 2 OS=Mus musculus GN=Ryr2 PE=1 SV=1 | Back alignment and function description |
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| >sp|E9PZQ0|RYR1_MOUSE Ryanodine receptor 1 OS=Mus musculus GN=Ryr1 PE=1 SV=1 | Back alignment and function description |
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| >sp|P11716|RYR1_RABIT Ryanodine receptor 1 OS=Oryctolagus cuniculus GN=RYR1 PE=1 SV=1 | Back alignment and function description |
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| >sp|P21817|RYR1_HUMAN Ryanodine receptor 1 OS=Homo sapiens GN=RYR1 PE=1 SV=3 | Back alignment and function description |
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| >sp|A2AGL3|RYR3_MOUSE Ryanodine receptor 3 OS=Mus musculus GN=Ryr3 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1568 | ||||||
| 389568471 | 5115 | ryanodine receptor [Laodelphax striatell | 0.794 | 0.243 | 0.711 | 0.0 | |
| 389568467 | 5142 | ryanodine receptor [Bemisia tabaci] | 0.746 | 0.227 | 0.744 | 0.0 | |
| 328717378 | 5101 | PREDICTED: ryanodine receptor 44F-like i | 0.744 | 0.228 | 0.735 | 0.0 | |
| 270003382 | 4986 | hypothetical protein TcasGA2_TC002610 [T | 0.743 | 0.233 | 0.731 | 0.0 | |
| 383851977 | 5084 | PREDICTED: ryanodine receptor 44F-like [ | 0.765 | 0.236 | 0.705 | 0.0 | |
| 350396439 | 5108 | PREDICTED: ryanodine receptor 44F-like [ | 0.765 | 0.235 | 0.706 | 0.0 | |
| 340710638 | 5108 | PREDICTED: ryanodine receptor 44F-like [ | 0.765 | 0.235 | 0.705 | 0.0 | |
| 380026505 | 5026 | PREDICTED: LOW QUALITY PROTEIN: ryanodin | 0.744 | 0.232 | 0.718 | 0.0 | |
| 328789627 | 5082 | PREDICTED: ryanodine receptor 44F [Apis | 0.744 | 0.229 | 0.717 | 0.0 | |
| 307197748 | 5080 | Ryanodine receptor 44F [Harpegnathos sal | 0.745 | 0.230 | 0.716 | 0.0 |
| >gi|389568471|gb|AFK84959.1| ryanodine receptor [Laodelphax striatella] | Back alignment and taxonomy information |
|---|
Score = 1956 bits (5066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1008/1416 (71%), Positives = 1095/1416 (77%), Gaps = 170/1416 (12%)
Query: 1 YLACLSTSSSNDKLSFDVGLQEHSQGEACWWTVHPASKQRSEGEKVRVGDDLILVSVATE 60
YLACLSTSSSNDKLSFDVGLQEHSQGEACWWTVHPASKQRSEGEKVRVGDDLILVSVATE
Sbjct: 98 YLACLSTSSSNDKLSFDVGLQEHSQGEACWWTVHPASKQRSEGEKVRVGDDLILVSVATE 157
Query: 61 RYLHTTKENDLSVVNASFHVTHWSVQPYGTGISRMKYVM------CLEVMSCGSSTEVTN 114
RYLHTTKENDLS+VNASFHVTHWSVQPYGTGISRMKYV L G
Sbjct: 158 RYLHTTKENDLSIVNASFHVTHWSVQPYGTGISRMKYVGYVFGGDVLRFFHGGDECLTIP 217
Query: 115 VSLYLHPGLICPDRSKYLFHIVVYEGGSVMSQARSLWRLELARTKWAGGFINWYHPMRIR 174
+ PG +IVVYEGGSVMSQARSLWRLELARTKWAGGFINWYHPMRIR
Sbjct: 218 STWSEAPGQ----------NIVVYEGGSVMSQARSLWRLELARTKWAGGFINWYHPMRIR 267
Query: 175 HLTTGRYLSTNENNELYLVTRDEATTASSTFCLRQEKDDQKIVLEDKDLEVIGAPIIKYG 234
HLTTGRYL NENNEL+L+ RDEATTA S FCLRQEKDDQK+VLEDKDLEVIGAPIIKYG
Sbjct: 268 HLTTGRYLGVNENNELHLIVRDEATTALSVFCLRQEKDDQKVVLEDKDLEVIGAPIIKYG 327
Query: 235 DSTVLVQHSENGLWLTYKSYETKKKGLGKVEEKQAVLHEEGKMDDGLDFSRSQEEESRTA 294
DSTVLVQHSE GLWLTYKSYETKKKG+GKVEEKQAVLHEEGKMDDGLDFSRSQEEESRTA
Sbjct: 328 DSTVLVQHSETGLWLTYKSYETKKKGVGKVEEKQAVLHEEGKMDDGLDFSRSQEEESRTA 387
Query: 295 RVIRKCSSLFTQFISGLEALQVNRRHSLFCASVNLNEMVMCLEDLINYFAQPEEDMEHEE 354
RVIRKCSSLFTQFI GLE LQVNRRHSLFCA+VNLNEMVMCLEDLINYFAQP +DMEHEE
Sbjct: 388 RVIRKCSSLFTQFIRGLEELQVNRRHSLFCATVNLNEMVMCLEDLINYFAQPADDMEHEE 447
Query: 355 KQNRLRALRNRQDLFQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQSWDIISGYLY 414
KQNR RALRNRQDLFQEEGILNLILEAIDKINVITSQGFLV+LAGDESGQSWDIISGYLY
Sbjct: 448 KQNRFRALRNRQDLFQEEGILNLILEAIDKINVITSQGFLVSLAGDESGQSWDIISGYLY 507
Query: 415 QLLAAIIKGNHTNCAQFANTNRLNWLFSRLGSQASSEGTGMLDVLHCVLIDSPEALNMMR 474
QLLAAIIKGNHTNCAQFAN+NRLNWLFSRLGSQASSEGTGM
Sbjct: 508 QLLAAIIKGNHTNCAQFANSNRLNWLFSRLGSQASSEGTGM------------------- 548
Query: 475 DEHIKVIISLLEKHGRDPKVLDVLCSLCVGNGVAVRSSQNNICDYLLPGKNLLLQTQLDE 534
LDVL + + + A L DE
Sbjct: 549 --------------------LDVLHCVLIDSPEA-------------------LNMMRDE 569
Query: 535 HIKVIISLLEKHGRDPKVLDVLCSLCVGNGVAVRSSQNNICDYLLPGKNLLLQTQLVDHV 594
HIKVIISLLEKHGRD KVLDVLCSLCVGNGVAVRSSQNNICD+LLPGKNLLLQTQLVDHV
Sbjct: 570 HIKVIISLLEKHGRDSKVLDVLCSLCVGNGVAVRSSQNNICDFLLPGKNLLLQTQLVDHV 629
Query: 595 AS-----------------------------------------------YVPYPGGGEKW 607
AS YVPYPGGGEKW
Sbjct: 630 ASVRPNIFVGRVVGSAVYQKWYFEVTMDHIEQTTHMTPHLRIGWANTSGYVPYPGGGEKW 689
Query: 608 GGNGVGDDLYSFGFDGAHLWTGGRRTEVIPGTLEPYIKKGDVIGVALDLSIPIITFTFNG 667
GGNGVGDDLYS+GFDGA+LWTGGR+T V+P EP+I+KGDVIGV+LDL++PIITF+FNG
Sbjct: 690 GGNGVGDDLYSYGFDGANLWTGGRKTCVLPHATEPFIRKGDVIGVSLDLTVPIITFSFNG 749
Query: 668 SLVSGAFRDFNLDGMFFPVISCSSKLSCRFLFGGDHGRLKYIPPEEFSPLVESLLPHQVL 727
S + G FRDFN DGMFFPV+SCSSKLSCRFL GGDHGRLKY PPEEFSPLVESLLP QVL
Sbjct: 750 SPIRGCFRDFNYDGMFFPVLSCSSKLSCRFLLGGDHGRLKYFPPEEFSPLVESLLPQQVL 809
Query: 728 SIDPCFYFGNLPKVVLAGPWHVEDDTAFVPTPVDTSMITLPHYVENIRDKLAENIHEMWA 787
SIDPCFYFGNL K VLAGPW VEDDTAFVPTPVDT+ +TLP+Y+E+IRDKLAENIHEMWA
Sbjct: 810 SIDPCFYFGNLNKCVLAGPWPVEDDTAFVPTPVDTTKVTLPNYIESIRDKLAENIHEMWA 869
Query: 788 MNKIEAGWMYGERRDDVRKIHPCLIQFERRIWRLCSRISRLCSRIRSETSILFYHPPRVK 847
MNKIEAGW++GE+RDD+RK+HPCLIQF+ +L R S++ +T
Sbjct: 870 MNKIEAGWIFGEKRDDIRKVHPCLIQFD----QLPPAEKRYDSQLAVQT----------- 914
Query: 848 FHAKVLPTILAIGYHISMDKPPSRIKTVRLPNEPFMQPNGYKPAPLDLSAIALTPKMEEL 907
L TILA+GY+I+MDKPPSRIKT+RLPNE FMQ NGYKPAPLDL+AI+LTPKMEEL
Sbjct: 915 -----LKTILALGYYITMDKPPSRIKTIRLPNESFMQSNGYKPAPLDLTAISLTPKMEEL 969
Query: 908 VDQLAENTHNLWAKERIQQGWTYGLNEDPDMARSPHLVPYGKVDDAIKKANRDTASETVR 967
VDQLAENTHNLWAKERIQQGWTYGLNED DM RSPHLVPY KVD+AIKKANRDTASETVR
Sbjct: 970 VDQLAENTHNLWAKERIQQGWTYGLNEDSDMLRSPHLVPYCKVDEAIKKANRDTASETVR 1029
Query: 968 TLLVYGYNLDPPTGEQQDALLAEQNRIRFMSFRTYRAEKNYAVSSGKWYFEFEILTAGPM 1027
TLLVYGYNLDPPTGE +ALLAE +R R + FRTYRAEKNYAVS+GKWYFEFEILTAGPM
Sbjct: 1030 TLLVYGYNLDPPTGEAHEALLAEASRQRQLLFRTYRAEKNYAVSTGKWYFEFEILTAGPM 1089
Query: 1028 RVGWARVDCAPGAQLGSDENSWAFDGFNRHIKINL-----FQQ------------DKKDY 1070
RVGWAR DC PG+QLG+DE SWAFDGFN K+ L F + D D+
Sbjct: 1090 RVGWARSDCPPGSQLGNDEYSWAFDGFNEE-KVYLGTGESFGRQWQVGDVVGVFLDLLDH 1148
Query: 1071 SISGFSLNGELLMDALGGETTFADVQGEGFVPACTLGVGQRAKLTFGQDVNQLKYFSMCG 1130
+IS FSLNGELLMDALGGET+FADVQGE FVPA TLG+GQ+AKLTFGQDV LK+F+ CG
Sbjct: 1149 TIS-FSLNGELLMDALGGETSFADVQGESFVPAFTLGIGQKAKLTFGQDVTVLKFFTTCG 1207
Query: 1131 LQEGYEPFCVNMKRAVTYWYTRDQPIFENTDDYP-SVIDVTRIPAGSDTPPCLKISHNTF 1189
LQEGYEPFCVNM RAVTYWYT+D PIFENT+DY S IDVTRIPAGSDTPPCLKISHN F
Sbjct: 1208 LQEGYEPFCVNMNRAVTYWYTKDHPIFENTEDYADSRIDVTRIPAGSDTPPCLKISHNLF 1267
Query: 1190 ETMEKANWEFLRLSLPVTCMSTFIDENEKQRRWKEIRNRQQILMMEAVDNTTPAHIEQIM 1249
E+MEKANWEFLRLSLPV C STFI+E+EK +RW+EIR RQ L++EA D TTPAHIEQIM
Sbjct: 1268 ESMEKANWEFLRLSLPVICYSTFIEESEKLKRWQEIRIRQHRLLVEA-DQTTPAHIEQIM 1326
Query: 1250 KSGFSMSDIKGKSASLPASVDQLRRYIEIKQSDLPSAVAAKKTREFRCPPREQPWRCFYC 1309
KSGFSMSDIKG +E + +P R+ R P R
Sbjct: 1327 KSGFSMSDIKGLHRGYSEDA------VEADEMMMPPQSTPTTKRKMRQPSRPPRKGSLSR 1380
Query: 1310 NLFVEATSKEILQIELGRTSTTLPLS--AAVLQNSE 1343
N + + + Q ++ R+++ L L+ A LQN +
Sbjct: 1381 NEDMPMINGSLEQSKMNRSTSELDLNRYNADLQNDK 1416
|
Source: Laodelphax striatella Species: Laodelphax striatella Genus: Laodelphax Family: Delphacidae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|389568467|gb|AFK84957.1| ryanodine receptor [Bemisia tabaci] | Back alignment and taxonomy information |
|---|
| >gi|328717378|ref|XP_003246190.1| PREDICTED: ryanodine receptor 44F-like isoform 1 [Acyrthosiphon pisum] gi|328717380|ref|XP_003246191.1| PREDICTED: ryanodine receptor 44F-like isoform 2 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
| >gi|270003382|gb|EEZ99829.1| hypothetical protein TcasGA2_TC002610 [Tribolium castaneum] | Back alignment and taxonomy information |
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| >gi|383851977|ref|XP_003701507.1| PREDICTED: ryanodine receptor 44F-like [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|350396439|ref|XP_003484552.1| PREDICTED: ryanodine receptor 44F-like [Bombus impatiens] | Back alignment and taxonomy information |
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| >gi|340710638|ref|XP_003393894.1| PREDICTED: ryanodine receptor 44F-like [Bombus terrestris] | Back alignment and taxonomy information |
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| >gi|380026505|ref|XP_003696991.1| PREDICTED: LOW QUALITY PROTEIN: ryanodine receptor 44F-like [Apis florea] | Back alignment and taxonomy information |
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| >gi|328789627|ref|XP_392217.4| PREDICTED: ryanodine receptor 44F [Apis mellifera] | Back alignment and taxonomy information |
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| >gi|307197748|gb|EFN78897.1| Ryanodine receptor 44F [Harpegnathos saltator] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1568 | ||||||
| FB|FBgn0011286 | 5127 | Rya-r44F "Ryanodine receptor 4 | 0.507 | 0.155 | 0.737 | 0.0 | |
| UNIPROTKB|F1NLZ9 | 4955 | RYR2 "Uncharacterized protein" | 0.5 | 0.158 | 0.475 | 0.0 | |
| UNIPROTKB|F1PJL2 | 4813 | RYR3 "Uncharacterized protein" | 0.499 | 0.162 | 0.456 | 0.0 | |
| UNIPROTKB|Q15413 | 4870 | RYR3 "Ryanodine receptor 3" [H | 0.499 | 0.160 | 0.454 | 0.0 | |
| UNIPROTKB|G3N0E5 | 4469 | RYR3 "Uncharacterized protein" | 0.503 | 0.176 | 0.452 | 0.0 | |
| WB|WBGene00006801 | 5387 | unc-68 [Caenorhabditis elegans | 0.335 | 0.097 | 0.531 | 0.0 | |
| UNIPROTKB|F1PIS0 | 5058 | RYR1 "Uncharacterized protein" | 0.332 | 0.103 | 0.510 | 2.29999998712e-316 | |
| UNIPROTKB|F1NCJ4 | 4861 | RYR3 "Uncharacterized protein" | 0.501 | 0.161 | 0.451 | 4.70000000225e-315 | |
| ZFIN|ZDB-GENE-020108-2 | 5056 | ryr1a "ryanodine receptor 1a ( | 0.501 | 0.155 | 0.452 | 2.6e-314 | |
| UNIPROTKB|F1NYM2 | 4856 | RYR3 "Uncharacterized protein" | 0.496 | 0.160 | 0.453 | 5.4000000002e-314 |
| FB|FBgn0011286 Rya-r44F "Ryanodine receptor 44F" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 3117 (1102.3 bits), Expect = 0., Sum P(4) = 0.
Identities = 608/824 (73%), Positives = 684/824 (83%)
Query: 1 YLACLSTSSSNDKLSFDVGLQEHSQGEACWWTVHPASKQRSEGEKVRVGDDLILVSVATE 60
YLACLSTSSSNDKLSFDVGLQEHSQGEACWWTVHPASKQRSEGEKVRVGDDLILVSVATE
Sbjct: 113 YLACLSTSSSNDKLSFDVGLQEHSQGEACWWTVHPASKQRSEGEKVRVGDDLILVSVATE 172
Query: 61 RYLHTTKENDLSVVNASFHVTHWSVQPYGTGISRMKYVMCLEVMSCGSSTEVTNVSLYLH 120
RYLHTTKEN+ S+VNASFHVTHWSVQPYGTGISRMKYV + G +V + H
Sbjct: 173 RYLHTTKENEQSIVNASFHVTHWSVQPYGTGISRMKYVGYV----FGG-----DVLRFFH 223
Query: 121 PGLIC---PDR--SKYLFHIVVYEGGSVMSQARSLWRLELARTKWAGGFINWYHPMRIRH 175
G C P + +IV+YEGG VM+QARSLWRLELARTKW GGFINWYHPMRIRH
Sbjct: 224 GGDECLTIPSTWGREAGQNIVIYEGGVVMAQARSLWRLELARTKWTGGFINWYHPMRIRH 283
Query: 176 LTTGRYLSTNENNELYLVTRDEATTASSTFCLRQEKDDQKIVLEDKDLEVIGAPIIKYGD 235
+TTGRYL N++NEL LV ++EA+ A++TFCLRQEKDD+K VLEDKDLEVIG+PIIKYGD
Sbjct: 284 ITTGRYLGVNDSNELILVKKEEASIATTTFCLRQEKDDEKKVLEDKDLEVIGSPIIKYGD 343
Query: 236 STVLVQHSENGLWLTYKSYETKKKGLGKVEEKQAVLHEEGKMDDGLDFSRSQEEESRTAR 295
+TV+VQH E LWL+YKSYETKKKG+GKVEEKQA+LHEEGKMDD LDFSRSQEEES+TAR
Sbjct: 344 TTVIVQHCETSLWLSYKSYETKKKGVGKVEEKQAILHEEGKMDDCLDFSRSQEEESKTAR 403
Query: 296 VIRKCSSLFTQFISGLEALQVNRRHSLFCASVNLNEMVMCLEDLINYFAQPEEDMEHEEK 355
VIRKCSSLFTQFI+ LE LQ NRRHS+F VNLNEMVMCLEDLINYF+QPE+DMEHEEK
Sbjct: 404 VIRKCSSLFTQFITALETLQSNRRHSIFFQKVNLNEMVMCLEDLINYFSQPEDDMEHEEK 463
Query: 356 QNRLRALRNRQDLFQEEGILNLILEAIDKINVITSQGFLVN-LAGDESGQSWDIISGYLY 414
QNR RALRNRQDLFQEEG+LNLILEAIDKIN+ITSQGFL + LAGDE+GQSWD+IS YLY
Sbjct: 464 QNRFRALRNRQDLFQEEGVLNLILEAIDKINIITSQGFLASFLAGDETGQSWDLISTYLY 523
Query: 415 QLLAAIIKGNHTNCAQFANTNRLNWLFSRLGSQASSEGTGMLDVLHCVLIDSPEALNMMR 474
QLLAAIIKGNHTNCAQFAN+NRLNWLFSRLGSQASSEG+GMLDVLHCVLIDSPEALNMMR
Sbjct: 524 QLLAAIIKGNHTNCAQFANSNRLNWLFSRLGSQASSEGSGMLDVLHCVLIDSPEALNMMR 583
Query: 475 DEHIKVIISLLEKHGRDPKVLDVLCSLCVGNGVAVRSSQNNICDYLLPGKNLLLQTQLDE 534
DEHIKVIISLLEKHGRDPKVLDVLCSLCVGNGVAVRSSQNNICD+LLPGKNLLLQT L +
Sbjct: 584 DEHIKVIISLLEKHGRDPKVLDVLCSLCVGNGVAVRSSQNNICDFLLPGKNLLLQTLLVD 643
Query: 535 HIKVIISLLEKHGRDPKVLDVLCSLCVGNGVAVRSSQNNICDYLLPGKNLLLQTQLV-DH 593
H+ I P ++ G+ + + D++ +++ ++ +
Sbjct: 644 HVASI---------RP---NIFVGRVDGSSMYQKWYFEVTMDHIEQTTHMMPHLRIGWAN 691
Query: 594 VASYVPYPXXXXXXXXXXXXDDLYSFGFDGAHLWTGGRRTEVIPGTLE-PYIKKGDVIGV 652
+ YVPYP DDLYSFGFDGA LWTGGR+T V+ E P+I+KGDVIGV
Sbjct: 692 TSGYVPYPGGGKKWGGNGVGDDLYSFGFDGAFLWTGGRKTLVVDALPEEPFIRKGDVIGV 751
Query: 653 ALDLSIPIITFTFNGSLVSGAFRDFNLDGMFFPVISCSSKLSCRFLFGGDHGRLKYIPPE 712
A+DLS+PIITFTFNG V G+FRDFNLDGMFFPV+SCSSKLSCRFLFGGDHGRLK+ PP
Sbjct: 752 AIDLSVPIITFTFNGVKVRGSFRDFNLDGMFFPVMSCSSKLSCRFLFGGDHGRLKFAPPM 811
Query: 713 EFSPLVESLLPHQVLSIDPCFYFGNLPKVVLAGPWHVEDDTAFVPTPVDTSMITLPHYVE 772
FS LV+ L+P Q+LS+DPCFYFGNL K VLAGPW +EDDTAFVP PVDT+ +TLP V+
Sbjct: 812 GFSALVQCLMPQQILSLDPCFYFGNLAKNVLAGPWLIEDDTAFVPKPVDTTGVTLPSSVD 871
Query: 773 NIRDKLAENIHEMWAMNKIEAGWMYGERRDDVRKIHPCLIQFER 816
I++KLAENIHEMWA+NKIEAGW +GE RDD +IHPCL FE+
Sbjct: 872 QIKEKLAENIHEMWALNKIEAGWSWGEHRDDYHRIHPCLTHFEK 915
|
|
| UNIPROTKB|F1NLZ9 RYR2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PJL2 RYR3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q15413 RYR3 "Ryanodine receptor 3" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G3N0E5 RYR3 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| WB|WBGene00006801 unc-68 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PIS0 RYR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NCJ4 RYR3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-020108-2 ryr1a "ryanodine receptor 1a (skeletal)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NYM2 RYR3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q24498 | RY44_DROME | No assigned EC number | 0.6782 | 0.7538 | 0.2305 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1568 | |||
| pfam01365 | 203 | pfam01365, RYDR_ITPR, RIH domain | 8e-76 | |
| cd12877 | 151 | cd12877, SPRY1_RyR, SPRY domain 1 (SPRY1) of ryano | 2e-57 | |
| cd12878 | 133 | cd12878, SPRY2_RyR, SPRY domain 2 (SPRY2) of ryano | 2e-54 | |
| pfam02815 | 189 | pfam02815, MIR, MIR domain | 2e-39 | |
| pfam02026 | 95 | pfam02026, RyR, RyR domain | 1e-38 | |
| pfam08709 | 210 | pfam08709, Ins145_P3_rec, Inositol 1,4,5-trisphosp | 2e-35 | |
| pfam02026 | 95 | pfam02026, RyR, RyR domain | 2e-27 | |
| pfam00622 | 125 | pfam00622, SPRY, SPRY domain | 1e-19 | |
| smart00449 | 122 | smart00449, SPRY, Domain in SPla and the RYanodine | 1e-17 | |
| smart00449 | 122 | smart00449, SPRY, Domain in SPla and the RYanodine | 5e-17 | |
| pfam00622 | 125 | pfam00622, SPRY, SPRY domain | 3e-15 | |
| cd11709 | 118 | cd11709, SPRY, SPRY domain | 3e-13 | |
| cd11709 | 118 | cd11709, SPRY, SPRY domain | 1e-12 | |
| cd12883 | 121 | cd12883, SPRY_RING, SPRY domain at N-terminus of R | 6e-11 | |
| cd12882 | 128 | cd12882, SPRY_RNF123, SPRY domain at N-terminus of | 1e-09 | |
| cd12883 | 121 | cd12883, SPRY_RING, SPRY domain at N-terminus of R | 2e-08 | |
| cd12872 | 149 | cd12872, SPRY_Ash2, SPRY domain in Ash2 | 4e-08 | |
| cd12882 | 128 | cd12882, SPRY_RNF123, SPRY domain at N-terminus of | 6e-08 | |
| cd12872 | 149 | cd12872, SPRY_Ash2, SPRY domain in Ash2 | 7e-08 | |
| cd12885 | 132 | cd12885, SPRY_RanBP_like, SPRY domain in Ran bindi | 1e-06 | |
| cd12878 | 133 | cd12878, SPRY2_RyR, SPRY domain 2 (SPRY2) of ryano | 4e-06 | |
| cd12873 | 155 | cd12873, SPRY_DDX1, SPRY domain associated with DE | 4e-05 | |
| cd12873 | 155 | cd12873, SPRY_DDX1, SPRY domain associated with DE | 5e-05 | |
| smart00472 | 57 | smart00472, MIR, Domain in ryanodine and inositol | 5e-05 | |
| cd12884 | 176 | cd12884, SPRY_hnRNP, SPRY domain in heterogeneous | 2e-04 | |
| smart00472 | 57 | smart00472, MIR, Domain in ryanodine and inositol | 8e-04 | |
| cd12884 | 176 | cd12884, SPRY_hnRNP, SPRY domain in heterogeneous | 0.002 |
| >gnl|CDD|216456 pfam01365, RYDR_ITPR, RIH domain | Back alignment and domain information |
|---|
Score = 249 bits (638), Expect = 8e-76
Identities = 87/206 (42%), Positives = 116/206 (56%), Gaps = 8/206 (3%)
Query: 331 EMVMCLEDLINYFAQPEEDMEHEEKQNRLRALRNRQDLFQEEGILNLILEAIDKINVITS 390
E++ LEDLI + AQPEE+ +HE KQN L+ LR RQ L +EEG+ ++LE + +
Sbjct: 1 EVLKLLEDLIKFCAQPEEEGQHELKQNNLKPLRQRQRLLREEGVHKVVLELLQNPYDEKA 60
Query: 391 QGFLVNLAGDESGQSWDIISGYLYQLLAAIIKGNHTNCAQFANTNRLNWLFSRLGSQASS 450
G GDE + I Y+ L +GN N A A L L S
Sbjct: 61 GGDFAEELGDEKDEKMKEIVRLCYRFLQYFCRGNRQNQALLAKHLDLMQLQ-------SG 113
Query: 451 EGTGMLDVLHCVLIDSPEALNMMRDEHIKVIISLLEKHGRDPKVLDVLCSLCVGNGVAVR 510
G LD L+ VL ++PE LN + + I+ +SLLEKHGRDPK LDVL +LCV NG AVR
Sbjct: 114 PGILELDTLYAVLHNNPELLNEIIEAVIEHFVSLLEKHGRDPKYLDVLKTLCVANGKAVR 173
Query: 511 SSQNNIC-DYLLPGKNLLLQTQLDEH 535
+Q+ IC + L PG++LL+QT L
Sbjct: 174 GTQDLICKEVLNPGEDLLIQTNLRAS 199
|
The RIH (RyR and IP3R Homology) domain is an extracellular domain from two types of calcium channels. This region is found in the ryanodine receptor and the inositol-1,4,5- trisphosphate receptor. This domain may form a binding site for IP3. Length = 203 |
| >gnl|CDD|240457 cd12877, SPRY1_RyR, SPRY domain 1 (SPRY1) of ryanodine receptor (RyR) | Back alignment and domain information |
|---|
| >gnl|CDD|240458 cd12878, SPRY2_RyR, SPRY domain 2 (SPRY2) of ryanodine receptor (RyR) | Back alignment and domain information |
|---|
| >gnl|CDD|217239 pfam02815, MIR, MIR domain | Back alignment and domain information |
|---|
| >gnl|CDD|202095 pfam02026, RyR, RyR domain | Back alignment and domain information |
|---|
| >gnl|CDD|219984 pfam08709, Ins145_P3_rec, Inositol 1,4,5-trisphosphate/ryanodine receptor | Back alignment and domain information |
|---|
| >gnl|CDD|202095 pfam02026, RyR, RyR domain | Back alignment and domain information |
|---|
| >gnl|CDD|216029 pfam00622, SPRY, SPRY domain | Back alignment and domain information |
|---|
| >gnl|CDD|214669 smart00449, SPRY, Domain in SPla and the RYanodine Receptor | Back alignment and domain information |
|---|
| >gnl|CDD|214669 smart00449, SPRY, Domain in SPla and the RYanodine Receptor | Back alignment and domain information |
|---|
| >gnl|CDD|216029 pfam00622, SPRY, SPRY domain | Back alignment and domain information |
|---|
| >gnl|CDD|240451 cd11709, SPRY, SPRY domain | Back alignment and domain information |
|---|
| >gnl|CDD|240451 cd11709, SPRY, SPRY domain | Back alignment and domain information |
|---|
| >gnl|CDD|240463 cd12883, SPRY_RING, SPRY domain at N-terminus of Really Interesting New Gene (RING) finger domain | Back alignment and domain information |
|---|
| >gnl|CDD|240462 cd12882, SPRY_RNF123, SPRY domain at N-terminus of ring finger protein 123 | Back alignment and domain information |
|---|
| >gnl|CDD|240463 cd12883, SPRY_RING, SPRY domain at N-terminus of Really Interesting New Gene (RING) finger domain | Back alignment and domain information |
|---|
| >gnl|CDD|240452 cd12872, SPRY_Ash2, SPRY domain in Ash2 | Back alignment and domain information |
|---|
| >gnl|CDD|240462 cd12882, SPRY_RNF123, SPRY domain at N-terminus of ring finger protein 123 | Back alignment and domain information |
|---|
| >gnl|CDD|240452 cd12872, SPRY_Ash2, SPRY domain in Ash2 | Back alignment and domain information |
|---|
| >gnl|CDD|240465 cd12885, SPRY_RanBP_like, SPRY domain in Ran binding proteins, SSH4, HECT E3 and SPRYD3 | Back alignment and domain information |
|---|
| >gnl|CDD|240458 cd12878, SPRY2_RyR, SPRY domain 2 (SPRY2) of ryanodine receptor (RyR) | Back alignment and domain information |
|---|
| >gnl|CDD|240453 cd12873, SPRY_DDX1, SPRY domain associated with DEAD box gene DDX1 | Back alignment and domain information |
|---|
| >gnl|CDD|240453 cd12873, SPRY_DDX1, SPRY domain associated with DEAD box gene DDX1 | Back alignment and domain information |
|---|
| >gnl|CDD|197746 smart00472, MIR, Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases | Back alignment and domain information |
|---|
| >gnl|CDD|240464 cd12884, SPRY_hnRNP, SPRY domain in heterogeneous nuclear ribonucleoprotein U-like (hnRNP) protein 1 | Back alignment and domain information |
|---|
| >gnl|CDD|197746 smart00472, MIR, Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases | Back alignment and domain information |
|---|
| >gnl|CDD|240464 cd12884, SPRY_hnRNP, SPRY domain in heterogeneous nuclear ribonucleoprotein U-like (hnRNP) protein 1 | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1568 | |||
| KOG2243|consensus | 5019 | 100.0 | ||
| KOG3533|consensus | 2706 | 100.0 | ||
| KOG2243|consensus | 5019 | 100.0 | ||
| PF01365 | 207 | RYDR_ITPR: RIH domain; InterPro: IPR000699 Ryanodi | 99.97 | |
| PF02026 | 94 | RyR: RyR domain; InterPro: IPR003032 This domain i | 99.96 | |
| PF02026 | 94 | RyR: RyR domain; InterPro: IPR003032 This domain i | 99.89 | |
| PF08709 | 214 | Ins145_P3_rec: Inositol 1,4,5-trisphosphate/ryanod | 99.82 | |
| KOG2626|consensus | 544 | 99.8 | ||
| PF02815 | 190 | MIR: MIR domain; InterPro: IPR003608 The MIR domai | 99.79 | |
| KOG0349|consensus | 725 | 99.73 | ||
| KOG0349|consensus | 725 | 99.69 | ||
| PF00622 | 124 | SPRY: SPRY domain; InterPro: IPR003877 The SPRY do | 99.62 | |
| smart00449 | 122 | SPRY Domain in SPla and the RYanodine Receptor. Do | 99.59 | |
| PF00622 | 124 | SPRY: SPRY domain; InterPro: IPR003877 The SPRY do | 99.16 | |
| smart00449 | 122 | SPRY Domain in SPla and the RYanodine Receptor. Do | 99.08 | |
| KOG3533|consensus | 2706 | 98.53 | ||
| KOG4030|consensus | 197 | 98.5 | ||
| KOG2626|consensus | 544 | 98.27 | ||
| PF01365 | 207 | RYDR_ITPR: RIH domain; InterPro: IPR000699 Ryanodi | 98.01 | |
| KOG4367|consensus | 699 | 97.88 | ||
| KOG1477|consensus | 469 | 97.4 | ||
| KOG3359|consensus | 723 | 97.25 | ||
| KOG2242|consensus | 558 | 97.25 | ||
| KOG3953|consensus | 242 | 96.98 | ||
| KOG4367|consensus | 699 | 96.66 | ||
| KOG3358|consensus | 211 | 96.49 | ||
| KOG3358|consensus | 211 | 96.43 | ||
| KOG3953|consensus | 242 | 96.3 | ||
| KOG4030|consensus | 197 | 96.18 | ||
| PF02815 | 190 | MIR: MIR domain; InterPro: IPR003608 The MIR domai | 96.11 | |
| PF08709 | 214 | Ins145_P3_rec: Inositol 1,4,5-trisphosphate/ryanod | 95.58 | |
| smart00472 | 57 | MIR Domain in ryanodine and inositol trisphosphate | 95.57 | |
| COG1928 | 699 | PMT1 Dolichyl-phosphate-mannose--protein O-mannosy | 95.22 | |
| smart00472 | 57 | MIR Domain in ryanodine and inositol trisphosphate | 94.56 | |
| KOG1477|consensus | 469 | 93.37 | ||
| KOG2242|consensus | 558 | 92.38 | ||
| KOG3359|consensus | 723 | 88.68 | ||
| COG1928 | 699 | PMT1 Dolichyl-phosphate-mannose--protein O-mannosy | 88.48 |
| >KOG2243|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=3598.02 Aligned_cols=1497 Identities=45% Similarity=0.836 Sum_probs=0.0
Q ss_pred CccccCcC-cccccccceEEEeeCCCCceeEEEEEcccccccCCCceecCCEEEEEEccCCCcccccCCCCceEEEeeec
Q psy13309 1 YLACLSTS-SSNDKLSFDVGLQEHSQGEACWWTVHPASKQRSEGEKVRVGDDLILVSVATERYLHTTKENDLSVVNASFH 79 (1568)
Q Consensus 1 YL~cl~~s-S~~eK~af~V~L~e~~~~E~cwF~I~P~~K~RseGe~VrvgD~ViLvsv~s~~yLH~S~~~~~~EVnaS~~ 79 (1568)
||+|++|| |.+||+||+|+|+|+.++|+|||+|||++||||||||||+||++||+||+++||||+|..+|...|+|+|+
T Consensus 130 yl~clstsrs~tdklafdvgl~e~~tgeacwwtihpaskqrsegekvrigddlilvsvsserylhls~~ng~i~vdaaf~ 209 (5019)
T KOG2243|consen 130 YLCCLSTSRSQTDKLAFDVGLQEDATGEACWWTIHPASKQRSEGEKVRIGDDLILVSVSSERYLHLSVGNGNIHVDAAFM 209 (5019)
T ss_pred EEEEecccccccccceeeccccccCcCceeeEEecccccccccCceeeecCceEEEEecccceEEEEecCCceeecHHHH
Q ss_pred eeeEEEEEeecccccccccccccccccCCCCCCCcEEEEccCC------CCccCccccceeEEEEecCccccCCcceEEE
Q psy13309 80 VTHWSVQPYGTGISRMKYVMCLEVMSCGSSTEVTNVSLYLHPG------LICPDRSKYLFHIVVYEGGSVMSQARSLWRL 153 (1568)
Q Consensus 80 ~T~WkI~lf~s~~~~~~~~~~~~~yLkG~~lr~GDVVRLfH~E------~~~~~~~~~~~~v~~~e~g~~~tsa~sLWeI 153 (1568)
||.|+|.|.|||++.+ +|||.| |||+||||++ .++.+..+.+++-++||.|.+.++|+||||+
T Consensus 210 qtlw~v~p~~sgs~~~------egylig-----g~v~rl~hghmdecltips~d~~d~q~r~i~ye~g~~~~~a~slwr~ 278 (5019)
T KOG2243|consen 210 QTLWNVAPICSGSEAA------EGYLIG-----GDVLRLFHGHMDECLTIPSGDHGDEQHRRIFYEAGAAGTHARSLWRL 278 (5019)
T ss_pred HHHhccCCCcCCchhh------hceeec-----chHHHHhccCccceeecCCCCccchhheeeeeeccccccchhhhhcc
Q ss_pred eecccccCCccceecCceEEEEcCCCceeeeeecCccccccccccCCCCcceEeecc---ccccccccccccccccCCcc
Q psy13309 154 ELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNELYLVTRDEATTASSTFCLRQE---KDDQKIVLEDKDLEVIGAPI 230 (1568)
Q Consensus 154 E~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~l~~~~~a~~~~T~F~f~~~---ke~~~~v~~~~di~~m~~~~ 230 (1568)
|++++.|+|++++|||+|||||+|||+||++.+|+++.++++.+++.++|+|.||.+ |++.+.. .++|+++||.++
T Consensus 279 e~lriawsgs~irwgq~frlrh~ttg~ylal~edk~lil~dk~kad~kstafsfraskelkekld~~-~kkdidgmg~~e 357 (5019)
T KOG2243|consen 279 EPLRIAWSGSHIRWGQAFRLRHLTTGHYLALMEDKGLILMDKAKADTKSTAFSFRASKELKEKLDSG-HKKDIDGMGTPE 357 (5019)
T ss_pred cceeEEeccCccccCcceeeeeccccceeeeeccCCceeechhhcccccceeEeeccHHHHHhhccc-cccccccCCCcc
Q ss_pred eeeCCcEEEEEEcccCeeeEeeecccccccCChhhhhceEeccccccccccceeccchHHHHHHHHHHHHHHHHHHHHHH
Q psy13309 231 IKYGDSTVLVQHSENGLWLTYKSYETKKKGLGKVEEKQAVLHEEGKMDDGLDFSRSQEEESRTARVIRKCSSLFTQFISG 310 (1568)
Q Consensus 231 I~~gdSyvrIqH~~Tg~WL~~~~~~~~~~~~~~~e~~k~il~~~g~~dD~f~~~~v~~eEvrd~~~i~s~~~~l~~Fi~~ 310 (1568)
|+||||.|+|||++||+||+|++.+.+..++|+- .|++|+|.+|||||+.+++|++.+|++.+++|+++..+|++|+++
T Consensus 358 ikygdsvc~iqhi~sglw~tyka~d~ks~rlg~i-krk~ilh~eghmddgisl~r~q~ees~~ariir~t~~lf~~fi~g 436 (5019)
T KOG2243|consen 358 IKYGDSVCFIQHIASGLWLTYKAQDAKSSRLGPI-KRKAILHHEGHMDDGISLQRCQHEESQAARIIRNTTALFNQFIRG 436 (5019)
T ss_pred eecCceeeeeeeeccceeEEEeecccchhcccch-hhhhhhhccccccCccchhhhhhHHHHHHHHHHHHHHHHHHHHhh
Q ss_pred hhhhhcccccccccccccHHHHHHHHHHHHhHccCCCcchhhHHHhhhhccchhhhhhhhhhhhHHHHHHHHhhcccccC
Q psy13309 311 LEALQVNRRHSLFCASVNLNEMVMCLEDLINYFAQPEEDMEHEEKQNRLRALRNRQDLFQEEGILNLILEAIDKINVITS 390 (1568)
Q Consensus 311 L~~~~~~~~~~~~~~~~~l~~v~~~L~dLI~F~~~~~~~~~he~kq~~l~p~r~RQkLlREqgvI~lll~iLd~l~~~~~ 390 (1568)
|+.+++..+.+...-.++|++|.+.|+|||.||.+|+++++||+||++++.++||||||+|+|||.+|++|||+++.|++
T Consensus 437 ldals~~~kas~~~itlpie~v~~slqdli~yf~ppde~l~hedkqnklralknrqnlfkeegmi~lvl~cidrl~iy~s 516 (5019)
T KOG2243|consen 437 LDALSGKAKASAADITLPIEEVLLSLQDLIAYFHPPDEELEHEDKQNKLRALKNRQNLFKEEGMIALVLECIDRLHIYNS 516 (5019)
T ss_pred hhhhccccccccCCccccHHHHHHHHHHHHhhcCCchHHhhhhhhHhHHHHHhhHHhHhhhhhHHHHHHHHHHHHhhhhh
Q ss_pred ccccccccCCcccchHHHHHHHHHHHHHHHHhhccchhhhhhhhhhHHHHHHHhcccccccCCCHHHHHHHHHhCCHHHH
Q psy13309 391 QGFLVNLAGDESGQSWDIISGYLYQLLAAIIKGNHTNCAQFANTNRLNWLFSRLGSQASSEGTGMLDVLHCVLIDSPEAL 470 (1568)
Q Consensus 391 ~~~~~~l~~ee~~~~~~~I~~~iY~LL~~lirgN~~N~~~fa~~~~Ld~L~s~l~~~q~~iG~gildvL~~lL~nN~elL 470 (1568)
++||+.++++|++++|++|.+++|+||+++||||+.||++|+++ ||||+++++++++++| |+++|+|||.++||+|
T Consensus 517 ~ahfa~ia~~eag~awk~iln~ly~llaalirgnr~ncaqfs~~--ldwliskldrleassg--ilevlhcil~espeal 592 (5019)
T KOG2243|consen 517 AAHFADIAGEEAGEAWKEILNLLYELLAALIRGNRKNCAQFSGN--LDWLISKLDRLEASSG--ILEVLHCILTESPEAL 592 (5019)
T ss_pred HHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcchhhHHHhcCc--HhHHHHHHHHhhhccc--hHhHhhhhhcCCHHHH
Q ss_pred hhccHHHHHHHHHHHHHcCCCchhhhhhccccccCCcccccchHHHHhhhcCCCCcceeeecccceehhhhhhhhhCCCC
Q psy13309 471 NMMRDEHIKVIISLLEKHGRDPKVLDVLCSLCVGNGVAVRSSQNNICDYLLPGKNLLLQTQLDEHIKVIISLLEKHGRDP 550 (1568)
Q Consensus 471 n~I~e~hI~~fIsLL~k~~r~~k~Ld~LssLCvcnG~AI~~NQelIc~~LL~~~~lll~T~~v~hi~s~i~~lek~gr~p 550 (1568)
|.|.|.||+++|+||+|||||+|+||+|||||+|+|+||+.||++||++|||+||||+|||++|||+|| +|
T Consensus 593 nii~eghiksiislldkhgrnhkvldilcslc~c~gvavranq~licdnllp~r~lllqtrlin~vss~---------rp 663 (5019)
T KOG2243|consen 593 NIIAEGHIKSIISLLDKHGRNHKVLDILCSLCLCHGVAVRANQHLICDNLLPGRDLLLQTRLINDVSSI---------RP 663 (5019)
T ss_pred hHHhhhhHHHHHHHHHhcCCcccHHHHHHHHHhhcceeeeccCceeccccCCcchhhHHHHhhhhhhhc---------CC
Q ss_pred ccceeecceeecccccccccCCceeEeecCCCccccccceecc------------------cccccccCCCCcccccccc
Q psy13309 551 KVLDVLCSLCVGNGVAVRSSQNNICDYLLPGKNLLLQTQLVDH------------------VASYVPYPGGGEKWGGNGV 612 (1568)
Q Consensus 551 ~vl~vlcslcv~~G~a~~s~q~~~~~~~lp~~~lllqT~~v~~------------------~~~~~p~~~~g~~~gg~gv 612 (1568)
||| .|||++|+|+.+|||+| ++|| .+||+|+||+|+.|||+||
T Consensus 664 nif---------lgvaegsaqykkwy~el----------~id~~dpf~tae~thlrvgwass~gyap~pggge~wggngv 724 (5019)
T KOG2243|consen 664 NIF---------LGVAEGSAQYKKWYFEL----------IIDHTDPFLTAEATHLRVGWASSEGYAPCPGGGEEWGGNGV 724 (5019)
T ss_pred cee---------EeeccchHHHHHHHHHH----------hhhcCCcceecccceeeeeeeccCCCCCCCCCcccccCCCc
Q ss_pred ccCCccccccCCccccCCccccccCCCCCCCcccCCEEEEeeeCCCCeEEEeeCCcccccccccccCCCcceeeeeccCC
Q psy13309 613 GDDLYSFGFDGAHLWTGGRRTEVIPGTLEPYIKKGDVIGVALDLSIPIITFTFNGSLVSGAFRDFNLDGMFFPVISCSSK 692 (1568)
Q Consensus 613 Gdd~~S~gfDG~~~w~~~~~~~~~~~~~~~~~~~GDviGc~lDl~~g~isF~~NG~~vg~~f~~~~~dg~~fpavS~~~~ 692 (1568)
|||+|||||||.|+|+|..++.+ .+..++.++..|||+|||||..|.|||++||+||+++|++||.||+|||++||+++
T Consensus 725 gddl~sygfdglhlwsg~i~r~v-as~nqhllrsddvisccldl~~psisfringqpvqgmfenfn~dglffpv~sfsag 803 (5019)
T KOG2243|consen 725 GDDLFSYGFDGLHLWSGCIARAV-ASPNQHLLRSDDVISCCLDLGAPSISFRINGQPVQGMFENFNIDGLFFPVMSFSAG 803 (5019)
T ss_pred cchhhhcCCCcchhhcccchhhh-cChhhhhhcccchhhhhhhcCCCceEEEECCccchhHHhcCCCcceeeeeEeeccC
Q ss_pred cceEEeecCCcCCcccCCCCCChhhhhccCCcceEEecccccccCCCccc--ccCCccccCCCCcccccccccccccchh
Q psy13309 693 LSCRFLFGGDHGRLKYIPPEEFSPLVESLLPHQVLSIDPCFYFGNLPKVV--LAGPWHVEDDTAFVPTPVDTSMITLPHY 770 (1568)
Q Consensus 693 ~~~~fnfGg~~~~fk~~Pp~g~~p~~~a~~p~~~~~~~~~~~~g~~~~~~--l~Gp~~~~~~~~f~P~PVdTs~v~Lp~~ 770 (1568)
..+||++||+||.|||+||+||+||+||++|+++++++|..+|......+ |.||+.+.+++.|+|+|||||+|.||++
T Consensus 804 ikvrfllggrhgefkflpp~gyapcyea~lpkeklk~e~~keyk~d~~~~rdllg~t~~lsqaaf~p~pvdtsqiilpph 883 (5019)
T KOG2243|consen 804 IKVRFLLGGRHGEFKFLPPPGYAPCYEALLPKEKLKLEHSKEYKQDADGIRDLLGPTQFLSQAAFIPCPVDTSQIILPPH 883 (5019)
T ss_pred eEEEEEecccccceeecCCCCCccHHHHhCcHhhhccchhHhhhhcchhhhhhccchhhhhhhccccccccccccccChH
Q ss_pred hhHHHHHHHHHHHHHHHHhHhHhcccccccccCccccCCcchhhhhhhHHHhhhhhhhhccccccccccccCCcchhhhh
Q psy13309 771 VENIRDKLAENIHEMWAMNKIEAGWMYGERRDDVRKIHPCLIQFERRIWRLCSRISRLCSRIRSETSILFYHPPRVKFHA 850 (1568)
Q Consensus 771 l~~~~eklAen~He~Wa~~ki~~GW~yG~~rdd~~k~HPcLvp~e~Lpe~l~~~~~~~~~~~~~e~~~~~Y~~~~~~~~~ 850 (1568)
||.|+|||||||||+|.|+||+.||+||..|||+++.|||||.|.+||+ +|+||+.+|+.||
T Consensus 884 lekirdklaenihelw~mnkielgw~~g~irddnkrqhpclvefsklpe----~eknynlqms~et-------------- 945 (5019)
T KOG2243|consen 884 LEKIRDKLAENIHELWGMNKIELGWQFGKIRDDNKRQHPCLVEFSKLPE----QEKNYNLQMSLET-------------- 945 (5019)
T ss_pred HHHHHHHHHHHHHHHhcccceeecceeccccCCccccCceeeecccCch----hhhccchhhhHHH--------------
Q ss_pred hhhhHHHhccceeecCCCCCc--cccccCCCCCCCCCCCCccccccCcccccChhhHHHHHHHHHHHhHHHHHHHHHcCc
Q psy13309 851 KVLPTILAIGYHISMDKPPSR--IKTVRLPNEPFMQPNGYKPAPLDLSAIALTPKMEELVDQLAENTHNLWAKERIQQGW 928 (1568)
Q Consensus 851 e~LktllalG~~i~~~~~~~~--~~~~~lp~~~~~~~~~y~P~PvD~s~v~L~~~~~~~~e~LAen~H~~Wa~~ri~~GW 928 (1568)
|||+||+||||+..++.++ +|+++||++ |+.++||+|+|+|+|.|+|.|.++.++||||||.||+||++||+|||
T Consensus 946 --lktllalgchi~~~~~~aed~~kk~klpkn-y~ls~gykpapldls~ikl~p~qe~lvdklaenahnvwakdrikqgw 1022 (5019)
T KOG2243|consen 946 --LKTLLALGCHIAHSDEAAEDDLKKMKLPKN-YMLSNGYKPAPLDLSDIKLLPPQEALVDKLAENAHNVWAKDRIKQGW 1022 (5019)
T ss_pred --HHHHHHhcccccccChhhhhHHHhccCCcc-eeccCCCCCCCCcHHhcccCCcHHHHHHHHHHhhhhhhHHHHHhccc
Q ss_pred ccccccCCCCCCCCCccCCCCCCHHHHHhhhhhhHHHHHHHHHccceecCCCcchhhHHHHHhhhccccceeEEeeccce
Q psy13309 929 TYGLNEDPDMARSPHLVPYGKVDDAIKKANRDTASETVRTLLVYGYNLDPPTGEQQDALLAEQNRIRFMSFRTYRAEKNY 1008 (1568)
Q Consensus 929 tyG~~rd~~~k~hP~Lvpy~~L~e~eK~~dr~~~~e~lk~ll~~Gy~i~~p~~~~~~~~~~~~~~~~~~~~R~~R~e~ty 1008 (1568)
|||.++|.++|++|.||||..|++..|+.|+++.+|.++|++.+||+|++|++| ..++..+......++||+||+|++|
T Consensus 1023 tygiqqd~knkrnprlvpy~~lddrtkksnkdslreavrt~~gygynie~~dqd-l~~a~~e~~sgt~dk~r~fr~eksy 1101 (5019)
T KOG2243|consen 1023 TYGIQQDLKNKRNPRLVPYALLDDRTKKSNKDSLREAVRTFLGYGYNIEAPDQD-LAAAAAEKCSGTGDKFRFFRAEKSY 1101 (5019)
T ss_pred chhhhhHhhccCCCccccccccchhhcccchHHHHHHHHHHhcccccCCCCchh-HHHHHHHHhcCCcceeEEEeeehhh
Q ss_pred eeecceeEEEEEEeeCCceEEeeccCCCCCCCCCCCCCCceeEeCCcc---ccccCCCCCCCCCCceEE-----------
Q psy13309 1009 AVSSGKWYFEFEILTAGPMRVGWARVDCAPGAQLGSDENSWAFDGFNR---HIKINLFQQDKKDYSISG----------- 1074 (1568)
Q Consensus 1009 ~v~~GkwYfEv~v~t~G~mrvGWa~~~~~~~~~vG~D~~Sy~fdG~~~---h~~~~~yG~~w~~GDVvG----------- 1074 (1568)
||.+|||||||+++|.|.||||||+|+|+||.++|.|+..|+|||+++ |+|.++||+.|++|||||
T Consensus 1102 avkagkwyfefe~vt~gdmrvgwarpgc~pd~elgadd~af~fdg~k~qrwhqg~~~~grswq~gdvvgcmi~l~d~sm~ 1181 (5019)
T KOG2243|consen 1102 AVKAGKWYFEFETVTAGDMRVGWARPGCQPDQELGADDQAFAFDGFKAQRWHQGNEHFGRSWQAGDVVGCMIDLDDASMI 1181 (5019)
T ss_pred eeeccceEEEEEEeeccceeecccCCCCCcchhhCCccceeeeccchhhhhhccccccccccCCCCeEEEEEecccceEE
Q ss_pred EEeCCccccccCCCcccccccc-CCccceeeeecCCcEEEEEeCCCccccccccccCCCCCcccccccccccchhhhccc
Q psy13309 1075 FSLNGELLMDALGGETTFADVQ-GEGFVPACTLGVGQRAKLTFGQDVNQLKYFSMCGLQEGYEPFCVNMKRAVTYWYTRD 1153 (1568)
Q Consensus 1075 F~lNG~~l~~~~g~g~AF~di~-~~~~~Pa~SL~~~q~~~~NfG~~~~~~ky~~~~~~qeg~~p~~~~~~~~~~~w~~~~ 1153 (1568)
|++||+.|.+..|++.||.|+. ++||.|.|+|+..|++|+|||.|++||||||+||+||||+||++||+|+++|||+|+
T Consensus 1182 ftlngeili~~~gselaf~d~di~~gfipic~lg~aqigrmn~g~d~st~k~~ticglqeg~epfavn~nrdi~mw~skr 1261 (5019)
T KOG2243|consen 1182 FTLNGEILIDDKGSELAFADFDIEDGFIPICCLGLAQIGRMNFGKDASTFKFFTICGLQEGFEPFAVNMNRDIAMWFSKR 1261 (5019)
T ss_pred EEEcCeEEEcCCCCeeeeccccccCCceeeeehhhHhhcccccCCcccceeeeeeecccccCccceecccchHHHHHHhh
Q ss_pred ccceeecCCCCCceEEEEeCCCCCCCCcceeeeccc-ccCCCCceEEEEeccceeeccccc-------------------
Q psy13309 1154 QPIFENTDDYPSVIDVTRIPAGSDTPPCLKISHNTF-ETMEKANWEFLRLSLPVTCMSTFI------------------- 1213 (1568)
Q Consensus 1154 ~~~f~~~~~~~~~~~v~r~~~~~~~~p~lk~~~~~~-~~~~~~~~~~~rls~pv~~~~~~~------------------- 1213 (1568)
+|+|.++|.+|+||||+||+||+|+|||||||||+| +++++++|.|+||||||+|++.|.
T Consensus 1262 lp~f~~vp~~h~hiev~ridgtids~pclkvt~ksfgsqnsn~di~~~rlsmpiec~~~fs~svagglpgaglfgp~~d~ 1341 (5019)
T KOG2243|consen 1262 LPQFLNVPKDHEHIEVMRIDGTIDSPPCLKVTHKSFGSQNSNADIIFCRLSMPIECAESFSHSVAGGLPGAGLFGPCLDL 1341 (5019)
T ss_pred chhhhcCCCCCCceEEEEeccccCCCcchhhhhhhhccCCCCCceEEEEecCchhHHHHhhhhhccCCCCccccCCccch
Q ss_pred ---------------------------------------------cchhhhhhhhhhhhhhhh-------hhHhhh--cC
Q psy13309 1214 ---------------------------------------------DENEKQRRWKEIRNRQQI-------LMMEAV--DN 1239 (1568)
Q Consensus 1214 ---------------------------------------------~~~~~~~~~~~~~~~~~~-------~~~~~~--~~ 1239 (1568)
+.++.++||...+.+++- +.+++. ++
T Consensus 1342 e~ydadsdfevlmktahghlvpdrvdkdkeatkpefnnhkdyaqekpsrlk~rfllrrtkpdystshsarltedvladdk 1421 (5019)
T KOG2243|consen 1342 EAYDADSDFEVLMKTAHGHLVPDRVDKDKEATKPEFNNHKDYAQEKPSRLKQRFLLRRTKPDYSTSHSARLTEDVLADDK 1421 (5019)
T ss_pred hhhcccccHHHHHhhcccccCccccccchhccCccccchhhhhhhcchHHHHHHHhhccCCCccccchhhhhhhhcccch
Q ss_pred CChhhhhhcccc-ceeeeecCCC------------------------------------CCCCccccccccceEEEccCC
Q psy13309 1240 TTPAHIEQIMKS-GFSMSDIKGK------------------------------------SASLPASVDQLRRYIEIKQSD 1282 (1568)
Q Consensus 1240 ~~~~~~~~~~~~-~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~~ 1282 (1568)
++...+++.+++ ||++|||+|| +|+||+|+||+|||| ||+||
T Consensus 1422 ~~~d~l~~tst~cyyairif~gqdpa~vwvgwit~d~h~y~~~fdl~k~~tvtvtlgdekgkvhesikrsncym-v~~gd 1500 (5019)
T KOG2243|consen 1422 DDQDFLMHTSTQCYYAIRIFAGQDPACVWVGWITPDFHLYDEGFDLDKNCTVTVTLGDEKGKVHESIKRSNCYM-VCAGD 1500 (5019)
T ss_pred hhHHHHhhccceeEEEEEEecCCCCceeEEEeecCchhhcccccCcCcceEEEEEeccccccHhhhhhhcceeE-Eeccc
Q ss_pred CCccccccCCce-----------------EecCCCC-------CCCcceeeeeEEeeCccceEeEeccccCccccccccc
Q psy13309 1283 LPSAVAAKKTRE-----------------FRCPPRE-------QPWRCFYCNLFVEATSKEILQIELGRTSTTLPLSAAV 1338 (1568)
Q Consensus 1283 ~~~~~~~~~~~~-----------------f~~~~~~-------ep~~~l~~avfv~pt~~~~~qfelg~~k~~~Plsaa~ 1338 (1568)
..++++.+++++ |-+|||| ||+||+|||||.+|||+++|||||||+||+||||||+
T Consensus 1501 ~~a~~qrs~r~n~~leigc~vd~a~gllsf~angkel~t~yqvep~tk~fpavf~q~ts~~~fqfelgkikn~mplsa~i 1580 (5019)
T KOG2243|consen 1501 IMAPGQRSGRNNNDLEIGCLVDAAMGLLSFIANGKELGTCYQVEPNTKLFPAVFAQATSPNLFQFELGKIKNAMPLSAAI 1580 (5019)
T ss_pred ccccccccCCCCCCceeeehHHhhhhhhhhhccCcccceeEeecCCccccHHHhhccCCCceeeeehhhhcccCcchHHh
Q ss_pred ccccccCCCCCCCCcccceeeccceeeccCCCcceEeeeecccccCceeeecCccchhccccCCCCcccchhhcccchhh
Q psy13309 1339 LQNSERHVIPQFPPRLKVQCLKPHQWARVPNTSLEVHALKLSDIRGWSMLCEDPISMLALHIPEEDRCIDILELIEMEKL 1418 (1568)
Q Consensus 1339 ~~s~~~~~~pqcppRl~vq~l~~~~w~R~p~~~l~~~~~~~~~~~gw~~~c~~p~~~~~l~ipee~r~~dilel~e~~~l 1418 (1568)
|+|++|||+|||||||+||.|+||.|+||||+||+|++.|+|+|+||.|||.||+|||+|||||||||+|||||.|++||
T Consensus 1581 fkse~knpvpqcpprl~vq~i~~vlwsrmpn~flkvd~~riser~gw~vqcldplq~malhipeenr~vdilel~eqedl 1660 (5019)
T KOG2243|consen 1581 FKSEEKNPVPQCPPRLDVQFIQHVLWSRMPNQFLKVDTERISERHGWLVQCLDPLQFMALHIPEENRCVDILELCEQEDL 1660 (5019)
T ss_pred hhhcccCCCCCCCCccchHHHHHHHHHhCcchhhhhhhhhhhhhcchhhhhcCHHHHHhhcCCcccccchHHHHhhHHHH
Q ss_pred hccchhhHHHHHHHhhccChHHHHHhhccCCchhhhHhhhcccCCccccchhhhhhHhhhhhhhHhhhhhhcceEeEecC
Q psy13309 1419 LSFHAHTLTLYAALCYQANYRAAHVLCQHVDQKQLLYAIQSEYMSGPLRQGFYDLLIALHIESHATSMEVCKNEFIIPLG 1498 (1568)
Q Consensus 1419 ~~fh~htl~ly~a~c~~gn~~vah~lc~hvd~~qllyai~~~yl~g~lr~g~ydLli~~hL~~~~~ar~~~~~e~iiPl~ 1498 (1568)
|+||+||||||+|+||+||||||||||||||++||+|||+|.||||.||+|||||||+|||+|+++||+||+||||||||
T Consensus 1661 lkfhyhtlrlysavcalgn~rva~alcshvd~~ql~yaidnkylpgllrag~ydlli~ihlas~~~~klmm~neyiip~t 1740 (5019)
T KOG2243|consen 1661 LKFHYHTLRLYSAVCALGNHRVAHALCSHVDEPQLFYAIDNKYLPGLLRAGFYDLLIDIHLASAAEAKLMMKNEYIIPIT 1740 (5019)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHhccChHHHHHHHhcccchhhhhhhhHHHhHHHhhhhHHHHHHhhcCceEeecc
Q ss_pred cccc--ccccCCcCCCCCCCc-cceeeccCCCcCCCCcccccccccccCCCcchHHHHHHHHHHhcccccc
Q psy13309 1499 PKLK--ELYEDGEMGHSLRSL-RTESIRPTMKMTDIAPDSIENIRSLYSPHFPLDVVRDYIMTARRKQTTC 1566 (1568)
Q Consensus 1499 ~~~~--~l~~~~~~~~~~p~~-~~~slrp~~~~~~~~~~~~~~~~~~~~p~~pl~~lk~~~~~~l~~~~~~ 1566 (1568)
.+|| .||||+.++|+|||+ .+|||||.|.||+||||++++++..+||+||||+||.++|+|||+|+.|
T Consensus 1741 ~~tk~i~lfpde~kkhglpgigl~t~lkp~~~fssp~fv~~~~d~~k~spe~pld~lksk~i~mlteavk~ 1811 (5019)
T KOG2243|consen 1741 EETKNICLFPDENKKHGLPGIGLRTCLKPGFQFSSPCFVSIGEDCQKQSPEFPLDILKSKAIQMLTEAVKC 1811 (5019)
T ss_pred ccccceEecCCcccccCCCCcchhhhcCCCccccCceeEEechhhhhcCCCCchHHHHHHHHHHHHHHHHh
|
|
| >KOG3533|consensus | Back alignment and domain information |
|---|
| >KOG2243|consensus | Back alignment and domain information |
|---|
| >PF01365 RYDR_ITPR: RIH domain; InterPro: IPR000699 Ryanodine and Inositol 1,4,5-trisphosphate (IP3) receptors are intracellular Ca2+-release channels | Back alignment and domain information |
|---|
| >PF02026 RyR: RyR domain; InterPro: IPR003032 This domain is called RyR for Ryanodine receptor [] | Back alignment and domain information |
|---|
| >PF02026 RyR: RyR domain; InterPro: IPR003032 This domain is called RyR for Ryanodine receptor [] | Back alignment and domain information |
|---|
| >PF08709 Ins145_P3_rec: Inositol 1,4,5-trisphosphate/ryanodine receptor; InterPro: IPR014821 This domain corresponds to the ligand binding region on inositol 1,4,5-trisphosphate receptor, and the N-terminal region of the ryanodine receptor | Back alignment and domain information |
|---|
| >KOG2626|consensus | Back alignment and domain information |
|---|
| >PF02815 MIR: MIR domain; InterPro: IPR003608 The MIR domain is named after three of the proteins in which it occurs: protein Mannosyltransferase (2 | Back alignment and domain information |
|---|
| >KOG0349|consensus | Back alignment and domain information |
|---|
| >KOG0349|consensus | Back alignment and domain information |
|---|
| >PF00622 SPRY: SPRY domain; InterPro: IPR003877 The SPRY domain is of unknown function | Back alignment and domain information |
|---|
| >smart00449 SPRY Domain in SPla and the RYanodine Receptor | Back alignment and domain information |
|---|
| >PF00622 SPRY: SPRY domain; InterPro: IPR003877 The SPRY domain is of unknown function | Back alignment and domain information |
|---|
| >smart00449 SPRY Domain in SPla and the RYanodine Receptor | Back alignment and domain information |
|---|
| >KOG3533|consensus | Back alignment and domain information |
|---|
| >KOG4030|consensus | Back alignment and domain information |
|---|
| >KOG2626|consensus | Back alignment and domain information |
|---|
| >PF01365 RYDR_ITPR: RIH domain; InterPro: IPR000699 Ryanodine and Inositol 1,4,5-trisphosphate (IP3) receptors are intracellular Ca2+-release channels | Back alignment and domain information |
|---|
| >KOG4367|consensus | Back alignment and domain information |
|---|
| >KOG1477|consensus | Back alignment and domain information |
|---|
| >KOG3359|consensus | Back alignment and domain information |
|---|
| >KOG2242|consensus | Back alignment and domain information |
|---|
| >KOG3953|consensus | Back alignment and domain information |
|---|
| >KOG4367|consensus | Back alignment and domain information |
|---|
| >KOG3358|consensus | Back alignment and domain information |
|---|
| >KOG3358|consensus | Back alignment and domain information |
|---|
| >KOG3953|consensus | Back alignment and domain information |
|---|
| >KOG4030|consensus | Back alignment and domain information |
|---|
| >PF02815 MIR: MIR domain; InterPro: IPR003608 The MIR domain is named after three of the proteins in which it occurs: protein Mannosyltransferase (2 | Back alignment and domain information |
|---|
| >PF08709 Ins145_P3_rec: Inositol 1,4,5-trisphosphate/ryanodine receptor; InterPro: IPR014821 This domain corresponds to the ligand binding region on inositol 1,4,5-trisphosphate receptor, and the N-terminal region of the ryanodine receptor | Back alignment and domain information |
|---|
| >smart00472 MIR Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases | Back alignment and domain information |
|---|
| >COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >smart00472 MIR Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases | Back alignment and domain information |
|---|
| >KOG1477|consensus | Back alignment and domain information |
|---|
| >KOG2242|consensus | Back alignment and domain information |
|---|
| >KOG3359|consensus | Back alignment and domain information |
|---|
| >COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1568 | ||||
| 4i6i_A | 559 | Crystal Structure Of Rabbit Ryanodine Receptor 1 (r | 1e-105 | ||
| 2xoa_A | 559 | Crystal Structure Of The N-Terminal Three Domains O | 1e-105 | ||
| 4i7i_A | 536 | Crystal Structure Of Rabbit Ryanodine Receptor 1 (r | 1e-101 | ||
| 4i0y_A | 536 | Crystal Structure Of Rabbit Ryanodine Receptor 1 (r | 1e-100 | ||
| 4i3n_A | 536 | Crystal Structure Of Rabbit Ryanodine Receptor 1 (r | 1e-100 | ||
| 4i8m_A | 536 | Crystal Structure Of Rabbit Ryanodine Receptor 1 (r | 1e-100 | ||
| 4i2s_A | 536 | Crystal Structure Of Rabbit Ryanodine Receptor 1 (r | 1e-100 | ||
| 4i37_A | 536 | Crystal Structure Of Rabbit Ryanodine Receptor 1 (r | 1e-100 | ||
| 4i1e_A | 536 | Crystal Structure Of Rabbit Ryanodine Receptor 1 (r | 1e-100 | ||
| 4i96_A | 320 | Crystal Structure Of The N-terminal Two Domains Of | 2e-69 | ||
| 3im5_A | 217 | Crystal Structure Of Mouse Ryanodine Receptor 2 (Re | 6e-30 | ||
| 3im7_A | 217 | Crystal Structure Of Mouse Ryanodine Receptor 2 N-T | 6e-30 | ||
| 3qr5_A | 185 | Structure Of The First Domain Of A Cardiac Ryanodin | 6e-30 | ||
| 3im6_A | 217 | Crystal Structure Of Mouse Ryanodine Receptor 2 Mut | 1e-29 | ||
| 3ila_A | 197 | Crystal Structure Of Rabbit Ryanodine Receptor 1 N- | 3e-28 | ||
| 3hsm_A | 213 | Crystal Structure Of Distal N-Terminal Beta-Trefoil | 3e-28 | ||
| 4erv_A | 207 | Crystal Structure Of Human Ryanodine Receptor 3 (25 | 5e-18 | ||
| 4erv_A | 207 | Crystal Structure Of Human Ryanodine Receptor 3 (25 | 1e-08 | ||
| 4esu_A | 210 | Crystal Structure Of Rabbit Ryanodine Receptor 1 Mu | 2e-17 | ||
| 4esu_A | 210 | Crystal Structure Of Rabbit Ryanodine Receptor 1 Mu | 2e-07 | ||
| 4etu_A | 210 | Crystal Structure Of Rabbit Ryanodine Receptor 1 Mu | 1e-16 | ||
| 4etu_A | 210 | Crystal Structure Of Rabbit Ryanodine Receptor 1 Mu | 1e-07 | ||
| 4ert_A | 210 | Crystal Structure Of Rabbit Ryanodine Receptor 1 (2 | 1e-16 | ||
| 4ert_A | 210 | Crystal Structure Of Rabbit Ryanodine Receptor 1 (2 | 1e-07 | ||
| 3rqr_A | 227 | Crystal Structure Of The Ryr Domain Of The Rabbit R | 2e-16 | ||
| 3rqr_A | 227 | Crystal Structure Of The Ryr Domain Of The Rabbit R | 1e-07 | ||
| 4ett_A | 210 | Crystal Structure Of Rabbit Ryanodine Receptor 1 Mu | 5e-16 | ||
| 4ett_A | 210 | Crystal Structure Of Rabbit Ryanodine Receptor 1 Mu | 1e-07 | ||
| 4etv_A | 209 | Crystal Structure Of Mouse Ryanodine Receptor 2 (26 | 4e-15 | ||
| 4etv_A | 209 | Crystal Structure Of Mouse Ryanodine Receptor 2 (26 | 6e-08 | ||
| 3nrt_A | 103 | The Crystal Strucutre Of Putative Ryanodine Recepto | 7e-14 | ||
| 3nrt_A | 103 | The Crystal Strucutre Of Putative Ryanodine Recepto | 1e-12 | ||
| 3uj0_A | 604 | Crystal Structure Of The Inositol 1,4,5-Trisphospha | 7e-05 |
| >pdb|4I6I|A Chain A, Crystal Structure Of Rabbit Ryanodine Receptor 1 (residues 1-559) Disease Mutant R45c Length = 559 | Back alignment and structure |
|
| >pdb|2XOA|A Chain A, Crystal Structure Of The N-Terminal Three Domains Of The Skeletal Muscle Ryanodine Receptor (Ryr1) Length = 559 | Back alignment and structure |
| >pdb|4I7I|A Chain A, Crystal Structure Of Rabbit Ryanodine Receptor 1 (residues 1-536) Disease Mutant L14r Length = 536 | Back alignment and structure |
| >pdb|4I0Y|A Chain A, Crystal Structure Of Rabbit Ryanodine Receptor 1 (residues 1-536) Disease Mutant C36r Length = 536 | Back alignment and structure |
| >pdb|4I3N|A Chain A, Crystal Structure Of Rabbit Ryanodine Receptor 1 (residues 1-536) Disease Mutant D61n Length = 536 | Back alignment and structure |
| >pdb|4I8M|A Chain A, Crystal Structure Of Rabbit Ryanodine Receptor 1 (residues 1-536) Disease Mutant V219i Length = 536 | Back alignment and structure |
| >pdb|4I2S|A Chain A, Crystal Structure Of Rabbit Ryanodine Receptor 1 (residues 1-536) Disease Mutant I404m Length = 536 | Back alignment and structure |
| >pdb|4I37|A Chain A, Crystal Structure Of Rabbit Ryanodine Receptor 1 (residues 1-536) Disease Mutant R402g Length = 536 | Back alignment and structure |
| >pdb|4I1E|A Chain A, Crystal Structure Of Rabbit Ryanodine Receptor 1 (residues 1-536) Disease Mutant G249r Length = 536 | Back alignment and structure |
| >pdb|4I96|A Chain A, Crystal Structure Of The N-terminal Two Domains Of The Skeletal Muscle Ryanodine Receptor (rabbit Ryr1) Residues 217-536 Length = 320 | Back alignment and structure |
| >pdb|3IM5|A Chain A, Crystal Structure Of Mouse Ryanodine Receptor 2 (Residues 1-217) Length = 217 | Back alignment and structure |
| >pdb|3IM7|A Chain A, Crystal Structure Of Mouse Ryanodine Receptor 2 N-Terminal Domain (1-217) Disease Mutant A77v Length = 217 | Back alignment and structure |
| >pdb|3QR5|A Chain A, Structure Of The First Domain Of A Cardiac Ryanodine Receptor Mutant With Exon 3 Deleted Length = 185 | Back alignment and structure |
| >pdb|3IM6|A Chain A, Crystal Structure Of Mouse Ryanodine Receptor 2 Mutant V186m Length = 217 | Back alignment and structure |
| >pdb|3ILA|A Chain A, Crystal Structure Of Rabbit Ryanodine Receptor 1 N-Terminal Domain (9- 205) Length = 197 | Back alignment and structure |
| >pdb|3HSM|A Chain A, Crystal Structure Of Distal N-Terminal Beta-Trefoil Domain Of Ryanodine Receptor Type 1 Length = 213 | Back alignment and structure |
| >pdb|4ERV|A Chain A, Crystal Structure Of Human Ryanodine Receptor 3 (2597-2800) Length = 207 | Back alignment and structure |
| >pdb|4ERV|A Chain A, Crystal Structure Of Human Ryanodine Receptor 3 (2597-2800) Length = 207 | Back alignment and structure |
| >pdb|4ESU|A Chain A, Crystal Structure Of Rabbit Ryanodine Receptor 1 Mutant S2776m Length = 210 | Back alignment and structure |
| >pdb|4ESU|A Chain A, Crystal Structure Of Rabbit Ryanodine Receptor 1 Mutant S2776m Length = 210 | Back alignment and structure |
| >pdb|4ETU|A Chain A, Crystal Structure Of Rabbit Ryanodine Receptor 1 Mutant R2939s Length = 210 | Back alignment and structure |
| >pdb|4ETU|A Chain A, Crystal Structure Of Rabbit Ryanodine Receptor 1 Mutant R2939s Length = 210 | Back alignment and structure |
| >pdb|4ERT|A Chain A, Crystal Structure Of Rabbit Ryanodine Receptor 1 (2734-2940) Length = 210 | Back alignment and structure |
| >pdb|4ERT|A Chain A, Crystal Structure Of Rabbit Ryanodine Receptor 1 (2734-2940) Length = 210 | Back alignment and structure |
| >pdb|3RQR|A Chain A, Crystal Structure Of The Ryr Domain Of The Rabbit Ryanodine Receptor Length = 227 | Back alignment and structure |
| >pdb|3RQR|A Chain A, Crystal Structure Of The Ryr Domain Of The Rabbit Ryanodine Receptor Length = 227 | Back alignment and structure |
| >pdb|4ETT|A Chain A, Crystal Structure Of Rabbit Ryanodine Receptor 1 Mutant E2764k Length = 210 | Back alignment and structure |
| >pdb|4ETT|A Chain A, Crystal Structure Of Rabbit Ryanodine Receptor 1 Mutant E2764k Length = 210 | Back alignment and structure |
| >pdb|4ETV|A Chain A, Crystal Structure Of Mouse Ryanodine Receptor 2 (2699-2904) Length = 209 | Back alignment and structure |
| >pdb|4ETV|A Chain A, Crystal Structure Of Mouse Ryanodine Receptor 2 (2699-2904) Length = 209 | Back alignment and structure |
| >pdb|3NRT|A Chain A, The Crystal Strucutre Of Putative Ryanodine Receptor From Bacteroides Thetaiotaomicron Vpi-5482 Length = 103 | Back alignment and structure |
| >pdb|3NRT|A Chain A, The Crystal Strucutre Of Putative Ryanodine Receptor From Bacteroides Thetaiotaomicron Vpi-5482 Length = 103 | Back alignment and structure |
| >pdb|3UJ0|A Chain A, Crystal Structure Of The Inositol 1,4,5-Trisphosphate Receptor With Ligand Bound Form. Length = 604 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2xoa_A Ryanodine receptor 1; metal transport, calcium channel, ION channel, membrane PROT malignant hyperthermia, cardiac arrhythmia; 2.50A {Oryctolagus cuniculus} Length = 559 | Back alignment and structure |
|---|
Score = 443 bits (1140), Expect = e-140
Identities = 210/455 (46%), Positives = 293/455 (64%), Gaps = 15/455 (3%)
Query: 1 YLACLSTS-SSNDKLSFDVGLQEHSQGEACWWTVHPASKQRSEGEKVRVGDDLILVSVAT 59
YL+CL+TS S DKL+FDVGLQE + GEACWWT+HPASKQRSEGEKVRVGDDLILVSV++
Sbjct: 117 YLSCLTTSRSMTDKLAFDVGLQEDATGEACWWTMHPASKQRSEGEKVRVGDDLILVSVSS 176
Query: 60 ERYLHTTKENDLSVVNASFHVTHWSVQPYGTGISRMKYVMCLEVMSCGSSTEVTNVSLYL 119
ERYLH + + V+ASF T W++ P + YV V+ ++ L
Sbjct: 177 ERYLHLSTASGELQVDASFMQTLWNMNPICSCCEE-GYVTGGHVLRLFHG----HMDECL 231
Query: 120 HPGLICPDRSKYLFHIVVYEGGSVMSQARSLWRLELARTKWAGGFINWYHPMRIRHLTTG 179
D + +V YEGG+V + ARSLWRLE R W+G + W P+RIRH+TTG
Sbjct: 232 TISAADSDDQR---RLVYYEGGAVCTHARSLWRLEPLRISWSGSHLRWGQPLRIRHVTTG 288
Query: 180 RYLSTNENNELYLVTRDEATTASSTFCLRQEKDDQKIVLEDKDLEVIGAPIIKYGDSTVL 239
RYL+ E+ L +V +A T +++FC R K+ + +D+E +G P IKYG+S
Sbjct: 289 RYLALTEDQGLVVVDACKAHTKATSFCFRVSKEKLDTAPK-RDVEGMGPPEIKYGESLCF 347
Query: 240 VQHSENGLWLTYKSYETKKKGLGKVEEKQAVLHEEGKMDDGLDFSRSQEEESRTARVIRK 299
VQH +GLWLTY + + K LG V +K+A+LH+EG MDD L +R Q+EES+ AR+I
Sbjct: 348 VQHVASGLWLTYAAPDPKALRLG-VLKKKAILHQEGHMDDALFLTRCQQEESQAARMIHS 406
Query: 300 CSSLFTQFISGLEALQVNRRHSLFCA--SVNLNEMVMCLEDLINYFAQPEEDMEHEEKQN 357
+ L+ QFI GL++ R S A ++ + +++ L+DLI YF P E+++HEEKQ+
Sbjct: 407 TAGLYNQFIKGLDSFSGKPRGSGPPAGPALPIEAVILSLQDLIGYFEPPSEELQHEEKQS 466
Query: 358 RLRALRNRQDLFQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQSWDIISGYLYQLL 417
+LR+LRNRQ LFQEEG+L+L+L ID++NV T+ AG+E+ +SW I LY+LL
Sbjct: 467 KLRSLRNRQSLFQEEGMLSLVLNCIDRLNVYTTAAHFAEYAGEEAAESWKEIVNLLYELL 526
Query: 418 AAIIKGNHTNCAQFANTNRLNWLFSRLGSQASSEG 452
A++I+GN NCA F+ L+W+ S+L +S G
Sbjct: 527 ASLIRGNRANCALFS--TNLDWVVSKLDRLEASSG 559
|
| >3uj4_A Inositol 1,4,5-trisphosphate receptor type 1; APO-state, suppressor domain, binding core domain, signaling protein; 3.00A {Rattus norvegicus} PDB: 3uj0_A 3t8s_A* Length = 604 | Back alignment and structure |
|---|
| >4esu_A Ryanodine receptor 1; phosphorylation, skeletal, metal transport; 1.59A {Oryctolagus cuniculus} PDB: 4ert_A 4ett_A 4etu_A 3rqr_A Length = 210 | Back alignment and structure |
|---|
| >4esu_A Ryanodine receptor 1; phosphorylation, skeletal, metal transport; 1.59A {Oryctolagus cuniculus} PDB: 4ert_A 4ett_A 4etu_A 3rqr_A Length = 210 | Back alignment and structure |
|---|
| >4erv_A Ryanodine receptor 3; metal transport; 1.75A {Homo sapiens} Length = 207 | Back alignment and structure |
|---|
| >4erv_A Ryanodine receptor 3; metal transport; 1.75A {Homo sapiens} Length = 207 | Back alignment and structure |
|---|
| >4etv_A Ryanodine receptor 2; phosphorylation, cardiac, metal transport; 1.65A {Mus musculus} Length = 209 | Back alignment and structure |
|---|
| >4etv_A Ryanodine receptor 2; phosphorylation, cardiac, metal transport; 1.65A {Mus musculus} Length = 209 | Back alignment and structure |
|---|
| >4etv_A Ryanodine receptor 2; phosphorylation, cardiac, metal transport; 1.65A {Mus musculus} Length = 209 | Back alignment and structure |
|---|
| >1n4k_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3-binding core, calcium channel,protein- ligand complex, B-trefoil fold; HET: I3P; 2.20A {Mus musculus} SCOP: a.118.22.1 b.42.6.1 Length = 381 | Back alignment and structure |
|---|
| >3im6_A Cardiac Ca2+ release channel; ryanodine receptor 2, calcium release channel, ION channel, arrhythmia, CPVT, ARVD2, ARVC2, disease mutation; 1.70A {Mus musculus} PDB: 3im5_A 3im7_A 3qr5_A 3ila_A 3hsm_A Length = 217 | Back alignment and structure |
|---|
| >3nrt_A Putative ryanodine receptor; PSI-2, protein structure initiative, structural genomics, MI center for structural genomics (MCSG); 2.54A {Bacteroides thetaiotaomicron} Length = 103 | Back alignment and structure |
|---|
| >3nrt_A Putative ryanodine receptor; PSI-2, protein structure initiative, structural genomics, MI center for structural genomics (MCSG); 2.54A {Bacteroides thetaiotaomicron} Length = 103 | Back alignment and structure |
|---|
| >1xzz_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3 receptor suppressor domain, calcium channe trefoil fold, membrane protein; 1.80A {Mus musculus} PDB: 3jrr_A Length = 246 | Back alignment and structure |
|---|
| >3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens} Length = 213 | Back alignment and structure |
|---|
| >3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens} Length = 213 | Back alignment and structure |
|---|
| >2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens} Length = 171 | Back alignment and structure |
|---|
| >2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens} Length = 171 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A Length = 217 | Back alignment and structure |
|---|
| >3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A Length = 217 | Back alignment and structure |
|---|
| >2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A Length = 212 | Back alignment and structure |
|---|
| >2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A Length = 212 | Back alignment and structure |
|---|
| >2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22 Length = 226 | Back alignment and structure |
|---|
| >2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22 Length = 226 | Back alignment and structure |
|---|
| >3mal_A Stromal cell-derived factor 2-like protein; trefoil fold, MIR motifs, unfolded protein response, putativ binding protein, plant protein; 1.95A {Arabidopsis thaliana} Length = 199 | Back alignment and structure |
|---|
| >1t9f_A Protein 1D10; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Caenorhabditis elegans} SCOP: b.42.6.1 Length = 187 | Back alignment and structure |
|---|
| >2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B Length = 591 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1568 | |||
| 2xoa_A | 559 | Ryanodine receptor 1; metal transport, calcium cha | 100.0 | |
| 3uj4_A | 604 | Inositol 1,4,5-trisphosphate receptor type 1; APO- | 100.0 | |
| 4esu_A | 210 | Ryanodine receptor 1; phosphorylation, skeletal, m | 100.0 | |
| 4etv_A | 209 | Ryanodine receptor 2; phosphorylation, cardiac, me | 100.0 | |
| 4erv_A | 207 | Ryanodine receptor 3; metal transport; 1.75A {Homo | 100.0 | |
| 1n4k_A | 381 | Inositol 1,4,5-trisphosphate receptor type 1; IP3 | 100.0 | |
| 3nrt_A | 103 | Putative ryanodine receptor; PSI-2, protein struct | 99.96 | |
| 4etv_A | 209 | Ryanodine receptor 2; phosphorylation, cardiac, me | 99.91 | |
| 4erv_A | 207 | Ryanodine receptor 3; metal transport; 1.75A {Homo | 99.91 | |
| 4esu_A | 210 | Ryanodine receptor 1; phosphorylation, skeletal, m | 99.9 | |
| 3toj_A | 213 | SET1/ASH2 histone methyltransferase complex subun; | 99.9 | |
| 3im6_A | 217 | Cardiac Ca2+ release channel; ryanodine receptor 2 | 99.89 | |
| 2yyo_A | 171 | SPRY domain-containing protein 3; NPPSFA, national | 99.88 | |
| 3nrt_A | 103 | Putative ryanodine receptor; PSI-2, protein struct | 99.87 | |
| 1xzz_A | 246 | Inositol 1,4,5-trisphosphate receptor type 1; IP3 | 99.83 | |
| 3toj_A | 213 | SET1/ASH2 histone methyltransferase complex subun; | 99.71 | |
| 2yyo_A | 171 | SPRY domain-containing protein 3; NPPSFA, national | 99.63 | |
| 1t9f_A | 187 | Protein 1D10; structural genomics, PSI, protein st | 99.54 | |
| 2jk9_A | 212 | SPRY domain-containing SOCS box protein 1; transcr | 99.38 | |
| 3emw_A | 217 | SPRY domain-containing SOCS box protein 2; apoptos | 99.35 | |
| 2afj_A | 226 | Gene rich cluster, C9 gene; beta sandwich, gene re | 99.14 | |
| 3mal_A | 199 | Stromal cell-derived factor 2-like protein; trefoi | 98.93 | |
| 2jk9_A | 212 | SPRY domain-containing SOCS box protein 1; transcr | 98.76 | |
| 3emw_A | 217 | SPRY domain-containing SOCS box protein 2; apoptos | 98.71 | |
| 3uj4_A | 604 | Inositol 1,4,5-trisphosphate receptor type 1; APO- | 98.54 | |
| 2xoa_A | 559 | Ryanodine receptor 1; metal transport, calcium cha | 98.49 | |
| 2afj_A | 226 | Gene rich cluster, C9 gene; beta sandwich, gene re | 98.33 | |
| 1t9f_A | 187 | Protein 1D10; structural genomics, PSI, protein st | 97.62 | |
| 3mal_A | 199 | Stromal cell-derived factor 2-like protein; trefoi | 97.42 | |
| 1n4k_A | 381 | Inositol 1,4,5-trisphosphate receptor type 1; IP3 | 96.62 | |
| 2e63_A | 170 | KIAA1787 protein; structure genomics, neuralized d | 92.46 | |
| 3grl_A | 651 | General vesicular transport factor P115; vesicle t | 89.1 | |
| 1xzz_A | 246 | Inositol 1,4,5-trisphosphate receptor type 1; IP3 | 88.49 | |
| 3uv9_A | 186 | TRIM5alpha, tripartite motif-containing protein 5; | 87.31 | |
| 2vok_A | 188 | 52 kDa RO protein; polymorphism, immune system, me | 85.85 | |
| 3grl_A | 651 | General vesicular transport factor P115; vesicle t | 85.11 | |
| 1q1u_A | 144 | FGF-12, fibrobast growth factor homologous factor | 82.05 | |
| 2wl1_A | 191 | Pyrin, marenostrin; amyloidosis, polymorphism, cyt | 81.01 |
| >2xoa_A Ryanodine receptor 1; metal transport, calcium channel, ION channel, membrane PROT malignant hyperthermia, cardiac arrhythmia; 2.50A {Oryctolagus cuniculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-78 Score=747.22 Aligned_cols=435 Identities=48% Similarity=0.833 Sum_probs=331.3
Q ss_pred CccccCcC-cccccccceEEEeeCCCCceeEEEEEcccccccCCCceecCCEEEEEEccCCCcccccCCCCceEEEeeec
Q psy13309 1 YLACLSTS-SSNDKLSFDVGLQEHSQGEACWWTVHPASKQRSEGEKVRVGDDLILVSVATERYLHTTKENDLSVVNASFH 79 (1568)
Q Consensus 1 YL~cl~~s-S~~eK~af~V~L~e~~~~E~cwF~I~P~~K~RseGe~VrvgD~ViLvsv~s~~yLH~S~~~~~~EVnaS~~ 79 (1568)
||+|++++ |+.||+||+|+|+++.++++|||+|+|+||+|++||+|++||+|+|+++++++|||+|..+++.||+++++
T Consensus 117 ~L~~~~~~~s~~ek~a~~V~L~~~~~~~~s~f~I~p~~k~r~~G~~V~~Gd~V~L~~~~t~~~LH~S~~~gs~eVt~~d~ 196 (559)
T 2xoa_A 117 YLSCLTTSRSMTDKLAFDVGLQEDATGEACWWTMHPASKQRSEGEKVRVGDDLILVSVSSERYLHLSTASGELQVDASFM 196 (559)
T ss_dssp EEEECSCCC----CCCEEEEEESSCCSSTTEEEEEESSTTSCTTSBCBTTCEEEEEETTTCCEEEEEC----CEEEEESS
T ss_pred EEEEcCcCcccccccceEEEEEecCCCCCcEEEEEcCccccCCCCccccCCEEEEEECCCCCcccccCCCCCeEEEeccC
Confidence 79999999 99999999999996699999999999999999999999999999999999999999999889999999999
Q ss_pred eeeEEEEEeecccccccccccccccccCCCCCCCcEEEEccCCCCc----cCc-cccceeEEEEecCccccCCcceEEEe
Q psy13309 80 VTHWSVQPYGTGISRMKYVMCLEVMSCGSSTEVTNVSLYLHPGLIC----PDR-SKYLFHIVVYEGGSVMSQARSLWRLE 154 (1568)
Q Consensus 80 ~T~WkI~lf~s~~~~~~~~~~~~~yLkG~~lr~GDVVRLfH~E~~~----~~~-~~~~~~v~~~e~g~~~tsa~sLWeIE 154 (1568)
+|.|+|.+|+++. + .++|+| ||||||||++.+. ... ++.+.+++.|.++...++++++|+||
T Consensus 197 nt~W~I~~~~~~~------~--~~~l~~-----GDvIRL~H~~t~~~L~~~~~~s~~~~ev~~y~~~~~~~d~~~~W~VE 263 (559)
T 2xoa_A 197 QTLWNMNPICSCC------E--EGYVTG-----GHVLRLFHGHMDECLTISAADSDDQRRLVYYEGGAVCTHARSLWRLE 263 (559)
T ss_dssp CCCEEEEEEECCC------C--TTBCBT-----TCEEEEECC---CEEEECCTTCTTTTCBEEEECGGGGGSGGGCEEEE
T ss_pred CCeEEEEEcccCC------c--cccccC-----CCEEEEEecCCCceeeccCCCcccceEEEeecCCCcCCCCCceEEEE
Confidence 9999999995532 2 567777 8999999999641 111 23456799999998889999999999
Q ss_pred ecccccCCccceecCceEEEEcCCCceeeeeecCccccccccccCCCCcceEeeccccccccccccccccccCCcceeeC
Q psy13309 155 LARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNELYLVTRDEATTASSTFCLRQEKDDQKIVLEDKDLEVIGAPIIKYG 234 (1568)
Q Consensus 155 ~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~l~~~~~a~~~~T~F~f~~~ke~~~~v~~~~di~~m~~~~I~~g 234 (1568)
+++.+|+||.+.|++.|||||++||+||++.++.++++++.+++++..++|||++++++.+. ..++|.++|++++|.++
T Consensus 264 ~v~~~~~G~~~~~~~~fRLrH~~TG~YL~~~~~~~~~~~~~~~~~~~~s~F~f~~~~~~~~~-~~~~d~~~~~~~~i~~~ 342 (559)
T 2xoa_A 264 PLRISWSGSHLRWGQPLRIRHVTTGRYLALTEDQGLVVVDACKAHTKATSFCFRVSKEKLDT-APKRDVEGMGPPEIKYG 342 (559)
T ss_dssp ESCSTTTTSBCCTTCCEEEEETTTCCEEEEETTTEEEEECGGGCCHHHHCEEEESSSSCC-----CCCCSSSCCCCCBTT
T ss_pred EeccccCCCceEeCCeEEEEECCcCCeeeEcCCCCcccccccccCCCccEEEEeecCCcccc-ccccccccccCceEeec
Confidence 99999999999999999999999999999998877777777778888999999998776543 24666688999999999
Q ss_pred CcEEEEEEcccCeeeEeeecccccccCChhhhhceEeccccccccccceeccchHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy13309 235 DSTVLVQHSENGLWLTYKSYETKKKGLGKVEEKQAVLHEEGKMDDGLDFSRSQEEESRTARVIRKCSSLFTQFISGLEAL 314 (1568)
Q Consensus 235 dSyvrIqH~~Tg~WL~~~~~~~~~~~~~~~e~~k~il~~~g~~dD~f~~~~v~~eEvrd~~~i~s~~~~l~~Fi~~L~~~ 314 (1568)
||||||||++||+|||+++.+.+...+|.. +++|+++++|+|+|+|+|++|+.+|+|+++||++|+++|++|+++|+..
T Consensus 343 ds~vrl~H~~T~~WL~~~~~~~~~~~i~~~-~~~~vl~~~g~~~d~F~i~~~~~~e~~e~~~i~~~~~~l~~fi~~L~~~ 421 (559)
T 2xoa_A 343 ESLCFVQHVASGLWLTYAAPDPKALRLGVL-KKKAILHQEGHMDDALFLTRCQQEESQAARMIHSTAGLYNQFIKGLDSF 421 (559)
T ss_dssp TCCBEEEETTTCCEEEECC---------CC-EEEEEEESSCCTTCCBEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEEecCCCeEeeccccccccccCcc-ceeeeeeeccccccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999876665566665 6789999999999999999999999999999999999999999999976
Q ss_pred h-cccccc-cccccccHHHHHHHHHHHHhHccCCCcchhhHHHhhhhccchhhhhhhhhhhhHHHHHHHHhhcccccCcc
Q psy13309 315 Q-VNRRHS-LFCASVNLNEMVMCLEDLINYFAQPEEDMEHEEKQNRLRALRNRQDLFQEEGILNLILEAIDKINVITSQG 392 (1568)
Q Consensus 315 ~-~~~~~~-~~~~~~~l~~v~~~L~dLI~F~~~~~~~~~he~kq~~l~p~r~RQkLlREqgvI~lll~iLd~l~~~~~~~ 392 (1568)
+ +++... .-+...+++.++++|+|||+||.++.++++|++||+.++|+|+|||||||||||++|++||++++.+++..
T Consensus 422 ~~~~~~~~~~~~~~~~~~~v~~~L~dLi~F~~~~~~~~~~~~~q~~~~~~r~RQkLlrEq~il~ll~~il~~l~~~~~~~ 501 (559)
T 2xoa_A 422 SGKPRGSGPPAGPALPIEAVILSLQDLIGYFEPPSEELQHEEKQSKLRSLRNRQSLFQEEGMLSLVLNCIDRLNVYTTAA 501 (559)
T ss_dssp SSCCC---------CCHHHHHHHHHHHHHHTCCC---------CCHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTSCC--
T ss_pred ccccccccccccccccHHHHHHHHHHHHHHhcCccccccchhccccccccHHHHHHHhhhchHHHHHHHHHHhhccCchh
Confidence 3 322211 00235679999999999999999988778889999999999999999999999999999999999888888
Q ss_pred ccccccCCcccchHHHHHHHHHHHHHHHHhhccchhhhhhhhhhHHHHHHHhcccccccC
Q psy13309 393 FLVNLAGDESGQSWDIISGYLYQLLAAIIKGNHTNCAQFANTNRLNWLFSRLGSQASSEG 452 (1568)
Q Consensus 393 ~~~~l~~ee~~~~~~~I~~~iY~LL~~lirgN~~N~~~fa~~~~Ld~L~s~l~~~q~~iG 452 (1568)
+++++++++..+.|++|++++|+||+++||||+.||+|++. +|+||++++++++++.|
T Consensus 502 ~~~~~~~~~~~~~~~~i~~~~Y~LL~~~i~~N~~N~~y~~~--~l~~l~~~l~~~~~~~~ 559 (559)
T 2xoa_A 502 HFAEYAGEEAAESWKEIVNLLYELLASLIRGNRANCALFST--NLDWVVSKLDRLEASSG 559 (559)
T ss_dssp ----CCCSTGGGTHHHHHHHHHHHHHHHHCC-----------------------------
T ss_pred hHHHhhcchhHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH--HHHHHHHHhccccccCC
Confidence 99999999988999999999999999999999999998885 59999999999988765
|
| >3uj4_A Inositol 1,4,5-trisphosphate receptor type 1; APO-state, suppressor domain, binding core domain, signaling protein; 3.00A {Rattus norvegicus} PDB: 3uj0_A 3t8s_A* | Back alignment and structure |
|---|
| >4esu_A Ryanodine receptor 1; phosphorylation, skeletal, metal transport; 1.59A {Oryctolagus cuniculus} PDB: 4ert_A 4ett_A 4etu_A 3rqr_A | Back alignment and structure |
|---|
| >4etv_A Ryanodine receptor 2; phosphorylation, cardiac, metal transport; 1.65A {Mus musculus} | Back alignment and structure |
|---|
| >4erv_A Ryanodine receptor 3; metal transport; 1.75A {Homo sapiens} | Back alignment and structure |
|---|
| >1n4k_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3-binding core, calcium channel,protein- ligand complex, B-trefoil fold; HET: I3P; 2.20A {Mus musculus} SCOP: a.118.22.1 b.42.6.1 | Back alignment and structure |
|---|
| >3nrt_A Putative ryanodine receptor; PSI-2, protein structure initiative, structural genomics, MI center for structural genomics (MCSG); 2.54A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >4etv_A Ryanodine receptor 2; phosphorylation, cardiac, metal transport; 1.65A {Mus musculus} | Back alignment and structure |
|---|
| >4erv_A Ryanodine receptor 3; metal transport; 1.75A {Homo sapiens} | Back alignment and structure |
|---|
| >4esu_A Ryanodine receptor 1; phosphorylation, skeletal, metal transport; 1.59A {Oryctolagus cuniculus} PDB: 4ert_A 4ett_A 4etu_A 3rqr_A | Back alignment and structure |
|---|
| >3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens} | Back alignment and structure |
|---|
| >3im6_A Cardiac Ca2+ release channel; ryanodine receptor 2, calcium release channel, ION channel, arrhythmia, CPVT, ARVD2, ARVC2, disease mutation; 1.70A {Mus musculus} PDB: 3im5_A 3im7_A 3qr5_A 3ila_A 3hsm_A | Back alignment and structure |
|---|
| >2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >3nrt_A Putative ryanodine receptor; PSI-2, protein structure initiative, structural genomics, MI center for structural genomics (MCSG); 2.54A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >1xzz_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3 receptor suppressor domain, calcium channe trefoil fold, membrane protein; 1.80A {Mus musculus} PDB: 3jrr_A | Back alignment and structure |
|---|
| >3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens} | Back alignment and structure |
|---|
| >2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >1t9f_A Protein 1D10; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Caenorhabditis elegans} SCOP: b.42.6.1 | Back alignment and structure |
|---|
| >2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A | Back alignment and structure |
|---|
| >3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A | Back alignment and structure |
|---|
| >2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22 | Back alignment and structure |
|---|
| >3mal_A Stromal cell-derived factor 2-like protein; trefoil fold, MIR motifs, unfolded protein response, putativ binding protein, plant protein; 1.95A {Arabidopsis thaliana} SCOP: b.42.6.0 | Back alignment and structure |
|---|
| >2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A | Back alignment and structure |
|---|
| >3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A | Back alignment and structure |
|---|
| >3uj4_A Inositol 1,4,5-trisphosphate receptor type 1; APO-state, suppressor domain, binding core domain, signaling protein; 3.00A {Rattus norvegicus} PDB: 3uj0_A 3t8s_A* | Back alignment and structure |
|---|
| >2xoa_A Ryanodine receptor 1; metal transport, calcium channel, ION channel, membrane PROT malignant hyperthermia, cardiac arrhythmia; 2.50A {Oryctolagus cuniculus} | Back alignment and structure |
|---|
| >2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22 | Back alignment and structure |
|---|
| >1t9f_A Protein 1D10; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Caenorhabditis elegans} SCOP: b.42.6.1 | Back alignment and structure |
|---|
| >3mal_A Stromal cell-derived factor 2-like protein; trefoil fold, MIR motifs, unfolded protein response, putativ binding protein, plant protein; 1.95A {Arabidopsis thaliana} SCOP: b.42.6.0 | Back alignment and structure |
|---|
| >1n4k_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3-binding core, calcium channel,protein- ligand complex, B-trefoil fold; HET: I3P; 2.20A {Mus musculus} SCOP: a.118.22.1 b.42.6.1 | Back alignment and structure |
|---|
| >2e63_A KIAA1787 protein; structure genomics, neuralized domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A | Back alignment and structure |
|---|
| >1xzz_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3 receptor suppressor domain, calcium channe trefoil fold, membrane protein; 1.80A {Mus musculus} PDB: 3jrr_A | Back alignment and structure |
|---|
| >3uv9_A TRIM5alpha, tripartite motif-containing protein 5; domain SWAP, antiretroviral, HIV capsid, ligase; 1.55A {Macaca mulatta} | Back alignment and structure |
|---|
| >2vok_A 52 kDa RO protein; polymorphism, immune system, metal-binding, tripartite motif (TRIM) protein, SPRY systemic lupus erythematosus, zinc, B30.2; 1.30A {Mus musculus} PDB: 2vol_B* 2iwg_B* | Back alignment and structure |
|---|
| >3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A | Back alignment and structure |
|---|
| >1q1u_A FGF-12, fibrobast growth factor homologous factor 1, FGF12B; human, hormone/growth factor complex; 1.70A {Homo sapiens} SCOP: b.42.1.1 | Back alignment and structure |
|---|
| >2wl1_A Pyrin, marenostrin; amyloidosis, polymorphism, cytoskeleton, actin-binding inflammatory response, metal-binding, signaling protein; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1568 | ||||
| d1n4ka2 | 200 | b.42.6.1 (A:236-435) IP3 receptor type 1 binding c | 1e-27 | |
| d1t9fa_ | 178 | b.42.6.1 (A:) Hypothetical protein R12E2.13 (1D10) | 1e-10 | |
| d2afja1 | 213 | b.29.1.22 (A:12-224) SPRY domain-containing SOCS b | 3e-05 | |
| d2fnja1 | 217 | b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophi | 5e-05 |
| >d1n4ka2 b.42.6.1 (A:236-435) IP3 receptor type 1 binding core, domain 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 200 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: MIR domain family: MIR domain domain: IP3 receptor type 1 binding core, domain 1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 109 bits (274), Expect = 1e-27
Identities = 33/180 (18%), Positives = 68/180 (37%), Gaps = 32/180 (17%)
Query: 123 LICPD--RSKYLFH-IVVYEGGSVMSQARSLWRLELAR-TKWAGGFINWYHPMRIRHLTT 178
L C + + +++F + + + +++LW +E+ + GG W R +HL T
Sbjct: 16 LTCDEHRKKQHVFLRTTGRQSATSATSSKALWEVEVVQHDPCRGGAGYWNSLFRFKHLAT 75
Query: 179 GRYLSTNENNE-----LYLVTRDEATTASSTFCLRQEKDDQKIVLEDK-------DLEVI 226
G YL+ + + L + +S LR ++ L + +
Sbjct: 76 GHYLAAEVDPDFEEECLEFQPSVDPDQDASRSRLRNAQEKMVYSLVSVPEGNDISSIFEL 135
Query: 227 GAPIIKYGD------STVLVQHSENGLWLTYKSY----ETKKKGLGKV------EEKQAV 270
++ GD S V ++H W+ + E +K + K+ E+K+A
Sbjct: 136 DPTTLRGGDSLVPRNSYVRLRHLCTNTWVHSTNIPIDKEEEKPVMLKIGTSPLKEDKEAF 195
|
| >d1t9fa_ b.42.6.1 (A:) Hypothetical protein R12E2.13 (1D10) {Caenorhabditis elegans [TaxId: 6239]} Length = 178 | Back information, alignment and structure |
|---|
| >d2afja1 b.29.1.22 (A:12-224) SPRY domain-containing SOCS box protein 2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 213 | Back information, alignment and structure |
|---|
| >d2fnja1 b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 217 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1568 | |||
| d1n4ka2 | 200 | IP3 receptor type 1 binding core, domain 1 {Mouse | 99.97 | |
| d1n4ka1 | 167 | IP3 receptor type 1 binding core, domain 2 {Mouse | 99.84 | |
| d2fnja1 | 217 | LD34464p {Fruit fly (Drosophila melanogaster) [Tax | 99.51 | |
| d2afja1 | 213 | SPRY domain-containing SOCS box protein 2 {Mouse ( | 99.44 | |
| d1t9fa_ | 178 | Hypothetical protein R12E2.13 (1D10) {Caenorhabdit | 99.33 | |
| d2fnja1 | 217 | LD34464p {Fruit fly (Drosophila melanogaster) [Tax | 99.06 | |
| d2afja1 | 213 | SPRY domain-containing SOCS box protein 2 {Mouse ( | 99.02 | |
| d1t9fa_ | 178 | Hypothetical protein R12E2.13 (1D10) {Caenorhabdit | 97.7 | |
| d2fbea1 | 188 | Similar to Ret finger protein-like 1 {Human (Homo | 92.57 | |
| d1n4ka2 | 200 | IP3 receptor type 1 binding core, domain 1 {Mouse | 90.87 | |
| d2iwgb1 | 179 | 52 kDa Ro protein {Human (Homo sapiens) [TaxId: 96 | 88.18 | |
| d1q1ua_ | 138 | Fibrobast growth factor homologous factor 1 (FHF1b | 87.78 |
| >d1n4ka2 b.42.6.1 (A:236-435) IP3 receptor type 1 binding core, domain 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: MIR domain family: MIR domain domain: IP3 receptor type 1 binding core, domain 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.97 E-value=5.9e-33 Score=298.66 Aligned_cols=167 Identities=23% Similarity=0.396 Sum_probs=95.8
Q ss_pred CcEEEEccCCCC----ccCccccceeEEEEecCcc----ccCCcceEEEeecc-cccCCccceecCceEEEEcCCCceee
Q psy13309 113 TNVSLYLHPGLI----CPDRSKYLFHIVVYEGGSV----MSQARSLWRLELAR-TKWAGGFINWYHPMRIRHLTTGRYLS 183 (1568)
Q Consensus 113 GDVVRLfH~E~~----~~~~~~~~~~v~~~e~g~~----~tsa~sLWeIE~~~-~~~~GG~v~Wgq~fRLRHLtTG~YLa 183 (1568)
||||||||+|++ ++++.+ +.+++++.+++. ++||+||||||+++ .+|+||+++||++||||||+||+||+
T Consensus 2 GDVVRLfH~E~e~~LT~d~~~~-~~~v~lr~~~~~s~~~atss~sLW~IE~v~~d~~~GG~~~W~~~fRlKHLaTG~YLa 80 (200)
T d1n4ka2 2 GDVVRLFHAEQEKFLTCDEHRK-KQHVFLRTTGRQSATSATSSKALWEVEVVQHDPCRGGAGYWNSLFRFKHLATGHYLA 80 (200)
T ss_dssp CCEEEEEETTTTEEEEEEECSS-SEEEEEECCCSSSGGGCCCGGGCEEEEECC-------------CEEEEETTTCCEEE
T ss_pred CCEEEEeecccceeEecccccc-ccceeeeeccccccccccCceeeEEEEEcccccccCccceeCCceEeeEcccCceeE
Confidence 899999999987 343333 556778777654 68999999999998 59999999999999999999999999
Q ss_pred eeecC-----ccccccccccCCCCcceEeecccccccc----ccccccccc---cCCcceeeCC------cEEEEEEccc
Q psy13309 184 TNENN-----ELYLVTRDEATTASSTFCLRQEKDDQKI----VLEDKDLEV---IGAPIIKYGD------STVLVQHSEN 245 (1568)
Q Consensus 184 v~~d~-----~l~l~~~~~a~~~~T~F~f~~~ke~~~~----v~~~~di~~---m~~~~I~~gd------SyvrIqH~~T 245 (1568)
++++. .+.+.+.++++.+++.|+|+.++++... +++..+++. +++++++++| |||||||++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~d~~siF~l~ptt~~~~d~~V~~~Syvrl~Hv~T 160 (200)
T d1n4ka2 81 AEVDPDFEEECLEFQPSVDPDQDASRSRLRNAQEKMVYSLVSVPEGNDISSIFELDPTTLRGGDSLVPRNSYVRLRHLCT 160 (200)
T ss_dssp EEEC-------------------------------CCEEEEEESCSCSGGGCEEEEC--------------CBEEEEGGG
T ss_pred EeecccccccccccccccccccccchhhhhcccccceeeEEecCCCCCchheEeecccccccCceecccCcEEEEEEecC
Confidence 99864 2445566778889999999998877543 345556553 5777788876 8899999999
Q ss_pred CeeeEeeecccccccCChhhhhceEecccccc---ccccceecc
Q psy13309 246 GLWLTYKSYETKKKGLGKVEEKQAVLHEEGKM---DDGLDFSRS 286 (1568)
Q Consensus 246 g~WL~~~~~~~~~~~~~~~e~~k~il~~~g~~---dD~f~~~~v 286 (1568)
|+|||+++++. |+. +.+|+|++.|.. +|+.+|+-+
T Consensus 161 ~~Wl~~t~~~~-----d~~-~~kp~~~~~~~~~~~edkeafa~~ 198 (200)
T d1n4ka2 161 NTWVHSTNIPI-----DKE-EEKPVMLKIGTSPLKEDKEAFAIV 198 (200)
T ss_dssp TEEEEEEEEES-----CCS-SSSCCEEEEEEESSCCSSCCEEEE
T ss_pred CcEEEeecccc-----ccc-ccCceEEEEcccccccchheeeec
Confidence 99999998775 343 447898887654 888888754
|
| >d1n4ka1 a.118.22.1 (A:436-602) IP3 receptor type 1 binding core, domain 2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2fnja1 b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d2afja1 b.29.1.22 (A:12-224) SPRY domain-containing SOCS box protein 2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1t9fa_ b.42.6.1 (A:) Hypothetical protein R12E2.13 (1D10) {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
| >d2fnja1 b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d2afja1 b.29.1.22 (A:12-224) SPRY domain-containing SOCS box protein 2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1t9fa_ b.42.6.1 (A:) Hypothetical protein R12E2.13 (1D10) {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
| >d2fbea1 b.29.1.22 (A:1-188) Similar to Ret finger protein-like 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1n4ka2 b.42.6.1 (A:236-435) IP3 receptor type 1 binding core, domain 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2iwgb1 b.29.1.22 (B:4-182) 52 kDa Ro protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1q1ua_ b.42.1.1 (A:) Fibrobast growth factor homologous factor 1 (FHF1b, FGF12b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|