Psyllid ID: psy13404

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------
Protein Sequence
MPTSPRTPQTPSDFSPIPPTPSDIDVPTPSAIDVDEEAPFENEENFNDGDSDIIGAGSPLRVEDEDEGSGEELFGDNLENDYRPMPALDRYDHDQLDDSDYSVISADARAEAERALRRRDREQAMGGRRGDADLLYESDEDEEAPRRKRRAAERAAEGDLGDEEINK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccHHHccccHHccccHHHHcccccHHcccccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccHHccccccccccHHHHHHHHHHHHcccccHHHccc
Coil and Loop (DISEMBL)
mptsprtpqtpsdfspipptpsdidvptpsaidvdeeapfeneenfndgdsdiigagsplrvededegsgeelfgdnlendyrpmpaldrydhdqlddsdysvISADARAEAERALRRRDReqamggrrgdadllyesdedeeaPRRKRRAAEraaegdlgdeeink
Flexible Loop (DISEMBL)
mptsprtpqtpsdfspipptpsdiDVPTPSAIDVDEEAPFEneenfndgdsdiiGAGSPLRVEDEDEGSGEELFGDNLENDYRPMPALDRYDHDQLDDSDYSVISADARAEAERAlrrrdreqamggrrgdadllyesdedeeaprrKRRAaeraaegdlgdeeink
Low Complexity Region (SEG)
MPTSPRTPQTPSDFSPIPPTPSDIDVPTPSAIDVDEEAPfeneenfnDGDSDIIGAGSPLRVEDEDEGSGEELFGDNLENDYRPMPALDRYDHDQLDDSDYSVISadaraeaeralrrrdreqaMGGRRGDADLLYESdedeeaprrkrraaeraaegdlgdeeINK
Disordered region (IsUnstruct)
***********************************************************************************************************************************************************************
Disordered Region (DISOPRED)
********************************************************************SGEELFGDNLENDYRPMPALDRYDHDQLDDSDYSVISADARAE********************************************************
Disordered Region (DISEMBL)
**************SPIPPTPSDIDVPTPSAIDVDEEAPFENEENFNDGDSDIIGAGSPL***********ELFGDNLENDYRPMPALDRYDHDQLDDSDYSVISADARAEAERALRRRD********RGDADLLYES*****************************
Disordered Region (DISPRO)
*******************************************************************GSGEELFGDNLENDYRPMPALDRYDHDQLDDSDYSVISADARAEAERALRRRDREQAMG*****************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPTSPRTPQTPSDFSPIPPTPSDIDVPTPSAIDVDEEAPFENEENFNDGDSDIIGAGSPLRVEDEDEGSGEELFGDNLENDYRPMPALDRYDHDQLDDSDYSVISADARAEAERALRRRDREQAMGGRRGDADLLYESDEDEEAPRRKRRAAERAAEGDLGDEEINK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	167	2.2.26 [Sep-21-2011]
P49735	887	DNA replication licensing	yes	N/A	0.544	0.102	0.541	3e-15
P55861	886	DNA replication licensing	N/A	N/A	0.514	0.097	0.522	1e-12
P97310	904	DNA replication licensing	yes	N/A	0.556	0.102	0.5	1e-10
P49736	904	DNA replication licensing	yes	N/A	0.550	0.101	0.505	3e-10
Q6DIH3	884	DNA replication licensing	yes	N/A	0.514	0.097	0.5	2e-09

>sp|P49735|MCM2_DROME DNA replication licensing factor Mcm2 OS=Drosophila melanogaster GN=Mcm2 PE=1 SV=1

 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/96 (54%), Positives = 62/96 (64%), Gaps = 5/96 (5%)

Query: 73  LFGDNLENDYRPMPALDRYDHDQLDDS-DYSVISADARAEAERALRRRDREQAMGGRRGD 131
           LFGDN+ENDYRPMP LD YD   LDD  D+S +S   R  AE  +RRRDR  A G  R D
Sbjct: 59  LFGDNMENDYRPMPELDHYDPALLDDEDDFSEMSQGDRFAAESEMRRRDR--AAGIHRDD 116

Query: 132 ADLLY--ESDEDEEAPRRKRRAAERAAEGDLGDEEI 165
            DL +    DED+  PR KRRA E+AA G++ D E+
Sbjct: 117 RDLGFGQSDDEDDVGPRAKRRAGEKAAVGEVEDTEM 152

Acts as component of the Mcm2-7 complex (Mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the Mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity. Required for DNA replication and cell proliferation.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 6EC: .EC: 4EC: .EC: 1EC: 2

>sp|P55861|MCM2_XENLA DNA replication licensing factor mcm2 OS=Xenopus laevis GN=mcm2 PE=1 SV=2

 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/88 (52%), Positives = 57/88 (64%), Gaps = 2/88 (2%)

Query: 73  LFGDNLENDYRPMPALDRYDHDQLDD-SDYSVISADARAEAERALRRRDREQAMGGRRGD 131
           L GD +E DYRP+  LDRY+ + LDD  D   ++A  R  AE+++R RDRE      R  
Sbjct: 57  LIGDAMERDYRPISELDRYEVEGLDDEEDVEDLTASQREAAEQSMRMRDREMGRELGRMR 116

Query: 132 ADLLYESDEDEE-APRRKRRAAERAAEG 158
             LLY+SDE+EE  P RKRR AERAAEG
Sbjct: 117 RGLLYDSDEEEEDRPARKRRMAERAAEG 144

Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity. Required for the entry in S phase and for cell division.

Xenopus laevis (taxid: 8355)

EC: 3

EC: .

EC: 6

EC: .

EC: 4

EC: .

EC: 1

EC: 2

>sp|P97310|MCM2_MOUSE DNA replication licensing factor MCM2 OS=Mus musculus GN=Mcm2 PE=1 SV=3

 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 59/96 (61%), Gaps = 3/96 (3%)

Query: 73  LFGDNLENDYRPMPALDRYDHD--QLDDSDYSVISADARAEAERALRRRDREQAMGGRRG 130
           L GD +E DYRP+P LD Y+ +   LDD D   ++A  R  AER +R+RDRE   G  R 
Sbjct: 72  LIGDGMERDYRPIPELDVYEAEGLALDDEDVEELTASQREAAERTMRQRDREAGRGLGRM 131

Query: 131 DADLLYE-SDEDEEAPRRKRRAAERAAEGDLGDEEI 165
              LLY+ S+EDEE P RKRR  ERA E    DEE+
Sbjct: 132 RRGLLYDSSEEDEERPARKRRHVERATEDGEEDEEM 167

Acts as component of the MCM2-7 complex (MCM complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity. Required for the entry in S phase and for cell division.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 6

EC: .

EC: 4

EC: .

EC: 1

EC: 2

>sp|P49736|MCM2_HUMAN DNA replication licensing factor MCM2 OS=Homo sapiens GN=MCM2 PE=1 SV=4

 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/95 (50%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 74  FGDNLENDYRPMPALDRYDHD--QLDDSDYSVISADARAEAERALRRRDREQAMGGRRGD 131
            GD +E DYR +P LD Y+ +   LDD D   ++A  R  AERA+R+RDRE   G  R  
Sbjct: 73  IGDGMERDYRAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQRDREAGRGLGRMR 132

Query: 132 ADLLYESD-EDEEAPRRKRRAAERAAEGDLGDEEI 165
             LLY+SD EDEE P RKRR  ERA E    DEE+
Sbjct: 133 RGLLYDSDEEDEERPARKRRQVERATEDGEEDEEM 167

Acts as component of the MCM2-7 complex (MCM complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity. Required for the entry in S phase and for cell division.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 6

EC: .

EC: 4

EC: .

EC: 1

EC: 2

>sp|Q6DIH3|MCM2_XENTR DNA replication licensing factor mcm2 OS=Xenopus tropicalis GN=mcm2 PE=2 SV=1

 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/88 (50%), Positives = 55/88 (62%), Gaps = 2/88 (2%)

Query: 73  LFGDNLENDYRPMPALDRYDHD-QLDDSDYSVISADARAEAERALRRRDREQAMGGRRGD 131
           L GD +E DYR +  LDRY+ +   D+ D   ++A  R  AE+A+R RDRE      R  
Sbjct: 57  LIGDAMERDYRAISELDRYEAEGLDDEDDVEDLTASQRDAAEQAMRMRDREMGHELGRMR 116

Query: 132 ADLLYESD-EDEEAPRRKRRAAERAAEG 158
             LLY+SD EDE+ P RKRR AERAAEG
Sbjct: 117 RGLLYDSDEEDEDRPARKRRMAERAAEG 144

Acts as component of the MCM2-7 complex (MCM complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity.

Xenopus tropicalis (taxid: 8364)

EC: 3

EC: .

EC: 6

EC: .

EC: 4

EC: .

EC: 1

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
332017139	893	DNA replication licensing factor Mcm2 [A	0.832	0.155	0.457	3e-20
345488657	879	PREDICTED: DNA replication licensing fac	0.784	0.149	0.454	4e-20
383865959	1018	PREDICTED: DNA replication licensing fac	0.712	0.116	0.518	1e-19
193712527	888	PREDICTED: DNA replication licensing fac	0.520	0.097	0.613	1e-19
328779765	875	PREDICTED: DNA replication licensing fac	0.724	0.138	0.496	8e-18
321465825	902	putative MCM2, Minichromosome maintenanc	0.497	0.092	0.602	2e-17
350422790	924	PREDICTED: DNA replication licensing fac	0.724	0.130	0.488	2e-17
307211082	862	DNA replication licensing factor Mcm2 [H	0.718	0.139	0.496	1e-16
195390725	885	GJ24206 [Drosophila virilis] gi|19415210	0.688	0.129	0.5	2e-16
380011223	875	PREDICTED: DNA replication licensing fac	0.724	0.138	0.496	8e-16

>gi|332017139|gb|EGI57938.1| DNA replication licensing factor Mcm2 [Acromyrmex echinatior]

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/164 (45%), Positives = 97/164 (59%), Gaps = 25/164 (15%)

Query: 2   PTSPRTPQTPSDFSPIPPTPSDIDVPTPSAIDVDEEAPFENEENFNDGDSDIIGAGSPLR 61
           P+SP   +  +D  PI    S    P P   D+DE  PFE+E +  DGD+          
Sbjct: 15  PSSPIHSERHTD--PISQQTS----PAP---DIDE--PFEDESDLLDGDN---------- 53

Query: 62  VEDEDEGSGEELFGDNLENDYRPMPALDRYDHDQLDDSDYSVISADARAEAERALRRRDR 121
           V++E+EG  EELFGDN+E DYRPM  LDRYD + LDD +YS +S   R  AE  +R+RDR
Sbjct: 54  VDNEEEG--EELFGDNMEADYRPMSGLDRYDPNLLDDEEYSEMSQGERLAAETEMRKRDR 111

Query: 122 EQAMGGRRGDADLLYESDEDEEAPRRKRRAAERAAEGDLGDEEI 165
             A G  R D DLLY+  ++E+   RKRR AE+AA G L D E+
Sbjct: 112 --AAGIIRDDRDLLYDETDEEDVQARKRRMAEKAATGILEDAEM 153

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345488657|ref|XP_001603896.2| PREDICTED: DNA replication licensing factor Mcm2-like [Nasonia vitripennis]

 Score =  102 bits (255), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/154 (45%), Positives = 88/154 (57%), Gaps = 23/154 (14%)

Query: 16  PIPPTPSD----IDVPTPSAIDVDEEAPFENEENFNDGDSDIIGAGSPLRVEDEDEGSGE 71
           P  P PSD    +  P P   D      FE+E       SD++          EDE  GE
Sbjct: 4   PSSPAPSDRHDAMTSPAPDFYD-----QFEDESRLIGNVSDVV----------EDEVDGE 48

Query: 72  ELFGDNLENDYRPMPALDRYDHDQLDDSDYSVISADARAEAERALRRRDREQAMGGRRGD 131
           ELFGDN+E DYRPM ALDRYD + +DD DYS +S   RA AE ++R+RDR     G R D
Sbjct: 49  ELFGDNMEADYRPMSALDRYDPNMVDDEDYSEMSQGERAAAEASMRKRDRA---AGIRDD 105

Query: 132 ADLLYESDEDEEAPRRKRRAAERAAEGDLGDEEI 165
            DLLY+  +DE+   RKRR AE+AA G++ D E+
Sbjct: 106 KDLLYDESDDEDMT-RKRRLAEKAATGEIEDTEM 138

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383865959|ref|XP_003708439.1| PREDICTED: DNA replication licensing factor Mcm2-like [Megachile rotundata]

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/133 (51%), Positives = 90/133 (67%), Gaps = 14/133 (10%)

Query: 33  DVDEEAPFENEENFNDGDSDIIGAGSPLRVEDEDEGSGEELFGDNLENDYRPMPALDRYD 92
           ++DE  PFENE       +D++G  + LR   E+E  GEELFGDN+E+DYRPMPALDRYD
Sbjct: 166 EIDE--PFENE-------ADLLGTDNDLR---EEEEEGEELFGDNMEDDYRPMPALDRYD 213

Query: 93  HDQLDDSDYSVISADARAEAERALRRRDREQAMGGRRGDADLLYESDEDEEAPRRKRRAA 152
            D +DD +YS +S   RA AE A+R+RDR  A G  R D  LLY+  ++EE   RKRR A
Sbjct: 214 PDVVDDEEYSELSQGERAAAESAMRKRDR--AAGIIRDDRYLLYDESDEEEIQARKRRMA 271

Query: 153 ERAAEGDLGDEEI 165
           E+AA G++ D E+
Sbjct: 272 EKAATGEIEDVEM 284

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193712527|ref|XP_001944886.1| PREDICTED: DNA replication licensing factor Mcm2-like [Acyrthosiphon pisum]

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/88 (61%), Positives = 66/88 (75%), Gaps = 1/88 (1%)

Query: 73  LFGDNLENDYRPMPALDRYDHDQLDDSDYSVISADARAEAERALRRRDREQAMGGRRGDA 132
           LFGDNLE DYRP+PALDRYD  +LD+ DY  +S  ARA AER L+RRDRE+  G R  D 
Sbjct: 58  LFGDNLERDYRPIPALDRYDGGELDEDDYDYMSPGARAAAERELQRRDREEGTGRRDAD- 116

Query: 133 DLLYESDEDEEAPRRKRRAAERAAEGDL 160
           D+LY+  +D+EA R+KRR AERAA G +
Sbjct: 117 DILYDEHDDDEASRKKRRMAERAATGFI 144

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328779765|ref|XP_395109.3| PREDICTED: DNA replication licensing factor Mcm2-like [Apis mellifera]

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/133 (49%), Positives = 86/133 (64%), Gaps = 12/133 (9%)

Query: 33  DVDEEAPFENEENFNDGDSDIIGAGSPLRVEDEDEGSGEELFGDNLENDYRPMPALDRYD 92
           ++DE  PFE+E +    D+D+         ++E+E  GEELFGDN+E DYRPMP LDRYD
Sbjct: 21  EIDE--PFEDESDLLGNDNDV--------NQEEEEEEGEELFGDNMEADYRPMPELDRYD 70

Query: 93  HDQLDDSDYSVISADARAEAERALRRRDREQAMGGRRGDADLLYESDEDEEAPRRKRRAA 152
            D LDD DYS +S   RA AE A+ +RDR  A G  R D  LLY+  ++EE   RKRR A
Sbjct: 71  PDVLDDEDYSEMSQGERAAAEAAMHKRDR--AAGIIRDDRYLLYDESDEEEMQARKRRMA 128

Query: 153 ERAAEGDLGDEEI 165
           E+AA G++ D E+
Sbjct: 129 EKAAIGEIEDTEM 141

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321465825|gb|EFX76824.1| putative MCM2, Minichromosome maintenance complex component 2 [Daphnia pulex]

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/88 (60%), Positives = 66/88 (75%), Gaps = 5/88 (5%)

Query: 73  LFGDNLENDYRPMPALDRYDHDQLDDSDYSVISADARAEAERALRRRDREQAMG-GRRGD 131
           LFGDN+E DYR +PALDRYD  +LD+SDY  IS   R EAERA+R+RD++  +G  RRG 
Sbjct: 78  LFGDNMEADYRAIPALDRYDGGELDESDYDAISESGRREAERAMRKRDQDMGVGDMRRG- 136

Query: 132 ADLLYESDEDEEA-PRRKRRAAERAAEG 158
             L Y +D+D+E+ P RKRR AERAAEG
Sbjct: 137 --LFYGNDDDDESRPARKRRLAERAAEG 162

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350422790|ref|XP_003493283.1| PREDICTED: DNA replication licensing factor Mcm2-like [Bombus impatiens]

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/133 (48%), Positives = 86/133 (64%), Gaps = 12/133 (9%)

Query: 33  DVDEEAPFENEENFNDGDSDIIGAGSPLRVEDEDEGSGEELFGDNLENDYRPMPALDRYD 92
           ++DE  PFE+E +    D+D+         ++E+E  GEELFGDN+E DYRPMPALDRYD
Sbjct: 70  EIDE--PFEDEADLLGNDNDV--------NQEEEEEEGEELFGDNMEADYRPMPALDRYD 119

Query: 93  HDQLDDSDYSVISADARAEAERALRRRDREQAMGGRRGDADLLYESDEDEEAPRRKRRAA 152
            D +DD +YS +S   RA AE  + +RDR  A G  R D  LLY+  ++EE   RKRR A
Sbjct: 120 PDVVDDEEYSEMSQGERAVAEAIMLKRDR--AAGIIRDDRYLLYDESDEEETHARKRRMA 177

Query: 153 ERAAEGDLGDEEI 165
           E+AA GD+ D E+
Sbjct: 178 EKAAVGDIEDTEM 190

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307211082|gb|EFN87325.1| DNA replication licensing factor Mcm2 [Harpegnathos saltator]

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/133 (49%), Positives = 85/133 (63%), Gaps = 13/133 (9%)

Query: 33  DVDEEAPFENEENFNDGDSDIIGAGSPLRVEDEDEGSGEELFGDNLENDYRPMPALDRYD 92
           D+DE  PFENE +  DG+++           +E+E  GEELFGDN+E DYRPM ALDRYD
Sbjct: 7   DIDE--PFENESDLLDGENE---------HNNEEEEEGEELFGDNMEADYRPMSALDRYD 55

Query: 93  HDQLDDSDYSVISADARAEAERALRRRDREQAMGGRRGDADLLYESDEDEEAPRRKRRAA 152
            + LDD +YS IS   R  AE  +R+RDR  A G  R D DLLY+  ++E+   RKRR A
Sbjct: 56  PNLLDDEEYSDISQGERVAAETEMRKRDR--AAGIIRDDRDLLYDETDEEDVQARKRRMA 113

Query: 153 ERAAEGDLGDEEI 165
           E+AA G + D E+
Sbjct: 114 EKAAAGIIEDAEM 126

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195390725|ref|XP_002054018.1| GJ24206 [Drosophila virilis] gi|194152104|gb|EDW67538.1| GJ24206 [Drosophila virilis]

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/130 (50%), Positives = 79/130 (60%), Gaps = 15/130 (11%)

Query: 39  PFENEENFNDGDSDIIGAGSPLRVEDEDEGSGEELFGDNLENDYRPMPALDRYDHDQLDD 98
           PFENE+       +I+G  +    EDED   GEELFGDN+ENDYR MP LD YD   LDD
Sbjct: 34  PFENED-------EILGDQTVRNEEDED---GEELFGDNMENDYREMPELDHYDPAMLDD 83

Query: 99  -SDYSVISADARAEAERALRRRDREQAMGGRRGDADLLY--ESDEDEEAPRRKRRAAERA 155
             D+S +S   R  AE  +RRRDR  A G  R D DL +    DED+  PR KRRA E+A
Sbjct: 84  EEDFSEMSQGERFAAESEMRRRDR--AAGIHRDDRDLGFGQSDDEDDVGPRAKRRAGEKA 141

Query: 156 AEGDLGDEEI 165
           A G++ D E+
Sbjct: 142 AVGEVEDTEM 151

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380011223|ref|XP_003689710.1| PREDICTED: DNA replication licensing factor Mcm2-like [Apis florea]

 Score = 88.6 bits (218), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 66/133 (49%), Positives = 87/133 (65%), Gaps = 12/133 (9%)

Query: 33  DVDEEAPFENEENFNDGDSDIIGAGSPLRVEDEDEGSGEELFGDNLENDYRPMPALDRYD 92
           ++DE  PFE+E +    D+D+         ++E+E  GEELFGDN+E DYRPMP LDRYD
Sbjct: 21  EIDE--PFEDESDLLGNDNDV--------NQEEEEEEGEELFGDNMEADYRPMPELDRYD 70

Query: 93  HDQLDDSDYSVISADARAEAERALRRRDREQAMGGRRGDADLLYESDEDEEAPRRKRRAA 152
            D +DD DYS +S   RA AE A+R+RDR  A G  R D  LLY+  ++EE   RKRR A
Sbjct: 71  PDVVDDEDYSEMSQGERAAAEAAMRKRDR--AAGIIRDDRYLLYDESDEEEMQARKRRIA 128

Query: 153 ERAAEGDLGDEEI 165
           E+AA G++ D E+
Sbjct: 129 EKAAIGEIEDTEM 141

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
FB|FBgn0014861	887	Mcm2 "Minichromosome maintenan	0.491	0.092	0.437	7.2e-10
WB|WBGene00003154	881	mcm-2 [Caenorhabditis elegans	0.347	0.065	0.442	7e-07
ZFIN|ZDB-GENE-020419-24	889	mcm2 "MCM2 minichromosome main	0.443	0.083	0.402	9e-07
UNIPROTKB|C9J013	103	MCM2 "DNA replication licensin	0.538	0.873	0.333	1.6e-06
UNIPROTKB|C9JZ21	128	MCM2 "DNA replication licensin	0.538	0.703	0.333	1.6e-06
UNIPROTKB|F8WDM3	146	MCM2 "DNA replication licensin	0.538	0.616	0.333	1.6e-06
UNIPROTKB|F1SPF3	903	MCM2 "Uncharacterized protein"	0.526	0.097	0.333	4e-06
UNIPROTKB|J9P937	933	MCM2 "Uncharacterized protein"	0.526	0.094	0.333	4.2e-06
MGI|MGI:105380	904	Mcm2 "minichromosome maintenan	0.520	0.096	0.333	5.2e-06
RGD|1305577	907	Mcm2 "minichromosome maintenan	0.520	0.095	0.333	5.2e-06

FB|FBgn0014861 Mcm2 "Minichromosome maintenance 2" [Drosophila melanogaster (taxid:7227)]

 Score = 154 (59.3 bits), Expect = 7.2e-10, P = 7.2e-10
 Identities = 42/96 (43%), Positives = 53/96 (55%)

Query:    15 SPIPPTPSDI----DVPTPSAIDVDEEAPXXXXXXXXDGDSDIIGAGSPLRVEDEDEGSG 70
             SP P TPSD     D+       V +  P        + + +I+G    +R E E+E  G
Sbjct:     6 SPPPNTPSDAAERRDLRAAMTSPVGDFEPF-------ENEDEILG-DQTVRDEAEEE-DG 56

Query:    71 EELFGDNLENDYRPMPALDRYDHDQLDDSD-YSVIS 105
             EELFGDN+ENDYRPMP LD YD   LDD D +S +S
Sbjct:    57 EELFGDNMENDYRPMPELDHYDPALLDDEDDFSEMS 92

GO:0006267 "pre-replicative complex assembly" evidence=ISS;NAS

GO:0003682 "chromatin binding" evidence=ISS;NAS

GO:0005656 "pre-replicative complex" evidence=ISS;NAS

GO:0008283 "cell proliferation" evidence=NAS

GO:0005634 "nucleus" evidence=NAS

GO:0003677 "DNA binding" evidence=IEA;NAS

GO:0006260 "DNA replication" evidence=NAS;TAS

GO:0030261 "chromosome condensation" evidence=IMP

GO:0006270 "DNA replication initiation" evidence=IEA

GO:0042555 "MCM complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0043138 "3'-5' DNA helicase activity" evidence=IDA

GO:0022008 "neurogenesis" evidence=IMP

GO:0046331 "lateral inhibition" evidence=IMP

WB|WBGene00003154 mcm-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 126 (49.4 bits), Expect = 7.0e-07, P = 7.0e-07
 Identities = 27/61 (44%), Positives = 34/61 (55%)

Query:    48 DGDSDIIGAGSPLRVEDED--EGSGEELFGDNLENDYRPMPALDRYDHDQLDD-SDYSVI 104
             D D D+ G       EDED  +  GE LFGD++E DYR  P LD+Y    +DD SD   +
Sbjct:    21 DADDDVDGIDEMFNNEDEDPEDEEGENLFGDDMERDYREQPELDQYSESGMDDASDVGSL 80

Query:   105 S 105
             S
Sbjct:    81 S 81

GO:0005634 "nucleus" evidence=IEA;IDA

GO:0016851 "magnesium chelatase activity" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006260 "DNA replication" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0006270 "DNA replication initiation" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0045120 "pronucleus" evidence=IDA

GO:0000793 "condensed chromosome" evidence=IDA

GO:0042555 "MCM complex" evidence=ISS

ZFIN|ZDB-GENE-020419-24 mcm2 "MCM2 minichromosome maintenance deficient 2, mitotin (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 125 (49.1 bits), Expect = 9.0e-07, P = 9.0e-07
 Identities = 31/77 (40%), Positives = 40/77 (51%)

Query:    64 DEDEGSGEELFGDNLENDYRPMPALDRYDHDQLD-DSDYSVISXXXXXXXXXXXXXXXXX 122
             DE++  GEEL GD +E DYR +P LDRY+ + LD D D S +S                 
Sbjct:    48 DEEDDDGEELIGDAMERDYRVIPELDRYEAEGLDEDEDLSELSPSARAEAEAAMRRRDRE 107

Query:   123 XXMG-GRRGDADLLYES 138
               +G GR G   LLY+S
Sbjct:   108 QGLGMGRIGRG-LLYDS 123

GO:0042555 "MCM complex" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006260 "DNA replication" evidence=IEA

GO:0003678 "DNA helicase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006270 "DNA replication initiation" evidence=IEA

GO:0060041 "retina development in camera-type eye" evidence=IMP

GO:0003682 "chromatin binding" evidence=IDA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|C9J013 MCM2 "DNA replication licensing factor MCM2" [Homo sapiens (taxid:9606)]

 Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 34/102 (33%), Positives = 47/102 (46%)

Query:     1 MPTSPRTPQTPSDFSPIPPTPSDIDVPTPSAIDVDEEAPXXXXXXXXDGDSDIIGAGSPL 60
             M +SP   +  +D  P+  +P      T    D    +P        D    ++G   PL
Sbjct:     1 MASSPAQRRRGND--PLTSSPGRSSRRT----DALTSSPGRDLPPFEDESEGLLGTEGPL 54

Query:    61 RVEDEDEGSGEELFGDNLENDYRPMPALDRYDHD--QLDDSD 100
               E+ED   GEEL GD +E DYR +P LD Y+ +   LDD D
Sbjct:    55 E-EEED---GEELIGDGMERDYRAIPELDAYEAEGLALDDED 92

GO:0003678 "DNA helicase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006270 "DNA replication initiation" evidence=IEA

GO:0042555 "MCM complex" evidence=IEA

GO:0003688 "DNA replication origin binding" evidence=IEA

GO:0005664 "nuclear origin of replication recognition complex" evidence=IEA

GO:0006268 "DNA unwinding involved in replication" evidence=IEA

GO:0006334 "nucleosome assembly" evidence=IEA

GO:0042393 "histone binding" evidence=IEA

UNIPROTKB|C9JZ21 MCM2 "DNA replication licensing factor MCM2" [Homo sapiens (taxid:9606)]

 Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 34/102 (33%), Positives = 47/102 (46%)

Query:     1 MPTSPRTPQTPSDFSPIPPTPSDIDVPTPSAIDVDEEAPXXXXXXXXDGDSDIIGAGSPL 60
             M +SP   +  +D  P+  +P      T    D    +P        D    ++G   PL
Sbjct:     1 MASSPAQRRRGND--PLTSSPGRSSRRT----DALTSSPGRDLPPFEDESEGLLGTEGPL 54

Query:    61 RVEDEDEGSGEELFGDNLENDYRPMPALDRYDHD--QLDDSD 100
               E+ED   GEEL GD +E DYR +P LD Y+ +   LDD D
Sbjct:    55 E-EEED---GEELIGDGMERDYRAIPELDAYEAEGLALDDED 92

GO:0003678 "DNA helicase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006270 "DNA replication initiation" evidence=IEA

GO:0042555 "MCM complex" evidence=IEA

GO:0003688 "DNA replication origin binding" evidence=IEA

GO:0005664 "nuclear origin of replication recognition complex" evidence=IEA

GO:0006268 "DNA unwinding involved in replication" evidence=IEA

GO:0006334 "nucleosome assembly" evidence=IEA

GO:0042393 "histone binding" evidence=IEA

UNIPROTKB|F8WDM3 MCM2 "DNA replication licensing factor MCM2" [Homo sapiens (taxid:9606)]

 Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 34/102 (33%), Positives = 47/102 (46%)

Query:     1 MPTSPRTPQTPSDFSPIPPTPSDIDVPTPSAIDVDEEAPXXXXXXXXDGDSDIIGAGSPL 60
             M +SP   +  +D  P+  +P      T    D    +P        D    ++G   PL
Sbjct:    10 MASSPAQRRRGND--PLTSSPGRSSRRT----DALTSSPGRDLPPFEDESEGLLGTEGPL 63

Query:    61 RVEDEDEGSGEELFGDNLENDYRPMPALDRYDHD--QLDDSD 100
               E+ED   GEEL GD +E DYR +P LD Y+ +   LDD D
Sbjct:    64 E-EEED---GEELIGDGMERDYRAIPELDAYEAEGLALDDED 101

GO:0003677 "DNA binding" evidence=IEA

GO:0003678 "DNA helicase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006270 "DNA replication initiation" evidence=IEA

GO:0042555 "MCM complex" evidence=IEA

UNIPROTKB|F1SPF3 MCM2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 119 (46.9 bits), Expect = 4.0e-06, P = 4.0e-06
 Identities = 31/93 (33%), Positives = 41/93 (44%)

Query:    48 DGDSDIIGAGSPLRVEDEDEGSGEELFGDNLENDYRPMPALDRYDHD--QLDDSDYSVIS 105
             D    ++G   PL  E+ED   GEEL GD +E DYR +P LD Y+ +   LDD D   ++
Sbjct:    51 DESEGLLGTEGPLEEEEED---GEELIGDGMERDYRAIPELDVYEPEGLALDDEDVEELT 107

Query:   106 XXXXXXXXXXXXXXXXXXXMGGRRGDADLLYES 138
                                 G  R    LLY+S
Sbjct:   108 ASQREAAERAMRQRDREAGRGLGRMRRGLLYDS 140

GO:0042555 "MCM complex" evidence=IEA

GO:0042393 "histone binding" evidence=IEA

GO:0006334 "nucleosome assembly" evidence=IEA

GO:0006268 "DNA unwinding involved in replication" evidence=IEA

GO:0005664 "nuclear origin of replication recognition complex" evidence=IEA

GO:0003688 "DNA replication origin binding" evidence=IEA

GO:0000785 "chromatin" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006270 "DNA replication initiation" evidence=IEA

GO:0003678 "DNA helicase activity" evidence=IEA

UNIPROTKB|J9P937 MCM2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 119 (46.9 bits), Expect = 4.2e-06, P = 4.2e-06
 Identities = 31/93 (33%), Positives = 41/93 (44%)

Query:    48 DGDSDIIGAGSPLRVEDEDEGSGEELFGDNLENDYRPMPALDRYDHD--QLDDSDYSVIS 105
             D    ++G   PL   DE+E  GEEL GD +E DYR +P LD Y+ +   LDD D   ++
Sbjct:    80 DESEGLLGTEGPL---DEEEEDGEELIGDGMERDYRAIPELDVYEAEGLALDDEDVEELT 136

Query:   106 XXXXXXXXXXXXXXXXXXXMGGRRGDADLLYES 138
                                 G  R    LLY+S
Sbjct:   137 ASQREAAERAMRQRDREAGRGLGRMRRGLLYDS 169

GO:0005524 "ATP binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0042555 "MCM complex" evidence=IEA

GO:0006270 "DNA replication initiation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003678 "DNA helicase activity" evidence=IEA

MGI|MGI:105380 Mcm2 "minichromosome maintenance deficient 2 mitotin (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 118 (46.6 bits), Expect = 5.2e-06, P = 5.2e-06
 Identities = 31/93 (33%), Positives = 42/93 (45%)

Query:    48 DGDSDIIGAGSPLRVEDEDEGSGEELFGDNLENDYRPMPALDRYDHD--QLDDSDYSVIS 105
             D    ++G   P+  E+ED   GEEL GD +E DYRP+P LD Y+ +   LDD D   ++
Sbjct:    51 DESEGLLGTEGPME-EEED---GEELIGDGMERDYRPIPELDVYEAEGLALDDEDVEELT 106

Query:   106 XXXXXXXXXXXXXXXXXXXMGGRRGDADLLYES 138
                                 G  R    LLY+S
Sbjct:   107 ASQREAAERTMRQRDREAGRGLGRMRRGLLYDS 139

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000785 "chromatin" evidence=ISO

GO:0003677 "DNA binding" evidence=IEA

GO:0003678 "DNA helicase activity" evidence=IEA

GO:0003688 "DNA replication origin binding" evidence=IDA

GO:0004386 "helicase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005664 "nuclear origin of replication recognition complex" evidence=IDA

GO:0006260 "DNA replication" evidence=IEA

GO:0006268 "DNA unwinding involved in replication" evidence=IDA

GO:0006270 "DNA replication initiation" evidence=ISO;TAS

GO:0006334 "nucleosome assembly" evidence=IDA

GO:0007049 "cell cycle" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0042393 "histone binding" evidence=IDA

GO:0042555 "MCM complex" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0071353 "cellular response to interleukin-4" evidence=IDA

RGD|1305577 Mcm2 "minichromosome maintenance complex component 2" [Rattus norvegicus (taxid:10116)]

 Score = 118 (46.6 bits), Expect = 5.2e-06, P = 5.2e-06
 Identities = 31/93 (33%), Positives = 43/93 (46%)

Query:    48 DGDSDIIGAGSPLRVEDEDEGSGEELFGDNLENDYRPMPALDRYDHD--QLDDSDYSVIS 105
             D    ++G   P  VE+E++G  EEL GD +E DYRP+P LD Y+ +   LDD D   ++
Sbjct:    52 DESEGLLGTEGP--VEEEEDG--EELIGDGMERDYRPIPELDVYEAEGLALDDEDVEELT 107

Query:   106 XXXXXXXXXXXXXXXXXXXMGGRRGDADLLYES 138
                                 G  R    LLY+S
Sbjct:   108 ASQREAAERAMRQRDREAGRGLGRMRRGLLYDS 140

GO:0000785 "chromatin" evidence=IEA;ISO

GO:0003678 "DNA helicase activity" evidence=IEA

GO:0003688 "DNA replication origin binding" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005664 "nuclear origin of replication recognition complex" evidence=IEA;ISO

GO:0006268 "DNA unwinding involved in replication" evidence=IEA;ISO

GO:0006270 "DNA replication initiation" evidence=IEA;ISO

GO:0006334 "nucleosome assembly" evidence=IEA;ISO

GO:0042393 "histone binding" evidence=IEA;ISO

GO:0042555 "MCM complex" evidence=IEA;ISO

GO:0071353 "cellular response to interleukin-4" evidence=ISO

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P49736	MCM2_HUMAN	3, ., 6, ., 4, ., 1, 2	0.5052	0.5508	0.1017	yes	N/A
P49735	MCM2_DROME	3, ., 6, ., 4, ., 1, 2	0.5416	0.5449	0.1025	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	167
pfam12619	145	pfam12619, MCM2_N, Mini-chromosome maintenance pro	6e-13

>gnl|CDD|221668 pfam12619, MCM2_N, Mini-chromosome maintenance protein 2

 Score = 62.3 bits (152), Expect = 6e-13
 Identities = 52/130 (40%), Positives = 68/130 (52%), Gaps = 11/130 (8%)

Query: 44  ENFNDGDSDIIGAGSPLRVEDEDEGSGEELFGDNLENDYRPMPALDRYDHDQLDD-SDYS 102
           E+  D + ++      L  E E+E  GE+LFGDN+E DYR  P LDRYD D LDD SDY 
Sbjct: 1   EDEPDEEEELEDDIDDLDEEAEEEEDGEDLFGDNMERDYRANPELDRYDEDGLDDESDYE 60

Query: 103 VISADARAEAERALRRRDREQAMGGRRGDADLLYESDEDEEA-------PRRKRRAAERA 155
            +SA AR  AE  L RRDR      RR       + D+D++        PRR+RR  +  
Sbjct: 61  ELSAAARRAAEARLNRRDRLLR---RRRMPAAFLDDDDDDDGDFDLTAQPRRRRRQYDED 117

Query: 156 AEGDLGDEEI 165
            + D  D + 
Sbjct: 118 RDADDEDIDP 127

This domain family is found in eukaryotes, and is typically between 138 and 153 amino acids in length. The family is found in association with pfam00493. Mini-chromosome maintenance (MCM) proteins are essential for DNA replication. These proteins use ATPase activity to perform this function. Length = 145

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	167
PF12619	156	MCM2_N: Mini-chromosome maintenance protein 2; Int	99.92
KOG0477|consensus	854		99.61

>PF12619 MCM2_N: Mini-chromosome maintenance protein 2; InterPro: IPR008045 The MCM2-7 complex consists of six closely related proteins that are highly conserved throughout the eukaryotic kingdom

Probab=99.92  E-value=2.9e-25  Score=178.08  Aligned_cols=93  Identities=53%  Similarity=0.871  Sum_probs=75.9

Q ss_pred             ccccccccccccchhhccCCCCCCCccCCCCCCC-cccccCCHHHHHHHHHHHHHhHHHHHcCC--CCCCcccccCCC-c
Q psy13404         65 EDEGSGEELFGDNLENDYRPMPALDRYDHDQLDD-SDYSVISADARAEAERALRRRDREQAMGG--RRGDADLLYESD-E  140 (167)
Q Consensus        65 eEEEeGEDLfgDnmE~DYr~~pElD~Yd~~gLDD-~dyeemd~~~RRaaE~~L~rRDr~~~r~~--~R~~~~ll~DdD-d  140 (167)
                      +++++|+||||+||++||+++++||+|+..+||| .+|++|++++||+||++|++||+..++..  +|+.++||++++ +
T Consensus        26 eEEeeGEDLfgDnme~DYr~~~elD~Yd~~~lDDe~dy~~md~~~RraaE~~L~~RDr~~~~~~~~rr~~p~~~~ddddd  105 (156)
T PF12619_consen   26 EEEEEGEDLFGDNMERDYRPNPELDRYDEDGLDDESDYEEMDPAARRAAERELNRRDREEGRRRGRRRRMPAAFLDDDDD  105 (156)
T ss_pred             ccccccchhcccCHHHHhccCcccCccccCCCCchhhcccCCHHHHHHHHHHHHHHHHHHhhhccccccccccccccccc
Confidence            5678999999999999999999999999999998 59999999999999999999999988642  244455555554 3


Q ss_pred             ccc------hHHHHHHHHHHhhc
Q psy13404        141 DEE------APRRKRRAAERAAE  157 (167)
Q Consensus       141 ddd------~p~RRRR~~eraae  157 (167)
                      ++.      +++||||++++++.
T Consensus       106 dd~~~~l~~~~rRRR~~~d~~~d  128 (156)
T PF12619_consen  106 DDEDFDLPVQRRRRRRRYDEAAD  128 (156)
T ss_pred             ccccccccccchhhHHHhhhhcc
Confidence            332      23788888888653

During late mitosis and G1, replication origins are 'licensed' for replication by loading the minichromosome maintenance (MCM) 2-7 proteins pre-replicative complex essential for initiating and elongating replication forks during S phase. The components of the MCM2-7 complex in Homo sapiens (Human) (EBI-913604 from INTACT) are: . DNA replication licensing factor MCM2, P49736 from SWISSPROT, IPR008045 from INTERPRO DNA replication licensing factor MCM3, P25205 from SWISSPROT, IPR008046 from INTERPRO DNA replication licensing factor MCM4, P33991 from SWISSPROT, IPR008047 from INTERPRO DNA replication licensing factor MCM5, P33992 from SWISSPROT, IPR008048 from INTERPRO DNA replication licensing factor MCM6, Q14566 from SWISSPROT, IPR008049 from INTERPRO DNA replication licensing factor MCM7, P33993 from SWISSPROT, IPR008050 from INTERPRO Studies in Xenopus eggs have showed the 6 MCM proteins to form hexamers, where each class is present in equal stoichiometry []. The initiation of DNA synthesis in eukaryotes requires the binding of origin recognition complex (ORC) - a complex of six subunits - to the autonomously replicating sequences (ARS) of replication origins [], the recruitment of CDC6 and binding of the MCM protein complex to the ARS to form the prereplicative complex (pre-RC) []. DNA synthesis is subsequently initiated by the activation of pre-RC by CDC7 and CDC28 protein kinases []. MCM proteins associate with chromatin during G1 phase and dissociate again during S phase, remaining unbound until the end of mitosis []. Periodic chromatin association of the MCM complex ensures that DNA synthesis from replication origins is initiated only once during the cell cycle, avoiding over-replication of parts of the genome. Elongation of replication forks away from individual replication origins results in displacement of the MCM-containing complex from chromatin. Budding yeast MCM proteins are translocated in and out of the nucleus during each cell cycle. However, fission yeast MCMs, like those in metazoans, are constitutively nuclear. The six classes of MCM protein together share a conserved 200 amino acid residue domain, while sequences within the same class show more extensive similarity outside this region. The conserved central domain is similar to the A motif of the Walker-type NTP-binding domain; it also shares similarity with ATPase domains of prokaryotic NtrC-related transcription regulators. The ATP-binding motif is thought to mediate ATP-dependent opening of double-stranded DNA at replication origins. In addition to the central region, MCM2, 4, 6 and 7 contain a zinc-finger-type motif thought to have a role in mediating protein-protein interactions []. Moreover, a conserved alpha-helical structure in the C-terminal region has been noted; this comprises a conserved heptad repeat and a putative four-helix bundle. Most of the MCM proteins contain acidic regions, or alternately repeated clusters of acidic and basic residues. In addition to its role in initiation of DNA replication, MCM2 is able to inhibit the MCM4,6,7 helicase. Studies on murine MCM2 indicate that its C terminus is required for interaction with MCM4, as well as for inhibition of the DNA helicase activity of the MCM4,6,7 complex. The N-terminal region, which contains an H3-binding domain and a region required for nuclear localisation, is required for the phosphorylation by CDC7 kinase. ; GO: 0003677 DNA binding, 0005524 ATP binding, 0006270 DNA-dependent DNA replication initiation, 0005634 nucleus

>KOG0477|consensus

Probab=99.61  E-value=2.9e-16  Score=149.49  Aligned_cols=73  Identities=47%  Similarity=0.796  Sum_probs=65.7

Q ss_pred             cCCCCCCCCCCCCCCCccccccCCCCCCCCCccccccccccccchhhccCCCCCCCccCCCCCCCcccccCCHHHHHHHH
Q psy13404         34 VDEEAPFENEENFNDGDSDIIGAGSPLRVEDEDEGSGEELFGDNLENDYRPMPALDRYDHDQLDDSDYSVISADARAEAE  113 (167)
Q Consensus        34 ~~~~~p~~~~~~~ede~e~l~gd~~~~~~~deEEEeGEDLfgDnmE~DYr~~pElD~Yd~~gLDD~dyeemd~~~RRaaE  113 (167)
                      ...++|.++  +|++|.+            ++||++||||||++|++||++++++|+|+.+ ||| ++.+|+...|++|+
T Consensus        21 ~~~~~~~g~--~f~~e~e------------~~eee~ge~l~~d~me~Dy~~~~e~d~yd~~-~dd-~~~el~~~~r~a~~   84 (854)
T KOG0477|consen   21 DALTSPPGD--PFEDEEE------------DEEEEEGEDLFGDGMERDYRAMPELDQYDAE-LDD-DVEELSLSDRRAAD   84 (854)
T ss_pred             ccCCCCCCC--CCCCccc------------chhhhhhhhhhccchhhhhccChhhhhcccc-ccc-cHhhhchhhHHHHH
Confidence            477888884  9999977            2667889999999999999999999999998 988 59999999999999


Q ss_pred             HHHHHhHHH
Q psy13404        114 RALRRRDRE  122 (167)
Q Consensus       114 ~~L~rRDr~  122 (167)
                      +.|++||+.
T Consensus        85 ~~l~~rd~~   93 (854)
T KOG0477|consen   85 ADLRERDRG   93 (854)
T ss_pred             hHHhhhhcC
Confidence            999999993

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00