Psyllid ID: psy13420

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
MRVCVDEIIANDRLFSNYYKCLMDTGACSPDGAELKMNNSSNTIIMFKSLVLVACLACIGSVLTSPAYTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKVLPDAIATECGGCSDKQKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYDAQLKAL
Secondary Structure (PSIPRED)
ccccHHHHHccHHHHHHHHHHHHccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHccHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHccccHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHcHHHHHHHHHHHcccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcHcccccccccccHHHHHHcHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccHHHHHHHHccc
Coil and Loop (DISEMBL)
MRVCVDEIIANDRLFSNYYKClmdtgacspdgaelkmnnssntIIMFKSLVLVACLACIgsvltspayttkydnvdldeiianDRLFTNYYKClmdtgacspdgaelkkvlpdaiatecggcsdkqKEGAKKIFKFLIEKKPEEWKalegkydpsgsykaKYDAQLKAL
Flexible Loop (DISEMBL)
MRVCVDEIIANDRLFSNYYKCLMDTGACSPDGAELKMNNSSNTIIMFKSLVLVACLACIGSVLTSPAYTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKVLPDAIATecggcsdkqkeGAKKIFKFLIEKKPEEWKalegkydpsgsykaKYDAQLKAL
Low Complexity Region (SEG)
MRVCVDEIIANDRLFSNYYKCLMDTGACSPDGAELKMNNSSNTIIMFKSLVLVACLACIGSVLTSPAYTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKVLPDAIATECGGCSDKQKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYDAQLKAL
Disordered region (IsUnstruct)
**VCVDEIIANDRLFSNYYKCLMDTGACSPDGAELKMNNSSNTIIMFKSLVLVACLACIGSVLTSPAYTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKVLPDAIATECGGCSDK**EGAKKIFKFLIEKK****************************
Disordered Region (DISOPRED)
MRVCVDEIIANDRLFSNYYKCLMDTGACSPDGAELKMNNSSNTIIMFKSLVLVACLACIGSVLTSPAYTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKVLPDAIATECGGCSDKQKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYDAQLKAL
Disordered Region (DISEMBL)
MRVCVDEIIANDRLFSNYYKCLMDTGACSPDGAELKMNNSSNTIIMFKSLVLVACLACIGSVLTSPAYTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKVLPDAIATECGGCSDKQKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYDAQLKAL
Disordered Region (DISPRO)
*RVCVDEIIANDRLFSNYYKCLMDTGACSPDGAELKMNNSSNTIIMFKSLVLVACLACIGSVLTSPAYTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKVLPDAIATECGGCSDKQKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYDAQLK**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRVCVDEIIANDRLFSNYYKCLMDTGACSPDGAELKMNNSSNTIIMFKSLVLVACLACIGSVLTSPAYTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKVLPDAIATECGGCSDKQKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYDAQLKAL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	169	2.2.26 [Sep-21-2011]
Q9W1C9	126	Ejaculatory bulb-specific	yes	N/A	0.597	0.801	0.574	2e-31
Q27377	155	Putative odorant-binding	no	N/A	0.591	0.645	0.51	2e-26
P86354	44	Viresin (Fragment) OS=Hel	N/A	N/A	0.260	1.0	0.568	3e-07

>sp|Q9W1C9|PEB3_DROME Ejaculatory bulb-specific protein 3 OS=Drosophila melanogaster GN=PebIII PE=1 SV=2

 Score =  135 bits (339), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 58/101 (57%), Positives = 77/101 (76%)

Query: 68  YTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKVLPDAIATECGGCSDKQK 127
           YTTKYDN+D+DEI+ +DRLF NY+KCL+D G C+P+G ELKK LPDA+ TEC  CS+KQ+
Sbjct: 21  YTTKYDNIDVDEILKSDRLFGNYFKCLVDNGKCTPEGRELKKSLPDALKTECSKCSEKQR 80

Query: 128 EGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYDAQLKA 168
           +   K+ +++IE KPEEWK L+ KYDP   Y  +Y A  +A
Sbjct: 81  QNTDKVIRYIIENKPEEWKQLQAKYDPDEIYIKRYRATAEA 121

Protein component of the posterior mating plug.
Drosophila melanogaster (taxid: 7227)

>sp|Q27377|OB10_DROME Putative odorant-binding protein A10 OS=Drosophila melanogaster GN=a10 PE=1 SV=2

 Score =  118 bits (295), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 51/100 (51%), Positives = 71/100 (71%)

Query: 63  LTSPAYTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKVLPDAIATECGGC 122
           +   AY  K+DNVDLDEI+  +RL  NY KCL  TG C+PD   LK++LPDAI T+C  C
Sbjct: 45  MVEQAYDDKFDNVDLDEILNQERLLINYIKCLEGTGPCTPDAKMLKEILPDAIQTDCTKC 104

Query: 123 SDKQKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKY 162
           ++KQ+ GA+K+ + LI+ +P +W+ LE  YDP G+Y+ KY
Sbjct: 105 TEKQRYGAEKVTRHLIDNRPTDWERLEKIYDPEGTYRIKY 144

Drosophila melanogaster (taxid: 7227)

>sp|P86354|VIRE2_HELVI Viresin (Fragment) OS=Heliothis virescens PE=1 SV=1

 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 72  YDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKVLPDAI 115
           YDNV+LDEI+ANDRL   Y KCL+D G  +PD  ELK+ +  A+
Sbjct: 1   YDNVNLDEILANDRLLVPYIKCLLDEGKKAPDAKELKEHIRXAL 44

Has antibacterial activity against the Gram-negative bacteria E.coli and E.cloacae, but not against the Gram-negative bacteria P.aeruginosa, P.vulgaris, K.pneumoniae and S.enteritidis or the Gram-positive bacteria S.aureus, S.epidermidis and S.salivarius.

Heliothis virescens (taxid: 7102)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
291088334	128	chemosensory protein 1 [Delia antiqua]	0.692	0.914	0.579	1e-33
215254084	129	putative chemosensory protein CSP8 [Nila	0.674	0.883	0.610	1e-33
296142197	129	putative chemosensory binding protein [S	0.668	0.875	0.591	1e-33
332374746	138	unknown [Dendroctonus ponderosae]	0.692	0.847	0.545	3e-33
385199910	138	chemosensory protein [Dendroctonus ponde	0.692	0.847	0.545	4e-33
195122694	126	GI18859 [Drosophila mojavensis] gi|19391	0.698	0.936	0.563	4e-33
77415652	126	hypothetical protein [Glossina morsitans	0.704	0.944	0.540	1e-32
281426845	128	chemosensory protein 3 [Glossina morsita	0.680	0.898	0.530	2e-32
312382185	518	hypothetical protein AND_05223 [Anophele	0.698	0.227	0.541	3e-32
195028394	127	GH21706 [Drosophila grimshawi] gi|193903	0.715	0.952	0.520	3e-32

>gi|291088334|dbj|BAI82449.1| chemosensory protein 1 [Delia antiqua]

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 69/119 (57%), Positives = 86/119 (72%), Gaps = 2/119 (1%)

Query: 49  SLVLVACLACIGSVLTSPAYTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELK 108
           ++V+ A +A I  VL    YTTK+DN+D+DEI+ +DRLF NYYKCL D G C+PDG ELK
Sbjct: 6   AVVVAAFMATI--VLADDKYTTKFDNIDVDEILKSDRLFNNYYKCLTDEGKCTPDGRELK 63

Query: 109 KVLPDAIATECGGCSDKQKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYDAQLK 167
           K LPDA+ TEC  CS KQKE ++KI  F++E KPEEWK L+ KYDP G Y  KY  + K
Sbjct: 64  KNLPDALQTECSKCSAKQKESSEKILNFIVENKPEEWKVLQAKYDPEGVYITKYREEAK 122

Source: Delia antiqua

Species: Delia antiqua

Genus: Delia

Family: Anthomyiidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|215254084|gb|ACJ64054.1| putative chemosensory protein CSP8 [Nilaparvata lugens]

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 72/118 (61%), Positives = 89/118 (75%), Gaps = 4/118 (3%)

Query: 50  LVLVACLACIGSVLTSPA--YTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAEL 107
           LV VA L C  +VL  PA  YTTKYDN+DLDE+++N RLF +Y+KCLM  G C+PDG EL
Sbjct: 6   LVFVAVL-CFSAVLAKPADKYTTKYDNIDLDEVLSNQRLFDSYFKCLMG-GKCTPDGQEL 63

Query: 108 KKVLPDAIATECGGCSDKQKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYDAQ 165
           +  LPDA+AT C  CS+KQKEG +K+ KFLIEKKP E+  LE KYDP G+Y+ KY A+
Sbjct: 64  RDALPDALATACEKCSEKQKEGTEKVMKFLIEKKPTEFAELEKKYDPQGTYRQKYKAE 121

Source: Nilaparvata lugens

Species: Nilaparvata lugens

Genus: Nilaparvata

Family: Delphacidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|296142197|gb|ADG96053.1| putative chemosensory binding protein [Stomoxys calcitrans]

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/115 (59%), Positives = 84/115 (73%), Gaps = 2/115 (1%)

Query: 51  VLVACLACIGSVLTSPAYTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKV 110
           +  ACLA   ++     YTTKYDNVDLDEI+ +DRLF NYY CL+D G C+PDG ELK +
Sbjct: 9   IFAACLAM--AIADDEKYTTKYDNVDLDEILKSDRLFKNYYNCLVDQGKCTPDGRELKTI 66

Query: 111 LPDAIATECGGCSDKQKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYDAQ 165
           LPDA+ TEC  C++KQKEGA K+ +F+IE K EEWKAL+ KYDP   Y  KY A+
Sbjct: 67  LPDALKTECSKCNEKQKEGADKVIRFMIENKAEEWKALQAKYDPEQVYYNKYKAE 121

Source: Stomoxys calcitrans

Species: Stomoxys calcitrans

Genus: Stomoxys

Family: Muscidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332374746|gb|AEE62514.1| unknown [Dendroctonus ponderosae]

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 66/121 (54%), Positives = 87/121 (71%), Gaps = 4/121 (3%)

Query: 46  MFKSLVLVACLACIGSVLTS----PAYTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACS 101
           M+K ++L + L CIG  L        YTTKYDNVD++E++ N+RL  NY  CL+D G CS
Sbjct: 1   MWKLVLLGSLLICIGQTLAEVTEKSQYTTKYDNVDINEVVHNERLLKNYVNCLLDRGPCS 60

Query: 102 PDGAELKKVLPDAIATECGGCSDKQKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAK 161
           PDG ELKK +PDAI T+C  CSDKQ+EG++ + +FLI+ KPE W  L+ KYDP+GSYK +
Sbjct: 61  PDGLELKKNMPDAIETDCSKCSDKQREGSEAMMRFLIDNKPEYWNPLQEKYDPTGSYKKR 120

Query: 162 Y 162
           Y
Sbjct: 121 Y 121

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|385199910|gb|AFI45003.1| chemosensory protein [Dendroctonus ponderosae]

 Score =  146 bits (368), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 66/121 (54%), Positives = 87/121 (71%), Gaps = 4/121 (3%)

Query: 46  MFKSLVLVACLACIGSVLTS----PAYTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACS 101
           M+K ++L + L CIG  L        YTTKYDNVD++E++ N+RL  NY  CL+D G CS
Sbjct: 1   MWKLVLLGSLLICIGQTLAEVTEKSQYTTKYDNVDINEVVHNERLLKNYVNCLLDRGPCS 60

Query: 102 PDGAELKKVLPDAIATECGGCSDKQKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAK 161
           PDG ELKK +PDAI T+C  CSDKQ+EG++ + +FLI+ KPE W  L+ KYDP+GSYK +
Sbjct: 61  PDGLELKKNMPDAIETDCSKCSDKQREGSEAMMRFLIDNKPEYWNPLQEKYDPTGSYKKR 120

Query: 162 Y 162
           Y
Sbjct: 121 Y 121

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195122694|ref|XP_002005846.1| GI18859 [Drosophila mojavensis] gi|193910914|gb|EDW09781.1| GI18859 [Drosophila mojavensis]

 Score =  145 bits (367), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 85/119 (71%), Gaps = 1/119 (0%)

Query: 47  FKSLVLVACLACIGSVLTSPAYTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAE 106
            KS +L   LA I  V     YTTKYDN+D+DEI+ +DRLFTNY+KCL+DTG C+PD  E
Sbjct: 1   MKSFILFFALA-IACVAADEKYTTKYDNIDVDEILRSDRLFTNYFKCLVDTGKCTPDARE 59

Query: 107 LKKVLPDAIATECGGCSDKQKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYDAQ 165
           LKK LPDA+ TEC  CS+KQK+   K+ +++I+ KPEEWK L+ KYDP   Y  +Y AQ
Sbjct: 60  LKKSLPDALLTECSKCSEKQKQNTDKVIRYVIDNKPEEWKVLQAKYDPDEVYIKRYRAQ 118

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|77415652|emb|CAJ01495.1| hypothetical protein [Glossina morsitans] gi|281426841|emb|CBA11327.1| chemosensory protein 1 [Glossina morsitans morsitans] gi|289740103|gb|ADD18799.1| ejaculatory bulb protein III [Glossina morsitans morsitans]

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 66/122 (54%), Positives = 89/122 (72%), Gaps = 3/122 (2%)

Query: 47  FKSLVLVACLACIGSVLTSPA---YTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPD 103
            K L +VA +A + +V+   A   YTTKYD+VD+DE++ +DRLF NYY CL+D G C+PD
Sbjct: 1   MKYLTIVAVIATLSAVVVMGAEEKYTTKYDDVDVDEVLKSDRLFKNYYNCLIDQGKCTPD 60

Query: 104 GAELKKVLPDAIATECGGCSDKQKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYD 163
             ELKK LPDA+ TEC  CS+KQK+ ++K+ K L++ KPEEWK L+ KYDP G Y +KY 
Sbjct: 61  ARELKKSLPDALQTECSKCSEKQKKTSEKVIKHLMDHKPEEWKVLQTKYDPEGIYYSKYK 120

Query: 164 AQ 165
           A+
Sbjct: 121 AR 122

Source: Glossina morsitans

Species: Glossina morsitans

Genus: Glossina

Family: Glossinidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|281426845|emb|CBA11329.1| chemosensory protein 3 [Glossina morsitans morsitans]

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 61/115 (53%), Positives = 86/115 (74%)

Query: 51  VLVACLACIGSVLTSPAYTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKV 110
           ++VA +    +V+    YTTK+DN+D+DEI+A+DRLF NY+KCL+D G C+P+G ELK+ 
Sbjct: 6   IVVAVVLMTVAVIAEEQYTTKFDNIDVDEILASDRLFDNYFKCLVDEGKCTPEGRELKRS 65

Query: 111 LPDAIATECGGCSDKQKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYDAQ 165
           LPDA+ T C  C+DKQK    K+ +FL EKKP++WKAL+ KYDP+G Y  KY ++
Sbjct: 66  LPDALETACAKCNDKQKATVDKVIRFLTEKKPDQWKALQAKYDPAGEYLKKYRSE 120

Source: Glossina morsitans morsitans

Species: Glossina morsitans

Genus: Glossina

Family: Glossinidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312382185|gb|EFR27728.1| hypothetical protein AND_05223 [Anopheles darlingi]

 Score =  142 bits (359), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 65/120 (54%), Positives = 84/120 (70%), Gaps = 2/120 (1%)

Query: 52  LVACLACIGSVLTSPAYTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKVL 111
           +V  LA I +V     YTTKYD VDLDEI+ +DRLF NYYKCLMD G C+PDG ELK++L
Sbjct: 397 VVVALALIATVAAQEKYTTKYDGVDLDEILKSDRLFNNYYKCLMDIGRCTPDGNELKRIL 456

Query: 112 PDAIATECGGCSDKQKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKY--DAQLKAL 169
           PDA+ T+C  CS+KQK G  K+  +LI+ +  +W+AL+ KYDP   Y  KY  DA+ K +
Sbjct: 457 PDALKTDCAKCSEKQKSGTDKVINYLIDNRKSQWEALQKKYDPENVYVNKYREDAKKKGI 516

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195028394|ref|XP_001987061.1| GH21706 [Drosophila grimshawi] gi|193903061|gb|EDW01928.1| GH21706 [Drosophila grimshawi]

 Score =  142 bits (359), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 63/121 (52%), Positives = 85/121 (70%)

Query: 47  FKSLVLVACLACIGSVLTSPAYTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAE 106
            K+  L+  LA I  V     YTTKYDN+D+DEI+ +DRLF NY+KCL+DTG C+P+  E
Sbjct: 1   MKATFLLVTLAIIVCVNGDEKYTTKYDNIDVDEILRSDRLFNNYFKCLIDTGKCTPEAKE 60

Query: 107 LKKVLPDAIATECGGCSDKQKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYDAQL 166
           LKK LPDA+ TEC  CS+KQ++ + K+ + +I+ KP+EWK L+ KYDP   Y  +Y AQ 
Sbjct: 61  LKKSLPDALKTECSKCSEKQRQNSDKVLRHIIDHKPDEWKVLQAKYDPEEVYSKRYRAQA 120

Query: 167 K 167
           K
Sbjct: 121 K 121

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
FB|FBgn0011695	126	PebIII "Ejaculatory bulb prote	0.692	0.928	0.521	1.8e-32
FB|FBgn0035089	121	Phk-3 "Pherokine 3" [Drosophil	0.692	0.966	0.45	2.8e-27
FB|FBgn0011293	155	a10 "antennal protein 10" [Dro	0.621	0.677	0.490	1.9e-26
FB|FBgn0050172	124	CG30172 [Drosophila melanogast	0.686	0.935	0.239	7.6e-09

FB|FBgn0011695 PebIII "Ejaculatory bulb protein III" [Drosophila melanogaster (taxid:7227)]

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 62/119 (52%), Positives = 85/119 (71%)

Query:    52 LVACLACIGSVLTSPA--YTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKK 109
             ++  L  +G VL +    YTTKYDN+D+DEI+ +DRLF NY+KCL+D G C+P+G ELKK
Sbjct:     3 MILALVVLGLVLVAAEDKYTTKYDNIDVDEILKSDRLFGNYFKCLVDNGKCTPEGRELKK 62

Query:   110 VLPDAIATECGGCSDKQKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYDAQLKA 168
              LPDA+ TEC  CS+KQ++   K+ +++IE KPEEWK L+ KYDP   Y  +Y A  +A
Sbjct:    63 SLPDALKTECSKCSEKQRQNTDKVIRYIIENKPEEWKQLQAKYDPDEIYIKRYRATAEA 121

GO:0007552 "metamorphosis" evidence=IEP

GO:0009615 "response to virus" evidence=IEP

GO:0005576 "extracellular region" evidence=ISM;IDA

FB|FBgn0035089 Phk-3 "Pherokine 3" [Drosophila melanogaster (taxid:7227)]

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 54/120 (45%), Positives = 82/120 (68%)

Query:    46 MFKSLVLVACLACIGSVLTSP--AYTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPD 103
             M  SL LV C+ C+G    +P   YT KYD+V++DE++ N+R+  NY KCLMD G C+ +
Sbjct:     1 MKASLALVFCV-CVGLAAAAPEKTYTNKYDSVNVDEVLGNNRVLGNYLKCLMDKGPCTAE 59

Query:   104 GAELKKVLPDAIATECGGCSDKQKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYD 163
             G ELK++LPDA+ ++C  C++ Q++ ++K+  +L   K  EWK L  KYDP G Y+AK++
Sbjct:    60 GRELKRLLPDALHSDCSKCTEVQRKNSQKVINYLRANKAGEWKLLLNKYDPQGIYRAKHE 119

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS;NAS

GO:0019992 "diacylglycerol binding" evidence=ISS

GO:0007362 "terminal region determination" evidence=NAS

GO:0004672 "protein kinase activity" evidence=NAS

GO:0006468 "protein phosphorylation" evidence=NAS

GO:0007552 "metamorphosis" evidence=IEP

GO:0009617 "response to bacterium" evidence=IEP

GO:0005576 "extracellular region" evidence=ISM

FB|FBgn0011293 a10 "antennal protein 10" [Drosophila melanogaster (taxid:7227)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 52/106 (49%), Positives = 75/106 (70%)

Query:    63 LTSPAYTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKVLPDAIATECGGC 122
             +   AY  K+DNVDLDEI+  +RL  NY KCL  TG C+PD   LK++LPDAI T+C  C
Sbjct:    45 MVEQAYDDKFDNVDLDEILNQERLLINYIKCLEGTGPCTPDAKMLKEILPDAIQTDCTKC 104

Query:   123 SDKQKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYDAQLKA 168
             ++KQ+ GA+K+ + LI+ +P +W+ LE  YDP G+Y+ KY  ++K+
Sbjct:   105 TEKQRYGAEKVTRHLIDNRPTDWERLEKIYDPEGTYRIKYQ-EMKS 149

GO:0007606 "sensory perception of chemical stimulus" evidence=ISS

GO:0005550 "pheromone binding" evidence=NAS

GO:0005549 "odorant binding" evidence=NAS

GO:0005576 "extracellular region" evidence=ISM

FB|FBgn0050172 CG30172 [Drosophila melanogaster (taxid:7227)]

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 28/117 (23%), Positives = 60/117 (51%)

Query:    37 MNNSSNTIIMFKSLVLVACLACIGSVLTSPAYTTKYDNVDLDEIIANDRLFTNYYKCLMD 96
             ++ S   +++ K+ V+   +  I  ++   + + + D  ++++++ N  + +    C++ 
Sbjct:     7 VSRSERMLLLNKNRVISLVVNFIFLIILISS-SVQADERNINKLLNNQVVVSRQIMCILG 65

Query:    97 TGACSPDGAELKKVLPDAIATECGGCSDKQKEGAKKIFKFLIEKKPEEWKALEGKYD 153
                C   G +LK  LP+ I  +C  CS +Q + A+K+  FL  + P+ W  L  KYD
Sbjct:    66 KSECDQLGLQLKAALPEVITRKCRNCSPQQAQKAQKLTTFLQTRYPDVWAMLLRKYD 122


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.404    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      169       169   0.00082  108 3  11 22  0.41    32
                                                     31  0.47    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  588 (63 KB)
  Total size of DFA:  155 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.70u 0.08s 16.78t   Elapsed:  00:00:10
  Total cpu time:  16.71u 0.08s 16.79t   Elapsed:  00:00:10
  Start:  Thu Aug 15 16:01:23 2013   End:  Thu Aug 15 16:01:33 2013

GO:0005576 "extracellular region" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9W1C9	PEB3_DROME	No assigned EC number	0.5742	0.5976	0.8015	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	169
pfam03392	95	pfam03392, OS-D, Insect pheromone-binding family,	4e-56
pfam03392	95	pfam03392, OS-D, Insect pheromone-binding family,	4e-13
cd11288	92	cd11288, gelsolin_S5_like, Gelsolin sub-domain 5-l	0.003

>gnl|CDD|146171 pfam03392, OS-D, Insect pheromone-binding family, A10/OS-D

 Score =  170 bits (434), Expect = 4e-56
 Identities = 65/95 (68%), Positives = 77/95 (81%)

Query: 68  YTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKVLPDAIATECGGCSDKQK 127
           YTTKYDN+DLDEI+ NDRL  NY KCL+D G C+P+G ELKKVLPDA+ T+C  C++KQK
Sbjct: 1   YTTKYDNIDLDEILNNDRLLKNYVKCLLDKGPCTPEGKELKKVLPDALETDCAKCTEKQK 60

Query: 128 EGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKY 162
           EGA+K+ KFLIE KPEEWK L  KYDP G Y+ KY
Sbjct: 61  EGARKVIKFLIENKPEEWKELVAKYDPEGEYRKKY 95

Length = 95

>gnl|CDD|146171 pfam03392, OS-D, Insect pheromone-binding family, A10/OS-D

 Score = 61.4 bits (150), Expect = 4e-13
 Identities = 20/32 (62%), Positives = 25/32 (78%)

Query: 5  VDEIIANDRLFSNYYKCLMDTGACSPDGAELK 36
          +DEI+ NDRL  NY KCL+D G C+P+G ELK
Sbjct: 10 LDEILNNDRLLKNYVKCLLDKGPCTPEGKELK 41

Length = 95

>gnl|CDD|200444 cd11288, gelsolin_S5_like, Gelsolin sub-domain 5-like domain found in gelsolin, severin, villin, and related proteins

 Score = 34.9 bits (81), Expect = 0.003
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 11/42 (26%)

Query: 121 GCSDKQKEGAKKIFKFLIEKK----------PEE-WKALEGK 151
           G S+ ++E AK +  FL  K           P+E W+AL GK
Sbjct: 49  GSSEDERELAKDVASFLKPKASLQEVAEGSEPDEFWEALGGK 90

Gelsolin repeats occur in gelsolin, severin, villin, advillin, villidin, supervillin, flightless, quail, fragmin, and other proteins, usually in several copies. They co-occur with villin headpiece domains, leucine-rich repeats, and several other domains. These gelsolin-related actin binding proteins (GRABPs) play regulatory roles in the assembly and disassembly of actin filaments; they are involved in F-actin capping, uncapping, severing, or the nucleation of actin filaments. Severing of actin filaments is Ca2+ dependent. Villins are also linked to generating bundles of F-actin with uniform filament polarity, which is most likely mediated by their extra villin headpiece domain. Many family members have also adopted functions in the nucleus, including the regulation of transcription. Supervillin, gelsolin, and flightless I are involved in intracellular signaling via nuclear hormone receptors. The gelsolin-like domain is distantly related to the actin depolymerizing domains found in cofilin and similar proteins. Length = 92

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	169
PF03392	95	OS-D: Insect pheromone-binding family, A10/OS-D; I	100.0
PF03392	95	OS-D: Insect pheromone-binding family, A10/OS-D; I	99.49
PF04030	259	ALO: D-arabinono-1,4-lactone oxidase ; InterPro: I	85.22

>PF03392 OS-D: Insect pheromone-binding family, A10/OS-D; InterPro: IPR005055 A class of small (14-20 Kd) water-soluble proteins, called odorant binding proteins (OBPs), first discovered in the insect sensillar lymph but also in the mucus of vertebrates, is postulated to mediate the solubilisation of hydrophobic odorant molecules, and thereby to facilitate their transport to the receptor neurons

Probab=100.00  E-value=7.9e-47  Score=278.59  Aligned_cols=95  Identities=57%  Similarity=1.139  Sum_probs=90.5

Q ss_pred             cCCcCccCCHHHHhcCHHHHHHHhhccccCCCCChhHHHHHHHHHHHHhhcCCCCCHHHHhhHHHHHHHHHhcChHHHHH
Q psy13420         68 YTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKVLPDAIATECGGCSDKQKEGAKKIFKFLIEKKPEEWKA  147 (169)
Q Consensus        68 Y~~~yDniDid~iL~N~rl~~~y~~Clld~gpCt~~g~~lK~~lPeal~t~C~KCt~kQK~~~~kvi~~l~~~~P~~w~~  147 (169)
                      |+++||||||++||+|+|++++|++||||+|||||+|++||++|||||+|+|+||||+||+++++|++||++++|++|++
T Consensus         1 Y~~~yD~iDvd~iL~N~rl~~~y~~ClldkgpCt~~~~~lK~~ipeal~t~C~KCt~kQK~~~~kv~~~l~~~~P~~w~~   80 (95)
T PF03392_consen    1 YTTKYDNIDVDEILKNDRLLKSYIDCLLDKGPCTPEGKELKKVIPEALKTNCAKCTPKQKENARKVIKFLKKNYPDEWEE   80 (95)
T ss_dssp             -HCTTTSSCHHHHHH-HHHHHHHHHHHTSSSTSHHHHHHHHHHHHHHHHCTTTTS-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCccccccCHHHHHcCHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHcCHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhCCCchhHHHH
Q psy13420        148 LEGKYDPSGSYKAKY  162 (169)
Q Consensus       148 l~~KyDP~~~y~~~~  162 (169)
                      |++||||+|+|+++|
T Consensus        81 l~~KyDp~~~y~~ky   95 (95)
T PF03392_consen   81 LVKKYDPEGKYRKKY   95 (95)
T ss_dssp             HHHHHTTT-TTHHHH
T ss_pred             HHHHHCCCcchhhcC
Confidence            999999999999998

The product of a gene expressed in the olfactory system of Drosophila melanogaster (Fruit fly), OS-D, shares features common to vertebrate odorant-binding proteins, but has a primary structure unlike odorant-binding proteins []. OS-D derivatives have subsequently been found in chemosensory organs of phylogenetically distinct insects, including cockroaches, phasmids and moths, suggesting that OS-D-like proteins seem to be conserved in the insect phylum.; PDB: 1KX9_A 1N8U_A 1KX8_A 1K19_A 1N8V_A 2GVS_A 2JNT_A.

>PF03392 OS-D: Insect pheromone-binding family, A10/OS-D; InterPro: IPR005055 A class of small (14-20 Kd) water-soluble proteins, called odorant binding proteins (OBPs), first discovered in the insect sensillar lymph but also in the mucus of vertebrates, is postulated to mediate the solubilisation of hydrophobic odorant molecules, and thereby to facilitate their transport to the receptor neurons

Probab=99.49  E-value=2e-14  Score=106.13  Aligned_cols=51  Identities=37%  Similarity=0.719  Sum_probs=45.5

Q ss_pred             CCCHHHHhcCHHhHHHHhccccCCCCCCcchHhhhhc-----------cCchhHHHHHHHHH
Q psy13420          2 RVCVDEIIANDRLFSNYYKCLMDTGACSPDGAELKMN-----------NSSNTIIMFKSLVL   52 (169)
Q Consensus         2 ~idv~~Il~n~rl~~~y~~C~l~~gpCt~e~~~lk~~-----------~~s~~~~~MK~~~~   52 (169)
                      +|||++||+|+|++++|++|||++|||||+|++||++           ||+.|..+++.++-
T Consensus         7 ~iDvd~iL~N~rl~~~y~~ClldkgpCt~~~~~lK~~ipeal~t~C~KCt~kQK~~~~kv~~   68 (95)
T PF03392_consen    7 NIDVDEILKNDRLLKSYIDCLLDKGPCTPEGKELKKVIPEALKTNCAKCTPKQKENARKVIK   68 (95)
T ss_dssp             SSCHHHHHH-HHHHHHHHHHHTSSSTSHHHHHHHHHHHHHHHHCTTTTS-HHHHHHHHHHHH
T ss_pred             ccCHHHHHcCHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHH
Confidence            6999999999999999999999999999999999998           88888888877754

The product of a gene expressed in the olfactory system of Drosophila melanogaster (Fruit fly), OS-D, shares features common to vertebrate odorant-binding proteins, but has a primary structure unlike odorant-binding proteins []. OS-D derivatives have subsequently been found in chemosensory organs of phylogenetically distinct insects, including cockroaches, phasmids and moths, suggesting that OS-D-like proteins seem to be conserved in the insect phylum.; PDB: 1KX9_A 1N8U_A 1KX8_A 1K19_A 1N8V_A 2GVS_A 2JNT_A.

>PF04030 ALO: D-arabinono-1,4-lactone oxidase ; InterPro: IPR007173 This domain is specific to D-arabinono-1,4-lactone oxidase 1

Probab=85.22  E-value=0.94  Score=37.75  Aligned_cols=31  Identities=26%  Similarity=0.478  Sum_probs=21.2

Q ss_pred             HHHHhcCh--HHHHHHHHhhCCCchhHHHHHHH
Q psy13420        135 KFLIEKKP--EEWKALEGKYDPSGSYKAKYDAQ  165 (169)
Q Consensus       135 ~~l~~~~P--~~w~~l~~KyDP~~~y~~~~~~~  165 (169)
                      ..+.+.||  ++|.++++++||+|.+...|.+.
T Consensus       226 ~~l~~~Yp~~~~F~~~r~~~DP~g~F~n~~~~r  258 (259)
T PF04030_consen  226 EQLRKLYPRLDDFLAVRKKLDPQGVFLNDYLRR  258 (259)
T ss_dssp             HHHHHT-TTHHHHHHHHHHH-TT-TT--HHHH-
T ss_pred             HHHHHHCcCHHHHHHHHHHhCCCCCCCCHhhhc
Confidence            33778888  89999999999999999988653

1.3.37 from EC, which is involved in the final step of the D-erythroascorbic acid biosynthesis pathway [].; GO: 0003885 D-arabinono-1,4-lactone oxidase activity, 0055114 oxidation-reduction process, 0016020 membrane; PDB: 2VFU_A 2VFV_A 2VFT_A 2VFS_A 2VFR_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	169
2gvs_A	109	Nmr Solution Structure Of Cspsg4 Length = 109		1e-29
1kx8_A	112	Antennal Chemosensory Protein A6 From Mamestra Bras		1e-24
2jnt_A	108	Structure Of Bombyx Mori Chemosensory Protein 1 In		5e-19

>pdb|2GVS|A Chain A, Nmr Solution Structure Of Cspsg4 Length = 109

Iteration: 1
 Score =  125 bits (313), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 58/104 (55%), Positives = 74/104 (71%), Gaps = 2/104 (1%)
Query: 68  YTTKYDNVDLDEIIANDRLFTNYYKCLM--DTGACSPDGAELKKVLPDAIATECGGCSDK 125
           YTTKYDNV+LDEI+ANDRL   Y +CL+  D   C+ DG ELK V+PDA++ EC  C++K
Sbjct: 4   YTTKYDNVNLDEILANDRLLNKYVQCLLEDDESNCTADGKELKSVIPDALSNECAKCNEK 63
Query: 126 QKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYDAQLKAL 169
           QKEG KK+ K LI  KP+ W  L+ KYDP G+Y  KY+ + K L
Sbjct: 64  QKEGTKKVLKHLINHKPDVWAQLKAKYDPDGTYSKKYEDREKEL 107

>pdb|1KX8|A Chain A, Antennal Chemosensory Protein A6 From Mamestra Brassicae, Tetragonal Form Length = 112

Iteration: 1
 Score =  108 bits (270), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 48/101 (47%), Positives = 71/101 (70%)
Query: 68  YTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKVLPDAIATECGGCSDKQK 127
           YT KYDN++LDEI+AN RL   Y  C+M+ G CSP+G ELK+ L DAI   C  C++ Q+
Sbjct: 4   YTDKYDNINLDEILANKRLLVAYVNCVMERGKCSPEGKELKEHLQDAIENGCKKCTENQE 63
Query: 128 EGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYDAQLKA 168
           +GA ++ + LI+ + E W+ L  KYDP+G+++ KY+ + KA
Sbjct: 64  KGAYRVIEHLIKNEIEIWRELTAKYDPTGNWRKKYEDRAKA 104

>pdb|2JNT|A Chain A, Structure Of Bombyx Mori Chemosensory Protein 1 In Solution Length = 108

Iteration: 1
 Score = 90.1 bits (222), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 64/101 (63%)
Query: 68  YTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKVLPDAIATECGGCSDKQK 127
           YT KYD ++L EI+ N RL  +Y  C++  G C+P+G ELK  L +A+ T C  C++ Q+
Sbjct: 1   YTDKYDKINLQEILENKRLLESYMDCVLGKGKCTPEGKELKDHLQEALETGCEKCTEAQE 60
Query: 128 EGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYDAQLKA 168
           +GA+    +LI+ + E WK L   +DP G ++ KY+ + KA
Sbjct: 61  KGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKYEDRAKA 101

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	169
1k19_A	112	Chemosensory protein CSP2; pheromone, lipid transp	2e-45
1k19_A	112	Chemosensory protein CSP2; pheromone, lipid transp	8e-08
2gvs_A	109	Chemosensory protein CSP-SG4; alpha-coil, lipid bi	4e-43
2gvs_A	109	Chemosensory protein CSP-SG4; alpha-coil, lipid bi	2e-06

>1k19_A Chemosensory protein CSP2; pheromone, lipid transport; NMR {Mamestra brassicae} SCOP: a.118.21.1 PDB: 1kx8_A 1kx9_A 1n8u_A* 1n8v_A* 2jnt_A Length = 112

 Score =  144 bits (364), Expect = 2e-45
 Identities = 48/101 (47%), Positives = 71/101 (70%)

Query: 68  YTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKVLPDAIATECGGCSDKQK 127
           YT KYDN++LDEI+AN RL   Y  C+M+ G CSP+G ELK+ L DAI   C  C++ Q+
Sbjct: 4   YTDKYDNINLDEILANKRLLVAYVNCVMERGKCSPEGKELKEHLQDAIENGCKKCTENQE 63

Query: 128 EGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYDAQLKA 168
           +GA ++ + LI+ + E W+ L  KYDP+G+++ KY+ + KA
Sbjct: 64  KGAYRVIEHLIKNEIEIWRELTAKYDPTGNWRKKYEDRAKA 104

>1k19_A Chemosensory protein CSP2; pheromone, lipid transport; NMR {Mamestra brassicae} SCOP: a.118.21.1 PDB: 1kx8_A 1kx9_A 1n8u_A* 1n8v_A* 2jnt_A Length = 112

 Score = 47.2 bits (112), Expect = 8e-08
 Identities = 18/34 (52%), Positives = 24/34 (70%)

Query: 5  VDEIIANDRLFSNYYKCLMDTGACSPDGAELKMN 38
          +DEI+AN RL   Y  C+M+ G CSP+G ELK +
Sbjct: 13 LDEILANKRLLVAYVNCVMERGKCSPEGKELKEH 46

>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria} Length = 109

 Score =  138 bits (348), Expect = 4e-43
 Identities = 58/104 (55%), Positives = 74/104 (71%), Gaps = 2/104 (1%)

Query: 68  YTTKYDNVDLDEIIANDRLFTNYYKCLM--DTGACSPDGAELKKVLPDAIATECGGCSDK 125
           YTTKYDNV+LDEI+ANDRL   Y +CL+  D   C+ DG ELK V+PDA++ EC  C++K
Sbjct: 4   YTTKYDNVNLDEILANDRLLNKYVQCLLEDDESNCTADGKELKSVIPDALSNECAKCNEK 63

Query: 126 QKEGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYDAQLKAL 169
           QKEG KK+ K LI  KP+ W  L+ KYDP G+Y  KY+ + K L
Sbjct: 64  QKEGTKKVLKHLINHKPDVWAQLKAKYDPDGTYSKKYEDREKEL 107

>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria} Length = 109

 Score = 43.7 bits (103), Expect = 2e-06
 Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 2/36 (5%)

Query: 5  VDEIIANDRLFSNYYKCLM--DTGACSPDGAELKMN 38
          +DEI+ANDRL + Y +CL+  D   C+ DG ELK  
Sbjct: 13 LDEILANDRLLNKYVQCLLEDDESNCTADGKELKSV 48

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	169
2gvs_A	109	Chemosensory protein CSP-SG4; alpha-coil, lipid bi	100.0
1k19_A	112	Chemosensory protein CSP2; pheromone, lipid transp	100.0
1k19_A	112	Chemosensory protein CSP2; pheromone, lipid transp	99.53
2gvs_A	109	Chemosensory protein CSP-SG4; alpha-coil, lipid bi	99.5

>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria}

Probab=100.00  E-value=2.2e-49  Score=297.61  Aligned_cols=105  Identities=54%  Similarity=1.052  Sum_probs=101.8

Q ss_pred             CCccCCcCccCCHHHHhcCHHHHHHHhhccccCC--CCChhHHHHHHHHHHHHhhcCCCCCHHHHhhHHHHHHHHHhcCh
Q psy13420         65 SPAYTTKYDNVDLDEIIANDRLFTNYYKCLMDTG--ACSPDGAELKKVLPDAIATECGGCSDKQKEGAKKIFKFLIEKKP  142 (169)
Q Consensus        65 ~e~Y~~~yDniDid~iL~N~rl~~~y~~Clld~g--pCt~~g~~lK~~lPeal~t~C~KCt~kQK~~~~kvi~~l~~~~P  142 (169)
                      +++|+++||||||++||+|+||+++|++||||+|  ||||+|++||++|||||+|+|+||||+||+++++|++||++|+|
T Consensus         1 ee~Yt~kyDniDvd~IL~n~rll~~y~~Clld~g~~pCtpegk~lK~~lpeAl~t~C~KCTekQK~~~~kvi~~l~~n~P   80 (109)
T 2gvs_A            1 EEKYTTKYDNVNLDEILANDRLLNKYVQCLLEDDESNCTADGKELKSVIPDALSNECAKCNEKQKEGTKKVLKHLINHKP   80 (109)
T ss_dssp             CCCCCSCSSSCCHHHHHHCHHHHHHHHHHHHSSCCTTCCTTHHHHHHHTTHHHHSTTTTSCHHHHHHHHHHHHHHHHHCH
T ss_pred             CCcccccccccCHHHHHcCHHHHHHHHhHHhcCCCCCCCHHHHHHHHHhHHHHhccCCCCCHHHHHHHHHHHHHHHHcCh
Confidence            3579999999999999999999999999999999  99999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhCCCchhHHHHHHHHhhC
Q psy13420        143 EEWKALEGKYDPSGSYKAKYDAQLKAL  169 (169)
Q Consensus       143 ~~w~~l~~KyDP~~~y~~~~~~~~~~~  169 (169)
                      ++|++|++||||+|+|+++|+++++++
T Consensus        81 ~~W~~L~~KyDP~g~y~~ky~~~~~~~  107 (109)
T 2gvs_A           81 DVWAQLKAKYDPDGTYSKKYEDREKEL  107 (109)
T ss_dssp             HHHHHHHHHHCTTCTTTHHHHTTTCCS
T ss_pred             HHHHHHHHHHCCCchHHHHHHHHHHHc
Confidence            999999999999999999999987653

>1k19_A Chemosensory protein CSP2; pheromone, lipid transport; NMR {Mamestra brassicae} SCOP: a.118.21.1 PDB: 1kx8_A 1kx9_A 1n8u_A* 1n8v_A* 2jnt_A

Probab=100.00  E-value=1.6e-49  Score=299.63  Aligned_cols=104  Identities=46%  Similarity=0.940  Sum_probs=101.4

Q ss_pred             CCccCCcCccCCHHHHhcCHHHHHHHhhccccCCCCChhHHHHHHHHHHHHhhcCCCCCHHHHhhHHHHHHHHHhcChHH
Q psy13420         65 SPAYTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKVLPDAIATECGGCSDKQKEGAKKIFKFLIEKKPEE  144 (169)
Q Consensus        65 ~e~Y~~~yDniDid~iL~N~rl~~~y~~Clld~gpCt~~g~~lK~~lPeal~t~C~KCt~kQK~~~~kvi~~l~~~~P~~  144 (169)
                      +++|+++||||||++||+|+||+++|++||||+|||||+|++||++|||||+|+|+||||+||+++++|++||++|+|++
T Consensus         1 ee~Yt~kyDniDvd~IL~n~rll~~y~~Clld~gpCtpegk~lK~~lpeAl~t~C~KCTekQK~~~~kvi~~l~~n~P~~   80 (112)
T 1k19_A            1 EDKYTDKYDNINLDEILANKRLLVAYVNCVMERGKCSPEGKELKEHLQDAIENGCKKCTENQEKGAYRVIEHLIKNEIEI   80 (112)
T ss_dssp             CCCCCSSSSCSSHHHHHSCHHHHHHHHHHHTTCSSSHHHHHHHHHHHHHHTTTTCTTSCSHHHHHHHHHHHHHHHHHSCH
T ss_pred             CCcccccccccCHHHHHcCHHHHHHHHhHHhcCCCCCHHHHHHHHHhHHHHhccCCCCCHHHHHHHHHHHHHHHHcChHH
Confidence            35799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhCCCchhHHHHHHHHhh
Q psy13420        145 WKALEGKYDPSGSYKAKYDAQLKA  168 (169)
Q Consensus       145 w~~l~~KyDP~~~y~~~~~~~~~~  168 (169)
                      |++|++||||+|+|+++|++++++
T Consensus        81 W~~L~~KyDP~g~y~~~y~~~~~~  104 (112)
T 1k19_A           81 WRELTAKYDPTGNWRKKYEDRAKA  104 (112)
T ss_dssp             HHHHHHSSTTTCSSHHHHHHHHHH
T ss_pred             HHHHHHHHCCCchHHHHHHHHHHH
Confidence            999999999999999999999864

>1k19_A Chemosensory protein CSP2; pheromone, lipid transport; NMR {Mamestra brassicae} SCOP: a.118.21.1 PDB: 1kx8_A 1kx9_A 1n8u_A* 1n8v_A* 2jnt_A

Probab=99.53  E-value=4.7e-15  Score=111.49  Aligned_cols=53  Identities=36%  Similarity=0.619  Sum_probs=48.6

Q ss_pred             CCCHHHHhcCHHhHHHHhccccCCCCCCcchHhhhhc-----------cCchhHHHHHHHHHHH
Q psy13420          2 RVCVDEIIANDRLFSNYYKCLMDTGACSPDGAELKMN-----------NSSNTIIMFKSLVLVA   54 (169)
Q Consensus         2 ~idv~~Il~n~rl~~~y~~C~l~~gpCt~e~~~lk~~-----------~~s~~~~~MK~~~~l~   54 (169)
                      ||||++||+|+||+++|++|||++|||||+|++||++           ||+.|.-+++.++-.+
T Consensus        10 niDvd~IL~n~rll~~y~~Clld~gpCtpegk~lK~~lpeAl~t~C~KCTekQK~~~~kvi~~l   73 (112)
T 1k19_A           10 NINLDEILANKRLLVAYVNCVMERGKCSPEGKELKEHLQDAIENGCKKCTENQEKGAYRVIEHL   73 (112)
T ss_dssp             CSSHHHHHSCHHHHHHHHHHHTTCSSSHHHHHHHHHHHHHHTTTTCTTSCSHHHHHHHHHHHHH
T ss_pred             ccCHHHHHcCHHHHHHHHhHHhcCCCCCHHHHHHHHHhHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence            7999999999999999999999999999999999999           8888988888876443

>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria}

Probab=99.50  E-value=1.7e-14  Score=107.94  Aligned_cols=53  Identities=36%  Similarity=0.590  Sum_probs=47.6

Q ss_pred             CCCHHHHhcCHHhHHHHhccccCCC--CCCcchHhhhhc-----------cCchhHHHHHHHHHHH
Q psy13420          2 RVCVDEIIANDRLFSNYYKCLMDTG--ACSPDGAELKMN-----------NSSNTIIMFKSLVLVA   54 (169)
Q Consensus         2 ~idv~~Il~n~rl~~~y~~C~l~~g--pCt~e~~~lk~~-----------~~s~~~~~MK~~~~l~   54 (169)
                      ||||++||+|+||+++|++|||++|  ||||+|++||++           ||+.|.-+++.++-.+
T Consensus        10 niDvd~IL~n~rll~~y~~Clld~g~~pCtpegk~lK~~lpeAl~t~C~KCTekQK~~~~kvi~~l   75 (109)
T 2gvs_A           10 NVNLDEILANDRLLNKYVQCLLEDDESNCTADGKELKSVIPDALSNECAKCNEKQKEGTKKVLKHL   75 (109)
T ss_dssp             SCCHHHHHHCHHHHHHHHHHHHSSCCTTCCTTHHHHHHHTTHHHHSTTTTSCHHHHHHHHHHHHHH
T ss_pred             ccCHHHHHcCHHHHHHHHhHHhcCCCCCCCHHHHHHHHHhHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence            7999999999999999999999999  999999999999           7777888877776433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	169
d1n8va_	101	a.118.21.1 (A:) Chemosensory protein Csp2 {Cabbage	2e-50
d1n8va_	101	a.118.21.1 (A:) Chemosensory protein Csp2 {Cabbage	2e-10

>d1n8va_ a.118.21.1 (A:) Chemosensory protein Csp2 {Cabbage moth (Mamestra brassicae) [TaxId: 55057]} Length = 101

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Chemosensory protein Csp2
family: Chemosensory protein Csp2
domain: Chemosensory protein Csp2
species: Cabbage moth (Mamestra brassicae) [TaxId: 55057]

 Score =  155 bits (393), Expect = 2e-50
 Identities = 47/100 (47%), Positives = 70/100 (70%)

Query: 68  YTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKVLPDAIATECGGCSDKQK 127
           YT KYDN++LDEI+AN RL   Y  C+M+ G CSP+G ELK+ L DAI   C  C++ Q+
Sbjct: 2   YTDKYDNINLDEILANKRLLVAYVNCVMERGKCSPEGKELKEHLQDAIENGCKKCTENQE 61

Query: 128 EGAKKIFKFLIEKKPEEWKALEGKYDPSGSYKAKYDAQLK 167
           +GA ++ + LI+ + E W+ L  KYDP+G+++ KY+ + K
Sbjct: 62  KGAYRVIEHLIKNEIEIWRELTAKYDPTGNWRKKYEDRAK 101

>d1n8va_ a.118.21.1 (A:) Chemosensory protein Csp2 {Cabbage moth (Mamestra brassicae) [TaxId: 55057]} Length = 101

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Chemosensory protein Csp2
family: Chemosensory protein Csp2
domain: Chemosensory protein Csp2
species: Cabbage moth (Mamestra brassicae) [TaxId: 55057]

 Score = 53.1 bits (128), Expect = 2e-10
 Identities = 18/32 (56%), Positives = 23/32 (71%)

Query: 5  VDEIIANDRLFSNYYKCLMDTGACSPDGAELK 36
          +DEI+AN RL   Y  C+M+ G CSP+G ELK
Sbjct: 11 LDEILANKRLLVAYVNCVMERGKCSPEGKELK 42

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	169
d1n8va_	101	Chemosensory protein Csp2 {Cabbage moth (Mamestra	100.0
d1n8va_	101	Chemosensory protein Csp2 {Cabbage moth (Mamestra	99.53

>d1n8va_ a.118.21.1 (A:) Chemosensory protein Csp2 {Cabbage moth (Mamestra brassicae) [TaxId: 55057]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Chemosensory protein Csp2
family: Chemosensory protein Csp2
domain: Chemosensory protein Csp2
species: Cabbage moth (Mamestra brassicae) [TaxId: 55057]

Probab=100.00  E-value=3.1e-49  Score=291.59  Aligned_cols=101  Identities=47%  Similarity=0.962  Sum_probs=99.0

Q ss_pred             ccCCcCccCCHHHHhcCHHHHHHHhhccccCCCCChhHHHHHHHHHHHHhhcCCCCCHHHHhhHHHHHHHHHhcChHHHH
Q psy13420         67 AYTTKYDNVDLDEIIANDRLFTNYYKCLMDTGACSPDGAELKKVLPDAIATECGGCSDKQKEGAKKIFKFLIEKKPEEWK  146 (169)
Q Consensus        67 ~Y~~~yDniDid~iL~N~rl~~~y~~Clld~gpCt~~g~~lK~~lPeal~t~C~KCt~kQK~~~~kvi~~l~~~~P~~w~  146 (169)
                      +|+++||||||++||+|+|++++|++||||+|||||+|++||++|||||+|+|+||||+||+++++|++||++|+|++|+
T Consensus         1 kY~~~yD~iDvd~IL~n~rll~~y~~Clld~gpCt~egk~lK~~lPeal~t~C~kCT~kQK~~~~kvi~~l~~~~p~~w~   80 (101)
T d1n8va_           1 KYTDKYDNINLDEILANKRLLVAYVNCVMERGKCSPEGKELKEHLQDAIENGCKKCTENQEKGAYRVIEHLIKNEIEIWR   80 (101)
T ss_dssp             CCCCTTTTSCHHHHHTCHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred             CCCCcccccCHHHHHCCHHHHHHHHhHHccCCCCCHHHHHHHHHhHHHHHccccCCCHHHHHHHHHHHHHHHHcCcHHHH
Confidence            59999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhCCCchhHHHHHHHHh
Q psy13420        147 ALEGKYDPSGSYKAKYDAQLK  167 (169)
Q Consensus       147 ~l~~KyDP~~~y~~~~~~~~~  167 (169)
                      +|++||||+|+|+++|++.++
T Consensus        81 ~l~~KYDP~g~y~~k~~~~~k  101 (101)
T d1n8va_          81 ELTAKYDPTGNWRKKYEDRAK  101 (101)
T ss_dssp             HHHHHHCTTCSSHHHHHHHHC
T ss_pred             HHHHHHCcCchHHHHHHHHhC
Confidence            999999999999999998763

>d1n8va_ a.118.21.1 (A:) Chemosensory protein Csp2 {Cabbage moth (Mamestra brassicae) [TaxId: 55057]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Chemosensory protein Csp2
family: Chemosensory protein Csp2
domain: Chemosensory protein Csp2
species: Cabbage moth (Mamestra brassicae) [TaxId: 55057]

Probab=99.53  E-value=3.2e-15  Score=108.80  Aligned_cols=52  Identities=37%  Similarity=0.638  Sum_probs=47.3

Q ss_pred             CCCHHHHhcCHHhHHHHhccccCCCCCCcchHhhhhc-----------cCchhHHHHHHHHHH
Q psy13420          2 RVCVDEIIANDRLFSNYYKCLMDTGACSPDGAELKMN-----------NSSNTIIMFKSLVLV   53 (169)
Q Consensus         2 ~idv~~Il~n~rl~~~y~~C~l~~gpCt~e~~~lk~~-----------~~s~~~~~MK~~~~l   53 (169)
                      +|||++||+|+|++++|++|||++|||||+|++||++           ||+.|.-.++-++-.
T Consensus         8 ~iDvd~IL~n~rll~~y~~Clld~gpCt~egk~lK~~lPeal~t~C~kCT~kQK~~~~kvi~~   70 (101)
T d1n8va_           8 NINLDEILANKRLLVAYVNCVMERGKCSPEGKELKEHLQDAIENGCKKCTENQEKGAYRVIEH   70 (101)
T ss_dssp             TSCHHHHHTCHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHH
T ss_pred             ccCHHHHHCCHHHHHHHHhHHccCCCCCHHHHHHHHHhHHHHHccccCCCHHHHHHHHHHHHH
Confidence            7999999999999999999999999999999999999           788888877777543