Psyllid ID: psy13600


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180------
MSTSDFRQRFDAVPTHSRRPPSTETVHCLDNIDSPLHLVDGTLIDGVDYVFQNQPLKITKLDVGDHTENDQTDAEKTVNEVMKDIVTNKTSILDEDTKSSLTPDEGNVRRMHTAVKLNEVIVNKSHEAQLVILNLPGPPKETNIERESNYMEFLEVLTEGLERVLMVRGSNSSHHCYRYLFCGSMA
ccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccHHHHHHHHHHHHcccccEEEEEcccccccccHHHHHcccc
ccccHHHHHHccccccccccccccccccccccccccEEEEcEEccccEEEEcccccEEEEcccccccccccccccccccHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccHHHHHHHHHHHcccccEEEEEcccccHHHHHHHcccccc
mstsdfrqrfdavpthsrrppstetvhcldnidsplhlvdgtlidgvdyvfqnqplkitkldvgdhtendqtdAEKTVNEVMKDIVTNktsildedtkssltpdegnvrRMHTAVKLNEVIVNKSHEAQLVIlnlpgppketnierESNYMEFLEVLTEGLERVLMvrgsnsshhcyrylfcgsma
mstsdfrqrfdavpthsrrppstetvHCLDNIDSPLHLVDGTLIDGVDYVFQNQPLKitkldvgdhtendqtdaektvneVMKDIVtnktsildedtkssltpdegnvrRMHTAVKLNEVIVNKSHEAQLVIlnlpgppketnIERESNYMEFLEVLTEGLERVLMVrgsnsshhcyrYLFCGSMA
MSTSDFRQRFDAVPTHSRRPPSTETVHCLDNIDSPLHLVDGTLIDGVDYVFQNQPLKITKLDVGDHTENDQTDAEKTVNEVMKDIVTNKTSILDEDTKSSLTPDEGNVRRMHTAVKLNEVIVNKSHEAQLVILNLPGPPKETNIERESNYMEFLEVLTEGLERVLMVRGSNSSHHCYRYLFCGSMA
*************************VHCLDNIDSPLHLVDGTLIDGVDYVFQNQPLKITKLDV************************************************HTAVKLNEVIVNKSHEAQLVILNLP***********SNYMEFLEVLTEGLERVLMVRGSNSSHHCYRYLFCG***
************************************************************************************************************RRMHTAVKLNEVIVNKSHEAQLVILNLPGPPKETNIERESNYMEFLEVLTEGLERVLMVRGSNSSHHCYRYLFCGSMA
************************TVHCLDNIDSPLHLVDGTLIDGVDYVFQNQPLKITKLDVGDHTENDQTDAEKTVNEVMKDIVTNKTSILDEDTKSSLTPDEGNVRRMHTAVKLNEVIVNKSHEAQLVILNLPGPPKETNIERESNYMEFLEVLTEGLERVLMVRGSNSSHHCYRYLFCGSMA
*************P*H********TVHCLDNIDSPLHLVDGTLIDGVDYVFQNQPLKITKLD***********************************KSSLTPDEGNVRRMHTAVKLNEVIVNKSHEAQLVILNLPGPPKETNIERESNYMEFLEVLTEGLERVLMVRGSNSSHHCYRYLFCGSM*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSTSDFRQRFDAVPTHSRRPPSTETVHCLDNIDSPLHLVDGTLIDGVDYVFQNQPLKITKLDVGDHTENDQTDAEKTVNEVMKDIVTNKTSILDEDTKSSLTPDEGNVRRMHTAVKLNEVIVNKSHEAQLVILNLPGPPKETNIERESNYMEFLEVLTEGLERVLMVRGSNSSHHCYRYLFCGSMA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query186 2.2.26 [Sep-21-2011]
Q9UHW91150 Solute carrier family 12 yes N/A 0.634 0.102 0.523 2e-26
Q924N41150 Solute carrier family 12 yes N/A 0.381 0.061 0.753 2e-26
Q636321085 Solute carrier family 12 no N/A 0.360 0.061 0.753 9e-25
Q286771085 Solute carrier family 12 no N/A 0.360 0.061 0.753 9e-25
Q9JIS81085 Solute carrier family 12 no N/A 0.360 0.061 0.753 9e-25
Q9UP951085 Solute carrier family 12 no N/A 0.360 0.061 0.739 2e-24
Q9Y6661083 Solute carrier family 12 no N/A 0.365 0.062 0.714 2e-23
Q5RK271083 Solute carrier family 12 no N/A 0.365 0.062 0.714 4e-23
Q9WVL31083 Solute carrier family 12 no N/A 0.365 0.062 0.714 4e-23
Q7YRU61106 Solute carrier family 12 no N/A 0.365 0.061 0.685 4e-22
>sp|Q9UHW9|S12A6_HUMAN Solute carrier family 12 member 6 OS=Homo sapiens GN=SLC12A6 PE=1 SV=2 Back     alignment and function desciption
 Score =  118 bits (296), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 66/126 (52%), Positives = 83/126 (65%), Gaps = 8/126 (6%)

Query: 52   QNQPLKITKLDVGDHTENDQTDAEK-----TVNEVMKDIVTNKTSILDEDTKSSLTPDEG 106
            +N  L++T +   D  E  +T  EK     T ++ M        S+       ++ PD+ 
Sbjct: 1021 RNSMLRLTSIG-SDEDEETETYQEKVHMTWTKDKYMASRGQKAKSMEGFQDLLNMRPDQS 1079

Query: 107  NVRRMHTAVKLNEVIVNKSHEAQLVILNLPGPPKETNIERESNYMEFLEVLTEGLERVLM 166
            NVRRMHTAVKLNEVIVNKSHEA+LV+LN+PGPP+  N E + NYMEFLEVLTEGLERVL+
Sbjct: 1080 NVRRMHTAVKLNEVIVNKSHEAKLVLLNMPGPPR--NPEGDENYMEFLEVLTEGLERVLL 1137

Query: 167  VRGSNS 172
            VRG  S
Sbjct: 1138 VRGGGS 1143




Mediates electroneutral potassium-chloride cotransport. May be activated by cell swelling. May contribute to cell volume homeostasis in single cells.
Homo sapiens (taxid: 9606)
>sp|Q924N4|S12A6_MOUSE Solute carrier family 12 member 6 OS=Mus musculus GN=Slc12a6 PE=1 SV=2 Back     alignment and function description
>sp|Q63632|S12A4_RAT Solute carrier family 12 member 4 OS=Rattus norvegicus GN=Slc12a4 PE=1 SV=1 Back     alignment and function description
>sp|Q28677|S12A4_RABIT Solute carrier family 12 member 4 OS=Oryctolagus cuniculus GN=SLC12A4 PE=1 SV=1 Back     alignment and function description
>sp|Q9JIS8|S12A4_MOUSE Solute carrier family 12 member 4 OS=Mus musculus GN=Slc12a4 PE=1 SV=2 Back     alignment and function description
>sp|Q9UP95|S12A4_HUMAN Solute carrier family 12 member 4 OS=Homo sapiens GN=SLC12A4 PE=1 SV=2 Back     alignment and function description
>sp|Q9Y666|S12A7_HUMAN Solute carrier family 12 member 7 OS=Homo sapiens GN=SLC12A7 PE=1 SV=3 Back     alignment and function description
>sp|Q5RK27|S12A7_RAT Solute carrier family 12 member 7 OS=Rattus norvegicus GN=Slc12a7 PE=2 SV=2 Back     alignment and function description
>sp|Q9WVL3|S12A7_MOUSE Solute carrier family 12 member 7 OS=Mus musculus GN=Slc12a7 PE=1 SV=1 Back     alignment and function description
>sp|Q7YRU6|S12A7_RABIT Solute carrier family 12 member 7 OS=Oryctolagus cuniculus GN=SLC12A7 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query186
270014766 1032 hypothetical protein TcasGA2_TC005178 [T 0.618 0.111 0.638 4e-35
118789729 898 AGAP011498-PA [Anopheles gambiae str. PE 0.629 0.130 0.604 5e-34
157130548 1043 potassium/chloride symporter, putative [ 0.564 0.100 0.654 2e-32
170054156 952 potassium/chloride symporter [Culex quin 0.408 0.079 0.881 2e-32
242008234 1034 conserved hypothetical protein [Pediculu 0.408 0.073 0.868 2e-32
306478629 1096 SLC12-like K,Cl cotransporter [Aedes aeg 0.392 0.066 0.890 5e-32
157132044135 hypothetical protein AaeL_AAEL012335 [Ae 0.397 0.548 0.878 6e-31
195028350 1066 GH20188 [Drosophila grimshawi] gi|193903 0.564 0.098 0.606 9e-31
194754307 1058 GF12875 [Drosophila ananassae] gi|190620 0.510 0.089 0.69 5e-30
350417392 1135 PREDICTED: solute carrier family 12 memb 0.403 0.066 0.813 7e-30
>gi|270014766|gb|EFA11214.1| hypothetical protein TcasGA2_TC005178 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 76/119 (63%), Positives = 93/119 (78%), Gaps = 4/119 (3%)

Query: 52   QNQPLKITKLDVGDHTENDQTD-AEKTVNEVMKDIVTNKTSILDEDTKSSLTPDEGNVRR 110
            + +P   TK +  D++  ++ D +EK  NE  K+   N  S  ++   +++TPDEGNVRR
Sbjct: 907  ETEPTNETKPEDNDNSTTEKEDPSEKECNEETKE---NNISSEEKKKPATITPDEGNVRR 963

Query: 111  MHTAVKLNEVIVNKSHEAQLVILNLPGPPKETNIERESNYMEFLEVLTEGLERVLMVRG 169
            MHTAVKLNEVIVN+SHEAQLVILNLPGPPK+T +ERESNYMEFLEVLTEGLERVLMVRG
Sbjct: 964  MHTAVKLNEVIVNRSHEAQLVILNLPGPPKDTKMERESNYMEFLEVLTEGLERVLMVRG 1022




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|118789729|ref|XP_317803.3| AGAP011498-PA [Anopheles gambiae str. PEST] gi|116122711|gb|EAA13082.4| AGAP011498-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|157130548|ref|XP_001655744.1| potassium/chloride symporter, putative [Aedes aegypti] gi|108871879|gb|EAT36104.1| AAEL011792-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|170054156|ref|XP_001862998.1| potassium/chloride symporter [Culex quinquefasciatus] gi|167874518|gb|EDS37901.1| potassium/chloride symporter [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|242008234|ref|XP_002424915.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212508503|gb|EEB12177.1| conserved hypothetical protein [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|306478629|gb|ADM89630.1| SLC12-like K,Cl cotransporter [Aedes aegypti] Back     alignment and taxonomy information
>gi|157132044|ref|XP_001662435.1| hypothetical protein AaeL_AAEL012335 [Aedes aegypti] gi|108871275|gb|EAT35500.1| AAEL012335-PA, partial [Aedes aegypti] Back     alignment and taxonomy information
>gi|195028350|ref|XP_001987039.1| GH20188 [Drosophila grimshawi] gi|193903039|gb|EDW01906.1| GH20188 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|194754307|ref|XP_001959437.1| GF12875 [Drosophila ananassae] gi|190620735|gb|EDV36259.1| GF12875 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|350417392|ref|XP_003491400.1| PREDICTED: solute carrier family 12 member 6-like [Bombus impatiens] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query186
FB|FBgn02617941074 kcc "kazachoc" [Drosophila mel 0.682 0.118 0.573 6.5e-28
UNIPROTKB|B3KXX3962 SLC12A6 "cDNA FLJ46254 fis, cl 0.634 0.122 0.523 3.8e-24
UNIPROTKB|F1N2X11150 SLC12A6 "Uncharacterized prote 0.639 0.103 0.528 4e-24
UNIPROTKB|F1SCL61152 F1SCL6 "Uncharacterized protei 0.639 0.103 0.528 4e-24
UNIPROTKB|Q9UHW91150 SLC12A6 "Solute carrier family 0.634 0.102 0.523 5.1e-24
UNIPROTKB|F1Q2J31151 SLC12A6 "Uncharacterized prote 0.634 0.102 0.523 5.1e-24
UNIPROTKB|G3V6N71150 Slc12a6 "RCG27287, isoform CRA 0.634 0.102 0.523 6.5e-24
UNIPROTKB|E1BCI81086 SLC12A4 "Uncharacterized prote 0.360 0.061 0.753 2.2e-23
MGI|MGI:13094651085 Slc12a4 "solute carrier family 0.360 0.061 0.753 3.5e-23
RGD|36871085 Slc12a4 "solute carrier family 0.360 0.061 0.753 3.5e-23
FB|FBgn0261794 kcc "kazachoc" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 324 (119.1 bits), Expect = 6.5e-28, P = 6.5e-28
 Identities = 78/136 (57%), Positives = 90/136 (66%)

Query:    34 SPLHLVDGTLIDGVDYVFQNQPLKITKLDVGDHTENDQTDAEKTVNEVMKDIVTNKTSIL 93
             S +   D T+ +   +  QN   K   +D+ D  EN  T  E T N   KD  T K    
Sbjct:   938 SKVRFADPTIEETQHHDSQNDE-KRNSIDL-DGPENADTP-ETTSN---KDESTEKA--- 988

Query:    94 DEDTKSSLTPDEGNVRRMHTAVKLNEVIVNKSHEAQLVILNLPGPPKETNIERESNYMEF 153
             D D KSS+ PDE NVRRMHTA+KLNEVIV KS +AQLVI+NLPGPP+E   ERE NYMEF
Sbjct:   989 DGDFKSSVKPDEFNVRRMHTAIKLNEVIVEKSQDAQLVIMNLPGPPREVRAERERNYMEF 1048

Query:   154 LEVLTEGLERVLMVRG 169
             LEVLTEGLE+VLMVRG
Sbjct:  1049 LEVLTEGLEKVLMVRG 1064




GO:0015379 "potassium:chloride symporter activity" evidence=ISS;IDA
GO:0006810 "transport" evidence=ISS
GO:0016021 "integral to membrane" evidence=ISS
GO:0009612 "response to mechanical stimulus" evidence=IMP
GO:0007638 "mechanosensory behavior" evidence=IMP
GO:0003333 "amino acid transmembrane transport" evidence=ISS
GO:0015171 "amino acid transmembrane transporter activity" evidence=ISS
UNIPROTKB|B3KXX3 SLC12A6 "cDNA FLJ46254 fis, clone TESTI4023096, highly similar to Solute carrier family 12 member 6" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1N2X1 SLC12A6 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SCL6 F1SCL6 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q9UHW9 SLC12A6 "Solute carrier family 12 member 6" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q2J3 SLC12A6 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|G3V6N7 Slc12a6 "RCG27287, isoform CRA_a" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E1BCI8 SLC12A4 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1309465 Slc12a4 "solute carrier family 12, member 4" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|3687 Slc12a4 "solute carrier family 12 (potassium/chloride transporters), member 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9UHW9S12A6_HUMANNo assigned EC number0.52380.63440.1026yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query186
TIGR00930953 TIGR00930, 2a30, K-Cl cotransporter 3e-26
>gnl|CDD|233194 TIGR00930, 2a30, K-Cl cotransporter Back     alignment and domain information
 Score =  104 bits (260), Expect = 3e-26
 Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 12/121 (9%)

Query: 63  VGDHTENDQTDAEKTVNEVMKDIVTNKTSILDEDTKSSLTPD----------EGNVRRMH 112
           + D     QT++ +   E+++    +KT    E     +T            + NVR+ +
Sbjct: 829 LMDINAKPQTESMEAFEEMIRPFRLHKTEKDREAKDPKMTWTKPWKITDAELQSNVRKSY 888

Query: 113 TAVKLNEVIVNKSHEAQLVILNLPGPPKETNIERESNYMEFLEVLTEGLERVLMVRGSNS 172
             V+LNE+++  S +A LV+L+LP P K      +  YM +LEVL+E L  VL+VRG++ 
Sbjct: 889 RQVRLNELLLEYSRDAALVVLSLPVPRK--GSIPDELYMAWLEVLSEDLPPVLLVRGNHR 946

Query: 173 S 173
           +
Sbjct: 947 N 947


[Transport and binding proteins, Other]. Length = 953


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00