Psyllid ID: psy1367

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-
MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVIEETIEMNSKL
ccccccEEEEcccccHHHHHHHHHHHccccEEEEccccccccccccccccccEEEEEcccHHHHHHHHHHHHHccEEcccccccHHHHccccHHHHHHHcccEEEEEEEcccccccccccccHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEcccccEEEEEcccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHccHHHHHHHHccccccccccccHHHHHHcHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHccccHHHHHHHHHcccccccHHHcccc
ccccccEEEEHHHHcccHHHHHHHHHcccEEEEEEcccccccHHHHHHccccEEEEEcccHHHHHHHHHHHHHccEEEEcccccHHHHccccHHHHHHHcccEEEEEEEcccccccccccccHHHHHHHHHcHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEcccccEEEEEEccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHccHHHHHHHHHHccccccccccHHHHHccHHHHHcccEEEcccccccccccccccccccccccccccccccccHHHHHHHHcccHHHHHHHHHcccEcccccccccc
malkgitvlefaglapapfcgMILNEFGATViridkhgaqpfvqdtvgygkkSLCINLKKAKGLSVMKNLanqsdvilepFRKGVMEklqlgpdvlcksnprLIYARLsgygqdgpyssmaghdinyLGLSGILsllgwrnrnptppcnlaadfgggGLMCALGIVMALFersksgrgqvidcnmVEGSAylgswltrtqdtflwdkprgenlldggahfydtyetkdgrfMAVGALESQFYAQLLAGlgmteeelpqheveTGRAKLTEKFKEKTQAEWCEifdntdacvtpvlslsqatshphnvhrgsfipnragvvapapaprlsrtpgtskitehnpapgvhtrevlrhfgysdanIEELIREDVIEETIEMNSKL
MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPaprlsrtpgtskitehnpapgvhtreVLRHFGYSDANIEELIREDVIEETIEMNSKL
MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYlglsgilsllgWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVapapapRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVIEETIEMNSKL
***KGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMT**********************KTQAEWCEIFDNTDACVTPVLSL***************************************************REVLRHFGYSDANIEELIREDVI**********
MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQD************LDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPG*****E*NPAPGVHTREVLRHFGYSDANIEELIREDVI**********
MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVIEETIEMNSKL
**LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVIE*********
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVIEETIEMNSKL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query381 2.2.26 [Sep-21-2011]
O09174381 Alpha-methylacyl-CoA race yes N/A 0.968 0.968 0.553 1e-121
Q9UHK6382 Alpha-methylacyl-CoA race yes N/A 0.971 0.968 0.547 1e-120
P70473382 Alpha-methylacyl-CoA race yes N/A 0.971 0.968 0.563 1e-119
Q8J0F0383 Isopenicillin N epimerase N/A N/A 0.763 0.759 0.503 2e-81
Q09618340 CaiB/baiF CoA-transferase no N/A 0.832 0.932 0.406 9e-61
Q7TNE1436 CaiB/baiF CoA-transferase no N/A 0.942 0.823 0.290 2e-37
Q9HAC7445 CaiB/baiF CoA-transferase no N/A 0.939 0.804 0.280 3e-37
Q68FU4436 CaiB/baiF CoA-transferase no N/A 0.942 0.823 0.290 1e-36
Q139H7425 Formyl-coenzyme A transfe no N/A 0.937 0.84 0.258 4e-24
P76518381 Uncharacterized protein Y N/A N/A 0.866 0.866 0.267 5e-24
>sp|O09174|AMACR_MOUSE Alpha-methylacyl-CoA racemase OS=Mus musculus GN=Amacr PE=1 SV=4 Back     alignment and function desciption
 Score =  434 bits (1116), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/376 (55%), Positives = 275/376 (73%), Gaps = 7/376 (1%)

Query: 1   MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
           M L+G+ V+E AGLAP PFCGM+L +FGA V+R+++ G+    ++ +  GK+SL ++LK+
Sbjct: 1   MVLRGVRVVELAGLAPGPFCGMVLADFGAEVVRVNRLGSTG--ENFLARGKRSLALDLKR 58

Query: 61  AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
           ++G++V++ +  ++DV+LEPFR GVMEKLQLGP+ L + NP+LIYARLSG+GQ G +S +
Sbjct: 59  SQGVTVLRRMCARADVLLEPFRCGVMEKLQLGPETLLQDNPKLIYARLSGFGQSGIFSKV 118

Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
           AGHDINYL LSG+LS +G    NP PP NL ADFGGGGLMC LGIV+ALFER++SGRGQV
Sbjct: 119 AGHDINYLALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGIVLALFERTRSGRGQV 178

Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
           ID +MVEG+AYL S+L +TQ   LW +PRG+N+LDGGA FY TY+T DG FMAVGA+E Q
Sbjct: 179 IDSSMVEGTAYLSSFLWKTQPMGLWKQPRGQNILDGGAPFYTTYKTADGEFMAVGAIEPQ 238

Query: 241 FYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
           FYA LL GLG+  EELP           + K  + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 239 FYALLLKGLGLESEELPSQMSSADWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLT 298

Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
             +A  H HN  R SFI +   + +P PAP LSRTP      + +P+ G HT EVLR +G
Sbjct: 299 FEEALHHQHNRERASFITDGEQLPSPRPAPLLSRTPAVPS-AKRDPSVGEHTVEVLREYG 357

Query: 357 YSDANIEELIREDVIE 372
           +S   I +L  + ++E
Sbjct: 358 FSQEEILQLHSDRIVE 373
Racemization of 2-methyl-branched fatty acid CoA esters. Responsible for the conversion of pristanoyl-CoA and C27-bile acyl-CoAs to their (S)-stereoisomers.
Mus musculus (taxid: 10090)
EC: 5EC: .EC: 1EC: .EC: 9EC: 9EC: .EC: 4
>sp|Q9UHK6|AMACR_HUMAN Alpha-methylacyl-CoA racemase OS=Homo sapiens GN=AMACR PE=1 SV=2 Back     alignment and function description
>sp|P70473|AMACR_RAT Alpha-methylacyl-CoA racemase OS=Rattus norvegicus GN=Amacr PE=1 SV=3 Back     alignment and function description
>sp|Q8J0F0|CEFD2_ACRCH Isopenicillin N epimerase component 2 OS=Acremonium chrysogenum GN=cefD2 PE=3 SV=1 Back     alignment and function description
>sp|Q09618|YS74_CAEEL CaiB/baiF CoA-transferase family protein ZK892.4 OS=Caenorhabditis elegans GN=ZK892.4 PE=3 SV=3 Back     alignment and function description
>sp|Q7TNE1|CG010_MOUSE CaiB/baiF CoA-transferase family protein C7orf10 homolog OS=Mus musculus PE=2 SV=2 Back     alignment and function description
>sp|Q9HAC7|CG010_HUMAN CaiB/baiF CoA-transferase family protein C7orf10 OS=Homo sapiens GN=C7orf10 PE=1 SV=2 Back     alignment and function description
>sp|Q68FU4|CG010_RAT CaiB/baiF CoA-transferase family protein C7orf10 homolog OS=Rattus norvegicus PE=2 SV=1 Back     alignment and function description
>sp|Q139H7|FCTA_RHOPS Formyl-coenzyme A transferase OS=Rhodopseudomonas palustris (strain BisB5) GN=frc PE=3 SV=1 Back     alignment and function description
>sp|P76518|YFDE_ECOLI Uncharacterized protein YfdE OS=Escherichia coli (strain K12) GN=yfdE PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query381
156553316382 PREDICTED: alpha-methylacyl-CoA racemase 0.986 0.984 0.593 1e-130
383861208381 PREDICTED: alpha-methylacyl-CoA racemase 0.984 0.984 0.579 1e-126
340711797382 PREDICTED: alpha-methylacyl-CoA racemase 0.997 0.994 0.577 1e-124
350402425382 PREDICTED: alpha-methylacyl-CoA racemase 0.997 0.994 0.574 1e-124
307191560379 Alpha-methylacyl-CoA racemase [Harpegnat 0.973 0.978 0.601 1e-124
119913313382 PREDICTED: alpha-methylacyl-CoA racemase 0.971 0.968 0.569 1e-122
91083301378 PREDICTED: similar to alpha methylacyl-c 0.971 0.978 0.589 1e-122
56118274382 alpha-methylacyl-CoA racemase [Xenopus ( 0.950 0.947 0.583 1e-122
403290317382 PREDICTED: alpha-methylacyl-CoA racemase 0.971 0.968 0.561 1e-122
403290319384 PREDICTED: alpha-methylacyl-CoA racemase 0.971 0.963 0.561 1e-122
>gi|156553316|ref|XP_001600288.1| PREDICTED: alpha-methylacyl-CoA racemase-like isoform 1 [Nasonia vitripennis] gi|345483632|ref|XP_003424858.1| PREDICTED: alpha-methylacyl-CoA racemase-like isoform 2 [Nasonia vitripennis] Back     alignment and taxonomy information
 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 225/379 (59%), Positives = 284/379 (74%), Gaps = 3/379 (0%)

Query: 1   MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
           M+LKGI VLE AGLAPAPFCGM+L +FGA++IRID+ G+   +QD++G GK+S+ +NLK 
Sbjct: 1   MSLKGIKVLELAGLAPAPFCGMLLADFGASIIRIDRPGSNSQIQDSLGNGKRSIALNLKS 60

Query: 61  AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
            KG+ V K L+N+ DV+++P+RKGVMEKL+LGP  L KSN +LIYARL+G+GQDGPY+ M
Sbjct: 61  KKGVDVFKRLSNRCDVLIDPYRKGVMEKLKLGPADLMKSNKKLIYARLTGFGQDGPYAEM 120

Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
           AGHDINY+GLSG+LSL G  N  PTPP N AADF GGGLMCA GI MAL ER++S +GQV
Sbjct: 121 AGHDINYVGLSGLLSLFGRHNEKPTPPSNFAADFAGGGLMCAFGIAMALLERNESKKGQV 180

Query: 181 IDCNMVEGSAYLGSWLTRTQDT-FLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
           ID +M EG+AYLGSW  R+++   LW +PRG+NLLD GAHFYDTYETKDG +MAVGALES
Sbjct: 181 IDASMTEGTAYLGSWFYRSRNLPGLWTEPRGKNLLDTGAHFYDTYETKDGHYMAVGALES 240

Query: 240 QFYAQLLAGLGMTEEELPQHE-VETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
           QFY   L  LG+TE+EL   +  E  R KL++ FK KTQ EWC IFD TDACVTPVL+L 
Sbjct: 241 QFYDIFLDKLGLTEDELLHFDNFEENREKLSDIFKSKTQDEWCSIFDGTDACVTPVLTLD 300

Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEH-NPAPGVHTREVLRHFGY 357
              SH HN +  +F   R  +V P  AP+LSRTPG S  T   N  PG HT E+L  + +
Sbjct: 301 NVASHKHNDYSKTFSIGRDNLVIPNVAPKLSRTPGVSCATRFPNTNPGEHTIEILTEYKF 360

Query: 358 SDANIEELIREDVIEETIE 376
           +   I++LI  +++E+T +
Sbjct: 361 TSKEIKDLIDNNIVEQTTK 379

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|383861208|ref|XP_003706078.1| PREDICTED: alpha-methylacyl-CoA racemase-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|340711797|ref|XP_003394455.1| PREDICTED: alpha-methylacyl-CoA racemase-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350402425|ref|XP_003486479.1| PREDICTED: alpha-methylacyl-CoA racemase-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|307191560|gb|EFN75058.1| Alpha-methylacyl-CoA racemase [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|119913313|ref|XP_593629.3| PREDICTED: alpha-methylacyl-CoA racemase [Bos taurus] gi|297487754|ref|XP_002696431.1| PREDICTED: alpha-methylacyl-CoA racemase [Bos taurus] gi|296475743|tpg|DAA17858.1| TPA: alpha-methylacyl-CoA racemase [Bos taurus] Back     alignment and taxonomy information
>gi|91083301|ref|XP_974629.1| PREDICTED: similar to alpha methylacyl-coa racemase [Tribolium castaneum] gi|270007738|gb|EFA04186.1| hypothetical protein TcasGA2_TC014435 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|56118274|ref|NP_001007886.1| alpha-methylacyl-CoA racemase [Xenopus (Silurana) tropicalis] gi|51259079|gb|AAH80155.1| amacr protein [Xenopus (Silurana) tropicalis] Back     alignment and taxonomy information
>gi|403290317|ref|XP_003936267.1| PREDICTED: alpha-methylacyl-CoA racemase isoform 1 [Saimiri boliviensis boliviensis] Back     alignment and taxonomy information
>gi|403290319|ref|XP_003936268.1| PREDICTED: alpha-methylacyl-CoA racemase isoform 2 [Saimiri boliviensis boliviensis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query381
UNIPROTKB|F1MCN8382 AMACR "Uncharacterized protein 0.971 0.968 0.539 4e-106
ZFIN|ZDB-GENE-050522-484382 c1qtnf3 "C1q and tumor necrosi 0.971 0.968 0.534 1.4e-103
UNIPROTKB|F1SP14388 AMACR "Uncharacterized protein 0.984 0.966 0.528 2.3e-103
UNIPROTKB|G3V8F9382 Amacr "Alpha-methylacyl-CoA ra 0.971 0.968 0.537 6e-103
RGD|3048382 Amacr "alpha-methylacyl-CoA ra 0.971 0.968 0.537 9.8e-103
MGI|MGI:1098273381 Amacr "alpha-methylacyl-CoA ra 0.968 0.968 0.523 1.3e-102
UNIPROTKB|Q9UHK6382 AMACR "Alpha-methylacyl-CoA ra 0.971 0.968 0.523 2e-102
UNIPROTKB|E2QYD9382 AMACR "Uncharacterized protein 0.971 0.968 0.515 2.7e-100
UNIPROTKB|D6RB81367 AMACR "Alpha-methylacyl-CoA ra 0.931 0.967 0.5 3.4e-93
UNIPROTKB|F1NKY1385 AMACR "Uncharacterized protein 0.968 0.958 0.484 1.7e-89
UNIPROTKB|F1MCN8 AMACR "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
 Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
 Identities = 203/376 (53%), Positives = 264/376 (70%)

Query:     1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
             MAL+GITV+E AGLAP PFCGM+L +FGA V+R+D+ GA+      +  GK+SL ++LK+
Sbjct:     1 MALRGITVVELAGLAPVPFCGMVLADFGAQVVRVDRPGARSG-PSRLARGKRSLVVDLKQ 59

Query:    61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
              +G +V++ L  ++DV+LEPFR GVMEKLQLGP++L K NPRLIYARLSG+GQ G +S M
Sbjct:    60 PRGAAVLRRLCARADVMLEPFRPGVMEKLQLGPEILQKENPRLIYARLSGFGQSGRFSKM 119

Query:   121 AGHDINYXXXXXXXXXXXWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
             AGHDINY               NP  P NL ADFGGGGLMCA+GI+MALFER++SG+GQV
Sbjct:   120 AGHDINYLALSGVLSRIGRSGENPYAPLNLLADFGGGGLMCAMGIIMALFERTRSGKGQV 179

Query:   181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
             ID +MVEG+AYL S++ +TQ+T LW++PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct:   180 IDASMVEGTAYLSSFMWKTQETGLWEQPRGQNMLDGGAPFYTTYRTADGGFMAVGAIEPQ 239

Query:   241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
             FY  L+ GLG+  +ELP      +    + K  + F +KT+AEWC+IFD TDACVTPVL+
Sbjct:   240 FYELLIKGLGLKSDELPNQLSMKDWPEMKKKFADIFAKKTKAEWCQIFDGTDACVTPVLT 299

Query:   297 LSQATSHPHNVHRGSFIPNRAGVVXXXXXXRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
               + T H HN  RGSFI +    V       LS TP    I + +P  G HT E+L+ FG
Sbjct:   300 FEEVTHHGHNKDRGSFITDTEQRVSPRPAPLLSNTPALPSI-KRDPFVGEHTEEILKEFG 358

Query:   357 YSDANIEELIREDVIE 372
             +S   I +L  +++IE
Sbjct:   359 FSQKEINQLKLDNIIE 374
GO:0005739 "mitochondrion" evidence=IEA
GO:0003824 "catalytic activity" evidence=IEA
ZFIN|ZDB-GENE-050522-484 c1qtnf3 "C1q and tumor necrosis factor related protein 3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1SP14 AMACR "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|G3V8F9 Amacr "Alpha-methylacyl-CoA racemase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
RGD|3048 Amacr "alpha-methylacyl-CoA racemase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1098273 Amacr "alpha-methylacyl-CoA racemase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q9UHK6 AMACR "Alpha-methylacyl-CoA racemase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2QYD9 AMACR "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|D6RB81 AMACR "Alpha-methylacyl-CoA racemase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NKY1 AMACR "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B5YYD2CAIB_ECO5E2, ., 8, ., 3, ., -0.25370.92120.8666yesN/A
Q9UHK6AMACR_HUMAN5, ., 1, ., 9, 9, ., 40.54780.97110.9685yesN/A
B5RGA5CAIB_SALG22, ., 8, ., 3, ., -0.25620.92120.8666yesN/A
B4EY24CAIB_PROMH2, ., 8, ., 3, ., -0.25370.91070.8546yesN/A
P70473AMACR_RAT5, ., 1, ., 9, 9, ., 40.56380.97110.9685yesN/A
O09174AMACR_MOUSE5, ., 1, ., 9, 9, ., 40.55310.96850.9685yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query381
COG1804396 COG1804, CaiB, Predicted acyl-CoA transferases/car 1e-109
pfam02515179 pfam02515, CoA_transf_3, CoA-transferase family II 1e-55
PRK11430381 PRK11430, PRK11430, putative CoA-transferase; Prov 2e-31
TIGR03253415 TIGR03253, oxalate_frc, formyl-CoA transferase 1e-30
PRK05398416 PRK05398, PRK05398, formyl-coenzyme A transferase; 4e-28
PRK03525405 PRK03525, PRK03525, crotonobetainyl-CoA:carnitine 8e-23
TIGR04253403 TIGR04253, mesacon_CoA_iso, mesaconyl-CoA isomeras 6e-07
>gnl|CDD|224717 COG1804, CaiB, Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion] Back     alignment and domain information 
 Score =  323 bits (831), Expect = e-109
 Identities = 126/395 (31%), Positives = 183/395 (46%), Gaps = 32/395 (8%)

Query: 3   LKGITVLEFAGLAPAPFCGMILNEFGATVIRID--KHG----AQPFVQDTVGY------G 50
           L+G+ V++ A +   PF G +L + GA VI+++    G        V D   Y      G
Sbjct: 8   LEGLRVIDLAHVLAGPFAGQLLADLGAEVIKVERPGGGDDTRVFAPVADGSAYFLALNRG 67

Query: 51  KKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSG 110
           K+S+ ++LK  +G  ++  L   +DV++E FR GV+E+L LG + L   NPRLIY  +SG
Sbjct: 68  KRSVALDLKTEEGREILLRLVAGADVLIENFRPGVLERLGLGYEALRAINPRLIYCSISG 127

Query: 111 YGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALF 170
           +GQ GPY+   G+D+     +G++S+ G  +  P P     AD   GGL  A+GI+ AL 
Sbjct: 128 FGQTGPYADRPGYDLIAQAEAGLMSITGRPDGPPVPAGVAIADL-AGGLYAAIGILAALL 186

Query: 171 ERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGR 230
            R ++GRGQ ID  M++ +  L +    T        P            YD Y T DG+
Sbjct: 187 HRERTGRGQHIDVAMLDAAVSLLANQLMTYLATG-KLPLRPGGAHPAIAPYDVYRTADGK 245

Query: 231 FMAVGALESQFYAQLLAGLGMTEEELP-----------QHEVETGRAKLTEKFKEKTQAE 279
            +A+GA   +F+  L   LG    EL                +   A L   F   T AE
Sbjct: 246 LVALGAGNDKFWQALCELLGR--PELADDPRFATNHARVANRDELDAILAAAFATNTAAE 303

Query: 280 WCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFI--PNRAG-VVAPAPAPRLSRTPGTSK 336
           W    +       PVL++++A + P    RG  +      G V  PAP PR S  P    
Sbjct: 304 WAARLEAAGVPAAPVLTVAEALADPQLQARGLVVEVEGPGGTVPQPAPPPRFSGAPA--G 361

Query: 337 ITEHNPAPGVHTREVLRHFGYSDANIEELIREDVI 371
           +    PA G HT  +L   GYS+  I  L     I
Sbjct: 362 VMRPPPALGEHTEAILAELGYSEREIAALKATGAI 396

Length = 396
>gnl|CDD|217078 pfam02515, CoA_transf_3, CoA-transferase family III Back     alignment and domain information
>gnl|CDD|183132 PRK11430, PRK11430, putative CoA-transferase; Provisional Back     alignment and domain information
>gnl|CDD|211800 TIGR03253, oxalate_frc, formyl-CoA transferase Back     alignment and domain information
>gnl|CDD|180055 PRK05398, PRK05398, formyl-coenzyme A transferase; Provisional Back     alignment and domain information
>gnl|CDD|179589 PRK03525, PRK03525, crotonobetainyl-CoA:carnitine CoA-transferase; Provisional Back     alignment and domain information
>gnl|CDD|211976 TIGR04253, mesacon_CoA_iso, mesaconyl-CoA isomerase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 381
COG1804396 CaiB Predicted acyl-CoA transferases/carnitine deh 100.0
PRK03525405 crotonobetainyl-CoA:carnitine CoA-transferase; Pro 100.0
PRK05398416 formyl-coenzyme A transferase; Provisional 100.0
TIGR03253415 oxalate_frc formyl-CoA transferase. This enzyme, f 100.0
PRK11430381 putative CoA-transferase; Provisional 100.0
KOG3957|consensus387 100.0
PF02515191 CoA_transf_3: CoA-transferase family III; InterPro 100.0
PF00670162 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase 94.94
PF02826178 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy 92.83
PF01262168 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal 92.62
TIGR00518370 alaDH alanine dehydrogenase. The family of known L 91.36
PRK06932314 glycerate dehydrogenase; Provisional 89.19
PRK04148134 hypothetical protein; Provisional 88.54
PRK06487317 glycerate dehydrogenase; Provisional 88.45
PRK08306296 dipicolinate synthase subunit A; Reviewed 88.29
PLN02928347 oxidoreductase family protein 87.59
PRK15469312 ghrA bifunctional glyoxylate/hydroxypyruvate reduc 87.44
TIGR00561511 pntA NAD(P) transhydrogenase, alpha subunit. In so 86.71
cd05311226 NAD_bind_2_malic_enz NAD(P) binding domain of mali 86.58
PF04127185 DFP: DNA / pantothenate metabolism flavoprotein; I 85.32
COG2227243 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- 84.96
PRK08410311 2-hydroxyacid dehydrogenase; Provisional 84.95
TIGR02853287 spore_dpaA dipicolinic acid synthetase, A subunit. 84.02
COG2521287 Predicted archaeal methyltransferase [General func 83.87
PTZ00075476 Adenosylhomocysteinase; Provisional 82.96
PRK06732229 phosphopantothenate--cysteine ligase; Validated 82.78
PRK13243333 glyoxylate reductase; Reviewed 82.14
PLN02494477 adenosylhomocysteinase 82.13
TIGR00521390 coaBC_dfp phosphopantothenoylcysteine decarboxylas 81.47
cd01078194 NAD_bind_H4MPT_DH NADP binding domain of methylene 81.4
PRK05476425 S-adenosyl-L-homocysteine hydrolase; Provisional 81.33
PLN03139386 formate dehydrogenase; Provisional 81.25
PF01488135 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; 80.98
PRK12480330 D-lactate dehydrogenase; Provisional 80.79
PRK15409323 bifunctional glyoxylate/hydroxypyruvate reductase 80.65
PRK06436303 glycerate dehydrogenase; Provisional 80.64
PRK07574385 formate dehydrogenase; Provisional 80.42
>COG1804 CaiB Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=2e-100  Score=739.36  Aligned_cols=367  Identities=33%  Similarity=0.551  Sum_probs=335.7

Q ss_pred             CCCCCcEEEEeCCcccHHHHHHHHHhcCCcEEEEccCCCC------------CchhhhccCCcceEEeeCCCcchHHHHH
Q psy1367           1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ------------PFVQDTVGYGKKSLCINLKKAKGLSVMK   68 (381)
Q Consensus         1 ~pL~GvrVld~~~~~agp~~~~~LadlGA~VikvE~p~~~------------~~~~~~~nrgK~sv~ldl~~~~g~~~~~   68 (381)
                      .||+|+||||+++.++||+||++||||||||||||+|+++            +.+|.+.||||+||+||||++|||++++
T Consensus         6 ~pL~GirViel~~~~aGP~ag~~LaDlGAeVIKVE~P~~gD~~R~~~~~~~~s~~f~~~nR~K~Sv~lDlk~~egre~~~   85 (396)
T COG1804           6 GPLEGLRVIDLAHVLAGPFAGQLLADLGAEVIKVERPGGGDDTRVFAPVADGSAYFLALNRGKRSVALDLKTEEGREILL   85 (396)
T ss_pred             CCCCceeeeeecccccChHHHhHHHHcCCcEEEecCCCCCCchhccccccCcchHHHHhcCCceEEEeecCCHhHHHHHH
Confidence            4899999999999999999999999999999999999843            2489999999999999999999999999


Q ss_pred             HHHhcCCEEEeCCCccHHHHcCCCHHHHhhhCCCcEEEEEeeCCCCCCCCCCCchHHHHHHhhhcccccCCCCCCCCCCC
Q psy1367          69 NLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPC  148 (381)
Q Consensus        69 ~L~~~aDv~i~n~~pg~~~~lGl~~~~l~~~nP~lI~~~isgfG~~Gp~~~~~~~d~~~~A~sG~~~~~g~~~~~P~~~~  148 (381)
                      +|+++|||||||||||+|+|||||||+|+++||+||||||||||++|||+++||||.++||++|+++.+|.++++|.+++
T Consensus        86 ~Lv~~ADVlienfrpG~l~rlGl~ye~L~~~NP~LIy~sisGfGq~GP~~~~~gyD~~~qa~~Gl~~~tG~~~~~P~~~g  165 (396)
T COG1804          86 RLVAGADVLIENFRPGVLERLGLGYEALRAINPRLIYCSISGFGQTGPYADRPGYDLIAQAEAGLMSITGRPDGPPVPAG  165 (396)
T ss_pred             HHHhhCceehcccchhHHHHhCCCHHHHHhhCCCeEEEEEeeCCCCCCCCCCCCccHHHHHhhCceeeccCCCCCCcccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccchHHHHHHHHHHHHHHHHHHhhhcCCceEEEcChhhHHHHhhhhHhhhhcccCCCCCCCCCCCCCCCccCeeeecCC
Q psy1367         149 NLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD  228 (381)
Q Consensus       149 ~~~~d~~ag~~~aa~gilaAL~~R~rtG~Gq~VdvSl~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~t~D  228 (381)
                      ..++|+.+| ++++++||+||++|+|||+||+||+||+|++..+....+..+......+.+.++.+.. .++|++|+|+|
T Consensus       166 ~~i~D~~~G-l~~~~~iLaAL~~r~~tG~Gq~Id~am~d~~~~~~~~~~~~~~~~G~~p~~~g~~~~~-~~py~~y~~aD  243 (396)
T COG1804         166 VAIADLAGG-LYAAIGILAALLHRERTGRGQHIDVAMLDAAVSLLANQLMTYLATGKLPLRPGGAHPA-IAPYDVYRTAD  243 (396)
T ss_pred             cchhhHHHH-HHHHHHHHHHHHHhccCCCCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccCCCCCCC-CCCcCceECCC
Confidence            999999997 9999999999999999999999999999999988777666554433333343433333 34699999999


Q ss_pred             CCEEEEEecCHHHHHHHHHHcCCCCC-CCCcc--------cHHHHHHHHHHHHhhcCHHHHHHHhhcCCCeEeeccChhh
Q psy1367         229 GRFMAVGALESQFYAQLLAGLGMTEE-ELPQH--------EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQ  299 (381)
Q Consensus       229 G~~v~l~~~~~~~w~~l~~~lG~~~~-~~~~~--------~~~~l~~~l~~~~~~~t~~ew~~~l~~a~vp~~~V~~~~e  299 (381)
                      |+|+++++.++++|++||+++|+++. .+++|        |++++.++++++|+++|.+||.+.|++++|||+||++++|
T Consensus       244 G~~~~i~~~~d~~~~~lc~~lg~peL~~d~rfa~n~~R~~~r~~l~~~i~~~~~~~t~~e~~~~l~~~~vp~~~v~~~~e  323 (396)
T COG1804         244 GKLVALGAGNDKFWQALCELLGRPELADDPRFATNHARVANRDELDAILAAAFATNTAAEWAARLEAAGVPAAPVLTVAE  323 (396)
T ss_pred             CCEEEEEeCChHHHHHHHHhcCCcccccCccccccccchhhHHHHHHHHHHHHhhcCHHHHHHHHHhcCCCccccCCHHH
Confidence            98899999999999999999999974 35665        6899999999999999999999999999999999999999


Q ss_pred             hhcCccccccccEEEcCCc---ceeccCCccccCCCCCCCCCCCCCCCCcCHHHHHHhCCCCHHHHHHHHhCCee
Q psy1367         300 ATSHPHNVHRGSFIPNRAG---VVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVI  371 (381)
Q Consensus       300 ~~~~p~~~~rg~~~~~~~g---~~~~~~~~~~~~~p~~~~~~~~aP~lGeht~evL~elG~s~~~I~~L~~~gvi  371 (381)
                      ++.|||+++|+++++++++   ..++.+|++|+++|....  +++|.+||||++||+++|||+++|++|+++|+|
T Consensus       324 ~~~~p~~~ar~~~~~~~~~~~~v~~~~~p~r~s~~~~~~~--~~~P~lG~~t~~vl~elg~s~~~i~~L~~~g~i  396 (396)
T COG1804         324 ALADPQLQARGLVVEVEGPGGTVPQPAPPPRFSGAPAGVM--RPPPALGEHTEAILAELGYSEREIAALKATGAI  396 (396)
T ss_pred             HhhChhHHhhCcEEeccCCCcccccccCCccccCCCCCcC--CCCCCCCccHHHHHHHcCCCHHHHHHHHhcCCC
Confidence            9999999999999999872   456888899998887544  478999999999999999999999999999986

>PRK03525 crotonobetainyl-CoA:carnitine CoA-transferase; Provisional Back     alignment and domain information
>PRK05398 formyl-coenzyme A transferase; Provisional Back     alignment and domain information
>TIGR03253 oxalate_frc formyl-CoA transferase Back     alignment and domain information
>PRK11430 putative CoA-transferase; Provisional Back     alignment and domain information
>KOG3957|consensus Back     alignment and domain information
>PF02515 CoA_transf_3: CoA-transferase family III; InterPro: IPR003673 CoA-transferases are found in organisms from all kingdoms of life Back     alignment and domain information
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 Back     alignment and domain information
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related Back     alignment and domain information
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 Back     alignment and domain information
>TIGR00518 alaDH alanine dehydrogenase Back     alignment and domain information
>PRK06932 glycerate dehydrogenase; Provisional Back     alignment and domain information
>PRK04148 hypothetical protein; Provisional Back     alignment and domain information
>PRK06487 glycerate dehydrogenase; Provisional Back     alignment and domain information
>PRK08306 dipicolinate synthase subunit A; Reviewed Back     alignment and domain information
>PLN02928 oxidoreductase family protein Back     alignment and domain information
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional Back     alignment and domain information
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit Back     alignment and domain information
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 Back     alignment and domain information
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism Back     alignment and domain information
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] Back     alignment and domain information
>PRK08410 2-hydroxyacid dehydrogenase; Provisional Back     alignment and domain information
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit Back     alignment and domain information
>COG2521 Predicted archaeal methyltransferase [General function prediction only] Back     alignment and domain information
>PTZ00075 Adenosylhomocysteinase; Provisional Back     alignment and domain information
>PRK06732 phosphopantothenate--cysteine ligase; Validated Back     alignment and domain information
>PRK13243 glyoxylate reductase; Reviewed Back     alignment and domain information
>PLN02494 adenosylhomocysteinase Back     alignment and domain information
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic Back     alignment and domain information
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase Back     alignment and domain information
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional Back     alignment and domain information
>PLN03139 formate dehydrogenase; Provisional Back     alignment and domain information
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases Back     alignment and domain information
>PRK12480 D-lactate dehydrogenase; Provisional Back     alignment and domain information
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional Back     alignment and domain information
>PRK06436 glycerate dehydrogenase; Provisional Back     alignment and domain information
>PRK07574 formate dehydrogenase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query381
1x74_A360 Alpha-Methylacyl-Coa Racemase From Mycobacterium Tu 3e-74
2g04_A359 Crystal Structure Of Fatty Acid-Coa Racemase From M 5e-72
3ubm_A456 Formyl-Coa:oxalate Coa-Transferase From Acetobacter 4e-19
4ed9_A385 Crystal Structure Of A CaibBAIF FAMILY PROTEIN FROM 4e-18
1q6y_A428 Hypothetical Protein Yfdw From E. Coli Bound To Coe 8e-15
1pt5_A437 Crystal Structure Of Gene Yfdw Of E. Coli Length = 1e-14
2vjn_A428 Formyl-coa Transferase Mutant Variant G260a Length 5e-14
2vjo_A428 Formyl-Coa Transferase Mutant Variant Q17a With Asp 2e-13
2vjp_A428 Formyl-Coa Transferase Mutant Variant W48f Length = 2e-13
1p5h_A428 Crystal Structure Of Formyl-Coa Transferase (Apoenz 6e-13
1vgq_A427 Formyl-Coa Transferase Mutant Asp169 To Ala Length 7e-13
2vjm_B428 Formyl-Coa Transferase With Aspartyl-Formyl Anhydid 8e-13
1t3z_A427 Formyl-Coa Tranferase Mutant Asp169 To Ser Length = 8e-13
1t4c_A427 Formyl-Coa Transferase In Complex With Oxalyl-Coa L 8e-13
2vjk_A428 Formyl-Coa Transferase With Aspartyl-Coa Thioester 8e-13
1t4c_B427 Formyl-Coa Transferase In Complex With Oxalyl-Coa L 8e-13
1vgr_A427 Formyl-Coa Transferase Mutant Asp169 To Glu Length 9e-13
2vjq_A428 Formyl-Coa Transferase Mutant Variant W48q Length = 1e-12
1q7e_A428 Crystal Structure Of Yfdw Protein From E. Coli Leng 4e-12
1pqy_A428 Crystal Structure Of Formyl-Coa Transferase Yfdw Fr 1e-11
1xvu_A408 Crystal Structure Of Caib Mutant D169a In Complex W 3e-11
1xk6_A408 Crystal Structure- P1 Form- Of Escherichia Coli Cro 6e-11
1xa3_A437 Crystal Structure Of Caib, A Type Iii Coa Transfera 6e-11
1xk7_A408 Crystal Structure- C2 Form- Of Escherichia Coli Cro 7e-11
>pdb|1X74|A Chain A, Alpha-Methylacyl-Coa Racemase From Mycobacterium Tuberculosis- Mutational And Structural Characterization Of The Fold And Active Site Length = 360 Back     alignment and structure 
Iteration: 1

 Score =  275 bits (704), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 138/315 (43%), Positives = 191/315 (60%), Gaps = 5/315 (1%)
Query: 3   LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV-QDTVGYGKKSLCINLKKA 61
           L G+ V+E AG+ P P   MIL + GA V+RID+  +   + +D +   ++ +  +LK  
Sbjct: 5   LSGLRVVELAGIGPGPHAAMILGDLGADVVRIDRPSSVDGISRDAMLRNRRIVTADLKSD 64
Query: 62  KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
           +GL +   L  ++DV++E +R GV E+L LGP+   K N RLIYAR++G+GQ GP S  A
Sbjct: 65  QGLELALKLIAKADVLIEGYRPGVTERLGLGPEECAKVNDRLIYARMTGWGQTGPRSQQA 124
Query: 122 GHDINYXXXXXXXXXXXWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
           GHDINY             +  P PP NL  DFGGG +   +GI+ AL+ER  SG+GQV+
Sbjct: 125 GHDINYISLNGILHAIGRGDERPVPPLNLVGDFGGGSMFLLVGILAALWERQSSGKGQVV 184
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
           D  MV+GS+ L   +   + T +W   RG N+LDGGA +YDTYE  DGR++AVGA+E QF
Sbjct: 185 DAAMVDGSSVLIQMMWAMRATGMWTDTRGANMLDGGAPYYDTYECADGRYVAVGAIEPQF 244
Query: 242 YAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
           YA +LAGLG+   ELP           RA LTE F    +  W  +F N+DACVTPVL+ 
Sbjct: 245 YAAMLAGLGLDAAELPPQNDRARWPELRALLTEAFASHDRDHWGAVFANSDACVTPVLAF 304
Query: 298 SQATSHPHNVHRGSF 312
            +  + PH + R +F
Sbjct: 305 GEVHNEPHIIERNTF 319
>pdb|2G04|A Chain A, Crystal Structure Of Fatty Acid-Coa Racemase From Mycobacterium Tuberculosis H37rv Length = 359 Back     alignment and structure
>pdb|3UBM|A Chain A, Formyl-Coa:oxalate Coa-Transferase From Acetobacter Aceti Length = 456 Back     alignment and structure
>pdb|4ED9|A Chain A, Crystal Structure Of A CaibBAIF FAMILY PROTEIN FROM BRUCELLA SUIS Length = 385 Back     alignment and structure
>pdb|1Q6Y|A Chain A, Hypothetical Protein Yfdw From E. Coli Bound To Coenzyme A Length = 428 Back     alignment and structure
>pdb|1PT5|A Chain A, Crystal Structure Of Gene Yfdw Of E. Coli Length = 437 Back     alignment and structure
>pdb|2VJN|A Chain A, Formyl-coa Transferase Mutant Variant G260a Length = 428 Back     alignment and structure
>pdb|2VJO|A Chain A, Formyl-Coa Transferase Mutant Variant Q17a With Aspartyl- Coa Thioester Intermediates And Oxalate Length = 428 Back     alignment and structure
>pdb|2VJP|A Chain A, Formyl-Coa Transferase Mutant Variant W48f Length = 428 Back     alignment and structure
>pdb|1P5H|A Chain A, Crystal Structure Of Formyl-Coa Transferase (Apoenzyme) From Oxalobacter Formigenes Length = 428 Back     alignment and structure
>pdb|1VGQ|A Chain A, Formyl-Coa Transferase Mutant Asp169 To Ala Length = 427 Back     alignment and structure
>pdb|2VJM|B Chain B, Formyl-Coa Transferase With Aspartyl-Formyl Anhydide Intermediate Length = 428 Back     alignment and structure
>pdb|1T3Z|A Chain A, Formyl-Coa Tranferase Mutant Asp169 To Ser Length = 427 Back     alignment and structure
>pdb|1T4C|A Chain A, Formyl-Coa Transferase In Complex With Oxalyl-Coa Length = 427 Back     alignment and structure
>pdb|2VJK|A Chain A, Formyl-Coa Transferase With Aspartyl-Coa Thioester Intermediate Derived From Oxalyl-Coa Length = 428 Back     alignment and structure
>pdb|1T4C|B Chain B, Formyl-Coa Transferase In Complex With Oxalyl-Coa Length = 427 Back     alignment and structure
>pdb|1VGR|A Chain A, Formyl-Coa Transferase Mutant Asp169 To Glu Length = 427 Back     alignment and structure
>pdb|2VJQ|A Chain A, Formyl-Coa Transferase Mutant Variant W48q Length = 428 Back     alignment and structure
>pdb|1Q7E|A Chain A, Crystal Structure Of Yfdw Protein From E. Coli Length = 428 Back     alignment and structure
>pdb|1PQY|A Chain A, Crystal Structure Of Formyl-Coa Transferase Yfdw From E. Coli Length = 428 Back     alignment and structure
>pdb|1XVU|A Chain A, Crystal Structure Of Caib Mutant D169a In Complex With Coenzyme A Length = 408 Back     alignment and structure
>pdb|1XK6|A Chain A, Crystal Structure- P1 Form- Of Escherichia Coli Crotonobetainyl-Coa: Carnitine Coa Transferase (Caib) Length = 408 Back     alignment and structure
>pdb|1XA3|A Chain A, Crystal Structure Of Caib, A Type Iii Coa Transferase In Carnitine Metabolism Length = 437 Back     alignment and structure
>pdb|1XK7|A Chain A, Crystal Structure- C2 Form- Of Escherichia Coli Crotonobetainyl-coa: Carnitine Coa Transferase (caib) Length = 408 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query381
2yim_A360 Probable alpha-methylacyl-COA racemase MCR (2-meth 0.0
2g04_A359 Probable fatty-acid-COA racemase FAR; isomerase; 2 0.0
1q7e_A428 Hypothetical protein YFDW; structural genomics, in 1e-91
1xk7_A408 Crotonobetainyl-COA:carnitine COA-transferase; CAI 1e-89
2vjq_A428 Formyl-coenzyme A transferase; class III COA trans 2e-86
3ubm_A456 COAT2, formyl-COA:oxalate COA-transferase; HET: CO 2e-86
4ed9_A385 CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI 9e-77
>2yim_A Probable alpha-methylacyl-COA racemase MCR (2-methylacyl-COA racemase) (2-arylpropionyl-COA...; isomerase, methyl-COA racemase; HET: MC4; 1.41A {Mycobacterium tuberculosis} PDB: 2gce_A* 1x74_A* 2gd0_A* 2gd2_A* 2gd6_A* 2gci_A* Length = 360 Back     alignment and structure
 Score =  520 bits (1341), Expect = 0.0
 Identities = 158/360 (43%), Positives = 216/360 (60%), Gaps = 11/360 (3%)

Query: 1   MA--LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV-QDTVGYGKKSLCIN 57
           MA  L G+ V+E AG+ P P   MIL + GA V+RID+  +   + +D +   ++ +  +
Sbjct: 1   MAGPLSGLRVVELAGIGPGPHAAMILGDLGADVVRIDRPSSVDGISRDAMLRNRRIVTAD 60

Query: 58  LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
           LK  +GL +   L  ++DV++E +R GV E+L LGP+   K N RLIYAR++G+GQ GP 
Sbjct: 61  LKSDQGLELALKLIAKADVLIEGYRPGVTERLGLGPEECAKVNDRLIYARMTGWGQTGPR 120

Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
           S  AGHDINY+ L+GIL  +G  +  P PP NL  DFGGG +   +GI+ AL+ER  SG+
Sbjct: 121 SQQAGHDINYISLNGILHAIGRGDERPVPPLNLVGDFGGGSMFLLVGILAALWERQSSGK 180

Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
           GQV+D  MV+GS+ L   +   + T +W   RG N+LDGGA +YDTYE  DGR++AVGA+
Sbjct: 181 GQVVDAAMVDGSSVLIQMMWAMRATGMWTDTRGANMLDGGAPYYDTYECADGRYVAVGAI 240

Query: 238 ESQFYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
           E QFYA +LAGLG+   ELP           RA LTE F    +  W  +F N+DACVTP
Sbjct: 241 EPQFYAAMLAGLGLDAAELPPQNDRARWPELRALLTEAFASHDRDHWGAVFANSDACVTP 300

Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
           VL+  +  + PH + R +F     G   P PAPR SRT  +       PA  +    VL 
Sbjct: 301 VLAFGEVHNEPHIIERNTFY-EANGGWQPMPAPRFSRTASS---QPRPPAATIDIEAVLT 356
>2g04_A Probable fatty-acid-COA racemase FAR; isomerase; 2.70A {Mycobacterium tuberculosis} Length = 359 Back     alignment and structure
>1q7e_A Hypothetical protein YFDW; structural genomics, intertwined dimer, PSI, protein structu initiative; HET: MSE; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1pqy_A* 1q6y_A* 1pt7_A 1pt5_A 1pt8_A* Length = 428 Back     alignment and structure
>1xk7_A Crotonobetainyl-COA:carnitine COA-transferase; CAIB, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1xk6_A 1xvt_A* 1xvu_A* 1xvv_A* 1xa3_A* 1xa4_A* Length = 408 Back     alignment and structure
>2vjq_A Formyl-coenzyme A transferase; class III COA transferase; HET: EPE; 1.8A {Oxalobacter formigenes} PDB: 2vjp_A 2vjm_A* 2vjl_A* 2vjk_A* 1p5h_A 1p5r_A* 2vjn_A* 1t4c_A* 2vjo_A* 2vjm_B* 1vgr_A* 1t3z_A* 1t4c_B* 1vgq_A* Length = 428 Back     alignment and structure
>3ubm_A COAT2, formyl-COA:oxalate COA-transferase; HET: COA; 1.99A {Acetobacter aceti} Length = 456 Back     alignment and structure
>4ed9_A CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: NHE; 1.95A {Brucella suis} Length = 385 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query381
3ubm_A456 COAT2, formyl-COA:oxalate COA-transferase; HET: CO 100.0
1q7e_A428 Hypothetical protein YFDW; structural genomics, in 100.0
1xk7_A408 Crotonobetainyl-COA:carnitine COA-transferase; CAI 100.0
2yim_A360 Probable alpha-methylacyl-COA racemase MCR (2-meth 100.0
2vjq_A428 Formyl-coenzyme A transferase; class III COA trans 100.0
4ed9_A385 CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI 100.0
2g04_A359 Probable fatty-acid-COA racemase FAR; isomerase; 2 100.0
4dio_A405 NAD(P) transhydrogenase subunit alpha PART 1; stru 94.64
3p2y_A381 Alanine dehydrogenase/pyridine nucleotide transhy; 93.61
1vl6_A388 Malate oxidoreductase; TM0542, NAD-dependent malic 92.9
1x13_A401 NAD(P) transhydrogenase subunit alpha; NAD(H)-bind 92.48
1l7d_A384 Nicotinamide nucleotide transhydrogenase, subunit 91.32
2a9f_A398 Putative malic enzyme ((S)-malate:NAD+ oxidoreduct 91.23
3h9u_A436 Adenosylhomocysteinase; NAD CO-factor complex, str 90.82
4b79_A242 PA4098, probable short-chain dehydrogenase; oxidor 90.65
2eez_A369 Alanine dehydrogenase; TTHA0216, structural genomi 89.69
3pp8_A315 Glyoxylate/hydroxypyruvate reductase A; structural 89.6
2hmt_A144 YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane 89.34
3n58_A464 Adenosylhomocysteinase; ssgcid, hydrolase, structu 88.68
3gvx_A290 Glycerate dehydrogenase related protein; NYSGXRC, 88.51
3r6d_A221 NAD-dependent epimerase/dehydratase; structural ge 87.48
3evt_A324 Phosphoglycerate dehydrogenase; structural genomic 87.36
2gk4_A232 Conserved hypothetical protein; alpha-beta-alpha s 87.19
1a4i_A301 Methylenetetrahydrofolate dehydrogenase / methenyl 86.95
3tpc_A257 Short chain alcohol dehydrogenase-related dehydro; 86.85
3gvp_A435 Adenosylhomocysteinase 3; protein CO-factor comple 86.59
2i6u_A307 Otcase, ornithine carbamoyltransferase; X-RAY crys 86.53
3dou_A191 Ribosomal RNA large subunit methyltransferase J; c 85.86
3hg7_A324 D-isomer specific 2-hydroxyacid dehydrogenase FAM 85.77
3ba1_A333 HPPR, hydroxyphenylpyruvate reductase; two domain 85.76
2cuk_A311 Glycerate dehydrogenase/glyoxylate reductase; stru 85.62
2vhw_A377 Alanine dehydrogenase; NAD, secreted, oxidoreducta 85.43
1pvv_A315 Otcase, ornithine carbamoyltransferase; dodecamer; 85.1
3k31_A296 Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI 85.05
3rft_A267 Uronate dehydrogenase; apoenzyme, rossmann fold, N 84.7
2yq5_A343 D-isomer specific 2-hydroxyacid dehydrogenase; oxi 84.7
2o23_A265 HADH2 protein; HSD17B10, schad, ERAB, type II HADH 84.4
2dvm_A439 Malic enzyme, 439AA long hypothetical malate oxido 84.31
4dgs_A340 Dehydrogenase; structural genomics, PSI-biology, N 84.23
3ic5_A118 Putative saccharopine dehydrogenase; structural ge 84.06
2g1u_A155 Hypothetical protein TM1088A; structural genomics, 84.06
1vlv_A325 Otcase, ornithine carbamoyltransferase; TM1097, st 83.99
3tl3_A257 Short-chain type dehydrogenase/reductase; ssgcid, 83.98
3tzq_B271 Short-chain type dehydrogenase/reductase; ssgcid, 83.96
4fs3_A256 Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; 83.76
3op4_A248 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto 83.62
3d3w_A244 L-xylulose reductase; uronate cycle, short-chain d 83.57
3oig_A266 Enoyl-[acyl-carrier-protein] reductase [NADH]; fat 83.37
4g2n_A345 D-isomer specific 2-hydroxyacid dehydrogenase, Na; 82.61
3d4o_A293 Dipicolinate synthase subunit A; NP_243269.1, stru 82.48
2pzm_A330 Putative nucleotide sugar epimerase/ dehydratase; 82.37
3d64_A494 Adenosylhomocysteinase; structural genomics, ssgci 82.19
4h15_A261 Short chain alcohol dehydrogenase-related dehydro; 82.07
4f2g_A309 Otcase 1, ornithine carbamoyltransferase 1; struct 82.01
1lu9_A287 Methylene tetrahydromethanopterin dehydrogenase; a 81.99
1cyd_A244 Carbonyl reductase; short-chain dehydrogenase, oxi 81.93
3r1i_A276 Short-chain type dehydrogenase/reductase; structur 81.81
2pi1_A334 D-lactate dehydrogenase; oxidoreductase, D-LDH, NA 81.8
1u7z_A226 Coenzyme A biosynthesis bifunctional protein coabc 81.68
2w37_A359 Ornithine carbamoyltransferase, catabolic; transca 81.63
3uf0_A273 Short-chain dehydrogenase/reductase SDR; gluconate 81.52
2gcg_A330 Glyoxylate reductase/hydroxypyruvate reductase; NA 81.45
2ag5_A246 DHRS6, dehydrogenase/reductase (SDR family) member 81.34
2h7i_A269 Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi 81.31
3gem_A260 Short chain dehydrogenase; structural genomics, AP 81.2
1wwk_A307 Phosphoglycerate dehydrogenase; riken structural g 80.92
3jtm_A351 Formate dehydrogenase, mitochondrial; mitochondrio 80.91
4dmm_A269 3-oxoacyl-[acyl-carrier-protein] reductase; rossma 80.8
3rd5_A291 Mypaa.01249.C; ssgcid, structural genomics, seattl 80.61
1duv_G333 Octase-1, ornithine transcarbamoylase; enzyme-inhi 80.57
3vtz_A269 Glucose 1-dehydrogenase; rossmann fold, oxidoreduc 80.36
1v8b_A479 Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 80.23
>3ubm_A COAT2, formyl-COA:oxalate COA-transferase; HET: COA; 1.99A {Acetobacter aceti} Back     alignment and structure
Probab=100.00  E-value=1e-102  Score=776.87  Aligned_cols=366  Identities=26%  Similarity=0.386  Sum_probs=330.0

Q ss_pred             CCCCCcEEEEeCCcccHHHHHHHHHhcCCcEEEEccCC-CC-------------CchhhhccCCcceEEeeCCCcchHHH
Q psy1367           1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-AQ-------------PFVQDTVGYGKKSLCINLKKAKGLSV   66 (381)
Q Consensus         1 ~pL~GvrVld~~~~~agp~~~~~LadlGA~VikvE~p~-~~-------------~~~~~~~nrgK~sv~ldl~~~~g~~~   66 (381)
                      .||+||||||||+++|||||+++||||||||||||+|+ ++             +.+|..+|||||||+||||+|+||++
T Consensus        29 ~PL~GirVlDls~~~aGP~a~~lLADlGAdVIKVE~p~~GD~~R~~~~~~~~~~s~~f~~~NRnKrSi~LDLk~~eGr~~  108 (456)
T 3ubm_A           29 KPLDGIKVIDFGGVQSVPSAAQLLAWYGADVIKIERVGVGDITRNQLRDIPDADALYFTMLNCNKRSVELNTKTPEGKAV  108 (456)
T ss_dssp             CTTTTCEEEEECCSSHHHHHHHHHHHTTCEEEEEECTTTCSGGGSSSCSSTTSCCHHHHTTCTTCEEEECCTTSHHHHHH
T ss_pred             CCCCCCEEEEcCCccHHHHHHHHHHHhCCeEEEECCCCCCCcccccCCCCCCCccHHHHHhCCCCcEEEeeCCCHHHHHH
Confidence            48999999999999999999999999999999999995 32             24789999999999999999999999


Q ss_pred             HHHHHhcCCEEEeCCCccHHHHcCCCHHHHhhhCCCcEEEEEeeCCCCCCCCCCCchHHHHHHhhhcccccCCCCC----
Q psy1367          67 MKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNR----  142 (381)
Q Consensus        67 ~~~L~~~aDv~i~n~~pg~~~~lGl~~~~l~~~nP~lI~~~isgfG~~Gp~~~~~~~d~~~~A~sG~~~~~g~~~~----  142 (381)
                      |++|+++|||||||||||+|+|||||||+|+++||+||||+|||||++|||+++||||+++||+||+++++|.+++    
T Consensus       109 l~~Li~~ADVvvenfRPG~~erlGL~ye~L~~~NP~LIy~sisGfG~~GP~a~rpg~D~~~qA~sG~~~~~G~~~~~~~~  188 (456)
T 3ubm_A          109 FEKCIKWADILLENFRPGAMERMGFTWEYLQQLNPRLIYGTVKGFGENSPWAGVSAYENVAQCAGGATSTTGYWNGAPLV  188 (456)
T ss_dssp             HHHHHHHCSEEEECCSTTHHHHTTCCHHHHHHHCTTCEEEEEESSCTTCTTTTSCCCHHHHHHHTTHHHHSSCCSSSSCC
T ss_pred             HHHHHHhCCEEEECCCccHHHHhCCCHHHHHHhCCCcEEEEEEecCCCCCCCCCCCcHHHHHHHhChhhhcCCCCCcccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999887    


Q ss_pred             ------C---CCCCCCccchHHHHHHHHHHHHHHHHHHhhhcCCceEEEcChhhHHHHhhhhHhhhhccc----------
Q psy1367         143 ------N---PTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTF----------  203 (381)
Q Consensus       143 ------~---P~~~~~~~~d~~ag~~~aa~gilaAL~~R~rtG~Gq~VdvSl~ea~~~~~~~~~~~~~~~----------  203 (381)
                            +   |.+++..++|+.+| +++++|||+||++|+|||+||+|||||+|++++++...+..+...          
T Consensus       189 ~~~~~~~~~~P~~~~~~~~D~~~G-~~aa~giLaAL~~R~rTG~Gq~VdvSl~d~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (456)
T 3ubm_A          189 DGQAPGNNNGPLVSAAALGDSNTG-NHLLIGVLAALFGRERTGKGQKISVSMQDAVLNLCRVKLRDQQRLERVGYLEEYP  267 (456)
T ss_dssp             TTCCSTTCCCCCCCSSCTTTHHHH-HHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHTHHHHHHHHHHHHHSCCTTST
T ss_pred             ccccccccCCCccCCchhhHHHHH-HHHHHHHHHHHHHHHhcCCceEEEeeHHHHHHHHHHHHHHHHHhhcccccccccc
Confidence                  7   99888999999997 999999999999999999999999999999987665433222111          


Q ss_pred             -------CCCCCCCCCCCCCCCccCeeeec----CCCCEEEEEecCHHHHHHHHHHcCCCCC-CCCcc--------cHHH
Q psy1367         204 -------LWDKPRGENLLDGGAHFYDTYET----KDGRFMAVGALESQFYAQLLAGLGMTEE-ELPQH--------EVET  263 (381)
Q Consensus       204 -------~~~~~~~~~~~~~~~~~~~~y~t----~DG~~v~l~~~~~~~w~~l~~~lG~~~~-~~~~~--------~~~~  263 (381)
                             ...+.|.++..+... +|++|+|    +||+||+|++.++++|++||++||++++ ++++|        |+++
T Consensus       268 ~~~~~~~g~~~~r~g~~~~~~~-py~~y~t~~~~~DG~~i~i~~~~~~~w~~l~~~lg~~dl~~dprf~t~~~R~~~~~~  346 (456)
T 3ubm_A          268 QYPNGKFGDTVPRGGNAGGGGQ-PGWILKCKGWETDDNAYIYCTVQEQDWGPTCEAIGKPEWATDPKYNTAKARETHMFE  346 (456)
T ss_dssp             TTTTSCCCSSCCCCTTCCCSSS-CEEEEECTTTTTCTTCEEEEECCSTTHHHHHHHTTCHHHHSCTTTSSHHHHGGGHHH
T ss_pred             ccccccCCCCCCCCCCCCCCCC-CCCccccCCCCCCCCEEEEEeCCHHHHHHHHHHhCchhhccCcccCChHHHHHhHHH
Confidence                   123445566555544 4999999    9998899999999999999999999873 46666        7889


Q ss_pred             HHHHHHHHHhhcCHHHHHHHhhcCCCeEeeccChhhhhcCccccccccEEEcCC---c-ceeccCCccccCCCCCCCCCC
Q psy1367         264 GRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRA---G-VVAPAPAPRLSRTPGTSKITE  339 (381)
Q Consensus       264 l~~~l~~~~~~~t~~ew~~~l~~a~vp~~~V~~~~e~~~~p~~~~rg~~~~~~~---g-~~~~~~~~~~~~~p~~~~~~~  339 (381)
                      +.++|++||+++|++||+++|++++|||+||++++|+++|||+++|++|+++++   | ..++ +|++|+ +|....  .
T Consensus       347 l~~~l~~~~~~~t~~ew~~~l~~~~vp~~pV~~~~e~~~dp~~~arg~~~~v~~p~~g~~~~~-~p~~~s-~~~~~~--~  422 (456)
T 3ubm_A          347 IFAAIEKAIADKTKYEAVAHLAKYRVPCSPVLSMKEIAEAPDLRESGTIVEVQQPKRGTFLTI-NPIKFS-GFTPEI--K  422 (456)
T ss_dssp             HHHHHHHHHTTSCHHHHHHHHHHTTCCEEECCCHHHHHHCHHHHHTTSEEEEEETTTEEEEEE-CCEEES-SCCCCC--C
T ss_pred             HHHHHHHHHhcCCHHHHHHHHHhcCCCeEEeCCHHHcccChHHHhcCeEEEEecCCCCeEEEe-cCeecC-CCCCCC--C
Confidence            999999999999999999999999999999999999999999999999999976   3 4567 888999 887543  4


Q ss_pred             CCCCCCcCHHHHHHhCCCCHHHHHHHHhCCeee
Q psy1367         340 HNPAPGVHTREVLRHFGYSDANIEELIREDVIE  372 (381)
Q Consensus       340 ~aP~lGeht~evL~elG~s~~~I~~L~~~gvi~  372 (381)
                      ++|.+||||++||+||||++++|++|+++|+|.
T Consensus       423 ~aP~lGeht~eVL~elG~s~~eI~~L~~~gv~~  455 (456)
T 3ubm_A          423 AAPLLGQHTDEVLAELGYSAEEIKSLRDKKITC  455 (456)
T ss_dssp             CCCCTTTTHHHHHHHTTCCHHHHHHHHHTTSSC
T ss_pred             CCCCCCcCHHHHHHHcCCCHHHHHHHHHCcCcc
Confidence            799999999999999999999999999999985
>1q7e_A Hypothetical protein YFDW; structural genomics, intertwined dimer, PSI, protein structu initiative; HET: MSE; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1pqy_A* 1q6y_A* 1pt7_A 1pt5_A 1pt8_A* Back     alignment and structure
>1xk7_A Crotonobetainyl-COA:carnitine COA-transferase; CAIB, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1xk6_A 1xvt_A* 1xvu_A* 1xvv_A* 1xa3_A* 1xa4_A* Back     alignment and structure
>2yim_A Probable alpha-methylacyl-COA racemase MCR (2-methylacyl-COA racemase) (2-arylpropionyl-COA...; isomerase, methyl-COA racemase; HET: MC4; 1.41A {Mycobacterium tuberculosis} PDB: 2gce_A* 1x74_A* 2gd0_A* 2gd2_A* 2gd6_A* 2gci_A* Back     alignment and structure
>2vjq_A Formyl-coenzyme A transferase; class III COA transferase; HET: EPE; 1.8A {Oxalobacter formigenes} PDB: 2vjp_A 2vjm_A* 2vjl_A* 2vjk_A* 1p5h_A 1p5r_A* 2vjn_A* 1t4c_A* 2vjo_A* 2vjm_B* 1vgr_A* 1t3z_A* 1t4c_B* 1vgq_A* Back     alignment and structure
>4ed9_A CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: NHE; 1.95A {Brucella suis} Back     alignment and structure
>2g04_A Probable fatty-acid-COA racemase FAR; isomerase; 2.70A {Mycobacterium tuberculosis} Back     alignment and structure
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} Back     alignment and structure
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} Back     alignment and structure
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* Back     alignment and structure
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* Back     alignment and structure
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* Back     alignment and structure
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} Back     alignment and structure
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* Back     alignment and structure
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} Back     alignment and structure
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} Back     alignment and structure
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A Back     alignment and structure
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* Back     alignment and structure
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} Back     alignment and structure
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} Back     alignment and structure
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* Back     alignment and structure
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} Back     alignment and structure
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} Back     alignment and structure
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* Back     alignment and structure
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Back     alignment and structure
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* Back     alignment and structure
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A Back     alignment and structure
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0 Back     alignment and structure
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} Back     alignment and structure
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A* Back     alignment and structure
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus} Back     alignment and structure
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* Back     alignment and structure
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A Back     alignment and structure
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Back     alignment and structure
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Back     alignment and structure
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A* Back     alignment and structure
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Back     alignment and structure
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A* Back     alignment and structure
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} Back     alignment and structure
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Back     alignment and structure
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* Back     alignment and structure
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1 Back     alignment and structure
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Back     alignment and structure
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 Back     alignment and structure
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A Back     alignment and structure
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Back     alignment and structure
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Back     alignment and structure
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Back     alignment and structure
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} Back     alignment and structure
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Back     alignment and structure
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Back     alignment and structure
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* Back     alignment and structure
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* Back     alignment and structure
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} Back     alignment and structure
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Back     alignment and structure
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Back     alignment and structure
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Back     alignment and structure
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* Back     alignment and structure
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii} Back     alignment and structure
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 Back     alignment and structure
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A Back     alignment and structure
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Back     alignment and structure
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Back     alignment and structure
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Back     alignment and structure
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} Back     alignment and structure
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A Back     alignment and structure
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Back     alignment and structure
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Back     alignment and structure
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A* Back     alignment and structure
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Back     alignment and structure
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 381
d1x74a1359 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr 1e-84
d1q7ea_417 c.123.1.1 (A:) Hypothetical protein YfdW {Escheric 4e-64
d2vjma1427 c.123.1.1 (A:2-428) Formyl-CoA transferase {Oxalob 2e-59
d1xk7a1402 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine 3e-50
>d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]} Length = 359 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: 2-methylacyl-CoA racemase Mcr
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  259 bits (662), Expect = 1e-84
 Identities = 156/359 (43%), Positives = 213/359 (59%), Gaps = 9/359 (2%)

Query: 2   ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-HGAQPFVQDTVGYGKKSLCINLKK 60
            L G+ V+E AG+ P P   MIL + GA V+RID+        +D +   ++ +  +LK 
Sbjct: 3   PLSGLRVVELAGIGPGPHAAMILGDLGADVVRIDRPSSVDGISRDAMLRNRRIVTADLKS 62

Query: 61  AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
            +GL +   L  ++DV++E +R GV E+L LGP+   K N RLIYAR++G+GQ GP S  
Sbjct: 63  DQGLELALKLIAKADVLIEGYRPGVTERLGLGPEECAKVNDRLIYARMTGWGQTGPRSQQ 122

Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
           AGHDINY+ L+GIL  +G  +  P PP NL  DFGGG +   +GI+ AL+ER  SG+GQV
Sbjct: 123 AGHDINYISLNGILHAIGRGDERPVPPLNLVGDFGGGSMFLLVGILAALWERQSSGKGQV 182

Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
           +D  MV+GS+ L   +   + T +W   RG N+LDGGA +YDTYE  DGR++AVGA+E Q
Sbjct: 183 VDAAMVDGSSVLIQMMWAMRATGMWTDTRGANMLDGGAPYYDTYECADGRYVAVGAIEPQ 242

Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
           FYA +LAGLG+   ELP           RA LTE F    +  W  +F N+DACVTPVL+
Sbjct: 243 FYAAMLAGLGLDAAELPPQNDRARWPELRALLTEAFASHDRDHWGAVFANSDACVTPVLA 302

Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
             +  + PH + R +F     G   P PAPR SRT  +       PA  +    VL  +
Sbjct: 303 FGEVHNEPHIIERNTFYEAN-GGWQPMPAPRFSRTASSQP---RPPAATIDIEAVLTDW 357
>d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]} Length = 417 Back     information, alignment and structure
>d2vjma1 c.123.1.1 (A:2-428) Formyl-CoA transferase {Oxalobacter formigenes [TaxId: 847]} Length = 427 Back     information, alignment and structure
>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]} Length = 402 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query381
d1xk7a1402 Crotonobetainyl-CoA:carnitine CoA-transferase, Cai 100.0
d1q7ea_417 Hypothetical protein YfdW {Escherichia coli [TaxId 100.0
d1x74a1359 2-methylacyl-CoA racemase Mcr {Mycobacterium tuber 100.0
d2vjma1427 Formyl-CoA transferase {Oxalobacter formigenes [Ta 100.0
d1l7da1183 Nicotinamide nucleotide transhydrogenase dI compon 94.02
d1pjca1168 L-alanine dehydrogenase {Phormidium lapideum [TaxI 93.35
d1li4a1163 S-adenosylhomocystein hydrolase {Human (Homo sapie 93.18
d1luaa1191 Methylene-tetrahydromethanopterin dehydrogenase {M 93.06
d1v8ba1163 S-adenosylhomocystein hydrolase {Plasmodium falcip 93.02
d1qp8a1181 Putative formate dehydrogenase {Archaeon Pyrobacul 92.79
d1pr9a_244 Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 92.32
d1j4aa1197 D-lactate dehydrogenase {Lactobacillus helveticus 90.43
d1cyda_242 Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 90.21
d1mx3a1193 Transcription corepressor CtbP {Human (Homo sapien 87.79
d1sc6a1188 Phosphoglycerate dehydrogenase {Escherichia coli [ 87.07
d2naca1188 Formate dehydrogenase {Pseudomonas sp., strain 101 86.83
d1ulsa_242 beta-keto acyl carrier protein reductase {Thermus 85.61
d1k2wa_256 Sorbitol dehydrogenase {Rhodobacter sphaeroides [T 85.4
d1ygya1184 Phosphoglycerate dehydrogenase {Mycobacterium tube 85.2
d2h7ma1268 Enoyl-ACP reductase {Mycobacterium tuberculosis, T 84.93
d1dxya1199 D-2-hydroxyisocaproate dehydrogenase {Lactobacillu 83.49
d1uzma1237 beta-keto acyl carrier protein reductase {Mycobact 82.77
d1ydea1250 Retinal dehydrogenase/reductase 3 {Human (Homo sap 82.67
d1h5qa_260 Mannitol dehydrogenase {Mushroom (Agaricus bisporu 82.12
d1gdha1191 D-glycerate dehydrogenase {Hyphomicrobium methylov 82.11
d1vl8a_251 Gluconate 5-dehydrogenase {Thermotoga maritima [Ta 82.08
d1q7ba_243 beta-keto acyl carrier protein reductase {Escheric 81.85
d2d1ya1248 Hypothetical protein TTHA0369 {Thermus thermophilu 81.0
d1nffa_244 Putative oxidoreductase Rv2002 {Mycobacterium tube 80.4
d2ag5a1245 Dehydrogenase/reductase SDR family member 6, DHRS6 80.15
>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-97  Score=735.90  Aligned_cols=368  Identities=23%  Similarity=0.322  Sum_probs=325.0

Q ss_pred             CCCCCcEEEEeCCcccHHHHHHHHHhcCCcEEEEccCCCC------CchhhhccCCcceEEeeCCCcchHHHHHHHHhcC
Q psy1367           1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ------PFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQS   74 (381)
Q Consensus         1 ~pL~GvrVld~~~~~agp~~~~~LadlGA~VikvE~p~~~------~~~~~~~nrgK~sv~ldl~~~~g~~~~~~L~~~a   74 (381)
                      +||+||||||||+++|||+||++||||||||||||+|+++      +.+|..+|||||||+||||+++||++|++||++|
T Consensus         7 gPL~GirVld~~~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~r~~~~~~~~~n~~K~si~ldl~~~~G~~~~~~Lv~~a   86 (402)
T d1xk7a1           7 GPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETT   86 (402)
T ss_dssp             STTTTCEEEEECCSSHHHHHHHHHHHTTCEEEEEECSSSCCGGGGSSSHHHHHTTTCEEEEECTTSHHHHHHHHHHHTTC
T ss_pred             cCCCCCEEEEeCChhHHHHHHHHHHHhCCeEEEECCCCCCCccccCCchhHHhCCCCeEEEEeCcCHHHHHHHHHHHhhc
Confidence            4999999999999999999999999999999999999854      4678889999999999999999999999999999


Q ss_pred             CEEEeCCCccHHHHcCCCHHHHhhhCCCcEEEEEeeCCCC--CCCCCCCchHHHHHHhhhcccccCCCCCCCCCCCCccc
Q psy1367          75 DVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD--GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAA  152 (381)
Q Consensus        75 Dv~i~n~~pg~~~~lGl~~~~l~~~nP~lI~~~isgfG~~--Gp~~~~~~~d~~~~A~sG~~~~~g~~~~~P~~~~~~~~  152 (381)
                      ||||+|||||+++||||||++|+++||+||||+|||||++  |||+++++||+++||+||+++.+|.++.+| +.+.+++
T Consensus        87 Dv~i~n~rpg~~~~lGl~~~~L~~~nP~lI~~sisgfG~~~~gp~~~~~~~D~~~qA~sG~~~~~G~~~~p~-~~~~~~~  165 (402)
T d1xk7a1          87 DIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPM-PAFPYTA  165 (402)
T ss_dssp             SEEEEECSSSHHHHTTCCHHHHHHHCTTCEEEEEESSCSSSCTTTTTSCCCHHHHHHHHTSGGGSEETTEEC-CCTTTHH
T ss_pred             CCceeeecccccccccccccchhhccccccceeeecccCCcCccccCCCCcccccccccchhhhcccccccc-ccccccc
Confidence            9999999999999999999999999999999999999987  789999999999999999999999887655 4555689


Q ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCCceEEEcChhhHHHHhhhhHhhhhcccC-CCCCCCCCCCCCCCccCeeeecCCCCE
Q psy1367         153 DFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFL-WDKPRGENLLDGGAHFYDTYETKDGRF  231 (381)
Q Consensus       153 d~~ag~~~aa~gilaAL~~R~rtG~Gq~VdvSl~ea~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~y~t~DG~~  231 (381)
                      |+.+| +++++|+|+||++|++||+||+|||||+|+++++....+..+.... ..+++..+..+ ..++|++|+|+|| |
T Consensus       166 d~~~g-~~aa~ailaAL~~r~~TG~Gq~VdvSm~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~y~~~DG-~  242 (402)
T d1xk7a1         166 DYFSG-LTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDP-YYAGCGLYKCADG-Y  242 (402)
T ss_dssp             HHHHH-HHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHTHHHHHHHHTTSCCCCCBBTTBCS-SBTTEEEEEETTE-E
T ss_pred             cccch-hhhhhhhHHHhhccccCCCccccccccccchhhhhhhcccccccccccccccccccCC-cccccCceecccC-c
Confidence            99987 9999999999999999999999999999999887665544433222 22222233333 3345999999999 8


Q ss_pred             EEEEecCHHHHHHHHHHcCCCCC-CCCcc-------------cHHHHHHHHHHHHhhcCHHHHHHHhhcCCCeEeeccCh
Q psy1367         232 MAVGALESQFYAQLLAGLGMTEE-ELPQH-------------EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL  297 (381)
Q Consensus       232 v~l~~~~~~~w~~l~~~lG~~~~-~~~~~-------------~~~~l~~~l~~~~~~~t~~ew~~~l~~a~vp~~~V~~~  297 (381)
                      |.+.+.++.+|++||+++|+++. .++++             +++++.+.+++||+++|++||.+.|++++|||+||+++
T Consensus       243 i~i~~~~~~~~~~l~~~~g~~~l~~dp~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~t~~e~~~~l~~~gvp~apV~~~  322 (402)
T d1xk7a1         243 IVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTV  322 (402)
T ss_dssp             EEEECCSHHHHHHHHHHHTCGGGTTSSSSCTTCCCCBTTTSTTHHHHHHHHHHHHHTSCHHHHHHHHHHTTCEEEECCCG
T ss_pred             cccccccccccccchhhhhcccccccccccccccccccchhhHHHHHHHHHHHHHhhccchhhhhhhhcCCceeecCCCH
Confidence            99999999999999999987652 23332             56789999999999999999999999999999999999


Q ss_pred             hhhhcCccccccccEEEcCC---c-ceeccCCccccCCCCCCCCCCCCCCCCcCHHHHHHhCCCCHHHHHHHHhCCeeec
Q psy1367         298 SQATSHPHNVHRGSFIPNRA---G-VVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVIEE  373 (381)
Q Consensus       298 ~e~~~~p~~~~rg~~~~~~~---g-~~~~~~~~~~~~~p~~~~~~~~aP~lGeht~evL~elG~s~~~I~~L~~~gvi~~  373 (381)
                      +|+++|||+++|++|+++++   + ..+++++++|++++....  .++|.+||||+|||+|||||+++|++|+++|||..
T Consensus       323 ~e~~~dpq~~~r~~~~~~~~~~~g~~~~p~~p~~fs~t~~~~~--~~aP~lGeht~eIL~eLG~s~~eI~~L~~~gvi~~  400 (402)
T d1xk7a1         323 PELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIW--RGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKV  400 (402)
T ss_dssp             GGSTTCHHHHHHTCEEEEECTTSCEEEEECCSSCCSSSCCCCC--CCCCCTTTTHHHHHHHTTCCHHHHHHHHHTTSEEC
T ss_pred             HHHHHCHHHHHhCCEEEEEcCCCCeeEeecCCcccCCCCCCCC--CCCCCCCccHHHHHHHcCCCHHHHHHHHHCcCEeC
Confidence            99999999999999998876   3 567888999999998654  37999999999999999999999999999999975


Q ss_pred             c
Q psy1367         374 T  374 (381)
Q Consensus       374 ~  374 (381)
                      +
T Consensus       401 ~  401 (402)
T d1xk7a1         401 E  401 (402)
T ss_dssp             C
T ss_pred             C
Confidence            3
>d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2vjma1 c.123.1.1 (A:2-428) Formyl-CoA transferase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} Back     information, alignment and structure
>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} Back     information, alignment and structure
>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Back     information, alignment and structure
>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Back     information, alignment and structure
>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} Back     information, alignment and structure
>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} Back     information, alignment and structure
>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} Back     information, alignment and structure
>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Back     information, alignment and structure
>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} Back     information, alignment and structure
>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Back     information, alignment and structure
>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} Back     information, alignment and structure
>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure