Psyllid ID: psy13712
Local Sequence Feature Prediction
Prediction and (Method) Result
Residue Number Marker Protein Sequence Secondary Structure (PSIPRED) Secondary Structure Prediction (SSPRO) Coil and Loop (DISEMBL) Flexible Loop (DISEMBL) Low Complexity Region (SEG) Disordered region (IsUnstruct) Disordered Region (DISOPRED) Disordered Region (DISEMBL) Disordered Region (DISPRO) Transmembrane Helix (TMHMM) Transmembrane Helix (HMMTOP) Transmembrane Helix (MEMSAT) TM Helix, Signal Peptide (MEMSAT_SVM) TM Helix, Signal Peptide (Phobius) Signal Peptide (SignalP HMM Mode) Signal Peptide (SignalP NN Mode) Coiled Coils (COILS) Positional Conservation
--------10--------20--------30--------40--------50--------60--- M N P F S S S S N P G F P S Y G N L Q I P L A N G N I M K I P V T S I N I S E E V N K T G I W K Q V N K G D K K V P P S K P R ccccccccccccccccE E E E E cccccE E E E E cccccH H H H H H cccccE E E ccccccccccccc ccccccccccccccccccE E E cccccE ccccccE E E ccH H H ccccE E E E E ccccccccccccc m n p f s s s s n p g f p s y g n l q i p l a n g n i m k i p v t s i n i s e e v n k t GIWKq v n k g d k k v p p s k p r m n p f s s s s n p g f p s YGNLQIPLANGNIMKIPVTSINISe e v n k t g i w k q v n k g d k k v p p s k p r Mn p f s s s s n p g f p s y g n LQIPLANGNIMKIPVTSINISEEVNKTGIWKQVNKGDKKVPPSKPR * * * * * * * * * * * * * * YGNLQIPLANGNIMKIPVTSINISEEVNKTGIWKQ* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * NLQIPLANGNIMKIPVTSINISEEVNKTGIW* * * * * * * * * * * * * * * * * * * * * * * * * * GFPSYGNLQIPLANGNIMKIPVTSINISEEVNKTGIWKQ* * * * * * * * * * * * * * * * * * * * * * NPGFPSYGNLQIPLANGNIMKIPVTSINISEEVNKTGIWKQVNKG* * * * * * * * * * ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo oooooooooooooooooooH H H H H H H H H H H H H H H H H H iiiiiiiiiiiiiiiiiiiiiiiiii ooooooooooooooooh h h h h h h h h h h h h h h h h h h h iiiiiiiiiiiiiiiiiiiiiiiiiii iiiiiiiiiiiiiiiiiih h h h h h h h h h h h h h h h ooooooooooooooooooooooooooooo ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx MNPFSSSSNPGFPSYGNLQIPLANGNIMKIPVTSINISEEVNKTGIWKQVNKGDKKVPPSKPR no confident homologs detected
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
GI Alignment Graph Length
Definition
Q cover
H cover
Identity
E-value Query 63
345486203 1193
PREDICTED: sodium-driven chloride bicarb
0.730
0.038
0.847
2e-14 345486201 1203
PREDICTED: sodium-driven chloride bicarb
0.730
0.038
0.847
2e-14 345486199 1226
PREDICTED: sodium-driven chloride bicarb
0.730
0.037
0.847
2e-14 383864837 1229
PREDICTED: sodium-driven chloride bicarb
0.809
0.041
0.686
4e-12 307188091 1225
Sodium-driven chloride bicarbonate excha
0.730
0.037
0.760
4e-12 332020115 1216
Sodium-driven chloride bicarbonate excha
0.777
0.040
0.734
5e-12 307213445 1196
Sodium-driven chloride bicarbonate excha
0.730
0.038
0.760
1e-11 328792294 1228
PREDICTED: sodium bicarbonate cotranspor
0.809
0.041
0.686
2e-11 380012200 1241
PREDICTED: LOW QUALITY PROTEIN: sodium b
0.809
0.041
0.686
2e-11 340709240 1231
PREDICTED: sodium-driven chloride bicarb
0.809
0.041
0.686
2e-11
>gi|345486203|ref|XP_003425423.1| PREDICTED: sodium-driven chloride bicarbonate exchanger-like isoform 3 [Nasonia vitripennis]
Back Hide alignment and taxonomy information
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/46 (84%), Positives = 43/46 (93%)
Query: 11 GFPSYGNLQIPLANGNIMKIPVTSINISEEVNKTGIWKQVNKGDKK 56
GF S GNLQIPLANGNIMKIP+TSINISEEVNKTGIW+QVN+G+ K
Sbjct: 1092 GFASSGNLQIPLANGNIMKIPLTSINISEEVNKTGIWQQVNEGNDK 1137
Source: Nasonia vitripennis
Species: Nasonia vitripennis
Genus: Nasonia
Family: Pteromalidae
Order: Hymenoptera
Class: Insecta
Phylum: Arthropoda
Superkingdom: Eukaryota
>gi|345486201|ref|XP_001603420.2| PREDICTED: sodium-driven chloride bicarbonate exchanger-like isoform 1 [Nasonia vitripennis]
Back Show alignment and taxonomy information
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/46 (84%), Positives = 43/46 (93%)
Query: 11 GFPSYGNLQIPLANGNIMKIPVTSINISEEVNKTGIWKQVNKGDKK 56
GF S GNLQIPLANGNIMKIP+TSINISEEVNKTGIW+QVN+G+ K
Sbjct: 1102 GFASSGNLQIPLANGNIMKIPLTSINISEEVNKTGIWQQVNEGNDK 1147
Source: Nasonia vitripennis
Species: Nasonia vitripennis
Genus: Nasonia
Family: Pteromalidae
Order: Hymenoptera
Class: Insecta
Phylum: Arthropoda
Superkingdom: Eukaryota
>gi|345486199|ref|XP_003425422.1| PREDICTED: sodium-driven chloride bicarbonate exchanger-like isoform 2 [Nasonia vitripennis]
Back Show alignment and taxonomy information
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/46 (84%), Positives = 43/46 (93%)
Query: 11 GFPSYGNLQIPLANGNIMKIPVTSINISEEVNKTGIWKQVNKGDKK 56
GF S GNLQIPLANGNIMKIP+TSINISEEVNKTGIW+QVN+G+ K
Sbjct: 1125 GFASSGNLQIPLANGNIMKIPLTSINISEEVNKTGIWQQVNEGNDK 1170
Source: Nasonia vitripennis
Species: Nasonia vitripennis
Genus: Nasonia
Family: Pteromalidae
Order: Hymenoptera
Class: Insecta
Phylum: Arthropoda
Superkingdom: Eukaryota
>gi|383864837|ref|XP_003707884.1| PREDICTED: sodium-driven chloride bicarbonate exchanger [Megachile rotundata]
Back Show alignment and taxonomy information
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 11 GFPSYGNLQIPLANGNIMKIPVTSINISEEVNKTGIWKQVNKGDKKVPPSK 61
G+ GN+QI LANGN+MKIP+TSINISEEVNKTGIW+QVN+G++K +K
Sbjct: 1113 GYGPSGNIQISLANGNVMKIPMTSINISEEVNKTGIWQQVNEGNEKTKQAK 1163
Source: Megachile rotundata
Species: Megachile rotundata
Genus: Megachile
Family: Megachilidae
Order: Hymenoptera
Class: Insecta
Phylum: Arthropoda
Superkingdom: Eukaryota
>gi|307188091|gb|EFN72923.1| Sodium-driven chloride bicarbonate exchanger [Camponotus floridanus]
Back Show alignment and taxonomy information
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 42/46 (91%)
Query: 16 GNLQIPLANGNIMKIPVTSINISEEVNKTGIWKQVNKGDKKVPPSK 61
GN+QI LANGNIMKIP+ SINISEEVNKTGIW+QVN+G++K+ SK
Sbjct: 1113 GNIQISLANGNIMKIPLASINISEEVNKTGIWQQVNEGNEKLKQSK 1158
Source: Camponotus floridanus
Species: Camponotus floridanus
Genus: Camponotus
Family: Formicidae
Order: Hymenoptera
Class: Insecta
Phylum: Arthropoda
Superkingdom: Eukaryota
>gi|332020115|gb|EGI60561.1| Sodium-driven chloride bicarbonate exchanger [Acromyrmex echinatior]
Back Show alignment and taxonomy information
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 42/49 (85%)
Query: 13 PSYGNLQIPLANGNIMKIPVTSINISEEVNKTGIWKQVNKGDKKVPPSK 61
P GN+QI LANGNIMKIP+ SINISEEVNKTGIW+QVN+G++K SK
Sbjct: 1117 PPAGNIQISLANGNIMKIPLASINISEEVNKTGIWQQVNEGNEKTKQSK 1165
Source: Acromyrmex echinatior
Species: Acromyrmex echinatior
Genus: Acromyrmex
Family: Formicidae
Order: Hymenoptera
Class: Insecta
Phylum: Arthropoda
Superkingdom: Eukaryota
>gi|307213445|gb|EFN88867.1| Sodium-driven chloride bicarbonate exchanger [Harpegnathos saltator]
Back Show alignment and taxonomy information
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 16 GNLQIPLANGNIMKIPVTSINISEEVNKTGIWKQVNKGDKKVPPSK 61
GN+QI LANGNIMKIP+ SINISEEVNKTGIW+QVN+G++K SK
Sbjct: 1100 GNIQISLANGNIMKIPLASINISEEVNKTGIWQQVNEGNEKSKQSK 1145
Source: Harpegnathos saltator
Species: Harpegnathos saltator
Genus: Harpegnathos
Family: Formicidae
Order: Hymenoptera
Class: Insecta
Phylum: Arthropoda
Superkingdom: Eukaryota
>gi|328792294|ref|XP_393286.4| PREDICTED: sodium bicarbonate cotransporter 3-like isoform 1 [Apis mellifera]
Back Show alignment and taxonomy information
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 11 GFPSYGNLQIPLANGNIMKIPVTSINISEEVNKTGIWKQVNKGDKKVPPSK 61
G+ GN+QI LANGNIMKIP+ SINISEEVNKTGIW+QVN+G++K+ K
Sbjct: 1112 GYGPSGNIQISLANGNIMKIPMASINISEEVNKTGIWQQVNEGNEKMKQVK 1162
Source: Apis mellifera
Species: Apis mellifera
Genus: Apis
Family: Apidae
Order: Hymenoptera
Class: Insecta
Phylum: Arthropoda
Superkingdom: Eukaryota
>gi|380012200|ref|XP_003690174.1| PREDICTED: LOW QUALITY PROTEIN: sodium bicarbonate cotransporter 3-like [Apis florea]
Back Show alignment and taxonomy information
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 11 GFPSYGNLQIPLANGNIMKIPVTSINISEEVNKTGIWKQVNKGDKKVPPSK 61
G+ GN+QI LANGNIMKIP+ SINISEEVNKTGIW+QVN+G++K+ K
Sbjct: 1125 GYGPSGNIQISLANGNIMKIPMASINISEEVNKTGIWQQVNEGNEKMKQVK 1175
Source: Apis florea
Species: Apis florea
Genus: Apis
Family: Apidae
Order: Hymenoptera
Class: Insecta
Phylum: Arthropoda
Superkingdom: Eukaryota
>gi|340709240|ref|XP_003393219.1| PREDICTED: sodium-driven chloride bicarbonate exchanger-like [Bombus terrestris]
Back Show alignment and taxonomy information
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 42/51 (82%)
Query: 11 GFPSYGNLQIPLANGNIMKIPVTSINISEEVNKTGIWKQVNKGDKKVPPSK 61
G+ GN+QI LANGNIMKIP+ SINISEEVNKTGIW+QVN+G++K K
Sbjct: 1115 GYGPSGNIQISLANGNIMKIPMASINISEEVNKTGIWQQVNEGNEKTKQVK 1165
Source: Bombus terrestris
Species: Bombus terrestris
Genus: Bombus
Family: Apidae
Order: Hymenoptera
Class: Insecta
Phylum: Arthropoda
Superkingdom: Eukaryota
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
ID
Alignment graph
Length
Definition
Q cover
H cover
Identity
E-value Query 63
UNIPROTKB|G5EC65 1119
abts-1 "Anion transporter ABTS
0.619
0.034
0.434
0.00034 UNIPROTKB|G5EDF4 1161
abts-1 "Protein ABTS-1, isofor
0.619
0.033
0.434
0.00035 WB|WBGene00009920 1215
abts-1 [Caenorhabditis elegans
0.619
0.032
0.434
0.00037 UNIPROTKB|B3WFV9 1215
abts-1 "Protein ABTS-1, isofor
0.619
0.032
0.434
0.00037
UNIPROTKB|G5EC65 abts-1 "Anion transporter ABTS-1" [Caenorhabditis elegans (taxid:6239)]
Back Hide alignment and assigned GO terms
Score = 102 (41.0 bits), Expect = 0.00034, P = 0.00034
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 18 LQIPLANGNIMKIPVT-------SINISEEVNKTGIWKQVNKGDKK 56
L IP+A+GN++KIP+ SIN+++EVN +G+WK + D K
Sbjct: 1004 LHIPMASGNVIKIPLAAIQEPSHSINLTKEVNNSGMWKHITSVDSK 1049
UNIPROTKB|G5EDF4 abts-1 "Protein ABTS-1, isoform b" [Caenorhabditis elegans (taxid:6239)]
Back Show alignment and assigned GO terms
Score = 102 (41.0 bits), Expect = 0.00035, P = 0.00035
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 18 LQIPLANGNIMKIPVT-------SINISEEVNKTGIWKQVNKGDKK 56
L IP+A+GN++KIP+ SIN+++EVN +G+WK + D K
Sbjct: 1046 LHIPMASGNVIKIPLAAIQEPSHSINLTKEVNNSGMWKHITSVDSK 1091
WB|WBGene00009920 abts-1 [Caenorhabditis elegans (taxid:6239)]
Back Show alignment and assigned GO terms
Score = 102 (41.0 bits), Expect = 0.00037, P = 0.00037
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 18 LQIPLANGNIMKIPVT-------SINISEEVNKTGIWKQVNKGDKK 56
L IP+A+GN++KIP+ SIN+++EVN +G+WK + D K
Sbjct: 1100 LHIPMASGNVIKIPLAAIQEPSHSINLTKEVNNSGMWKHITSVDSK 1145
GO:0005452 GO:0006820 GO:0016020 GO:0016021 GO:0008509 GO:0040018 GO:0015301 GO:0015108 GO:0046685 GO:0007271 GO:0032228 GO:0005887
UNIPROTKB|B3WFV9 abts-1 "Protein ABTS-1, isoform c" [Caenorhabditis elegans (taxid:6239)]
Back Show alignment and assigned GO terms
Score = 102 (41.0 bits), Expect = 0.00037, P = 0.00037
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 18 LQIPLANGNIMKIPVT-------SINISEEVNKTGIWKQVNKGDKK 56
L IP+A+GN++KIP+ SIN+++EVN +G+WK + D K
Sbjct: 1100 LHIPMASGNVIKIPLAAIQEPSHSINLTKEVNNSGMWKHITSVDSK 1145
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.131 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 63 47 0.00091 102 3 11 23 0.42 27
29 0.47 25
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 353 (38 KB)
Total size of DFA: 62 KB (2061 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 7.08u 0.20s 7.28t Elapsed: 00:00:00
Total cpu time: 7.08u 0.20s 7.28t Elapsed: 00:00:00
Start: Thu Aug 15 14:36:39 2013 End: Thu Aug 15 14:36:39 2013
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Homologous Structure Templates
Homologous Structure Domains
