Psyllid ID: psy13781

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-----
YLNGVDRSCRQVNRVLYSRYEKLYSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKANPQRYEKLYSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGE
cccccccccEEEccccccccccccccccccccccccccccccccccccccEEEEEHHHHHHHccccccccccccccHHHHHHHHHcccEEEEccccccEEEEcccccccccHHHHHHHHHHccccccccccEEEEEEEEEEEEccEEEEEEEEcc
ccccccccHHHHHHHHHHHHHHHccccccHHHHHHHccccEccccHccccEEEccHHHHHHccccccccccEccHHHHHHHHHHHcccccEcccccccEEEEcccccccccHHHHHHHHHHHHHHcccccccEEEEEEEEEccccEEEEEEEccc
ylngvdrsCRQVNRVLYSRYEKLYSghkrykkdgltslkYKVIDTKQHKLFTWFLVQLGELVNGFsneywgwggedddmSNRVKAAGLqiiryppdiakYSMLRHrkekanpqrYEKLYSGhkrykkdgltslkYKVIDTKQHKLFTWFLVQLGE
ylngvdrscrqvNRVLYSRyeklysghkrykkdgltsLKYKVIDTKQHKLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMlrhrkekanpqryeklysghkrykkdgltSLKYKVIDTKQHKLFTWFLVQLGE
YLNGVDRSCRQVNRVLYSRYEKLYSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKANPQRYEKLYSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGE
********CRQVNRVLYSRYEKLYSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSML*************KLYSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQL**
**NG*DRSCRQVNRVLYSRYEKLYSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKANPQRYEKLYSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGE
YLNGVDRSCRQVNRVLYSRYEKLYSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKANPQRYEKLYSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGE
*LNGVDRSCRQVNRVLYSRYEKLYSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKANPQRYEKLYSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGE
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
YLNGVDRSCRQVNRVLYSRYEKLYSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKANPQRYEKLYSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query155 2.2.26 [Sep-21-2011]
A8Y1P7384 Beta-1,4-N-acetylgalactos N/A N/A 0.606 0.244 0.474 2e-21
Q9GUM2383 Beta-1,4-N-acetylgalactos yes N/A 0.606 0.245 0.453 5e-21
O60909372 Beta-1,4-galactosyltransf yes N/A 0.6 0.25 0.427 6e-19
Q9Z2Y2369 Beta-1,4-galactosyltransf yes N/A 0.606 0.254 0.422 8e-19
Q80WN9369 Beta-1,4-galactosyltransf yes N/A 0.6 0.252 0.437 8e-19
Q5EA87396 Beta-1,4-galactosyltransf no N/A 0.6 0.234 0.406 5e-18
Q91YY2395 Beta-1,4-galactosyltransf no N/A 0.6 0.235 0.406 6e-18
Q6P768395 Beta-1,4-galactosyltransf no N/A 0.6 0.235 0.406 6e-18
Q5NVN3393 Beta-1,4-galactosyltransf no N/A 0.6 0.236 0.406 6e-18
Q80WN8395 Beta-1,4-galactosyltransf no N/A 0.6 0.235 0.406 6e-18
>sp|A8Y1P7|BRE4_CAEBR Beta-1,4-N-acetylgalactosaminyltransferase bre-4 OS=Caenorhabditis briggsae GN=bre-4 PE=3 SV=1 Back     alignment and function desciption
 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/97 (47%), Positives = 66/97 (68%), Gaps = 3/97 (3%)

Query: 62  VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKANP---QRYEKL 118
           +NGFSN++WGWGGEDDD++ R   AGL++ RYP  IA+Y M++H  E  NP    RY+ +
Sbjct: 273 INGFSNDFWGWGGEDDDLATRTSQAGLKVSRYPAQIARYKMIKHSTEATNPVNKCRYKIM 332

Query: 119 YSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGE 155
               +R+K DGL+SLKYK++  +   L+T  +V L E
Sbjct: 333 GQTKRRWKTDGLSSLKYKLVKLELKPLYTRAVVDLLE 369
Catalyzes the transfer of galactose onto proteins or lipids. Required for susceptibility to pore-forming crystal toxins in conjunction with bre-1, bre-2 and bre-3.
Caenorhabditis briggsae (taxid: 6238)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q9GUM2|BRE4_CAEEL Beta-1,4-N-acetylgalactosaminyltransferase bre-4 OS=Caenorhabditis elegans GN=bre-4 PE=1 SV=1 Back     alignment and function description
>sp|O60909|B4GT2_HUMAN Beta-1,4-galactosyltransferase 2 OS=Homo sapiens GN=B4GALT2 PE=1 SV=1 Back     alignment and function description
>sp|Q9Z2Y2|B4GT2_MOUSE Beta-1,4-galactosyltransferase 2 OS=Mus musculus GN=B4galt2 PE=2 SV=1 Back     alignment and function description
>sp|Q80WN9|B4GT2_CRIGR Beta-1,4-galactosyltransferase 2 OS=Cricetulus griseus GN=B4GALT2 PE=2 SV=1 Back     alignment and function description
>sp|Q5EA87|B4GT3_BOVIN Beta-1,4-galactosyltransferase 3 OS=Bos taurus GN=B4GALT3 PE=2 SV=2 Back     alignment and function description
>sp|Q91YY2|B4GT3_MOUSE Beta-1,4-galactosyltransferase 3 OS=Mus musculus GN=B4galt3 PE=1 SV=1 Back     alignment and function description
>sp|Q6P768|B4GT3_RAT Beta-1,4-galactosyltransferase 3 OS=Rattus norvegicus GN=B4galt3 PE=2 SV=1 Back     alignment and function description
>sp|Q5NVN3|B4GT3_PONAB Beta-1,4-galactosyltransferase 3 OS=Pongo abelii GN=B4GALT3 PE=2 SV=1 Back     alignment and function description
>sp|Q80WN8|B4GT3_CRIGR Beta-1,4-galactosyltransferase 3 OS=Cricetulus griseus GN=B4GALT3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query155
383865407 399 PREDICTED: beta-1,4-N-acetylgalactosamin 0.6 0.233 0.634 2e-30
332022445187 Beta-1,4-N-acetylgalactosaminyltransfera 0.606 0.502 0.627 2e-30
157131163 484 beta-1,4-galactosyltransferase [Aedes ae 0.606 0.194 0.617 5e-30
383865405254 PREDICTED: beta-1,4-N-acetylgalactosamin 0.6 0.366 0.634 5e-30
350401522 398 PREDICTED: beta-1,4-N-acetylgalactosamin 0.6 0.233 0.612 6e-30
340729171 398 PREDICTED: beta-1,4-N-acetylgalactosamin 0.6 0.233 0.612 6e-30
380030125 395 PREDICTED: beta-1,4-N-acetylgalactosamin 0.6 0.235 0.612 9e-30
328775879 395 PREDICTED: beta-1,4-N-acetylgalactosamin 0.6 0.235 0.612 1e-29
307215500129 Beta-1,4-N-acetylgalactosaminyltransfera 0.606 0.728 0.617 1e-29
193624996 354 PREDICTED: beta-1,4-N-acetylgalactosamin 0.606 0.265 0.648 2e-29
>gi|383865407|ref|XP_003708165.1| PREDICTED: beta-1,4-N-acetylgalactosaminyltransferase bre-4-like [Megachile rotundata] Back     alignment and taxonomy information
 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 78/93 (83%)

Query: 61  LVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKANPQRYEKLYS 120
           LVNGFSN YWGWGGEDDDM+NR+KA GL I RYP ++A+Y ML H+KEKANP+RYE L +
Sbjct: 301 LVNGFSNVYWGWGGEDDDMANRIKAHGLHISRYPANVARYKMLTHKKEKANPKRYEYLKT 360

Query: 121 GHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQL 153
           G KR+  DGL++L+Y+++D ++ KL+TW LV+L
Sbjct: 361 GKKRFTTDGLSNLQYELVDKQKPKLYTWLLVKL 393

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|332022445|gb|EGI62753.1| Beta-1,4-N-acetylgalactosaminyltransferase bre-4 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|157131163|ref|XP_001662147.1| beta-1,4-galactosyltransferase [Aedes aegypti] gi|108871640|gb|EAT35865.1| AAEL012002-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|383865405|ref|XP_003708164.1| PREDICTED: beta-1,4-N-acetylgalactosaminyltransferase bre-4-like, partial [Megachile rotundata] Back     alignment and taxonomy information
>gi|350401522|ref|XP_003486181.1| PREDICTED: beta-1,4-N-acetylgalactosaminyltransferase bre-4-like isoform 1 [Bombus impatiens] gi|350401524|ref|XP_003486182.1| PREDICTED: beta-1,4-N-acetylgalactosaminyltransferase bre-4-like isoform 2 [Bombus impatiens] Back     alignment and taxonomy information
>gi|340729171|ref|XP_003402881.1| PREDICTED: beta-1,4-N-acetylgalactosaminyltransferase bre-4-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|380030125|ref|XP_003698706.1| PREDICTED: beta-1,4-N-acetylgalactosaminyltransferase bre-4-like [Apis florea] Back     alignment and taxonomy information
>gi|328775879|ref|XP_394839.3| PREDICTED: beta-1,4-N-acetylgalactosaminyltransferase bre-4 [Apis mellifera] Back     alignment and taxonomy information
>gi|307215500|gb|EFN90152.1| Beta-1,4-N-acetylgalactosaminyltransferase bre-4 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|193624996|ref|XP_001949222.1| PREDICTED: beta-1,4-N-acetylgalactosaminyltransferase bre-4-like isoform 1 [Acyrthosiphon pisum] gi|328709711|ref|XP_003244049.1| PREDICTED: beta-1,4-N-acetylgalactosaminyltransferase bre-4-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query155
FB|FBgn0027538403 beta4GalNAcTA "beta4GalNAcTA" 0.606 0.233 0.574 8.2e-28
WB|WBGene00000269383 bre-4 [Caenorhabditis elegans 0.606 0.245 0.453 7.1e-21
UNIPROTKB|Q9GUM2383 bre-4 "Beta-1,4-N-acetylgalact 0.606 0.245 0.453 7.1e-21
ZFIN|ZDB-GENE-070912-258379 b4galt2 "UDP-Gal:betaGlcNAc be 0.606 0.248 0.422 3.3e-20
UNIPROTKB|A6QQY5369 B4GALT2 "B4GALT2 protein" [Bos 0.6 0.252 0.437 1.4e-19
MGI|MGI:1858493369 B4galt2 "UDP-Gal:betaGlcNAc be 0.606 0.254 0.422 3.1e-19
RGD|1305358369 B4galt2 "UDP-Gal:betaGlcNAc be 0.606 0.254 0.422 3.1e-19
UNIPROTKB|F1N8F7373 B4GALT2 "Uncharacterized prote 0.6 0.249 0.395 3.3e-19
UNIPROTKB|J9P8C7369 B4GALT2 "Uncharacterized prote 0.6 0.252 0.427 4e-19
UNIPROTKB|O60909372 B4GALT2 "Beta-1,4-galactosyltr 0.6 0.25 0.427 4.3e-19
FB|FBgn0027538 beta4GalNAcTA "beta4GalNAcTA" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 54/94 (57%), Positives = 72/94 (76%)

Query:    60 ELVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKANPQRYEKLY 119
             + VNGFSN ++GWGGEDDDMSNR+K A L I RYP +IA+Y ML+H+KEKANP+RYE L 
Sbjct:   303 QAVNGFSNSFFGWGGEDDDMSNRLKHANLFISRYPVNIARYKMLKHQKEKANPKRYENLQ 362

Query:   120 SGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQL 153
             +G  + ++DG+ S+KY +   KQ   FTW+L +L
Sbjct:   363 NGMSKIEQDGINSIKYSIYSIKQFPTFTWYLAEL 396
GO:0007291 "sperm individualization" evidence=IMP
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0008376 "acetylgalactosaminyltransferase activity" evidence=IDA
GO:0008344 "adult locomotory behavior" evidence=IMP
GO:0006044 "N-acetylglucosamine metabolic process" evidence=IDA
GO:0007528 "neuromuscular junction development" evidence=IMP
GO:0033842 "N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase activity" evidence=IDA
GO:0009247 "glycolipid biosynthetic process" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
WB|WBGene00000269 bre-4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q9GUM2 bre-4 "Beta-1,4-N-acetylgalactosaminyltransferase bre-4" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070912-258 b4galt2 "UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|A6QQY5 B4GALT2 "B4GALT2 protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1858493 B4galt2 "UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1305358 B4galt2 "UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1N8F7 B4GALT2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|J9P8C7 B4GALT2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|O60909 B4GALT2 "Beta-1,4-galactosyltransferase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query155
cd00899219 cd00899, b4GalT, Beta-4-Galactosyltransferase is i 5e-35
pfam0270978 pfam02709, Glyco_transf_7C, N-terminal domain of g 3e-19
cd00899219 cd00899, b4GalT, Beta-4-Galactosyltransferase is i 0.001
>gnl|CDD|132999 cd00899, b4GalT, Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids Back     alignment and domain information 
 Score =  120 bits (304), Expect = 5e-35
 Identities = 49/95 (51%), Positives = 61/95 (64%), Gaps = 3/95 (3%)

Query: 60  ELVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEK---ANPQRYE 116
             VNGFSN YWGWGGEDDD+ NR+KAAGL+I R   D  +Y M+RH  +K    NP R+ 
Sbjct: 124 RKVNGFSNAYWGWGGEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPNRFA 183

Query: 117 KLYSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLV 151
            L +  +R   DGL SLKYKV+  +   L+T  LV
Sbjct: 184 LLQNSRERDHSDGLNSLKYKVLSIELAPLYTNILV 218

Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen. Length = 219
>gnl|CDD|217196 pfam02709, Glyco_transf_7C, N-terminal domain of galactosyltransferase Back     alignment and domain information
>gnl|CDD|132999 cd00899, b4GalT, Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 155
KOG3916|consensus372 100.0
cd00899219 b4GalT Beta-4-Galactosyltransferase is involved in 100.0
PF0270978 Glyco_transf_7C: N-terminal domain of galactosyltr 99.86
KOG3917|consensus310 99.68
PF10111281 Glyco_tranf_2_2: Glycosyltransferase like family 2 98.74
KOG3916|consensus372 98.74
KOG3588|consensus494 98.32
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 98.09
cd00899219 b4GalT Beta-4-Galactosyltransferase is involved in 97.78
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 97.73
PF05679499 CHGN: Chondroitin N-acetylgalactosaminyltransferas 97.12
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 96.47
COG1216305 Predicted glycosyltransferases [General function p 96.24
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 96.16
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 96.01
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 95.99
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 95.11
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 95.04
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 95.03
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 94.72
COG4092346 Predicted glycosyltransferase involved in capsule 94.53
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 94.32
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 94.22
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 94.15
PRK14583 444 hmsR N-glycosyltransferase; Provisional 94.07
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 93.95
PRK11204 420 N-glycosyltransferase; Provisional 93.78
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 93.43
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 93.24
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 92.81
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 92.12
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 91.27
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 91.1
KOG3736|consensus 578 89.58
COG1215 439 Glycosyltransferases, probably involved in cell wa 89.34
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 87.27
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 86.78
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 85.45
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 82.04
TIGR03111 439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 80.89
>KOG3916|consensus Back     alignment and domain information 
Probab=100.00  E-value=4e-46  Score=311.36  Aligned_cols=148  Identities=35%  Similarity=0.632  Sum_probs=140.7

Q ss_pred             ccccccCCC--hhhhHHHHh--cccccccccccceeeEeeeccCcceeEEeeehhcccccCCCCCcccCCCCChhHHHHH
Q psy13781          8 SCRQVNRVL--YSRYEKLYS--GHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRV   83 (155)
Q Consensus         8 ~~~~~n~~n--~~R~~~L~~--~~~r~~~DGLnsl~Yk~~~~~~~gl~t~i~~~~f~~vNGf~n~~~GwG~EDddl~~Rl   83 (155)
                      .|--+++|.  |+.-.+|+.  .++|+.+.+++++.|++++...+|++++++++||.+||||||.|||||||||||..|+
T Consensus       217 dCfIFHDVDllPenDrNlY~C~~~PRH~sva~dk~gy~LPY~~~FGGVsalt~~qf~kINGFsN~fWGWGGEDDDl~nRv  296 (372)
T KOG3916|consen  217 DCFIFHDVDLLPENDRNLYGCPEQPRHMSVALDKFGYRLPYKEYFGGVSALTKEQFRKINGFSNAFWGWGGEDDDLWNRV  296 (372)
T ss_pred             CEEEEecccccccCCCCccCCCCCCcchhhhhhhccccccchhhhCchhhccHHHHHHhcCCCchhcccCCcchHHHHHH
Confidence            476677666  888888886  5699999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCceEEecCCCceeEeeeec--CCCCCChhhHHHHhhcCeeeccCCCceeeEEEeEEEeeccEEEEEEEecC
Q psy13781         84 KAAGLQIIRYPPDIAKYSMLRH--RKEKANPQRYEKLYSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGE  155 (155)
Q Consensus        84 ~~~g~~i~r~~~~~~~y~~i~H--~~~~~n~~r~~~l~~~~~~~~~dGL~sl~Y~~~~~~~~~lyt~i~vdi~~  155 (155)
                      ..+|++|+||+..+|||+||+|  +++++|++|+++|..++.+|..||||||.|++++++.+||||||+|||++
T Consensus       297 ~~ag~~IsRp~~~igrYkMikH~~k~n~~n~~Ry~lL~~tk~r~~~DGLnsl~Y~~~~v~~~pLyt~itVDl~~  370 (372)
T KOG3916|consen  297 QLAGMKISRPPPEIGRYKMIKHHDKGNEPNPGRYKLLRNTKERQTQDGLNSLKYQLLKVELDPLYTNITVDLGP  370 (372)
T ss_pred             HhcCceeecCCCccceeEEeecccccCCCChHHHHHHHhhhhhhhhccccceeeeeeeeecccceEEEEEeccc
Confidence            9999999999999999999999  77899999999999999999999999999999999999999999999985

>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids Back     alignment and domain information
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases Back     alignment and domain information
>KOG3917|consensus Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information
>KOG3916|consensus Back     alignment and domain information
>KOG3588|consensus Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>KOG3736|consensus Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query155
1fr8_A288 Crystal Structure Of The Bovine Beta 1,4 Galactosyl 7e-18
1fgx_A288 Crystal Structure Of The Bovine Beta 1,4 Galactosyl 7e-18
1nf5_B286 Crystal Structure Of Lactose Synthase, Complex With 9e-18
1yro_B286 Crystal Structure Of Beta14,-Galactosyltransferase 9e-18
1nmm_B286 Beta-1,4-Galactosyltransferase Mutant Cys342thr Com 1e-17
2ae7_A287 Crystal Structure Of Human M340h-Beta1,4-Galactosyl 4e-17
1tvy_A286 Beta-1,4-Galactosyltransferase Mutant Met344his (M3 8e-17
2fyd_B286 Catalytic Domain Of Bovine Beta 1, 4-Galactosyltran 1e-16
1nhe_B286 Crystal Structure Of Lactose Synthase Complex With 1e-16
1pzy_B286 W314a-Beta1,4-Galactosyltransferase-I Complexed Wit 2e-16
3lw6_A287 Crystal Structure Of Drosophila Beta1,4-Galactosylt 1e-07
>pdb|1FR8|A Chain A, Crystal Structure Of The Bovine Beta 1,4 Galactosyltransferase (B4galt1) Catalytic Domain Complexed With Uridine Diphosphogalactose Length = 288 Back     alignment and structure 
Iteration: 1

 Score = 86.3 bits (212), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 62  VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEK---ANPQRYEKL 118
           +NGF N YWGWGGEDDD+ NR+   G+ + R    I K  M+RH ++K    NPQR++++
Sbjct: 190 INGFPNNYWGWGGEDDDIYNRLAFRGMSVSRPNAVIGKCRMIRHSRDKKNEPNPQRFDRI 249
Query: 119 YSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLG 154
               +    DGL SL Y V++ +++ L+T   V +G
Sbjct: 250 AHTKETMLSDGLNSLTYMVLEVQRYPLYTKITVDIG 285
>pdb|1FGX|A Chain A, Crystal Structure Of The Bovine Beta 1,4 Galactosyltransferase (B4galt1) Catalytic Domain Complexed With Ump Length = 288 Back     alignment and structure
>pdb|1NF5|B Chain B, Crystal Structure Of Lactose Synthase, Complex With Glucose Length = 286 Back     alignment and structure
>pdb|1YRO|B Chain B, Crystal Structure Of Beta14,-Galactosyltransferase Mutant Arg228lys In Complex With Alpha-Lactalbumin In The Presence Of Udp-Galactose And Mn Length = 286 Back     alignment and structure
>pdb|1NMM|B Chain B, Beta-1,4-Galactosyltransferase Mutant Cys342thr Complex With Alpha- Lactalbumin And Glcnac Length = 286 Back     alignment and structure
>pdb|2AE7|A Chain A, Crystal Structure Of Human M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1) In Complex With Pentasaccharide Length = 287 Back     alignment and structure
>pdb|1TVY|A Chain A, Beta-1,4-Galactosyltransferase Mutant Met344his (M344h-Gal- T1) Complex With Udp-Galactose And Manganese Length = 286 Back     alignment and structure
>pdb|2FYD|B Chain B, Catalytic Domain Of Bovine Beta 1, 4-Galactosyltransferase In Complex With Alpha-Lactalbumin, Glucose, Mn, And Udp-N- Acetylgalactosamine Length = 286 Back     alignment and structure
>pdb|1NHE|B Chain B, Crystal Structure Of Lactose Synthase Complex With Udp Length = 286 Back     alignment and structure
>pdb|1PZY|B Chain B, W314a-Beta1,4-Galactosyltransferase-I Complexed With Alpha-Lactalbumin In The Presence Of N-Acetylglucosamine, Udp And Manganese Length = 286 Back     alignment and structure
>pdb|3LW6|A Chain A, Crystal Structure Of Drosophila Beta1,4-Galactosyltransferas Length = 287 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query155
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 1e-26
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 7e-08
3lw6_A287 FI08434P, beta-4-galactosyltransferase 7; protein- 3e-24
3lw6_A287 FI08434P, beta-4-galactosyltransferase 7; protein- 3e-05
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Length = 287 Back     alignment and structure
 Score =  100 bits (250), Expect = 1e-26
 Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 3/134 (2%)

Query: 24  YSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRV 83
                R+    +    + +   +     +    Q    +NGF N YWGWGGEDDD+ NR+
Sbjct: 151 CFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRL 210

Query: 84  KAAGLQIIRYPPDIAKYSMLRHRKEKA---NPQRYEKLYSGHKRYKKDGLTSLKYKVIDT 140
              G+ I R    +     +RH ++K    NPQR++++    +    DGL SL Y+V+D 
Sbjct: 211 VFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSLTYQVLDV 270

Query: 141 KQHKLFTWFLVQLG 154
           +++ L+T   V +G
Sbjct: 271 QRYPLYTQITVDIG 284
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Length = 287 Back     alignment and structure
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster} Length = 287 Back     alignment and structure
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster} Length = 287 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query155
3lw6_A287 FI08434P, beta-4-galactosyltransferase 7; protein- 99.96
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 99.94
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 97.47
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 97.24
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 97.18
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 97.17
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 97.02
2nxv_A249 ATP synthase subunits region ORF 6; majastridin, A 96.36
3bcv_A240 Putative glycosyltransferase protein; protein stru 95.66
3lw6_A287 FI08434P, beta-4-galactosyltransferase 7; protein- 95.17
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 93.62
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 92.08
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 88.35
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 81.08
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster} Back     alignment and structure
Probab=99.96  E-value=2.7e-30  Score=212.37  Aligned_cols=144  Identities=23%  Similarity=0.292  Sum_probs=119.3

Q ss_pred             cccccCCC--hhhhHHHHhc----ccccccccccceeeEeeeccCcceeEEeeehhcccccCCCCCcccCCCCChhHHHH
Q psy13781          9 CRQVNRVL--YSRYEKLYSG----HKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNR   82 (155)
Q Consensus         9 ~~~~n~~n--~~R~~~L~~~----~~r~~~DGLnsl~Yk~~~~~~~gl~t~i~~~~f~~vNGf~n~~~GwG~EDddl~~R   82 (155)
                      |--.+++.  |..-.+++..    .+++.+..  .+.|++++...+|+++++++++|++||||||.|||||+||+||+.|
T Consensus       116 ~~ifHDVDLlP~dd~n~Y~c~~~~~P~Hls~~--~~~~~~~Y~~~~GGv~a~~re~f~kVNGFsn~f~GWGgEDdD~~~R  193 (287)
T 3lw6_A          116 YIAMHDVDLLPLNDNLLYEYPSSLGPLHIAGP--KLHPKYHYDNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVR  193 (287)
T ss_dssp             EEEEECTTEEECCTTSCCCCCCTTCCEESSCT--TTCSSCCCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHH
T ss_pred             EEEEecccccccCCCccccCCCCCCceEEeec--cccCCCCcCCccccEEeccHHHHHHcCCCCCcCcCCCccchHHHHH
Confidence            44444444  5555555542    46666653  4667888999999999999999999999999999999999999999


Q ss_pred             HHhcCceEEecCC-CceeEeeeecCCC-----CCChhhHHHHhhcCeeeccCCCceeeEEEeEEEee------ccEEEEE
Q psy13781         83 VKAAGLQIIRYPP-DIAKYSMLRHRKE-----KANPQRYEKLYSGHKRYKKDGLTSLKYKVIDTKQH------KLFTWFL  150 (155)
Q Consensus        83 l~~~g~~i~r~~~-~~~~y~~i~H~~~-----~~n~~r~~~l~~~~~~~~~dGL~sl~Y~~~~~~~~------~lyt~i~  150 (155)
                      +..+|+++.||+. .+|+|+|+.|.+.     +.++.|+.++..+.+|+..||||||+|++++++.-      .+++||.
T Consensus       194 l~~~G~~i~Rp~~~~~gry~m~~H~hd~~~r~rd~~k~~~~~~~~~~r~~~dGLnsl~Y~v~s~~~~~i~~~~~~~~nv~  273 (287)
T 3lw6_A          194 IRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKRDTQKCFNQKEMTRKRDHKTGLDNVKYKILKVHEMLIDQVPVTILNIL  273 (287)
T ss_dssp             HHHTTCCCBCCSSCCCCTTTSEEECCCTTTSCCCCCCCTTHHHHHTSCCSSCSGGGCCEEEEEEEEEEETTEEEEEEEEE
T ss_pred             HHHcCCcEEcCCCccccceeEEeccccccccCCcccchhhhhhhhcEEccCCCCeeeEEEEEEEEEEEecCCCcEEEEEE
Confidence            9999999999986 7999999998432     24566888888999999999999999999998877      8999999


Q ss_pred             EEec
Q psy13781        151 VQLG  154 (155)
Q Consensus       151 vdi~  154 (155)
                      ++..
T Consensus       274 l~c~  277 (287)
T 3lw6_A          274 LDCD  277 (287)
T ss_dssp             ECCC
T ss_pred             EEcC
Confidence            8754
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster} Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 155
d1pzta_271 c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4Ga 8e-32
d1pzta_271 c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4Ga 3e-08
>d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos taurus) [TaxId: 9913]} Length = 271 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: beta 1,4 galactosyltransferase (b4GalT1)
domain: beta 1,4 galactosyltransferase (b4GalT1)
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  112 bits (281), Expect = 8e-32
 Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 3/98 (3%)

Query: 60  ELVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRH---RKEKANPQRYE 116
             +NGF N YWG GGEDDD+ NR+   G+ + R    I K  M+RH   +K + NPQR++
Sbjct: 171 LSINGFPNNYWGAGGEDDDIYNRLAFRGMSVSRPNAVIGKTRMIRHSRDKKNEPNPQRFD 230

Query: 117 KLYSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLG 154
           ++    +    DGL SL Y V++ +++ L+T   V +G
Sbjct: 231 RIAHTKETMLSDGLNSLTYMVLEVQRYPLYTKITVDIG 268
>d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos taurus) [TaxId: 9913]} Length = 271 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query155
d1pzta_271 beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos 100.0
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 97.93
d1pzta_271 beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos 97.76
>d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: beta 1,4 galactosyltransferase (b4GalT1)
domain: beta 1,4 galactosyltransferase (b4GalT1)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=6.9e-37  Score=249.25  Aligned_cols=130  Identities=31%  Similarity=0.513  Sum_probs=122.1

Q ss_pred             cccccccccccceeeEeeeccCcceeEEeeehhcccccCCCCCcccCCCCChhHHHHHHhcCceEEecCCCceeEeeeec
Q psy13781         26 GHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRH  105 (155)
Q Consensus        26 ~~~r~~~DGLnsl~Yk~~~~~~~gl~t~i~~~~f~~vNGf~n~~~GwG~EDddl~~Rl~~~g~~i~r~~~~~~~y~~i~H  105 (155)
                      .++++...+++.+.|++.+....|++++|++++|.+||||||.|||||+|||||..|+..+|++|.|++..+++|+|+.|
T Consensus       137 ~~p~h~~~~~~~~~~~~~y~~~~GGv~~~~k~~f~kINGfsN~ywGWGgEDddl~~R~~~~g~~i~R~~~~~~~y~~l~H  216 (271)
T d1pzta_         137 SQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLSINGFPNNYWGAGGEDDDIYNRLAFRGMSVSRPNAVIGKTRMIRH  216 (271)
T ss_dssp             SSCEECCCEEGGGTTSCSCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCCTTTTEEEECCC
T ss_pred             ccCcceeeeccccccccccccccceeeeecHHHHhhcCCCCccccCCccccHHHHHHHHHcCCeEEccCCCccccceeec
Confidence            45778889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             C---CCCCChhhHHHHhhcCeeeccCCCceeeEEEeEEEeeccEEEEEEEecC
Q psy13781        106 R---KEKANPQRYEKLYSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGE  155 (155)
Q Consensus       106 ~---~~~~n~~r~~~l~~~~~~~~~dGL~sl~Y~~~~~~~~~lyt~i~vdi~~  155 (155)
                      .   .++.|+.|++++..++.+|..||||||.|++++++++||||+|+|||++
T Consensus       217 ~~d~~~~~n~~r~~~l~~~~~~~~~dGLnsl~Y~v~~~~~~~lyt~i~Vdi~~  269 (271)
T d1pzta_         217 SRDKKNEPNPQRFDRIAHTKETMLSDGLNSLTYMVLEVQRYPLYTKITVDIGT  269 (271)
T ss_dssp             SSCCCCCCCCCCCCCHHHHHHHTTTSSGGGCCCEEEEEEECSSCEEEEEECCS
T ss_pred             cCCcccccchHHHHHHHHHhhcccCCCCcceEEEEeEEEecCCeEEEEEEccC
Confidence            4   3456788999999999999999999999999999999999999999985
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure