Psyllid ID: psy13811

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------
Protein Sequence
MDRTDRYWVVMDRTVMDGMDEMRVVERRTVLDSMPDAWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATTSIAVVEGIILVCTIRPGVGHASMKGAQAGNYSKTSLTTDTLMDLSRVLFYILCVTELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTASR
Secondary Structure (PSIPRED)
ccccccHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccEEEEEEcccccccccccEEEEHHHHHHcccccccHHHHHEccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHEcccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHccEEcccccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MDRTDRYWVVMDRTVMDGMDEMRVVERRtvldsmpdawsERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSldlslskrvgfrSIAYYCATTSIAVVEGIILVCTirpgvghasmkgaqagnysktslttdtLMDLSRVLFYILCVTELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTASR
Flexible Loop (DISEMBL)
mdrtdrywvvmdrtvmdgmdemrvverrtvldsmpdawseRERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATTSIAVVEGIILVCTIRPGVGhasmkgaqagnysKTSLTTDTLMDLSRVLFYILCVTELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTASR
Low Complexity Region (SEG)
MDRTDRYWVVMDRTVMDGMDEMRVVERRTVLDSMPDAWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATTSIAVVEGIILVCTIRPGVGHASMKGAQAGNYSKtslttdtlmdlsRVLFYILCVTELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVllgllihgfillPAMYTFFVREWPFRFTANMGQAIATAFGTASR
Disordered region (IsUnstruct)
*****RYWVVMDRTVMDGMDEMRVVERRTVLDSMPDAWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATTSIAVVEGIILVCTIRPGVGHASMKGAQAGNYSKTSLTTDTLMDLSRVLFYILCVTELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAF*****
Disordered Region (DISOPRED)
*****RY*VVMDRTVMDGMDEMRVVERRTVLDSMPDAWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATTSIAVVEGIILVCTIRPGVGH********************LMDLSRVLFYILCVTELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTAS*
Disordered Region (DISEMBL)
MDRTDRYWVVMDRTVMDGMDEMRVVERRTVLDSMPDAWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATTSIAVVEGIILVCTIRPGVGHASMKGAQAGNYSKTSLTTDTLMDLSRVLFYILCVTELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTASR
Disordered Region (DISPRO)
***TDRYWVVMDRTVMDGMDEMRVVERRTVLDSMPDAWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATTSIAVVEGIILVCTIRPGV****************SLTTDTLMDLSRVLFYILCVTELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGT***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDRTDRYWVVMDRTVMDGMDEMRVVERRTVLDSMPDAWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATTSIAVVEGIILVCTIRPGVGHASMKGAQAGNYSKTSLTTDTLMDLSRVLFYILCVTELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTASR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	297	2.2.26 [Sep-21-2011]
Q22682	499	Putative sodium-dependent	yes	N/A	0.875	0.521	0.371	2e-43
P51906	523	Excitatory amino acid tra	yes	N/A	0.861	0.489	0.349	1e-40
P51907	523	Excitatory amino acid tra	yes	N/A	0.861	0.489	0.342	2e-40
P43006	572	Excitatory amino acid tra	no	N/A	0.845	0.438	0.373	5e-40
Q95135	524	Excitatory amino acid tra	no	N/A	0.861	0.488	0.341	5e-40
P31596	573	Excitatory amino acid tra	no	N/A	0.845	0.438	0.373	6e-40
Q10901	503	Excitatory amino acid tra	no	N/A	0.861	0.508	0.355	2e-39
P31597	524	Excitatory amino acid tra	no	N/A	0.861	0.488	0.337	2e-39
A2VDL4	530	Neutral amino acid transp	no	N/A	0.848	0.475	0.354	4e-39
P43007	532	Neutral amino acid transp	yes	N/A	0.875	0.488	0.354	2e-38

>sp|Q22682|EAA4_CAEEL Putative sodium-dependent excitatory amino acid transporter glt-4 OS=Caenorhabditis elegans GN=glt-4 PE=3 SV=3

 Score =  176 bits (445), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/288 (37%), Positives = 161/288 (55%), Gaps = 28/288 (9%)

Query: 37  AWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATT 96
           AWS+R   Y++FPG+LF++MLK LI+P+++SSI++++ SLD   + R+G  S+ YY  TT
Sbjct: 34  AWSKRHLSYLRFPGDLFVQMLKMLILPMIMSSIITSLASLDSGTAGRLGMVSMIYYTLTT 93

Query: 97  SIAVVEGIILVCTIRPGVGHASMKGAQAGNYSKT---SLTTDTLMDLSRVLF-------- 145
             AV  GI+LV  I+PG    +      G+   T   +   DT++DL +  F        
Sbjct: 94  FFAVFLGIVLVSVIKPGKWTTTNIEDLVGHVKTTPCVATAVDTIIDLMKSCFPENLIEAT 153

Query: 146 ---YILCV------TELYFILCVTELWQMRGEWVV--------GSNVLGLVFFSIAMGIA 188
                +C+      TE+   + +T   + R ++          G N+LGLV FS+A+GI 
Sbjct: 154 FRSQKICLKFFNGTTEIPPEIAMTMSPEQRAQFTEVPEKIVSDGMNILGLVVFSVALGIV 213

Query: 189 IARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGL 248
           I  IG+ GKP+ + F+SL    M +  WVI  SP GI FL+A +I+ MK     + +L  
Sbjct: 214 IGVIGEDGKPMKNFFKSLEACSMKLIGWVIIYSPVGITFLIAAQIVGMKDPGQELHRLMG 273

Query: 249 YFITVLLGLLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
           Y ITV+LGLLIH F+++P +     R  P +F   M QA+ TA  T+S
Sbjct: 274 YVITVILGLLIHAFVVIPLLCVVLARRNPIKFVGGMAQALLTALATSS 321

Caenorhabditis elegans (taxid: 6239)

>sp|P51906|EAA3_MOUSE Excitatory amino acid transporter 3 OS=Mus musculus GN=Slc1a1 PE=1 SV=2

 Score =  166 bits (421), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/289 (34%), Positives = 159/289 (55%), Gaps = 33/289 (11%)

Query: 39  SERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATTSI 98
           S  ++ Y  FPGE+ ++MLK +I+PL+VSS+++ + +LD ++S ++G R++ YY +TT I
Sbjct: 45  SNLDKFYFAFPGEILMRMLKLVILPLIVSSMITGVAALDSNVSGKIGLRAVVYYFSTTVI 104

Query: 99  AVVEGIILVCTIRPGVGHASMKGAQAGNYSKTSLTTDTLMDLSRVLFYILCV-------- 150
           AV+ GI+LV +I+PGV        + G   + S T D ++DL R +F    V        
Sbjct: 105 AVILGIVLVVSIKPGVTQKVNDINRTGKTPEVS-TMDAMLDLIRNMFPENLVQACFQQYK 163

Query: 151 ----------------TELYFILCVTEL-------WQMRGEWVVGSNVLGLVFFSIAMGI 187
                           TE+     +T +       +++ G +  G NVLGL+ F +  G+
Sbjct: 164 TKREEVKPVGDPGGNATEVSVTTAMTTMSENKTKEYKIVGLYSDGINVLGLIIFCLVFGL 223

Query: 188 AIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLG 247
            I ++G+ G+ L+  F +LS+  M I   ++   P GI FL+A KII+++       +LG
Sbjct: 224 VIGKMGEKGQILVDFFNALSDATMKIVQIIMCYMPIGILFLIAGKIIEVEDW-EIFRKLG 282

Query: 248 LYFITVLLGLLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
           LY  TVL GL IH  I+LP +Y   VR+ PFRF   M QA+ TA   +S
Sbjct: 283 LYMATVLSGLAIHSLIVLPLLYFIVVRKNPFRFALGMAQALLTALMISS 331

Transports L-glutamate and also L- and D-aspartate. Essential for terminating the postsynaptic action of glutamate by rapidly removing released glutamate from the synaptic cleft. Acts as a symport by cotransporting sodium. Negatively regulated by ARL6IP5.

Mus musculus (taxid: 10090)

>sp|P51907|EAA3_RAT Excitatory amino acid transporter 3 OS=Rattus norvegicus GN=Slc1a1 PE=1 SV=1

 Score =  166 bits (420), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 160/289 (55%), Gaps = 33/289 (11%)

Query: 39  SERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATTSI 98
           S  ++ Y  FPGE+ ++MLK +I+PL++SS+++ + +LD ++S ++G R++ YY +TT I
Sbjct: 45  SNLDKFYFAFPGEILMRMLKLVILPLIISSMITGVAALDSNVSGKIGLRAVVYYFSTTVI 104

Query: 99  AVVEGIILVCTIRPGVGHASMKGAQAGNYSKTSLTTDTLMDLSRVLFYILCV-------- 150
           AV+ GI+LV +I+PGV     +  + G   + S T D ++DL R +F    V        
Sbjct: 105 AVILGIVLVVSIKPGVTQKVNEINRTGKTPEVS-TVDAMLDLIRNMFPENLVQACFQQYK 163

Query: 151 ----------------TELYFILCVTEL-------WQMRGEWVVGSNVLGLVFFSIAMGI 187
                           TE+     +T +       +++ G +  G NVLGL+ F +  G+
Sbjct: 164 TKREEVKPASDPGGNQTEVSVTTAMTTMSENKTKEYKIVGLYSDGINVLGLIIFCLVFGL 223

Query: 188 AIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLG 247
            I ++G+ G+ L+  F +LS+  M I   ++   P GI FL+A KII+++       +LG
Sbjct: 224 VIGKMGEKGQILVDFFNALSDATMKIVQIIMCYMPIGILFLIAGKIIEVEDW-EIFRKLG 282

Query: 248 LYFITVLLGLLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
           LY  TVL GL IH  ++LP +Y   VR+ PFRF   M QA+ TA   +S
Sbjct: 283 LYMATVLSGLAIHSLVVLPLIYFIVVRKNPFRFALGMAQALLTALMISS 331

Transports L-glutamate and also L- and D-aspartate. Essential for terminating the postsynaptic action of glutamate by rapidly removing released glutamate from the synaptic cleft. Acts as a symport by cotransporting sodium. Negatively regulated by ARL6IP5.

Rattus norvegicus (taxid: 10116)

>sp|P43006|EAA2_MOUSE Excitatory amino acid transporter 2 OS=Mus musculus GN=Slc1a2 PE=1 SV=1

 Score =  165 bits (417), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/289 (37%), Positives = 154/289 (53%), Gaps = 38/289 (13%)

Query: 44  MYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATTSIAVVEG 103
           M + FPG++ ++MLK LI+PL++SS+++ +  LD   S R+G R++ YY +TT IA V G
Sbjct: 76  MLIAFPGDILMRMLKMLILPLIISSLITGLSGLDAKASGRLGTRAMVYYMSTTIIAAVLG 135

Query: 104 IILVCTIRPGVGHASMK-GAQAGNYSKTSLTTDTLMDLSRVLF----------YILCVTE 152
           +ILV  I PG      + G    N   +SL  D  +DL R LF           I  VT+
Sbjct: 136 VILVLAIHPGNPKLKKQLGPGKKNDEVSSL--DAFLDLIRNLFPENLVQACFQQIQTVTK 193

Query: 153 LYFILCVTELWQM------------------------RG-EWVVGSNVLGLVFFSIAMGI 187
              +   +E                            +G E+  G NVLGL+ F IA GI
Sbjct: 194 KVLVAPPSEEANTTKAVISMLNETMNEAPEETKIVIKKGLEFKDGMNVLGLIGFFIAFGI 253

Query: 188 AIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLG 247
           A+ ++G+  K ++  F  L+E+VM +   ++W SP GI  L+  KII +K L     QLG
Sbjct: 254 AMGKMGEQAKLMVEFFNILNEIVMKLVIMIMWYSPLGIACLICGKIIAIKDLEVVARQLG 313

Query: 248 LYFITVLLGLLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
           +Y ITV++GL+IHG I LP +Y    R+ PF F A + QA  TA GTAS
Sbjct: 314 MYMITVIVGLIIHGGIFLPLIYFVVTRKNPFSFFAGIFQAWITALGTAS 362

Transports L-glutamate and also L- and D-aspartate. Essential for terminating the postsynaptic action of glutamate by rapidly removing released glutamate from the synaptic cleft. Acts as a symport by cotransporting sodium.

Mus musculus (taxid: 10090)

>sp|Q95135|EAA3_BOVIN Excitatory amino acid transporter 3 OS=Bos taurus GN=SLC1A1 PE=2 SV=1

 Score =  164 bits (416), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/290 (34%), Positives = 156/290 (53%), Gaps = 34/290 (11%)

Query: 39  SERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATTSI 98
           S  E+ Y  FPGE+ ++MLK +I+PL+VSS+++ + +LD ++S ++G R++ YY  TT I
Sbjct: 45  SNLEKFYFSFPGEILMRMLKLVILPLIVSSMITGVATLDSNVSGKIGLRAVVYYFCTTLI 104

Query: 99  AVVEGIILVCTIRPGVGHASMKGAQAGNYSKTSLTTDTLMDLSRVLF------------- 145
           AV+ GI+LV +I+PGV     +  + GN  + S T D ++DL R +F             
Sbjct: 105 AVILGIVLVVSIKPGVTQKVNEIDRTGNTPEVS-TVDAMLDLIRNMFPENLVQACFQQYK 163

Query: 146 -------------------YILCVTELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMG 186
                               +  +         T+ +++ G +  G NVLGL+ F + +G
Sbjct: 164 TTREEVELSEEPGTNSTEATVTAIMTTAISKNKTKEYKVVGMYSDGINVLGLIVFCLVLG 223

Query: 187 IAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQL 246
           I I R  + G+ L+  F +LS+  M I   ++   P GI FL+A KII+++       +L
Sbjct: 224 IVIGRKWEKGQILVDFFNALSDATMKIVQIIMCYMPIGILFLIAGKIIEVEDW-EIFRKL 282

Query: 247 GLYFITVLLGLLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
           GLY  TVL GL IH  ++LP +Y   VR+ PF+F   M QA+ TA   +S
Sbjct: 283 GLYMATVLSGLAIHSIVILPLIYFIIVRKNPFQFAMGMAQALLTALMISS 332

Transports L-glutamate and also L- and D-aspartate. Essential for terminating the postsynaptic action of glutamate by rapidly removing released glutamate from the synaptic cleft. Acts as a symport by cotransporting sodium. Negatively regulated by ARL6IP5.

Bos taurus (taxid: 9913)

>sp|P31596|EAA2_RAT Excitatory amino acid transporter 2 OS=Rattus norvegicus GN=Slc1a2 PE=1 SV=2

 Score =  164 bits (415), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/289 (37%), Positives = 154/289 (53%), Gaps = 38/289 (13%)

Query: 44  MYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATTSIAVVEG 103
           M + FPG++ ++MLK LI+PL++SS+++ +  LD   S R+G R++ YY +TT IA V G
Sbjct: 76  MLIAFPGDILMRMLKMLILPLIISSLITGLSGLDAKASGRLGTRAMVYYMSTTIIAAVLG 135

Query: 104 IILVCTIRPGVGHASMK-GAQAGNYSKTSLTTDTLMDLSRVLF----------YILCVTE 152
           +ILV  I PG      + G    N   +SL  D  +DL R LF           I  VT+
Sbjct: 136 VILVLAIHPGNPKLKKQLGPGKKNDEVSSL--DAFLDLIRNLFPENLVQACFQQIQTVTK 193

Query: 153 LYFILCVTELWQM------------------------RG-EWVVGSNVLGLVFFSIAMGI 187
              +   +E                            +G E+  G NVLGL+ F IA GI
Sbjct: 194 KVLVAPPSEEANTTKAVISLLNETMNEAPEETKIVIKKGLEFKDGMNVLGLIGFFIAFGI 253

Query: 188 AIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLG 247
           A+ ++G+  K ++  F  L+E+VM +   ++W SP GI  L+  KII +K L     QLG
Sbjct: 254 AMGKMGEQAKLMVEFFNILNEIVMKLVIMIMWYSPLGIACLICGKIIAIKDLEVVARQLG 313

Query: 248 LYFITVLLGLLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
           +Y ITV++GL+IHG I LP +Y    R+ PF F A + QA  TA GTAS
Sbjct: 314 MYMITVIVGLIIHGGIFLPLIYFVVTRKNPFSFFAGIFQAWITALGTAS 362

Transports L-glutamate and also L- and D-aspartate. Essential for terminating the postsynaptic action of glutamate by rapidly removing released glutamate from the synaptic cleft. Acts as a symport by cotransporting sodium.

Rattus norvegicus (taxid: 10116)

>sp|Q10901|EAA1_CAEEL Excitatory amino acid transporter OS=Caenorhabditis elegans GN=glt-1 PE=1 SV=2

 Score =  163 bits (412), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/284 (35%), Positives = 153/284 (53%), Gaps = 28/284 (9%)

Query: 39  SERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATTSI 98
           S +  MY+ FPGEL + MLK +I+PL++SS++S +  LD   S ++G  ++ YY  TT++
Sbjct: 45  SPQNIMYISFPGELLMHMLKMMILPLIMSSLISGLAQLDARQSGKLGSLAVTYYMFTTAV 104

Query: 99  AVVEGIILVCTIRPGVGHASMKGAQAGNYSKTSLTTDTLMDLSRVLFYILCVTELYFILC 158
           AVV GI LV  I PG      K    G   KT  T DTL+DL R +F    V +  F   
Sbjct: 105 AVVTGIFLVLVIHPG-DPTIKKEIGTGTEGKTVSTVDTLLDLLRNMFP-ENVVQATFQQV 162

Query: 159 VTELWQMRG--------------------------EWVVGSNVLGLVFFSIAMGIAIARI 192
            T+  ++R                           E+  G NVLG++ F IA+GI+++++
Sbjct: 163 QTKYIKVRPKVVKNNDSATLAALNNGSLDYVKASVEYTSGMNVLGVIVFCIAIGISLSQL 222

Query: 193 GKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFIT 252
           G+    ++  F  + +V+M +   V+W SPFGIF L+  KI+++  L+ T   L +Y +T
Sbjct: 223 GQEAHVMVQFFVIMDKVIMKLVMTVMWYSPFGIFCLIMGKILEIHDLADTARMLAMYMVT 282

Query: 253 VLLGLLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
           VL GL IH  I LP ++    ++ P+ F   + QA  TA GTAS
Sbjct: 283 VLSGLAIHSLISLPLIFFVTTKKNPYVFMRGLFQAWITALGTAS 326

Transports L-glutamate and also L- and D-aspartate. Essential for terminating the postsynaptic action of glutamate by rapidly removing released glutamate from the synaptic cleft. Acts as a symport by cotransporting sodium.

Caenorhabditis elegans (taxid: 6239)

>sp|P31597|EAA3_RABIT Excitatory amino acid transporter 3 OS=Oryctolagus cuniculus GN=SLC1A1 PE=2 SV=1

 Score =  162 bits (411), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 158/290 (54%), Gaps = 34/290 (11%)

Query: 39  SERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATTSI 98
           S  ++ Y  FPGE+ ++MLK +I+PL+VSS+++ + +LD ++S ++G R++ YY  TT I
Sbjct: 45  STLDKFYFAFPGEILMRMLKLVILPLIVSSMITGVAALDSNVSGKIGLRAVLYYFCTTII 104

Query: 99  AVVEGIILVCTIRPGVGHASMKGAQAGNYSKTSLTTDTLMDLSRVLF------------- 145
           AV+ GI+LV +I+PGV     +  + G+  + S T D ++DL R +F             
Sbjct: 105 AVILGIVLVVSIKPGVTQKVDEIDRTGSTPEVS-TVDAMLDLIRNMFPENLVQACFQQYK 163

Query: 146 -------------------YILCVTELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMG 186
                               +  V         T+ +++ G +  G NVLGL+ F +  G
Sbjct: 164 TTREEVTASDDTGKNGTEESVTAVMTTAVSENRTKEYRVVGLYSDGINVLGLIVFCLVFG 223

Query: 187 IAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQL 246
           + I ++G+ G+ L+  F +LS+  M I   ++   P GI FL+A KII+++       +L
Sbjct: 224 LVIGKMGEKGQILVDFFNALSDATMKIVQIIMCYMPLGILFLIAGKIIEVEDW-EIFRKL 282

Query: 247 GLYFITVLLGLLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
           GLY +TVL GL IH  ++LP +Y   VR+ PFRF   M QA+ TA   +S
Sbjct: 283 GLYMVTVLSGLAIHSIVILPLIYFIVVRKNPFRFAMGMTQALLTALMISS 332

Transports L-glutamate and also L- and D-aspartate. Essential for terminating the postsynaptic action of glutamate by rapidly removing released glutamate from the synaptic cleft. Acts as a symport by cotransporting sodium. Negatively regulated by ARL6IP5.

Oryctolagus cuniculus (taxid: 9986)

>sp|A2VDL4|SATT_BOVIN Neutral amino acid transporter A OS=Bos taurus GN=SLC1A4 PE=2 SV=1

 Score =  162 bits (409), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/271 (35%), Positives = 147/271 (54%), Gaps = 19/271 (7%)

Query: 45  YVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATTSIAVVEGI 104
           Y+ FPGE+ L+ML+ +I+PL+V S+VS   SLD S   R+G  +IAY+  TT  A    +
Sbjct: 74  YLAFPGEMLLRMLRMIILPLVVCSLVSGAASLDASSLGRLGGIAIAYFGLTTLGASALAV 133

Query: 105 ILVCTIRPGVGHASMKGAQ-----AGNYSKTSLTTDTLMDLSRVLF-----------YIL 148
            L   I+PG G  +++ +      +G       T D+ +DL+R LF           Y  
Sbjct: 134 ALAFIIKPGSGSQTLQSSDLGLEDSGPPPVPKETVDSFLDLTRNLFPSNLVVAAFRTYAT 193

Query: 149 CVTELYFILCVTELWQMR---GEWVVGSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFES 205
              E+ +     ++   +   G  + G N+LGLV F++ +G+A+ ++G  G+ L+  F +
Sbjct: 194 DYREVTYNTSAGKVTIEKIPIGTEIEGMNILGLVLFALVLGVALKKLGSEGEELIRFFNA 253

Query: 206 LSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILL 265
            +E  M + +W++W  P GI FLV  KI++MK +   V  LG Y  T +LG  IHG I+L
Sbjct: 254 FNEATMVLVSWIMWYVPVGIMFLVGSKIVEMKDIIMLVTSLGKYIFTSILGHFIHGGIVL 313

Query: 266 PAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
           P +Y  F R+ PFRF   +    ATAF T S
Sbjct: 314 PLIYFVFTRKNPFRFLLGLLTPFATAFATCS 344

Transporter for alanine, serine, cysteine, and threonine. Exhibits sodium dependence.

Bos taurus (taxid: 9913)

>sp|P43007|SATT_HUMAN Neutral amino acid transporter A OS=Homo sapiens GN=SLC1A4 PE=1 SV=1

 Score =  159 bits (403), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/279 (35%), Positives = 149/279 (53%), Gaps = 19/279 (6%)

Query: 37  AWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATT 96
           + S  +  Y+ FPGE+ L+ML+ +I+PL+V S+VS   SLD S   R+G  ++AY+  TT
Sbjct: 66  SLSRTQVTYLAFPGEMLLRMLRMIILPLVVCSLVSGAASLDASCLGRLGGIAVAYFGLTT 125

Query: 97  SIAVVEGIILVCTIRPGVGHASMKGA-----QAGNYSKTSLTTDTLMDLSRVLFY----- 146
             A    + L   I+PG G  +++ +      +G       T D+ +DL+R LF      
Sbjct: 126 LSASALAVALAFIIKPGSGAQTLQSSDLGLEDSGPPPVPKETVDSFLDLARNLFPSNLVV 185

Query: 147 ---------ILCVTELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAGK 197
                       VT+      VT      G  + G N+LGLV F++ +G+A+ ++G  G+
Sbjct: 186 AAFRTYATDYKVVTQNSSSGNVTHEKIPIGTEIEGMNILGLVLFALVLGVALKKLGSEGE 245

Query: 198 PLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGL 257
            L+  F SL+E  M + +W++W  P GI FLV  KI++MK +   V  LG Y    +LG 
Sbjct: 246 DLIRFFNSLNEATMVLVSWIMWYVPVGIMFLVGSKIVEMKDIIVLVTSLGKYIFASILGH 305

Query: 258 LIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
           +IHG I+LP +Y  F R+ PFRF   +    ATAF T S
Sbjct: 306 VIHGGIVLPLIYFVFTRKNPFRFLLGLLAPFATAFATCS 344

Transporter for alanine, serine, cysteine, and threonine. Exhibits sodium dependence.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	297
328716022	485	PREDICTED: excitatory amino acid transpo	0.898	0.550	0.519	2e-74
328716024	509	PREDICTED: excitatory amino acid transpo	0.898	0.524	0.519	2e-74
242022376	471	Excitatory amino acid transporter, putat	0.865	0.545	0.509	3e-69
170029848	482	excitatory amino acid transporter 3 [Cul	0.888	0.547	0.516	5e-69
157106357	481	glutamate transporter [Aedes aegypti] gi	0.888	0.548	0.507	7e-69
345486509	509	PREDICTED: excitatory amino acid transpo	0.892	0.520	0.483	8e-69
307196927	484	Excitatory amino acid transporter 3 [Har	0.861	0.528	0.496	1e-67
383848603	503	PREDICTED: excitatory amino acid transpo	0.882	0.520	0.492	2e-67
118777342	480	AGAP009443-PA [Anopheles gambiae str. PE	0.888	0.55	0.508	3e-67
383849445	472	PREDICTED: excitatory amino acid transpo	0.895	0.563	0.498	8e-67

>gi|328716022|ref|XP_003245813.1| PREDICTED: excitatory amino acid transporter 1-like isoform 2 [Acyrthosiphon pisum]

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 148/285 (51%), Positives = 193/285 (67%), Gaps = 18/285 (6%)

Query: 30  VLDSMPDAWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSI 89
           +L      W++RE  YVQFPG++FL+MLK LIVPLLVSSIVSAIGSLDLSLSK++GF+SI
Sbjct: 39  ILKGSKSEWTKREITYVQFPGDIFLRMLKMLIVPLLVSSIVSAIGSLDLSLSKKIGFQSI 98

Query: 90  AYYCATTSIAVVEGIILVCTIRPG-VGHASMKGAQAGNYSKTSLTTDTLMDLSRVLF--- 145
           AYY ATTS+AV++GI  V  I PG +     + A     ++   T DT++DL R +F   
Sbjct: 99  AYYAATTSMAVLQGIFWVMLIHPGKIMSQEEQTASVHQETRPITTVDTILDLIRNIFPAN 158

Query: 146 YILCVTELYFILCVTE--------------LWQMRGEWVVGSNVLGLVFFSIAMGIAIAR 191
            I      Y  + +                LW+++ E V GSNVLGLV FS+A GI I +
Sbjct: 159 LIEATISTYRSVLIPPKALPNSTVSVPDMTLWEIKSEMVEGSNVLGLVAFSVAFGICIGK 218

Query: 192 IGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFI 251
           +G  GKPLL+ F+SL E VM +T WVIW+SP G+ FLVA K++++      VG+LG+YF+
Sbjct: 219 LGPTGKPLLNFFDSLGEAVMLMTNWVIWLSPMGVLFLVASKVLELDDFGVIVGRLGMYFL 278

Query: 252 TVLLGLLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
           TV+LGL +HGF+LLP MY+ F R+ PF+FT NMGQAI TAFGTAS
Sbjct: 279 TVVLGLFVHGFVLLPLMYSLFTRQLPFQFTMNMGQAIITAFGTAS 323

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328716024|ref|XP_001944328.2| PREDICTED: excitatory amino acid transporter 1-like isoform 1 [Acyrthosiphon pisum]

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 148/285 (51%), Positives = 193/285 (67%), Gaps = 18/285 (6%)

Query: 30  VLDSMPDAWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSI 89
           +L      W++RE  YVQFPG++FL+MLK LIVPLLVSSIVSAIGSLDLSLSK++GF+SI
Sbjct: 63  ILKGSKSEWTKREITYVQFPGDIFLRMLKMLIVPLLVSSIVSAIGSLDLSLSKKIGFQSI 122

Query: 90  AYYCATTSIAVVEGIILVCTIRPG-VGHASMKGAQAGNYSKTSLTTDTLMDLSRVLF--- 145
           AYY ATTS+AV++GI  V  I PG +     + A     ++   T DT++DL R +F   
Sbjct: 123 AYYAATTSMAVLQGIFWVMLIHPGKIMSQEEQTASVHQETRPITTVDTILDLIRNIFPAN 182

Query: 146 YILCVTELYFILCVTE--------------LWQMRGEWVVGSNVLGLVFFSIAMGIAIAR 191
            I      Y  + +                LW+++ E V GSNVLGLV FS+A GI I +
Sbjct: 183 LIEATISTYRSVLIPPKALPNSTVSVPDMTLWEIKSEMVEGSNVLGLVAFSVAFGICIGK 242

Query: 192 IGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFI 251
           +G  GKPLL+ F+SL E VM +T WVIW+SP G+ FLVA K++++      VG+LG+YF+
Sbjct: 243 LGPTGKPLLNFFDSLGEAVMLMTNWVIWLSPMGVLFLVASKVLELDDFGVIVGRLGMYFL 302

Query: 252 TVLLGLLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
           TV+LGL +HGF+LLP MY+ F R+ PF+FT NMGQAI TAFGTAS
Sbjct: 303 TVVLGLFVHGFVLLPLMYSLFTRQLPFQFTMNMGQAIITAFGTAS 347

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242022376|ref|XP_002431616.1| Excitatory amino acid transporter, putative [Pediculus humanus corporis] gi|212516924|gb|EEB18878.1| Excitatory amino acid transporter, putative [Pediculus humanus corporis]

 Score =  267 bits (683), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 139/273 (50%), Positives = 189/273 (69%), Gaps = 16/273 (5%)

Query: 38  WSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATTS 97
           W  RE MYVQ+ G+LFL+MLK LI+PL+V+S+VSAIGSLDLSLS R+G R++ +Y  TT 
Sbjct: 36  WPAREIMYVQYIGDLFLRMLKSLILPLIVASLVSAIGSLDLSLSGRIGGRAVFFYMTTTM 95

Query: 98  IAVVEGIILVCTIRPGVGHASMKGAQAGNYSKTSLTTDTLMDLSRVLF----YILCVTEL 153
           IAVVEGIILV  I PG G +S    +AG+ S+   T DTLMDL R +F       C+++ 
Sbjct: 96  IAVVEGIILVIAIHPGQGDSSSI-VRAGS-SRNVTTADTLMDLVRNMFPPNLVQACISQY 153

Query: 154 YFILCVTEL----------WQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAGKPLLSVF 203
             +L    L          W++  E+  G+N+LGLV FS  +GI + ++GK G PLL+ F
Sbjct: 154 RTVLKPQTLPNGTLAPIMEWEISHEYADGTNILGLVVFSTVLGITLGKMGKEGSPLLNFF 213

Query: 204 ESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFI 263
             L   +M IT WVIW+SP G+FFLV+ KI++M+S    +GQLG+YF+TVL+GLL+HGF+
Sbjct: 214 SCLGHCMMIITGWVIWVSPIGVFFLVSSKILEMESFEVIIGQLGMYFMTVLVGLLVHGFV 273

Query: 264 LLPAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
           +LP +++   R  PFR+  NMG+A+ATAFGTAS
Sbjct: 274 ILPTIFSIVTRTLPFRYIGNMGEALATAFGTAS 306

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170029848|ref|XP_001842803.1| excitatory amino acid transporter 3 [Culex quinquefasciatus] gi|167864785|gb|EDS28168.1| excitatory amino acid transporter 3 [Culex quinquefasciatus]

 Score =  267 bits (682), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 145/281 (51%), Positives = 189/281 (67%), Gaps = 17/281 (6%)

Query: 30  VLDSMPDAWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSI 89
           +L +  D W++RE MY+Q+PG+LFL+MLKCLIVPLLVSSI SAIGSLDLS+SK++ FR+I
Sbjct: 42  MLKNSSDPWTQREVMYIQYPGDLFLRMLKCLIVPLLVSSITSAIGSLDLSMSKKIAFRAI 101

Query: 90  AYYCATTSIAVVEGIILVCTIRPGVGH--ASMKGAQAGNYSKTSLTTDTLMDLSRVLFYI 147
            YY  TT  AVV GIILV TIRPG G    SMKG      ++  LT DTL+DL R LF  
Sbjct: 102 IYYFTTTICAVVLGIILVSTIRPGSGKEMGSMKGKAT---TRVVLTADTLLDLIRNLFPP 158

Query: 148 LCVTELYF----ILCVTE--------LWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKA 195
             V    F    IL   E         +++  E+  G+NVLGLV FSI +G  I ++ +A
Sbjct: 159 NIVQATMFQYRTILVAPENTTDVPLTSYKITNEFTEGTNVLGLVMFSIVLGACIGKMREA 218

Query: 196 GKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLL 255
           GKPL  +FE+LSE +M IT+WVIWISP G+FFLVA K+++M S    +GQLG YF+TV++
Sbjct: 219 GKPLQRLFETLSEAMMIITSWVIWISPIGVFFLVAAKLLEMASFMEVLGQLGWYFVTVMI 278

Query: 256 GLLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
           GL++HGF  +  ++    R+  F + A M Q +ATAFGT S
Sbjct: 279 GLILHGFGTISVIFFLTTRKLSFPYIAKMSQVLATAFGTGS 319

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157106357|ref|XP_001649287.1| glutamate transporter [Aedes aegypti] gi|108879888|gb|EAT44113.1| AAEL004496-PA [Aedes aegypti]

 Score =  266 bits (680), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 142/280 (50%), Positives = 190/280 (67%), Gaps = 16/280 (5%)

Query: 30  VLDSMPDAWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSI 89
           +L +  + W++RE MY+Q+PG+LFL+MLKCLIVPLLVSSI SAIGSLDLS+SK++ FR+I
Sbjct: 42  MLKNSSEPWTQREVMYIQYPGDLFLRMLKCLIVPLLVSSITSAIGSLDLSMSKKIAFRAI 101

Query: 90  AYYCATTSIAVVEGIILVCTIRPGVGH--ASMKGAQAGNYSKTSLTTDTLMDLSRVLFYI 147
            YY  TT  AVV GIILV TIRPG G    SMKG  A   ++  LT DTL+DL R LF  
Sbjct: 102 VYYFTTTICAVVLGIILVSTIRPGSGPNVGSMKGKAA---TRQVLTADTLLDLIRNLFPP 158

Query: 148 LCVTELYFILCVT-----------ELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAG 196
             +    F    T           + +++  E+  G+NVLGLV FS+ +G  I ++ +AG
Sbjct: 159 NIIQATMFQKLSTLTNNISPPVPLQKYRITSEFTEGTNVLGLVMFSVVLGACIGKMREAG 218

Query: 197 KPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLG 256
           KPL  +FE+LSE +M IT+WVIWISP G+FFLVA K+++M S +  +GQLG YF+TV+LG
Sbjct: 219 KPLQGLFETLSEAMMIITSWVIWISPIGVFFLVAAKLLEMASFTEVLGQLGWYFMTVMLG 278

Query: 257 LLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
           L++HGF  +  ++    R+  F + A M Q +ATAFGT S
Sbjct: 279 LVLHGFGTISVIFFMTTRKLAFPYIAQMSQVLATAFGTGS 318

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345486509|ref|XP_003425489.1| PREDICTED: excitatory amino acid transporter 1-like [Nasonia vitripennis]

 Score =  266 bits (680), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 135/279 (48%), Positives = 190/279 (68%), Gaps = 14/279 (5%)

Query: 30  VLDSMPDAWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSI 89
           +L +  D W++RE MY+ + GELFL+MLK LI+PL+++S++SAIGSLDLSLS ++G R+I
Sbjct: 67  ILRNARDNWTKREIMYINYVGELFLRMLKSLILPLIMASLISAIGSLDLSLSSKIGGRAI 126

Query: 90  AYYCATTSIAVVEGIILVCTIRPGVGHASMKGAQAGNYSKTSLTTDTLMDLSRVLF---- 145
           +YY  TT  AV+ GIILV  I+PG    S     A   ++  LT+DTLMDL R +F    
Sbjct: 127 SYYMLTTVSAVILGIILVNLIQPGRNQHSTDTKNA--TTRNVLTSDTLMDLVRNMFPPNL 184

Query: 146 --YILCVTELYFILCVTELWQMRGEWVV------GSNVLGLVFFSIAMGIAIARIGKAGK 197
               +   +   I  V +    + EW +      G+N+LGLV FS  +GI + ++G  GK
Sbjct: 185 VEACIAQHQTKIIQGVNDTTDNKHEWEIKFGTEPGTNILGLVVFSTVLGITLGKMGDNGK 244

Query: 198 PLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGL 257
           PLL+ FE+LS  +M IT WV+W+SP G+ FLVA KI++M++LS  V QLG+YF+TV++GL
Sbjct: 245 PLLNFFETLSTAMMIITNWVVWLSPLGVMFLVASKIVEMETLSTVVSQLGMYFLTVIVGL 304

Query: 258 LIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
            IHGFI+LP++Y  F R  PF + +NM QA+ATAFGT+S
Sbjct: 305 CIHGFIILPSIYFLFTRRNPFTYVSNMAQAMATAFGTSS 343

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307196927|gb|EFN78314.1| Excitatory amino acid transporter 3 [Harpegnathos saltator]

 Score =  262 bits (670), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 140/282 (49%), Positives = 186/282 (65%), Gaps = 26/282 (9%)

Query: 32  DSMPDAWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAY 91
           +S  + W+ RE MY+ + G+LFL+MLK LI+PL++SS+VSAIGSLDLSLS ++G R+I Y
Sbjct: 52  NSRTEKWTPREIMYINYLGDLFLRMLKSLILPLIISSLVSAIGSLDLSLSGKIGARAIGY 111

Query: 92  YCATTSIAVVEGIILVCTIRPGVGH-ASMKGAQAGNYSKTSLTTDTLMDLSRVLFYILCV 150
           Y  TT  AVV GIILV +I+PGVG  AS     A N S    T DTLMDL R +F    V
Sbjct: 112 YMVTTICAVVLGIILVVSIQPGVGSSASESKRPAQNVS----TVDTLMDLVRNMFPPNLV 167

Query: 151 TELYFILCVT----------------ELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGK 194
                  C++                E W++  + V G+N+LGLV F+  +GI + ++G 
Sbjct: 168 QA-----CISQHRTEPKPPENESIPLEEWELVEKEVSGANILGLVVFATVLGITLGKMGP 222

Query: 195 AGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVL 254
             KPLLS FESLS  +M IT WVIW+SP G+ FLVA KI +MKSL   V QLG+YF+TVL
Sbjct: 223 QAKPLLSFFESLSGAMMVITNWVIWLSPIGVLFLVASKITEMKSLDEIVAQLGMYFLTVL 282

Query: 255 LGLLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
           + L+IHGF++LP MY    ++ P+R+ +NM QA+ TAFGT+S
Sbjct: 283 VALIIHGFLVLPGMYFLLTKKNPYRYISNMAQALVTAFGTSS 324

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383848603|ref|XP_003699938.1| PREDICTED: excitatory amino acid transporter 1-like [Megachile rotundata]

 Score =  261 bits (668), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 136/276 (49%), Positives = 189/276 (68%), Gaps = 14/276 (5%)

Query: 33  SMPDAWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYY 92
           S P  W++RE MY+ + G+LFL+MLK LI+PL++SS+VSAIGSLDLSLS R+G R+I YY
Sbjct: 71  SRPQGWTKREIMYINYLGDLFLRMLKSLILPLIISSLVSAIGSLDLSLSGRIGARAIVYY 130

Query: 93  CATTSIAVVEGIILVCTIRPGVGHASMKGAQAGNYSKTSLTTDTLMDLSRVLFYI----L 148
             TT  AV+ GIILV TI+PGVG+      +   +S+   T DTLMDL R +F       
Sbjct: 131 MVTTISAVILGIILVITIQPGVGNN--PDIKTKEHSQNVSTVDTLMDLVRNMFPPNLVEA 188

Query: 149 CV----TELYFILCVT----ELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAGKPLL 200
           C+    TE+   +  +    + W++  + V G+N++GLV F+ A+GI + ++ + GKPLL
Sbjct: 189 CISQHRTEMQKPVNGSTDNMDNWELVQKSVSGTNIMGLVVFATALGITLGKMEQQGKPLL 248

Query: 201 SVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIH 260
             FESLS  +M IT WVIW+SP G+FFLV  KI +M+SL   V QLG+YF+TVL+GL IH
Sbjct: 249 HFFESLSSAMMLITHWVIWLSPIGVFFLVGAKITEMQSLDEVVAQLGMYFLTVLIGLCIH 308

Query: 261 GFILLPAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
           GFI+LP +Y    ++ P+ + +NM QA+ TAFGT+S
Sbjct: 309 GFIVLPILYFVLTKKNPYVYISNMAQALVTAFGTSS 344

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|118777342|ref|XP_560420.2| AGAP009443-PA [Anopheles gambiae str. PEST] gi|116132905|gb|EAL42048.2| AGAP009443-PA [Anopheles gambiae str. PEST]

 Score =  261 bits (666), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 189/279 (67%), Gaps = 15/279 (5%)

Query: 31  LDSMPDAWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIA 90
           L +  + W++RE MY+Q+PG+LFL+MLKCLIVPLLVSSI SAIGSLDLS+SK++ FR+I 
Sbjct: 43  LKNSAEPWTQREVMYIQYPGDLFLRMLKCLIVPLLVSSITSAIGSLDLSMSKKIAFRAII 102

Query: 91  YYCATTSIAVVEGIILVCTIRPGVG-HASMKGAQAGNYSKTSLTTDTLMDLSRVLF--YI 147
           YY  TT  AV+ GIILV TIRPG G   S  G +A   ++  LT DTL+DL R LF   I
Sbjct: 103 YYFTTTVCAVILGIILVSTIRPGAGREVSNLGGKA--TTRQVLTADTLLDLVRNLFPPNI 160

Query: 148 LCVTELYFILCVT----EL------WQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAGK 197
           +  T      CV     EL      +++  E+  G+NVLGLV FS+ +G  I ++ + GK
Sbjct: 161 IQATMFQVQDCVALYTFELMIPLTQYKITSEFTEGTNVLGLVMFSVVLGTCIGKMREKGK 220

Query: 198 PLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGL 257
           PLL +FE+LSE +M IT+WVIWISP G+ FLVA K+++M S    +GQLG YF+TV+LGL
Sbjct: 221 PLLGLFETLSEAMMIITSWVIWISPIGVLFLVAAKLLEMASFVEVLGQLGWYFMTVMLGL 280

Query: 258 LIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
           ++HGF  +  ++    R+  F + A M Q +ATAFGT S
Sbjct: 281 MLHGFGTISVIFFLTTRKIAFPYIAKMSQVLATAFGTGS 319

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383849445|ref|XP_003700355.1| PREDICTED: excitatory amino acid transporter 4-like [Megachile rotundata]

 Score =  259 bits (663), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 141/283 (49%), Positives = 184/283 (65%), Gaps = 17/283 (6%)

Query: 28  RTVLDSMPDAWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFR 87
           R V D   + WS+RE MY+QFPG++FL+MLK LI+PL+V+SI+SAIG LDLSLS R+G R
Sbjct: 35  RNVRD---EPWSKREIMYIQFPGDIFLRMLKALILPLIVASIISAIGGLDLSLSGRIGMR 91

Query: 88  SIAYYCATTSIAVVEGIILVCTIRPG-VGHASMKGAQAGNYSKTSLTTDTLMDLSRVLF- 145
           SI YY ATT  AV  GIILV  I+PG     S+   Q     +   TTDTL+DL R +F 
Sbjct: 92  SIYYYSATTISAVTLGIILVLIIKPGNFSSQSLVALQDAKTPRDVTTTDTLLDLVRNVFP 151

Query: 146 ---YILCVTELYFILCVTEL---------WQMRGEWVVGSNVLGLVFFSIAMGIAIARIG 193
                 C+ +   I+   E          W++  ++  G+N LGLVFF I  GIAI+++G
Sbjct: 152 PNLVQACIAQYRTIIIRPENVTNGSNIYDWEITHQYGDGTNTLGLVFFGIVFGIAISKMG 211

Query: 194 KAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITV 253
           + GKPLL  F++LSE  M IT WVIW+SP G+ FLV  K++++K +   VGQLGLYF+TV
Sbjct: 212 EPGKPLLIFFDTLSEATMLITKWVIWVSPIGVLFLVTAKLLEIKDIGAIVGQLGLYFVTV 271

Query: 254 LLGLLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
           LLGLLIHG   L  ++    RE PF+    MGQ +ATAFGT+S
Sbjct: 272 LLGLLIHGCGTLSIIFFICTRELPFKLIGKMGQVLATAFGTSS 314

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	297
FB|FBgn0026439	479	Eaat1 "Excitatory amino acid t	0.895	0.555	0.429	1.2e-51
ZFIN|ZDB-GENE-040718-414	528	slc1a1 "solute carrier family	0.461	0.259	0.369	4e-39
ZFIN|ZDB-GENE-030131-2159	537	slc1a3a "solute carrier family	0.427	0.236	0.409	1.2e-38
ZFIN|ZDB-GENE-071004-45	560	slc1a6 "solute carrier family	0.420	0.223	0.376	3.6e-38
UNIPROTKB|E1C1P8	529	E1C1P8 "Uncharacterized protei	0.457	0.257	0.357	1.7e-37
UNIPROTKB|E1C7B5	543	SLC1A3 "Uncharacterized protei	0.464	0.254	0.368	2.2e-37
UNIPROTKB|E1C4F3	566	SLC1A7 "Uncharacterized protei	0.420	0.220	0.408	6.1e-37
WB|WBGene00001622	499	glt-4 [Caenorhabditis elegans	0.420	0.250	0.4	7.2e-37
ZFIN|ZDB-GENE-090708-3	537	slc1a3b "solute carrier family	0.420	0.232	0.376	8.9e-37
UNIPROTKB|F1MUT8	562	SLC1A7 "Uncharacterized protei	0.417	0.220	0.404	9.6e-37

FB|FBgn0026439 Eaat1 "Excitatory amino acid transporter 1" [Drosophila melanogaster (taxid:7227)]

 Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
 Identities = 121/282 (42%), Positives = 164/282 (58%)

Query:    30 VLDSMPDAWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSI 89
             ++ +    WS+RE MY+ FPGE+FL+MLKCLIVPLLVSSI SAIG LDLS+S ++  R+I
Sbjct:    37 IIKNSTGEWSKREIMYISFPGEIFLRMLKCLIVPLLVSSITSAIGGLDLSMSSKIATRAI 96

Query:    90 AYYCATTSIAVVEGIILVCTIRPGVGHASMKGAQAGNYSKXXXXXX--XXXXXXRVLFYI 147
              YY  TT  AV+ GI LV T+RPG G A +   Q  +  K              R +F  
Sbjct:    97 TYYFVTTISAVILGICLVTTLRPGQG-AKIVETQTESIDKASKVLTPDTLMDLVRNMFTD 155

Query:   148 LCV--------TELYFILCVT-----ELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGK 194
               +        TE+Y    ++     E W+ +     GSNVLGLV FS+ +G  I R+ +
Sbjct:   156 NIIQSTMFQHRTEIYENTSISPAQPMENWEFKSAQREGSNVLGLVMFSVILGTTIGRMRE 215

Query:   195 AGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVX 254
              G+ L   F +LSE +MTIT+WVIWISP G+ FL+A KII+M+S++ T+  LG YFITV 
Sbjct:   216 KGQLLQDFFTTLSEAMMTITSWVIWISPLGVAFLIAAKIIEMESIAATIQSLGWYFITVM 275

Query:   255 XXXXXXXXXXXPAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
                          ++    R  P+R+ A + Q +ATAFGT S
Sbjct:   276 IGLFLHGFGTIAVIFFLGTRRLPYRYIAKLSQVLATAFGTGS 317

GO:0015501 "glutamate:sodium symporter activity" evidence=ISS;IDA

GO:0015810 "aspartate transport" evidence=IC

GO:0015813 "L-glutamate transport" evidence=IC

GO:0005313 "L-glutamate transmembrane transporter activity" evidence=IDA

GO:0015183 "L-aspartate transmembrane transporter activity" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISS;IDA

GO:0016021 "integral to membrane" evidence=IC

GO:0006835 "dicarboxylic acid transport" evidence=IEA

GO:0017153 "sodium:dicarboxylate symporter activity" evidence=IEA

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0043005 "neuron projection" evidence=IDA

GO:0043195 "terminal bouton" evidence=IDA

GO:0031594 "neuromuscular junction" evidence=IDA

GO:0014853 "regulation of excitatory postsynaptic membrane potential involved in skeletal muscle contraction" evidence=IMP

GO:0008345 "larval locomotory behavior" evidence=IMP

GO:0007268 "synaptic transmission" evidence=IMP

ZFIN|ZDB-GENE-040718-414 slc1a1 "solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1" [Danio rerio (taxid:7955)]

 Score = 236 (88.1 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
 Identities = 51/138 (36%), Positives = 78/138 (56%)

Query:   159 VTELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVI 218
             +T+ +++ G +  G NVLGL+ F +  G+ I ++G+ G+ LL  F++L+E  M I   ++
Sbjct:   201 LTKDYKIVGSYSDGINVLGLIVFCVTFGLVIGKMGERGRILLEFFDALNEATMRIVQIIM 260

Query:   219 WISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVXXXXXXXXXXXXPAMYTFFVREWPF 278
                P GIFFL+A KII++        +LGLY +TV            P +Y  FVR+ PF
Sbjct:   261 CYMPIGIFFLIAAKIIEVDDWE-IFRKLGLYMVTVLSGLAIHSIIFLPLIYFVFVRKNPF 319

Query:   279 RFTANMGQAIATAFGTAS 296
              FT  M QA+ TA   +S
Sbjct:   320 TFTLGMAQALVTALMISS 337

GO:0017153 "sodium:dicarboxylate symporter activity" evidence=IEA

GO:0006835 "dicarboxylic acid transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

ZFIN|ZDB-GENE-030131-2159 slc1a3a "solute carrier family 1 (glial high affinity glutamate transporter), member 3a" [Danio rerio (taxid:7955)]

 Score = 252 (93.8 bits), Expect = 1.2e-38, Sum P(2) = 1.2e-38
 Identities = 52/127 (40%), Positives = 73/127 (57%)

Query:   170 VVGSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLV 229
             V G N LGLV FS+  G+ I  + + G+PL   F+ L+E +M +   ++W +P GI FL+
Sbjct:   231 VNGINALGLVVFSMCFGLIIGNMKEQGQPLRDFFDCLNEAIMRLVAIIMWYAPLGIMFLI 290

Query:   230 AEKIIDMKSLSHTVGQLGLYFITVXXXXXXXXXXXXPAMYTFFVREWPFRFTANMGQAIA 289
             A KI++M  LS   GQLG+Y ITV            P +Y    R+ PF F A + QA+ 
Sbjct:   291 AGKIVEMDDLSEMGGQLGMYTITVIIGLLIHAVIVLPLLYFLVTRKNPFVFIAGLLQALI 350

Query:   290 TAFGTAS 296
             TA GT+S
Sbjct:   351 TALGTSS 357

GO:0017153 "sodium:dicarboxylate symporter activity" evidence=IEA

GO:0006835 "dicarboxylic acid transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

ZFIN|ZDB-GENE-071004-45 slc1a6 "solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6" [Danio rerio (taxid:7955)]

 Score = 238 (88.8 bits), Expect = 3.6e-38, Sum P(2) = 3.6e-38
 Identities = 47/125 (37%), Positives = 72/125 (57%)

Query:   172 GSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAE 231
             G N LGLV FS+  G+ I  + + G+ L   F+ L+E +M +   +IW +P GI FL+A 
Sbjct:   260 GVNALGLVVFSMCFGLVIGNMKQQGQALRDFFDCLNEAIMRLVAIIIWYAPVGILFLIAG 319

Query:   232 KIIDMKSLSHTVGQLGLYFITVXXXXXXXXXXXXPAMYTFFVREWPFRFTANMGQAIATA 291
             KI++MK L+   GQLG+Y ++V            P ++    ++ PF F A + QA+ TA
Sbjct:   320 KIVEMKDLAQVGGQLGMYTVSVIVGLLIHGLLVLPLLFFVVTKKNPFTFIAGLLQALITA 379

Query:   292 FGTAS 296
              GT+S
Sbjct:   380 LGTSS 384

GO:0006835 "dicarboxylic acid transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0017153 "sodium:dicarboxylate symporter activity" evidence=IEA

UNIPROTKB|E1C1P8 E1C1P8 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 226 (84.6 bits), Expect = 1.7e-37, Sum P(2) = 1.7e-37
 Identities = 49/137 (35%), Positives = 74/137 (54%)

Query:   160 TELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIW 219
             T+ +++ G +  G NVLGL+ F +  G+ I ++G  G+ L+  F +L+E  M I   ++W
Sbjct:   200 TQEYKIVGMYSDGINVLGLIVFCLVFGMVIGKMGDKGQVLVDFFNALNEATMRIVQIIMW 259

Query:   220 ISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVXXXXXXXXXXXXPAMYTFFVREWPFR 279
               P GI FL+A KII+++       +LGLY  TV            P +Y   VR+ PFR
Sbjct:   260 YMPIGIVFLIAGKIIEVEDWE-IFRKLGLYMATVLSGLAIHSTIILPLIYLIIVRKNPFR 318

Query:   280 FTANMGQAIATAFGTAS 296
             F   M QA+ TA   +S
Sbjct:   319 FAMGMAQALLTALMISS 335

GO:0017153 "sodium:dicarboxylate symporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0015501 "glutamate:sodium symporter activity" evidence=IEA

GO:0051260 "protein homooligomerization" evidence=IEA

GO:0051938 "L-glutamate import" evidence=IEA

GO:0070779 "D-aspartate import" evidence=IEA

UNIPROTKB|E1C7B5 SLC1A3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 236 (88.1 bits), Expect = 2.2e-37, Sum P(2) = 2.2e-37
 Identities = 53/144 (36%), Positives = 78/144 (54%)

Query:   159 VTELWQMRGEWVV------GSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMT 212
             V  L QMR E V       G N LGLV FSI+ G+ I  + + G+ L   F+SL+E +M 
Sbjct:   222 VETLTQMREEMVPVPGSVNGVNALGLVVFSISFGLVIGSMKEQGQALKDFFDSLNEAIMR 281

Query:   213 ITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVXXXXXXXXXXXXPAMYTFF 272
             +   ++W +P GI FL+A KI++M+ +    GQL +Y +TV            P +Y   
Sbjct:   282 LVALIMWYAPLGILFLIAGKIVEMEDMGVIGGQLAMYTVTVIIGLLIHAVIVLPLLYFLI 341

Query:   273 VREWPFRFTANMGQAIATAFGTAS 296
              R+ P+ F   + QA+ TA GT+S
Sbjct:   342 TRKNPWVFIGGLIQALVTALGTSS 365

GO:0017153 "sodium:dicarboxylate symporter activity" evidence=IEA

GO:0005314 "high-affinity glutamate transmembrane transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006537 "glutamate biosynthetic process" evidence=IEA

GO:0007605 "sensory perception of sound" evidence=IEA

GO:0009416 "response to light stimulus" evidence=IEA

GO:0009449 "gamma-aminobutyric acid biosynthetic process" evidence=IEA

GO:0009611 "response to wounding" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0016595 "glutamate binding" evidence=IEA

GO:0021545 "cranial nerve development" evidence=IEA

GO:0031223 "auditory behavior" evidence=IEA

GO:0042493 "response to drug" evidence=IEA

GO:0042995 "cell projection" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0043205 "fibril" evidence=IEA

GO:0046677 "response to antibiotic" evidence=IEA

GO:0048667 "cell morphogenesis involved in neuron differentiation" evidence=IEA

GO:0050806 "positive regulation of synaptic transmission" evidence=IEA

GO:0050885 "neuromuscular process controlling balance" evidence=IEA

GO:0051938 "L-glutamate import" evidence=IEA

GO:0070779 "D-aspartate import" evidence=IEA

UNIPROTKB|E1C4F3 SLC1A7 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 227 (85.0 bits), Expect = 6.1e-37, Sum P(2) = 6.1e-37
 Identities = 51/125 (40%), Positives = 68/125 (54%)

Query:   172 GSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAE 231
             G NVLG+V FS  MGI + R+G +G PL+S  + L+E VM I    +W  PFGI FL+A 
Sbjct:   220 GMNVLGIVIFSATMGIMLGRMGNSGVPLVSFCQCLNESVMKIVAVAVWYFPFGIVFLIAG 279

Query:   232 KIIDMKSLSHTVGQLGLYFITVXXXXXXXXXXXXPAMYTFFVREWPFRFTANMGQAIATA 291
             KI++M   S    +LG Y ITV            P MY F  ++ P  F   + QA+  A
Sbjct:   280 KILEMDDPSAIGKKLGFYAITVVCGLVVHGLFILPMMYFFITKKNPIVFIRGILQALLIA 339

Query:   292 FGTAS 296
               T+S
Sbjct:   340 LATSS 344

GO:0016020 "membrane" evidence=IEA

GO:0017153 "sodium:dicarboxylate symporter activity" evidence=IEA

WB|WBGene00001622 glt-4 [Caenorhabditis elegans (taxid:6239)]

 Score = 224 (83.9 bits), Expect = 7.2e-37, Sum P(2) = 7.2e-37
 Identities = 50/125 (40%), Positives = 67/125 (53%)

Query:   172 GSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAE 231
             G N+LGLV FS+A+GI I  IG+ GKP+ + F+SL    M +  WVI  SP GI FL+A 
Sbjct:   197 GMNILGLVVFSVALGIVIGVIGEDGKPMKNFFKSLEACSMKLIGWVIIYSPVGITFLIAA 256

Query:   232 KIIDMKSLSHTVGQLGLYFITVXXXXXXXXXXXXPAMYTFFVREWPFRFTANMGQAIATA 291
             +I+ MK     + +L  Y ITV            P +     R  P +F   M QA+ TA
Sbjct:   257 QIVGMKDPGQELHRLMGYVITVILGLLIHAFVVIPLLCVVLARRNPIKFVGGMAQALLTA 316

Query:   292 FGTAS 296
               T+S
Sbjct:   317 LATSS 321

GO:0006835 "dicarboxylic acid transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0017153 "sodium:dicarboxylate symporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-090708-3 slc1a3b "solute carrier family 1 (glial high affinity glutamate transporter), member 3b" [Danio rerio (taxid:7955)]

 Score = 236 (88.1 bits), Expect = 8.9e-37, Sum P(2) = 8.9e-37
 Identities = 47/125 (37%), Positives = 71/125 (56%)

Query:   172 GSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAE 231
             G N LGLV FS+  G+ I  + + G+ L   F+SL+E +M +   ++W +P GI FL+A 
Sbjct:   233 GVNALGLVVFSMCFGLIIGNMKEQGQALRDFFDSLNEAIMRLVAIIMWYAPIGILFLIAG 292

Query:   232 KIIDMKSLSHTVGQLGLYFITVXXXXXXXXXXXXPAMYTFFVREWPFRFTANMGQAIATA 291
             KI++M  ++   GQLG+Y +TV            P +Y    R+ PF F   + QA+ TA
Sbjct:   293 KIVEMDDITAMGGQLGMYTVTVIIGLMIHGIIILPTLYFVITRKNPFIFITGLLQALITA 352

Query:   292 FGTAS 296
              GT+S
Sbjct:   353 LGTSS 357

GO:0006835 "dicarboxylic acid transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0017153 "sodium:dicarboxylate symporter activity" evidence=IEA

UNIPROTKB|F1MUT8 SLC1A7 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 226 (84.6 bits), Expect = 9.6e-37, Sum P(2) = 9.6e-37
 Identities = 51/126 (40%), Positives = 72/126 (57%)

Query:   172 GSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAE 231
             G NVLG+V FS  MGI + R+G +G PL+S  + L+E VM I    +W  PFGI FL+A 
Sbjct:   221 GMNVLGIVIFSATMGIMLGRMGDSGAPLVSFCQCLNESVMKIVAVAVWYFPFGIVFLIAG 280

Query:   232 KIIDMKSLSHTVGQ-LGLYFITVXXXXXXXXXXXXPAMYTFFVREWPFRFTANMGQAIAT 290
             KI++M + + TVG+ LG Y +TV            P +Y F  ++ P  F   + QA+  
Sbjct:   281 KILEMDNPT-TVGKKLGFYAVTVVCGLVVHGLFILPLLYFFITKKNPIVFIRGILQALLI 339

Query:   291 AFGTAS 296
             A  T+S
Sbjct:   340 ALATSS 345

GO:0017153 "sodium:dicarboxylate symporter activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	297
pfam00375	388	pfam00375, SDF, Sodium:dicarboxylate symporter fam	8e-48
COG1301	415	COG1301, GltP, Na+/H+-dicarboxylate symporters [En	1e-36
PRK13027	421	PRK13027, PRK13027, C4-dicarboxylate transporter D	1e-15
PRK01663	428	PRK01663, PRK01663, C4-dicarboxylate transporter D	1e-14
PRK11283	437	PRK11283, gltP, glutamate/aspartate:proton symport	1e-12
COG3633	407	COG3633, SstT, Na+/serine symporter [Amino acid tr	4e-07
PRK14695	319	PRK14695, PRK14695, serine/threonine transporter S	1e-05
COG1823	458	COG1823, COG1823, Predicted Na+/dicarboxylate symp	2e-05
PRK13628	402	PRK13628, PRK13628, serine/threonine transporter S	2e-05

>gnl|CDD|215884 pfam00375, SDF, Sodium:dicarboxylate symporter family

 Score =  163 bits (416), Expect = 8e-48
 Identities = 87/254 (34%), Positives = 137/254 (53%), Gaps = 23/254 (9%)

Query: 44  MYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSL-DLSLSKRVGFRSIAYYCATTSIAVVE 102
            +++  G+LF+ +LK L+VPL+  SIVS I SL D     ++G +++ Y+  TT+IA + 
Sbjct: 24  GWLKPLGDLFINLLKMLVVPLVFFSIVSGIASLGDGKKLGKLGGKTLLYFLVTTAIAAII 83

Query: 103 GIILVCTIRPGVGHASMKGAQAGNYSKTSLTTDTLMDLSRVLFYILCVTELYFILCVTEL 162
           G+++    +PGVG        A   S  +L   +L+D     F +  +    F       
Sbjct: 84  GLLVALLFQPGVGLLLS---AASAESAKTLEVPSLLD-----FLLNIIPSNIF------- 128

Query: 163 WQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISP 222
                  +   NVL ++ F+I  GIA+A +G+ GKPLL   ESL+EV+M +  WV+ ++P
Sbjct: 129 -----AALAEGNVLQVIVFAILFGIALAALGEKGKPLLKFLESLNEVIMKVVNWVMKLAP 183

Query: 223 FGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILLPAMYTFFVREWPFRFTA 282
            G+F L+A  +     L  T+G LG + +TV L L IH F++ P +  F     PF+F  
Sbjct: 184 IGVFALIANTVGTF-GLG-TLGSLGKFVLTVYLALAIHLFVVYPLLLKFLTGLNPFKFLK 241

Query: 283 NMGQAIATAFGTAS 296
            +  A+ TAF TAS
Sbjct: 242 KILPALLTAFSTAS 255

Length = 388

>gnl|CDD|224220 COG1301, GltP, Na+/H+-dicarboxylate symporters [Energy production and conversion]

 Score =  135 bits (341), Expect = 1e-36
 Identities = 76/257 (29%), Positives = 138/257 (53%), Gaps = 29/257 (11%)

Query: 44  MYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSL-DLSLSKRVGFRSIAYYCATTSIAVVE 102
           +Y++  G++F+K++K +I+PL+  ++V  I SL DL    R+G +++ Y+  TT++A+  
Sbjct: 33  IYLKPLGDIFIKLIKMIIIPLVFFTLVLGIASLGDLKKLGRLGGKTLIYFLVTTTLAIAI 92

Query: 103 GIILVCTIRPGVG-HASMKGAQAGNYSKTSLTTDTLMDL-SRVLFYILCVTELYFILCVT 160
           G+++   ++PG G +        G  S+ S+  D L+D+    +F  L            
Sbjct: 93  GLVVANVLQPGAGINIDPATLDTGAESEVSIL-DFLLDIIPTNIFGAL------------ 139

Query: 161 ELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAGKP-LLSVFESLSEVVMTITTWVIW 219
                        NVL ++FF+I  G+A+A +G+ GKP + ++FESLSE +  +T +V+ 
Sbjct: 140 ----------AEGNVLQILFFAILFGLALAALGEKGKPPVENLFESLSEAMFKVTNFVMR 189

Query: 220 ISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILLPAMYTFFVREWPFR 279
           ++P G+F L+A  +      S  +  LG   + V LGLL+  F++L  +        PF+
Sbjct: 190 LAPIGVFGLMAFTVAKYGFGS--LLSLGKLVLAVYLGLLLFVFVVLGLLLKLLSGFSPFK 247

Query: 280 FTANMGQAIATAFGTAS 296
           F   + +A+  AF T+S
Sbjct: 248 FLRYISEALLLAFSTSS 264

Length = 415

>gnl|CDD|183850 PRK13027, PRK13027, C4-dicarboxylate transporter DctA; Reviewed

 Score = 76.2 bits (188), Expect = 1e-15
 Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 40/236 (16%)

Query: 50  GELFLKMLKCLIVPLLVSSIVSAI-GSLDLSLSKRVGFRSIAYYCATTSIAVVEGIILVC 108
           G+ F+K++K LI P++   +VS I G+ DL    RVG +++ Y+   T+IA+V G++L  
Sbjct: 37  GDGFIKLIKMLIGPIVFCVVVSGIAGAGDLKKVGRVGLKAVIYFEVMTTIALVIGLVLAY 96

Query: 109 TIRPGVG--------HASMKGAQAGNYSKTSLTTDTLMDLSRVLFYILCVTELYFILCVT 160
              PGVG         A+     A N      T   L+ L                    
Sbjct: 97  LTGPGVGMNIDLRSLDAASLAGYAKNAQSLKGTAGFLLKLIPTTAV-------------- 142

Query: 161 ELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWI 220
                   +  G ++L ++ FS+  G A++ +G+  K +  + + LS V+  I  ++I +
Sbjct: 143 ------DAFAKG-DILQVLLFSVLFGSALSLLGERAKRVNRLIDELSHVLFRIMGFIIKL 195

Query: 221 SPFGIFFLVAEKI--IDMKSLSHTVGQLGLY------FITVLLGLL--IHGFILLP 266
           +P G+   +A       + SL      + ++      F+ V+LG +  + GF +  
Sbjct: 196 APLGVLGAIAFTTGKYGVGSLKQLGMLVAVFYLTCFVFVVVVLGAVMRLAGFSVFK 251

Length = 421

>gnl|CDD|234968 PRK01663, PRK01663, C4-dicarboxylate transporter DctA; Reviewed

 Score = 73.4 bits (181), Expect = 1e-14
 Identities = 64/236 (27%), Positives = 116/236 (49%), Gaps = 48/236 (20%)

Query: 50  GELFLKMLKCLIVPLLVSSIVSAIGSL-DLSLSKRVGFRSIAYYCATTSIAVVEGIILVC 108
           G+ F+K++K +I P++  ++V+ I  + D+    RVG +++ Y+   ++IA++ G+I+V 
Sbjct: 38  GDGFIKLIKMIIAPIIFCTVVTGIAGMGDMKKVGRVGGKALLYFEIVSTIALIIGLIVVN 97

Query: 109 TIRPGVG----HASMKGAQAGNY---SKTSLTTDTLMDLSRVLFYILCVTELYFILCVTE 161
            ++PG G     A++       Y   +    T D LMD                I+  T 
Sbjct: 98  VVQPGAGMNIDPATLDAKAVAQYAAQAHEQGTVDFLMD----------------IIPTT- 140

Query: 162 LWQMRGEWVVGS----NVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWV 217
                   VVG+    ++L ++ F++  G A+AR+G+ GKP+    ESLS V+  I   +
Sbjct: 141 --------VVGAFASGDILQVLLFAVLFGFALARLGEKGKPVFDFIESLSHVLFGIVNMI 192

Query: 218 IWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILLPAMYTFFV 273
           + ++P G F  +A           T+G+ G+  + V LG LI  F +   ++ F V
Sbjct: 193 MKLAPIGAFGAMA----------FTIGKYGVGSL-VQLGQLIGCFYITCILFVFVV 237

Length = 428

>gnl|CDD|183075 PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional

 Score = 67.1 bits (164), Expect = 1e-12
 Identities = 52/183 (28%), Positives = 97/183 (53%), Gaps = 13/183 (7%)

Query: 50  GELFLKMLKCLIVPLLVSSIVSAI-GSLDLSLSKRVGFRSIAYYCATTSIAVVEGIILVC 108
           G++F+ ++K ++VP+++S+++  I G  D     R+G ++I Y+   T++A++ GI L  
Sbjct: 45  GDIFIHLIKMIVVPIVISTLIVGIAGVGDAKQLGRIGAKTIIYFEVITTVAIILGITLAN 104

Query: 109 TIRPGVGHASMKGAQAGNYSKTSLTTDTLMDLSRVLFYILCVTELYFILCVTELWQMRGE 168
             +PG G   M      + SK   TT+ +   S    + L  T L  I         +GE
Sbjct: 105 VFQPGAG-IDMSQLATVDISKYQSTTEEVQSHS----HGLMGTILSLIPTNIFASMAKGE 159

Query: 169 WVVGSNVLGLVFFSIAMGIAIARIGKAGK-PLLSVFESLSEVVMTITTWVIWISPFGIFF 227
                 +L ++FFS+  G+ ++ +    + PL++VF S+SE +  +T  V+  +P G+F 
Sbjct: 160 ------MLPIIFFSVLFGLGLSSLPATHREPLVTVFRSVSETMFKVTHMVMRYAPVGVFA 213

Query: 228 LVA 230
           L+A
Sbjct: 214 LIA 216

Length = 437

>gnl|CDD|226159 COG3633, SstT, Na+/serine symporter [Amino acid transport and metabolism]

 Score = 50.5 bits (121), Expect = 4e-07
 Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 11/108 (10%)

Query: 174 NVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKI 233
           N +G++ ++I +G+A+       K   ++   LSE V  I   VI  +P GIF LVA  +
Sbjct: 146 NYIGILAWAIGLGLALRHASDTTK---NLVNDLSEAVSKIVKVVIRFAPIGIFGLVASTL 202

Query: 234 IDMKSLSHTVGQLGLY--FITVLLG-LLIHGFILLPAMYTFFVREWPF 278
            +        G L  Y   + VL+G +L    ++ P +  + +R  P+
Sbjct: 203 AE-----TGFGALWGYAQLLAVLVGCMLFVALVVNPLIVYWKIRRNPY 245

Length = 407

>gnl|CDD|173158 PRK14695, PRK14695, serine/threonine transporter SstT; Provisional

 Score = 45.8 bits (108), Expect = 1e-05
 Identities = 35/128 (27%), Positives = 67/128 (52%), Gaps = 6/128 (4%)

Query: 170 VVGSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLV 229
           ++ +N +G++ +++  GIA+    K  K LL   +++++V   I  W+I ++PFGI  LV
Sbjct: 56  LLTANYIGILSWAVIFGIAMREASKNSKELL---KTIADVTSKIVEWIINLAPFGILGLV 112

Query: 230 AEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILLPAMYTFFVREWPFRFTAN-MGQAI 288
            + I D    S  +   G+  + ++  +L    ++ P +  FF+R  P+    N +  + 
Sbjct: 113 FKTISDKGVGS--LANYGILLVLLVTTMLFVAPVVNPLIAFFFMRRNPYPLVWNCLRVSG 170

Query: 289 ATAFGTAS 296
            TAF T S
Sbjct: 171 VTAFFTRS 178

Length = 319

>gnl|CDD|224736 COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only]

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 54/260 (20%), Positives = 116/260 (44%), Gaps = 40/260 (15%)

Query: 45  YVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLS-KRVGFRSIAYYCATTSIAVVEG 103
           +    G  ++++L+ +++PL+  SI+SAI  LD +    ++   +I     TT+IA + G
Sbjct: 65  WFNIVGNGYVRLLQMIVMPLVFISILSAIAKLDNASKLGKISLLTIGTLLFTTAIAALIG 124

Query: 104 IILVCTIRPGVGHA---SMKGAQAGNYSKTSLTTDTLMDLSRVLFYILCVTELYFILCVT 160
           I+        V      + +G   G              +S +  Y+  V +L     + 
Sbjct: 125 IL--------VALLFGLTAEGLVQG--------DAETARISEIQTYVGKVADLTIPQLIL 168

Query: 161 ELW-QMRGEWVVGSN---VLGLVFFSIAMGIAIARIGK----AGKPLLSVFESLSEVVMT 212
            L  +     + G+N   ++ +V F+  +GIA  ++ K     G+   +  ++L  +VM 
Sbjct: 169 SLIPKNPFADLTGANPTSIIAVVIFAAFLGIAALKLSKKDPEKGERFKAAIDTLQSIVMK 228

Query: 213 ITTWVIWISPFGIFFLVAEKII--DMKSLSHTVGQLGLYFITVLLGLLIHGFILL----- 265
           +   VI ++P+G+  L+ + +   +++ +      +   +I + +  ++HG +L      
Sbjct: 229 LVRLVIRLTPYGVLALMTKVVATSNLEDIIKLGSFIVASYIAIFIMFVVHGILLALNGVN 288

Query: 266 PAMYTFFVREWP---FRFTA 282
           P    +F + WP   F FT+
Sbjct: 289 PI--KYFKKVWPVLTFAFTS 306

Length = 458

>gnl|CDD|184190 PRK13628, PRK13628, serine/threonine transporter SstT; Provisional

 Score = 45.2 bits (108), Expect = 2e-05
 Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 13/109 (11%)

Query: 174 NVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKI 233
           N +G++ ++I +G+A+       K   +V   LSE V  I  WVI  +P GIF LVA   
Sbjct: 146 NYIGILAWAIGLGLALRHASDTTK---NVVNDLSEAVSQIVKWVIRFAPIGIFGLVAS-- 200

Query: 234 IDMKSLSHT-VGQLGLY--FITVLLG-LLIHGFILLPAMYTFFVREWPF 278
               +L+ T    L  Y   + VL+G +L    ++ P +  + +R  P+
Sbjct: 201 ----TLAETGFSALAGYAQLLAVLVGCMLFVALVVNPLIVFWKIRRNPY 245

Length = 402

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	297
KOG3787|consensus	507		100.0
PRK01663	428	C4-dicarboxylate transporter DctA; Reviewed	100.0
PRK11283	437	gltP glutamate/aspartate:proton symporter; Provisi	100.0
PRK13027	421	C4-dicarboxylate transporter DctA; Reviewed	100.0
COG1301	415	GltP Na+/H+-dicarboxylate symporters [Energy produ	100.0
PF00375	390	SDF: Sodium:dicarboxylate symporter family; InterP	100.0
PRK13628	402	serine/threonine transporter SstT; Provisional	100.0
COG1823	458	Predicted Na+/dicarboxylate symporter [General fun	100.0
PRK14695	319	serine/threonine transporter SstT; Provisional	99.96
COG3633	407	SstT Na+/serine symporter [Amino acid transport an	99.86

>KOG3787|consensus

Probab=100.00  E-value=4.4e-57  Score=426.56  Aligned_cols=264  Identities=45%  Similarity=0.745  Sum_probs=233.9

Q ss_pred             cCCCccchhhhhhccccHHHHHHHHhhhHHHHHHHHHHHHhhcCCcccchhhhhHHHHHHHHHHHHHHHHHHHHHhhhCC
Q psy13811         33 SMPDAWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATTSIAVVEGIILVCTIRP  112 (297)
Q Consensus        33 ~~~~~~~~~~~~~i~~~G~lfi~lLkm~VvPLVf~sii~gI~~l~~~~~grig~~tl~~~l~tt~iA~~iGl~~~~~~~p  112 (297)
                      -.+.+++++...++++|||+|+|+|||+|+|||++|+++|.+++|.|..||+|.|++.||+.||++|+++|++++..+||
T Consensus        36 LR~~~ls~~~i~yi~FPGElfmrmLkmmILPLI~SSlisgla~LDa~~sGrlg~~av~YY~~TT~~Av~lGI~lV~~IhP  115 (507)
T KOG3787|consen   36 LRPLSLSPDEIMYISFPGELLMRMLKMMILPLIVSSLISGLASLDAKASGRLGMRAVVYYMSTTIIAVILGIALVLIIHP  115 (507)
T ss_pred             ecCCCCChhheeeeeCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHHHHHheeEEecC
Confidence            35678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccccccCCccc-ccccccchHHhHhhhcchhhHHHH-------HHh---hhhhhh---hhhcc--ccccCCchH
Q psy13811        113 GVGHASMKGAQAGNYSK-TSLTTDTLMDLSRVLFYILCVTEL-------YFI---LCVTEL---WQMRG--EWVVGSNVL  176 (297)
Q Consensus       113 G~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~liP~n~f~~l-------~~~---~n~~~~---~~~~~--~~~~~~n~L  176 (297)
                      |.+... .+.+.++..+ +.+..|+++|+++|+||+|++++=       |.+   .++.++   ..+..  .+.+|.|+|
T Consensus       116 G~~~~~-~~~~~~~~~~~~vs~~DtfLDLiRNmFPeNlvqAtf~q~~T~y~~~~~~~~~~~t~~~~~~~~~~~~~GmNvL  194 (507)
T KOG3787|consen  116 GDPTKK-NELGREGLIDSNVSTLDTFLDLIRNMFPENLVQATFQQYQTKYKPVTKASPGNATEEALPKGVPGYTDGMNVL  194 (507)
T ss_pred             CChhhh-cccCcccccccccchHHHHHHHHHhhCcHHHHHHHHHHHeeEEEeecccCCCCccccccccCccccccCccch
Confidence            997532 1222122222 556679999999999999987763       211   122211   11222  567899999


Q ss_pred             HHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH
Q psy13811        177 GLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLG  256 (297)
Q Consensus       177 ~iivFAi~~G~al~~~~~~~~~l~~~~~~l~~~~~~iv~~Ii~~aPigV~~lia~~i~~~~~~~~l~~~l~~~vl~v~~~  256 (297)
                      ++++||+.||++++++|||++.+.+||+++++++||++.|+|||+|+|+.+++|+++.+.++++...++|++|+.++.+|
T Consensus       195 GlVvF~~~fGivig~lG~~g~~lv~FF~~L~e~iMklV~~iMWy~PvGI~fLIagkIlem~Dl~~~~~~Lg~Yv~TVi~G  274 (507)
T KOG3787|consen  195 GLVVFCIVFGIVIGKLGEKGQVLVDFFNSLNEAIMKLVSWIMWYSPVGILFLIAGKILEMEDLGVTARQLGMYVVTVILG  274 (507)
T ss_pred             hHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHhhhccccHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhcCCHHHHHHHhHHHHHhhhcccCC
Q psy13811        257 LLIHGFILLPAMYTFFVREWPFRFTANMGQAIATAFGTASR  297 (297)
Q Consensus       257 ~~i~~~vvlpli~~~~~~~nP~~f~~~~~~all~Af~T~SS  297 (297)
                      +++|.++++|++|++++|+||++|++++..|++|||+|+||
T Consensus       275 L~iH~~i~lPliYF~~TrkNP~~f~~Gm~Qal~TA~gTsSS  315 (507)
T KOG3787|consen  275 LFIHGFIVLPLIYFVVTRKNPFRFIAGLLQALATAFGTASS  315 (507)
T ss_pred             HHHHHHHHhhheeEEEEccChHHHHHHHHHHHHHHHhcccc
Confidence            99999999999999999999999999999999999999997

>PRK01663 C4-dicarboxylate transporter DctA; Reviewed

Probab=100.00  E-value=1.4e-47  Score=372.42  Aligned_cols=238  Identities=24%  Similarity=0.414  Sum_probs=210.0

Q ss_pred             hhhhhhccccHHHHHHHHhhhHHHHHHHHHHHHhhcC-CcccchhhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCCCccc
Q psy13811         40 ERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSL-DLSLSKRVGFRSIAYYCATTSIAVVEGIILVCTIRPGVGHAS  118 (297)
Q Consensus        40 ~~~~~~i~~~G~lfi~lLkm~VvPLVf~sii~gI~~l-~~~~~grig~~tl~~~l~tt~iA~~iGl~~~~~~~pG~~~~~  118 (297)
                      ++...|++++||+|+|+|||+|+|+||+|++.||+++ +.++.||++.|++.||+.+|.+|+++|+.++++++||.+.+.
T Consensus        28 ~~~~~~l~~iG~iFl~lLkm~VvPLVf~Sii~gI~~l~~~~~lg~i~~~~~~~f~~tt~iA~~lgl~~~~l~~pg~g~~~  107 (428)
T PRK01663         28 PELGAQMKPLGDGFIKLIKMIIAPIIFCTVVTGIAGMGDMKKVGRVGGKALLYFEIVSTIALIIGLIVVNVVQPGAGMNI  107 (428)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCc
Confidence            3467889999999999999999999999999999999 779999999999999999999999999999999999987642


Q ss_pred             cc-ccc--cCCcccccccccchHHhHhhhcchhhHHHHHHhhhhhhhhhhccccccCCchHHHHHHHHHHHHHHHhhccc
Q psy13811        119 MK-GAQ--AGNYSKTSLTTDTLMDLSRVLFYILCVTELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKA  195 (297)
Q Consensus       119 ~~-~~~--~~~~~~~~~~~~~~~~~i~~liP~n~f~~l~~~~n~~~~~~~~~~~~~~~n~L~iivFAi~~G~al~~~~~~  195 (297)
                      .. ..+  +.....+..+.+++.|++.+++|+|+|+++                + ++|+||+++||+++|+|+.+.+||
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~iP~Nif~al----------------a-~gnvL~vIvFai~~GiAl~~~~e~  170 (428)
T PRK01663        108 DPATLDAKAVAQYAAQAHEQGTVDFLMDIIPTTVVGAF----------------A-SGDILQVLLFAVLFGFALARLGEK  170 (428)
T ss_pred             ccccccchhhcccccccccccHHHHHHHHCCCchHHHH----------------h-cCChHHHHHHHHHHHHHHHhcccc
Confidence            21 001  000011111234789999999999999996                4 689999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy13811        196 GKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILLPAMYTFFVRE  275 (297)
Q Consensus       196 ~~~l~~~~~~l~~~~~~iv~~Ii~~aPigV~~lia~~i~~~~~~~~l~~~l~~~vl~v~~~~~i~~~vvlpli~~~~~~~  275 (297)
                      ++++++++|+++++++|+++|+|+++|+|||+++|+.++++ |.+.+ .++++|++++|.++++|.++++|++++ ++|+
T Consensus       171 ~~~l~~~~~~~~~vi~kii~~im~laPiGVfaliA~~v~~~-g~~~l-~~l~~~l~~~~~~~~i~~~vv~~~i~~-~~~~  247 (428)
T PRK01663        171 GKPVFDFIESLSHVLFGIVNMIMKLAPIGAFGAMAFTIGKY-GVGSL-VQLGQLIGCFYITCILFVFVVLGAIAR-LTGF  247 (428)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCC
Confidence            99999999999999999999999999999999999999874 77655 599999999999999999999998875 6899


Q ss_pred             CHHHHHHHhHHHHHhhhcccCC
Q psy13811        276 WPFRFTANMGQAIATAFGTASR  297 (297)
Q Consensus       276 nP~~f~~~~~~all~Af~T~SS  297 (297)
                      ||++|+|+++||+++||+|+||
T Consensus       248 ~p~~f~k~~~~~~~~AfsT~SS  269 (428)
T PRK01663        248 SIFKFIRYIKEELLIVLGTSSS  269 (428)
T ss_pred             CHHHHHHHHHHHHHHhhecccH
Confidence            9999999999999999999998

>PRK11283 gltP glutamate/aspartate:proton symporter; Provisional

Probab=100.00  E-value=6.3e-47  Score=368.60  Aligned_cols=235  Identities=21%  Similarity=0.426  Sum_probs=205.9

Q ss_pred             hhhccccHHHHHHHHhhhHHHHHHHHHHHHhhcC-CcccchhhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCCCccccc-
Q psy13811         43 RMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSL-DLSLSKRVGFRSIAYYCATTSIAVVEGIILVCTIRPGVGHASMK-  120 (297)
Q Consensus        43 ~~~i~~~G~lfi~lLkm~VvPLVf~sii~gI~~l-~~~~~grig~~tl~~~l~tt~iA~~iGl~~~~~~~pG~~~~~~~-  120 (297)
                      ..|++++||+|+|++||+|+|+||+|++.|++++ |.+++||++.|++.||+.||++|+.+|+.++++++||.+.+.+. 
T Consensus        38 ~~~l~~~G~iFl~lLkm~VvPLVf~Sii~gI~~l~~~~~lg~ig~~~~~~f~~tt~ia~~igl~~~~i~~PG~g~~~~~~  117 (437)
T PRK11283         38 SNLLSPAGDIFIHLIKMIVVPIVISTLIVGIAGVGDAKQLGRIGAKTIIYFEVITTVAIILGITLANVFQPGAGIDMSQL  117 (437)
T ss_pred             HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccc
Confidence            4689999999999999999999999999999999 78999999999999999999999999999999999998754211 


Q ss_pred             ---cccc-CCccc-ccccccchHHhHhhhcchhhHHHHHHhhhhhhhhhhccccccCCchHHHHHHHHHHHHHHHhhccc
Q psy13811        121 ---GAQA-GNYSK-TSLTTDTLMDLSRVLFYILCVTELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKA  195 (297)
Q Consensus       121 ---~~~~-~~~~~-~~~~~~~~~~~i~~liP~n~f~~l~~~~n~~~~~~~~~~~~~~~n~L~iivFAi~~G~al~~~~~~  195 (297)
                         +..+ +...+ ...+.+++.|++.+++|+|+|+++                + ++|+||+++||+++|+|+..++|+
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~iP~N~~~al----------------a-~gn~L~vIiFai~~GiAl~~~~~~  180 (437)
T PRK11283        118 ATVDISKYQSTTEEVQSHSHGLMGTILSLIPTNIFASM----------------A-KGEMLPIIFFSVLFGLGLSSLPAT  180 (437)
T ss_pred             hhhhhhhhcccccccccccccHHHHHHHHcCCChHHHH----------------h-cCChHHHHHHHHHHHHHHHccCch
Confidence               0000 00011 112235688999999999999986                4 689999999999999999988654


Q ss_pred             -chHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy13811        196 -GKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILLPAMYTFFVR  274 (297)
Q Consensus       196 -~~~l~~~~~~l~~~~~~iv~~Ii~~aPigV~~lia~~i~~~~~~~~l~~~l~~~vl~v~~~~~i~~~vvlpli~~~~~~  274 (297)
                       ++++.+++|+++++++|+++|+|+++|+|||+++|+.+++ +|.+.+. ++++|++++|+++++|.++++|++++ ++|
T Consensus       181 ~~~~l~~~~~~~~~~~~kii~~im~~aPiGVfaliA~~~~~-~g~~~l~-~l~~~l~~~~~~~~l~~~vv~~~i~~-~~~  257 (437)
T PRK11283        181 HREPLVTVFRSVSETMFKVTHMVMRYAPVGVFALIAVTVAN-FGFASLW-PLAKLVLLVYFAILFFALVVLGIVAR-LCG  257 (437)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-HhC
Confidence             6899999999999999999999999999999999999987 4777665 89999999999999999999998875 579


Q ss_pred             CCHHHHHHHhHHHHHhhhcccCC
Q psy13811        275 EWPFRFTANMGQAIATAFGTASR  297 (297)
Q Consensus       275 ~nP~~f~~~~~~all~Af~T~SS  297 (297)
                      +||++|+|+++||+++||+|+||
T Consensus       258 ~np~~~~k~~~~~~~~AfsT~SS  280 (437)
T PRK11283        258 LSIWILIRILKDELILAYSTASS  280 (437)
T ss_pred             CCHHHHHHHHHHHHHHHheccch
Confidence            99999999999999999999998

>PRK13027 C4-dicarboxylate transporter DctA; Reviewed

Probab=100.00  E-value=8.6e-47  Score=366.13  Aligned_cols=238  Identities=24%  Similarity=0.367  Sum_probs=209.2

Q ss_pred             hhhhhhccccHHHHHHHHhhhHHHHHHHHHHHHhhcC-CcccchhhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCCCccc
Q psy13811         40 ERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSL-DLSLSKRVGFRSIAYYCATTSIAVVEGIILVCTIRPGVGHAS  118 (297)
Q Consensus        40 ~~~~~~i~~~G~lfi~lLkm~VvPLVf~sii~gI~~l-~~~~~grig~~tl~~~l~tt~iA~~iGl~~~~~~~pG~~~~~  118 (297)
                      ++...|++++||+|+|+|||+|+|+||+|++.||+++ |.+++||++.|++.||+.+|.+|+.+|+.++++++||.+.+.
T Consensus        27 ~~~~~~l~~iG~iFl~lLkm~VvPlVf~sii~gI~~l~~~~~~grig~~~~~~f~~tt~ia~~igl~~~~~~~pg~g~~~  106 (421)
T PRK13027         27 PHFAESLKPLGDGFIKLIKMLIGPIVFCVVVSGIAGAGDLKKVGRVGLKAVIYFEVMTTIALVIGLVLAYLTGPGVGMNI  106 (421)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCccchhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccc
Confidence            3456789999999999999999999999999999999 779999999999999999999999999999999999987642


Q ss_pred             cc-ccccC--Ccc-cccccccchHHhHhhhcchhhHHHHHHhhhhhhhhhhccccccCCchHHHHHHHHHHHHHHHhhcc
Q psy13811        119 MK-GAQAG--NYS-KTSLTTDTLMDLSRVLFYILCVTELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGK  194 (297)
Q Consensus       119 ~~-~~~~~--~~~-~~~~~~~~~~~~i~~liP~n~f~~l~~~~n~~~~~~~~~~~~~~~n~L~iivFAi~~G~al~~~~~  194 (297)
                      .. +.+.+  ... .+.++.+++.|++.+++|+|+|+++                + ++|+||+++||+++|+|+.+.+|
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~iP~Nif~al----------------a-~gn~L~vIvFAi~~GiAl~~~~e  169 (421)
T PRK13027        107 DLRSLDAASLAGYAKNAQSLKGTAGFLLKLIPTTAVDAF----------------A-KGDILQVLLFSVLFGSALSLLGE  169 (421)
T ss_pred             cccccchhhhhhhcccccccccHHHHHHHHCccchHHHh----------------h-cCChHHHHHHHHHHHHHHHhcCc
Confidence            21 11100  000 0112224688999999999999986                4 67999999999999999999999


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy13811        195 AGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILLPAMYTFFVR  274 (297)
Q Consensus       195 ~~~~l~~~~~~l~~~~~~iv~~Ii~~aPigV~~lia~~i~~~~~~~~l~~~l~~~vl~v~~~~~i~~~vvlpli~~~~~~  274 (297)
                      |++++.+++|+++++++|+++|+|+++|+|||+++|+.+++ .|.+.+ .++++|++++++++++|.++++|++.+ .+|
T Consensus       170 ~~~~l~~~~~~~~~~~~kii~~im~laPigVfaliA~~~~~-~g~~~l-~~l~~~l~~~~~~~~i~~~vv~~~i~~-~~~  246 (421)
T PRK13027        170 RAKRVNRLIDELSHVLFRIMGFIIKLAPLGVLGAIAFTTGK-YGVGSL-KQLGMLVAVFYLTCFVFVVVVLGAVMR-LAG  246 (421)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HcC
Confidence            99999999999999999999999999999999999999987 467654 599999999999999999999998875 689


Q ss_pred             CCHHHHHHHhHHHHHhhhcccCC
Q psy13811        275 EWPFRFTANMGQAIATAFGTASR  297 (297)
Q Consensus       275 ~nP~~f~~~~~~all~Af~T~SS  297 (297)
                      +||++|+|+++|++++||+|+||
T Consensus       247 ~~p~~~~k~~~~~~~~Af~T~SS  269 (421)
T PRK13027        247 FSVFKLIRYLREELLIVLGTASS  269 (421)
T ss_pred             CCHHHHHHHHHHHHHHHhhhcch
Confidence            99999999999999999999998

>COG1301 GltP Na+/H+-dicarboxylate symporters [Energy production and conversion]

Probab=100.00  E-value=8.9e-47  Score=362.43  Aligned_cols=231  Identities=30%  Similarity=0.576  Sum_probs=209.4

Q ss_pred             hhhccccHHHHHHHHhhhHHHHHHHHHHHHhhcC-CcccchhhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCCCccccc-
Q psy13811         43 RMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSL-DLSLSKRVGFRSIAYYCATTSIAVVEGIILVCTIRPGVGHASMK-  120 (297)
Q Consensus        43 ~~~i~~~G~lfi~lLkm~VvPLVf~sii~gI~~l-~~~~~grig~~tl~~~l~tt~iA~~iGl~~~~~~~pG~~~~~~~-  120 (297)
                      ..+++++||+|+|++||+++|+||++++.||+++ |.|+.||+|+|++.||+.+|.+|..+|+.+++.+|||.+.+.+. 
T Consensus        32 ~~~l~plg~~Fi~Likmii~PlVf~tlv~gIa~~~~~k~~gr~g~ktl~yf~~tt~~A~~iGl~~~~~~~Pg~g~~~~~~  111 (415)
T COG1301          32 AIYLKPLGDIFIKLIKMIIIPLVFFTLVLGIASLGDLKKLGRLGGKTLIYFLVTTTLAIAIGLVVANVLQPGAGINIDPA  111 (415)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCcc
Confidence            4889999999999999999999999999999999 78999999999999999999999999999999999998775432 


Q ss_pred             ccccCCcccccccccchHHhHhhhcchhhHHHHHHhhhhhhhhhhccccccCCchHHHHHHHHHHHHHHHhhcccchH-H
Q psy13811        121 GAQAGNYSKTSLTTDTLMDLSRVLFYILCVTELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAGKP-L  199 (297)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~i~~liP~n~f~~l~~~~n~~~~~~~~~~~~~~~n~L~iivFAi~~G~al~~~~~~~~~-l  199 (297)
                      +.+...  +.   ..++.+++.+++|+|+|+++                + +||+||+++||+++|+++..++|++++ +
T Consensus       112 ~~~~~~--~~---~~~~~~~l~~iiP~ni~~a~----------------a-~g~vLqil~fail~G~al~~~~~~~~~~v  169 (415)
T COG1301         112 TLDTGA--ES---EVSILDFLLDIIPTNIFGAL----------------A-EGNVLQILFFAILFGLALAALGEKGKPPV  169 (415)
T ss_pred             ccCCcc--cc---cchHHHHHHhhcCCChHhHh----------------c-CCChHHHHHHHHHHHHHHHHcccccchHH
Confidence            111111  10   22389999999999999986                5 479999999999999999999998876 7


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH
Q psy13811        200 LSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILLPAMYTFFVREWPFR  279 (297)
Q Consensus       200 ~~~~~~l~~~~~~iv~~Ii~~aPigV~~lia~~i~~~~~~~~l~~~l~~~vl~v~~~~~i~~~vvlpli~~~~~~~nP~~  279 (297)
                      .+++|+++++++|+++|||+++|+|+|+++|+.+++ +|.+.+. ++++|++++|+++++|.+++||++.+.++|.||++
T Consensus       170 ~~~~~~~~~~~~~v~~~vm~laPigvf~~~a~~v~~-~G~~~L~-~l~~~v~~~~~~~~l~~~vvl~~~~~~~~g~s~~~  247 (415)
T COG1301         170 ENLFESLSEAMFKVTNFVMRLAPIGVFGLMAFTVAK-YGFGSLL-SLGKLVLAVYLGLLLFVFVVLGLLLKLLSGFSPFK  247 (415)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH-hcHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence            899999999999999999999999999999999887 5787776 99999999999999999999999998888999999


Q ss_pred             HHHHhHHHHHhhhcccCC
Q psy13811        280 FTANMGQAIATAFGTASR  297 (297)
Q Consensus       280 f~~~~~~all~Af~T~SS  297 (297)
                      |+|+++|++++||+|+||
T Consensus       248 ~~r~~~~~~~~Af~T~SS  265 (415)
T COG1301         248 FLRYISEALLLAFSTSSS  265 (415)
T ss_pred             HHHHHHHHHHHHHhcchh
Confidence            999999999999999998

>PF00375 SDF: Sodium:dicarboxylate symporter family; InterPro: IPR001991 It has been shown [] that integral membrane proteins that mediate the uptake of a wide variety of molecules with the concomitant uptake of sodium ions (sodium symporters) can be grouped, on the basis of sequence and functional similarities into a number of distinct families

Probab=100.00  E-value=2.3e-46  Score=360.89  Aligned_cols=239  Identities=37%  Similarity=0.658  Sum_probs=205.5

Q ss_pred             ccchhhhhhccccHHHHHHHHhhhHHHHHHHHHHHHhhcC-CcccchhhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCCC
Q psy13811         37 AWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSL-DLSLSKRVGFRSIAYYCATTSIAVVEGIILVCTIRPGVG  115 (297)
Q Consensus        37 ~~~~~~~~~i~~~G~lfi~lLkm~VvPLVf~sii~gI~~l-~~~~~grig~~tl~~~l~tt~iA~~iGl~~~~~~~pG~~  115 (297)
                      ++.++...|++++||+|+|++||+++|+||+|++.|++++ +.++.||+++|++.||..+|.+|+.+|+.++.+++||..
T Consensus        19 ~~~~~~~~~l~~~G~lfi~ll~~~v~PLVf~sii~gi~~l~~~~~~g~i~~~~i~~~~~~t~~A~~ig~~~~~~~~pg~~   98 (390)
T PF00375_consen   19 DFSPEAAQWLSFPGDLFIRLLKMLVLPLVFSSIISGIASLGDAKKLGRIGGRTILYFLLTTLLAAAIGLLVALLFQPGAS   98 (390)
T ss_dssp             TTHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHSHT-TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SS-T
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCccccccccHHHHHHHHHHHHHHHHHHHHHHHheeeCCCcc
Confidence            5678899999999999999999999999999999999999 689999999999999999999999999999999999921


Q ss_pred             cccccccccCCcccccccccchHHhHhhhcchhhHHHHHHhhhhhhhhhhccccccCCchHHHHHHHHHHHHHHHhhccc
Q psy13811        116 HASMKGAQAGNYSKTSLTTDTLMDLSRVLFYILCVTELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKA  195 (297)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~liP~n~f~~l~~~~n~~~~~~~~~~~~~~~n~L~iivFAi~~G~al~~~~~~  195 (297)
                      ....   +.....++..+.+++.|++++++|+|+++++                + ++|+|++++||+++|+++.+++||
T Consensus        99 ~~~~---~~~~~~~~~~~~~~~~~~~~~~iP~Ni~~a~----------------~-~~~~L~ivvfai~~G~al~~~~~~  158 (390)
T PF00375_consen   99 GVRA---SSAVSSISSSESPSLLDFLRNLIPSNIFEAF----------------A-NGNILGIVVFAILFGVALGRLGEK  158 (390)
T ss_dssp             TS-S---STTSS--------SSHHHHHCTS-SSHHHHH----------------H-SS-HHHHHHHHHHHHHHHHHHHTS
T ss_pred             cccc---ccccccccccccccchhhhccccCCcHHHhh----------------h-hcccchhhhHHHHHHHHHHHHhhh
Confidence            1100   1111122334567899999999999999996                4 689999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy13811        196 GKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILLPAMYTFFVRE  275 (297)
Q Consensus       196 ~~~l~~~~~~l~~~~~~iv~~Ii~~aPigV~~lia~~i~~~~~~~~l~~~l~~~vl~v~~~~~i~~~vvlpli~~~~~~~  275 (297)
                      +|++++++|++|++++|+++|+++++|+|+++++++.+++ +|.+.+. ++++|++++++++++|.++++|++++.++|+
T Consensus       159 ~~~~~~~~~~~~~~~~~ii~~i~~~~Pigv~~l~a~~~~~-~~~~~l~-~l~~~v~~~~~~~~i~~~v~~pl~~~~~~~~  236 (390)
T PF00375_consen  159 GKPLIDFFESLNEVIMKIINWIMKLAPIGVFGLIANSIAT-QGLSILG-ALGKFVLTVYVALLIHLFVVLPLILFVLTRK  236 (390)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHS-SCCGHHH-HHHHHHHHHHHHHHHHHHHTHHHHHH-TTT-
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cChhhHH-HHHHHHHHHHHHHHHHHHHHhhHHHhhhcCC
Confidence            9999999999999999999999999999999999999988 6777666 9999999999999999999999999989999


Q ss_pred             CHHHHHHHhHHHHHhhhcccCC
Q psy13811        276 WPFRFTANMGQAIATAFGTASR  297 (297)
Q Consensus       276 nP~~f~~~~~~all~Af~T~SS  297 (297)
                      ||++|+|+++||+++||+|+||
T Consensus       237 np~~~~~~~~~~~l~Af~T~SS  258 (390)
T PF00375_consen  237 NPFKFLKAMLPALLTAFSTSSS  258 (390)
T ss_dssp             -HHHHHHHTHHHHHHHHHHT-T
T ss_pred             CHHHHHHHHHHHHHHHhhccCC
Confidence            9999999999999999999998

One of these families [] is known as the sodium:dicarboxylate symporter family (SDF). Such re-uptake of neurotransmitters from the synapses, is thought to be an important mechanism for terminating their action, by removing these chemicals from the synaptic cleft, and transporting them into presynaptic nerve terminals, and surrounding neuroglia. this removal is also believed to prevent them accumulating to the point of reaching neurotoxic [, ]. The structure of these transporter proteins has been variously reported to contain from 8 to 10 transmembrane (TM) regions, although 10 now seems to be the accepted value. Members of the family include: several mammalian excitatory amino acid transporters, and a number of bacterial transporters. They vary with regars to their dependence on transport of sodium, and other ions.; GO: 0017153 sodium:dicarboxylate symporter activity, 0006835 dicarboxylic acid transport, 0016020 membrane; PDB: 3V8G_B 1XFH_A 3KBC_B 2NWX_B 3V8F_B 2NWL_B 2NWW_A.

>PRK13628 serine/threonine transporter SstT; Provisional

Probab=100.00  E-value=3e-42  Score=332.66  Aligned_cols=229  Identities=19%  Similarity=0.272  Sum_probs=193.6

Q ss_pred             hhhhhhccccHHHHHHHHhhhHHHHHHHHHHHHhhcCCc-ccchhhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCCCccc
Q psy13811         40 ERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDL-SLSKRVGFRSIAYYCATTSIAVVEGIILVCTIRPGVGHAS  118 (297)
Q Consensus        40 ~~~~~~i~~~G~lfi~lLkm~VvPLVf~sii~gI~~l~~-~~~grig~~tl~~~l~tt~iA~~iGl~~~~~~~pG~~~~~  118 (297)
                      ++...|++++||+|+|++||+|+|+||+|++.|++++++ ++.+  +++++.||+.||++|+.+|+.++++++||.+.+.
T Consensus        35 ~~~~~~l~~iG~iFl~llkmiV~PLVf~sIv~gI~~l~~~~~~~--~~~~i~~~~~tt~ia~~~gl~~~~l~~~g~~~~~  112 (402)
T PRK13628         35 PPAAEAVGLLGTLFVGALKAVAPILVFVLVMASIANHKKGQKTN--IRPILVLYLLGTFLAALVAVVASFLFPSTLVLVA  112 (402)
T ss_pred             HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccc--HHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCccc
Confidence            456789999999999999999999999999999999943 3333  5568999999999999999999999999865421


Q ss_pred             ccccccCCcccccccccchHHhHhhhcchhhHHHHHHhhhhhhhhhhccccccCCchHHHHHHHHHHHHHHHhhcccchH
Q psy13811        119 MKGAQAGNYSKTSLTTDTLMDLSRVLFYILCVTELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAGKP  198 (297)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~i~~liP~n~f~~l~~~~n~~~~~~~~~~~~~~~n~L~iivFAi~~G~al~~~~~~~~~  198 (297)
                      .   ++ . .++..+..+..+.+.+.+|+|+|+++                + ++|+||+++||+++|+|+.+.+|+   
T Consensus       113 ~---~~-~-~~~~~~~~~~~~~~~~~i~~N~~~al----------------~-~gniL~vIvFai~~GiAl~~~~~~---  167 (402)
T PRK13628        113 S---AA-D-ISPPQGIVEVLKTLLLSLVDNPINAL----------------L-NANYIGILAWAIGLGLALRHASDT---  167 (402)
T ss_pred             c---cc-c-ccCCcchHHHHHHHHHHCcCCHHHHh----------------H-cCCHHHHHHHHHHHHHHHHHhhHH---
Confidence            1   01 1 11111112334455777889999985                4 579999999999999999887644   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHH
Q psy13811        199 LLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILLPAMYTFFVREWPF  278 (297)
Q Consensus       199 l~~~~~~l~~~~~~iv~~Ii~~aPigV~~lia~~i~~~~~~~~l~~~l~~~vl~v~~~~~i~~~vvlpli~~~~~~~nP~  278 (297)
                      ..+++|+++++++|+++|+|+++|+|||+++|+.++++ |.+.+. ++++|++++|+++++|.++++|++++..+|+||+
T Consensus       168 ~~~~~~~~~~~~~kii~~Im~laPiGVfaliA~~v~~~-g~~~l~-~l~~~v~~~~~~~~i~~~vv~~~i~~~~~~~~p~  245 (402)
T PRK13628        168 TKNVVNDLSEAVSQIVKWVIRFAPIGIFGLVASTLAET-GFSALA-GYAQLLAVLVGCMLFVALVVNPLIVFWKIRRNPY  245 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChH
Confidence            66999999999999999999999999999999999884 787665 9999999999999999999999999888999999


Q ss_pred             HH-HHHhHHHHHhhhcccCC
Q psy13811        279 RF-TANMGQAIATAFGTASR  297 (297)
Q Consensus       279 ~f-~~~~~~all~Af~T~SS  297 (297)
                      +| +|+++|++++||+|+||
T Consensus       246 ~~~~k~~~~~~~~AfsT~SS  265 (402)
T PRK13628        246 PLVFTCLRESGVTAFFTRSS  265 (402)
T ss_pred             HHHHHHHHHHHHHHheehhH
Confidence            98 89999999999999998

>COG1823 Predicted Na+/dicarboxylate symporter [General function prediction only]

Probab=100.00  E-value=2.2e-36  Score=280.32  Aligned_cols=244  Identities=19%  Similarity=0.346  Sum_probs=206.0

Q ss_pred             CCccchhhhhhccccHHHHHHHHhhhHHHHHHHHHHHHhhcC-CcccchhhhhHHHHHHHHHHHHHHHHHHHHHhhhCCC
Q psy13811         35 PDAWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSL-DLSLSKRVGFRSIAYYCATTSIAVVEGIILVCTIRPG  113 (297)
Q Consensus        35 ~~~~~~~~~~~i~~~G~lfi~lLkm~VvPLVf~sii~gI~~l-~~~~~grig~~tl~~~l~tt~iA~~iGl~~~~~~~pG  113 (297)
                      +.++..+..+|++.+|+.|+|+|||+|+||||.|+++++.++ +.++.||+..-++++.++||.+|+.+|+..++.|.--
T Consensus        55 ~~~~~~~t~~W~nivgnGYV~LLqMivmPLVfiSIlsAi~kl~~~~~lgKis~l~i~~ll~ttaIAA~iGi~~~~~fgLt  134 (458)
T COG1823          55 DSPVLKETIDWFNIVGNGYVRLLQMIVMPLVFISILSAIAKLDNASKLGKISLLTIGTLLFTTAIAALIGILVALLFGLT  134 (458)
T ss_pred             CchHHHhHhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence            457888999999999999999999999999999999999999 6799999999999999999999999999999988663


Q ss_pred             CCccccccc-c--c-C--CcccccccccchHHhHhhhcchhhHHHHHHhhhhhhhhhhccccccCCchHHHHHHHHHHHH
Q psy13811        114 VGHASMKGA-Q--A-G--NYSKTSLTTDTLMDLSRVLFYILCVTELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMGI  187 (297)
Q Consensus       114 ~~~~~~~~~-~--~-~--~~~~~~~~~~~~~~~i~~liP~n~f~~l~~~~n~~~~~~~~~~~~~~~n~L~iivFAi~~G~  187 (297)
                      . ....++. |  . +  +...+.-...++.+.+.+++|+|+|.++              ..++..+++++++||.+.|+
T Consensus       135 A-~~l~~G~~e~a~~~~i~~~~~~~~~~tipq~ilslIP~NpF~dl--------------TGa~~tSiIaVVIFa~~lGi  199 (458)
T COG1823         135 A-EGLVQGDAETARISEIQTYVGKVADLTIPQLILSLIPKNPFADL--------------TGANPTSIIAVVIFAAFLGI  199 (458)
T ss_pred             H-HHHhhCcHHHHHHHHHHHHhhhhhhcchHHHHHHhcCCCchhHh--------------hcCCccceeehhHHHHHHHH
Confidence            2 1111110 0  0 0  0001111234678889999999999886              11345789999999999999


Q ss_pred             HHHhhc----ccchHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13811        188 AIARIG----KAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFI  263 (297)
Q Consensus       188 al~~~~----~~~~~l~~~~~~l~~~~~~iv~~Ii~~aPigV~~lia~~i~~~~~~~~l~~~l~~~vl~v~~~~~i~~~v  263 (297)
                      |..+..    |++|.+.+++|.+|+++|++++.+++++|+||+++|+...++ .+++++. .+|.|+.+.|.+..+ +|+
T Consensus       200 Aalk~~k~~~~~ge~~~~~I~t~~~ivM~lV~~VirLTPYgV~AlMtkv~at-s~~~~I~-~Lg~FivAsY~Ai~~-MFv  276 (458)
T COG1823         200 AALKLSKKDPEKGERFKAAIDTLQSIVMKLVRLVIRLTPYGVLALMTKVVAT-SNLEDII-KLGSFIVASYIAIFI-MFV  276 (458)
T ss_pred             HHHHhhhhchHhHhHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHhh-ccHHHHH-HHHhHHHHHHHHHHH-HHH
Confidence            998874    456899999999999999999999999999999999987766 5799998 999999999998887 588


Q ss_pred             HHHHHHHHhhcCCHHHHHHHhHHHHHhhhcccCC
Q psy13811        264 LLPAMYTFFVREWPFRFTANMGQAIATAFGTASR  297 (297)
Q Consensus       264 vlpli~~~~~~~nP~~f~~~~~~all~Af~T~SS  297 (297)
                      +..+++ .+.|.||.+|+|+.+|.+.+||.++||
T Consensus       277 vH~iLL-~~~g~NPi~Y~Kkv~PvL~FAFtSRSS  309 (458)
T COG1823         277 VHGILL-ALNGVNPIKYFKKVWPVLTFAFTSRSS  309 (458)
T ss_pred             HHHHHH-HHcCCCHHHHHHHHhHHHhhheecccc
Confidence            888776 468999999999999999999999998

>PRK14695 serine/threonine transporter SstT; Provisional

Probab=99.96  E-value=9.8e-29  Score=231.43  Aligned_cols=176  Identities=20%  Similarity=0.319  Sum_probs=149.0

Q ss_pred             HHHHHHHHHHHHHHhhhCCCCCc-ccccccccCCcccccccccchHHhHhhhcchhhHHHHHHhhhhhhhhhhccccccC
Q psy13811         94 ATTSIAVVEGIILVCTIRPGVGH-ASMKGAQAGNYSKTSLTTDTLMDLSRVLFYILCVTELYFILCVTELWQMRGEWVVG  172 (297)
Q Consensus        94 ~tt~iA~~iGl~~~~~~~pG~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~liP~n~f~~l~~~~n~~~~~~~~~~~~~~  172 (297)
                      .|+++|+...+..+.+++|-.+. ..+.+..     ++ .+..+..+.+.+.+|+|+|+++                + +
T Consensus         2 ~t~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~iv~~~~~N~~~al----------------a-~   58 (319)
T PRK14695          2 IGTFAAALVAVLASFIVPIEITLNSANTEIA-----PP-DGIGQVLSNLLLKLVDSPVNAL----------------L-T   58 (319)
T ss_pred             HHHHHHHHHHHHHHHhCCcchhccccccccC-----CC-CcHHHHHHHHHHHccCCHHHHh----------------H-c
Confidence            68899999999999999998876 2111111     11 2234566666777799999986                4 6


Q ss_pred             CchHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccChHHHHHHHHHHHHH
Q psy13811        173 SNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFIT  252 (297)
Q Consensus       173 ~n~L~iivFAi~~G~al~~~~~~~~~l~~~~~~l~~~~~~iv~~Ii~~aPigV~~lia~~i~~~~~~~~l~~~l~~~vl~  252 (297)
                      +|+||+++||+++|+|+..   ++++..+++|+++++++|+++|+|+++|+|+|+++|+.++++ |.+.+ .++++|+++
T Consensus        59 gn~L~iIvFAil~Gial~~---~~~~~~~~~~~l~~v~~kiv~~Vm~~aPiGVfaliA~~v~~~-G~~~l-~~l~~~v~~  133 (319)
T PRK14695         59 ANYIGILSWAVIFGIAMRE---ASKNSKELLKTIADVTSKIVEWIINLAPFGILGLVFKTISDK-GVGSL-ANYGILLVL  133 (319)
T ss_pred             CCcHHHHHHHHHHHHHHHH---cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHH-HHHHHHHHH
Confidence            8999999999999999974   357888999999999999999999999999999999999884 78766 499999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCHHHHH-HHhHHHHHhhhcccCC
Q psy13811        253 VLLGLLIHGFILLPAMYTFFVREWPFRFT-ANMGQAIATAFGTASR  297 (297)
Q Consensus       253 v~~~~~i~~~vvlpli~~~~~~~nP~~f~-~~~~~all~Af~T~SS  297 (297)
                      +|+++++|.++++|++++..+|+||++|+ |+++|++++||+|+||
T Consensus       134 ~~~~~~i~~~vv~~~~~~~~~~~~p~~f~~~~~~~~~~~AfsT~SS  179 (319)
T PRK14695        134 LVTTMLFVAPVVNPLIAFFFMRRNPYPLVWNCLRVSGVTAFFTRSS  179 (319)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccch
Confidence            99999999999999998888999999996 5588999999999998

>COG3633 SstT Na+/serine symporter [Amino acid transport and metabolism]

Probab=99.86  E-value=2.1e-21  Score=176.20  Aligned_cols=256  Identities=18%  Similarity=0.227  Sum_probs=185.7

Q ss_pred             hhhcccchhhHHHhhhhhhcCCC---ccchhhhhhccccHHHHHHHHhhhHHHHHHHHHHHHhhcCCcccchhhhhHHHH
Q psy13811         14 TVMDGMDEMRVVERRTVLDSMPD---AWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIA   90 (297)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~G~lfi~lLkm~VvPLVf~sii~gI~~l~~~~~grig~~tl~   90 (297)
                      .+.+-.-.-+++.|+-++.....   -.+|+...-.+.+|++|.+.||.+.+-|||.-+..+|++-+.++-.++ +-.+.
T Consensus         6 ~l~~~~~~gsLv~qI~iGlvlGi~~a~~s~~~a~~vgllG~lFv~aLkAvAPvLVf~LV~asIan~k~gqkt~i-r~Iiv   84 (407)
T COG3633           6 KLFRLLARGSLVKQILIGLVLGILLAIISPPAAEAVGLLGTLFVGALKAVAPVLVFILVMASIANHKKGQKTNI-RPIIV   84 (407)
T ss_pred             HHHHHHHhccHHHHHHHHHHHHHHHHhcChhHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccc-ceeeh
Confidence            34444555667777766554332   357778888899999999999999999999999999999854433444 45567


Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCCcccccccccchHHhHhhhcchhhHHHHHHhhhhhhhhhhccccc
Q psy13811         91 YYCATTSIAVVEGIILVCTIRPGVGHASMKGAQAGNYSKTSLTTDTLMDLSRVLFYILCVTELYFILCVTELWQMRGEWV  170 (297)
Q Consensus        91 ~~l~tt~iA~~iGl~~~~~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~liP~n~f~~l~~~~n~~~~~~~~~~~~  170 (297)
                      .|+.-|+.|+....+.+..|+.-....  .  ++    .+.+......|.+.+++=+ ..      .||++++      .
T Consensus        85 LYl~GTF~Aal~AVia~f~FP~~lvL~--~--~~----~~~spP~gi~eVl~~Ll~~-~V------dNPinAl------~  143 (407)
T COG3633          85 LYLLGTFSAALVAVIASFAFPSTLVLA--S--SA----GDISPPSGIVEVLKSLLMS-LV------DNPINAL------L  143 (407)
T ss_pred             HHHHHHHHHHHHHHHHhhcCceeEEEe--c--cC----CCCCCCccHHHHHHHHHHH-Hh------cCHHHHH------h
Confidence            788888989888888777765433221  1  11    1111223444544443321 11      1565553      3


Q ss_pred             cCCchHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccChHHHHHHHHHHH
Q psy13811        171 VGSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYF  250 (297)
Q Consensus       171 ~~~n~L~iivFAi~~G~al~~~~~~~~~l~~~~~~l~~~~~~iv~~Ii~~aPigV~~lia~~i~~~~~~~~l~~~l~~~v  250 (297)
                       +.|.++++.+|+-+|+|+.+-.|.   -.+.++.++|...++++||++++|+|+|++.+.++++. |.+.+. .+.+++
T Consensus       144 -~aNyiGiLaWaiglG~Alrh~s~~---tk~~~~d~~e~vs~iV~~iI~fAP~GIfgLVasT~a~t-G~~aL~-gYa~LL  217 (407)
T COG3633         144 -NANYIGILAWAIGLGLALRHASDT---TKNLVNDLSEAVSKIVKVVIRFAPIGIFGLVASTLAET-GFGALW-GYAQLL  217 (407)
T ss_pred             -cCCchhhhHHHHHHhHHHHhccHh---HHHHHHHHHHHHHHHHheeeeccCchhhHHHHHHHHhh-hHHHHH-HHHHHH
Confidence             579999999999999999866544   45567888999999999999999999999999999884 676655 677765


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCHHHH-HHHhHHHHHhhhcccCC
Q psy13811        251 ITVLLGLLIHGFILLPAMYTFFVREWPFRF-TANMGQAIATAFGTASR  297 (297)
Q Consensus       251 l~v~~~~~i~~~vvlpli~~~~~~~nP~~f-~~~~~~all~Af~T~SS  297 (297)
                      .+..-.++...+++-|++.++-.|+||++. +...++.-.+||.|+||
T Consensus       218 ~vLvg~Mlfva~VVNpliv~~kiRrNPyPLV~~ClReSg~tAFFTRSS  265 (407)
T COG3633         218 AVLVGCMLFVALVVNPLIVYWKIRRNPYPLVLTCLRESGVTAFFTRSS  265 (407)
T ss_pred             HHHHHHHHHHHHHhccceEEEEecCCCcchhHHHhhhcCeEEEEeccc
Confidence            544444555688999999988889999986 66667899999999998

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	297
2nwl_A	422	Crystal Structure Of Gltph In Complex With L-Asp Le		1e-12
1xfh_A	422	Structure Of Glutamate Transporter Homolog From Pyr		1e-12
3v8f_A	422	Crystal Structure Of Crosslinked Gltph V216c-M385c		2e-12
3v8g_A	422	Crystal Structure Of An Asymmetric Trimer Of A Glut		2e-12
3kbc_A	425	Crystal Structure Of Gltph K55c-A364c Mutant Crossl		2e-11

>pdb|2NWL|A Chain A, Crystal Structure Of Gltph In Complex With L-Asp Length = 422

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 38  WSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATTS 97
           ++     YV+  G+LF+++LK L++P++ +S+V    S+  +   RVG + + YY  T++
Sbjct: 35  YAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSA 94
Query: 98  IAVVEGIILVCTIRPGVG-HASMKGAQAGNYSKXXXXXXXXXXXXRVLFYILCVTELYFI 156
            AV  GII+     PG G H ++ G Q                     F       L  I
Sbjct: 95  FAVTLGIIMARLFNPGAGIHLAVGGQQ---------------------FQPHQAPPLVHI 133
Query: 157 LCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIA--------RIGKAGKPLLSVFESLSE 208
           L         G    G  VL  +FF+I +GIAI         ++ K+ + LL     L+E
Sbjct: 134 LLDIVPTNPFGALANG-QVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAE 192
Query: 209 VVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQL 246
            +  I   V+  +P G+F L+A  + +     H VG+L
Sbjct: 193 AMYKIVNGVMQYAPIGVFALIAYVMAEQG--VHVVGEL 228

>pdb|1XFH|A Chain A, Structure Of Glutamate Transporter Homolog From Pyrococcus Horikoshii Length = 422

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 33/219 (15%)
Query: 37  AWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATT 96
            ++     YV+  G+LF+++LK L++P++ +S+V    S+  +   RVG + + YY  T+
Sbjct: 34  GYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTS 93
Query: 97  SIAVVEGIILVCTIRPGVG-HASMKGAQAGNYSKXXXXXXXXXXXXRVLFYILCVTELYF 155
           + AV  GII+     PG G H ++ G Q                     F       L  
Sbjct: 94  AFAVTLGIIMARLFNPGAGIHLAVGGQQ---------------------FQPHQAPPLVH 132
Query: 156 ILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIA--------RIGKAGKPLLSVFESLS 207
           IL         G    G  VL  +FF+I +GIAI         ++ K+ + LL     L+
Sbjct: 133 ILLDIVPTNPFGALANG-QVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLA 191
Query: 208 EVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQL 246
           E +  I   V+  +P G+F L+A  + +     H VG+L
Sbjct: 192 EAMYKIVNGVMQYAPIGVFALIAYVMAEQG--VHVVGEL 228

>pdb|3V8F|A Chain A, Crystal Structure Of Crosslinked Gltph V216c-M385c Mutant Length = 422

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 33/219 (15%)
Query: 37  AWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATT 96
            ++     YV+  G+LF+++LK L++P++ +S+V    S+  +   RVG + + YY  T+
Sbjct: 34  GYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTS 93
Query: 97  SIAVVEGIILVCTIRPGVG-HASMKGAQAGNYSKXXXXXXXXXXXXRVLFYILCVTELYF 155
           + AV  GII+     PG G H ++ G Q                     F       L  
Sbjct: 94  AFAVTLGIIMARLFNPGAGIHLAVGGQQ---------------------FQPHQAPPLVH 132
Query: 156 ILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIA--------RIGKAGKPLLSVFESLS 207
           IL         G    G  VL  +FF+I +GIAI         ++ K+ + LL     L+
Sbjct: 133 ILLDIVPTNPFGALANG-QVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLA 191
Query: 208 EVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQL 246
           E +  I   V+  +P G+F L+A  + +     H VG+L
Sbjct: 192 EAMYKIVNGVMQYAPIGVFALIAYCMAEQG--VHVVGEL 228

>pdb|3V8G|A Chain A, Crystal Structure Of An Asymmetric Trimer Of A Glutamate Transporter Homologue (Gltph) Length = 422

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 33/219 (15%)
Query: 37  AWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATT 96
            ++     YV+  G+LF+++LK L++P++ +S+V    S+  +   RVG + + YY  T+
Sbjct: 34  GYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTS 93
Query: 97  SIAVVEGIILVCTIRPGVG-HASMKGAQAGNYSKXXXXXXXXXXXXRVLFYILCVTELYF 155
           + AV  GII+     PG G H ++ G Q                     F       L  
Sbjct: 94  AFAVTLGIIMARLFNPGAGIHLAVGGQQ---------------------FQPHQAPPLVH 132
Query: 156 ILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIA--------RIGKAGKPLLSVFESLS 207
           IL         G    G  VL  +FF+I +GIAI         ++ K+ + LL     L+
Sbjct: 133 ILLDIVPTNPFGALANG-QVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLA 191
Query: 208 EVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQL 246
           E +  I   V+  +P G+F L+A  + +     H VG+L
Sbjct: 192 EAMYKICNGVMQYAPIGVFALIAYVMAEQG--VHVVGEL 228

>pdb|3KBC|A Chain A, Crystal Structure Of Gltph K55c-A364c Mutant Crosslinked With Divalent Mercury Length = 425

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 33/219 (15%)
Query: 37  AWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATT 96
            ++     YV+  G+LF+++L  L++P++ +S+V    S+  +   RVG + + YY  T+
Sbjct: 34  GYAHAVHTYVKPFGDLFVRLLCMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTS 93
Query: 97  SIAVVEGIILVCTIRPGVG-HASMKGAQAGNYSKXXXXXXXXXXXXRVLFYILCVTELYF 155
           + AV  GII+     PG G H ++ G Q                     F       L  
Sbjct: 94  AFAVTLGIIMARLFNPGAGIHLAVGGQQ---------------------FQPHQAPPLVH 132
Query: 156 ILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIA--------RIGKAGKPLLSVFESLS 207
           IL         G    G  VL  +FF+I +GIAI         ++ K+ + LL     L+
Sbjct: 133 ILLDIVPTNPFGALANG-QVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLA 191
Query: 208 EVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQL 246
           E +  I   V+  +P G+F L+A  + +     H VG+L
Sbjct: 192 EAMYKIVNGVMQYAPIGVFALIAYVMAEQG--VHVVGEL 228

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	297
2nwl_A	422	GLTPH, glutamate symport protein; alpha helical, m	2e-39

>2nwl_A GLTPH, glutamate symport protein; alpha helical, membrane protein, helical hairpin, unwound RE transport protein; HET: PLM; 2.96A {Pyrococcus horikoshii} PDB: 2nww_A* 1xfh_A* 2nwx_A* 3v8g_A 3v8f_A 3kbc_A Length = 422

 Score =  141 bits (358), Expect = 2e-39
 Identities = 68/273 (24%), Positives = 119/273 (43%), Gaps = 38/273 (13%)

Query: 35  PDAWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCA 94
              ++     YV+  G+LF+++LK L++P++ +S+V    S+  +   RVG + + YY  
Sbjct: 32  HYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLL 91

Query: 95  TTSIAVVEGIILVCTIRPGVG-HASMKGAQAGNYSKTSLTTDTLMDL--SRVLFYILCVT 151
           T++ AV  GII+     PG G H ++ G Q   +    L    L+D+  +          
Sbjct: 92  TSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLV-HILLDIVPTNPF------- 143

Query: 152 ELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIA--------RIGKAGKPLLSVF 203
                             +    VL  +FF+I +GIAI         ++ K+ + LL   
Sbjct: 144 ----------------GALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAI 187

Query: 204 ESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFI 263
             L+E +  I   V+  +P G+F L+A  + +     H VG+L      V +GL +   +
Sbjct: 188 NGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQG--VHVVGELAKVTAAVYVGLTLQILL 245

Query: 264 LLPAMYTFFVREWPFRFTANMGQAIATAFGTAS 296
           +   +   +    P  F  +   A+ TAF T S
Sbjct: 246 VYFVLLKIY-GIDPISFIKHAKDAMLTAFVTRS 277

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	297
2nwl_A	422	GLTPH, glutamate symport protein; alpha helical, m	100.0

>2nwl_A GLTPH, glutamate symport protein; alpha helical, membrane protein, helical hairpin, unwound RE transport protein; HET: PLM; 2.96A {Pyrococcus horikoshii} PDB: 2nww_A* 1xfh_A* 2nwx_A* 3v8g_A 3v8f_A 3kbc_A

Probab=100.00  E-value=2.2e-47  Score=369.29  Aligned_cols=231  Identities=27%  Similarity=0.413  Sum_probs=206.8

Q ss_pred             hhhccccHHHHHHHHhhhHHHHHHHHHHHHhhcCCcccchhhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCCCccccccc
Q psy13811         43 RMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATTSIAVVEGIILVCTIRPGVGHASMKGA  122 (297)
Q Consensus        43 ~~~i~~~G~lfi~lLkm~VvPLVf~sii~gI~~l~~~~~grig~~tl~~~l~tt~iA~~iGl~~~~~~~pG~~~~~~~~~  122 (297)
                      ..|++++||+|+|++||+++|+||+|++.|+++++.+++||+++|++.||+.+|++|+.+|+.++++++||.+.+.+.. 
T Consensus        40 ~~~~~~~G~lFi~llkmiv~PLVf~siv~gia~l~~~~~gri~~~ti~~~~~tt~iA~~igl~~~~~~~pg~g~~~~~~-  118 (422)
T 2nwl_A           40 HTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVG-  118 (422)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSCCCCCC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccccc-
Confidence            4689999999999999999999999999999999878899999999999999999999999999999999987643211 


Q ss_pred             ccCCcccccccccchHHhHhhhcchhhHHHHHHhhhhhhhhhhccccccCCchHHHHHHHHHHHHHHHhhc--------c
Q psy13811        123 QAGNYSKTSLTTDTLMDLSRVLFYILCVTELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIG--------K  194 (297)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~i~~liP~n~f~~l~~~~n~~~~~~~~~~~~~~~n~L~iivFAi~~G~al~~~~--------~  194 (297)
                       +  +.++..+.+++.|++.+++|+|+++++                + ++|+||+++||+++|+++.+.+        |
T Consensus       119 -~--~~~~~~~~~~~~~~l~~~iP~N~~~a~----------------a-~~~~L~vivfai~~Gial~~~~~~~~~~~~~  178 (422)
T 2nwl_A          119 -G--QQFQPHQAPPLVHILLDIVPTNPFGAL----------------A-NGQVLPTIFFAIILGIAITYLMNSENEKVRK  178 (422)
T ss_dssp             -C--CCC-----CCTHHHHGGGSCSCHHHHH----------------H-TCCHHHHHHHHHHHHHHHHHHHTCSCHHHHH
T ss_pred             -c--cccccccCCcHHHHHHHHHhhChHHHH----------------h-hhchHHHHHHHHHHHHHHHHcccccccccch
Confidence             0  111122345789999999999999985                4 6899999999999999999987        6


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy13811        195 AGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILLPAMYTFFVR  274 (297)
Q Consensus       195 ~~~~l~~~~~~l~~~~~~iv~~Ii~~aPigV~~lia~~i~~~~~~~~l~~~l~~~vl~v~~~~~i~~~vvlpli~~~~~~  274 (297)
                      |++++.+++|+++++++|+++|||+++|+|||+++|+.+++ .|.+.+. ++++|++++|+++++|.+++||++++ ++|
T Consensus       179 ~~~~~~~~~~~~~~v~~kiv~~im~laPigvf~lia~~~~~-~g~~~l~-~l~~~i~~~~~~~~i~~~vv~~~~~~-~~~  255 (422)
T 2nwl_A          179 SAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAE-QGVHVVG-ELAKVTAAVYVGLTLQILLVYFVLLK-IYG  255 (422)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHTT-TGGGCCT-HHHHHHHHHHHHHHHHHHHTHHHHHH-HTT
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHC
Confidence            78999999999999999999999999999999999999887 4676554 99999999999999999999999998 889


Q ss_pred             CCHHHHHHHhHHHHHhhhcccCC
Q psy13811        275 EWPFRFTANMGQAIATAFGTASR  297 (297)
Q Consensus       275 ~nP~~f~~~~~~all~Af~T~SS  297 (297)
                      +||++|+|+++|++++||+|+||
T Consensus       256 ~np~~~~k~~~~a~~~Af~T~SS  278 (422)
T 2nwl_A          256 IDPISFIKHAKDAMLTAFVTRSS  278 (422)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHCCH
T ss_pred             CCHHHHHHHHHHHHHHHHHhccH
Confidence            99999999999999999999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	297
d2nwwa1	405	f.49.1.1 (A:12-416) Proton glutamate symport prote	1e-19

>d2nwwa1 f.49.1.1 (A:12-416) Proton glutamate symport protein {Pyrococcus horikoshii [TaxId: 53953]} Length = 405

class: Membrane and cell surface proteins and peptides
fold: Proton glutamate symport protein
superfamily: Proton glutamate symport protein
family: Proton glutamate symport protein
domain: Proton glutamate symport protein
species: Pyrococcus horikoshii [TaxId: 53953]

 Score = 85.9 bits (212), Expect = 1e-19
 Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 16/260 (6%)

Query: 37  AWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATT 96
            ++     YV+  G+LF+++LK L++P++ +S+V    S+  +   RVG + + YY  T+
Sbjct: 23  GYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTS 82

Query: 97  SIAVVEGIILVCTIRPGVGHASMKGAQAGNYSKTSLTTDTLMDLSRVLFYILCVTELYFI 156
           + AV  GII+     PG G     G Q     +       L+D+                
Sbjct: 83  AFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNP----------- 131

Query: 157 LCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGKAGKPLLSVFESLSEVVMTITTW 216
                L   +    +   ++  +  +  M     ++ K+ + LL     L+E +  I   
Sbjct: 132 --FGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNG 189

Query: 217 VIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILLPAMYTFFVREW 276
           V+  +P G+F L+A   +  +   H VG+L      V +GL +   ++   +   +  + 
Sbjct: 190 VMQYAPIGVFALIA--YVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGID- 246

Query: 277 PFRFTANMGQAIATAFGTAS 296
           P  F  +   A+ TAF T S
Sbjct: 247 PISFIKHAKDAMLTAFVTRS 266

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	297
d2nwwa1	405	Proton glutamate symport protein {Pyrococcus horik	100.0

>d2nwwa1 f.49.1.1 (A:12-416) Proton glutamate symport protein {Pyrococcus horikoshii [TaxId: 53953]}

class: Membrane and cell surface proteins and peptides
fold: Proton glutamate symport protein
superfamily: Proton glutamate symport protein
family: Proton glutamate symport protein
domain: Proton glutamate symport protein
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=1.4e-43  Score=339.29  Aligned_cols=237  Identities=26%  Similarity=0.415  Sum_probs=209.2

Q ss_pred             ccchhhhhhccccHHHHHHHHhhhHHHHHHHHHHHHhhcCCcccchhhhhHHHHHHHHHHHHHHHHHHHHHhhhCCCCCc
Q psy13811         37 AWSERERMYVQFPGELFLKMLKCLIVPLLVSSIVSAIGSLDLSLSKRVGFRSIAYYCATTSIAVVEGIILVCTIRPGVGH  116 (297)
Q Consensus        37 ~~~~~~~~~i~~~G~lfi~lLkm~VvPLVf~sii~gI~~l~~~~~grig~~tl~~~l~tt~iA~~iGl~~~~~~~pG~~~  116 (297)
                      ++++....|++++||+|+|++||+++|+||+|++.|++++++++.||++.|++.||+.||++|+.+|+.+++.++||.+.
T Consensus        23 ~~~~~~~~~l~~~g~lFi~lL~m~v~PLIf~sii~gi~~L~~~~~gkl~~~ti~~~l~tt~iA~~igl~~~~~~~pg~~~  102 (405)
T d2nwwa1          23 GYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGI  102 (405)
T ss_dssp             TTHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTTCSCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCC
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            45667788999999999999999999999999999999996688999999999999999999999999999999999976


Q ss_pred             ccccccccCCcccccccccchHHhHhhhcchhhHHHHHHhhhhhhhhhhccccccCCchHHHHHHHHHHHHHHHhhcc--
Q psy13811        117 ASMKGAQAGNYSKTSLTTDTLMDLSRVLFYILCVTELYFILCVTELWQMRGEWVVGSNVLGLVFFSIAMGIAIARIGK--  194 (297)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~i~~liP~n~f~~l~~~~n~~~~~~~~~~~~~~~n~L~iivFAi~~G~al~~~~~--  194 (297)
                      +...+    ++..+..+..+..|.+.+++|+|+|+++                + ++|++++++||+++|+|+...++  
T Consensus       103 ~~~~~----~~~~~~~~~~~~~~~l~~~iP~Ni~~al----------------~-~~~~l~vi~fail~Gial~~~~~~~  161 (405)
T d2nwwa1         103 HLAVG----GQQFQPHQAPPLVHILLDIVPTNPFGAL----------------A-NGQVLPTIFFAIILGIAITYLMNSE  161 (405)
T ss_dssp             CCCCC----CCCCCCCCCCCHHHHHGGGSCSCHHHHH----------------H-SCCHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             cchhh----hccccccccchHHHHHHHhccCCHHHHh----------------h-cCCccchhhHHHHHHHHHHHhcccc
Confidence            53221    1112223456788999999999999986                4 68999999999999999987642  


Q ss_pred             ------cchHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13811        195 ------AGKPLLSVFESLSEVVMTITTWVIWISPFGIFFLVAEKIIDMKSLSHTVGQLGLYFITVLLGLLIHGFILLPAM  268 (297)
Q Consensus       195 ------~~~~l~~~~~~l~~~~~~iv~~Ii~~aPigV~~lia~~i~~~~~~~~l~~~l~~~vl~v~~~~~i~~~vvlpli  268 (297)
                            +++++.+++|+++++++|+++|+|+++|+|+|+++++.+++. |.+.+ .++++|++++++++.+|.++.+|++
T Consensus       162 ~~~~~~~~~~l~~~~~~l~~v~~kii~~im~laPigvf~l~a~~~~~~-g~~~l-~~l~~~~~~~~~~~~l~~~~~~~i~  239 (405)
T d2nwwa1         162 NEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQ-GVHVV-GELAKVTAAVYVGLTLQILLVYFVL  239 (405)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHT-GGGCC-THHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhhh-hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  246899999999999999999999999999999999988774 56655 4999999999999999999999988


Q ss_pred             HHHhhcCCHHHHHHHhHHHHHhhhcccCC
Q psy13811        269 YTFFVREWPFRFTANMGQAIATAFGTASR  297 (297)
Q Consensus       269 ~~~~~~~nP~~f~~~~~~all~Af~T~SS  297 (297)
                      .+ ++|+||++|+|+++|++++||+|+||
T Consensus       240 ~~-~~~~~p~~~~~~~~~~~~~Af~T~SS  267 (405)
T d2nwwa1         240 LK-IYGIDPISFIKHAKDAMLTAFVTRSS  267 (405)
T ss_dssp             HH-TTTCCHHHHHHHHHHHHHHHHHHCCT
T ss_pred             HH-HcCCChHHHhhhccchhheeeecccc
Confidence            75 67999999999999999999999998