Psyllid ID: psy1381

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100--
Protein Sequence
MLSENPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSPGKS
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHccccccHHHHHcccccccccHHHHHHHHHHccccEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHHccccccHHHHHHHcccccccHHHHHHHHHHcccEEEEEEccccccccccccccccccccccccccccEEEEEEEEEEcccccccc
Coil and Loop (DISEMBL)
mlsenpnstvTKFMernykpgftyqdfAKDFtaeffdanhWADILASSGAKYVVLTSkhhegytlwpskyafswnsmdigpkrdlvdytfgnwftggspgks
Flexible Loop (DISEMBL)
mlsenpnstvTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGnwftggspgks
Low Complexity Region (SEG)
MLSENPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSPGKS
Disordered region (IsUnstruct)
************FMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFT*******
Disordered Region (DISOPRED)
***********KFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWF*GGS****
Disordered Region (DISEMBL)
*********VTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSPGKS
Disordered Region (DISPRO)
MLSENPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFT*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLSENPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSPGKS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	102	2.2.26 [Sep-21-2011]
Q9VTJ4	494	Putative alpha-L-fucosida	yes	N/A	0.784	0.161	0.65	7e-27
P49713	482	Putative alpha-L-fucosida	yes	N/A	0.803	0.170	0.621	1e-26
C3YWU0	449	Alpha-L-fucosidase OS=Bra	yes	N/A	0.754	0.171	0.649	2e-24
Q9BTY2	467	Plasma alpha-L-fucosidase	yes	N/A	0.745	0.162	0.631	3e-24
Q6AYS4	459	Plasma alpha-L-fucosidase	yes	N/A	0.725	0.161	0.648	6e-24
Q5RFI5	465	Plasma alpha-L-fucosidase	yes	N/A	0.745	0.163	0.618	1e-23
P17164	462	Tissue alpha-L-fucosidase	no	N/A	0.784	0.173	0.587	2e-23
Q99KR8	461	Plasma alpha-L-fucosidase	yes	N/A	0.725	0.160	0.635	5e-23
Q99LJ1	452	Tissue alpha-L-fucosidase	no	N/A	0.735	0.165	0.6	1e-22
P04066	466	Tissue alpha-L-fucosidase	no	N/A	0.735	0.160	0.6	3e-22

>sp|Q9VTJ4|FUCO_DROME Putative alpha-L-fucosidase OS=Drosophila melanogaster GN=Fuca PE=2 SV=2

 Score =  119 bits (297), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 52/80 (65%), Positives = 64/80 (80%)

Query: 7   NSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLW 66
           N    +FM+RNYKP FTYQ+FA  FTAE F+A  WA +   SGA+YVVLTSKHH+G+TLW
Sbjct: 83  NPEYVQFMQRNYKPDFTYQEFASQFTAELFNATKWALLFKDSGARYVVLTSKHHDGFTLW 142

Query: 67  PSKYAFSWNSMDIGPKRDLV 86
           PSK ++ WNSMD+GPKRD+V
Sbjct: 143 PSKNSYGWNSMDVGPKRDIV 162

Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 5EC: 1

>sp|P49713|FUCO_CAEEL Putative alpha-L-fucosidase OS=Caenorhabditis elegans GN=W03G11.3 PE=3 SV=2

 Score =  118 bits (296), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 51/82 (62%), Positives = 69/82 (84%)

Query: 5   NPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYT 64
            P+  V  F+++NYKPG TY DFAKDFTAE+F+AN +A+ + +SGA+Y V TSKHHEG+T
Sbjct: 66  QPDKDVVNFVDKNYKPGTTYADFAKDFTAEYFNANQFAETVKTSGARYFVFTSKHHEGFT 125

Query: 65  LWPSKYAFSWNSMDIGPKRDLV 86
           +WPS+ +++WNSMDIGPKRD+V
Sbjct: 126 MWPSRTSWNWNSMDIGPKRDIV 147

Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.

Caenorhabditis elegans (taxid: 6239)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

EC: 1

>sp|C3YWU0|FUCO_BRAFL Alpha-L-fucosidase OS=Branchiostoma floridae GN=BRAFLDRAFT_56888 PE=3 SV=2

 Score =  111 bits (277), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 50/77 (64%), Positives = 63/77 (81%)

Query: 10  VTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSK 69
           +  FM+RNY PGF Y DFA  FTAE+++   WA++L +SGAKYVVLTSKHHEG+T WPSK
Sbjct: 71  IKDFMKRNYPPGFRYADFAPMFTAEWYNPLQWAEVLQASGAKYVVLTSKHHEGFTNWPSK 130

Query: 70  YAFSWNSMDIGPKRDLV 86
           Y+++WNS+D GP RDLV
Sbjct: 131 YSWNWNSVDNGPHRDLV 147

Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.

Branchiostoma floridae (taxid: 7739)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

EC: 1

>sp|Q9BTY2|FUCO2_HUMAN Plasma alpha-L-fucosidase OS=Homo sapiens GN=FUCA2 PE=1 SV=2

 Score =  110 bits (274), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 48/76 (63%), Positives = 63/76 (82%)

Query: 11  TKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKY 70
            +FM+ NY P F Y+DF   FTA+FF+AN WADI  +SGAKY+VLTSKHHEG+TLW S+Y
Sbjct: 87  VEFMKDNYPPSFKYEDFGPLFTAKFFNANQWADIFQASGAKYIVLTSKHHEGFTLWGSEY 146

Query: 71  AFSWNSMDIGPKRDLV 86
           +++WN++D GPKRD+V
Sbjct: 147 SWNWNAIDEGPKRDIV 162

Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

EC: 1

>sp|Q6AYS4|FUCO2_RAT Plasma alpha-L-fucosidase OS=Rattus norvegicus GN=Fuca2 PE=2 SV=1

 Score =  109 bits (272), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 48/74 (64%), Positives = 63/74 (85%)

Query: 13  FMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAF 72
           FM+ NY PGF Y+DF   FTA++F+AN WAD+L +SGAKYVVLTSKHHEG+TLW S +++
Sbjct: 81  FMDNNYPPGFKYEDFGVLFTAKYFNANQWADLLQASGAKYVVLTSKHHEGFTLWGSAHSW 140

Query: 73  SWNSMDIGPKRDLV 86
           +WN++D GPKRD+V
Sbjct: 141 NWNAVDEGPKRDIV 154

Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

EC: 1

>sp|Q5RFI5|FUCO2_PONAB Plasma alpha-L-fucosidase OS=Pongo abelii GN=FUCA2 PE=2 SV=1

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 47/76 (61%), Positives = 63/76 (82%)

Query: 11  TKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKY 70
            +FM+ NY P F Y+DF   FTA+FF+AN WADI  +SGAKY+VLTSKHH+G+TLW S+Y
Sbjct: 85  VEFMKDNYPPSFKYEDFGPLFTAKFFNANQWADIFQASGAKYIVLTSKHHKGFTLWGSEY 144

Query: 71  AFSWNSMDIGPKRDLV 86
           +++WN++D GPKRD+V
Sbjct: 145 SWNWNAIDEGPKRDIV 160

Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.

Pongo abelii (taxid: 9601)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

EC: 1

>sp|P17164|FUCO_RAT Tissue alpha-L-fucosidase OS=Rattus norvegicus GN=Fuca1 PE=1 SV=1

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 47/80 (58%), Positives = 60/80 (75%)

Query: 7   NSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLW 66
           +S   +FM+ NY PGF+Y DFA  FTA FF    WAD+  ++GAKYVVLT+KHHEG+T W
Sbjct: 82  SSAYVRFMKENYPPGFSYADFAPQFTARFFHPEEWADLFQAAGAKYVVLTAKHHEGFTNW 141

Query: 67  PSKYAFSWNSMDIGPKRDLV 86
           PS  +++WNS D+GP RDLV
Sbjct: 142 PSAVSWNWNSKDVGPHRDLV 161

Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

EC: 1

>sp|Q99KR8|FUCO2_MOUSE Plasma alpha-L-fucosidase OS=Mus musculus GN=Fuca2 PE=2 SV=1

 Score =  106 bits (264), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 47/74 (63%), Positives = 60/74 (81%)

Query: 13  FMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAF 72
           FM  NY PGF Y+DF   FTA++F+AN WADIL +SGAKYVV TSKHHEG+T+W S  ++
Sbjct: 83  FMNNNYAPGFKYEDFVVLFTAKYFNANQWADILQASGAKYVVFTSKHHEGFTMWGSDRSW 142

Query: 73  SWNSMDIGPKRDLV 86
           +WN++D GPKRD+V
Sbjct: 143 NWNAVDEGPKRDIV 156

Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

EC: 1

>sp|Q99LJ1|FUCO_MOUSE Tissue alpha-L-fucosidase OS=Mus musculus GN=Fuca1 PE=2 SV=1

 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 45/75 (60%), Positives = 58/75 (77%)

Query: 12  KFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYA 71
           +FM  NY PGF+Y DFA  FTA FF  + WA++  ++GAKYVVLT+KHHEG+T WPS  +
Sbjct: 77  RFMTENYPPGFSYADFAPQFTARFFHPDQWAELFQAAGAKYVVLTTKHHEGFTNWPSPVS 136

Query: 72  FSWNSMDIGPKRDLV 86
           ++WNS D+GP RDLV
Sbjct: 137 WNWNSKDVGPHRDLV 151

Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

EC: 1

>sp|P04066|FUCO_HUMAN Tissue alpha-L-fucosidase OS=Homo sapiens GN=FUCA1 PE=1 SV=4

 Score =  103 bits (258), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 45/75 (60%), Positives = 56/75 (74%)

Query: 12  KFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYA 71
           +FM  NY PGF+Y DF   FTA FF    WAD+  ++GAKYVVLT+KHHEG+T WPS  +
Sbjct: 91  RFMRDNYPPGFSYADFGPQFTARFFHPEEWADLFQAAGAKYVVLTTKHHEGFTNWPSPVS 150

Query: 72  FSWNSMDIGPKRDLV 86
           ++WNS D+GP RDLV
Sbjct: 151 WNWNSKDVGPHRDLV 165

Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
156555352	477	PREDICTED: alpha-L-fucosidase-like [Naso	0.784	0.167	0.737	9e-30
321469420	450	hypothetical protein DAPPUDRAFT_318578 [	0.745	0.168	0.763	3e-29
307095200	270	alpha-L-fucosidase [Triatoma matogrossen	0.823	0.311	0.666	5e-29
443716931	474	hypothetical protein CAPTEDRAFT_173285 [	0.803	0.172	0.658	2e-28
321464632	454	hypothetical protein DAPPUDRAFT_55824 [D	0.784	0.176	0.737	2e-28
332024348	468	Plasma alpha-L-fucosidase [Acromyrmex ec	0.764	0.166	0.705	3e-28
307187599	430	Plasma alpha-L-fucosidase [Camponotus fl	0.735	0.174	0.72	3e-28
156544592	453	PREDICTED: alpha-L-fucosidase-like [Naso	0.754	0.169	0.727	3e-28
390350281	460	PREDICTED: alpha-L-fucosidase-like [Stro	0.784	0.173	0.725	4e-28
312380954	489	hypothetical protein AND_06825 [Anophele	0.745	0.155	0.723	8e-28

>gi|156555352|ref|XP_001604815.1| PREDICTED: alpha-L-fucosidase-like [Nasonia vitripennis]

 Score =  134 bits (336), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 59/80 (73%), Positives = 71/80 (88%)

Query: 7   NSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLW 66
           + ++ +FM+ NYKPGFTYQ+FAKDFTAEFF+A  W+ +  +SGAKY+VLTSKHHEGYTLW
Sbjct: 97  SKSIRQFMKDNYKPGFTYQEFAKDFTAEFFNATEWSKLFEASGAKYIVLTSKHHEGYTLW 156

Query: 67  PSKYAFSWNSMDIGPKRDLV 86
           PSKY+FSWNSMDIGP RDLV
Sbjct: 157 PSKYSFSWNSMDIGPHRDLV 176

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321469420|gb|EFX80400.1| hypothetical protein DAPPUDRAFT_318578 [Daphnia pulex]

 Score =  132 bits (332), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 58/76 (76%), Positives = 69/76 (90%)

Query: 11  TKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKY 70
            +FME+NY PGFTY +FA+ F AEFFD NHWA+IL SSGAKYVVLTSKHHEG+TLWPSKY
Sbjct: 73  VEFMEKNYPPGFTYANFAQQFRAEFFDPNHWAEILKSSGAKYVVLTSKHHEGFTLWPSKY 132

Query: 71  AFSWNSMDIGPKRDLV 86
           +++WN+MD+GPKRDLV
Sbjct: 133 SWNWNAMDVGPKRDLV 148

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307095200|gb|ADN29906.1| alpha-L-fucosidase [Triatoma matogrossensis]

 Score =  131 bits (329), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 56/84 (66%), Positives = 73/84 (86%)

Query: 3   SENPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEG 62
           S++    + +FM++NYKPG++YQDFAKDFTAEF++A  WA+I+  SGAKYVVLTSKHHEG
Sbjct: 86  SKSQQILINRFMKKNYKPGYSYQDFAKDFTAEFYNATEWAEIIKKSGAKYVVLTSKHHEG 145

Query: 63  YTLWPSKYAFSWNSMDIGPKRDLV 86
           + LWPSKY++SWNSMDIGP RD++
Sbjct: 146 FALWPSKYSYSWNSMDIGPHRDII 169

Source: Triatoma matogrossensis

Species: Triatoma matogrossensis

Genus: Triatoma

Family: Reduviidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|443716931|gb|ELU08224.1| hypothetical protein CAPTEDRAFT_173285 [Capitella teleta]

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 54/82 (65%), Positives = 72/82 (87%)

Query: 5   NPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYT 64
           N   +  +FM++NY+PGF YQDF +DFTAEFFD +HWAD+LASSGA+YVVLTSKHHEG+T
Sbjct: 87  NSIQSSLEFMQKNYRPGFQYQDFVRDFTAEFFDPDHWADVLASSGARYVVLTSKHHEGFT 146

Query: 65  LWPSKYAFSWNSMDIGPKRDLV 86
           LWPSK +++WN++D+GP R+L+
Sbjct: 147 LWPSKRSWNWNALDVGPHRNLL 168

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|321464632|gb|EFX75639.1| hypothetical protein DAPPUDRAFT_55824 [Daphnia pulex]

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 59/80 (73%), Positives = 66/80 (82%)

Query: 7   NSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLW 66
           N     FM+RNY PGFTY DF   FTAEFF+   WA+IL SSGAKYVVLTSKHHEGYTLW
Sbjct: 67  NPKYVDFMKRNYPPGFTYPDFGPMFTAEFFEPQQWAEILKSSGAKYVVLTSKHHEGYTLW 126

Query: 67  PSKYAFSWNSMDIGPKRDLV 86
           PSKY+F+WN+MD+GPKRDLV
Sbjct: 127 PSKYSFNWNAMDVGPKRDLV 146

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332024348|gb|EGI64547.1| Plasma alpha-L-fucosidase [Acromyrmex echinatior]

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 55/78 (70%), Positives = 70/78 (89%)

Query: 9   TVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPS 68
           TV  FM++ Y P FTYQDFA+DFTAEFF+A+ WA++  +SGAKY+VLTSKHHEGYT+WPS
Sbjct: 91  TVIDFMKQRYPPNFTYQDFARDFTAEFFNASDWAELFQASGAKYIVLTSKHHEGYTMWPS 150

Query: 69  KYAFSWNSMDIGPKRDLV 86
           KY++SWNSMD+GP++DLV
Sbjct: 151 KYSYSWNSMDVGPQKDLV 168

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307187599|gb|EFN72603.1| Plasma alpha-L-fucosidase [Camponotus floridanus]

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 54/75 (72%), Positives = 69/75 (92%)

Query: 13  FMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAF 72
           FM++ Y P FTYQDFA+DFTAEFF+A+ WA++  +SGAKYVVLTSKHHEGYTLWPS+Y+F
Sbjct: 98  FMKQRYPPNFTYQDFARDFTAEFFNASEWAELFKASGAKYVVLTSKHHEGYTLWPSRYSF 157

Query: 73  SWNSMDIGPKRDLVD 87
           SWNSMD+GP+++L+D
Sbjct: 158 SWNSMDVGPRKNLID 172

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156544592|ref|XP_001603580.1| PREDICTED: alpha-L-fucosidase-like [Nasonia vitripennis]

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 56/77 (72%), Positives = 67/77 (87%)

Query: 10  VTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSK 69
           V  FM +NYKPGF+YQ+FAKDFTA F+D   W++I  +SGAKY+VLTSKHHEGYTLWPSK
Sbjct: 74  VDNFMRKNYKPGFSYQEFAKDFTATFYDPKRWSEIFENSGAKYIVLTSKHHEGYTLWPSK 133

Query: 70  YAFSWNSMDIGPKRDLV 86
           Y+FSWN+MD+GP RDLV
Sbjct: 134 YSFSWNAMDVGPHRDLV 150

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390350281|ref|XP_796773.3| PREDICTED: alpha-L-fucosidase-like [Strongylocentrotus purpuratus]

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 58/80 (72%), Positives = 67/80 (83%)

Query: 7   NSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLW 66
            + V KFME NY+PGFTY DFA  F AEFFD N WADI  +SGAKY+VLTSKHHEG+T W
Sbjct: 78  QADVVKFMEDNYRPGFTYPDFAPMFKAEFFDPNQWADIFKASGAKYIVLTSKHHEGFTNW 137

Query: 67  PSKYAFSWNSMDIGPKRDLV 86
           PSKY+++WNSMD+GPKRDLV
Sbjct: 138 PSKYSWNWNSMDVGPKRDLV 157

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|312380954|gb|EFR26816.1| hypothetical protein AND_06825 [Anopheles darlingi]

 Score =  127 bits (319), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 55/76 (72%), Positives = 64/76 (84%)

Query: 11  TKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKY 70
            +FM  NYKPGFTYQDFA DFTAE F+A  WAD+   SGA+YVVLTSKHHEGYTLWPSK+
Sbjct: 86  VQFMRDNYKPGFTYQDFASDFTAELFNATEWADLFERSGARYVVLTSKHHEGYTLWPSKH 145

Query: 71  AFSWNSMDIGPKRDLV 86
           AF WN++D+GP RD+V
Sbjct: 146 AFGWNALDVGPHRDIV 161

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
UNIPROTKB|E1BS94	378	FUCA2 "Uncharacterized protein	0.715	0.193	0.726	2.3e-29
UNIPROTKB|F1S715	467	FUCA2 "Uncharacterized protein	0.725	0.158	0.702	1.2e-28
ZFIN|ZDB-GENE-040822-39	453	fuca2 "fucosidase, alpha-L- 2,	0.745	0.167	0.684	2.3e-27
WB|WBGene00012225	482	W03G11.3 [Caenorhabditis elega	0.794	0.168	0.629	2.5e-27
UNIPROTKB|F1N5H2	468	FUCA2 "Uncharacterized protein	0.725	0.158	0.689	3.3e-27
FB|FBgn0036169	494	Fuca "alpha-L-fucosidase" [Dro	0.784	0.161	0.65	5e-27
UNIPROTKB|F1P8G4	397	FUCA2 "Uncharacterized protein	0.764	0.196	0.653	9.4e-27
UNIPROTKB|Q9BTY2	467	FUCA2 "Plasma alpha-L-fucosida	0.735	0.160	0.64	2.5e-26
RGD|1303053	459	Fuca2 "fucosidase, alpha-L- 2,	0.725	0.161	0.648	7.8e-25
RGD|2636	462	Fuca1 "fucosidase, alpha-L- 1,	0.784	0.173	0.587	3.9e-24

UNIPROTKB|E1BS94 FUCA2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 309 (113.8 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
 Identities = 53/73 (72%), Positives = 64/73 (87%)

Query:    14 MERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFS 73
             M+ NY PGF+Y+DF   FTAEFFD N WADIL +SGAKYVVLTSKHHEG+TLW SKY+++
Sbjct:     1 MKANYPPGFSYEDFGPLFTAEFFDPNQWADILKASGAKYVVLTSKHHEGFTLWGSKYSWN 60

Query:    74 WNSMDIGPKRDLV 86
             WN++D+GPKRDLV
Sbjct:    61 WNAVDVGPKRDLV 73

GO:0004560 "alpha-L-fucosidase activity" evidence=IEA

GO:0006004 "fucose metabolic process" evidence=IEA

UNIPROTKB|F1S715 FUCA2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 304 (112.1 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
 Identities = 52/74 (70%), Positives = 62/74 (83%)

Query:    13 FMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAF 72
             FM+ NY P FTY DF   FTA+FFDAN WADIL +SGAKY+VLTSKHHEG+TLW SKY++
Sbjct:    89 FMKNNYPPDFTYADFGPQFTAKFFDANQWADILQASGAKYIVLTSKHHEGFTLWGSKYSW 148

Query:    73 SWNSMDIGPKRDLV 86
             +WN+ D GPKRD+V
Sbjct:   149 NWNAADEGPKRDIV 162

GO:0006004 "fucose metabolic process" evidence=IEA

GO:0004560 "alpha-L-fucosidase activity" evidence=IEA

ZFIN|ZDB-GENE-040822-39 fuca2 "fucosidase, alpha-L- 2, plasma" [Danio rerio (taxid:7955)]

 Score = 307 (113.1 bits), Expect = 2.3e-27, P = 2.3e-27
 Identities = 52/76 (68%), Positives = 65/76 (85%)

Query:    12 KFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYA 71
             KFME+NY PGFTY DFA  FTAEFFD N   DI ASSGA+Y+VLT+KHHEG+T+W SKY+
Sbjct:    75 KFMEQNYPPGFTYTDFAPQFTAEFFDPNERVDIFASSGARYIVLTTKHHEGFTMWGSKYS 134

Query:    72 FSWNSMDIGPKRDLVD 87
             ++WN++ +GPKRDLV+
Sbjct:   135 WTWNAVSVGPKRDLVN 150

GO:0003824 "catalytic activity" evidence=IEA

GO:0004560 "alpha-L-fucosidase activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006004 "fucose metabolic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

WB|WBGene00012225 W03G11.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 309 (113.8 bits), Expect = 2.5e-27, P = 2.5e-27
 Identities = 51/81 (62%), Positives = 69/81 (85%)

Query:     6 PNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTL 65
             P+  V  F+++NYKPG TY DFAKDFTAE+F+AN +A+ + +SGA+Y V TSKHHEG+T+
Sbjct:    67 PDKDVVNFVDKNYKPGTTYADFAKDFTAEYFNANQFAETVKTSGARYFVFTSKHHEGFTM 126

Query:    66 WPSKYAFSWNSMDIGPKRDLV 86
             WPS+ +++WNSMDIGPKRD+V
Sbjct:   127 WPSRTSWNWNSMDIGPKRDIV 147

GO:0004560 "alpha-L-fucosidase activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006004 "fucose metabolic process" evidence=IEA

UNIPROTKB|F1N5H2 FUCA2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 307 (113.1 bits), Expect = 3.3e-27, P = 3.3e-27
 Identities = 51/74 (68%), Positives = 65/74 (87%)

Query:    13 FMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAF 72
             FM+ NY P FTY+DF   FTA+FFDAN WADIL +SGAKYVVLTSKHHEG+TLW S+Y++
Sbjct:    90 FMKNNYPPDFTYEDFGPLFTAKFFDANQWADILQASGAKYVVLTSKHHEGFTLWGSEYSW 149

Query:    73 SWNSMDIGPKRDLV 86
             +WN++D+GPKRD++
Sbjct:   150 NWNAVDVGPKRDII 163

GO:0006004 "fucose metabolic process" evidence=IEA

GO:0004560 "alpha-L-fucosidase activity" evidence=IEA

FB|FBgn0036169 Fuca "alpha-L-fucosidase" [Drosophila melanogaster (taxid:7227)]

 Score = 307 (113.1 bits), Expect = 5.0e-27, P = 5.0e-27
 Identities = 52/80 (65%), Positives = 64/80 (80%)

Query:     7 NSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLW 66
             N    +FM+RNYKP FTYQ+FA  FTAE F+A  WA +   SGA+YVVLTSKHH+G+TLW
Sbjct:    83 NPEYVQFMQRNYKPDFTYQEFASQFTAELFNATKWALLFKDSGARYVVLTSKHHDGFTLW 142

Query:    67 PSKYAFSWNSMDIGPKRDLV 86
             PSK ++ WNSMD+GPKRD+V
Sbjct:   143 PSKNSYGWNSMDVGPKRDIV 162

GO:0004560 "alpha-L-fucosidase activity" evidence=ISS

GO:0016139 "glycoside catabolic process" evidence=ISS

GO:0006004 "fucose metabolic process" evidence=ISS

GO:0005575 "cellular_component" evidence=ND

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0042806 "fucose binding" evidence=IDA

UNIPROTKB|F1P8G4 FUCA2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 51/78 (65%), Positives = 65/78 (83%)

Query:     9 TVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPS 68
             T  +FM+ NY P F Y+DF   FTA+FF+A+HWADI  +SGAKY+VLTSKHHEG+TLW S
Sbjct:    15 TYVQFMKNNYPPNFKYEDFGPLFTAKFFNASHWADIFQASGAKYIVLTSKHHEGFTLWGS 74

Query:    69 KYAFSWNSMDIGPKRDLV 86
             KY+++WN++D GPKRDLV
Sbjct:    75 KYSWNWNAVDEGPKRDLV 92

GO:0006004 "fucose metabolic process" evidence=IEA

GO:0004560 "alpha-L-fucosidase activity" evidence=IEA

UNIPROTKB|Q9BTY2 FUCA2 "Plasma alpha-L-fucosidase" [Homo sapiens (taxid:9606)]

 Score = 286 (105.7 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
 Identities = 48/75 (64%), Positives = 63/75 (84%)

Query:    12 KFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYA 71
             +FM+ NY P F Y+DF   FTA+FF+AN WADI  +SGAKY+VLTSKHHEG+TLW S+Y+
Sbjct:    88 EFMKDNYPPSFKYEDFGPLFTAKFFNANQWADIFQASGAKYIVLTSKHHEGFTLWGSEYS 147

Query:    72 FSWNSMDIGPKRDLV 86
             ++WN++D GPKRD+V
Sbjct:   148 WNWNAIDEGPKRDIV 162

GO:0006004 "fucose metabolic process" evidence=IEA

GO:0004560 "alpha-L-fucosidase activity" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

RGD|1303053 Fuca2 "fucosidase, alpha-L- 2, plasma" [Rattus norvegicus (taxid:10116)]

 Score = 286 (105.7 bits), Expect = 7.8e-25, P = 7.8e-25
 Identities = 48/74 (64%), Positives = 63/74 (85%)

Query:    13 FMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAF 72
             FM+ NY PGF Y+DF   FTA++F+AN WAD+L +SGAKYVVLTSKHHEG+TLW S +++
Sbjct:    81 FMDNNYPPGFKYEDFGVLFTAKYFNANQWADLLQASGAKYVVLTSKHHEGFTLWGSAHSW 140

Query:    73 SWNSMDIGPKRDLV 86
             +WN++D GPKRD+V
Sbjct:   141 NWNAVDEGPKRDIV 154

GO:0004560 "alpha-L-fucosidase activity" evidence=TAS

GO:0005576 "extracellular region" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=TAS

GO:0006004 "fucose metabolic process" evidence=IEA

RGD|2636 Fuca1 "fucosidase, alpha-L- 1, tissue" [Rattus norvegicus (taxid:10116)]

 Score = 280 (103.6 bits), Expect = 3.9e-24, P = 3.9e-24
 Identities = 47/80 (58%), Positives = 60/80 (75%)

Query:     7 NSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLW 66
             +S   +FM+ NY PGF+Y DFA  FTA FF    WAD+  ++GAKYVVLT+KHHEG+T W
Sbjct:    82 SSAYVRFMKENYPPGFSYADFAPQFTARFFHPEEWADLFQAAGAKYVVLTAKHHEGFTNW 141

Query:    67 PSKYAFSWNSMDIGPKRDLV 86
             PS  +++WNS D+GP RDLV
Sbjct:   142 PSAVSWNWNSKDVGPHRDLV 161

GO:0004560 "alpha-L-fucosidase activity" evidence=NAS

GO:0005764 "lysosome" evidence=IDA

GO:0006004 "fucose metabolic process" evidence=NAS

GO:0008150 "biological_process" evidence=ND

GO:0015928 "fucosidase activity" evidence=IDA

GO:0016139 "glycoside catabolic process" evidence=NAS

GO:0030246 "carbohydrate binding" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5RFI5	FUCO2_PONAB	3, ., 2, ., 1, ., 5, 1	0.6184	0.7450	0.1634	yes	N/A
Q99KR8	FUCO2_MOUSE	3, ., 2, ., 1, ., 5, 1	0.6351	0.7254	0.1605	yes	N/A
P10901	FUCO_DICDI	3, ., 2, ., 1, ., 5, 1	0.5232	0.8137	0.1800	yes	N/A
Q6AYS4	FUCO2_RAT	3, ., 2, ., 1, ., 5, 1	0.6486	0.7254	0.1612	yes	N/A
P49713	FUCO_CAEEL	3, ., 2, ., 1, ., 5, 1	0.6219	0.8039	0.1701	yes	N/A
Q9VTJ4	FUCO_DROME	3, ., 2, ., 1, ., 5, 1	0.65	0.7843	0.1619	yes	N/A
C3YWU0	FUCO_BRAFL	3, ., 2, ., 1, ., 5, 1	0.6493	0.7549	0.1714	yes	N/A
Q9BTY2	FUCO2_HUMAN	3, ., 2, ., 1, ., 5, 1	0.6315	0.7450	0.1627	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	102
smart00812	384	smart00812, Alpha_L_fucos, Alpha-L-fucosidase	1e-38
pfam01120	320	pfam01120, Alpha_L_fucos, Alpha-L-fucosidase	2e-30
COG3669	430	COG3669, COG3669, Alpha-L-fucosidase [Carbohydrate	1e-20

>gnl|CDD|214829 smart00812, Alpha_L_fucos, Alpha-L-fucosidase

 Score =  132 bits (333), Expect = 1e-38
 Identities = 47/82 (57%), Positives = 58/82 (70%), Gaps = 1/82 (1%)

Query: 5   NPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYT 64
            P S   K   +NY P F Y+DFA  FTAE FD   WAD+   +GAKYVVLT+KHH+G+ 
Sbjct: 50  QPGSPEYKHHIKNYGPEFGYKDFAPQFTAEKFDPEEWADLFKKAGAKYVVLTTKHHDGFC 109

Query: 65  LWPSKYAFSWNSMDIGPKRDLV 86
           LW SKY+ +WN++D GPKRDLV
Sbjct: 110 LWDSKYS-NWNAVDTGPKRDLV 130

O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. Length = 384

>gnl|CDD|216307 pfam01120, Alpha_L_fucos, Alpha-L-fucosidase

 Score =  109 bits (274), Expect = 2e-30
 Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 1/77 (1%)

Query: 12  KFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYA 71
             M + Y P  TY DFAK F  E FDA+ WA +   +GAKYVVLT+KHH+G+T+W SKY+
Sbjct: 44  YSMFKAYIPVATYGDFAKQFNPEKFDADEWAKLAKEAGAKYVVLTTKHHDGFTMWDSKYS 103

Query: 72  FSWNSMDIGPKRDLVDY 88
             WNS+D GPKRD+V  
Sbjct: 104 -DWNSVDTGPKRDIVGE 119

Length = 320

>gnl|CDD|226195 COG3669, COG3669, Alpha-L-fucosidase [Carbohydrate transport and metabolism]

 Score = 84.6 bits (209), Expect = 1e-20
 Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)

Query: 22  FTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGP 81
           F  Q+F   FTAE +D   WA +   +GAKYV+L +KHH+G+ LWP+ Y+  WNS+  GP
Sbjct: 40  FGGQEFPPRFTAENWDPREWARLFKEAGAKYVILVAKHHDGFALWPTDYS-VWNSVKRGP 98

Query: 82  KRDLV 86
           KRDLV
Sbjct: 99  KRDLV 103

Length = 430

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	102
smart00812	384	Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydro	100.0
PF01120	346	Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00	100.0
KOG3340|consensus	454		100.0
COG3669	430	Alpha-L-fucosidase [Carbohydrate transport and met	99.98
PF14871	132	GHL6: Hypothetical glycosyl hydrolase 6	99.15
PF02638	311	DUF187: Glycosyl hydrolase like GH101; InterPro: I	97.14
PF14488	166	DUF4434: Domain of unknown function (DUF4434)	96.98
COG1649	418	Uncharacterized protein conserved in bacteria [Fun	93.79
PF13200	316	DUF4015: Putative glycosyl hydrolase domain	93.27
PF04476	235	DUF556: Protein of unknown function (DUF556); Inte	91.51
PRK13363	335	protocatechuate 4,5-dioxygenase subunit beta; Prov	90.83
PRK02227	238	hypothetical protein; Provisional	86.87
smart00642	166	Aamy Alpha-amylase domain.	83.5
PLN02446	262	(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methy	81.11

>smart00812 Alpha_L_fucos Alpha-L-fucosidase

Probab=100.00  E-value=1.5e-38  Score=257.17  Aligned_cols=94  Identities=52%  Similarity=0.913  Sum_probs=90.2

Q ss_pred             CCChHHHHHHHHhCCCCCChHHhhccCCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCc
Q psy1381           5 NPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRD   84 (102)
Q Consensus         5 ~~~~~y~~~~~~~~~~~~~Y~~~a~~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rD   84 (102)
                      .+++...++|.++|||.++|++++++|+|++|||++||+++|+|||||+|||||||||||||||+++ +||+++.+|+||
T Consensus        50 ~~~~~~~~~~~~~~~~~~~Y~~~~~~F~p~~fD~~~Wa~~~k~AGakY~vlTaKHHDGF~lw~S~~t-~~n~~~~~pkrD  128 (384)
T smart00812       50 QPNSPEYKHHIKNYGPEFGYKDFAPQFTAEKFDPEEWADLFKKAGAKYVVLTAKHHDGFCLWDSKYS-NWNAVDTGPKRD  128 (384)
T ss_pred             CCCCcHHHHHHhccCCcccHHHHHhcCCchhCCHHHHHHHHHHcCCCeEEeeeeecCCccccCCCCC-CCcccCCCCCcc
Confidence            3567788999999999999999999999999999999999999999999999999999999999999 899999999999


Q ss_pred             hHHHHHHHHhhcCCC
Q psy1381          85 LVDYTFGNWFTGGSP   99 (102)
Q Consensus        85 iv~el~~a~~~~Gl~   99 (102)
                      ||+||++|||++||.
T Consensus       129 iv~el~~A~rk~Glk  143 (384)
T smart00812      129 LVGELADAVRKRGLK  143 (384)
T ss_pred             hHHHHHHHHHHcCCe
Confidence            999999999999985

O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site PUBMED:. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.

>PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3

Probab=100.00  E-value=2.1e-36  Score=240.09  Aligned_cols=85  Identities=46%  Similarity=0.793  Sum_probs=66.7

Q ss_pred             HHHhCCCCCChHHhhccCCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHH
Q psy1381          14 MERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNW   93 (102)
Q Consensus        14 ~~~~~~~~~~Y~~~a~~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~   93 (102)
                      +.+..++..+|.++++.|+|++|||+|||++||+|||||+|||||||||||||||+++ +||+++.+++||||+||++||
T Consensus        69 ~~~~~~~~~~Y~~~~~~F~p~~fD~dqW~~~ak~aGakY~VlTakHHDGF~LW~S~~t-~~~v~~~~~krDiv~El~~A~  147 (346)
T PF01120_consen   69 MGSYKIPEEEYGDFAKQFNPTKFDADQWAKLAKDAGAKYVVLTAKHHDGFCLWPSKYT-DYNVVNSGPKRDIVGELADAC  147 (346)
T ss_dssp             HHHHTCCCSCGGGHGGG---TT--HHHHHHHHHHTT-SEEEEEEE-TT--BSS--TT--SSBGGGGGGTS-HHHHHHHHH
T ss_pred             ccccccchhhHhhhhhhCCcccCCHHHHHHHHHHcCCCEEEeehhhcCccccCCCCCC-cccccCCCCCCCHHHHHHHHH
Confidence            3345689999999999999999999999999999999999999999999999999999 699999999999999999999


Q ss_pred             hhcCCC
Q psy1381          94 FTGGSP   99 (102)
Q Consensus        94 ~~~Gl~   99 (102)
                      |++||.
T Consensus       148 rk~Glk  153 (346)
T PF01120_consen  148 RKYGLK  153 (346)
T ss_dssp             HHTT-E
T ss_pred             HHcCCe
Confidence            999984

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Family 29 (GH29 from CAZY) encompasses alpha-L-fucosidases (3.2.1.51 from EC) [], which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration []. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain []. Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell []. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity []. ; GO: 0004560 alpha-L-fucosidase activity, 0005975 carbohydrate metabolic process; PDB: 3EYP_B 2ZX6_A 2ZWY_B 2ZX8_B 2WSP_A 2ZXA_A 2ZWZ_B 1ODU_B 1HL9_A 2ZX5_B ....

>KOG3340|consensus

Probab=100.00  E-value=4.6e-35  Score=236.13  Aligned_cols=94  Identities=55%  Similarity=1.022  Sum_probs=90.6

Q ss_pred             CChHHHHHHHHhCCCCCChHHhhccCCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCch
Q psy1381           6 PNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDL   85 (102)
Q Consensus         6 ~~~~y~~~~~~~~~~~~~Y~~~a~~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDi   85 (102)
                      ..+.|++||.+||+|.++|++++++|+++.|+|.|||++++++||||||||+|||||||||||+++++|||++.||+|||
T Consensus        72 ~~P~yv~Fmd~ny~P~fty~df~~~Fta~~fnA~qWa~lfq~sGaryvVLTsKHHeGFtlWPS~~SwnwNS~dvgpkrDi  151 (454)
T KOG3340|consen   72 FGPKYVTFMDDNYKPGFTYADFASQFTATLFNASQWADLFQDSGARYVVLTSKHHEGFTLWPSEYSWNWNSMDVGPKRDI  151 (454)
T ss_pred             CCCceeeeccccCCCCCchhhchhhhhhhhcCHHHHHHHHHhcCceEEEEeecccCceecCCCcCcccccccccCccccH
Confidence            34569999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcCCC
Q psy1381          86 VDYTFGNWFTGGSP   99 (102)
Q Consensus        86 v~el~~a~~~~Gl~   99 (102)
                      |+||+.|.|+++|-
T Consensus       152 V~EL~~A~rk~dir  165 (454)
T KOG3340|consen  152 VGELASAIRKRDIR  165 (454)
T ss_pred             HHHHHHHHHhcCcc
Confidence            99999999999873

>COG3669 Alpha-L-fucosidase [Carbohydrate transport and metabolism]

Probab=99.98  E-value=1.9e-33  Score=229.16  Aligned_cols=92  Identities=41%  Similarity=0.763  Sum_probs=87.9

Q ss_pred             ChHHHHHHHHhCCCC--CChHHhhccCCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCc
Q psy1381           7 NSTVTKFMERNYKPG--FTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRD   84 (102)
Q Consensus         7 ~~~y~~~~~~~~~~~--~~Y~~~a~~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rD   84 (102)
                      -++..+||-+||+..  ++|.+++++||||+|||.+||+++|+|||||+|+|+|||||||||||++| .||+++.|||||
T Consensus        23 ~~~~~~fh~nT~~dq~~f~~~~f~~~Ftae~wDP~eWar~fK~aGAKyvilvakHHDGFaLw~t~ys-~wnsvk~GpKrD  101 (430)
T COG3669          23 GSPFYHFHPNTYGDQEWFGGQEFPPRFTAENWDPREWARLFKEAGAKYVILVAKHHDGFALWPTDYS-VWNSVKRGPKRD  101 (430)
T ss_pred             CCceEEeccccccCcccccccccccccCcccCCHHHHHHHHHHcCCcEEEEeeeecCCeeecccccc-cccccccCCccc
Confidence            466778999999876  99999999999999999999999999999999999999999999999999 899999999999


Q ss_pred             hHHHHHHHHhhcCCC
Q psy1381          85 LVDYTFGNWFTGGSP   99 (102)
Q Consensus        85 iv~el~~a~~~~Gl~   99 (102)
                      ||+|+++|.|.+||-
T Consensus       102 lvgela~Avr~qGL~  116 (430)
T COG3669         102 LVGELAKAVREQGLR  116 (430)
T ss_pred             HHHHHHHHHHHcCCe
Confidence            999999999999984

>PF14871 GHL6: Hypothetical glycosyl hydrolase 6

Probab=99.15  E-value=9.4e-11  Score=83.23  Aligned_cols=59  Identities=25%  Similarity=0.438  Sum_probs=53.7

Q ss_pred             CHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381          37 DANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP   99 (102)
Q Consensus        37 Dp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~   99 (102)
                      ||++|++.++++|+.-+++-+|=|.|+|.|||++.    .++.+-++||++|++++|++.||.
T Consensus         1 D~~~~~~~lk~~~v~si~i~a~~h~g~ayYPt~~~----~~hp~L~~Dllge~v~a~h~~Gir   59 (132)
T PF14871_consen    1 DPEQFVDTLKEAHVNSITIFAKCHGGYAYYPTKVG----PRHPGLKRDLLGEQVEACHERGIR   59 (132)
T ss_pred             CHHHHHHHHHHhCCCEEEEEcccccEEEEccCCCC----cCCCCCCcCHHHHHHHHHHHCCCE
Confidence            89999999999999999999999999999999995    235555799999999999999984

>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function

Probab=97.14  E-value=0.0014  Score=52.04  Aligned_cols=59  Identities=22%  Similarity=0.365  Sum_probs=48.5

Q ss_pred             HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCccccc-----CCCCCchHHHHHHHHhhcCCC
Q psy1381          39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMD-----IGPKRDLVDYTFGNWFTGGSP   99 (102)
Q Consensus        39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~-----~~p~rDiv~el~~a~~~~Gl~   99 (102)
                      ++.++.++++|+.-|++-++- .|.+||+|++- +|....     ..|+.|.+..+++.|+++||.
T Consensus        22 ~~~l~~l~~~~~N~V~~qVr~-~gda~Y~S~~~-p~s~~~~g~~~~~pg~DpL~~~I~eaHkrGle   85 (311)
T PF02638_consen   22 DEMLDDLKSAGFNAVFVQVRP-RGDALYPSDIE-PWSGYLTGKQGKDPGFDPLEFMIEEAHKRGLE   85 (311)
T ss_pred             HHHHHHHHHcCCCEEEEEEEe-CcEEEeccccc-ccccccCCCCCCCCCccHHHHHHHHHHHcCCE
Confidence            677788999999999999997 69999999996 343221     235789999999999999984

>PF14488 DUF4434: Domain of unknown function (DUF4434)

Probab=96.98  E-value=0.0044  Score=45.34  Aligned_cols=63  Identities=17%  Similarity=0.302  Sum_probs=51.8

Q ss_pred             CCCCHHHHHHH---HHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381          34 EFFDANHWADI---LASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP   99 (102)
Q Consensus        34 ~~fDp~~Wa~l---~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~   99 (102)
                      .++++++|-+.   +++.|+++||+.--=..|...+||+.. +..  -.-+..|+|..+.++|.+.|+.
T Consensus        15 ~~~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~-~~~--~~~~~~d~l~~~L~~A~~~Gmk   80 (166)
T PF14488_consen   15 QNWTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLS-PGG--FYMPPVDLLEMILDAADKYGMK   80 (166)
T ss_pred             cCCCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCcccc-Ccc--ccCCcccHHHHHHHHHHHcCCE
Confidence            68999999765   578899999999888888999999983 222  2236899999999999999973

>COG1649 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=93.79  E-value=0.23  Score=41.69  Aligned_cols=68  Identities=18%  Similarity=0.240  Sum_probs=53.5

Q ss_pred             cCCCCCCCHHHH---HHHHHHcCCCeEEEeeeecCCcccCCCCCCCCccccc-----CCCCCchHHHHHHHHhhcCCC
Q psy1381          30 DFTAEFFDANHW---ADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMD-----IGPKRDLVDYTFGNWFTGGSP   99 (102)
Q Consensus        30 ~F~p~~fDp~~W---a~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~-----~~p~rDiv~el~~a~~~~Gl~   99 (102)
                      .+....+++.+.   ++.++.+|+.-+.+..+ -+|.|+|+|++- .|....     ..++.|.++++++.++++||.
T Consensus        55 ~~~~v~~~~~el~~~ld~l~~ln~NTv~~qV~-~~G~~lypS~~~-p~s~~~~~~~~~~~g~DpLa~~I~~AHkr~l~  130 (418)
T COG1649          55 ADSRVLFQRQELKDILDDLQKLNFNTVYPQVW-NDGDALYPSAVL-PWSDGLPGVLGVDPGYDPLAFVIAEAHKRGLE  130 (418)
T ss_pred             CCCcccccHHHHHHHHHHHHHcCCceeEEEEe-cCcccccccccc-ccccCcCcccCCCCCCChHHHHHHHHHhcCCe
Confidence            455667777554   55678899999988887 689999999997 443332     345899999999999999996

>PF13200 DUF4015: Putative glycosyl hydrolase domain

Probab=93.27  E-value=0.24  Score=40.02  Aligned_cols=57  Identities=16%  Similarity=0.259  Sum_probs=47.0

Q ss_pred             HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCC---chHHHHHHHHhhcCC
Q psy1381          39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKR---DLVDYTFGNWFTGGS   98 (102)
Q Consensus        39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~r---Div~el~~a~~~~Gl   98 (102)
                      +..++++++.|...+|+..|=-+|...|+|+...   ....+..+   .=+++|++.|+++||
T Consensus        16 ~~~~~~i~~t~lNavVIDvKdd~G~i~y~s~~~~---~~~~ga~~~~i~D~~~l~~~l~e~gI   75 (316)
T PF13200_consen   16 DKLLDLIKRTELNAVVIDVKDDDGNITYDSQVPL---AREIGAVKPYIKDLKALVKKLKEHGI   75 (316)
T ss_pred             HHHHHHHHhcCCceEEEEEecCCceEEecCCCch---hhhcccccccccCHHHHHHHHHHCCC
Confidence            6889999999999999999999999999999872   22333322   337899999999997

>PF04476 DUF556: Protein of unknown function (DUF556); InterPro: IPR007565 The proteins in this entry are functionally uncharacterised

Probab=91.51  E-value=0.44  Score=37.28  Aligned_cols=54  Identities=15%  Similarity=0.129  Sum_probs=45.5

Q ss_pred             CCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381          34 EFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP   99 (102)
Q Consensus        34 ~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~   99 (102)
                      ..++|-++.++++++|+.-+|+=|-+-||-.|++--            ..+-+.+|++.||++||-
T Consensus       129 ~~~~p~~l~~~a~~aG~~gvMlDTa~Kdg~~L~d~~------------~~~~L~~Fv~~ar~~gL~  182 (235)
T PF04476_consen  129 GSISPLDLPEIAAEAGFDGVMLDTADKDGGSLFDHL------------SEEELAEFVAQARAHGLM  182 (235)
T ss_pred             cCCCHHHHHHHHHHcCCCEEEEecccCCCCchhhcC------------CHHHHHHHHHHHHHccch
Confidence            457899999999999999999999999987765421            256789999999999973

>PRK13363 protocatechuate 4,5-dioxygenase subunit beta; Provisional

Probab=90.83  E-value=0.73  Score=37.44  Aligned_cols=82  Identities=10%  Similarity=0.087  Sum_probs=57.7

Q ss_pred             CCCCChHHhhccC---------CCCCCCH---------HHHHHHHHHcCCCeEEEeeeec---------CCcccCCCCCC
Q psy1381          19 KPGFTYQDFAKDF---------TAEFFDA---------NHWADILASSGAKYVVLTSKHH---------EGYTLWPSKYA   71 (102)
Q Consensus        19 ~~~~~Y~~~a~~F---------~p~~fDp---------~~Wa~l~k~aGakyvvlTtKHH---------dGF~lW~S~~~   71 (102)
                      |..++|+++...=         +|+.-+-         +++++.++++...-+|+++.||         +.||+...+.-
T Consensus        40 ~~~~~~~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~a~~~~~~~i~~~~PDvlViispdh~~~F~~~~~p~f~I~~~~~~  119 (335)
T PRK13363         40 GRPWTYDALVAERAPENLEEQITPEERTERHAACEAAIERMRDAIEAARIDVAVIVGNDQMELFTTDNNPAFAIYYGETI  119 (335)
T ss_pred             CCCCCHHHHHHhhcchhhhcccCcccccchHHHHHHHHHHHHHHHHHhCCCEEEEEcCCchhhcccccCCceEEeeccee
Confidence            6788999886532         3332221         6788889999999999999999         77888877663


Q ss_pred             CC-c------------c-----------cccCCCCCchHHHHHHHHhhcCCCC
Q psy1381          72 FS-W------------N-----------SMDIGPKRDLVDYTFGNWFTGGSPG  100 (102)
Q Consensus        72 ~~-~------------~-----------s~~~~p~rDiv~el~~a~~~~Gl~~  100 (102)
                      .. +            .           ........+|..++++.+.+.|++-
T Consensus       120 ~g~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gd~eLA~~I~~~l~~~G~d~  172 (335)
T PRK13363        120 RNNPASREKLPSLPPGVKAAMPGYMPDAETTYPVVPELARHMIRRLVDDGFDI  172 (335)
T ss_pred             ccchhhccccccccccccccccccCCCCCcCCCCCHHHHHHHHHHHHHcCCCe
Confidence            11 0            0           0112225789999999999999974

>PRK02227 hypothetical protein; Provisional

Probab=86.87  E-value=1.2  Score=34.81  Aligned_cols=52  Identities=13%  Similarity=0.109  Sum_probs=42.0

Q ss_pred             CCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381          35 FFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGS   98 (102)
Q Consensus        35 ~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl   98 (102)
                      ..+|..|.++++++|+..+||=|---||-.|++-            -..+-+.+|++.||++||
T Consensus       130 ~~~~~~l~~~a~~aGf~g~MlDTa~Kdg~~Lfd~------------l~~~~L~~Fv~~ar~~Gl  181 (238)
T PRK02227        130 SVSPLSLPAIAADAGFDGAMLDTAIKDGKSLFDH------------MDEEELAEFVAEARSHGL  181 (238)
T ss_pred             CCChHHHHHHHHHcCCCEEEEecccCCCcchHhh------------CCHHHHHHHHHHHHHccc
Confidence            3488999999999999999997777776655431            135789999999999997

>smart00642 Aamy Alpha-amylase domain

Probab=83.50  E-value=3.5  Score=29.76  Aligned_cols=57  Identities=12%  Similarity=0.043  Sum_probs=35.2

Q ss_pred             HHHHHcCCCeEEEeeeecCCcc-cCCCCCC-CCcccccCC-CCCchHHHHHHHHhhcCCC
Q psy1381          43 DILASSGAKYVVLTSKHHEGYT-LWPSKYA-FSWNSMDIG-PKRDLVDYTFGNWFTGGSP   99 (102)
Q Consensus        43 ~l~k~aGakyvvlTtKHHdGF~-lW~S~~~-~~~~s~~~~-p~rDiv~el~~a~~~~Gl~   99 (102)
                      +-+++.|++.|.|+--+..+-. .+...+. .+|..++.. ...+=+++|+++|+++||-
T Consensus        26 ~yl~~lG~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~   85 (166)
T smart00642       26 DYLKDLGVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIK   85 (166)
T ss_pred             HHHHHCCCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCE
Confidence            3589999999999876654431 1222221 122222211 1357789999999999984

>PLN02446 (5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase

Probab=81.11  E-value=5.2  Score=31.64  Aligned_cols=73  Identities=11%  Similarity=0.004  Sum_probs=54.1

Q ss_pred             ChHHHHHHHHhCCCCC------------ChHHhhccC-CCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCC
Q psy1381           7 NSTVTKFMERNYKPGF------------TYQDFAKDF-TAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFS   73 (102)
Q Consensus         7 ~~~y~~~~~~~~~~~~------------~Y~~~a~~F-~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~   73 (102)
                      ||++.+-+.+.||+..            .|.=..+.| ..+.++|.+|+..+.+.|++.+++|.-.-||           
T Consensus       121 ~p~~v~~~~~~~G~~~IvvsiD~k~~~g~~~Va~~GW~~~t~~~~~e~~~~~~~~g~~eii~TdI~rDG-----------  189 (262)
T PLN02446        121 DLERLKDLVRLVGKQRLVLDLSCRKKDGRYYVVTDRWQKFSDLAVDEETLEFLAAYCDEFLVHGVDVEG-----------  189 (262)
T ss_pred             CHHHHHHHHHHhCCCCEEEEEEEEecCCCEEEEECCCcccCCCCHHHHHHHHHHhCCCEEEEEEEcCCC-----------
Confidence            4888888888886521            122234556 4479999999999999999999999999987           


Q ss_pred             cccccCCCCCchHHHHHHHH
Q psy1381          74 WNSMDIGPKRDLVDYTFGNW   93 (102)
Q Consensus        74 ~~s~~~~p~rDiv~el~~a~   93 (102)
                         +..||..++++++.+++
T Consensus       190 ---tl~G~d~el~~~l~~~~  206 (262)
T PLN02446        190 ---KRLGIDEELVALLGEHS  206 (262)
T ss_pred             ---cccCCCHHHHHHHHhhC
Confidence               23456677777776665

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	102
2zwy_A	455	Alpha-L-Fucosidase Length = 455		9e-15
1odu_A	449	Crystal Structure Of Thermotoga Maritima Alpha-Fuco		9e-15
1hl8_A	449	Crystal Structure Of Thermotoga Maritima Alpha-Fuco		9e-15
2wsp_A	449	Thermotoga Maritima Alpha-L-Fucosynthase, Tmd224g,		9e-15
2wvv_B	450	Crystal Structure Of An Alpha-L-Fucosidase Gh29 Fro		1e-07
2wvv_A	450	Crystal Structure Of An Alpha-L-Fucosidase Gh29 Fro		1e-07
2wvs_A	443	Crystal Structure Of An Alpha-L-Fucosidase Gh29 Tra		1e-07
2wvt_A	443	Crystal Structure Of An Alpha-L-Fucosidase Gh29 Fro		1e-07
2xib_A	453	Crystal Structure Of An Alpha-L-Fucosidase Gh29 Fro		1e-07
3mo4_A	480	The Crystal Structure Of An Alpha-(1-3,4)-Fucosidas		2e-05
3uet_A	478	Crystal Structure Of Alpha-1,34-Fucosidase From Bif		3e-05
3ues_A	478	Crystal Structure Of Alpha-1,34-Fucosidase From Bif		3e-05
3eyp_A	469	Crystal Structure Of Putative Alpha-L-Fucosidase Fr		1e-04

>pdb|2ZWY|A Chain A, Alpha-L-Fucosidase Length = 455

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 11/92 (11%)
Query: 16  RNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWN 75
           + Y   F Y+ FA  FTAE +D   WAD+   +GAKYV+ T+KHH+G+ LW +KY   +N
Sbjct: 85  KTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYT-DFN 143
Query: 76  SMDIGPKRDLV----------DYTFGNWFTGG 97
           S+  GPKRDLV             FG +++GG
Sbjct: 144 SVKRGPKRDLVGDLAKAVREAGLRFGVYYSGG 175

>pdb|1ODU|A Chain A, Crystal Structure Of Thermotoga Maritima Alpha-Fucosidase In Complex With Fucose Length = 449

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 11/92 (11%)
Query: 16  RNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWN 75
           + Y   F Y+ FA  FTAE +D   WAD+   +GAKYV+ T+KHH+G+ LW +KY   +N
Sbjct: 85  KTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYT-DFN 143
Query: 76  SMDIGPKRDLV----------DYTFGNWFTGG 97
           S+  GPKRDLV             FG +++GG
Sbjct: 144 SVKRGPKRDLVGDLAKAVREAGLRFGVYYSGG 175

>pdb|1HL8|A Chain A, Crystal Structure Of Thermotoga Maritima Alpha-Fucosidase Length = 449

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 11/92 (11%)
Query: 16  RNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWN 75
           + Y   F Y+ FA  FTAE +D   WAD+   +GAKYV+ T+KHH+G+ LW +KY   +N
Sbjct: 85  KTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYT-DFN 143
Query: 76  SMDIGPKRDLV----------DYTFGNWFTGG 97
           S+  GPKRDLV             FG +++GG
Sbjct: 144 SVKRGPKRDLVGDLAKAVREAGLRFGVYYSGG 175

>pdb|2WSP|A Chain A, Thermotoga Maritima Alpha-L-Fucosynthase, Tmd224g, In Complex With Alpha-L-Fuc-(1-2)-Beta-L-Fuc-N3 Length = 449

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 11/92 (11%)
Query: 16  RNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWN 75
           + Y   F Y+ FA  FTAE +D   WAD+   +GAKYV+ T+KHH+G+ LW +KY   +N
Sbjct: 85  KTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYT-DFN 143
Query: 76  SMDIGPKRDLV----------DYTFGNWFTGG 97
           S+  GPKRDLV             FG +++GG
Sbjct: 144 SVKRGPKRDLVGDLAKAVREAGLRFGVYYSGG 175

>pdb|2WVV|B Chain B, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From Bacteroides Thetaiotaomicron Length = 450

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 36  FDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLV 86
           FDA  WA +    G KYV +T+KHHEG+ LWPSKY   +   +   KRD++
Sbjct: 78  FDAKKWAKMAKEMGTKYVKITTKHHEGFCLWPSKYT-KYTVANTPYKRDIL 127

>pdb|2WVV|A Chain A, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From Bacteroides Thetaiotaomicron Length = 450

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 36  FDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLV 86
           FDA  WA +    G KYV +T+KHHEG+ LWPSKY   +   +   KRD++
Sbjct: 78  FDAKKWAKMAKEMGTKYVKITTKHHEGFCLWPSKYT-KYTVANTPYKRDIL 127

>pdb|2WVS|A Chain A, Crystal Structure Of An Alpha-L-Fucosidase Gh29 Trapped Covalent Intermediate From Bacteroides Thetaiotaomicron In Complex With 2-Fluoro-Fucosyl Fluoride Using An E288q Mutant Length = 443

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 36  FDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLV 86
           FDA  WA +    G KYV +T+KHHEG+ LWPSKY   +   +   KRD++
Sbjct: 82  FDAKKWAKMAKEMGTKYVKITTKHHEGFCLWPSKYT-KYTVANTPYKRDIL 131

>pdb|2WVT|A Chain A, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From Bacteroides Thetaiotaomicron In Complex With A Novel Iminosugar Fucosidase Inhibitor Length = 443

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 36  FDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLV 86
           FDA  WA +    G KYV +T+KHHEG+ LWPSKY   +   +   KRD++
Sbjct: 82  FDAKKWAKMAKEMGTKYVKITTKHHEGFCLWPSKYT-KYTVANTPYKRDIL 131

>pdb|2XIB|A Chain A, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From Bacteroides Thetaiotaomicron In Complex With Deoxyfuconojirimycin Length = 453

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 25/35 (71%)
Query: 36  FDANHWADILASSGAKYVVLTSKHHEGYTLWPSKY 70
           FDA  WA +    G KYV +T+KHHEG+ LWPSKY
Sbjct: 81  FDAKKWAKMAKEMGTKYVKITTKHHEGFCLWPSKY 115

>pdb|3MO4|A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 Length = 480

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 31 FTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSK 69
          F     D + W D L + G   V+LT KHH+G+ LWPS+
Sbjct: 59 FNPRNVDVDQWXDALVAGGXAGVILTCKHHDGFCLWPSR 97

>pdb|3UET|A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis D172aE217A MUTANT COMPLEXED WITH LACTO-N- Fucopentaose Ii Length = 478

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 31 FTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSK 69
          F     D + W D L + G   V+LT KHH+G+ LWPS+
Sbjct: 57 FNPRNVDVDQWMDALVAGGMAGVILTCKHHDGFCLWPSR 95

>pdb|3UES|A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin Length = 478

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 31 FTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSK 69
          F     D + W D L + G   V+LT KHH+G+ LWPS+
Sbjct: 57 FNPRNVDVDQWMDALVAGGMAGVILTCKHHDGFCLWPSR 95

>pdb|3EYP|A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron Length = 469

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 31 FTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKY 70
          F     D   W   L ++G    +LT+KH +G+ LWPSKY
Sbjct: 49 FNPTALDCRQWMQTLKAAGIPAAILTAKHADGFCLWPSKY 88

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	102
2wvv_A	450	Alpha-L-fucosidase; alpha-L-fucose, hydrolase, gly	6e-31
2zxd_A	455	Alpha-L-fucosidase, putative; TIM barrel, hydrolas	6e-23
3eyp_A	469	Putative alpha-L-fucosidase; structural genomics,	1e-22
3gza_A	443	Putative alpha-L-fucosidase; NP_812709.1, structur	1e-20
3ues_A	478	Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr	7e-20

>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A* Length = 450

 Score =  112 bits (281), Expect = 6e-31
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)

Query: 13  FMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAF 72
                  P   +      +    FDA  WA +    G KYV +T+KHHEG+ LWPSKY  
Sbjct: 55  LKSWAKVPADEWLKLMDQWNPTKFDAKKWAKMAKEMGTKYVKITTKHHEGFCLWPSKYT- 113

Query: 73  SWNSMDIGPKRDLV 86
            +   +   KRD++
Sbjct: 114 KYTVANTPYKRDIL 127

>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* Length = 455

 Score = 90.1 bits (223), Expect = 6e-23
 Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 1/82 (1%)

Query: 5   NPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYT 64
              S   ++  + Y   F Y+ FA  FTAE +D   WAD+   +GAKYV+ T+KHH+G+ 
Sbjct: 74  IKESPTWEYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFC 133

Query: 65  LWPSKYAFSWNSMDIGPKRDLV 86
           LW +KY   +NS+  GPKRDLV
Sbjct: 134 LWGTKYT-DFNSVKRGPKRDLV 154

>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron} Length = 469

 Score = 89.3 bits (221), Expect = 1e-22
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 17  NYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYA--FSW 74
            Y      +     F     D   W   L ++G    +LT+KH +G+ LWPSKY      
Sbjct: 35  EYVNEGDGKASTAIFNPTALDCRQWMQTLKAAGIPAAILTAKHADGFCLWPSKYTDYSVK 94

Query: 75  NSMDIGPKRDLV 86
           N+     K D+V
Sbjct: 95  NAAWKNGKGDVV 106

>3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomic center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482} Length = 443

 Score = 83.8 bits (207), Expect = 1e-20
 Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 2/80 (2%)

Query: 9   TVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPS 68
                            +    F     + + W     ++G K+ VLT+ H  G+ LW S
Sbjct: 32  VFDGIRYGQGNNRINPIEDYNIFNPTELNTDQWVQAAKAAGCKFAVLTATHETGFGLWQS 91

Query: 69  KY-AFSWNSMD-IGPKRDLV 86
               +   ++     K D+V
Sbjct: 92  DVNPYCLKAVKWRDGKGDIV 111

>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* Length = 478

 Score = 81.6 bits (201), Expect = 7e-20
 Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 3/68 (4%)

Query: 21  GFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAF--SWNSMD 78
           G  ++D    F     D + W D L + G   V+LT KHH+G+ LWPS+       +S  
Sbjct: 48  GLGHED-PALFNPRNVDVDQWMDALVAGGMAGVILTCKHHDGFCLWPSRLTRHTVASSPW 106

Query: 79  IGPKRDLV 86
              K DLV
Sbjct: 107 REGKGDLV 114

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	102
2zxd_A	455	Alpha-L-fucosidase, putative; TIM barrel, hydrolas	100.0
2wvv_A	450	Alpha-L-fucosidase; alpha-L-fucose, hydrolase, gly	100.0
3eyp_A	469	Putative alpha-L-fucosidase; structural genomics,	99.97
3ues_A	478	Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr	99.96
3gza_A	443	Putative alpha-L-fucosidase; NP_812709.1, structur	99.96
4h41_A	340	Putative alpha-L-fucosidase; hydrolase, carbohydra	99.7

>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A*

Probab=100.00  E-value=1.1e-38  Score=260.88  Aligned_cols=94  Identities=40%  Similarity=0.717  Sum_probs=90.7

Q ss_pred             CCChHHHHHHHHhCCCCCChHHhhccCCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCc
Q psy1381           5 NPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRD   84 (102)
Q Consensus         5 ~~~~~y~~~~~~~~~~~~~Y~~~a~~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rD   84 (102)
                      .+.+++.+||.++||++++|++|+++|+|++|||++||+++|+|||||+|||||||||||||||+++ +||+++.+|+||
T Consensus        74 ~~~~~~~~~~~~~yg~~~~Y~d~~~~F~p~~fDp~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t-~~ns~~~~pkrD  152 (455)
T 2zxd_A           74 IKESPTWEYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYT-DFNSVKRGPKRD  152 (455)
T ss_dssp             STTSHHHHHHHHHTCTTCCGGGHHHHCCCTTCCHHHHHHHHHHTTCSEEEEEEECTTCCBSSCCSSC-SCBTTTSTTCSC
T ss_pred             CCCChHHHHHHhhcCCCccHHHHHhhCCcccCCHHHHHHHHHHhCCCEEEEEeeccCCccccCCCCC-CCcccccCCCCC
Confidence            4577899999999999999999999999999999999999999999999999999999999999999 899999999999


Q ss_pred             hHHHHHHHHhhcCCC
Q psy1381          85 LVDYTFGNWFTGGSP   99 (102)
Q Consensus        85 iv~el~~a~~~~Gl~   99 (102)
                      ||+||++|||++||.
T Consensus       153 lv~El~~A~rk~Glk  167 (455)
T 2zxd_A          153 LVGDLAKAVREAGLR  167 (455)
T ss_dssp             HHHHHHHHHHHTTCE
T ss_pred             hHHHHHHHHHHcCCe
Confidence            999999999999984

>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A*

Probab=100.00  E-value=1e-35  Score=242.63  Aligned_cols=89  Identities=29%  Similarity=0.588  Sum_probs=82.1

Q ss_pred             HHHHHHHh-CCCCCChHHhhccCCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHH
Q psy1381          10 VTKFMERN-YKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDY   88 (102)
Q Consensus        10 y~~~~~~~-~~~~~~Y~~~a~~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~e   88 (102)
                      |.||...+ .++.++|++++++|+|++|||++||+++|+|||||+|||||||||||||||+++ +||+++.+++||||+|
T Consensus        51 ~~EW~~~~~~~~~~~Y~~~~~~F~p~~fDp~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t-~~n~~~~~~krDlv~e  129 (450)
T 2wvv_A           51 AAEWLKSWAKVPADEWLKLMDQWNPTKFDAKKWAKMAKEMGTKYVKITTKHHEGFCLWPSKYT-KYTVANTPYKRDILGE  129 (450)
T ss_dssp             CGGGHHHHTTCCHHHHHGGGGGCCCTTCCHHHHHHHHHHHTCSEEEEEEECTTCCBSSCCTTC-SCBGGGSTTCSCHHHH
T ss_pred             cchHhhccCCCChhhhHHHHhhCCcccCCHHHHHHHHHHcCCcEEEEEEeecCCccccCCCCC-CCccccCCCCCChHHH
Confidence            44666544 467889999999999999999999999999999999999999999999999999 7999999999999999


Q ss_pred             HHHHHhhcCCC
Q psy1381          89 TFGNWFTGGSP   99 (102)
Q Consensus        89 l~~a~~~~Gl~   99 (102)
                      |++|||++||.
T Consensus       130 l~~A~rk~Glk  140 (450)
T 2wvv_A          130 LVKAYNDEGID  140 (450)
T ss_dssp             HHHHHHHTTCE
T ss_pred             HHHHHHHcCCe
Confidence            99999999984

>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron}

Probab=99.97  E-value=1.1e-31  Score=220.34  Aligned_cols=76  Identities=26%  Similarity=0.458  Sum_probs=69.2

Q ss_pred             ChHHh-hccCCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccC---CCCCchHHHHHHHHhhcCC
Q psy1381          23 TYQDF-AKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDI---GPKRDLVDYTFGNWFTGGS   98 (102)
Q Consensus        23 ~Y~~~-a~~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~---~p~rDiv~el~~a~~~~Gl   98 (102)
                      +|.+. ++.|+|++|||++||+++|+|||||+|||+|||||||||||+++ +||+++.   +|+||||+||++|||++||
T Consensus        40 g~~~~~~~~F~p~~fd~~~w~~~~k~aGaky~v~takHHdGf~lw~S~~t-~~~~~~~p~~~~k~Div~e~~~A~r~~Gl  118 (469)
T 3eyp_A           40 GDGKASTAIFNPTALDCRQWMQTLKAAGIPAAILTAKHADGFCLWPSKYT-DYSVKNAAWKNGKGDVVREFVDACEEYGL  118 (469)
T ss_dssp             CCSCSCGGGCCCSSCCHHHHHHHHHHTTCCEEEEEEECTTCCBSSCCTTC-SSBGGGSSGGGGTCCHHHHHHHHHHHHTC
T ss_pred             CCCCcChhhCCcccCCHHHHHHHHHHcCCCEEEEEEEeCCCccccCCCCC-CcccccCcccCCCCCHHHHHHHHHHHcCC
Confidence            55554 67999999999999999999999999999999999999999999 6888764   4689999999999999998


Q ss_pred             C
Q psy1381          99 P   99 (102)
Q Consensus        99 ~   99 (102)
                      .
T Consensus       119 ~  119 (469)
T 3eyp_A          119 K  119 (469)
T ss_dssp             E
T ss_pred             e
Confidence            4

>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A*

Probab=99.96  E-value=2.1e-30  Score=213.42  Aligned_cols=78  Identities=29%  Similarity=0.487  Sum_probs=67.6

Q ss_pred             CCCChH-HhhccCCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCC----CCchHHHHHHHHh
Q psy1381          20 PGFTYQ-DFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGP----KRDLVDYTFGNWF   94 (102)
Q Consensus        20 ~~~~Y~-~~a~~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p----~rDiv~el~~a~~   94 (102)
                      .++.+. +.++.|+|++|||++||+++|+|||||+|||+|||||||||||+++ +|++ ..+|    +||||+||++|||
T Consensus        45 ~eW~~g~~~~~~F~p~~fd~~~W~~~~k~aGakyvvlt~kHHdGF~lw~S~~t-~~~v-~~~p~~~~krDiv~el~~A~r  122 (478)
T 3ues_A           45 REWGLGHEDPALFNPRNVDVDQWMDALVAGGMAGVILTCKHHDGFCLWPSRLT-RHTV-ASSPWREGKGDLVREVSESAR  122 (478)
T ss_dssp             CSSCCSCCCGGGCCCSSCCHHHHHHHHHHTTCSEEEEEEECTTCCBSSCCTTC-SCBG-GGSSGGGGTCCHHHHHHHHHH
T ss_pred             ccccCCCCChhhCCcccCCHHHHHHHHHHcCCCEEEEeEEecCCccccCCCCC-Cccc-ccCCccCCCCCHHHHHHHHHH
Confidence            344443 3578999999999999999999999999999999999999999999 5654 4444    6999999999999


Q ss_pred             hcCCC
Q psy1381          95 TGGSP   99 (102)
Q Consensus        95 ~~Gl~   99 (102)
                      ++||.
T Consensus       123 ~~gl~  127 (478)
T 3ues_A          123 RHGLK  127 (478)
T ss_dssp             HTTCE
T ss_pred             HcCCe
Confidence            99984

>3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomic center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.96  E-value=6.9e-30  Score=208.94  Aligned_cols=70  Identities=23%  Similarity=0.416  Sum_probs=65.1

Q ss_pred             ccCCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCccccc---CCCCCchHHHHHHHHhhcCCC
Q psy1381          29 KDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMD---IGPKRDLVDYTFGNWFTGGSP   99 (102)
Q Consensus        29 ~~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~---~~p~rDiv~el~~a~~~~Gl~   99 (102)
                      +.|+|++|||++||+++++|||||+|||+|||||||||||+++ +||++.   .+|+||||+||++|||++||.
T Consensus        52 ~~f~~~~fd~~~w~~~~k~aGaky~v~t~kHHdGf~lw~s~~t-~~~~~~sp~~~~~~D~v~e~~~A~r~~gl~  124 (443)
T 3gza_A           52 NIFNPTELNTDQWVQAAKAAGCKFAVLTATHETGFGLWQSDVN-PYCLKAVKWRDGKGDIVRDFVNSCRKYGLQ  124 (443)
T ss_dssp             GGCCCTTCCHHHHHHHHHTTTCSEEEEESCCSSCCBSSCCSSC-SSBGGGSSGGGGTCCHHHHHHHHHHHHTCE
T ss_pred             hcCChhhCCHHHHHHHHHHcCCCEEEEeeEeCCCcccCCCCCC-CcccccCCccCCCcCHHHHHHHHHHHcCCe
Confidence            5899999999999999999999999999999999999999999 687654   467899999999999999984

>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}

Probab=99.70  E-value=8.1e-18  Score=133.87  Aligned_cols=70  Identities=17%  Similarity=0.220  Sum_probs=60.8

Q ss_pred             hccCCCCCCCHHHHHHH---HHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381          28 AKDFTAEFFDANHWADI---LASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP   99 (102)
Q Consensus        28 a~~F~p~~fDp~~Wa~l---~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~   99 (102)
                      ......++|||++|.++   +|++||+|||||++||+|||+|||+++.  +.....|++|||++++++|+++||.
T Consensus        43 ~~d~~~qnWd~~eW~~~~~~mK~~GikyvIl~~~~~~gf~~~pS~~~~--~~~~~~p~~Dlv~~~l~aa~k~Gmk  115 (340)
T 4h41_A           43 SHDIPHQNWGEKEWDLDFQHMKRIGIDTVIMIRSGYRKFMTYPSPYLL--KKGCYMPSVDLVDMYLRLAEKYNMK  115 (340)
T ss_dssp             CSSSCCCCCCHHHHHHHHHHHHHTTCCEEEESCSEETTEESSCCHHHH--HTTCCCCSBCHHHHHHHHHHHTTCE
T ss_pred             cCCCcccCCCHHHHHHHHHHHHHcCCCEEEEEEEeeCCeeccCccccc--ccCccCCcccHHHHHHHHHHHhCCe
Confidence            44667789999999655   5799999999999999999999999872  3555678999999999999999984

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	102
d1hl9a2	350	c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, ca	2e-20

>d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 350

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Putative alpha-L-fucosidase, catalytic domain
domain: Putative alpha-L-fucosidase, catalytic domain
species: Thermotoga maritima [TaxId: 2336]

 Score = 81.0 bits (199), Expect = 2e-20
 Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 1/81 (1%)

Query: 6   PNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTL 65
             S   ++  + Y   F Y+ FA  FTAE +D   WAD+   +GAKYV+ T+KHH+G+ L
Sbjct: 69  KESPTWEYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCL 128

Query: 66  WPSKYAFSWNSMDIGPKRDLV 86
           W +KY   +NS+  GPKRDLV
Sbjct: 129 WGTKYT-DFNSVKRGPKRDLV 148

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	102
d1hl9a2	350	Putative alpha-L-fucosidase, catalytic domain {The	100.0
d1kwga2	393	A4 beta-galactosidase {Thermus thermophilus [TaxId	92.85
d2aaaa2	381	Fungal alpha-amylases {Aspergillus niger, acid amy	85.28
d2guya2	381	Fungal alpha-amylases {Aspergillus oryzae, Taka-am	83.24
d1eh9a3	400	Glycosyltrehalose trehalohydrolase, central domain	81.76
d1uuqa_	410	Exomannosidase {Cellvibrio mixtus [TaxId: 39650]}	81.48
d1ht6a2	347	Plant alpha-amylase {Barley (Hordeum vulgare), AMY	80.3

>d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Putative alpha-L-fucosidase, catalytic domain
domain: Putative alpha-L-fucosidase, catalytic domain
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.2e-40  Score=261.77  Aligned_cols=94  Identities=40%  Similarity=0.717  Sum_probs=90.3

Q ss_pred             CCChHHHHHHHHhCCCCCChHHhhccCCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCc
Q psy1381           5 NPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRD   84 (102)
Q Consensus         5 ~~~~~y~~~~~~~~~~~~~Y~~~a~~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rD   84 (102)
                      .|.+++.+||.++||++++|++++++|+|++|||+|||++||+|||||+|||||||||||||||+++ +||+++.+++||
T Consensus        68 ~~~~~~~~~h~~~yg~~~~Y~~~~~~Fnp~~fDa~~Wv~~ak~aGaky~vlTaKHHDGF~Lw~S~~t-~~n~~~~~~~rD  146 (350)
T d1hl9a2          68 IKESPTWEYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYT-DFNSVKRGPKRD  146 (350)
T ss_dssp             STTSHHHHHHHHHTCTTCCGGGHHHHCCCTTCCHHHHHHHHHHTTCSEEEEEEECTTCCBSSCCSSC-SCBTTTSTTCSC
T ss_pred             CCCCcchhhhhhcCCCCccHHHHHHHhhcccCCHHHHHHHHHHcCCCEEEEEEEecCCcccCCCCCC-CCCCcCCCCCCc
Confidence            3567889999999999999999999999999999999999999999999999999999999999999 799999999999


Q ss_pred             hHHHHHHHHhhcCCC
Q psy1381          85 LVDYTFGNWFTGGSP   99 (102)
Q Consensus        85 iv~el~~a~~~~Gl~   99 (102)
                      ||+||++|||++||.
T Consensus       147 iv~el~~A~rk~Glk  161 (350)
T d1hl9a2         147 LVGDLAKAVREAGLR  161 (350)
T ss_dssp             HHHHHHHHHHHTTCE
T ss_pred             hHHHHHHHHHhcCCc
Confidence            999999999999984

>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: A4 beta-galactosidase
species: Thermus thermophilus [TaxId: 274]

Probab=92.85  E-value=0.033  Score=37.80  Aligned_cols=55  Identities=16%  Similarity=0.367  Sum_probs=39.0

Q ss_pred             CCCCCCCHHHH---HHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCC---CCchHHHHHHHHhhcCCC
Q psy1381          31 FTAEFFDANHW---ADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGP---KRDLVDYTFGNWFTGGSP   99 (102)
Q Consensus        31 F~p~~fDp~~W---a~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p---~rDiv~el~~a~~~~Gl~   99 (102)
                      ..|+.+|++.|   ++++|++|++.+=+...              .|.-+...+   .-+-+..+++.|+++||.
T Consensus         6 ~~p~~~~~~~~~~D~~~~~~~G~n~vR~~i~--------------~W~~iep~~G~~~~~~~d~~i~~~~~~Gi~   66 (393)
T d1kwga2           6 YYPEHWPKERWKEDARRMREAGLSHVRIGEF--------------AWALLEPEPGRLEWGWLDEAIATLAAEGLK   66 (393)
T ss_dssp             CCGGGSCHHHHHHHHHHHHHHTCCEEEECTT--------------CHHHHCSBTTBCCCHHHHHHHHHHHTTTCE
T ss_pred             cCcccCCHHHHHHHHHHHHHcCCCEEEeccc--------------chhhcCCCCCccCHHHHHHHHHHHHHCCCE
Confidence            36788999999   99999999999964320              122222112   236778899999999983

>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Fungal alpha-amylases
species: Aspergillus niger, acid amylase [TaxId: 5061]

Probab=85.28  E-value=0.35  Score=34.83  Aligned_cols=60  Identities=8%  Similarity=-0.025  Sum_probs=38.2

Q ss_pred             HHHHHHHHHcCCCeEEEeeeec-------CCcccCCCCCCCCcccccC-CCCCchHHHHHHHHhhcCCC
Q psy1381          39 NHWADILASSGAKYVVLTSKHH-------EGYTLWPSKYAFSWNSMDI-GPKRDLVDYTFGNWFTGGSP   99 (102)
Q Consensus        39 ~~Wa~l~k~aGakyvvlTtKHH-------dGF~lW~S~~~~~~~s~~~-~p~rDiv~el~~a~~~~Gl~   99 (102)
                      .+-++-++++|++.|.|+-=+.       +|-.-|.-... ++..++. -...+-+++|+++|+++||.
T Consensus        46 ~~kLdyL~~LGv~~I~L~Pi~~~~~~~~~~~~~~~gY~~~-d~~~id~~~Gt~~~~k~lv~~aH~~Gi~  113 (381)
T d2aaaa2          46 IDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQ-KIYDVNSNFGTADNLKSLSDALHARGMY  113 (381)
T ss_dssp             HHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEE-EEEEECTTTCCHHHHHHHHHHHHTTTCE
T ss_pred             HHHHHHHHHcCCCEEEeCCCccCCccCCCCCCCCcccccc-cccccccccCCHHHHHHHHHHHhhhhhc
Confidence            4556789999999998876442       22222222222 2223332 22578899999999999984

>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Fungal alpha-amylases
species: Aspergillus oryzae, Taka-amylase [TaxId: 5062]

Probab=83.24  E-value=0.53  Score=33.72  Aligned_cols=59  Identities=12%  Similarity=-0.035  Sum_probs=36.9

Q ss_pred             HHHHHHHHcCCCeEEEeeeec--CCcc-----cCCCCCCCCcccccCC-CCCchHHHHHHHHhhcCCC
Q psy1381          40 HWADILASSGAKYVVLTSKHH--EGYT-----LWPSKYAFSWNSMDIG-PKRDLVDYTFGNWFTGGSP   99 (102)
Q Consensus        40 ~Wa~l~k~aGakyvvlTtKHH--dGF~-----lW~S~~~~~~~s~~~~-p~rDiv~el~~a~~~~Gl~   99 (102)
                      +-++-++++|++.|.|+-=+-  .+-+     -|.-..+ +|..++.. ...+=+++|+++|+++||.
T Consensus        47 ~~Ldyl~~LGv~~I~L~Pi~~~~~~~~~~~~~~~gY~~~-d~~~vd~~~Gt~~dfk~lv~~~H~~Gi~  113 (381)
T d2guya2          47 DKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQ-DIYSLNENYGTADDLKALSSALHERGMY  113 (381)
T ss_dssp             HTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEE-EEEEECTTSCCHHHHHHHHHHHHHTTCE
T ss_pred             HhHHHHHHCCCCEEEeCCCCCCCcccCCCCCCCCCcccc-cccccccCCCCHHHHHHHHHHHHhhccc
Confidence            446788999999999975332  2222     2222222 22233222 2467899999999999983

>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Glycosyltrehalose trehalohydrolase, central domain
species: Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]

Probab=81.76  E-value=1.6  Score=30.52  Aligned_cols=56  Identities=11%  Similarity=0.043  Sum_probs=33.7

Q ss_pred             HHHHHHcCCCeEEEeeeec-CCcccCCCCCCCCcccccCC-CCCchHHHHHHHHhhcCC
Q psy1381          42 ADILASSGAKYVVLTSKHH-EGYTLWPSKYAFSWNSMDIG-PKRDLVDYTFGNWFTGGS   98 (102)
Q Consensus        42 a~l~k~aGakyvvlTtKHH-dGF~lW~S~~~~~~~s~~~~-p~rDiv~el~~a~~~~Gl   98 (102)
                      ++-++++|++.|-|+-=+- .+-.-|--... +|..++.. ...|=+++|+++|+++||
T Consensus        35 ldyi~~LGv~~i~l~Pv~~~~~~~~~GY~~~-d~~~vd~~~Gt~~dlk~lv~~~h~~gi   92 (400)
T d1eh9a3          35 LDYLKDLGITAIEIMPIAQFPGKRDWGYDGV-YLYAVQNSYGGPEGFRKLVDEAHKKGL   92 (400)
T ss_dssp             HHHHHHHTCCEEEECCCBCCSSSCCCSTTCC-CTTCBCSTTCCHHHHHHHHHHHHHTTC
T ss_pred             hHHHHHcCCCEEEeCCcCcCCCCCCCCCCCC-CCCCcCcccCCHHHHHHHHHHHHhcCC
Confidence            4679999999999985431 11111111112 23233321 145668999999999998

>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Exomannosidase
species: Cellvibrio mixtus [TaxId: 39650]

Probab=81.48  E-value=3.1  Score=28.19  Aligned_cols=53  Identities=11%  Similarity=-0.056  Sum_probs=32.2

Q ss_pred             HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCC--CCcccccCCC------CCchHHHHHHHHhhcCC
Q psy1381          39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYA--FSWNSMDIGP------KRDLVDYTFGNWFTGGS   98 (102)
Q Consensus        39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~--~~~~s~~~~p------~rDiv~el~~a~~~~Gl   98 (102)
                      +++++++|++|++.|=+-  |+     |+....  ..|......+      ....+.+++++|+++||
T Consensus        44 ~~~l~~~k~~G~N~iR~~--~~-----~~~~~~~~~~~~~~~~~~g~~de~gl~~~d~~l~~a~~~Gi  104 (410)
T d1uuqa_          44 AKELDNLKAIGVNNLRVL--AV-----SEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDM  104 (410)
T ss_dssp             HHHHHHHHHTTCCEEEEE--CC-----CBCCCSTTSCSSCSBSSTTCBCHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHCCCcEEEeC--Cc-----ccccccccccCCCcccccccccHHHHHHHHHHHHHHHHcCC
Confidence            667899999999988653  22     222111  0111112122      13567899999999998

>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Plant alpha-amylase
species: Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]

Probab=80.30  E-value=1.7  Score=29.33  Aligned_cols=56  Identities=16%  Similarity=0.088  Sum_probs=35.3

Q ss_pred             HHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccC--CCCCchHHHHHHHHhhcCCC
Q psy1381          42 ADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDI--GPKRDLVDYTFGNWFTGGSP   99 (102)
Q Consensus        42 a~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~--~p~rDiv~el~~a~~~~Gl~   99 (102)
                      ++-++++|.+.|.|+--+- +..-|-=... +|..++.  -...|=+++|+++|+++||-
T Consensus        27 Ldyl~~lGv~~i~L~Pi~~-~~~~~gY~~~-d~~~id~~~~G~~~~f~~lv~~~H~~gi~   84 (347)
T d1ht6a2          27 VDDIAAAGVTHVWLPPPSH-SVSNEGYMPG-RLYDIDASKYGNAAELKSLIGALHGKGVQ   84 (347)
T ss_dssp             HHHHHHTTCCEEEECCCSC-BSSTTSSSBC-CTTCGGGCTTCCHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHcCCCEEEECCCCc-CCCCCCCCcc-CcCcCCcccCCCHHHHHHHHHHHhhcceE
Confidence            4567999999999986542 2221211112 2333332  22457789999999999983