Psyllid ID: psy13863


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-
MATKCESYEIELWKINASTSHILASQCSELPDCDKSNSECDFCRYSTKLKIPHLPEMVFAGNILKLSHAGGCSLEFNAFDALSSVIVGEMPLQIACSEAWKSSRRSTGFTESHIHPFDWTYSTDYAGTLVGDWAIEKTSLQIDLEKLKQREKIHFYQDLILYEDELHDNGIAKCSVKIRVMSSGFFILLRFFLRVDDVLVRMNDTRLYHEYKNNFVLREISTRQASVKELRIPQSMISDEEPNLVNMLPLIKSETHKLMFQ
ccccccEEEEccEEEEEEEcccccccccccccccccccccHHHHHHHHccccccccEEEcccEEEEEEccccEEEEcHHHHHHHHHcccccEEEEccHHHHccccccccccccccccccEEEcccccccccccccccccccccHHHHcccccccccccccHHccccccccEEEEEEEEEEcccHHHHHHHcEEEEccEEEEEEcEEEEEEccccEEEEEEEEEEcccccccccccccccccccHHcccccEEEEEEEEEEc
cccccccEEEccEEEEEEEcccccccccccccccccccHHHHHHHHHHccccccccHEccccEEEEEEccccEEEEcHHHHHHHHccccccEEEcHHHHHHHHcccccccccEEccccEEEEcccccccccccccccccccccHHHHHccccEEEEccEEEEHHHHccccEEEEEEEEEEccccEEEEEEEEEEEccEEEEEEcEEEEEEccccEEEEEEccccccHHHHccccHHcccccHHHHHccccEEEEEEEEEEc
MATKCESYEIELWKINASTSHIlasqcselpdcdksnsecdfcrystklkiphlpemvfAGNILKlshaggcslefnafDALSSVIVGEMPLQIACSEAWkssrrstgfteshihpfdwtystdyagtlvgdwaieKTSLQIDLEKLKQREKIHFYQDLILYedelhdngiakCSVKIRVMSSGFFILLRFFLRVDDVLVrmndtrlyheyknNFVLREISTRQASVkelripqsmisdeepnlvnmlpliksethklmfq
MATKCESYEIELWKINASTSHILASQCSELPDCDKSNSECDFCRYSTKLKIPHLPEMVFAGNILKLSHAGGCSLEFNAFDALSSVIVGEMPLQIACSEAWKSSRRSTGFTESHIHPFDWTYSTDYAGTLVGDWAIEKTSLQIDLEKLKQREKIHFYQDLILYEDELHDNGIAKCSVKIRVMSSGFFILLRFFLRVDDVLVRMNDTRlyheyknnfvlreiSTRQASVKELripqsmisdeepnlvnmlpliksethklmfq
MATKCESYEIELWKINASTSHILASQCSELPDCDKSNSECDFCRYSTKLKIPHLPEMVFAGNILKLSHAGGCSLEFNAFDALSSVIVGEMPLQIACSEAWKSSRRSTGFTESHIHPFDWTYSTDYAGTLVGDWAIEKTSLQIDLEKLKQREKIHFYQDLILYEDELHDNGIAKCSVKIRVMSSGFFILLRFFLRVDDVLVRMNDTRLYHEYKNNFVLREISTRQASVKELRIPQSMISDEEPNLVNMLPLIKSETHKLMFQ
******SYEIELWKINASTSHILASQCSELPDCDKSNSECDFCRYSTKLKIPHLPEMVFAGNILKLSHAGGCSLEFNAFDALSSVIVGEMPLQIACSEAWKSSRRSTGFTESHIHPFDWTYSTDYAGTLVGDWAIEKTSLQIDLEKLKQREKIHFYQDLILYEDELHDNGIAKCSVKIRVMSSGFFILLRFFLRVDDVLVRMNDTRLYHEYKNNFVLREISTR**************************************
****CES*EIELWKINASTSHILASQCS****CDKSNSECDFCRYSTKLKIPHLPEMVFAGNILKLSHAGGCSLEFNAFDALSSVIVGEMPLQ**********************PFDWTYSTDYAGTLVGDWAIEKTSLQIDLEKLKQREKIHFYQDLILYEDELHDNGIAKCSVKIRVMSSGFFILLRFFLRVDDVLVRMNDTRLYHEYKNNFVLREISTRQASVKELRIPQSMISDEEPNLVNMLPLIKSETHKLMFQ
MATKCESYEIELWKINASTSHILASQCSELPDCDKSNSECDFCRYSTKLKIPHLPEMVFAGNILKLSHAGGCSLEFNAFDALSSVIVGEMPLQIACS************TESHIHPFDWTYSTDYAGTLVGDWAIEKTSLQIDLEKLKQREKIHFYQDLILYEDELHDNGIAKCSVKIRVMSSGFFILLRFFLRVDDVLVRMNDTRLYHEYKNNFVLREISTRQASVKELRIPQSMISDEEPNLVNMLPLIKSETHKLMFQ
*****ESYEIELWKINASTSHILASQCSELPDCDKSNSECDFCRYSTKLKIPHLPEMVFAGNILKLSHAGGCSLEFNAFDALSSVIVGEMPLQIACSEAWKSSRRSTGFTESHIHPFDWTYSTDYAGTLVGDWAIEKTSLQIDLEKLKQREKIHFYQDLILYEDELHDNGIAKCSVKIRVMSSGFFILLRFFLRVDDVLVRMNDTRLYHEYKNNFVLREISTRQASVKELRIPQSMISDEEPNLVNMLPLIKSETHKLMFQ
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATKCESYEIELWKINASTSHILASQCSELPDCDKSNSECDFCRYSTKLKIPHLPEMVFAGNILKLSHAGGCSLEFNAFDALSSVIVGEMPLQIACSEAWKSSRRSTGFTESHIHPFDWTYSTDYAGTLVGDWAIEKTSLQIDLEKLKQREKIHFYQDLILYEDELHDNGIAKCSVKIRVMSSGFFILLRFFLRVDDVLVRMNDTRLYHEYKNNFVLREISTRQASVKELRIPQSMISDEEPNLVNMLPLIKSETHKLMFQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query261 2.2.26 [Sep-21-2011]
Q5FW12273 TIP41-like protein OS=Xen yes N/A 0.888 0.849 0.415 2e-54
Q8BH58271 TIP41-like protein OS=Mus yes N/A 0.888 0.856 0.438 2e-49
A2VCX1271 TIP41-like protein OS=Rat yes N/A 0.888 0.856 0.438 2e-49
O75663272 TIP41-like protein OS=Hom yes N/A 0.888 0.852 0.438 2e-49
Q6IRA8259 TIP41-like protein OS=Xen N/A N/A 0.888 0.895 0.415 4e-47
P34274281 TIP41-like protein OS=Cae yes N/A 0.862 0.800 0.396 2e-40
Q54MI6274 TIP41-like protein OS=Dic yes N/A 0.888 0.846 0.330 1e-31
Q12199356 Type 2A phosphatase activ yes N/A 0.766 0.561 0.386 1e-27
Q9USK5252 Type 2A phosphatase activ yes N/A 0.915 0.948 0.294 7e-23
>sp|Q5FW12|TIPRL_XENTR TIP41-like protein OS=Xenopus tropicalis GN=tiprl PE=2 SV=1 Back     alignment and function desciption
 Score =  212 bits (540), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 105/253 (41%), Positives = 164/253 (64%), Gaps = 21/253 (8%)

Query: 13  WKINASTSHILASQCSELPDCDKSNSECDFCRYSTKLKIPHLPEMVFAGNILKLSHAGGC 72
           W++ A  +HI+ S  +E              + + ++ +P LPEM+F  N+L++ H  G 
Sbjct: 18  WQLTAIKTHIMKSADAE--------------KLAEEMSMPCLPEMMFGDNVLRIQHTSGF 63

Query: 73  SLEFNAFDALSSVIVGEMPLQIACSEAWKSSRRSTGFTESHIHPFDWTYSTDYAGTLVGD 132
            +EFNA DAL  V   +  L++AC+E W+ SR  +   +  + P+DWTY+TDY GTL+GD
Sbjct: 64  GIEFNAKDALKVVKSNQASLKVACAEEWQESRSDSEHNKEVVKPYDWTYTTDYKGTLLGD 123

Query: 133 ---WAIEKTSLQIDLEKLKQREKIHFYQDLILYEDELHDNGIAKCSVKIRVMSSGFFILL 189
                +  T+ +I+ EKLK RE+I F+++++L+EDELHD+G++  SVKIRVM + FF+LL
Sbjct: 124 NMKLNVIPTTDKINTEKLKAREQIMFFEEVLLFEDELHDHGVSSLSVKIRVMPTSFFLLL 183

Query: 190 RFFLRVDDVLVRMNDTRLYHEYKNNFVLREISTRQASVKEL-RIPQSMISDEEPNLVNM- 247
           R+FLRVD VL+RMNDTRLYHE    F+LRE +++++ +  L  +P  + +  EPN ++  
Sbjct: 184 RYFLRVDGVLIRMNDTRLYHEADKTFMLREYTSKESKISNLSHVPPPLYT--EPNEISQY 241

Query: 248 LPLIKSETHKLMF 260
           LP+ ++   KL F
Sbjct: 242 LPVTQTIYEKLEF 254




May be a regulator of serine/threonine-protein phosphatase 2A (PP2A).
Xenopus tropicalis (taxid: 8364)
>sp|Q8BH58|TIPRL_MOUSE TIP41-like protein OS=Mus musculus GN=Tiprl PE=2 SV=1 Back     alignment and function description
>sp|A2VCX1|TIPRL_RAT TIP41-like protein OS=Rattus norvegicus GN=Tiprl PE=2 SV=1 Back     alignment and function description
>sp|O75663|TIPRL_HUMAN TIP41-like protein OS=Homo sapiens GN=TIPRL PE=1 SV=2 Back     alignment and function description
>sp|Q6IRA8|TIPRL_XENLA TIP41-like protein OS=Xenopus laevis GN=tiprl PE=2 SV=1 Back     alignment and function description
>sp|P34274|TIPRL_CAEEL TIP41-like protein OS=Caenorhabditis elegans GN=C02C2.6 PE=3 SV=3 Back     alignment and function description
>sp|Q54MI6|TIPRL_DICDI TIP41-like protein OS=Dictyostelium discoideum GN=tiprl PE=3 SV=1 Back     alignment and function description
>sp|Q12199|TIP41_YEAST Type 2A phosphatase activator TIP41 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TIP41 PE=1 SV=1 Back     alignment and function description
>sp|Q9USK5|TIP41_SCHPO Type 2A phosphatase activator tip41 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tip41 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query261
242009371283 conserved hypothetical protein [Pediculu 0.988 0.911 0.535 2e-78
383859842311 PREDICTED: TIP41-like protein-like [Mega 0.938 0.787 0.512 2e-69
350416634313 PREDICTED: TIP41-like protein-like [Bomb 0.942 0.785 0.501 3e-69
307207438318 TIP41-like protein [Harpegnathos saltato 0.969 0.795 0.5 3e-69
340722427322 PREDICTED: TIP41-like protein-like [Bomb 0.938 0.760 0.504 7e-69
332027008311 TIP41-like protein [Acromyrmex echinatio 0.938 0.787 0.506 9e-69
307166053318 TIP41-like protein [Camponotus floridanu 0.938 0.770 0.504 6e-67
322795781356 hypothetical protein SINV_10943 [Solenop 0.934 0.685 0.505 9e-67
270005393297 hypothetical protein TcasGA2_TC007443 [T 0.938 0.824 0.484 2e-66
332374634277 unknown [Dendroctonus ponderosae] 0.984 0.927 0.480 2e-65
>gi|242009371|ref|XP_002425461.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212509297|gb|EEB12723.1| conserved hypothetical protein [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 142/265 (53%), Positives = 189/265 (71%), Gaps = 7/265 (2%)

Query: 1   MATKCESYEIELWKINASTSHILASQCSELPDCDKSNSE----CDFCRYSTKLKIPHLPE 56
           +    E +    W++  + SHIL+SQC++   C    +     C FC Y+ KL +PHLP+
Sbjct: 10  LPVNSEQHRFNSWEVKYTKSHILSSQCTQNGTCKPGTTGNDELCLFCMYTHKLDLPHLPD 69

Query: 57  MVFAGNILKLSHAGGCSLEFNAFDALSSVIVGEMPLQIACSEAWKSSRRSTGFTESHIHP 116
           MVF  N L+L+H  GC +EFNA D+LS V  G+M ++IA S +WK SR  TG TES I P
Sbjct: 70  MVFPCNKLQLTHDSGCKIEFNALDSLSRVSNGKMVVKIASSASWKESRSETGHTESVIKP 129

Query: 117 FDWTYSTDYAGTLVGDWAIEKTSLQIDLEKLKQREKIHFYQDLILYEDELHDNGIAKCSV 176
           FDWT+STDY GTL+GDW IE T+++IDL KL Q+EKI FY DL L+EDELHDNG A  SV
Sbjct: 130 FDWTFSTDYQGTLLGDWKIEPTNVKIDLNKLMQKEKILFYNDLTLFEDELHDNGTALLSV 189

Query: 177 KIRVMSSGFFILLRFFLRVDDVLVRMNDTRLYHEYKNNFVLREISTRQASVKELRIPQSM 236
           KIRVM + FFILLRFFLRVD+VL+++NDTRLYHE++NN+++RE + R+A + EL++P ++
Sbjct: 190 KIRVMPTCFFILLRFFLRVDNVLIKINDTRLYHEFENNYIIREYTAREAKIDELKVPSTL 249

Query: 237 ISDEEPN-LVNMLPLIKSETHKLMF 260
           + D  PN +   LPLIK   HKL+ 
Sbjct: 250 LLD--PNEICRHLPLIKESNHKLLI 272




Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859842|ref|XP_003705401.1| PREDICTED: TIP41-like protein-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|350416634|ref|XP_003491028.1| PREDICTED: TIP41-like protein-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|307207438|gb|EFN85153.1| TIP41-like protein [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|340722427|ref|XP_003399607.1| PREDICTED: TIP41-like protein-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|332027008|gb|EGI67104.1| TIP41-like protein [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307166053|gb|EFN60330.1| TIP41-like protein [Camponotus floridanus] Back     alignment and taxonomy information
>gi|322795781|gb|EFZ18460.1| hypothetical protein SINV_10943 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|270005393|gb|EFA01841.1| hypothetical protein TcasGA2_TC007443 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|332374634|gb|AEE62458.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query261
UNIPROTKB|F1NR86275 TIPRL "Uncharacterized protein 0.888 0.843 0.450 2.1e-52
UNIPROTKB|O75663272 TIPRL "TIP41-like protein" [Ho 0.888 0.852 0.446 3.5e-52
MGI|MGI:1915087271 Tiprl "TIP41, TOR signalling p 0.888 0.856 0.446 4.4e-52
RGD|1310442271 Tiprl "TIP41, TOR signaling pa 0.888 0.856 0.446 4.4e-52
UNIPROTKB|E2RJV3272 TIPRL "Uncharacterized protein 0.888 0.852 0.438 5.1e-51
UNIPROTKB|F1RPV1282 TIPRL "Uncharacterized protein 0.888 0.822 0.445 6.5e-51
UNIPROTKB|Q29RT7242 TIPRL "Uncharacterized protein 0.823 0.888 0.463 2.2e-50
ZFIN|ZDB-GENE-040426-1611269 tiprl "TIP41, TOR signaling pa 0.888 0.862 0.430 4.6e-50
WB|WBGene00022803281 ZK688.9 [Caenorhabditis elegan 0.862 0.800 0.396 2.9e-39
ASPGD|ASPL0000000230280 AN5814 [Emericella nidulans (t 0.781 0.728 0.403 2.4e-35
UNIPROTKB|F1NR86 TIPRL "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 114/253 (45%), Positives = 168/253 (66%)

Query:    13 WKINASTSHILASQCSELPDCDKSNSECDFCRYSTKLKIPHLPEMVFAGNILKLSHAGGC 72
             WK++A  +HI+ S  +E              R + +L +P LPEM+F  NIL++ H  G 
Sbjct:    18 WKLSAVCTHIMKSAQAE--------------RLAEELHMPSLPEMMFGDNILRIQHEHGF 63

Query:    73 SLEFNAFDALSSVIVGEMPLQIACSEAWKSSRRSTGFTESHIHPFDWTYSTDYAGTLVGD 132
              +EFNA DAL  V   +  +++AC+E W+ SR  T  T+  + P+DWTY+TDY GTL+GD
Sbjct:    64 GIEFNATDALKCVNNCQGMIKVACAEEWQESRSETEHTKEVVKPYDWTYTTDYKGTLLGD 123

Query:   133 WAIEK---TSLQIDLEKLKQREKIHFYQDLILYEDELHDNGIAKCSVKIRVMSSGFFILL 189
              A  K   T+  I+ EKLK RE+I F+++++L+EDELHD+G++  SVKIRVM S FF+LL
Sbjct:   124 TATLKVVPTTEHINTEKLKAREQIMFFEEVLLFEDELHDHGVSSLSVKIRVMPSSFFVLL 183

Query:   190 RFFLRVDDVLVRMNDTRLYHEYKNNFVLREISTRQASVKELR-IPQSMISDEEPNLVNM- 247
             RFFLRVD VL+RMNDTRL+HE    ++LRE ++R++ +  L+ +P S+ +  EPN ++  
Sbjct:   184 RFFLRVDGVLIRMNDTRLHHESDKAYMLREYTSRESKISSLKHVPPSLFT--EPNEISQY 241

Query:   248 LPLIKSETHKLMF 260
             LP+ ++   KL F
Sbjct:   242 LPIKETICEKLEF 254




GO:0000077 "DNA damage checkpoint" evidence=IEA
GO:0034048 "negative regulation of protein phosphatase type 2A activity" evidence=IEA
UNIPROTKB|O75663 TIPRL "TIP41-like protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1915087 Tiprl "TIP41, TOR signalling pathway regulator-like (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1310442 Tiprl "TIP41, TOR signaling pathway regulator-like (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E2RJV3 TIPRL "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1RPV1 TIPRL "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q29RT7 TIPRL "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1611 tiprl "TIP41, TOR signaling pathway regulator-like (S. cerevisiae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
WB|WBGene00022803 ZK688.9 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ASPGD|ASPL0000000230 AN5814 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A2VCX1TIPRL_RATNo assigned EC number0.43870.88880.8560yesN/A
Q5FW12TIPRL_XENTRNo assigned EC number0.41500.88880.8498yesN/A
O75663TIPRL_HUMANNo assigned EC number0.43870.88880.8529yesN/A
Q54MI6TIPRL_DICDINo assigned EC number0.33080.88880.8467yesN/A
Q9USK5TIP41_SCHPONo assigned EC number0.29470.91570.9484yesN/A
P34274TIPRL_CAEELNo assigned EC number0.39650.86200.8007yesN/A
Q8BH58TIPRL_MOUSENo assigned EC number0.43870.88880.8560yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query261
pfam04176180 pfam04176, TIP41, TIP41-like family 4e-83
>gnl|CDD|217939 pfam04176, TIP41, TIP41-like family Back     alignment and domain information
 Score =  246 bits (630), Expect = 4e-83
 Identities = 87/179 (48%), Positives = 121/179 (67%), Gaps = 4/179 (2%)

Query: 57  MVFAGNILKLSHAG-GCSLEFNAFDALSSV-IVGEMPLQIACSEAWKSSRRSTGFTESHI 114
           M+F  N L++ H   G S+EFNA DAL  V   G   L++A ++ W+ SR  T      I
Sbjct: 1   MIFGDNFLRIEHEKSGWSIEFNALDALKLVDKTGLPMLKVAYAKEWQESREKTSSGIEVI 60

Query: 115 HPFDWTYSTDYAGTLVGDWAI--EKTSLQIDLEKLKQREKIHFYQDLILYEDELHDNGIA 172
            PFDWTY+TDY GT+ G   +  E T+ +I +EKLK+R+ I F+ ++IL+EDEL DNGI+
Sbjct: 61  KPFDWTYTTDYKGTVTGASGLLVEPTTERIPIEKLKRRDPILFFDEVILFEDELADNGIS 120

Query: 173 KCSVKIRVMSSGFFILLRFFLRVDDVLVRMNDTRLYHEYKNNFVLREISTRQASVKELR 231
             SVKIRVM S   +LLRFFLRVD+VL R+ DTR+Y E+  ++VLRE + R+A+  +L+
Sbjct: 121 MLSVKIRVMPSRLLLLLRFFLRVDNVLFRIRDTRIYVEFGKDYVLREYTHREATYDKLK 179


The TOR signalling pathway activates a cell-growth program in response to nutrients. TIP41 interacts with TAP42 and negatively regulates the TOR signaling pathway. Length = 180

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 261
KOG3224|consensus278 100.0
PF04176182 TIP41: TIP41-like family ; InterPro: IPR007303 The 100.0
>KOG3224|consensus Back     alignment and domain information
Probab=100.00  E-value=1.2e-88  Score=610.03  Aligned_cols=241  Identities=44%  Similarity=0.732  Sum_probs=218.3

Q ss_pred             cCCeEEEcCeEEEEeeccccccCCCCCCCCCCCcccchhhhhhhhcCCCCCCceeeCCcEEEEEecCceeEEEchhhhHh
Q psy13863          4 KCESYEIELWKINASTSHILASQCSELPDCDKSNSECDFCRYSTKLKIPHLPEMVFAGNILKLSHAGGCSLEFNAFDALS   83 (261)
Q Consensus         4 ~~~~~~~~~W~i~~~k~pIL~s~~~~~~~~~~~~~~~~l~~~~~~L~lp~lPEMvFg~N~l~i~h~~g~~i~Fna~DAL~   83 (261)
                      +.+.++++.|+|.+.++|||+|.|              +|.|+.+|.++++||||||+|+|+|+|..+.+|+|||+|||+
T Consensus        29 ~~~k~s~~~~t~k~~~~~il~s~e--------------l~~~q~elk~~~~PeMvFg~N~l~ie~~~~~sieFna~DALk   94 (278)
T KOG3224|consen   29 KQDKFSFKYWTIKSQRGSILKSHE--------------LENLQSELKGFPLPEMVFGNNYLVIEHKNQPSIEFNALDALK   94 (278)
T ss_pred             cCcCccccceEEEecccchhhHHH--------------HHHHHHhhcCCCCcceeecccEEEEEeCCCCceeecHHHHHH
Confidence            346678888899999999999877              446778888888999999999999999986699999999999


Q ss_pred             hhhcCCC-ceeechhHHHhhcCcCCCCCCccccceeeeeecCcCCcccCCceeecC---cccCChhhhcCcCccccceec
Q psy13863         84 SVIVGEM-PLQIACSEAWKSSRRSTGFTESHIHPFDWTYSTDYAGTLVGDWAIEKT---SLQIDLEKLKQREKIHFYQDL  159 (261)
Q Consensus        84 ~v~~~~~-~~kVa~A~~W~~sr~~~~~~~~~~kpfDWTytT~Y~Gt~~~~~~~~~t---~~~I~~~kL~~~dpILF~~ev  159 (261)
                      +|.++.. +++||||+.|+++|..+ ...++++||||||||+|+||.++ ....+|   +..||++||+++|+||||+|+
T Consensus        95 ~V~~~~~~~veV~~a~~W~~sr~~~-~~~~vi~pfDWTyTT~YqGT~~~-~~~k~t~e~~~~~pl~kL~~~e~ILFy~ei  172 (278)
T KOG3224|consen   95 MVGTKPLPPVEVAAAKDWAKSRKKQ-EEYEVIKPFDWTYTTDYQGTEQR-PNAKFTTEIDQNIPLQKLLNREQILFYDEI  172 (278)
T ss_pred             HhccCCCCCeEeehhHHHHHhccch-hhhccccCccceEecccccceec-cccccccchhccchHHHHhcccCeeeecce
Confidence            9999854 49999999999999986 34689999999999999999987 344443   556888999999999999999


Q ss_pred             eeeccccCCCceEEEEEEEEEcCchHhhhheeeeeecceEEEEeeeeEEEEcCCCeEEEEeeeeecccccc--cCC---C
Q psy13863        160 ILYEDELHDNGIAKCSVKIRVMSSGFFILLRFFLRVDDVLVRMNDTRLYHEYKNNFVLREISTRQASVKEL--RIP---Q  234 (261)
Q Consensus       160 ~LfEDEL~DnG~s~lsVKiRVMp~~~fvL~RffLRVD~VlvRi~DTRiyhef~~~~viRE~~~rE~~~~~l--~~~---~  234 (261)
                      +||||||||||||+|+|||||||++||||+|||||||+||+|++|||||++|++++|||||+.|||+|.+|  +.|   .
T Consensus       173 iLFEDELADnGiS~l~VrvRVM~~~~flLlRf~lRVD~VLvRl~dTRi~~~~~~d~vlrE~~~rEA~y~~l~~~~~~~~~  252 (278)
T KOG3224|consen  173 ILFEDELADNGISMLDVRVRVMPGHLFLLLRFFLRVDKVLVRLNDTRIYIEFLNDFVLRECRKREATYQKLIAKIPVGGD  252 (278)
T ss_pred             eeehhhhhhCCceeEEEEEEEecccchHHHHHHhhccceEEEEeccEEEEEecCCcchhhHHhhhcchhhhhccCccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999  444   3


Q ss_pred             CCCCCchhhhhhcCCceeeeeeeeecC
Q psy13863        235 SMISDEEPNLVNMLPLIKSETHKLMFQ  261 (261)
Q Consensus       235 ~~~~D~~n~v~~~Lpv~~~~~ekl~~~  261 (261)
                      +++.|| ||++++||+++++++||.|+
T Consensus       253 ~~l~D~-~~~se~lPvv~~~~~kl~f~  278 (278)
T KOG3224|consen  253 KLLDDP-NWLSERLPVVKHQIYKLNFK  278 (278)
T ss_pred             ccccCc-HHHHhhCchhhhheeeeccC
Confidence            579999 99999999999999999985



>PF04176 TIP41: TIP41-like family ; InterPro: IPR007303 The TOR signalling pathway activates a cell-growth program in response to nutrients [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00